NJ56_00005 IPR006094 FAD linked oxidase, N-terminal NJ56_00005 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal NJ56_00005 IPR016164 FAD-linked oxidase-like, C-terminal NJ56_00005 IPR016167 FAD-binding, type 2, subdomain 1 NJ56_00005 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 NJ56_00005 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 NJ56_00005 IPR036318 NJ56_00005 NJ56_00010 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal NJ56_00010 IPR012338 Beta-lactamase/transpeptidase-like NJ56_00010 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A NJ56_00015 IPR001611 Leucine-rich repeat NJ56_00015 IPR003591 Leucine-rich repeat, typical subtype NJ56_00015 IPR025875 Leucine rich repeat 4 NJ56_00015 IPR032675 NJ56_00015 NJ56_00020 IPR001269 tRNA-dihydrouridine synthase NJ56_00020 IPR013785 Aldolase-type TIM barrel NJ56_00020 IPR018517 tRNA-dihydrouridine synthase, conserved site NJ56_00020 IPR032886 NJ56_00020 NJ56_00025 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site NJ56_00025 IPR001650 Helicase, C-terminal NJ56_00025 IPR011545 DEAD/DEAH box helicase domain NJ56_00025 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_00025 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_00025 IPR028622 ATP-dependent RNA helicase RhlE NJ56_00030 IPR001647 DNA-binding HTH domain, TetR-type NJ56_00030 IPR009057 Homeodomain-like NJ56_00030 IPR015292 Transcription regulator YbiH, C-terminal NJ56_00030 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NJ56_00030 IPR036271 NJ56_00030 NJ56_00035 IPR032317 NJ56_00035 NJ56_00040 IPR003439 ABC transporter-like NJ56_00040 IPR003593 AAA+ ATPase domain NJ56_00040 IPR017871 ABC transporter, conserved site NJ56_00040 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_00050 IPR000412 ABC-2 transporter NJ56_00055 IPR006214 Bax inhibitor 1-related NJ56_00060 IPR003448 Molybdopterin biosynthesis MoaE NJ56_00060 IPR036563 NJ56_00060 NJ56_00065 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 NJ56_00065 IPR012675 Beta-grasp domain NJ56_00065 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NJ56_00070 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain NJ56_00070 IPR023045 Molybdenum cofactor biosynthesis C NJ56_00070 IPR036522 NJ56_00070 NJ56_00075 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site NJ56_00075 IPR006638 Elongator protein 3/MiaB/NifB NJ56_00075 IPR007197 Radical SAM NJ56_00075 IPR010505 Molybdenum cofactor synthesis C-terminal NJ56_00075 IPR013483 Molybdenum cofactor biosynthesis protein A NJ56_00075 IPR013785 Aldolase-type TIM barrel NJ56_00080 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 NJ56_00080 IPR010119 Gluconeogenesis factor NJ56_00080 IPR038136 NJ56_00080 NJ56_00085 IPR003439 ABC transporter-like NJ56_00085 IPR003593 AAA+ ATPase domain NJ56_00085 IPR017871 ABC transporter, conserved site NJ56_00085 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_00090 IPR000522 ABC transporter, permease protein NJ56_00090 IPR037294 NJ56_00090 NJ56_00095 IPR002491 ABC transporter periplasmic binding domain NJ56_00100 IPR000531 TonB-dependent receptor, beta-barrel NJ56_00100 IPR012910 TonB-dependent receptor, plug NJ56_00100 IPR036942 NJ56_00100 NJ56_00100 IPR037066 NJ56_00100 NJ56_00105 IPR018668 Protein of unknown function DUF2132 NJ56_00105 IPR036361 NJ56_00105 NJ56_00110 IPR001650 Helicase, C-terminal NJ56_00110 IPR001943 UVR domain NJ56_00110 IPR004807 UvrABC system, subunit B NJ56_00110 IPR006935 Helicase/UvrB domain NJ56_00110 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_00110 IPR024759 UvrB, YAD/RRR-motif-containing domain NJ56_00110 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_00110 IPR036876 NJ56_00110 NJ56_00115 IPR003439 ABC transporter-like NJ56_00115 IPR003593 AAA+ ATPase domain NJ56_00115 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_00120 IPR004472 Dethiobiotin synthase BioD NJ56_00120 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_00125 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC NJ56_00125 IPR013216 Methyltransferase type 11 NJ56_00125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_00130 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site NJ56_00130 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type NJ56_00130 IPR004839 Aminotransferase, class I/classII NJ56_00130 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_00130 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_00130 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_00130 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria NJ56_00135 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB NJ56_00135 IPR006638 Elongator protein 3/MiaB/NifB NJ56_00135 IPR007197 Radical SAM NJ56_00135 IPR010722 Biotin and thiamin synthesis-associated domain NJ56_00135 IPR013785 Aldolase-type TIM barrel NJ56_00135 IPR024177 Biotin synthase NJ56_00140 IPR005814 Aminotransferase class-III NJ56_00140 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA NJ56_00140 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_00140 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_00140 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_00145 IPR011045 Nitrous oxide reductase, N-terminal NJ56_00145 IPR015943 WD40/YVTN repeat-like-containing domain NJ56_00145 IPR019405 Lactonase, 7-bladed beta propeller NJ56_00145 IPR022528 6-phosphogluconolactonase, YbhE-type NJ56_00150 IPR000150 Cof protein NJ56_00150 IPR006379 HAD-superfamily hydrolase, subfamily IIB NJ56_00150 IPR023214 HAD-like domain NJ56_00150 IPR036412 NJ56_00150 NJ56_00155 IPR003439 ABC transporter-like NJ56_00155 IPR003593 AAA+ ATPase domain NJ56_00155 IPR004606 Molybdenum-pterin binding NJ56_00155 IPR005116 Transport-associated OB, type 1 NJ56_00155 IPR008995 Molybdate/tungstate binding, C-terminal NJ56_00155 IPR011868 Molybdate ABC transporter, ATP-binding protein NJ56_00155 IPR017871 ABC transporter, conserved site NJ56_00155 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_00160 IPR000515 MetI-like domain NJ56_00160 IPR011867 Molybdate ABC transporter, permease protein NJ56_00160 IPR035906 NJ56_00160 NJ56_00165 IPR005950 Molybdenum ABC transporter, periplasmic binding protein NJ56_00170 IPR019702 Protein of unknown function DUF2592 NJ56_00175 IPR000847 Transcription regulator HTH, LysR NJ56_00175 IPR003725 Molybdenum-binding protein, N-terminal NJ56_00175 IPR004606 Molybdenum-pterin binding NJ56_00175 IPR005116 Transport-associated OB, type 1 NJ56_00175 IPR008995 Molybdate/tungstate binding, C-terminal NJ56_00175 IPR016462 Molybdate-dependent transcriptional regulator, ModE NJ56_00175 IPR036388 NJ56_00175 NJ56_00175 IPR036390 NJ56_00175 NJ56_00180 IPR003675 CAAX amino terminal protease NJ56_00185 IPR005886 UDP-glucose 4-epimerase GalE NJ56_00185 IPR016040 NAD(P)-binding domain NJ56_00185 IPR036291 NJ56_00185 NJ56_00190 IPR001937 Galactose-1-phosphate uridyl transferase, class I NJ56_00190 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal NJ56_00190 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal NJ56_00190 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site NJ56_00190 IPR036265 NJ56_00190 NJ56_00195 IPR000705 Galactokinase NJ56_00195 IPR006203 GHMP kinase, ATP-binding, conserved site NJ56_00195 IPR006204 GHMP kinase N-terminal domain NJ56_00195 IPR006206 Mevalonate/galactokinase NJ56_00195 IPR013750 GHMP kinase, C-terminal domain NJ56_00195 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_00195 IPR019539 Galactokinase galactose-binding domain NJ56_00195 IPR019741 Galactokinase, conserved site NJ56_00195 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_00195 IPR022963 Galactokinase, bacterial NJ56_00195 IPR036554 NJ56_00195 NJ56_00200 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase NJ56_00200 IPR011013 Galactose mutarotase-like domain NJ56_00200 IPR013458 Aldose 1-epimerase, bacterial NJ56_00200 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup NJ56_00200 IPR015443 Aldose 1-epimerase NJ56_00205 IPR011690 Phosphate-starvation-induced PsiF repeat NJ56_00210 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site NJ56_00210 IPR005952 Phosphoglycerate mutase 1 NJ56_00210 IPR013078 Histidine phosphatase superfamily, clade-1 NJ56_00210 IPR029033 Histidine phosphatase superfamily NJ56_00215 IPR006218 DAHP synthetase I/KDSA NJ56_00215 IPR006219 DHAP synthase, class 1 NJ56_00215 IPR013785 Aldolase-type TIM barrel NJ56_00220 IPR000792 Transcription regulator LuxR, C-terminal NJ56_00220 IPR001789 Signal transduction response regulator, receiver domain NJ56_00220 IPR011006 CheY-like superfamily NJ56_00220 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_00225 IPR001638 Extracellular solute-binding protein, family 3 NJ56_00225 IPR001789 Signal transduction response regulator, receiver domain NJ56_00225 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_00225 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_00225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_00225 IPR011006 CheY-like superfamily NJ56_00225 IPR036097 NJ56_00225 NJ56_00225 IPR036641 NJ56_00225 NJ56_00225 IPR036890 NJ56_00225 NJ56_00230 IPR006419 Nicotinamide mononucleotide transporter PnuC NJ56_00235 IPR003473 Quinolinate synthetase A NJ56_00235 IPR023513 Quinolinate synthase A, type 1 NJ56_00235 IPR036094 NJ56_00235 NJ56_00270 IPR011990 Tetratricopeptide-like helical domain NJ56_00270 IPR014162 Tol-Pal system, YbgF NJ56_00270 IPR019734 Tetratricopeptide repeat NJ56_00270 IPR032519 NJ56_00270 NJ56_00270 IPR034706 NJ56_00270 NJ56_00275 IPR006664 Outer membrane protein, bacterial NJ56_00275 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal NJ56_00275 IPR006690 Outer membrane protein, OmpA-like, conserved site NJ56_00275 IPR014169 Peptidoglycan-associated lipoprotein NJ56_00275 IPR036737 NJ56_00275 NJ56_00275 IPR039001 NJ56_00275 NJ56_00280 IPR007195 TolB, N-terminal NJ56_00280 IPR011042 Six-bladed beta-propeller, TolB-like NJ56_00280 IPR011659 WD40-like Beta Propeller NJ56_00280 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB NJ56_00280 IPR036752 NJ56_00280 NJ56_00285 IPR014161 Tol-Pal system, TolA NJ56_00290 IPR003400 Biopolymer transport protein ExbD/TolR NJ56_00290 IPR014168 Biopolymer transport, TolR NJ56_00295 IPR002898 MotA/TolQ/ExbB proton channel NJ56_00295 IPR014163 Tol-Pal system, TolQ NJ56_00300 IPR006683 Thioesterase superfamily NJ56_00300 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family NJ56_00300 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site NJ56_00300 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase NJ56_00300 IPR029069 HotDog domain NJ56_00305 IPR011846 Cyd operon protein YbgE NJ56_00310 IPR011724 Cyd operon protein YbgT NJ56_00310 IPR012994 Membrane bound YbgT-like NJ56_00315 IPR003317 Cytochrome d ubiquinol oxidase, subunit II NJ56_00320 IPR002585 Cytochrome d ubiquinol oxidase, subunit I NJ56_00325 IPR004843 Calcineurin-like phosphoesterase domain, apaH type NJ56_00325 IPR006146 5'-Nucleotidase, conserved site NJ56_00325 IPR006179 5'-Nucleotidase/apyrase NJ56_00325 IPR008334 5'-Nucleotidase, C-terminal NJ56_00325 IPR029052 Metallo-dependent phosphatase-like NJ56_00325 IPR036907 NJ56_00325 NJ56_00330 IPR003781 CoA-binding NJ56_00330 IPR005810 Succinyl-CoA ligase, alpha subunit NJ56_00330 IPR005811 ATP-citrate lyase/succinyl-CoA ligase NJ56_00330 IPR016102 Succinyl-CoA synthetase-like NJ56_00330 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site NJ56_00330 IPR033847 NJ56_00330 NJ56_00330 IPR036291 NJ56_00330 NJ56_00335 IPR005809 Succinyl-CoA synthetase, beta subunit NJ56_00335 IPR005811 ATP-citrate lyase/succinyl-CoA ligase NJ56_00335 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type NJ56_00335 IPR013815 ATP-grasp fold, subdomain 1 NJ56_00335 IPR016102 Succinyl-CoA synthetase-like NJ56_00335 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site NJ56_00340 IPR000089 Biotin/lipoyl attachment NJ56_00340 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain NJ56_00340 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NJ56_00340 IPR004167 E3 binding NJ56_00340 IPR006255 Dihydrolipoamide succinyltransferase NJ56_00340 IPR011053 Single hybrid motif NJ56_00340 IPR023213 Chloramphenicol acetyltransferase-like domain NJ56_00340 IPR036625 NJ56_00340 NJ56_00345 IPR001017 Dehydrogenase, E1 component NJ56_00345 IPR005475 Transketolase-like, pyrimidine-binding domain NJ56_00345 IPR011603 2-oxoglutarate dehydrogenase E1 component NJ56_00345 IPR029061 Thiamin diphosphate-binding fold NJ56_00345 IPR031717 NJ56_00345 NJ56_00345 IPR032106 NJ56_00345 NJ56_00350 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein NJ56_00350 IPR009051 Alpha-helical ferredoxin NJ56_00350 IPR012675 Beta-grasp domain NJ56_00350 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_00350 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal NJ56_00350 IPR036010 NJ56_00350 NJ56_00355 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site NJ56_00355 IPR003953 FAD binding domain NJ56_00355 IPR011281 Succinate dehydrogenase, flavoprotein subunit NJ56_00355 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit NJ56_00355 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal NJ56_00355 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NJ56_00355 IPR036188 NJ56_00355 NJ56_00355 IPR037099 NJ56_00355 NJ56_00360 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor NJ56_00360 IPR034804 NJ56_00360 NJ56_00365 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit NJ56_00365 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit NJ56_00365 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site NJ56_00365 IPR034804 NJ56_00365 NJ56_00370 IPR002020 Citrate synthase-like NJ56_00370 IPR010953 Citrate synthase, type I NJ56_00370 IPR016142 Citrate synthase-like, large alpha subdomain NJ56_00370 IPR016143 Citrate synthase-like, small alpha subdomain NJ56_00370 IPR019810 Citrate synthase active site NJ56_00370 IPR024176 Citrate synthase, bacterial-type NJ56_00370 IPR036969 NJ56_00370 NJ56_00380 IPR000816 Peptidase C15, pyroglutamyl peptidase I NJ56_00380 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like NJ56_00380 IPR029762 Pyroglutamyl peptidase I, bacterial-type NJ56_00380 IPR033694 NJ56_00380 NJ56_00380 IPR036440 NJ56_00380 NJ56_00385 IPR009323 Protein of unknown function DUF979 NJ56_00390 IPR010374 Protein of unknown function DUF969 NJ56_00395 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF NJ56_00395 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NJ56_00400 IPR003778 Allophanate hydrolase subunit 2 NJ56_00400 IPR029000 Cyclophilin-like domain NJ56_00405 IPR003833 Allophanate hydrolase subunit 1 NJ56_00405 IPR010016 Sensor histidine kinase inhibitor, KipI family NJ56_00405 IPR029000 Cyclophilin-like domain NJ56_00410 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NJ56_00410 IPR036069 NJ56_00410 NJ56_00415 IPR000396 Cyclic-AMP phosphodiesterase, class-II NJ56_00415 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site NJ56_00415 IPR036866 NJ56_00415 NJ56_00420 IPR002081 Cryptochrome/DNA photolyase, class 1 NJ56_00420 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal NJ56_00420 IPR006050 DNA photolyase, N-terminal NJ56_00420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_00420 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal NJ56_00420 IPR036134 NJ56_00420 NJ56_00420 IPR036155 NJ56_00420 NJ56_00425 IPR007553 Domain of unknown function DUF523 NJ56_00425 IPR013560 Domain of unknown function DUF1722 NJ56_00425 IPR017087 Uncharacterised conserved protein UCP037004 NJ56_00430 IPR019663 Uncharacterised protein YbfA NJ56_00435 IPR011726 K+ transporting P-type ATPase, F subunit NJ56_00440 IPR004623 Potassium-transporting ATPase A chain NJ56_00445 IPR001757 Cation-transporting P-type ATPase NJ56_00445 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA NJ56_00445 IPR008250 P-type ATPase, A domain NJ56_00445 IPR018303 P-type ATPase, phosphorylation site NJ56_00445 IPR023298 P-type ATPase, transmembrane domain NJ56_00445 IPR023299 P-type ATPase, cytoplasmic domain N NJ56_00445 IPR036412 NJ56_00445 NJ56_00450 IPR003820 Potassium-transporting ATPase C chain NJ56_00455 IPR003018 GAF domain NJ56_00455 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_00455 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_00455 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal NJ56_00455 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_00455 IPR025201 Sensor protein KdpD, transmembrane domain NJ56_00455 IPR029016 GAF domain-like NJ56_00455 IPR036097 NJ56_00455 NJ56_00455 IPR036890 NJ56_00455 NJ56_00455 IPR038318 NJ56_00455 NJ56_00460 IPR001789 Signal transduction response regulator, receiver domain NJ56_00460 IPR001867 Signal transduction response regulator, C-terminal NJ56_00460 IPR011006 CheY-like superfamily NJ56_00460 IPR036388 NJ56_00460 NJ56_00465 IPR000620 Drug/metabolite transporter NJ56_00470 IPR005843 Alpha-D-phosphohexomutase, C-terminal NJ56_00470 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I NJ56_00470 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II NJ56_00470 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III NJ56_00470 IPR005852 Phosphoglucomutase, alpha-D-glucose specific NJ56_00470 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III NJ56_00470 IPR016066 Alpha-D-phosphohexomutase, conserved site NJ56_00470 IPR036900 NJ56_00470 NJ56_00475 IPR005621 Regulation modulator SeqA NJ56_00475 IPR010985 Ribbon-helix-helix NJ56_00475 IPR013321 Arc-type ribbon-helix-helix NJ56_00475 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain NJ56_00475 IPR033761 NJ56_00475 NJ56_00475 IPR036835 NJ56_00475 NJ56_00480 IPR000073 Alpha/beta hydrolase fold-1 NJ56_00480 IPR000639 Epoxide hydrolase-like NJ56_00480 IPR029058 Alpha/Beta hydrolase fold NJ56_00485 IPR002145 Ribbon-helix-helix protein, copG NJ56_00490 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_00490 IPR004090 Chemotaxis methyl-accepting receptor NJ56_00490 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site NJ56_00495 IPR001226 Flavodoxin, conserved site NJ56_00495 IPR008254 Flavodoxin/nitric oxide synthase NJ56_00495 IPR010086 Flavodoxin, long chain NJ56_00495 IPR029039 Flavoprotein-like NJ56_00500 IPR002481 Ferric-uptake regulator NJ56_00500 IPR036388 NJ56_00500 NJ56_00500 IPR036390 NJ56_00500 NJ56_00505 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain NJ56_00505 IPR004867 Chitobiase/beta-hexosaminidase C-terminal domain NJ56_00505 IPR008965 Carbohydrate-binding domain NJ56_00505 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain NJ56_00505 IPR013783 Immunoglobulin-like fold NJ56_00505 IPR014756 Immunoglobulin E-set NJ56_00505 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal NJ56_00505 IPR015883 Glycoside hydrolase family 20, catalytic core NJ56_00505 IPR017853 Glycoside hydrolase, superfamily NJ56_00505 IPR025705 Beta-hexosaminidase NJ56_00505 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NJ56_00510 IPR025727 YbfN-like lipoprotein NJ56_00515 IPR005318 Outer membrane porin, bacterial NJ56_00515 IPR023614 Porin domain NJ56_00520 IPR000924 Glutamyl/glutaminyl-tRNA synthetase NJ56_00520 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NJ56_00520 IPR004514 Glutamine-tRNA synthetase NJ56_00520 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain NJ56_00520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_00520 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain NJ56_00520 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain NJ56_00520 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain NJ56_00520 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain NJ56_00520 IPR022861 Glutamine-tRNA ligase, bacterial NJ56_00525 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 NJ56_00525 IPR001996 Phosphotransferase system, IIB component, type 1 NJ56_00525 IPR003352 Phosphotransferase system, EIIC NJ56_00525 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component NJ56_00525 IPR011055 Duplicated hybrid motif NJ56_00525 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site NJ56_00525 IPR036878 NJ56_00525 NJ56_00530 IPR004547 Glucosamine-6-phosphate isomerase NJ56_00530 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase NJ56_00530 IPR018321 Glucosamine-6-phosphate isomerase, conserved site NJ56_00530 IPR037171 NJ56_00530 NJ56_00535 IPR003764 N-acetylglucosamine-6-phosphate deacetylase NJ56_00535 IPR006680 Amidohydrolase 1 NJ56_00535 IPR011059 Metal-dependent hydrolase, composite domain NJ56_00535 IPR032466 NJ56_00535 NJ56_00540 IPR000600 ROK NJ56_00540 IPR000835 MarR-type HTH domain NJ56_00540 IPR036388 NJ56_00540 NJ56_00540 IPR036390 NJ56_00540 NJ56_00545 IPR006357 HAD-superfamily hydrolase, subfamily IIA NJ56_00545 IPR023214 HAD-like domain NJ56_00545 IPR036412 NJ56_00545 NJ56_00550 IPR001962 Asparagine synthase NJ56_00550 IPR006426 Asparagine synthase, glutamine-hydrolyzing NJ56_00550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_00550 IPR017932 Glutamine amidotransferase type 2 domain NJ56_00550 IPR029055 Nucleophile aminohydrolases, N-terminal NJ56_00585 IPR002938 Monooxygenase, FAD-binding NJ56_00585 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 NJ56_00585 IPR036188 NJ56_00585 NJ56_00590 IPR002792 TRAM domain NJ56_00590 IPR005839 Methylthiotransferase NJ56_00590 IPR006463 tRNA-i(6)A37 modification enzyme MiaB NJ56_00590 IPR006638 Elongator protein 3/MiaB/NifB NJ56_00590 IPR007197 Radical SAM NJ56_00590 IPR013848 Methylthiotransferase, N-terminal NJ56_00590 IPR020612 Methylthiotransferase, conserved site NJ56_00590 IPR023404 Radical SAM, alpha/beta horseshoe NJ56_00590 IPR038135 NJ56_00590 NJ56_00595 IPR003714 PhoH-like protein NJ56_00595 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_00600 IPR002036 Endoribonuclease YbeY NJ56_00600 IPR020549 Endoribonuclease YbeY, conserved site NJ56_00600 IPR023091 Metalloprotease catalytic domain, predicted NJ56_00605 IPR000644 CBS domain NJ56_00605 IPR005170 Transporter-associated domain NJ56_00605 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 NJ56_00605 IPR036318 NJ56_00605 NJ56_00610 IPR003010 Carbon-nitrogen hydrolase NJ56_00610 IPR004563 Apolipoprotein N-acyltransferase NJ56_00610 IPR036526 NJ56_00610 NJ56_00620 IPR001638 Extracellular solute-binding protein, family 3 NJ56_00625 IPR000515 MetI-like domain NJ56_00625 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family NJ56_00625 IPR035906 NJ56_00625 NJ56_00630 IPR000515 MetI-like domain NJ56_00630 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family NJ56_00630 IPR035906 NJ56_00630 NJ56_00635 IPR003439 ABC transporter-like NJ56_00635 IPR003593 AAA+ ATPase domain NJ56_00635 IPR017871 ABC transporter, conserved site NJ56_00635 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_00635 IPR030679 NJ56_00635 NJ56_00640 IPR009912 Protein of unknown function DUF1451 NJ56_00645 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NJ56_00645 IPR002300 Aminoacyl-tRNA synthetase, class Ia NJ56_00645 IPR002302 Leucine-tRNA ligase NJ56_00645 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain NJ56_00645 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding NJ56_00645 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding NJ56_00645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_00645 IPR025709 Leucyl-tRNA synthetase, editing domain NJ56_00650 IPR007485 Lipopolysaccharide assembly, LptE NJ56_00655 IPR005790 DNA polymerase III, delta subunit NJ56_00655 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal NJ56_00655 IPR010372 DNA polymerase III, delta NJ56_00655 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_00655 IPR032780 NJ56_00655 NJ56_00660 IPR004821 Cytidyltransferase-like domain NJ56_00660 IPR005248 Probable nicotinate-nucleotide adenylyltransferase NJ56_00660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_00665 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NJ56_00670 IPR003742 SPOUT methyltransferase, predicted NJ56_00670 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NJ56_00670 IPR029028 Alpha/beta knot methyltransferases NJ56_00675 IPR001460 Penicillin-binding protein, transpeptidase NJ56_00675 IPR005311 Penicillin-binding protein, dimerisation domain NJ56_00675 IPR012338 Beta-lactamase/transpeptidase-like NJ56_00675 IPR017790 Penicillin-binding protein 2 NJ56_00675 IPR036138 NJ56_00675 NJ56_00680 IPR001182 Cell cycle protein FtsW/RodA NJ56_00680 IPR011923 Rod shape-determining protein RodA NJ56_00680 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site NJ56_00685 IPR007730 Sporulation-related domain NJ56_00685 IPR009009 RlpA-like double-psi beta-barrel domain NJ56_00685 IPR012997 Rare lipoprotein A, bacterial NJ56_00685 IPR034718 NJ56_00685 NJ56_00685 IPR036680 NJ56_00685 NJ56_00685 IPR036908 NJ56_00685 NJ56_00690 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal NJ56_00690 IPR012338 Beta-lactamase/transpeptidase-like NJ56_00690 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal NJ56_00690 IPR015956 Penicillin-binding protein-associated NJ56_00690 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A NJ56_00690 IPR037167 NJ56_00690 NJ56_00695 IPR007454 Uncharacterised protein family UPF0250 NJ56_00695 IPR027471 YbeD-like domain NJ56_00700 IPR000544 Octanoyltransferase NJ56_00700 IPR004143 Biotin/lipoate A/B protein ligase NJ56_00700 IPR020605 Octanoyltransferase, conserved site NJ56_00705 IPR003698 Lipoyl synthase NJ56_00705 IPR006638 Elongator protein 3/MiaB/NifB NJ56_00705 IPR007197 Radical SAM NJ56_00705 IPR013785 Aldolase-type TIM barrel NJ56_00705 IPR031691 NJ56_00705 NJ56_00710 IPR003369 Sec-independent protein translocase protein TatA/B/E NJ56_00710 IPR006312 Sec-independent protein translocase protein TatA/E NJ56_00710 IPR024905 Sec-independent protein translocase protein TatE NJ56_00715 IPR000160 GGDEF domain NJ56_00715 IPR007894 MASE2 NJ56_00715 IPR029787 Nucleotide cyclase NJ56_00720 IPR000182 GNAT domain NJ56_00720 IPR016181 Acyl-CoA N-acyltransferase NJ56_00725 IPR003691 Putative fluoride ion transporter CrcB NJ56_00730 IPR002059 Cold-shock protein, DNA-binding NJ56_00730 IPR011129 Cold shock protein NJ56_00730 IPR012156 Cold shock, CspA NJ56_00730 IPR012340 Nucleic acid-binding, OB-fold NJ56_00730 IPR019844 Cold-shock conserved site NJ56_00735 IPR002059 Cold-shock protein, DNA-binding NJ56_00735 IPR012340 Nucleic acid-binding, OB-fold NJ56_00740 IPR000792 Transcription regulator LuxR, C-terminal NJ56_00740 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_00740 IPR036388 NJ56_00740 NJ56_00750 IPR014973 Protein of unknown function DUF1835 NJ56_00750 IPR022123 Protein of unknown function DUF3658 NJ56_00755 IPR010854 Domain of unknown function DUF1471 NJ56_00755 IPR025543 Dodecin-like NJ56_00755 IPR036275 NJ56_00755 NJ56_00760 IPR007339 Protein of unknown function DUF417 NJ56_00760 IPR016865 Uncharacterised conserved protein UCP028065, membrane NJ56_00765 IPR001647 DNA-binding HTH domain, TetR-type NJ56_00765 IPR009057 Homeodomain-like NJ56_00765 IPR036271 NJ56_00765 NJ56_00770 IPR000160 GGDEF domain NJ56_00770 IPR001789 Signal transduction response regulator, receiver domain NJ56_00770 IPR011006 CheY-like superfamily NJ56_00770 IPR029787 Nucleotide cyclase NJ56_00775 IPR000014 PAS domain NJ56_00775 IPR001610 PAC motif NJ56_00775 IPR001789 Signal transduction response regulator, receiver domain NJ56_00775 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_00775 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_00775 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_00775 IPR006189 CHASE NJ56_00775 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NJ56_00775 IPR011006 CheY-like superfamily NJ56_00775 IPR013655 PAS fold-3 NJ56_00775 IPR035965 NJ56_00775 NJ56_00775 IPR036097 NJ56_00775 NJ56_00775 IPR036641 NJ56_00775 NJ56_00775 IPR036890 NJ56_00775 NJ56_00780 IPR006101 Glycoside hydrolase, family 2 NJ56_00780 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich NJ56_00780 IPR006103 Glycoside hydrolase, family 2, TIM barrel NJ56_00780 IPR006104 Glycosyl hydrolases family 2, sugar binding domain NJ56_00780 IPR008979 Galactose-binding domain-like NJ56_00780 IPR013783 Immunoglobulin-like fold NJ56_00780 IPR017853 Glycoside hydrolase, superfamily NJ56_00780 IPR036156 NJ56_00780 NJ56_00785 IPR021478 Protein of unknown function DUF3131 NJ56_00790 IPR021478 Protein of unknown function DUF3131 NJ56_00795 IPR021478 Protein of unknown function DUF3131 NJ56_00800 IPR001173 Glycosyltransferase 2-like NJ56_00800 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_00805 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_00805 IPR036890 NJ56_00805 NJ56_00810 IPR001451 Bacterial transferase hexapeptide repeat NJ56_00810 IPR005835 Nucleotidyl transferase NJ56_00810 IPR011004 Trimeric LpxA-like NJ56_00810 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_00815 IPR002645 STAS domain NJ56_00815 IPR003658 Anti-sigma factor antagonist NJ56_00815 IPR036513 NJ56_00815 NJ56_00820 IPR001789 Signal transduction response regulator, receiver domain NJ56_00820 IPR001932 Protein phosphatase 2C (PP2C)-like domain NJ56_00820 IPR011006 CheY-like superfamily NJ56_00820 IPR036457 NJ56_00820 NJ56_00830 IPR000811 Glycosyl transferase, family 35 NJ56_00830 IPR011833 Glycogen/starch/alpha-glucan phosphorylase NJ56_00830 IPR035090 NJ56_00830 NJ56_00835 IPR014550 Uncharacterised conserved protein UCP028704, OpgC NJ56_00840 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase NJ56_00840 IPR016174 Di-haem cytochrome, transmembrane NJ56_00845 IPR008217 Domain of unknown function DUF125, transmembrane NJ56_00850 IPR011990 Tetratricopeptide-like helical domain NJ56_00855 IPR002347 Glucose/ribitol dehydrogenase NJ56_00855 IPR020904 Short-chain dehydrogenase/reductase, conserved site NJ56_00855 IPR036291 NJ56_00855 NJ56_00860 IPR016084 Haem oxygenase-like, multi-helical NJ56_00865 IPR000873 AMP-dependent synthetase/ligase NJ56_00865 IPR020845 AMP-binding, conserved site NJ56_00870 IPR016181 Acyl-CoA N-acyltransferase NJ56_00870 IPR022050 Thermostable hemolysin NJ56_00875 IPR006659 Arsenate reductase NJ56_00875 IPR006660 Arsenate reductase-like NJ56_00875 IPR036249 NJ56_00875 NJ56_00880 IPR000802 Arsenical pump membrane protein, ArsB NJ56_00885 IPR001845 HTH ArsR-type DNA-binding domain NJ56_00885 IPR036388 NJ56_00885 NJ56_00885 IPR036390 NJ56_00885 NJ56_00900 IPR000620 Drug/metabolite transporter NJ56_00905 IPR001173 Glycosyltransferase 2-like NJ56_00905 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_00910 IPR001584 Integrase, catalytic core NJ56_00920 IPR001584 Integrase, catalytic core NJ56_00920 IPR012337 Ribonuclease H-like domain NJ56_00920 IPR025948 HTH-like domain NJ56_00920 IPR036397 NJ56_00920 NJ56_00925 IPR002104 Integrase, catalytic NJ56_00925 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_00925 IPR013762 Integrase-like, catalytic core NJ56_00935 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase NJ56_00935 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NJ56_00935 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NJ56_00935 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site NJ56_00935 IPR036291 NJ56_00935 NJ56_00940 IPR036986 NJ56_00940 NJ56_00945 IPR007016 O-antigen ligase-related NJ56_00945 IPR021797 Protein of unknown function DUF3366 NJ56_00945 IPR031726 NJ56_00945 NJ56_00955 IPR000259 Fimbrial-type adhesion domain NJ56_00955 IPR008966 Adhesion domain NJ56_00955 IPR036937 NJ56_00955 NJ56_00960 IPR000259 Fimbrial-type adhesion domain NJ56_00960 IPR008966 Adhesion domain NJ56_00960 IPR036937 NJ56_00960 NJ56_00965 IPR000259 Fimbrial-type adhesion domain NJ56_00965 IPR008966 Adhesion domain NJ56_00965 IPR036937 NJ56_00965 NJ56_00970 IPR001829 Pili assembly chaperone, bacterial NJ56_00970 IPR008962 PapD-like NJ56_00970 IPR013783 Immunoglobulin-like fold NJ56_00970 IPR016147 PapD, N-terminal, bacterial NJ56_00970 IPR016148 Pili assembly chaperone, C-terminal domain NJ56_00970 IPR018046 Pili assembly chaperone, conserved site NJ56_00970 IPR036316 NJ56_00970 NJ56_00975 IPR000015 Outer membrane usher protein NJ56_00975 IPR018030 Fimbrial membrane usher, conserved site NJ56_00975 IPR025885 PapC, N-terminal domain NJ56_00975 IPR025949 PapC-like, C-terminal domain NJ56_00975 IPR037224 NJ56_00975 NJ56_00980 IPR000259 Fimbrial-type adhesion domain NJ56_00980 IPR008966 Adhesion domain NJ56_00980 IPR036937 NJ56_00980 NJ56_00985 IPR031854 NJ56_00985 NJ56_00990 IPR001867 Signal transduction response regulator, C-terminal NJ56_00990 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_00990 IPR036388 NJ56_00990 NJ56_00995 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding NJ56_00995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_00995 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR NJ56_00995 IPR015803 Cysteine-tRNA ligase NJ56_00995 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase NJ56_00995 IPR032678 NJ56_00995 NJ56_01000 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain NJ56_01000 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site NJ56_01000 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase NJ56_01000 IPR029000 Cyclophilin-like domain NJ56_01005 IPR010138 UDP-2,3-diacylglucosamine hydrolase NJ56_01005 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type NJ56_01005 IPR029052 Metallo-dependent phosphatase-like NJ56_01010 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain NJ56_01010 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE NJ56_01010 IPR033747 NJ56_01010 NJ56_01010 IPR035893 NJ56_01010 NJ56_01015 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type NJ56_01015 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit NJ56_01015 IPR011054 Rudiment single hybrid motif NJ56_01015 IPR013815 ATP-grasp fold, subdomain 1 NJ56_01015 IPR016185 Pre-ATP-grasp domain NJ56_01020 IPR003838 Permease FtsX-like NJ56_01025 IPR003439 ABC transporter-like NJ56_01025 IPR003593 AAA+ ATPase domain NJ56_01025 IPR017871 ABC transporter, conserved site NJ56_01025 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01030 IPR008265 Lipase, GDSL, active site NJ56_01030 IPR013830 NJ56_01030 NJ56_01030 IPR036514 NJ56_01030 NJ56_01035 IPR002347 Glucose/ribitol dehydrogenase NJ56_01035 IPR020904 Short-chain dehydrogenase/reductase, conserved site NJ56_01035 IPR036291 NJ56_01035 NJ56_01040 IPR011990 Tetratricopeptide-like helical domain NJ56_01040 IPR013766 Thioredoxin domain NJ56_01040 IPR036249 NJ56_01040 NJ56_01045 IPR001107 Band 7 protein NJ56_01045 IPR001972 Stomatin family NJ56_01045 IPR018080 Band 7/stomatin-like, conserved site NJ56_01045 IPR036013 NJ56_01045 NJ56_01050 IPR002810 NfeD-like, C-terminal domain NJ56_01055 IPR000551 MerR-type HTH domain NJ56_01055 IPR009061 DNA binding domain, putative NJ56_01055 IPR011789 Cu(I)-responsive transcriptional regulator NJ56_01060 IPR001757 Cation-transporting P-type ATPase NJ56_01060 IPR006121 Heavy metal-associated domain, HMA NJ56_01060 IPR008250 P-type ATPase, A domain NJ56_01060 IPR017969 Heavy-metal-associated, conserved site NJ56_01060 IPR018303 P-type ATPase, phosphorylation site NJ56_01060 IPR023214 HAD-like domain NJ56_01060 IPR023298 P-type ATPase, transmembrane domain NJ56_01060 IPR023299 P-type ATPase, cytoplasmic domain N NJ56_01060 IPR027256 Cation-transporting P-type ATPase, subfamily IB NJ56_01060 IPR036163 NJ56_01060 NJ56_01060 IPR036412 NJ56_01060 NJ56_01065 IPR002816 Pheromone shutdown, TraB NJ56_01070 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC NJ56_01070 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain NJ56_01070 IPR036754 NJ56_01070 NJ56_01075 IPR004843 Calcineurin-like phosphoesterase domain, apaH type NJ56_01075 IPR006146 5'-Nucleotidase, conserved site NJ56_01075 IPR006179 5'-Nucleotidase/apyrase NJ56_01075 IPR008334 5'-Nucleotidase, C-terminal NJ56_01075 IPR029052 Metallo-dependent phosphatase-like NJ56_01075 IPR036907 NJ56_01075 NJ56_01080 IPR003148 Regulator of K+ conductance, N-terminal NJ56_01080 IPR004771 K+/H+ exchanger NJ56_01080 IPR006153 Cation/H+ exchanger NJ56_01080 IPR036291 NJ56_01080 NJ56_01080 IPR038770 NJ56_01080 NJ56_01085 IPR011611 Carbohydrate kinase PfkB NJ56_01085 IPR029056 Ribokinase-like NJ56_01090 IPR003856 Lipopolysaccharide biosynthesis NJ56_01095 IPR011051 RmlC-like cupin domain NJ56_01095 IPR014710 RmlC-like jelly roll fold NJ56_01095 IPR027565 Cupin fold metalloprotein, WbuC family NJ56_01100 IPR001296 Glycosyl transferase, family 1 NJ56_01105 IPR003331 UDP-N-acetylglucosamine 2-epimerase NJ56_01105 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type NJ56_01110 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain NJ56_01110 IPR011051 RmlC-like cupin domain NJ56_01110 IPR014710 RmlC-like jelly roll fold NJ56_01110 IPR036291 NJ56_01110 NJ56_01115 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain NJ56_01115 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain NJ56_01115 IPR036291 NJ56_01115 NJ56_01120 IPR001296 Glycosyl transferase, family 1 NJ56_01130 IPR001173 Glycosyltransferase 2-like NJ56_01130 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_01140 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain NJ56_01140 IPR036291 NJ56_01140 NJ56_01145 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related NJ56_01145 IPR011051 RmlC-like cupin domain NJ56_01145 IPR014710 RmlC-like jelly roll fold NJ56_01150 IPR013445 CDP-glucose 4,6-dehydratase NJ56_01150 IPR016040 NAD(P)-binding domain NJ56_01150 IPR036291 NJ56_01150 NJ56_01155 IPR005835 Nucleotidyl transferase NJ56_01155 IPR013446 Glucose-1-phosphate cytidylyltransferase NJ56_01155 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_01165 IPR001015 Ferrochelatase NJ56_01165 IPR019772 Ferrochelatase, active site NJ56_01170 IPR000850 Adenylate kinase/UMP-CMP kinase NJ56_01170 IPR006259 Adenylate kinase subfamily NJ56_01170 IPR007862 Adenylate kinase, active site lid domain NJ56_01170 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01170 IPR033690 NJ56_01170 NJ56_01175 IPR001404 Heat shock protein Hsp90 family NJ56_01175 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_01175 IPR019805 Heat shock protein Hsp90, conserved site NJ56_01175 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_01175 IPR020575 Heat shock protein Hsp90, N-terminal NJ56_01175 IPR036890 NJ56_01175 NJ56_01175 IPR037196 NJ56_01175 NJ56_01180 IPR000093 DNA recombination protein RecR NJ56_01180 IPR006171 Toprim domain NJ56_01180 IPR015967 Recombination protein RecR, conserved site NJ56_01180 IPR023627 Recombination protein RecR NJ56_01180 IPR023628 Recombination protein RecR, C4-type zinc finger NJ56_01185 IPR004401 Nucleoid-associated protein YbaB NJ56_01185 IPR036894 NJ56_01185 NJ56_01190 IPR001270 ClpA/B family NJ56_01190 IPR003593 AAA+ ATPase domain NJ56_01190 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal NJ56_01190 IPR012763 DNA polymerase III, subunit gamma/ tau NJ56_01190 IPR021029 DNA polymerase III, tau subunit, domain V NJ56_01190 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV NJ56_01190 IPR022754 DNA polymerase III, gamma subunit, domain III NJ56_01190 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01190 IPR038249 NJ56_01190 NJ56_01195 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_01195 IPR003660 HAMP linker domain NJ56_01195 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_01195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_01195 IPR013727 Two-component sensor kinase N-terminal NJ56_01195 IPR036097 NJ56_01195 NJ56_01195 IPR036890 NJ56_01195 NJ56_01200 IPR001789 Signal transduction response regulator, receiver domain NJ56_01200 IPR001867 Signal transduction response regulator, C-terminal NJ56_01200 IPR011006 CheY-like superfamily NJ56_01200 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_01200 IPR036388 NJ56_01200 NJ56_01205 IPR005064 Bordetella uptake gene NJ56_01210 IPR009936 Protein of unknown function DUF1468 NJ56_01215 IPR002823 Protein of unknown function DUF112, transmembrane NJ56_01220 IPR000836 Phosphoribosyltransferase domain NJ56_01220 IPR005764 Adenine phosphoribosyl transferase NJ56_01220 IPR029057 Phosphoribosyltransferase-like NJ56_01225 IPR007401 Protein of unknown function DUF454 NJ56_01230 IPR010890 Primosomal replication PriB/PriC NJ56_01230 IPR038338 NJ56_01230 NJ56_01235 IPR019630 Protein of unknown function DUF2496, YbaM-related NJ56_01240 IPR006685 Mechanosensitive ion channel MscS NJ56_01240 IPR006686 Mechanosensitive ion channel MscS, conserved site NJ56_01240 IPR010920 Like-Sm (LSM) domain NJ56_01240 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 NJ56_01240 IPR011066 Mechanosensitive ion channel MscS, C-terminal NJ56_01240 IPR023408 NJ56_01240 NJ56_01240 IPR024393 Mechanosensitive ion channel MscS, porin domain NJ56_01240 IPR025692 Mechanosensitive ion channel inner membrane domain 1 NJ56_01245 IPR003787 Sulphur relay, DsrE/F-like protein NJ56_01245 IPR027396 DsrEFH-like NJ56_01250 IPR001647 DNA-binding HTH domain, TetR-type NJ56_01250 IPR009057 Homeodomain-like NJ56_01250 IPR013572 Transcription regulator MAATS, C-terminal NJ56_01250 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NJ56_01250 IPR036271 NJ56_01250 NJ56_01255 IPR006143 RND efflux pump, membrane fusion protein NJ56_01255 IPR032317 NJ56_01255 NJ56_01260 IPR001036 Acriflavin resistance protein NJ56_01260 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 NJ56_01260 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NJ56_01265 IPR002150 Ribosomal protein L31 NJ56_01265 IPR027493 Ribosomal protein L31 type B NJ56_01265 IPR034704 NJ56_01265 NJ56_01270 IPR000473 Ribosomal protein L36 NJ56_01270 IPR035977 NJ56_01270 NJ56_01280 IPR019693 Biofilm formation regulator YbaJ NJ56_01285 IPR007985 Haemolysin expression modulating, HHA NJ56_01285 IPR036666 NJ56_01285 NJ56_01295 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding NJ56_01295 IPR036217 NJ56_01295 NJ56_01295 IPR036388 NJ56_01295 NJ56_01300 IPR003703 Acyl-CoA thioesterase NJ56_01300 IPR029069 HotDog domain NJ56_01305 IPR001905 Ammonium transporter NJ56_01305 IPR002229 Blood group Rhesus C/E/D polypeptide NJ56_01305 IPR018047 Ammonium transporter, conserved site NJ56_01305 IPR024041 Ammonium transporter AmtB-like domain NJ56_01305 IPR029020 Ammonium/urea transporter NJ56_01310 IPR002187 Nitrogen regulatory protein PII NJ56_01310 IPR002332 Nitrogen regulatory protein P-II, urydylation site NJ56_01310 IPR011322 Nitrogen regulatory PII-like, alpha/beta NJ56_01310 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NJ56_01310 IPR017918 Nitrogen regulatory protein PII, conserved site NJ56_01315 IPR003439 ABC transporter-like NJ56_01315 IPR003593 AAA+ ATPase domain NJ56_01315 IPR011527 ABC transporter type 1, transmembrane domain NJ56_01315 IPR017871 ABC transporter, conserved site NJ56_01315 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01315 IPR036640 NJ56_01315 NJ56_01320 IPR003439 ABC transporter-like NJ56_01320 IPR003593 AAA+ ATPase domain NJ56_01320 IPR011527 ABC transporter type 1, transmembrane domain NJ56_01320 IPR017871 ABC transporter, conserved site NJ56_01320 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01320 IPR036640 NJ56_01320 NJ56_01325 IPR000485 AsnC-type HTH domain NJ56_01325 IPR011008 Dimeric alpha-beta barrel NJ56_01325 IPR019887 Transcription regulator AsnC-type, C-terminal NJ56_01325 IPR019888 Transcription regulator AsnC-type NJ56_01325 IPR036388 NJ56_01325 NJ56_01325 IPR036390 NJ56_01325 NJ56_01330 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NJ56_01330 IPR036052 NJ56_01330 NJ56_01335 IPR000150 Cof protein NJ56_01335 IPR006379 HAD-superfamily hydrolase, subfamily IIB NJ56_01335 IPR023214 HAD-like domain NJ56_01335 IPR023938 HMP-PP phosphatase NJ56_01335 IPR036412 NJ56_01335 NJ56_01340 IPR000914 Bacterial extracellular solute-binding protein, family 5 NJ56_01340 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain NJ56_01345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_01345 IPR018317 Queuosine biosynthesis protein QueC NJ56_01350 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family NJ56_01350 IPR029069 HotDog domain NJ56_01355 IPR004509 Competence protein ComEA, helix-hairpin-helix domain NJ56_01355 IPR010994 RuvA domain 2-like NJ56_01360 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type NJ56_01360 IPR027304 Trigger factor/SurA domain NJ56_01365 IPR000119 Histone-like bacterial DNA-binding protein NJ56_01365 IPR010992 Integration host factor (IHF)-like DNA-binding domain NJ56_01365 IPR020816 Histone-like DNA-binding protein, conserved site NJ56_01370 IPR003111 Peptidase S16, lon N-terminal NJ56_01370 IPR003593 AAA+ ATPase domain NJ56_01370 IPR003959 ATPase, AAA-type, core NJ56_01370 IPR004815 Lon protease, bacterial/eukaryotic-type NJ56_01370 IPR008268 Peptidase S16, active site NJ56_01370 IPR008269 Peptidase S16, Lon C-terminal NJ56_01370 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_01370 IPR015947 PUA-like domain NJ56_01370 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_01370 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01370 IPR027543 Lon protease, bacterial NJ56_01375 IPR003593 AAA+ ATPase domain NJ56_01375 IPR003959 ATPase, AAA-type, core NJ56_01375 IPR004487 Clp protease, ATP-binding subunit ClpX NJ56_01375 IPR010603 Zinc finger, ClpX C4-type NJ56_01375 IPR019489 Clp ATPase, C-terminal NJ56_01375 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01375 IPR038366 NJ56_01375 NJ56_01380 IPR001907 ATP-dependent Clp protease proteolytic subunit NJ56_01380 IPR018215 ClpP, active site NJ56_01380 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NJ56_01380 IPR029045 ClpP/crotonase-like domain NJ56_01380 IPR033135 NJ56_01380 NJ56_01385 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain NJ56_01385 IPR005215 Trigger factor NJ56_01385 IPR008880 Trigger factor, C-terminal domain NJ56_01385 IPR008881 Trigger factor, ribosome-binding, bacterial NJ56_01385 IPR027304 Trigger factor/SurA domain NJ56_01385 IPR036611 NJ56_01385 NJ56_01385 IPR037041 NJ56_01385 NJ56_01395 IPR002634 BolA protein NJ56_01395 IPR036065 NJ56_01395 NJ56_01400 IPR005619 Uncharacterised protein family, YajG NJ56_01405 IPR011701 Major facilitator superfamily NJ56_01405 IPR036259 NJ56_01405 NJ56_01410 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like NJ56_01410 IPR036777 NJ56_01410 NJ56_01415 IPR002429 Cytochrome c oxidase subunit II C-terminal NJ56_01415 IPR006333 Cytochrome o ubiquinol oxidase subunit II NJ56_01415 IPR008972 Cupredoxin NJ56_01415 IPR010514 COX aromatic rich motif NJ56_01415 IPR036257 NJ56_01415 NJ56_01420 IPR000883 Cytochrome c oxidase subunit I NJ56_01420 IPR014207 Cytochrome o ubiquinol oxidase, subunit I NJ56_01420 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site NJ56_01420 IPR036927 NJ56_01420 NJ56_01425 IPR000298 Cytochrome c oxidase subunit III domain NJ56_01425 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle NJ56_01425 IPR014206 Cytochrome o ubiquinol oxidase, subunit III NJ56_01425 IPR035973 NJ56_01425 NJ56_01430 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes NJ56_01430 IPR014210 Cytochrome o ubiquinol oxidase subunit IV NJ56_01435 IPR000537 UbiA prenyltransferase family NJ56_01435 IPR006369 Protohaem IX farnesyltransferase NJ56_01435 IPR030470 NJ56_01435 NJ56_01440 IPR011701 Major facilitator superfamily NJ56_01440 IPR036259 NJ56_01440 NJ56_01445 IPR007551 Protein of unknown function DUF520 NJ56_01445 IPR035570 NJ56_01445 NJ56_01445 IPR035571 NJ56_01445 NJ56_01445 IPR036183 NJ56_01445 NJ56_01450 IPR003710 Ketopantoate reductase ApbA/PanE NJ56_01450 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_01450 IPR013328 Dehydrogenase, multihelical NJ56_01450 IPR013332 Ketopantoate reductase, N-terminal domain NJ56_01450 IPR013752 Ketopantoate reductase, C-terminal domain NJ56_01450 IPR036291 NJ56_01450 NJ56_01455 IPR002818 ThiJ/PfpI NJ56_01455 IPR006287 DJ-1 NJ56_01455 IPR029062 Class I glutamine amidotransferase-like NJ56_01460 IPR000849 Sugar phosphate transporter NJ56_01460 IPR011701 Major facilitator superfamily NJ56_01460 IPR021159 Glycerate/sugar phosphate transporter, conserved site NJ56_01460 IPR036259 NJ56_01460 NJ56_01470 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_01470 IPR003660 HAMP linker domain NJ56_01470 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_01470 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_01470 IPR017116 Signal transduction histidine kinase, PgtB NJ56_01470 IPR036097 NJ56_01470 NJ56_01470 IPR036890 NJ56_01470 NJ56_01475 IPR001789 Signal transduction response regulator, receiver domain NJ56_01475 IPR002078 RNA polymerase sigma factor 54 interaction domain NJ56_01475 IPR002197 DNA binding HTH domain, Fis-type NJ56_01475 IPR009057 Homeodomain-like NJ56_01475 IPR011006 CheY-like superfamily NJ56_01475 IPR025944 Sigma-54 interaction domain, conserved site NJ56_01475 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01480 IPR003720 tRNA sulfurtransferase ThiI NJ56_01480 IPR004114 THUMP NJ56_01480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_01480 IPR020536 Thil, AANH domain NJ56_01480 IPR026340 Thiazole biosynthesis domain NJ56_01480 IPR036873 NJ56_01480 NJ56_01485 IPR003761 Exonuclease VII, small subunit NJ56_01485 IPR037004 NJ56_01485 NJ56_01490 IPR000092 Polyprenyl synthetase NJ56_01490 IPR008949 Terpenoid synthase NJ56_01490 IPR033749 NJ56_01490 NJ56_01495 IPR005474 Transketolase, N-terminal NJ56_01495 IPR005475 Transketolase-like, pyrimidine-binding domain NJ56_01495 IPR005477 Deoxyxylulose-5-phosphate synthase NJ56_01495 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II NJ56_01495 IPR020826 Transketolase binding site NJ56_01495 IPR029061 Thiamin diphosphate-binding fold NJ56_01495 IPR033248 NJ56_01495 NJ56_01500 IPR007686 YutG/PgpA domain NJ56_01500 IPR026037 Phosphatidylglycerophosphatase A NJ56_01500 IPR036681 NJ56_01500 NJ56_01505 IPR006283 Thiamine-monophosphate kinase NJ56_01505 IPR010918 AIR synthase-related protein, C-terminal domain NJ56_01505 IPR016188 PurM, N-terminal-like NJ56_01505 IPR036676 NJ56_01505 NJ56_01505 IPR036921 NJ56_01505 NJ56_01510 IPR006027 NusB/RsmB/TIM44 NJ56_01510 IPR011605 NusB antitermination factor NJ56_01510 IPR035926 NJ56_01510 NJ56_01515 IPR002180 6,7-dimethyl-8-ribityllumazine synthase NJ56_01515 IPR034964 NJ56_01515 NJ56_01515 IPR036467 NJ56_01515 NJ56_01520 IPR002125 CMP/dCMP deaminase, zinc-binding NJ56_01520 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal NJ56_01520 IPR004794 Riboflavin biosynthesis protein RibD NJ56_01520 IPR011549 Riboflavin-specific deaminase, C-terminal NJ56_01520 IPR016192 APOBEC/CMP deaminase, zinc-binding NJ56_01520 IPR016193 Cytidine deaminase-like NJ56_01520 IPR024072 Dihydrofolate reductase-like domain NJ56_01525 IPR003796 Ribonucleotide reductase regulator NrdR-like NJ56_01525 IPR005144 ATP-cone NJ56_01530 IPR005665 Protein-export membrane protein SecF, bacterial NJ56_01530 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NJ56_01530 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NJ56_01530 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NJ56_01535 IPR005791 Protein translocase subunit SecD NJ56_01535 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NJ56_01535 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NJ56_01535 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NJ56_01535 IPR027398 SecD export protein N-terminal TM domain NJ56_01540 IPR003849 Preprotein translocase YajC NJ56_01545 IPR002616 tRNA-guanine(15) transglycosylase-like NJ56_01545 IPR004803 Queuine tRNA-ribosyltransferase NJ56_01545 IPR036511 NJ56_01545 NJ56_01550 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA NJ56_01550 IPR036100 NJ56_01550 NJ56_01555 IPR007431 Acyl carrier protein phosphodiesterase NJ56_01555 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria NJ56_01560 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant NJ56_01560 IPR019479 Peroxiredoxin, C-terminal NJ56_01560 IPR024706 Peroxiredoxin, AhpC-type NJ56_01560 IPR036249 NJ56_01560 NJ56_01565 IPR002347 Glucose/ribitol dehydrogenase NJ56_01565 IPR036291 NJ56_01565 NJ56_01570 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain NJ56_01570 IPR006047 Glycosyl hydrolase, family 13, catalytic domain NJ56_01570 IPR013780 Glycosyl hydrolase, family 13, all-beta NJ56_01570 IPR017069 Maltodextrin glucosidase NJ56_01570 IPR017853 Glycoside hydrolase, superfamily NJ56_01575 IPR002293 Amino acid/polyamine transporter I NJ56_01575 IPR004840 Amino acid permease, conserved site NJ56_01575 IPR004841 Amino acid permease/ SLC12A domain NJ56_01580 IPR004685 Branched-chain amino acid transport system II carrier protein NJ56_01585 IPR011862 Phosphate binding protein NJ56_01585 IPR024370 PBP domain NJ56_01590 IPR000014 PAS domain NJ56_01590 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_01590 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_01590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_01590 IPR013767 PAS fold NJ56_01590 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR NJ56_01590 IPR021766 Protein of unknown function DUF3329 NJ56_01590 IPR035965 NJ56_01590 NJ56_01590 IPR036097 NJ56_01590 NJ56_01590 IPR036890 NJ56_01590 NJ56_01595 IPR001789 Signal transduction response regulator, receiver domain NJ56_01595 IPR001867 Signal transduction response regulator, C-terminal NJ56_01595 IPR011006 CheY-like superfamily NJ56_01595 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB NJ56_01595 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_01595 IPR036388 NJ56_01595 NJ56_01600 IPR004593 Nuclease SbcCD subunit D NJ56_01600 IPR004843 Calcineurin-like phosphoesterase domain, apaH type NJ56_01600 IPR026843 Nuclease SbcCD subunit D, C-terminal domain NJ56_01600 IPR029052 Metallo-dependent phosphatase-like NJ56_01605 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01610 IPR000600 ROK NJ56_01615 IPR007476 Putative exonuclease, RdgC NJ56_01620 IPR009664 Protein of unknown function DUF1255 NJ56_01620 IPR011051 RmlC-like cupin domain NJ56_01620 IPR014710 RmlC-like jelly roll fold NJ56_01625 IPR010843 Uncharacterised protein family AroM NJ56_01630 IPR009561 Protein of unknown function DUF1177 NJ56_01635 IPR004813 Oligopeptide transporter, OPT superfamily NJ56_01640 IPR005471 Transcription regulator IclR, N-terminal NJ56_01640 IPR014757 Transcription regulator IclR, C-terminal NJ56_01640 IPR029016 GAF domain-like NJ56_01640 IPR036388 NJ56_01640 NJ56_01640 IPR036390 NJ56_01640 NJ56_01645 IPR000623 Shikimate kinase/Threonine synthase-like 1 NJ56_01645 IPR023000 Shikimate kinase, conserved site NJ56_01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01645 IPR027544 Shikimate kinase 2 NJ56_01645 IPR031322 NJ56_01645 NJ56_01650 IPR000531 TonB-dependent receptor, beta-barrel NJ56_01650 IPR010105 TonB-dependent siderophore receptor NJ56_01650 IPR012910 TonB-dependent receptor, plug NJ56_01650 IPR036942 NJ56_01650 NJ56_01650 IPR037066 NJ56_01650 NJ56_01655 IPR002491 ABC transporter periplasmic binding domain NJ56_01660 IPR010854 Domain of unknown function DUF1471 NJ56_01660 IPR025543 Dodecin-like NJ56_01660 IPR036275 NJ56_01660 NJ56_01665 IPR000182 GNAT domain NJ56_01665 IPR016181 Acyl-CoA N-acyltransferase NJ56_01670 IPR036640 NJ56_01670 NJ56_01675 IPR009875 PilZ domain NJ56_01675 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal NJ56_01675 IPR012349 FMN-binding split barrel NJ56_01675 IPR023787 Type III secretion system flagellar brake protein YcgR NJ56_01680 IPR000965 Gamma-glutamyl phosphate reductase GPR NJ56_01680 IPR012134 Glutamate-5-semialdehyde dehydrogenase NJ56_01680 IPR015590 Aldehyde dehydrogenase domain NJ56_01680 IPR016161 Aldehyde/histidinol dehydrogenase NJ56_01680 IPR016162 Aldehyde dehydrogenase, N-terminal NJ56_01680 IPR016163 Aldehyde dehydrogenase, C-terminal NJ56_01680 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site NJ56_01685 IPR001048 Aspartate/glutamate/uridylate kinase NJ56_01685 IPR001057 Glutamate/acetylglutamate kinase NJ56_01685 IPR002478 PUA domain NJ56_01685 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase NJ56_01685 IPR011529 Glutamate 5-kinase NJ56_01685 IPR015947 PUA-like domain NJ56_01685 IPR019797 Glutamate 5-kinase, conserved site NJ56_01685 IPR036393 NJ56_01685 NJ56_01685 IPR036974 NJ56_01685 NJ56_01690 IPR009986 Sigma factor-binding protein Crl NJ56_01690 IPR038208 NJ56_01690 NJ56_01695 IPR010520 Protein of unknown function DUF1100, hydrolase-like NJ56_01695 IPR029058 Alpha/Beta hydrolase fold NJ56_01700 IPR000836 Phosphoribosyltransferase domain NJ56_01700 IPR023747 Xanthine-guanine phosphoribosyltransferase NJ56_01700 IPR029057 Phosphoribosyltransferase-like NJ56_01705 IPR001160 Peptidase M20C, Xaa-His dipeptidase NJ56_01705 IPR002933 Peptidase M20 NJ56_01705 IPR011650 Peptidase M20, dimerisation domain NJ56_01710 IPR001126 DNA-repair protein, UmuC-like NJ56_01710 IPR017961 DNA polymerase, Y-family, little finger domain NJ56_01710 IPR022880 DNA polymerase IV NJ56_01710 IPR024728 DNA polymerase type-Y, HhH motif NJ56_01710 IPR036775 NJ56_01710 NJ56_01715 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain NJ56_01715 IPR030395 NJ56_01715 NJ56_01720 IPR007495 Protein of unknown function DUF539 NJ56_01725 IPR003374 ApbE-like domain NJ56_01725 IPR024932 Flavin transferase ApbE NJ56_01730 IPR001041 2Fe-2S ferredoxin-type domain NJ56_01730 IPR001433 Oxidoreductase FAD/NAD(P)-binding NJ56_01730 IPR008333 Oxidoreductase, FAD-binding domain NJ56_01730 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit NJ56_01730 IPR012675 Beta-grasp domain NJ56_01730 IPR017938 Riboflavin synthase-like beta-barrel NJ56_01730 IPR036010 NJ56_01730 NJ56_01730 IPR039261 NJ56_01730 NJ56_01735 IPR003667 Electron transport complex, Rnf/Nqr NJ56_01735 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit NJ56_01740 IPR003667 Electron transport complex, Rnf/Nqr NJ56_01740 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit NJ56_01745 IPR007329 FMN-binding NJ56_01745 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit NJ56_01750 IPR004338 NADH-quinone reductase NQR2/RnfD NJ56_01750 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit NJ56_01755 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A NJ56_01755 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal NJ56_01760 IPR005490 L,D-transpeptidase catalytic domain NJ56_01760 IPR038063 NJ56_01760 NJ56_01765 IPR026869 Putative glutamine amidotransferase type 2 NJ56_01765 IPR029055 Nucleophile aminohydrolases, N-terminal NJ56_01770 IPR001347 Sugar isomerase (SIS) NJ56_01770 IPR004515 Phosphoheptose isomerase NJ56_01775 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NJ56_01775 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NJ56_01775 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain NJ56_01775 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NJ56_01775 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type NJ56_01775 IPR036250 NJ56_01775 NJ56_01775 IPR037069 NJ56_01775 NJ56_01785 IPR006054 DNA polymerase III, epsilon subunit NJ56_01785 IPR006309 DNA polymerase 3, epsilon subunit NJ56_01785 IPR012337 Ribonuclease H-like domain NJ56_01785 IPR013520 Exonuclease, RNase T/DNA polymerase III NJ56_01785 IPR036397 NJ56_01785 NJ56_01790 IPR002156 Ribonuclease H domain NJ56_01790 IPR012337 Ribonuclease H-like domain NJ56_01790 IPR022892 Ribonuclease H NJ56_01790 IPR036397 NJ56_01790 NJ56_01795 IPR013216 Methyltransferase type 11 NJ56_01795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_01800 IPR001279 Beta-lactamase-like NJ56_01800 IPR017782 Hydroxyacylglutathione hydrolase NJ56_01800 IPR032282 NJ56_01800 NJ56_01800 IPR036866 NJ56_01800 NJ56_01805 IPR000189 Prokaryotic transglycosylase, active site NJ56_01805 IPR008258 Lytic transglycosylase-like SLT domain NJ56_01805 IPR018392 LysM domain NJ56_01805 IPR023346 Lysozyme-like domain NJ56_01805 IPR036779 NJ56_01805 NJ56_01810 IPR005135 Endonuclease/exonuclease/phosphatase NJ56_01810 IPR036691 NJ56_01810 NJ56_01845 IPR001270 ClpA/B family NJ56_01845 IPR003593 AAA+ ATPase domain NJ56_01845 IPR003959 ATPase, AAA-type, core NJ56_01845 IPR004176 Clp, N-terminal NJ56_01845 IPR017730 Chaperonin ClpB NJ56_01845 IPR018368 ClpA/B, conserved site 1 NJ56_01845 IPR019489 Clp ATPase, C-terminal NJ56_01845 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01845 IPR028299 ClpA/B, conserved site 2 NJ56_01845 IPR036628 NJ56_01845 NJ56_01850 IPR003730 Multi-copper polyphenol oxidoreductase, laccase NJ56_01850 IPR011324 Cytotoxic necrotizing factor-like, catalytic NJ56_01850 IPR038371 NJ56_01850 NJ56_01855 IPR002942 RNA-binding S4 domain NJ56_01855 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F NJ56_01855 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NJ56_01855 IPR006225 Pseudouridine synthase, RluC/RluD NJ56_01855 IPR020103 Pseudouridine synthase, catalytic domain NJ56_01855 IPR036986 NJ56_01855 NJ56_01865 IPR011990 Tetratricopeptide-like helical domain NJ56_01865 IPR017689 Outer membrane protein assembly factor BamD NJ56_01865 IPR039565 NJ56_01865 NJ56_01870 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein NJ56_01870 IPR036567 NJ56_01870 NJ56_01875 IPR001086 Prephenate dehydratase NJ56_01875 IPR002701 Chorismate mutase NJ56_01875 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase NJ56_01875 IPR010952 Chorismate mutase, gammaproteobacteria NJ56_01875 IPR018528 Prephenate dehydratase, conserved site NJ56_01875 IPR036263 NJ56_01875 NJ56_01875 IPR036979 NJ56_01875 NJ56_01880 IPR002701 Chorismate mutase NJ56_01880 IPR003099 Prephenate dehydrogenase NJ56_01880 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein NJ56_01880 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_01880 IPR011277 Chorismate mutase, T-protein NJ56_01880 IPR036263 NJ56_01880 NJ56_01880 IPR036291 NJ56_01880 NJ56_01880 IPR036979 NJ56_01880 NJ56_01885 IPR006218 DAHP synthetase I/KDSA NJ56_01885 IPR006219 DHAP synthase, class 1 NJ56_01885 IPR013785 Aldolase-type TIM barrel NJ56_01890 IPR001789 Signal transduction response regulator, receiver domain NJ56_01890 IPR007492 LytTR DNA-binding domain NJ56_01890 IPR011006 CheY-like superfamily NJ56_01895 IPR004668 Anaerobic c4-dicarboxylate membrane transporter NJ56_01900 IPR007433 Protein of unknown function DUF481 NJ56_01905 IPR001857 Ribosomal protein L19 NJ56_01905 IPR008991 Translation protein SH3-like domain NJ56_01905 IPR018257 Ribosomal protein L19, conserved site NJ56_01905 IPR038657 NJ56_01905 NJ56_01910 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria NJ56_01910 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain NJ56_01910 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal NJ56_01910 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NJ56_01910 IPR029028 Alpha/beta knot methyltransferases NJ56_01915 IPR002676 RimM protein NJ56_01915 IPR009000 Translation protein, beta-barrel domain NJ56_01915 IPR011033 PRC-barrel-like NJ56_01915 IPR011961 16S rRNA processing protein RimM NJ56_01915 IPR027275 PRC-barrel domain NJ56_01915 IPR036976 NJ56_01915 NJ56_01920 IPR000307 Ribosomal protein S16 NJ56_01920 IPR020592 Ribosomal protein S16, conserved site NJ56_01920 IPR023803 Ribosomal protein S16 domain NJ56_01925 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain NJ56_01925 IPR003593 AAA+ ATPase domain NJ56_01925 IPR004125 Signal recognition particle, SRP54 subunit, M-domain NJ56_01925 IPR004780 Signal recognition particle protein Ffh NJ56_01925 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle NJ56_01925 IPR022941 Signal recognition particle, SRP54 subunit NJ56_01925 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_01925 IPR036891 NJ56_01925 NJ56_01930 IPR002541 Cytochrome c assembly protein NJ56_01935 IPR002550 Domain of unknown function DUF21 NJ56_01935 IPR005170 Transporter-associated domain NJ56_01935 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 NJ56_01935 IPR036318 NJ56_01935 NJ56_01940 IPR003815 S-ribosylhomocysteinase (LuxS) NJ56_01940 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like NJ56_01940 IPR037005 NJ56_01940 NJ56_01945 IPR006334 Glutamate--cysteine ligase, monofunctional NJ56_01945 IPR007370 Glutamate--cysteine ligase NJ56_01945 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain NJ56_01950 IPR020143 Uncharacterised protein family, RP436 NJ56_01950 IPR032816 NJ56_01950 NJ56_01955 IPR006439 HAD hydrolase, subfamily IA NJ56_01955 IPR010976 Beta-phosphoglucomutase hydrolase NJ56_01955 IPR023198 Phosphoglycolate phosphatase, domain 2 NJ56_01955 IPR023214 HAD-like domain NJ56_01955 IPR036412 NJ56_01955 NJ56_01980 IPR003751 Carbon storage regulator NJ56_01980 IPR036107 NJ56_01980 NJ56_01985 IPR002318 Alanine-tRNA ligase, class IIc NJ56_01985 IPR003156 DHHA1 domain NJ56_01985 IPR009000 Translation protein, beta-barrel domain NJ56_01985 IPR012947 Threonyl/alanyl tRNA synthetase, SAD NJ56_01985 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain NJ56_01985 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain NJ56_01985 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal NJ56_01985 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria NJ56_01990 IPR003783 Regulatory protein RecX NJ56_01990 IPR036388 NJ56_01990 NJ56_01995 IPR003593 AAA+ ATPase domain NJ56_01995 IPR013765 DNA recombination and repair protein RecA NJ56_01995 IPR020584 DNA recombination/repair protein RecA, conserved site NJ56_01995 IPR023400 DNA recombination and repair protein RecA, C-terminal NJ56_01995 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02000 IPR008136 CinA, C-terminal NJ56_02000 IPR036653 NJ56_02000 NJ56_02005 IPR011701 Major facilitator superfamily NJ56_02005 IPR036259 NJ56_02005 NJ56_02010 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain NJ56_02010 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain NJ56_02010 IPR011167 Iron-dependent fumarate hydratase NJ56_02010 IPR020557 Fumarate lyase, conserved site NJ56_02010 IPR036660 NJ56_02010 NJ56_02015 IPR018535 Domain of unknown function DUF1996 NJ56_02025 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase NJ56_02025 IPR016174 Di-haem cytochrome, transmembrane NJ56_02030 IPR001867 Signal transduction response regulator, C-terminal NJ56_02030 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_02030 IPR036388 NJ56_02030 NJ56_02035 IPR024961 NJ56_02035 NJ56_02040 IPR001775 GspD/PilQ family NJ56_02040 IPR004846 Type II/III secretion system NJ56_02040 IPR005644 NolW-like NJ56_02040 IPR013356 Type II secretion system GspD NJ56_02040 IPR038591 NJ56_02040 NJ56_02045 IPR001482 Type II secretion system protein E NJ56_02045 IPR003593 AAA+ ATPase domain NJ56_02045 IPR013369 Type II secretion system GspE NJ56_02045 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02045 IPR037257 NJ56_02045 NJ56_02050 IPR001992 Type II secretion system conserved site NJ56_02050 IPR003004 GspF/PilC family NJ56_02050 IPR011850 General secretion pathway protein F NJ56_02050 IPR018076 Type II secretion system F domain NJ56_02055 IPR000983 Bacterial general secretion pathway protein G-type pilin NJ56_02055 IPR010054 General secretion pathway protein G NJ56_02055 IPR012902 Prokaryotic N-terminal methylation site NJ56_02055 IPR013545 Type II secretion system protein G NJ56_02060 IPR002416 Type II secretion system protein H NJ56_02060 IPR012902 Prokaryotic N-terminal methylation site NJ56_02060 IPR022346 General secretion pathway, GspH NJ56_02065 IPR003413 Type II secretion system protein I domain NJ56_02065 IPR010052 Type II secretion system protein I NJ56_02065 IPR012902 Prokaryotic N-terminal methylation site NJ56_02070 IPR010055 Type II secretion system protein J NJ56_02070 IPR012902 Prokaryotic N-terminal methylation site NJ56_02075 IPR005628 General secretion pathway protein K NJ56_02075 IPR038072 NJ56_02075 NJ56_02080 IPR007812 Type II secretion system protein L NJ56_02080 IPR024230 GspL, cytoplasmic actin-ATPase-like domain NJ56_02080 IPR025691 GspL periplasmic domain NJ56_02085 IPR007690 Type II secretion system, protein M NJ56_02085 IPR023229 Type II secretion system protein M, periplasmic domain NJ56_02090 IPR000045 Prepilin type IV endopeptidase, peptidase domain NJ56_02090 IPR010627 Peptidase A24A, N-terminal NJ56_02090 IPR014032 Peptidase A24A, prepilin type IV, bacterial NJ56_02095 IPR019114 Chaperone lipoprotein, PulS/OutS-like NJ56_02095 IPR038432 NJ56_02095 NJ56_02100 IPR003610 Carbohydrate-binding module family 5/12 NJ56_02100 IPR004302 Chitin-binding, domain 3 NJ56_02100 IPR014756 Immunoglobulin E-set NJ56_02100 IPR036573 NJ56_02100 NJ56_02105 IPR005625 PepSY-associated TM helix NJ56_02110 IPR000242 Protein-tyrosine phosphatase, receptor/non-receptor type NJ56_02110 IPR003595 Protein-tyrosine phosphatase, catalytic NJ56_02110 IPR016130 Protein-tyrosine phosphatase, active site NJ56_02110 IPR029021 Protein-tyrosine phosphatase-like NJ56_02115 IPR010261 Tir chaperone protein (CesT) family NJ56_02120 IPR009081 Acyl carrier protein-like NJ56_02120 IPR036736 NJ56_02120 NJ56_02130 IPR009483 Invasion plasmid antigen IpaD NJ56_02130 IPR036708 NJ56_02130 NJ56_02140 IPR006972 Secretion system effector C, SseC-like NJ56_02145 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD NJ56_02145 IPR011716 Tetratricopeptide TPR-3 NJ56_02145 IPR011990 Tetratricopeptide-like helical domain NJ56_02145 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup NJ56_02150 IPR006135 Type III secretion system substrate exporter NJ56_02150 IPR006307 Type III exporter system, secretion apparatus protein BsaZ NJ56_02150 IPR029025 Type III secretion system substrate exporter, C-terminal NJ56_02155 IPR002010 Type III secretion system inner membrane R protein NJ56_02155 IPR006304 Type III secretion protein SpaR/YscT NJ56_02160 IPR002191 Bacterial export protein family 3 NJ56_02160 IPR006306 Type III secretion protein HrpO NJ56_02165 IPR005773 Yop virulence translocation protein R NJ56_02165 IPR005838 Type III secretion system inner membrane P protein NJ56_02170 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb NJ56_02170 IPR001543 Surface presentation of antigen (SpoA) NJ56_02170 IPR036429 NJ56_02170 NJ56_02185 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NJ56_02185 IPR003593 AAA+ ATPase domain NJ56_02185 IPR005714 ATPase, type III secretion system, FliI/YscN NJ56_02185 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02190 IPR003065 Surface presentation of antigens protein SpaK NJ56_02195 IPR001712 Type III secretion system FHIPEP NJ56_02195 IPR006302 Type III secretion protein HrcV NJ56_02195 IPR025505 FHIPEP conserved site NJ56_02200 IPR010812 Hypersensitivity response secretion-like, HrpJ NJ56_02200 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC NJ56_02205 IPR003522 Type III secretion system outer membrane pore YscC/HrcC NJ56_02205 IPR004846 Type II/III secretion system NJ56_02205 IPR005644 NolW-like NJ56_02205 IPR038591 NJ56_02205 NJ56_02210 IPR009057 Homeodomain-like NJ56_02210 IPR018060 DNA binding HTH domain, AraC-type NJ56_02210 IPR020449 Transcription regulator HTH, AraC- type NJ56_02215 IPR019029 Type III secretion system, PrgH/EprH-like NJ56_02220 IPR021123 Type III secretion, needle-protein-like NJ56_02220 IPR037203 NJ56_02220 NJ56_02225 IPR037203 NJ56_02225 NJ56_02230 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ NJ56_02230 IPR006182 Secretory protein YscJ/FliF NJ56_02235 IPR013388 Type III secretion apparatus protein OrgA/MxiK NJ56_02250 IPR008258 Lytic transglycosylase-like SLT domain NJ56_02250 IPR023346 Lysozyme-like domain NJ56_02255 IPR001867 Signal transduction response regulator, C-terminal NJ56_02255 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_02255 IPR036388 NJ56_02255 NJ56_02265 IPR000792 Transcription regulator LuxR, C-terminal NJ56_02265 IPR001789 Signal transduction response regulator, receiver domain NJ56_02265 IPR011006 CheY-like superfamily NJ56_02265 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_02265 IPR036388 NJ56_02265 NJ56_02270 IPR001638 Extracellular solute-binding protein, family 3 NJ56_02270 IPR001789 Signal transduction response regulator, receiver domain NJ56_02270 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_02270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_02270 IPR011006 CheY-like superfamily NJ56_02270 IPR036097 NJ56_02270 NJ56_02270 IPR036890 NJ56_02270 NJ56_02275 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NJ56_02275 IPR036641 NJ56_02275 NJ56_02280 IPR000432 DNA mismatch repair protein MutS, C-terminal NJ56_02280 IPR005748 DNA mismatch repair protein MutS, type 1 NJ56_02280 IPR007695 DNA mismatch repair protein MutS-like, N-terminal NJ56_02280 IPR007696 DNA mismatch repair protein MutS, core NJ56_02280 IPR007860 DNA mismatch repair protein MutS, connector domain NJ56_02280 IPR007861 DNA mismatch repair protein MutS, clamp NJ56_02280 IPR016151 DNA mismatch repair protein MutS, N-terminal NJ56_02280 IPR017261 DNA mismatch repair protein Msh6 NJ56_02280 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02280 IPR036187 NJ56_02280 NJ56_02280 IPR036678 NJ56_02280 NJ56_02285 IPR000943 RNA polymerase sigma-70 NJ56_02285 IPR007624 RNA polymerase sigma-70 region 3 NJ56_02285 IPR007627 RNA polymerase sigma-70 region 2 NJ56_02285 IPR007630 RNA polymerase sigma-70 region 4 NJ56_02285 IPR009042 RNA polymerase sigma-70 region 1.2 NJ56_02285 IPR012761 RNA polymerase sigma factor RpoS NJ56_02285 IPR013324 RNA polymerase sigma factor, region 3/4 NJ56_02285 IPR013325 RNA polymerase sigma factor, region 2 NJ56_02285 IPR014284 RNA polymerase sigma-70 like domain NJ56_02285 IPR036388 NJ56_02285 NJ56_02290 IPR011055 Duplicated hybrid motif NJ56_02290 IPR016047 Peptidase M23 NJ56_02290 IPR018392 LysM domain NJ56_02290 IPR036779 NJ56_02290 NJ56_02295 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase NJ56_02295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_02300 IPR002828 Survival protein SurE-like phosphatase/nucleotidase NJ56_02300 IPR030048 NJ56_02300 NJ56_02300 IPR036523 NJ56_02300 NJ56_02305 IPR001656 Pseudouridine synthase, TruD NJ56_02305 IPR020103 Pseudouridine synthase, catalytic domain NJ56_02305 IPR020119 Pseudouridine synthase TruD, conserved site NJ56_02310 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NJ56_02310 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site NJ56_02310 IPR036571 NJ56_02310 NJ56_02315 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NJ56_02315 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site NJ56_02315 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_02315 IPR034683 NJ56_02315 NJ56_02320 IPR007060 Septum formation initiator FtsL/DivIC NJ56_02320 IPR023081 Cell division protein FtsB NJ56_02325 IPR022721 Protein of unknown function DUF3561 NJ56_02330 IPR002891 Adenylylsulphate kinase NJ56_02330 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02335 IPR000795 Elongation factor, GTP-binding domain NJ56_02335 IPR005225 Small GTP-binding protein domain NJ56_02335 IPR009000 Translation protein, beta-barrel domain NJ56_02335 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NJ56_02335 IPR011779 Sulphate adenylyltransferase, large subunit NJ56_02335 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02335 IPR031157 NJ56_02335 NJ56_02340 IPR002500 Phosphoadenosine phosphosulphate reductase NJ56_02340 IPR011784 Sulphate adenylyltransferase, small subunit NJ56_02340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_02345 IPR000878 Tetrapyrrole methylase NJ56_02345 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site NJ56_02345 IPR006366 Uroporphyrin-III C-methyltransferase NJ56_02345 IPR006367 Sirohaem synthase, N-terminal NJ56_02345 IPR012409 Sirohaem synthase NJ56_02345 IPR014776 Tetrapyrrole methylase, subdomain 2 NJ56_02345 IPR014777 Tetrapyrrole methylase, subdomain 1 NJ56_02345 IPR019478 Sirohaem synthase, dimerisation domain NJ56_02345 IPR028281 Siroheme synthase, central domain NJ56_02345 IPR035996 NJ56_02345 NJ56_02345 IPR036291 NJ56_02345 NJ56_02345 IPR037115 NJ56_02345 NJ56_02350 IPR007484 Peptidase M28 NJ56_02360 IPR031807 NJ56_02360 NJ56_02360 IPR035069 NJ56_02360 NJ56_02365 IPR002500 Phosphoadenosine phosphosulphate reductase NJ56_02365 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase NJ56_02365 IPR011800 Phosphoadenosine phosphosulphate reductase CysH NJ56_02365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_02370 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain NJ56_02370 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site NJ56_02370 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain NJ56_02370 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit NJ56_02370 IPR036136 NJ56_02370 NJ56_02375 IPR001094 Flavodoxin NJ56_02375 IPR001433 Oxidoreductase FAD/NAD(P)-binding NJ56_02375 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NJ56_02375 IPR003097 FAD-binding, type 1 NJ56_02375 IPR008254 Flavodoxin/nitric oxide synthase NJ56_02375 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain NJ56_02375 IPR017938 Riboflavin synthase-like beta-barrel NJ56_02375 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 NJ56_02375 IPR029039 Flavoprotein-like NJ56_02375 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria NJ56_02375 IPR039261 NJ56_02375 NJ56_02380 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NJ56_02380 IPR038418 NJ56_02380 NJ56_02385 IPR007197 Radical SAM NJ56_02385 IPR013785 Aldolase-type TIM barrel NJ56_02385 IPR024924 7-carboxy-7-deazaguanine synthase-like NJ56_02385 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria NJ56_02390 IPR000941 Enolase NJ56_02390 IPR020809 Enolase, conserved site NJ56_02390 IPR020810 Enolase, C-terminal NJ56_02390 IPR020811 Enolase, N-terminal NJ56_02390 IPR029017 Enolase N-terminal domain-like NJ56_02390 IPR036849 NJ56_02390 NJ56_02395 IPR004468 CTP synthase NJ56_02395 IPR017456 CTP synthase, N-terminal NJ56_02395 IPR017926 Glutamine amidotransferase NJ56_02395 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02395 IPR029062 Class I glutamine amidotransferase-like NJ56_02400 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core NJ56_02400 IPR011551 NTP pyrophosphohydrolase MazG, bacterial NJ56_02405 IPR002912 ACT domain NJ56_02405 IPR003607 HD/PDEase domain NJ56_02405 IPR004095 TGS NJ56_02405 IPR004811 RelA/SpoT family NJ56_02405 IPR007685 RelA/SpoT NJ56_02405 IPR012675 Beta-grasp domain NJ56_02405 IPR012676 TGS-like NJ56_02410 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD NJ56_02410 IPR002792 TRAM domain NJ56_02410 IPR010280 (Uracil-5)-methyltransferase family NJ56_02410 IPR012340 Nucleic acid-binding, OB-fold NJ56_02410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_02410 IPR030390 NJ56_02410 NJ56_02410 IPR030391 NJ56_02410 NJ56_02415 IPR001789 Signal transduction response regulator, receiver domain NJ56_02415 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_02415 IPR003660 HAMP linker domain NJ56_02415 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_02415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_02415 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NJ56_02415 IPR011006 CheY-like superfamily NJ56_02415 IPR019247 Histidine kinase BarA, N-terminal NJ56_02415 IPR036097 NJ56_02415 NJ56_02415 IPR036641 NJ56_02415 NJ56_02415 IPR036890 NJ56_02415 NJ56_02420 IPR001478 PDZ domain NJ56_02420 IPR001940 Peptidase S1C NJ56_02420 IPR009003 Trypsin-like cysteine/serine peptidase domain NJ56_02420 IPR011782 Peptidase S1C, Do NJ56_02420 IPR036034 NJ56_02420 NJ56_02425 IPR003607 HD/PDEase domain NJ56_02425 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase NJ56_02425 IPR006674 HD domain NJ56_02425 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria NJ56_02425 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain NJ56_02425 IPR026875 Phosphohydrolase-associated domain NJ56_02430 IPR000845 Nucleoside phosphorylase domain NJ56_02430 IPR010049 MTA/SAH nucleosidase NJ56_02430 IPR035994 NJ56_02430 NJ56_02435 IPR002491 ABC transporter periplasmic binding domain NJ56_02435 IPR023544 ABC transporter, vitamin B12-binding protein NJ56_02440 IPR005115 Uncharacterised domain UPF0126 NJ56_02445 IPR000361 FeS cluster biogenesis NJ56_02445 IPR016092 FeS cluster insertion protein NJ56_02445 IPR017870 FeS cluster insertion, C-terminal, conserved site NJ56_02445 IPR023063 Iron-sulfur cluster insertion protein ErpA NJ56_02445 IPR035903 NJ56_02445 NJ56_02450 IPR001807 Chloride channel, voltage gated NJ56_02450 IPR014743 Chloride channel, core NJ56_02455 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase NJ56_02455 IPR005814 Aminotransferase class-III NJ56_02455 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_02455 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_02455 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_02460 IPR001264 Glycosyl transferase, family 51 NJ56_02460 IPR001460 Penicillin-binding protein, transpeptidase NJ56_02460 IPR011813 Penicillin-binding protein 1B NJ56_02460 IPR012338 Beta-lactamase/transpeptidase-like NJ56_02460 IPR023346 Lysozyme-like domain NJ56_02460 IPR028166 Bifunctional transglycosylase second domain NJ56_02460 IPR032730 NJ56_02460 NJ56_02460 IPR036950 NJ56_02460 NJ56_02465 IPR001650 Helicase, C-terminal NJ56_02465 IPR007502 Helicase-associated domain NJ56_02465 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type NJ56_02465 IPR011545 DEAD/DEAH box helicase domain NJ56_02465 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal NJ56_02465 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_02465 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02470 IPR004175 2',5' RNA ligase NJ56_02470 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NJ56_02475 IPR005224 Sugar fermentation stimulation protein NJ56_02485 IPR000962 Zinc finger, DksA/TraR C4-type NJ56_02485 IPR012784 RNA polymerase-binding transcription factor DksA NJ56_02485 IPR020458 Zinc finger, DksA/TraR C4-type conserved site NJ56_02485 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria NJ56_02485 IPR037187 NJ56_02485 NJ56_02490 IPR000924 Glutamyl/glutaminyl-tRNA synthetase NJ56_02490 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_02490 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain NJ56_02490 IPR022380 Glutamyl-Q tRNA(Asp) synthetase NJ56_02495 IPR002646 Poly A polymerase, head domain NJ56_02495 IPR010206 Poly(A) polymerase I NJ56_02495 IPR025866 Polymerase A arginine-rich C-terminal domain NJ56_02495 IPR032828 NJ56_02495 NJ56_02500 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK NJ56_02500 IPR035907 NJ56_02500 NJ56_02505 IPR003700 Ketopantoate hydroxymethyltransferase NJ56_02505 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain NJ56_02510 IPR003721 Pantoate-beta-alanine ligase NJ56_02510 IPR004821 Cytidyltransferase-like domain NJ56_02510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_02515 IPR003190 Aspartate decarboxylase NJ56_02515 IPR009010 Aspartate decarboxylase-like domain NJ56_02520 IPR002509 Polysaccharide deacetylase NJ56_02520 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NJ56_02525 IPR000412 ABC-2 transporter NJ56_02525 IPR013525 ABC-2 type transporter NJ56_02530 IPR003439 ABC transporter-like NJ56_02530 IPR003593 AAA+ ATPase domain NJ56_02530 IPR017871 ABC transporter, conserved site NJ56_02530 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02535 IPR001765 Carbonic anhydrase NJ56_02535 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site NJ56_02535 IPR036874 NJ56_02535 NJ56_02540 IPR000836 Phosphoribosyltransferase domain NJ56_02540 IPR005904 Hypoxanthine phosphoribosyl transferase NJ56_02540 IPR029057 Phosphoribosyltransferase-like NJ56_02545 IPR001117 Multicopper oxidase, type 1 NJ56_02545 IPR002355 Multicopper oxidase, copper-binding site NJ56_02545 IPR008972 Cupredoxin NJ56_02545 IPR011706 Multicopper oxidase, type 2 NJ56_02545 IPR011707 Multicopper oxidase, type 3 NJ56_02550 IPR019114 Chaperone lipoprotein, PulS/OutS-like NJ56_02550 IPR038432 NJ56_02550 NJ56_02555 IPR001045 Spermidine/spermine synthases family NJ56_02555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_02555 IPR030373 NJ56_02555 NJ56_02555 IPR035246 NJ56_02555 NJ56_02555 IPR037163 NJ56_02555 NJ56_02560 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic NJ56_02560 IPR009165 S-adenosylmethionine decarboxylase, bacterial NJ56_02560 IPR016067 S-adenosylmethionine decarboxylase, core NJ56_02565 IPR000620 Drug/metabolite transporter NJ56_02570 IPR008249 Uncharacterised protein family UPF0231 NJ56_02575 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha NJ56_02575 IPR004406 Aconitase B, bacterial NJ56_02575 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NJ56_02575 IPR015929 Aconitase B, N-terminal, bacterial NJ56_02575 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NJ56_02575 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 NJ56_02575 IPR015933 Aconitase B, HEAT-like, bacterial NJ56_02575 IPR018136 Aconitase family, 4Fe-4S cluster binding site NJ56_02575 IPR036008 NJ56_02575 NJ56_02575 IPR036288 NJ56_02575 NJ56_02580 IPR003540 ADP ribosyltransferase NJ56_02585 IPR001100 NJ56_02585 NJ56_02585 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NJ56_02585 IPR006258 Dihydrolipoamide dehydrogenase NJ56_02585 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site NJ56_02585 IPR016156 FAD/NAD-linked reductase, dimerisation domain NJ56_02585 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain NJ56_02585 IPR036188 NJ56_02585 NJ56_02590 IPR000089 Biotin/lipoyl attachment NJ56_02590 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain NJ56_02590 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NJ56_02590 IPR004167 E3 binding NJ56_02590 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex NJ56_02590 IPR011053 Single hybrid motif NJ56_02590 IPR023213 Chloramphenicol acetyltransferase-like domain NJ56_02590 IPR036625 NJ56_02590 NJ56_02595 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type NJ56_02595 IPR005474 Transketolase, N-terminal NJ56_02595 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II NJ56_02595 IPR029061 Thiamin diphosphate-binding fold NJ56_02600 IPR000524 Transcription regulator HTH, GntR NJ56_02600 IPR008920 Transcription regulator FadR/GntR, C-terminal NJ56_02600 IPR011711 GntR, C-terminal NJ56_02600 IPR036388 NJ56_02600 NJ56_02600 IPR036390 NJ56_02600 NJ56_02610 IPR002293 Amino acid/polyamine transporter I NJ56_02610 IPR004840 Amino acid permease, conserved site NJ56_02610 IPR004841 Amino acid permease/ SLC12A domain NJ56_02615 IPR031347 NJ56_02615 NJ56_02620 IPR002502 N-acetylmuramoyl-L-alanine amidase domain NJ56_02620 IPR036505 NJ56_02620 NJ56_02625 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal NJ56_02625 IPR004393 Nicotinate-nucleotide pyrophosphorylase NJ56_02625 IPR013785 Aldolase-type TIM barrel NJ56_02625 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal NJ56_02625 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD NJ56_02625 IPR036068 NJ56_02625 NJ56_02625 IPR037128 NJ56_02625 NJ56_02630 IPR012902 Prokaryotic N-terminal methylation site NJ56_02635 IPR001482 Type II secretion system protein E NJ56_02635 IPR007831 General secretory system II, protein E, N-terminal NJ56_02635 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02635 IPR037257 NJ56_02635 NJ56_02640 IPR003004 GspF/PilC family NJ56_02640 IPR018076 Type II secretion system F domain NJ56_02645 IPR001093 IMP dehydrogenase/GMP reductase NJ56_02645 IPR005993 Guanosine monophosphate reductase 1 NJ56_02645 IPR013785 Aldolase-type TIM barrel NJ56_02645 IPR015875 IMP dehydrogenase / GMP reductase, conserved site NJ56_02650 IPR001977 Dephospho-CoA kinase NJ56_02650 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02655 IPR009777 Cell division protein ZapD NJ56_02655 IPR027462 Z ring-associated protein D, C-terminal domain NJ56_02655 IPR036268 NJ56_02655 NJ56_02660 IPR005584 DNA gyrase inhibitor YacG NJ56_02660 IPR013088 Zinc finger, NHR/GATA-type NJ56_02665 IPR000086 NUDIX hydrolase domain NJ56_02665 IPR003561 Mutator MutT NJ56_02665 IPR015797 NUDIX hydrolase domain-like NJ56_02665 IPR020084 NUDIX hydrolase, conserved site NJ56_02665 IPR020476 NUDIX hydrolase NJ56_02670 IPR000185 Protein translocase subunit SecA NJ56_02670 IPR004027 SEC-C motif NJ56_02670 IPR011115 SecA DEAD-like, N-terminal NJ56_02670 IPR011116 SecA Wing/Scaffold NJ56_02670 IPR011130 SecA preprotein, cross-linking domain NJ56_02670 IPR020937 SecA conserved site NJ56_02670 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02670 IPR036266 NJ56_02670 NJ56_02670 IPR036670 NJ56_02670 NJ56_02675 IPR009502 Secretion monitor NJ56_02680 IPR007922 Protein of unknown function DUF721/UPF0232 NJ56_02685 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase NJ56_02685 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal NJ56_02685 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal NJ56_02685 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_02690 IPR000158 Cell division protein FtsZ NJ56_02690 IPR003008 Tubulin/FtsZ, GTPase domain NJ56_02690 IPR008280 Tubulin/FtsZ, C-terminal NJ56_02690 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain NJ56_02690 IPR020805 Cell division protein FtsZ, conserved site NJ56_02690 IPR024757 Cell division protein FtsZ, C-terminal NJ56_02690 IPR036525 NJ56_02690 NJ56_02695 IPR003494 SHS2 domain inserted in FtsA NJ56_02695 IPR020823 Cell division protein FtsA NJ56_02700 IPR005548 Cell division protein FtsQ/DivIB NJ56_02700 IPR013685 Polypeptide-transport-associated, FtsQ-type NJ56_02700 IPR026579 Cell division protein FtsQ NJ56_02705 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site NJ56_02705 IPR005905 D-alanine--D-alanine ligase NJ56_02705 IPR011095 D-alanine--D-alanine ligase, C-terminal NJ56_02705 IPR011127 D-alanine--D-alanine ligase, N-terminal domain NJ56_02705 IPR013815 ATP-grasp fold, subdomain 1 NJ56_02705 IPR016185 Pre-ATP-grasp domain NJ56_02710 IPR000713 Mur ligase, N-terminal NJ56_02710 IPR004101 Mur ligase, C-terminal NJ56_02710 IPR005758 UDP-N-acetylmuramate-alanine ligase NJ56_02710 IPR013221 Mur ligase, central NJ56_02710 IPR036565 NJ56_02710 NJ56_02710 IPR036615 NJ56_02710 NJ56_02715 IPR004276 Glycosyl transferase, family 28 NJ56_02715 IPR006009 N-acetylglucosaminyltransferase, MurG NJ56_02715 IPR007235 Glycosyl transferase, family 28, C-terminal NJ56_02720 IPR001182 Cell cycle protein FtsW/RodA NJ56_02720 IPR013437 Cell division protein FtsW NJ56_02720 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site NJ56_02725 IPR004101 Mur ligase, C-terminal NJ56_02725 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase NJ56_02725 IPR013221 Mur ligase, central NJ56_02725 IPR036565 NJ56_02725 NJ56_02725 IPR036615 NJ56_02725 NJ56_02730 IPR000715 Glycosyl transferase, family 4 NJ56_02730 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase NJ56_02730 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site NJ56_02735 IPR000713 Mur ligase, N-terminal NJ56_02735 IPR004101 Mur ligase, C-terminal NJ56_02735 IPR005863 UDP-MurNAc-pentapeptide synthetase NJ56_02735 IPR013221 Mur ligase, central NJ56_02735 IPR035911 NJ56_02735 NJ56_02735 IPR036565 NJ56_02735 NJ56_02735 IPR036615 NJ56_02735 NJ56_02740 IPR000713 Mur ligase, N-terminal NJ56_02740 IPR004101 Mur ligase, C-terminal NJ56_02740 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase NJ56_02740 IPR013221 Mur ligase, central NJ56_02740 IPR035911 NJ56_02740 NJ56_02740 IPR036565 NJ56_02740 NJ56_02740 IPR036615 NJ56_02740 NJ56_02745 IPR001460 Penicillin-binding protein, transpeptidase NJ56_02745 IPR005311 Penicillin-binding protein, dimerisation domain NJ56_02745 IPR012338 Beta-lactamase/transpeptidase-like NJ56_02745 IPR036138 NJ56_02745 NJ56_02745 IPR037532 NJ56_02745 NJ56_02750 IPR011922 Cell division protein FtsL NJ56_02755 IPR002903 Ribosomal RNA small subunit methyltransferase H NJ56_02755 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain NJ56_02755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_02760 IPR003444 MraZ NJ56_02760 IPR020603 MraZ domain NJ56_02760 IPR037914 NJ56_02760 NJ56_02760 IPR038619 NJ56_02760 NJ56_02765 IPR010574 L-alanine exporter AlaE NJ56_02770 IPR001959 Transposase, probable, IS891/IS1136/IS1341 NJ56_02770 IPR010095 Transposase IS605, OrfB, C-terminal NJ56_02770 IPR021027 Transposase, putative, helix-turn-helix domain NJ56_02775 IPR002686 Transposase IS200-like NJ56_02775 IPR036515 NJ56_02775 NJ56_02780 IPR000843 Transcription regulator HTH, LacI NJ56_02780 IPR001761 Periplasmic binding protein/LacI sugar binding domain NJ56_02780 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_02780 IPR012781 D-fructose-responsive transcription factor NJ56_02780 IPR028082 Periplasmic binding protein-like I NJ56_02785 IPR002912 ACT domain NJ56_02785 IPR004789 Acetolactate synthase, small subunit NJ56_02785 IPR019455 Acetolactate synthase, small subunit, C-terminal NJ56_02785 IPR027271 NJ56_02785 NJ56_02790 IPR000399 TPP-binding enzyme, conserved site NJ56_02790 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NJ56_02790 IPR012000 Thiamine pyrophosphate enzyme, central domain NJ56_02790 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain NJ56_02790 IPR012846 Acetolactate synthase, large subunit, biosynthetic NJ56_02790 IPR029035 DHS-like NAD/FAD-binding domain NJ56_02790 IPR029061 Thiamin diphosphate-binding fold NJ56_02795 IPR000873 AMP-dependent synthetase/ligase NJ56_02795 IPR020845 AMP-binding, conserved site NJ56_02800 IPR000847 Transcription regulator HTH, LysR NJ56_02800 IPR005119 LysR, substrate-binding NJ56_02800 IPR036388 NJ56_02800 NJ56_02800 IPR036390 NJ56_02800 NJ56_02805 IPR000891 Pyruvate carboxyltransferase NJ56_02805 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site NJ56_02805 IPR005671 2-isopropylmalate synthase, bacterial-type NJ56_02805 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain NJ56_02805 IPR013785 Aldolase-type TIM barrel NJ56_02805 IPR036230 NJ56_02805 NJ56_02810 IPR004429 Isopropylmalate dehydrogenase NJ56_02810 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site NJ56_02810 IPR024084 Isopropylmalate dehydrogenase-like domain NJ56_02815 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha NJ56_02815 IPR004430 3-isopropylmalate dehydratase, large subunit NJ56_02815 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NJ56_02815 IPR018136 Aconitase family, 4Fe-4S cluster binding site NJ56_02815 IPR036008 NJ56_02815 NJ56_02820 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel NJ56_02820 IPR004431 3-isopropylmalate dehydratase, small subunit NJ56_02820 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NJ56_02825 IPR011701 Major facilitator superfamily NJ56_02825 IPR036259 NJ56_02825 NJ56_02830 IPR031767 NJ56_02830 NJ56_02835 IPR000914 Bacterial extracellular solute-binding protein, family 5 NJ56_02835 IPR023767 Transcriptional regulator SgrR NJ56_02835 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain NJ56_02835 IPR036390 NJ56_02835 NJ56_02840 IPR005948 Thiamine ABC transporter periplasmic binding protein NJ56_02840 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein NJ56_02840 IPR006059 Bacterial extracellular solute-binding, family 1 NJ56_02845 IPR000515 MetI-like domain NJ56_02845 IPR005947 Thiamine ABC transporter, permease protein NJ56_02845 IPR035906 NJ56_02845 NJ56_02850 IPR003439 ABC transporter-like NJ56_02850 IPR003593 AAA+ ATPase domain NJ56_02850 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ NJ56_02850 IPR017871 ABC transporter, conserved site NJ56_02850 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02855 IPR032816 NJ56_02855 NJ56_02860 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain NJ56_02860 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain NJ56_02860 IPR006172 DNA-directed DNA polymerase, family B NJ56_02860 IPR012337 Ribonuclease H-like domain NJ56_02860 IPR017964 DNA-directed DNA polymerase, family B, conserved site NJ56_02860 IPR023211 DNA polymerase, palm domain NJ56_02860 IPR036397 NJ56_02860 NJ56_02865 IPR000330 SNF2-related NJ56_02865 IPR001650 Helicase, C-terminal NJ56_02865 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_02865 IPR022737 RNA polymerase recycling, bacterial, C-terminal NJ56_02865 IPR023949 RNA polymerase-associated protein RapA NJ56_02865 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_02865 IPR038718 NJ56_02865 NJ56_02870 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F NJ56_02870 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NJ56_02870 IPR020103 Pseudouridine synthase, catalytic domain NJ56_02875 IPR001623 DnaJ domain NJ56_02875 IPR007791 Heat shock protein DnaJ-like protein DjlA NJ56_02875 IPR023749 DnaJ-like protein DjlA NJ56_02875 IPR029024 TerB-like NJ56_02875 IPR036869 NJ56_02875 NJ56_02880 IPR005653 Organic solvent tolerance-like, N-terminal NJ56_02880 IPR007543 Organic solvent tolerance protein, C-terminal NJ56_02880 IPR020889 Lipopolysaccharide assembly, LptD NJ56_02885 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type NJ56_02885 IPR015391 SurA N-terminal NJ56_02885 IPR023034 Peptidyl-prolyl isomerase SurA NJ56_02885 IPR027304 Trigger factor/SurA domain NJ56_02890 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA NJ56_02890 IPR037510 NJ56_02890 NJ56_02895 IPR001737 Ribosomal RNA adenine methylase transferase NJ56_02895 IPR011530 Ribosomal RNA adenine dimethylase NJ56_02895 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site NJ56_02895 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal NJ56_02895 IPR023165 rRNA adenine dimethylase-like NJ56_02895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_02900 IPR007474 ApaG domain NJ56_02900 IPR023065 Uncharacterised protein family ApaG NJ56_02900 IPR036767 NJ56_02900 NJ56_02905 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) NJ56_02905 IPR004843 Calcineurin-like phosphoesterase domain, apaH type NJ56_02905 IPR029052 Metallo-dependent phosphatase-like NJ56_02910 IPR022231 Protein of unknown function DUF3757 NJ56_02915 IPR001796 Dihydrofolate reductase domain NJ56_02915 IPR012259 Dihydrofolate reductase NJ56_02915 IPR017925 Dihydrofolate reductase conserved site NJ56_02915 IPR024072 Dihydrofolate reductase-like domain NJ56_02920 IPR020914 Uncharacterised protein family UPF0442 NJ56_02920 IPR024528 Domain of unknown function DUF3815 NJ56_02925 IPR010619 Domain of unknown function DUF1212 NJ56_02930 IPR001123 Lysine-type exporter protein (LYSE/YGGA) NJ56_02935 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NJ56_02935 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain NJ56_02935 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain NJ56_02935 IPR006275 Carbamoyl-phosphate synthase, large subunit NJ56_02935 IPR011607 Methylglyoxal synthase-like domain NJ56_02935 IPR016185 Pre-ATP-grasp domain NJ56_02935 IPR036897 NJ56_02935 NJ56_02935 IPR036914 NJ56_02935 NJ56_02940 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain NJ56_02940 IPR006274 Carbamoyl-phosphate synthase, small subunit NJ56_02940 IPR017926 Glutamine amidotransferase NJ56_02940 IPR029062 Class I glutamine amidotransferase-like NJ56_02940 IPR036480 NJ56_02940 NJ56_02945 IPR000846 Dihydrodipicolinate reductase, N-terminal NJ56_02945 IPR022663 Dihydrodipicolinate reductase, C-terminal NJ56_02945 IPR022664 Dihydrodipicolinate reductase, conserved site NJ56_02945 IPR023940 Dihydrodipicolinate reductase, bacterial NJ56_02945 IPR036291 NJ56_02945 NJ56_02950 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase NJ56_02955 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain NJ56_02960 IPR001872 Peptidase A8, signal peptidase II NJ56_02965 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NJ56_02965 IPR002300 Aminoacyl-tRNA synthetase, class Ia NJ56_02965 IPR002301 Isoleucine-tRNA ligase NJ56_02965 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain NJ56_02965 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding NJ56_02965 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase NJ56_02965 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding NJ56_02965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_02965 IPR023585 Isoleucine-tRNA ligase, type 1 NJ56_02970 IPR002606 Riboflavin kinase, bacterial NJ56_02970 IPR004821 Cytidyltransferase-like domain NJ56_02970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_02970 IPR015864 FAD synthetase NJ56_02970 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic NJ56_02970 IPR023465 Riboflavin kinase domain NJ56_02980 IPR002583 Ribosomal protein S20 NJ56_02980 IPR036510 NJ56_02980 NJ56_02985 IPR000847 Transcription regulator HTH, LysR NJ56_02985 IPR005119 LysR, substrate-binding NJ56_02985 IPR036388 NJ56_02985 NJ56_02985 IPR036390 NJ56_02985 NJ56_02990 IPR004670 Na+/H+ antiporter NhaA NJ56_02990 IPR023171 Na/H antiporter domain NJ56_02995 IPR001305 Heat shock protein DnaJ, cysteine-rich domain NJ56_02995 IPR001623 DnaJ domain NJ56_02995 IPR002939 Chaperone DnaJ, C-terminal NJ56_02995 IPR008971 HSP40/DnaJ peptide-binding NJ56_02995 IPR012724 Chaperone DnaJ NJ56_02995 IPR018253 DnaJ domain, conserved site NJ56_02995 IPR036410 NJ56_02995 NJ56_02995 IPR036869 NJ56_02995 NJ56_03000 IPR012725 Chaperone DnaK NJ56_03000 IPR013126 Heat shock protein 70 family NJ56_03000 IPR018181 Heat shock protein 70, conserved site NJ56_03000 IPR029047 Heat shock protein 70kD, peptide-binding domain NJ56_03000 IPR029048 Heat shock protein 70kD, C-terminal domain NJ56_03005 IPR000791 GPR1/FUN34/yaaH NJ56_03010 IPR011024 Gamma-crystallin-related NJ56_03010 IPR016181 Acyl-CoA N-acyltransferase NJ56_03015 IPR011701 Major facilitator superfamily NJ56_03015 IPR036259 NJ56_03015 NJ56_03020 IPR001453 Molybdopterin binding domain NJ56_03020 IPR008284 Molybdenum cofactor biosynthesis, conserved site NJ56_03020 IPR036425 NJ56_03020 NJ56_03025 IPR001585 Transaldolase NJ56_03025 IPR004730 Transaldolase type 1 NJ56_03025 IPR013785 Aldolase-type TIM barrel NJ56_03025 IPR018225 Transaldolase, active site NJ56_03030 IPR005583 Uncharacterised protein family UPF0246 NJ56_03035 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NJ56_03035 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NJ56_03035 IPR004450 Threonine synthase-like NJ56_03035 IPR029144 Threonine synthase, N-terminal NJ56_03035 IPR036052 NJ56_03035 NJ56_03035 IPR037158 NJ56_03035 NJ56_03040 IPR000870 Homoserine kinase NJ56_03040 IPR006203 GHMP kinase, ATP-binding, conserved site NJ56_03040 IPR006204 GHMP kinase N-terminal domain NJ56_03040 IPR013750 GHMP kinase, C-terminal domain NJ56_03040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_03040 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_03040 IPR036554 NJ56_03040 NJ56_03045 IPR001048 Aspartate/glutamate/uridylate kinase NJ56_03045 IPR001341 Aspartate kinase domain NJ56_03045 IPR001342 Homoserine dehydrogenase, catalytic NJ56_03045 IPR002912 ACT domain NJ56_03045 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding NJ56_03045 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I NJ56_03045 IPR018042 Aspartate kinase, conserved site NJ56_03045 IPR019811 Homoserine dehydrogenase, conserved site NJ56_03045 IPR027795 GATS-like ACT domain NJ56_03045 IPR036291 NJ56_03045 NJ56_03045 IPR036393 NJ56_03045 NJ56_03050 IPR011720 Thr operon leader peptide NJ56_03055 IPR001789 Signal transduction response regulator, receiver domain NJ56_03055 IPR001867 Signal transduction response regulator, C-terminal NJ56_03055 IPR011006 CheY-like superfamily NJ56_03055 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_03055 IPR036388 NJ56_03055 NJ56_03060 IPR010292 Uncharacterised protein family CreA NJ56_03065 IPR009057 Homeodomain-like NJ56_03065 IPR010499 Bacterial transcription activator, effector binding NJ56_03065 IPR011256 Regulatory factor, effector binding domain NJ56_03065 IPR018060 DNA binding HTH domain, AraC-type NJ56_03065 IPR018062 HTH domain AraC-type, conserved site NJ56_03065 IPR020449 Transcription regulator HTH, AraC- type NJ56_03065 IPR029442 GyrI-like small molecule binding domain NJ56_03070 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site NJ56_03070 IPR013078 Histidine phosphatase superfamily, clade-1 NJ56_03070 IPR023086 Phosphoglycerate mutase, GpmB, probable NJ56_03070 IPR029033 Histidine phosphatase superfamily NJ56_03075 IPR002786 Non-canonical purine NTP phosphatase NJ56_03075 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 NJ56_03075 IPR029001 Inosine triphosphate pyrophosphatase-like NJ56_03080 IPR000831 Trp repressor NJ56_03080 IPR010921 Trp repressor/replication initiator NJ56_03080 IPR013335 Trp repressor, bacterial NJ56_03080 IPR038116 NJ56_03080 NJ56_03085 IPR000189 Prokaryotic transglycosylase, active site NJ56_03085 IPR008258 Lytic transglycosylase-like SLT domain NJ56_03085 IPR008939 Lytic transglycosylase, superhelical U-shaped NJ56_03085 IPR012289 Lytic transglycosylase, superhelical linker NJ56_03085 IPR023346 Lysozyme-like domain NJ56_03085 IPR037061 NJ56_03085 NJ56_03090 IPR001757 Cation-transporting P-type ATPase NJ56_03090 IPR004014 Cation-transporting P-type ATPase, N-terminal NJ56_03090 IPR006068 Cation-transporting P-type ATPase, C-terminal NJ56_03090 IPR008250 P-type ATPase, A domain NJ56_03090 IPR018303 P-type ATPase, phosphorylation site NJ56_03090 IPR023214 HAD-like domain NJ56_03090 IPR023298 P-type ATPase, transmembrane domain NJ56_03090 IPR023299 P-type ATPase, cytoplasmic domain N NJ56_03090 IPR036412 NJ56_03090 NJ56_03095 IPR033417 NJ56_03095 NJ56_03105 IPR003439 ABC transporter-like NJ56_03105 IPR003593 AAA+ ATPase domain NJ56_03105 IPR017871 ABC transporter, conserved site NJ56_03105 IPR022374 ABC transporter, ATP-binding protein, ChvD NJ56_03105 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03105 IPR032781 NJ56_03105 NJ56_03110 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_03110 IPR004821 Cytidyltransferase-like domain NJ56_03110 IPR006417 Nicotinamide-nucleotide adenylyltransferase NJ56_03110 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_03110 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_03110 IPR016429 Bifunctional transcriptional regulator NadR NJ56_03110 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03110 IPR038727 NJ56_03110 NJ56_03115 IPR003593 AAA+ ATPase domain NJ56_03115 IPR004504 DNA repair protein RadA NJ56_03115 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_03115 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_03115 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03120 IPR023190 Phosphoserine phosphatase, domain 2 NJ56_03120 IPR023214 HAD-like domain NJ56_03120 IPR036412 NJ56_03120 NJ56_03125 IPR019305 Uncharacterised protein family Smp NJ56_03130 IPR000845 Nucleoside phosphorylase domain NJ56_03130 IPR004402 Purine nucleoside phosphorylase DeoD-type NJ56_03130 IPR018016 Nucleoside phosphorylase, conserved site NJ56_03130 IPR035994 NJ56_03130 NJ56_03135 IPR006124 Metalloenzyme NJ56_03135 IPR010045 Phosphopentomutase NJ56_03135 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha NJ56_03135 IPR017850 Alkaline-phosphatase-like, core domain NJ56_03135 IPR024052 Phosphopentomutase DeoB cap domain NJ56_03140 IPR000053 Pyrimidine-nucleoside phosphorylase NJ56_03140 IPR000312 Glycosyl transferase, family 3 NJ56_03140 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal NJ56_03140 IPR013465 Thymidine phosphorylase NJ56_03140 IPR017459 Glycosyl transferase family 3, N-terminal domain NJ56_03140 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site NJ56_03140 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic NJ56_03140 IPR035902 NJ56_03140 NJ56_03140 IPR036320 NJ56_03140 NJ56_03140 IPR036566 NJ56_03140 NJ56_03145 IPR002915 DeoC/FbaB/ lacD aldolase NJ56_03145 IPR011343 Deoxyribose-phosphate aldolase NJ56_03145 IPR013785 Aldolase-type TIM barrel NJ56_03145 IPR023649 Deoxyribose-phosphate aldolase type II NJ56_03150 IPR002668 Concentrative nucleoside transporter N-terminal domain NJ56_03150 IPR011642 Nucleoside recognition Gate NJ56_03150 IPR011657 Concentrative nucleoside transporter C-terminal domain NJ56_03150 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial NJ56_03155 IPR001130 TatD family NJ56_03155 IPR018228 Deoxyribonuclease, TatD-related, conserved site NJ56_03155 IPR032466 NJ56_03155 NJ56_03160 IPR002641 Patatin/Phospholipase A2-related NJ56_03160 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NJ56_03165 IPR009760 Protein of unknown function DUF1328 NJ56_03170 IPR007055 BON domain NJ56_03170 IPR014004 Transport-associated and nodulation domain, bacteria NJ56_03175 IPR000795 Elongation factor, GTP-binding domain NJ56_03175 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 NJ56_03175 IPR004548 Peptide chain release factor 3 NJ56_03175 IPR005225 Small GTP-binding protein domain NJ56_03175 IPR009000 Translation protein, beta-barrel domain NJ56_03175 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03175 IPR031157 NJ56_03175 NJ56_03175 IPR032090 NJ56_03175 NJ56_03175 IPR035647 NJ56_03175 NJ56_03175 IPR038467 NJ56_03175 NJ56_03180 IPR000182 GNAT domain NJ56_03180 IPR006464 Ribosomal-protein-alanine acetyltransferase NJ56_03180 IPR016181 Acyl-CoA N-acyltransferase NJ56_03185 IPR004615 DNA polymerase III, psi subunit NJ56_03185 IPR036654 NJ56_03185 NJ56_03190 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_03190 IPR007848 Methyltransferase small domain NJ56_03190 IPR013675 Methyltransferase small, N-terminal NJ56_03190 IPR023543 rRNA small subunit methyltransferase C NJ56_03190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_03210 IPR009885 Protein of unknown function DUF1435 NJ56_03215 IPR000160 GGDEF domain NJ56_03215 IPR029787 Nucleotide cyclase NJ56_03220 IPR000014 PAS domain NJ56_03220 IPR002078 RNA polymerase sigma factor 54 interaction domain NJ56_03220 IPR002197 DNA binding HTH domain, Fis-type NJ56_03220 IPR009057 Homeodomain-like NJ56_03220 IPR013767 PAS fold NJ56_03220 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NJ56_03220 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03220 IPR029016 GAF domain-like NJ56_03220 IPR035965 NJ56_03220 NJ56_03225 IPR000032 Phosphocarrier HPr protein-like NJ56_03225 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site NJ56_03225 IPR004701 Phosphotransferase system, mannose-type IIA component NJ56_03225 IPR008279 PEP-utilising enzyme, mobile domain NJ56_03225 IPR008731 Phosphotransferase system, enzyme I N-terminal NJ56_03225 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain NJ56_03225 IPR035895 NJ56_03225 NJ56_03225 IPR036618 NJ56_03225 NJ56_03225 IPR036637 NJ56_03225 NJ56_03225 IPR036662 NJ56_03225 NJ56_03230 IPR004007 DhaL domain NJ56_03230 IPR012737 Dihydroxyacetone kinase, subunit L NJ56_03230 IPR036117 NJ56_03230 NJ56_03235 IPR004006 Dak kinase NJ56_03235 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 NJ56_03240 IPR001670 Alcohol dehydrogenase, iron-type NJ56_03240 IPR016205 Glycerol dehydrogenase NJ56_03240 IPR018211 Alcohol dehydrogenase, iron-type, conserved site NJ56_03245 IPR001036 Acriflavin resistance protein NJ56_03245 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NJ56_03250 IPR006143 RND efflux pump, membrane fusion protein NJ56_03250 IPR032317 NJ56_03250 NJ56_03255 IPR010445 Protein of unknown function DUF1049 NJ56_03260 IPR007016 O-antigen ligase-related NJ56_03265 IPR002201 Glycosyl transferase, family 9 NJ56_03265 IPR011916 Lipopolysaccharide heptosyltransferase III, putative NJ56_03270 IPR019637 Protein of unknown function DUF2501 NJ56_03275 IPR002818 ThiJ/PfpI NJ56_03275 IPR029062 Class I glutamine amidotransferase-like NJ56_03280 IPR000771 Ketose-bisphosphate aldolase, class-II NJ56_03280 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY NJ56_03280 IPR013785 Aldolase-type TIM barrel NJ56_03285 IPR016624 Uncharacterised conserved protein UCP014753 NJ56_03290 IPR000917 Sulfatase NJ56_03290 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha NJ56_03290 IPR017850 Alkaline-phosphatase-like, core domain NJ56_03290 IPR024607 Sulfatase, conserved site NJ56_03295 IPR007197 Radical SAM NJ56_03295 IPR013785 Aldolase-type TIM barrel NJ56_03295 IPR023885 4Fe4S-binding SPASM domain NJ56_03300 IPR008928 Six-hairpin glycosidase-like NJ56_03300 IPR010905 Glycosyl hydrolase, family 88 NJ56_03300 IPR012341 Six-hairpin glycosidase NJ56_03305 IPR002347 Glucose/ribitol dehydrogenase NJ56_03305 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase NJ56_03305 IPR020904 Short-chain dehydrogenase/reductase, conserved site NJ56_03305 IPR036291 NJ56_03305 NJ56_03310 IPR007045 5-keto 4-deoxyuronate isomerase NJ56_03310 IPR011051 RmlC-like cupin domain NJ56_03310 IPR014710 RmlC-like jelly roll fold NJ56_03310 IPR021120 KduI/IolB isomerase NJ56_03310 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain NJ56_03315 IPR003764 N-acetylglucosamine-6-phosphate deacetylase NJ56_03315 IPR006680 Amidohydrolase 1 NJ56_03315 IPR011059 Metal-dependent hydrolase, composite domain NJ56_03315 IPR032466 NJ56_03315 NJ56_03320 IPR004701 Phosphotransferase system, mannose-type IIA component NJ56_03320 IPR036662 NJ56_03320 NJ56_03325 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component NJ56_03330 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit NJ56_03335 IPR004720 Phosphotransferase system, sorbose subfamily IIB component NJ56_03335 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup NJ56_03335 IPR036667 NJ56_03335 NJ56_03340 IPR001347 Sugar isomerase (SIS) NJ56_03340 IPR014180 Sugar isomerase, AgaS NJ56_03345 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ NJ56_03345 IPR013785 Aldolase-type TIM barrel NJ56_03350 IPR001034 HTH DeoR N-terminal domain NJ56_03350 IPR014036 DeoR C-terminal sensor domain NJ56_03350 IPR036388 NJ56_03350 NJ56_03350 IPR036390 NJ56_03350 NJ56_03350 IPR037171 NJ56_03350 NJ56_03355 IPR000917 Sulfatase NJ56_03355 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha NJ56_03355 IPR017850 Alkaline-phosphatase-like, core domain NJ56_03360 IPR003159 Polysaccharide lyase family 8, central domain NJ56_03360 IPR008929 Chondroitin AC/alginate lyase NJ56_03360 IPR008979 Galactose-binding domain-like NJ56_03360 IPR011013 Galactose mutarotase-like domain NJ56_03360 IPR011071 Polysaccharide lyase family 8-like, C-terminal NJ56_03360 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup NJ56_03360 IPR015176 Lyase, N-terminal NJ56_03360 IPR015177 Lyase, catalytic NJ56_03360 IPR024200 Chondroitin sulfate ABC endolyase NJ56_03365 IPR005546 Autotransporter beta-domain NJ56_03365 IPR006315 Outer membrane autotransporter barrel NJ56_03365 IPR036709 NJ56_03365 NJ56_03370 IPR031605 NJ56_03370 NJ56_03375 IPR003159 Polysaccharide lyase family 8, central domain NJ56_03375 IPR004103 Polysaccharide lyase family 8, C-terminal NJ56_03375 IPR008929 Chondroitin AC/alginate lyase NJ56_03375 IPR011013 Galactose mutarotase-like domain NJ56_03375 IPR011071 Polysaccharide lyase family 8-like, C-terminal NJ56_03375 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical NJ56_03375 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup NJ56_03380 IPR009331 Oligogalacturonate-specific porin NJ56_03385 IPR006652 Kelch repeat type 1 NJ56_03385 IPR015915 Kelch-type beta propeller NJ56_03385 IPR019936 Mutatrotase, YjhT-like NJ56_03390 IPR009320 YagB/YeeU/YfjZ NJ56_03390 IPR038025 NJ56_03390 NJ56_03395 IPR004914 Antirestriction protein NJ56_03400 IPR014942 Protein of unknown function DUF1814 NJ56_03405 IPR025159 Domain of unknown function DUF4095 NJ56_03410 IPR031339 NJ56_03410 NJ56_03440 IPR002589 Macro domain NJ56_03445 IPR029494 Domain of unknown function DUF4433 NJ56_03450 IPR029494 Domain of unknown function DUF4433 NJ56_03455 IPR000055 Restriction endonuclease, type I, HsdS NJ56_03460 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family NJ56_03460 IPR035093 NJ56_03460 NJ56_03465 IPR007337 RelB antitoxin/Antitoxin DinJ NJ56_03465 IPR013321 Arc-type ribbon-helix-helix NJ56_03490 IPR000209 Peptidase S8/S53 domain NJ56_03490 IPR036852 NJ56_03490 NJ56_03495 IPR003593 AAA+ ATPase domain NJ56_03495 IPR003959 ATPase, AAA-type, core NJ56_03495 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03510 IPR010260 Bacteriophage P4, Orf88 NJ56_03525 IPR021696 Protein of unknown function DUF3279 NJ56_03540 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03550 IPR004603 DNA mismatch endonuclease vsr NJ56_03550 IPR011335 Restriction endonuclease type II-like NJ56_03555 IPR001525 C-5 cytosine methyltransferase NJ56_03555 IPR018117 DNA methylase, C-5 cytosine-specific, active site NJ56_03555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_03555 IPR031303 NJ56_03555 NJ56_03560 IPR011335 Restriction endonuclease type II-like NJ56_03560 IPR015109 Restriction endonuclease, type II, EcoRII, C-terminal NJ56_03560 IPR038365 NJ56_03560 NJ56_03565 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03565 IPR027785 UvrD-like helicase C-terminal domain NJ56_03570 IPR018742 Protein of unknown function DUF2290 NJ56_03585 IPR002104 Integrase, catalytic NJ56_03585 IPR010998 Integrase, Lambda-type, N-terminal NJ56_03585 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_03585 IPR013762 Integrase-like, catalytic core NJ56_03585 IPR018247 EF-Hand 1, calcium-binding site NJ56_03585 IPR025166 Domain of unknown function DUF4102 NJ56_03585 IPR038488 NJ56_03585 NJ56_03595 IPR005495 Permease YjgP/YjgQ, predicted NJ56_03595 IPR030923 NJ56_03595 NJ56_03600 IPR005495 Permease YjgP/YjgQ, predicted NJ56_03600 IPR030922 NJ56_03600 NJ56_03605 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal NJ56_03605 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal NJ56_03605 IPR011356 Leucine aminopeptidase/peptidase B NJ56_03605 IPR023042 Peptidase M17, leucine aminopeptidase NJ56_03610 IPR007459 DNA polymerase III chi subunit, HolC NJ56_03610 IPR036768 NJ56_03610 NJ56_03615 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NJ56_03615 IPR002300 Aminoacyl-tRNA synthetase, class Ia NJ56_03615 IPR002303 Valine-tRNA ligase NJ56_03615 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain NJ56_03615 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding NJ56_03615 IPR010978 tRNA-binding arm NJ56_03615 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding NJ56_03615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_03615 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm NJ56_03615 IPR037118 NJ56_03615 NJ56_03620 IPR000182 GNAT domain NJ56_03620 IPR016181 Acyl-CoA N-acyltransferase NJ56_03625 IPR009671 Regulator of ribonuclease activity B domain NJ56_03625 IPR016716 Regulator of ribonuclease activity B NJ56_03625 IPR036701 NJ56_03625 NJ56_03630 IPR002292 Ornithine/putrescine carbamoyltransferase NJ56_03630 IPR006130 Aspartate/ornithine carbamoyltransferase NJ56_03630 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain NJ56_03630 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding NJ56_03630 IPR024904 Ornithine carbamoyltransferase NJ56_03630 IPR036901 NJ56_03630 NJ56_03635 IPR005144 ATP-cone NJ56_03635 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic NJ56_03635 IPR019777 Formate C-acetyltransferase glycine radical, conserved site NJ56_03640 IPR001989 Radical-activating enzyme, conserved site NJ56_03640 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic NJ56_03640 IPR013785 Aldolase-type TIM barrel NJ56_03645 IPR009609 Phosphonate metabolism PhnG NJ56_03650 IPR008772 Bacterial phosphonate metabolism, PhnH NJ56_03650 IPR038058 NJ56_03650 NJ56_03655 IPR008773 Phosphonate metabolism protein PhnI NJ56_03660 IPR010306 Phosphonate metabolism PhnJ NJ56_03665 IPR003439 ABC transporter-like NJ56_03665 IPR003593 AAA+ ATPase domain NJ56_03665 IPR012700 Phosphonate C-P lyase system, PhnK NJ56_03665 IPR017871 ABC transporter, conserved site NJ56_03665 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03670 IPR003439 ABC transporter-like NJ56_03670 IPR003593 AAA+ ATPase domain NJ56_03670 IPR012701 Phosphonate C-P lyase system, PhnL NJ56_03670 IPR017871 ABC transporter, conserved site NJ56_03670 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03675 IPR006680 Amidohydrolase 1 NJ56_03675 IPR011059 Metal-dependent hydrolase, composite domain NJ56_03675 IPR012696 Phosphonate metabolism PhnM NJ56_03675 IPR032466 NJ56_03675 NJ56_03680 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NJ56_03680 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN NJ56_03680 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03685 IPR001279 Beta-lactamase-like NJ56_03685 IPR017693 Phosphonate metabolism protein PhnP NJ56_03685 IPR036866 NJ56_03685 NJ56_03690 IPR000534 Semialdehyde dehydrogenase, NAD-binding NJ56_03690 IPR036291 NJ56_03690 NJ56_03695 IPR011194 Uncharacterised protein family UPF0306 NJ56_03695 IPR012349 FMN-binding split barrel NJ56_03700 IPR000310 Orn/Lys/Arg decarboxylase, major domain NJ56_03700 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal NJ56_03700 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal NJ56_03700 IPR011006 CheY-like superfamily NJ56_03700 IPR011193 Ornithine/lysine/arginine decarboxylase NJ56_03700 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_03700 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_03700 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_03700 IPR027464 Ornithine decarboxylase, N-terminal domain NJ56_03700 IPR027568 Ornithine decarboxylase SpeF NJ56_03700 IPR036633 NJ56_03700 NJ56_03705 IPR002293 Amino acid/polyamine transporter I NJ56_03705 IPR004754 Amino acid antiporter NJ56_03705 IPR027566 Putrescine-ornithine antiporter NJ56_03710 IPR000305 GIY-YIG nuclease superfamily NJ56_03710 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease NJ56_03710 IPR035901 NJ56_03710 NJ56_03715 IPR000182 GNAT domain NJ56_03715 IPR016181 Acyl-CoA N-acyltransferase NJ56_03720 IPR003033 SCP2 sterol-binding domain NJ56_03720 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT NJ56_03720 IPR036527 NJ56_03720 NJ56_03725 IPR001539 Peptidase U32 NJ56_03725 IPR036206 NJ56_03725 NJ56_03730 IPR001539 Peptidase U32 NJ56_03735 IPR005130 Serine dehydratase-like, alpha subunit NJ56_03735 IPR021144 Uncharacterised protein family UPF0597 NJ56_03745 IPR011251 Luciferase-like domain NJ56_03745 IPR019949 Luciferase family oxidoreductase, group 1 NJ56_03745 IPR036661 NJ56_03745 NJ56_03750 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site NJ56_03750 IPR001650 Helicase, C-terminal NJ56_03750 IPR005580 DbpA, RNA-binding NJ56_03750 IPR011545 DEAD/DEAH box helicase domain NJ56_03750 IPR012677 Nucleotide-binding, alpha-beta plait NJ56_03750 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_03750 IPR021046 Cold-shock protein, DEAD box A, C-terminal NJ56_03750 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03750 IPR028618 ATP-dependent RNA helicase DeaD NJ56_03760 IPR011990 Tetratricopeptide-like helical domain NJ56_03760 IPR013105 Tetratricopeptide TPR2 NJ56_03760 IPR019734 Tetratricopeptide repeat NJ56_03760 IPR023605 Lipoprotein NlpI NJ56_03765 IPR001247 Exoribonuclease, phosphorolytic domain 1 NJ56_03765 IPR003029 Ribosomal protein S1, RNA-binding domain NJ56_03765 IPR004087 K Homology domain NJ56_03765 IPR004088 K Homology domain, type 1 NJ56_03765 IPR012162 Polyribonucleotide nucleotidyltransferase NJ56_03765 IPR012340 Nucleic acid-binding, OB-fold NJ56_03765 IPR015847 Exoribonuclease, phosphorolytic domain 2 NJ56_03765 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain NJ56_03765 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_03765 IPR022967 RNA-binding domain, S1 NJ56_03765 IPR027408 PNPase/RNase PH domain NJ56_03765 IPR036345 NJ56_03765 NJ56_03765 IPR036612 NJ56_03765 NJ56_03770 IPR000589 Ribosomal protein S15 NJ56_03770 IPR005290 Ribosomal protein S15, bacterial-type NJ56_03770 IPR009068 S15/NS1, RNA-binding NJ56_03775 IPR002501 Pseudouridine synthase II NJ56_03775 IPR014780 tRNA pseudouridine synthase II, TruB NJ56_03775 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal NJ56_03775 IPR015947 PUA-like domain NJ56_03775 IPR020103 Pseudouridine synthase, catalytic domain NJ56_03775 IPR032819 NJ56_03775 NJ56_03775 IPR036974 NJ56_03775 NJ56_03780 IPR000238 Ribosome-binding factor A NJ56_03780 IPR015946 K homology domain-like, alpha/beta NJ56_03780 IPR020053 Ribosome-binding factor A, conserved site NJ56_03780 IPR023799 Ribosome-binding factor A domain NJ56_03785 IPR000178 Translation initiation factor aIF-2, bacterial-like NJ56_03785 IPR000795 Elongation factor, GTP-binding domain NJ56_03785 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 NJ56_03785 IPR005225 Small GTP-binding protein domain NJ56_03785 IPR006847 Translation initiation factor IF-2, N-terminal NJ56_03785 IPR009000 Translation protein, beta-barrel domain NJ56_03785 IPR009061 DNA binding domain, putative NJ56_03785 IPR013575 Initiation factor 2 associated domain, bacterial NJ56_03785 IPR023115 Translation initiation factor IF- 2, domain 3 NJ56_03785 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03785 IPR036925 NJ56_03785 NJ56_03790 IPR004087 K Homology domain NJ56_03790 IPR009019 K homology domain, prokaryotic type NJ56_03790 IPR010213 Transcription termination factor NusA NJ56_03790 IPR010214 Transcription termination factor NusA, C-terminal duplication NJ56_03790 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical NJ56_03790 IPR012340 Nucleic acid-binding, OB-fold NJ56_03790 IPR013735 Transcription factor NusA, N-terminal NJ56_03790 IPR015946 K homology domain-like, alpha/beta NJ56_03790 IPR022967 RNA-binding domain, S1 NJ56_03790 IPR025249 KH domain, NusA-like NJ56_03790 IPR030842 NJ56_03790 NJ56_03790 IPR036555 NJ56_03790 NJ56_03795 IPR003728 Ribosome maturation factor RimP NJ56_03795 IPR028989 Ribosome maturation factor RimP, N-terminal NJ56_03795 IPR028998 Ribosome maturation factor RimP, C-terminal NJ56_03795 IPR035956 NJ56_03795 NJ56_03795 IPR036847 NJ56_03795 NJ56_03810 IPR004692 Preprotein translocase SecG subunit NJ56_03815 IPR005841 Alpha-D-phosphohexomutase superfamily NJ56_03815 IPR005843 Alpha-D-phosphohexomutase, C-terminal NJ56_03815 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I NJ56_03815 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II NJ56_03815 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III NJ56_03815 IPR006352 Phosphoglucosamine mutase NJ56_03815 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III NJ56_03815 IPR016066 Alpha-D-phosphohexomutase, conserved site NJ56_03815 IPR036900 NJ56_03815 NJ56_03820 IPR000489 Pterin-binding NJ56_03820 IPR006390 Dihydropteroate synthase NJ56_03820 IPR011005 Dihydropteroate synthase-like NJ56_03825 IPR000642 Peptidase M41 NJ56_03825 IPR003593 AAA+ ATPase domain NJ56_03825 IPR003959 ATPase, AAA-type, core NJ56_03825 IPR003960 ATPase, AAA-type, conserved site NJ56_03825 IPR005936 Peptidase, FtsH NJ56_03825 IPR011546 Peptidase M41, FtsH extracellular NJ56_03825 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03825 IPR037219 NJ56_03825 NJ56_03830 IPR002877 Ribosomal RNA methyltransferase FtsJ domain NJ56_03830 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria NJ56_03830 IPR015507 Ribosomal RNA large subunit methyltransferase E NJ56_03830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_03835 IPR001890 RNA-binding, CRM domain NJ56_03835 IPR017924 RNA-binding protein YhbY NJ56_03835 IPR035920 NJ56_03835 NJ56_03840 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal NJ56_03840 IPR006359 Transcription elongation factor GreA NJ56_03840 IPR018151 Transcription elongation factor, GreA/GreB, conserved site NJ56_03840 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal NJ56_03840 IPR023459 Transcription elongation factor GreA/GreB family NJ56_03840 IPR028624 Transcription elongation factor GreA/GreB NJ56_03840 IPR036805 NJ56_03840 NJ56_03840 IPR036953 NJ56_03840 NJ56_03845 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C NJ56_03845 IPR012338 Beta-lactamase/transpeptidase-like NJ56_03850 IPR001789 Signal transduction response regulator, receiver domain NJ56_03850 IPR001867 Signal transduction response regulator, C-terminal NJ56_03850 IPR011006 CheY-like superfamily NJ56_03850 IPR036388 NJ56_03850 NJ56_03855 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_03855 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_03855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_03855 IPR036097 NJ56_03855 NJ56_03855 IPR036890 NJ56_03855 NJ56_03860 IPR006073 GTP binding domain NJ56_03860 IPR006074 GTP1/OBG, conserved site NJ56_03860 IPR006169 GTP1/OBG domain NJ56_03860 IPR014100 GTP-binding protein Obg/CgtA NJ56_03860 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_03860 IPR035101 NJ56_03860 NJ56_03860 IPR036726 NJ56_03860 NJ56_03865 IPR000620 Drug/metabolite transporter NJ56_03870 IPR001684 Ribosomal protein L27 NJ56_03870 IPR018261 Ribosomal protein L27, conserved site NJ56_03875 IPR001787 Ribosomal protein L21 NJ56_03875 IPR018258 Ribosomal protein L21, conserved site NJ56_03875 IPR028909 Ribosomal protein L21-like NJ56_03875 IPR036164 NJ56_03875 NJ56_03880 IPR000092 Polyprenyl synthetase NJ56_03880 IPR008949 Terpenoid synthase NJ56_03880 IPR033749 NJ56_03880 NJ56_03885 IPR003314 Transposase MuA/Repressor CI, DNA-binding NJ56_03885 IPR009061 DNA binding domain, putative NJ56_03885 IPR036388 NJ56_03885 NJ56_03890 IPR003314 Transposase MuA/Repressor CI, DNA-binding NJ56_03890 IPR009061 DNA binding domain, putative NJ56_03890 IPR010749 Protein of unknown function DUF1323 NJ56_03890 IPR036388 NJ56_03890 NJ56_03895 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_03895 IPR038722 NJ56_03895 NJ56_03900 IPR001236 Lactate/malate dehydrogenase, N-terminal NJ56_03900 IPR001252 Malate dehydrogenase, active site NJ56_03900 IPR001557 L-lactate/malate dehydrogenase NJ56_03900 IPR010097 Malate dehydrogenase, type 1 NJ56_03900 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal NJ56_03900 IPR022383 Lactate/malate dehydrogenase, C-terminal NJ56_03900 IPR023958 Malate dehydrogenase, type 1, bacterial NJ56_03900 IPR036291 NJ56_03900 NJ56_03905 IPR001669 Arginine repressor NJ56_03905 IPR020899 Arginine repressor, C-terminal NJ56_03905 IPR020900 Arginine repressor, DNA-binding domain NJ56_03905 IPR036251 NJ56_03905 NJ56_03905 IPR036388 NJ56_03905 NJ56_03905 IPR036390 NJ56_03905 NJ56_03910 IPR000713 Mur ligase, N-terminal NJ56_03910 IPR004101 Mur ligase, C-terminal NJ56_03910 IPR005757 Murein peptide ligase NJ56_03910 IPR013221 Mur ligase, central NJ56_03910 IPR036565 NJ56_03910 NJ56_03910 IPR036615 NJ56_03910 NJ56_03915 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase NJ56_03915 IPR020548 Fructose-1,6-bisphosphatase, active site NJ56_03915 IPR028343 Fructose-1,6-bisphosphatase NJ56_03915 IPR033391 NJ56_03915 NJ56_03920 IPR008162 Inorganic pyrophosphatase NJ56_03920 IPR036649 NJ56_03920 NJ56_03925 IPR009288 AIG2-like NJ56_03925 IPR036568 NJ56_03925 NJ56_03930 IPR007452 Protein of unknown function DUF490 NJ56_03935 IPR000184 Bacterial surface antigen (D15) NJ56_03935 IPR010827 Surface antigen variable number NJ56_03935 IPR035243 NJ56_03935 NJ56_03940 IPR002569 Peptide methionine sulphoxide reductase MsrA NJ56_03940 IPR036509 NJ56_03940 NJ56_03945 IPR000644 CBS domain NJ56_03945 IPR002550 Domain of unknown function DUF21 NJ56_03945 IPR005170 Transporter-associated domain NJ56_03945 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 NJ56_03945 IPR036318 NJ56_03945 NJ56_03950 IPR009491 Protein of unknown function DUF1107 NJ56_03955 IPR006513 Conserved hypothetical protein CHP01626, YtfJ NJ56_03955 IPR036249 NJ56_03955 NJ56_03960 IPR000760 Inositol monophosphatase NJ56_03960 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial NJ56_03960 IPR020550 Inositol monophosphatase, conserved site NJ56_03960 IPR020583 Inositol monophosphatase, metal-binding site NJ56_03965 IPR004843 Calcineurin-like phosphoesterase domain, apaH type NJ56_03965 IPR006146 5'-Nucleotidase, conserved site NJ56_03965 IPR006179 5'-Nucleotidase/apyrase NJ56_03965 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase NJ56_03965 IPR008334 5'-Nucleotidase, C-terminal NJ56_03965 IPR029052 Metallo-dependent phosphatase-like NJ56_03965 IPR036907 NJ56_03965 NJ56_03970 IPR012312 Haemerythrin/HHE cation-binding motif NJ56_03970 IPR019903 Repair of iron centres family NJ56_03975 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal NJ56_03975 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain NJ56_03975 IPR036944 NJ56_03975 NJ56_03980 IPR007340 Opacity-associated protein A NJ56_03980 IPR013731 Opacity-associated protein A, N-terminal NJ56_03985 IPR009027 Ribosomal protein L9/RNase H1, N-terminal NJ56_03985 IPR020069 Ribosomal protein L9, C-terminal NJ56_03985 IPR020070 Ribosomal protein L9, N-terminal NJ56_03985 IPR020594 Ribosomal protein L9, bacteria/chloroplast NJ56_03985 IPR036791 NJ56_03985 NJ56_03985 IPR036935 NJ56_03985 NJ56_03990 IPR001648 Ribosomal protein S18 NJ56_03990 IPR018275 Ribosomal protein S18, conserved site NJ56_03990 IPR036870 NJ56_03990 NJ56_03995 IPR000424 Primosome PriB/single-strand DNA-binding NJ56_03995 IPR012340 Nucleic acid-binding, OB-fold NJ56_03995 IPR023646 Primosomal replication protein PriB NJ56_04000 IPR000529 Ribosomal protein S6 NJ56_04000 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 NJ56_04000 IPR020814 Ribosomal protein S6, plastid/chloroplast NJ56_04000 IPR020815 Ribosomal protein S6, conserved site NJ56_04000 IPR035980 NJ56_04000 NJ56_04010 IPR010854 Domain of unknown function DUF1471 NJ56_04010 IPR025543 Dodecin-like NJ56_04010 IPR036275 NJ56_04010 NJ56_04015 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain NJ56_04015 IPR029058 Alpha/Beta hydrolase fold NJ56_04020 IPR010854 Domain of unknown function DUF1471 NJ56_04020 IPR025543 Dodecin-like NJ56_04020 IPR036275 NJ56_04020 NJ56_04025 IPR010546 Protein of unknown function DUF1120 NJ56_04035 IPR000015 Outer membrane usher protein NJ56_04035 IPR025885 PapC, N-terminal domain NJ56_04035 IPR025949 PapC-like, C-terminal domain NJ56_04035 IPR037224 NJ56_04035 NJ56_04040 IPR001829 Pili assembly chaperone, bacterial NJ56_04040 IPR008962 PapD-like NJ56_04040 IPR013783 Immunoglobulin-like fold NJ56_04040 IPR016147 PapD, N-terminal, bacterial NJ56_04045 IPR010546 Protein of unknown function DUF1120 NJ56_04050 IPR010546 Protein of unknown function DUF1120 NJ56_04055 IPR010546 Protein of unknown function DUF1120 NJ56_04060 IPR001537 tRNA/rRNA methyltransferase, SpoU type NJ56_04060 IPR004441 RNA methyltransferase TrmH family NJ56_04060 IPR013123 RNA 2-O ribose methyltransferase, substrate binding NJ56_04060 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB NJ56_04060 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NJ56_04060 IPR029028 Alpha/beta knot methyltransferases NJ56_04060 IPR029064 50S ribosomal protein L30e-like NJ56_04065 IPR001900 NJ56_04065 NJ56_04065 IPR003029 Ribosomal protein S1, RNA-binding domain NJ56_04065 IPR004476 Ribonuclease II/ribonuclease R NJ56_04065 IPR011129 Cold shock protein NJ56_04065 IPR011805 Ribonuclease R NJ56_04065 IPR012340 Nucleic acid-binding, OB-fold NJ56_04065 IPR013223 Ribonuclease B, N-terminal OB domain NJ56_04065 IPR013668 Ribonuclease R winged-helix domain NJ56_04065 IPR022967 RNA-binding domain, S1 NJ56_04070 IPR000944 Transcription regulator Rrf2-like NJ56_04070 IPR023761 Transcriptional repressor HTH, NsrR NJ56_04070 IPR030489 NJ56_04070 NJ56_04070 IPR036388 NJ56_04070 NJ56_04070 IPR036390 NJ56_04070 NJ56_04075 IPR001114 Adenylosuccinate synthetase NJ56_04075 IPR018220 Adenylosuccinate synthase, active site NJ56_04075 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04075 IPR033128 NJ56_04075 NJ56_04080 IPR019201 Protein of unknown function DUF2065 NJ56_04085 IPR001107 Band 7 protein NJ56_04085 IPR010200 HflC NJ56_04085 IPR036013 NJ56_04085 NJ56_04090 IPR001107 Band 7 protein NJ56_04090 IPR001972 Stomatin family NJ56_04090 IPR010201 HflK NJ56_04090 IPR020980 Menbrane protein HflK, N-terminal NJ56_04090 IPR036013 NJ56_04090 NJ56_04095 IPR006073 GTP binding domain NJ56_04095 IPR016496 GTPase HflX NJ56_04095 IPR025121 GTPase HflX N-terminal domain NJ56_04095 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04095 IPR032305 NJ56_04095 NJ56_04095 IPR035647 NJ56_04095 NJ56_04100 IPR005001 Host factor Hfq NJ56_04100 IPR010920 Like-Sm (LSM) domain NJ56_04105 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase NJ56_04105 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04110 IPR002099 DNA mismatch repair protein family NJ56_04110 IPR013507 DNA mismatch repair protein, C-terminal NJ56_04110 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_04110 IPR014762 DNA mismatch repair, conserved site NJ56_04110 IPR014790 MutL, C-terminal, dimerisation NJ56_04110 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_04110 IPR020667 DNA mismatch repair protein, MutL NJ56_04110 IPR036890 NJ56_04110 NJ56_04110 IPR037198 NJ56_04110 NJ56_04115 IPR002508 Cell wall hydrolase/autolysin, catalytic NJ56_04115 IPR018392 LysM domain NJ56_04115 IPR021731 AMIN domain NJ56_04115 IPR036779 NJ56_04115 NJ56_04120 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE NJ56_04120 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04125 IPR000631 YjeF C-terminal domain NJ56_04125 IPR004443 YjeF N-terminal domain NJ56_04125 IPR029056 Ribokinase-like NJ56_04125 IPR030677 NJ56_04125 NJ56_04125 IPR036652 NJ56_04125 NJ56_04130 IPR004453 Epoxyqueuosine reductase QueG NJ56_04130 IPR009051 Alpha-helical ferredoxin NJ56_04130 IPR013542 Domain of unknown function DUF1730 NJ56_04130 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_04150 IPR012337 Ribonuclease H-like domain NJ56_04150 IPR013520 Exonuclease, RNase T/DNA polymerase III NJ56_04150 IPR022894 Oligoribonuclease NJ56_04150 IPR036397 NJ56_04150 NJ56_04155 IPR004881 Ribosome biogenesis GTPase RsgA, putative NJ56_04155 IPR010914 EngC GTPase NJ56_04155 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04160 IPR003817 Phosphatidylserine decarboxylase-related NJ56_04160 IPR033177 NJ56_04160 NJ56_04160 IPR033178 NJ56_04160 NJ56_04165 IPR006685 Mechanosensitive ion channel MscS NJ56_04165 IPR006686 Mechanosensitive ion channel MscS, conserved site NJ56_04165 IPR010920 Like-Sm (LSM) domain NJ56_04165 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 NJ56_04165 IPR011066 Mechanosensitive ion channel MscS, C-terminal NJ56_04165 IPR023408 NJ56_04165 NJ56_04165 IPR024393 Mechanosensitive ion channel MscS, porin domain NJ56_04165 IPR025692 Mechanosensitive ion channel inner membrane domain 1 NJ56_04170 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) NJ56_04170 IPR004525 Elongation factor P--(R)-beta-lysine ligase NJ56_04170 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal NJ56_04175 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site NJ56_04175 IPR003953 FAD binding domain NJ56_04175 IPR005884 Fumarate reductase, flavoprotein subunit NJ56_04175 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit NJ56_04175 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal NJ56_04175 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NJ56_04175 IPR036188 NJ56_04175 NJ56_04175 IPR037099 NJ56_04175 NJ56_04180 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein NJ56_04180 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NJ56_04180 IPR009051 Alpha-helical ferredoxin NJ56_04180 IPR012675 Beta-grasp domain NJ56_04180 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_04180 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_04180 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal NJ56_04180 IPR036010 NJ56_04180 NJ56_04185 IPR003510 Fumarate reductase, subunit C NJ56_04185 IPR034804 NJ56_04185 NJ56_04190 IPR003418 Fumarate reductase, D subunit NJ56_04190 IPR034804 NJ56_04190 NJ56_04195 IPR000566 Lipocalin/cytosolic fatty-acid binding domain NJ56_04195 IPR002446 Lipocalin, bacterial NJ56_04195 IPR012674 Calycin NJ56_04195 IPR022271 Lipocalin, ApoD type NJ56_04195 IPR022272 Lipocalin family conserved site NJ56_04200 IPR000390 Small multidrug resistance protein family NJ56_04205 IPR000259 Fimbrial-type adhesion domain NJ56_04205 IPR008966 Adhesion domain NJ56_04205 IPR036937 NJ56_04205 NJ56_04210 IPR000015 Outer membrane usher protein NJ56_04210 IPR018030 Fimbrial membrane usher, conserved site NJ56_04210 IPR025885 PapC, N-terminal domain NJ56_04210 IPR025949 PapC-like, C-terminal domain NJ56_04210 IPR037224 NJ56_04210 NJ56_04215 IPR001829 Pili assembly chaperone, bacterial NJ56_04215 IPR008962 PapD-like NJ56_04215 IPR013783 Immunoglobulin-like fold NJ56_04215 IPR016147 PapD, N-terminal, bacterial NJ56_04215 IPR016148 Pili assembly chaperone, C-terminal domain NJ56_04215 IPR018046 Pili assembly chaperone, conserved site NJ56_04215 IPR036316 NJ56_04215 NJ56_04220 IPR000259 Fimbrial-type adhesion domain NJ56_04220 IPR008966 Adhesion domain NJ56_04220 IPR036937 NJ56_04220 NJ56_04225 IPR000792 Transcription regulator LuxR, C-terminal NJ56_04225 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_04230 IPR004302 Chitin-binding, domain 3 NJ56_04230 IPR014756 Immunoglobulin E-set NJ56_04235 IPR001059 Translation elongation factor P/YeiP, central NJ56_04235 IPR008991 Translation protein SH3-like domain NJ56_04235 IPR011768 Translation elongation factor P NJ56_04235 IPR012340 Nucleic acid-binding, OB-fold NJ56_04235 IPR013185 Translation elongation factor, KOW-like NJ56_04235 IPR013852 Translation elongation factor P/YeiP, conserved site NJ56_04235 IPR014722 Ribosomal protein L2 domain 2 NJ56_04235 IPR015365 Elongation factor P, C-terminal NJ56_04235 IPR020599 Translation elongation factor P/YeiP NJ56_04240 IPR003739 Lysine-2,3-aminomutase family NJ56_04240 IPR007197 Radical SAM NJ56_04240 IPR013785 Aldolase-type TIM barrel NJ56_04240 IPR022462 Lysine-2,3-aminomutase-like NJ56_04245 IPR025294 Protein of unknown function DUF4156 NJ56_04250 IPR001844 Chaperonin Cpn60 NJ56_04250 IPR002423 Chaperonin Cpn60/TCP-1 NJ56_04250 IPR018370 Chaperonin Cpn60, conserved site NJ56_04250 IPR027409 GroEL-like apical domain NJ56_04250 IPR027410 TCP-1-like chaperonin intermediate domain NJ56_04250 IPR027413 GroEL-like equatorial domain NJ56_04255 IPR011032 GroES (chaperonin 10)-like NJ56_04255 IPR018369 Chaperonin Cpn10, conserved site NJ56_04255 IPR020818 Chaperonin Cpn10 NJ56_04255 IPR037124 NJ56_04255 NJ56_04260 IPR007313 FxsA cytoplasmic membrane protein NJ56_04265 IPR000362 Fumarate lyase family NJ56_04265 IPR004708 Aspartate ammonia-lyase NJ56_04265 IPR008948 L-Aspartase-like NJ56_04265 IPR018951 Fumarase C, C-terminal NJ56_04265 IPR020557 Fumarate lyase, conserved site NJ56_04265 IPR022761 Fumarate lyase, N-terminal NJ56_04265 IPR024083 Fumarase/histidase, N-terminal NJ56_04270 IPR004668 Anaerobic c4-dicarboxylate membrane transporter NJ56_04275 IPR004323 Divalent ion tolerance protein, CutA NJ56_04275 IPR011322 Nitrogen regulatory PII-like, alpha/beta NJ56_04275 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NJ56_04275 IPR023700 Divalent cation tolerance protein CutA, bacteria NJ56_04280 IPR003834 Cytochrome c assembly protein, transmembrane domain NJ56_04280 IPR022910 Thiol:disulphide interchange protein DsbD NJ56_04280 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NJ56_04280 IPR036249 NJ56_04280 NJ56_04280 IPR036929 NJ56_04280 NJ56_04285 IPR009057 Homeodomain-like NJ56_04285 IPR036271 NJ56_04285 NJ56_04295 IPR002104 Integrase, catalytic NJ56_04295 IPR010998 Integrase, Lambda-type, N-terminal NJ56_04295 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_04295 IPR013762 Integrase-like, catalytic core NJ56_04300 IPR011093 Domain of unknown function DUF1528, C-terminal NJ56_04300 IPR011119 Uncharacterised domain, helicase/relaxase, putative NJ56_04300 IPR022391 Integrating conjugative element relaxase, PFGI-1 class NJ56_04300 IPR036388 NJ56_04300 NJ56_04300 IPR036390 NJ56_04300 NJ56_04305 IPR003776 YcaO-like domain NJ56_04310 IPR012924 TfuA-like, core NJ56_04315 IPR026337 HEXXH motif domain NJ56_04320 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 NJ56_04320 IPR012675 Beta-grasp domain NJ56_04320 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NJ56_04325 IPR000594 UBA/THIF-type NAD/FAD binding fold NJ56_04325 IPR001763 Rhodanese-like domain NJ56_04325 IPR035985 NJ56_04325 NJ56_04325 IPR036873 NJ56_04325 NJ56_04330 IPR011701 Major facilitator superfamily NJ56_04330 IPR036259 NJ56_04330 NJ56_04335 IPR003347 JmjC domain NJ56_04345 IPR006197 Peptidase S24, LexA-like NJ56_04345 IPR015927 Peptidase S24/S26A/S26B/S26C NJ56_04345 IPR036286 NJ56_04345 NJ56_04360 IPR006118 Recombinase, conserved site NJ56_04360 IPR006119 Resolvase, N-terminal NJ56_04360 IPR036162 NJ56_04360 NJ56_04375 IPR009610 Protein of unknown function DUF1219 NJ56_04380 IPR013610 Domain of unknown function DUF1738 NJ56_04380 IPR017113 Antirestriction, ArdC NJ56_04400 IPR004914 Antirestriction protein NJ56_04415 IPR010998 Integrase, Lambda-type, N-terminal NJ56_04415 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_04415 IPR013762 Integrase-like, catalytic core NJ56_04415 IPR024456 Integrase catalytic domain, putative NJ56_04415 IPR024457 Putative integrase, N-terminal NJ56_04420 IPR019720 Plasmid stability protein, StbB NJ56_04420 IPR038307 NJ56_04420 NJ56_04425 IPR009440 Plasmid segregation protein ParM/StbA NJ56_04435 IPR012931 TraG-like, N-terminal NJ56_04445 IPR021204 Integrating conjugative element protein, PFL4711 NJ56_04450 IPR009649 TraU NJ56_04450 IPR026331 Integrating conjugative element protein PFL_4710 NJ56_04455 IPR011090 Integrating conjugative element protein, PFL4709 NJ56_04460 IPR000209 Peptidase S8/S53 domain NJ56_04460 IPR036852 NJ56_04460 NJ56_04465 IPR003593 AAA+ ATPase domain NJ56_04465 IPR003959 ATPase, AAA-type, core NJ56_04465 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04475 IPR022303 Conjugative transfer ATPase NJ56_04475 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase NJ56_04475 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04480 IPR022262 Lipoprotein, putative NJ56_04485 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI NJ56_04485 IPR021207 Integrating conjugative element protein, PFL4705 NJ56_04490 IPR021844 Integrating conjugative element protein, PFL4704 NJ56_04495 IPR021548 Protein of unknown function DUF2895 NJ56_04500 IPR021877 Protein of unknown function DUF3487 NJ56_04505 IPR021356 Integrating conjugative element protein PFL4702 NJ56_04510 IPR021676 Protein of unknown function DUF3262 NJ56_04515 IPR019110 Uncharacterised protein family, RAQPRD NJ56_04530 IPR022266 Integrating conjugative element protein, PFL4697-type NJ56_04540 IPR022458 Conjugative coupling factor TraG/TraD NJ56_04540 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 NJ56_04540 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04540 IPR032689 NJ56_04540 NJ56_04545 IPR007560 Restriction endonuclease type IV, Mrr NJ56_04545 IPR011335 Restriction endonuclease type II-like NJ56_04550 IPR021300 Integrating conjugative element protein, PFL4695 NJ56_04555 IPR008258 Lytic transglycosylase-like SLT domain NJ56_04555 IPR023346 Lysozyme-like domain NJ56_04560 IPR022293 Integrating conjugative element protein, PFL4693 NJ56_04570 IPR022260 Integrating conjugative element protein PilL, PFGI-1 NJ56_04575 IPR021960 Protein of unknown function DUF3577 NJ56_04580 IPR003601 DNA topoisomerase, type IA, domain 2 NJ56_04580 IPR003602 DNA topoisomerase, type IA, DNA-binding domain NJ56_04580 IPR005738 DNA topoisomerase III NJ56_04580 IPR006171 Toprim domain NJ56_04580 IPR013497 DNA topoisomerase, type IA, central NJ56_04580 IPR013498 DNA topoisomerase, type IA, zn finger NJ56_04580 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NJ56_04580 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 NJ56_04580 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 NJ56_04580 IPR023405 DNA topoisomerase, type IA, core domain NJ56_04580 IPR023406 DNA topoisomerase, type IA, active site NJ56_04590 IPR014996 Integrating conjugative element protein, PFL4669 NJ56_04600 IPR021364 Protein of unknown function DUF2857 NJ56_04605 IPR016868 Bacteriophage B3, Orf5 NJ56_04605 IPR024498 Domain of unknown function DUF2786 NJ56_04610 IPR003115 ParB/Sulfiredoxin NJ56_04610 IPR022304 Integrating conjugative element, PFGI-1, ParB NJ56_04610 IPR036086 NJ56_04610 NJ56_04615 IPR007692 DNA helicase, DnaB type NJ56_04615 IPR007693 DNA helicase, DnaB-like, N-terminal NJ56_04615 IPR007694 DNA helicase, DnaB-like, C-terminal NJ56_04615 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NJ56_04615 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04615 IPR036185 NJ56_04615 NJ56_04625 IPR025669 AAA domain NJ56_04625 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04630 IPR001991 Sodium:dicarboxylate symporter NJ56_04630 IPR018107 Sodium:dicarboxylate symporter, conserved site NJ56_04630 IPR034703 NJ56_04630 NJ56_04630 IPR036458 NJ56_04630 NJ56_04635 IPR000873 AMP-dependent synthetase/ligase NJ56_04635 IPR011904 Acetate-CoA ligase NJ56_04635 IPR020845 AMP-binding, conserved site NJ56_04635 IPR025110 AMP-binding enzyme C-terminal domain NJ56_04635 IPR032387 NJ56_04635 NJ56_04640 IPR007436 Protein of unknown function DUF485 NJ56_04645 IPR001734 Sodium/solute symporter NJ56_04645 IPR014083 Cation/acetate symporter ActP NJ56_04645 IPR018212 Sodium/solute symporter, conserved site NJ56_04645 IPR038377 NJ56_04645 NJ56_04675 IPR002695 AICARFT/IMPCHase bienzyme NJ56_04675 IPR011607 Methylglyoxal synthase-like domain NJ56_04675 IPR016193 Cytidine deaminase-like NJ56_04675 IPR024051 AICAR transformylase domain NJ56_04675 IPR036914 NJ56_04675 NJ56_04680 IPR000115 Phosphoribosylglycinamide synthetase NJ56_04680 IPR011054 Rudiment single hybrid motif NJ56_04680 IPR013815 ATP-grasp fold, subdomain 1 NJ56_04680 IPR016185 Pre-ATP-grasp domain NJ56_04680 IPR020559 Phosphoribosylglycinamide synthetase, conserved site NJ56_04680 IPR020560 Phosphoribosylglycinamide synthetase, C-domain NJ56_04680 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NJ56_04680 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal NJ56_04680 IPR037123 NJ56_04680 NJ56_04685 IPR010858 Protein of unknown function DUF1481 NJ56_04690 IPR000119 Histone-like bacterial DNA-binding protein NJ56_04690 IPR010992 Integration host factor (IHF)-like DNA-binding domain NJ56_04690 IPR020816 Histone-like DNA-binding protein, conserved site NJ56_04695 IPR007338 Protein of unknown function DUF416 NJ56_04695 IPR023381 YP001051499.1-like domain NJ56_04700 IPR007581 Endonuclease V NJ56_04705 IPR000257 Uroporphyrinogen decarboxylase (URO-D) NJ56_04705 IPR006361 Uroporphyrinogen decarboxylase HemE NJ56_04705 IPR038071 NJ56_04705 NJ56_04710 IPR000086 NUDIX hydrolase domain NJ56_04710 IPR015376 Zinc ribbon, NADH pyrophosphatase NJ56_04710 IPR015797 NUDIX hydrolase domain-like NJ56_04710 IPR020084 NUDIX hydrolase, conserved site NJ56_04710 IPR022925 NADH pyrophosphatase NudC NJ56_04715 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NJ56_04715 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd NJ56_04715 IPR038309 NJ56_04715 NJ56_04720 IPR002817 Thiamine biosynthesis protein ThiC NJ56_04720 IPR025747 ThiC-associated domain NJ56_04720 IPR037509 NJ56_04720 NJ56_04720 IPR038521 NJ56_04720 NJ56_04725 IPR013785 Aldolase-type TIM barrel NJ56_04725 IPR022998 Thiamin phosphate synthase superfamily NJ56_04725 IPR034291 NJ56_04725 NJ56_04725 IPR036206 NJ56_04725 NJ56_04730 IPR000594 UBA/THIF-type NAD/FAD binding fold NJ56_04730 IPR035985 NJ56_04730 NJ56_04735 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 NJ56_04735 IPR010035 ThiS, thiamine-biosynthesis NJ56_04735 IPR012675 Beta-grasp domain NJ56_04735 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NJ56_04740 IPR008867 Thiazole biosynthesis NJ56_04740 IPR013785 Aldolase-type TIM barrel NJ56_04740 IPR033983 NJ56_04740 NJ56_04745 IPR007197 Radical SAM NJ56_04745 IPR010722 Biotin and thiamin synthesis-associated domain NJ56_04745 IPR012726 Thiazole biosynthesis ThiH NJ56_04745 IPR013785 Aldolase-type TIM barrel NJ56_04750 IPR000722 RNA polymerase, alpha subunit NJ56_04750 IPR006592 RNA polymerase, N-terminal NJ56_04750 IPR007066 RNA polymerase Rpb1, domain 3 NJ56_04750 IPR007080 RNA polymerase Rpb1, domain 1 NJ56_04750 IPR007081 RNA polymerase Rpb1, domain 5 NJ56_04750 IPR007083 RNA polymerase Rpb1, domain 4 NJ56_04750 IPR012754 DNA-directed RNA polymerase, subunit beta-prime NJ56_04750 IPR038120 NJ56_04750 NJ56_04755 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 NJ56_04755 IPR007121 RNA polymerase, beta subunit, conserved site NJ56_04755 IPR007641 RNA polymerase Rpb2, domain 7 NJ56_04755 IPR007642 RNA polymerase Rpb2, domain 2 NJ56_04755 IPR007644 RNA polymerase, beta subunit, protrusion NJ56_04755 IPR007645 RNA polymerase Rpb2, domain 3 NJ56_04755 IPR010243 DNA-directed RNA polymerase, beta subunit NJ56_04755 IPR014724 RNA polymerase Rpb2, OB-fold NJ56_04755 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain NJ56_04755 IPR037033 NJ56_04755 NJ56_04755 IPR037034 NJ56_04755 NJ56_04760 IPR000206 Ribosomal protein L7/L12 NJ56_04760 IPR008932 Ribosomal protein L7/L12, oligomerisation NJ56_04760 IPR013823 Ribosomal protein L7/L12, C-terminal NJ56_04760 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NJ56_04760 IPR036235 NJ56_04760 NJ56_04765 IPR001790 Ribosomal protein L10/acidic P0 NJ56_04765 IPR002363 Ribosomal protein L10, eubacterial, conserved site NJ56_04765 IPR022973 Ribosomal protein L10 NJ56_04775 IPR002143 Ribosomal protein L1 NJ56_04775 IPR005878 Ribosomal protein L1, bacterial-type NJ56_04775 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich NJ56_04775 IPR023673 Ribosomal protein L1, conserved site NJ56_04775 IPR023674 Ribosomal protein L1-like NJ56_04775 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein NJ56_04780 IPR000911 Ribosomal protein L11/L12 NJ56_04780 IPR006519 Ribosomal protein L11, bacterial-type NJ56_04780 IPR020783 Ribosomal protein L11, C-terminal NJ56_04780 IPR020784 Ribosomal protein L11, N-terminal NJ56_04780 IPR020785 Ribosomal protein L11, conserved site NJ56_04780 IPR036769 NJ56_04780 NJ56_04780 IPR036796 NJ56_04780 NJ56_04785 IPR001062 Transcription antitermination protein, NusG NJ56_04785 IPR005824 KOW NJ56_04785 IPR006645 NusG, N-terminal NJ56_04785 IPR008991 Translation protein SH3-like domain NJ56_04785 IPR014722 Ribosomal protein L2 domain 2 NJ56_04785 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site NJ56_04785 IPR036735 NJ56_04785 NJ56_04790 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit NJ56_04790 IPR005807 SecE subunit of protein translocation complex NJ56_04790 IPR038379 NJ56_04790 NJ56_04795 IPR000795 Elongation factor, GTP-binding domain NJ56_04795 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal NJ56_04795 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 NJ56_04795 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle NJ56_04795 IPR005225 Small GTP-binding protein domain NJ56_04795 IPR009000 Translation protein, beta-barrel domain NJ56_04795 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NJ56_04795 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04795 IPR031157 NJ56_04795 NJ56_04820 IPR004566 Bacterial pantothenate kinase NJ56_04820 IPR006083 Phosphoribulokinase/uridine kinase NJ56_04820 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_04825 IPR003142 Biotin protein ligase, C-terminal NJ56_04825 IPR004143 Biotin/lipoate A/B protein ligase NJ56_04825 IPR004408 Biotin--acetyl-CoA-carboxylase ligase NJ56_04825 IPR004409 Biotin operon repressor, helix-turn-helix domain NJ56_04825 IPR008988 Transcriptional repressor, C-terminal NJ56_04825 IPR013196 Helix-turn-helix, type 11 NJ56_04825 IPR030855 NJ56_04825 NJ56_04825 IPR036388 NJ56_04825 NJ56_04825 IPR036390 NJ56_04825 NJ56_04830 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase NJ56_04830 IPR006094 FAD linked oxidase, N-terminal NJ56_04830 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal NJ56_04830 IPR016167 FAD-binding, type 2, subdomain 1 NJ56_04830 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 NJ56_04830 IPR036318 NJ56_04830 NJ56_04830 IPR036635 NJ56_04830 NJ56_04855 IPR026816 Flavodoxin domain NJ56_04855 IPR029039 Flavoprotein-like NJ56_04860 IPR003445 Cation transporter NJ56_04860 IPR004772 Potassium uptake protein TrkH family NJ56_04865 IPR001498 Impact, N-terminal NJ56_04865 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal NJ56_04865 IPR015796 Impact family, bacterial/archaeal NJ56_04865 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_04865 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site NJ56_04865 IPR035647 NJ56_04865 NJ56_04865 IPR036956 NJ56_04865 NJ56_04870 IPR000994 Peptidase M24, structural domain NJ56_04870 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site NJ56_04870 IPR022846 Xaa-Pro dipeptidase NJ56_04870 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal NJ56_04870 IPR036005 NJ56_04870 NJ56_04875 IPR001753 Crotonase superfamily NJ56_04875 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NJ56_04875 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NJ56_04875 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site NJ56_04875 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_04875 IPR012799 Fatty oxidation complex, alpha subunit FadB NJ56_04875 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NJ56_04875 IPR029045 ClpP/crotonase-like domain NJ56_04875 IPR036291 NJ56_04875 NJ56_04880 IPR002155 Thiolase NJ56_04880 IPR012805 Acetyl-CoA C-acyltransferase FadA NJ56_04880 IPR016039 Thiolase-like NJ56_04880 IPR020610 Thiolase, active site NJ56_04880 IPR020613 Thiolase, conserved site NJ56_04880 IPR020615 Thiolase, acyl-enzyme intermediate active site NJ56_04880 IPR020616 Thiolase, N-terminal NJ56_04880 IPR020617 Thiolase, C-terminal NJ56_04885 IPR001221 Phenol hydroxylase reductase NJ56_04885 IPR001433 Oxidoreductase FAD/NAD(P)-binding NJ56_04885 IPR008333 Oxidoreductase, FAD-binding domain NJ56_04885 IPR017938 Riboflavin synthase-like beta-barrel NJ56_04885 IPR039261 NJ56_04885 NJ56_04890 IPR002830 UbiD decarboxylyase family NJ56_04890 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NJ56_04895 IPR011614 Catalase core domain NJ56_04895 IPR020835 Catalase-like domain NJ56_04895 IPR024168 Catalase, SrpA-type, predicted NJ56_04900 IPR006645 NusG, N-terminal NJ56_04900 IPR010215 Transcription antitermination protein RfaH NJ56_04900 IPR036735 NJ56_04900 NJ56_04905 IPR001731 Porphobilinogen synthase NJ56_04905 IPR013785 Aldolase-type TIM barrel NJ56_04905 IPR030656 NJ56_04905 NJ56_04910 IPR001130 TatD family NJ56_04910 IPR018228 Deoxyribonuclease, TatD-related, conserved site NJ56_04910 IPR024918 Tat-linked quality control protein TatD NJ56_04910 IPR032466 NJ56_04910 NJ56_04915 IPR002033 Sec-independent periplasmic protein translocase TatC NJ56_04915 IPR019820 Sec-independent periplasmic protein translocase, conserved site NJ56_04920 IPR018448 Twin-arginine translocation protein TatB NJ56_04925 IPR003369 Sec-independent protein translocase protein TatA/B/E NJ56_04925 IPR006312 Sec-independent protein translocase protein TatA/E NJ56_04930 IPR004147 UbiB domain NJ56_04930 IPR010232 Probable protein kinase UbiB NJ56_04930 IPR011009 Protein kinase-like domain NJ56_04935 IPR003033 SCP2 sterol-binding domain NJ56_04935 IPR036527 NJ56_04935 NJ56_04940 IPR004033 UbiE/COQ5 methyltransferase NJ56_04940 IPR023576 UbiE/COQ5 methyltransferase, conserved site NJ56_04940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_04945 IPR003798 DNA recombination RmuC NJ56_04950 IPR032816 NJ56_04950 NJ56_04955 IPR003706 Carbon starvation protein CstA NJ56_04955 IPR025299 CstA C-terminal domain NJ56_04960 IPR026893 Tyrosine/serine-protein phosphatase IphP-type NJ56_04960 IPR029021 Protein-tyrosine phosphatase-like NJ56_04965 IPR000845 Nucleoside phosphorylase domain NJ56_04965 IPR010058 Uridine phosphorylase NJ56_04965 IPR018016 Nucleoside phosphorylase, conserved site NJ56_04965 IPR035994 NJ56_04965 NJ56_04970 IPR002925 Dienelactone hydrolase NJ56_04970 IPR029058 Alpha/Beta hydrolase fold NJ56_04975 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal NJ56_04975 IPR006276 Cobalamin-independent methionine synthase NJ56_04975 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal NJ56_04975 IPR038071 NJ56_04975 NJ56_04980 IPR000847 Transcription regulator HTH, LysR NJ56_04980 IPR005119 LysR, substrate-binding NJ56_04980 IPR036388 NJ56_04980 NJ56_04980 IPR036390 NJ56_04980 NJ56_04985 IPR000620 Drug/metabolite transporter NJ56_04985 IPR004779 Carboxylate/Amino Acid/Amine Transporter NJ56_04995 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain NJ56_04995 IPR030395 NJ56_04995 NJ56_05000 IPR003439 ABC transporter-like NJ56_05000 IPR003593 AAA+ ATPase domain NJ56_05000 IPR008995 Molybdate/tungstate binding, C-terminal NJ56_05000 IPR013611 Transport-associated OB, type 2 NJ56_05000 IPR017871 ABC transporter, conserved site NJ56_05000 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05005 IPR000515 MetI-like domain NJ56_05005 IPR035906 NJ56_05005 NJ56_05010 IPR000515 MetI-like domain NJ56_05010 IPR035906 NJ56_05010 NJ56_05015 IPR006059 Bacterial extracellular solute-binding, family 1 NJ56_05015 IPR006061 Bacterial extracellular solute-binding family 1, conserved site NJ56_05020 IPR007540 Fimbrial major subunit, CS1-type NJ56_05025 IPR032636 NJ56_05025 NJ56_05030 IPR008962 PapD-like NJ56_05030 IPR013783 Immunoglobulin-like fold NJ56_05035 IPR013783 Immunoglobulin-like fold NJ56_05050 IPR003439 ABC transporter-like NJ56_05050 IPR003593 AAA+ ATPase domain NJ56_05050 IPR017871 ABC transporter, conserved site NJ56_05050 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05050 IPR030660 NJ56_05050 NJ56_05055 IPR003439 ABC transporter-like NJ56_05055 IPR003593 AAA+ ATPase domain NJ56_05055 IPR017871 ABC transporter, conserved site NJ56_05055 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05055 IPR032823 NJ56_05055 NJ56_05060 IPR001851 ABC transporter, permease NJ56_05060 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal NJ56_05065 IPR001851 ABC transporter, permease NJ56_05070 IPR000709 Leu/Ile/Val-binding protein NJ56_05070 IPR028081 Leucine-binding protein domain NJ56_05070 IPR028082 Periplasmic binding protein-like I NJ56_05075 IPR000182 GNAT domain NJ56_05075 IPR016181 Acyl-CoA N-acyltransferase NJ56_05075 IPR032900 NJ56_05075 NJ56_05080 IPR004381 Glycerate kinase NJ56_05080 IPR018193 Glycerate kinase, flavodoxin-like domain NJ56_05080 IPR018197 Glycerate kinase, restriction-enzyme-like fold NJ56_05080 IPR036129 NJ56_05080 NJ56_05085 IPR003474 Gluconate transporter NJ56_05090 IPR008599 Putative sugar diacid recognition NJ56_05090 IPR025736 PucR C-terminal helix-turn-helix domain NJ56_05095 IPR000943 RNA polymerase sigma-70 NJ56_05095 IPR007627 RNA polymerase sigma-70 region 2 NJ56_05095 IPR007630 RNA polymerase sigma-70 region 4 NJ56_05095 IPR009042 RNA polymerase sigma-70 region 1.2 NJ56_05095 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria NJ56_05095 IPR013324 RNA polymerase sigma factor, region 3/4 NJ56_05095 IPR013325 RNA polymerase sigma factor, region 2 NJ56_05095 IPR014284 RNA polymerase sigma-70 like domain NJ56_05095 IPR036388 NJ56_05095 NJ56_05100 IPR003838 Permease FtsX-like NJ56_05100 IPR004513 ABC transporter, cell division protein FtsX NJ56_05105 IPR003439 ABC transporter-like NJ56_05105 IPR003593 AAA+ ATPase domain NJ56_05105 IPR005286 Cell division protein FtsE, ATP-binding NJ56_05105 IPR017871 ABC transporter, conserved site NJ56_05105 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05110 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain NJ56_05110 IPR003593 AAA+ ATPase domain NJ56_05110 IPR004390 Signal-recognition particle receptor FtsY NJ56_05110 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle NJ56_05110 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05110 IPR036225 NJ56_05110 NJ56_05115 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_05115 IPR004398 RNA methyltransferase, RsmD NJ56_05115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_05120 IPR009525 Protein of unknown function DUF1145 NJ56_05125 IPR019635 Protein of unknown function DUF2500 NJ56_05130 IPR014949 Protein of unknown function DUF1820 NJ56_05135 IPR012506 YhhN-like NJ56_05140 IPR001757 Cation-transporting P-type ATPase NJ56_05140 IPR006121 Heavy metal-associated domain, HMA NJ56_05140 IPR008250 P-type ATPase, A domain NJ56_05140 IPR017969 Heavy-metal-associated, conserved site NJ56_05140 IPR018303 P-type ATPase, phosphorylation site NJ56_05140 IPR023214 HAD-like domain NJ56_05140 IPR023298 P-type ATPase, transmembrane domain NJ56_05140 IPR023299 P-type ATPase, cytoplasmic domain N NJ56_05140 IPR027256 Cation-transporting P-type ATPase, subfamily IB NJ56_05140 IPR036163 NJ56_05140 NJ56_05140 IPR036412 NJ56_05140 NJ56_05145 IPR001455 TusA-like domain NJ56_05145 IPR022931 Sulphurtransferase TusA NJ56_05145 IPR036868 NJ56_05145 NJ56_05150 IPR003744 Protein of unknown function DUF165 NJ56_05155 IPR014894 Protein DcrB NJ56_05155 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich NJ56_05160 IPR004017 Cysteine-rich domain NJ56_05160 IPR009051 Alpha-helical ferredoxin NJ56_05160 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit NJ56_05160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_05160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_05165 IPR003953 FAD binding domain NJ56_05165 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit NJ56_05165 IPR036188 NJ56_05165 NJ56_05170 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase NJ56_05170 IPR006076 FAD dependent oxidoreductase NJ56_05170 IPR007419 BFD-like [2Fe-2S]-binding domain NJ56_05170 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit NJ56_05170 IPR036188 NJ56_05170 NJ56_05180 IPR000849 Sugar phosphate transporter NJ56_05180 IPR005267 Glycerol-3-phosphate transporter NJ56_05180 IPR011701 Major facilitator superfamily NJ56_05180 IPR021159 Glycerate/sugar phosphate transporter, conserved site NJ56_05180 IPR036259 NJ56_05180 NJ56_05185 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain NJ56_05185 IPR030395 NJ56_05185 NJ56_05190 IPR000150 Cof protein NJ56_05190 IPR006379 HAD-superfamily hydrolase, subfamily IIB NJ56_05190 IPR023214 HAD-like domain NJ56_05190 IPR036412 NJ56_05190 NJ56_05195 IPR022742 Putative lysophospholipase NJ56_05195 IPR029058 Alpha/Beta hydrolase fold NJ56_05200 IPR001123 Lysine-type exporter protein (LYSE/YGGA) NJ56_05200 IPR004778 Homoserine/Threonine efflux protein NJ56_05205 IPR001650 Helicase, C-terminal NJ56_05205 IPR002121 HRDC domain NJ56_05205 IPR004589 DNA helicase, ATP-dependent, RecQ type NJ56_05205 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial NJ56_05205 IPR010997 HRDC-like NJ56_05205 IPR011545 DEAD/DEAH box helicase domain NJ56_05205 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_05205 IPR018982 RQC domain NJ56_05205 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05205 IPR032284 NJ56_05205 NJ56_05205 IPR036388 NJ56_05205 NJ56_05210 IPR003187 Phospholipase A1 NJ56_05210 IPR036541 NJ56_05210 NJ56_05215 IPR003736 Phenylacetic acid degradation-related domain NJ56_05215 IPR006683 Thioesterase superfamily NJ56_05215 IPR029069 HotDog domain NJ56_05220 IPR000620 Drug/metabolite transporter NJ56_05220 IPR004626 RarD protein NJ56_05225 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB NJ56_05225 IPR004488 Magnesium/cobalt transport protein CorA NJ56_05230 IPR011051 RmlC-like cupin domain NJ56_05230 IPR014710 RmlC-like jelly roll fold NJ56_05230 IPR027565 Cupin fold metalloprotein, WbuC family NJ56_05235 IPR009215 TIM-barrel domain, IGPS-like NJ56_05235 IPR013785 Aldolase-type TIM barrel NJ56_05235 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain NJ56_05240 IPR008322 Uncharacterised protein family UPF0261 NJ56_05245 IPR001647 DNA-binding HTH domain, TetR-type NJ56_05245 IPR009057 Homeodomain-like NJ56_05250 IPR005753 DNA helicase, ATP-dependent, UvrD type NJ56_05250 IPR013986 DExx box DNA helicase domain NJ56_05250 IPR014017 DNA helicase, UvrD-like, C-terminal NJ56_05250 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05250 IPR034739 NJ56_05250 NJ56_05255 IPR006439 HAD hydrolase, subfamily IA NJ56_05255 IPR023214 HAD-like domain NJ56_05255 IPR036412 NJ56_05255 NJ56_05260 IPR002104 Integrase, catalytic NJ56_05260 IPR004107 Integrase, SAM-like, N-terminal NJ56_05260 IPR010998 Integrase, Lambda-type, N-terminal NJ56_05260 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_05260 IPR011931 Tyrosine recombinase XerC NJ56_05260 IPR013762 Integrase-like, catalytic core NJ56_05260 IPR023009 Tyrosine recombinase XerC/XerD NJ56_05265 IPR007435 Protein of unknown function DUF484 NJ56_05265 IPR029016 GAF domain-like NJ56_05270 IPR001653 Diaminopimelate epimerase, DapF NJ56_05270 IPR018510 Diaminopimelate epimerase, active site NJ56_05275 IPR032831 NJ56_05275 NJ56_05280 IPR002908 Frataxin/CyaY NJ56_05280 IPR020895 Frataxin conserved site NJ56_05280 IPR036524 NJ56_05280 NJ56_05285 IPR000274 Adenylate cyclase, class-I NJ56_05285 IPR024685 Adenylate cyclase class-I, N-terminal domain NJ56_05285 IPR024686 Adenylate cyclase class-I, conserved site NJ56_05290 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase NJ56_05290 IPR022417 Porphobilinogen deaminase, N-terminal NJ56_05290 IPR022418 Porphobilinogen deaminase, C-terminal NJ56_05290 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site NJ56_05290 IPR036803 NJ56_05290 NJ56_05295 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase NJ56_05295 IPR036108 NJ56_05295 NJ56_05300 IPR007470 HemX NJ56_05305 IPR005254 Heme biosynthesis-associated TPR protein NJ56_05305 IPR010817 HemY, N-terminal NJ56_05305 IPR011990 Tetratricopeptide-like helical domain NJ56_05335 IPR002293 Amino acid/polyamine transporter I NJ56_05335 IPR004840 Amino acid permease, conserved site NJ56_05335 IPR004841 Amino acid permease/ SLC12A domain NJ56_05340 IPR004629 Glycosyl transferase WecB/TagA/CpsF NJ56_05340 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase NJ56_05345 IPR010691 Uncharacterised protein family WzyE NJ56_05350 IPR009993 4-alpha-L-fucosyltransferase NJ56_05355 IPR002797 Polysaccharide biosynthesis protein NJ56_05355 IPR032896 NJ56_05355 NJ56_05360 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NJ56_05360 IPR012749 TDP-4-keto-6-deoxy-D-glucose transaminase NJ56_05360 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_05360 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_05360 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_05360 IPR032894 NJ56_05360 NJ56_05365 IPR000182 GNAT domain NJ56_05365 IPR012752 TDP-D-fucosamine acetyltransferase WecD NJ56_05365 IPR016181 Acyl-CoA N-acyltransferase NJ56_05370 IPR005835 Nucleotidyl transferase NJ56_05370 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form NJ56_05370 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_05375 IPR005888 dTDP-glucose 4,6-dehydratase NJ56_05375 IPR016040 NAD(P)-binding domain NJ56_05375 IPR036291 NJ56_05375 NJ56_05380 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal NJ56_05380 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_05380 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation NJ56_05380 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal NJ56_05380 IPR017476 UDP-glucose/GDP-mannose dehydrogenase NJ56_05380 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase NJ56_05380 IPR032891 NJ56_05380 NJ56_05380 IPR036220 NJ56_05380 NJ56_05380 IPR036291 NJ56_05380 NJ56_05385 IPR003331 UDP-N-acetylglucosamine 2-epimerase NJ56_05385 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type NJ56_05385 IPR032892 NJ56_05385 NJ56_05390 IPR003856 Lipopolysaccharide biosynthesis NJ56_05390 IPR032895 NJ56_05390 NJ56_05395 IPR000715 Glycosyl transferase, family 4 NJ56_05395 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase NJ56_05400 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NJ56_05400 IPR003593 AAA+ ATPase domain NJ56_05400 IPR004665 Transcription termination factor Rho NJ56_05400 IPR011112 Rho termination factor, N-terminal NJ56_05400 IPR011113 Rho termination factor, RNA-binding NJ56_05400 IPR011129 Cold shock protein NJ56_05400 IPR012340 Nucleic acid-binding, OB-fold NJ56_05400 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05400 IPR036269 NJ56_05400 NJ56_05405 IPR005746 Thioredoxin NJ56_05405 IPR013766 Thioredoxin domain NJ56_05405 IPR017937 Thioredoxin, conserved site NJ56_05405 IPR036249 NJ56_05405 NJ56_05410 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site NJ56_05410 IPR001650 Helicase, C-terminal NJ56_05410 IPR011545 DEAD/DEAH box helicase domain NJ56_05410 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_05410 IPR023554 RNA helicase, ATP-dependent, RhlB-type NJ56_05410 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05415 IPR003695 Ppx/GppA phosphatase NJ56_05415 IPR022371 Exopolyphosphatase NJ56_05415 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase NJ56_05415 IPR030673 NJ56_05415 NJ56_05420 IPR005752 DNA helicase, ATP-dependent, RepA type NJ56_05420 IPR013986 DExx box DNA helicase domain NJ56_05420 IPR014017 DNA helicase, UvrD-like, C-terminal NJ56_05420 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05420 IPR034739 NJ56_05420 NJ56_05430 IPR000506 Acetohydroxy acid isomeroreductase C-terminal NJ56_05430 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_05430 IPR013023 Acetohydroxy acid isomeroreductase NJ56_05430 IPR013116 Acetohydroxy acid isomeroreductase, catalytic NJ56_05430 IPR013328 Dehydrogenase, multihelical NJ56_05430 IPR036291 NJ56_05430 NJ56_05435 IPR000847 Transcription regulator HTH, LysR NJ56_05435 IPR005119 LysR, substrate-binding NJ56_05435 IPR036388 NJ56_05435 NJ56_05435 IPR036390 NJ56_05435 NJ56_05440 IPR003610 Carbohydrate-binding module family 5/12 NJ56_05440 IPR031161 NJ56_05440 NJ56_05440 IPR036573 NJ56_05440 NJ56_05445 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NJ56_05445 IPR001721 ACT-like domain NJ56_05445 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NJ56_05445 IPR005787 Threonine dehydratase, biosynthetic NJ56_05445 IPR036052 NJ56_05445 NJ56_05445 IPR038110 NJ56_05445 NJ56_05450 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase NJ56_05450 IPR004404 Dihydroxy-acid dehydratase NJ56_05450 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site NJ56_05450 IPR037237 NJ56_05450 NJ56_05460 IPR001544 Aminotransferase, class IV NJ56_05460 IPR005785 Branched-chain amino acid aminotransferase I NJ56_05460 IPR018300 Aminotransferase, class IV, conserved site NJ56_05460 IPR036038 NJ56_05460 NJ56_05470 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NJ56_05470 IPR012000 Thiamine pyrophosphate enzyme, central domain NJ56_05470 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain NJ56_05470 IPR012846 Acetolactate synthase, large subunit, biosynthetic NJ56_05470 IPR029035 DHS-like NAD/FAD-binding domain NJ56_05470 IPR029061 Thiamin diphosphate-binding fold NJ56_05475 IPR012567 IlvGEDA operon leader peptide NJ56_05480 IPR000523 Magnesium chelatase, ChlI subunit NJ56_05480 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase NJ56_05480 IPR003593 AAA+ ATPase domain NJ56_05480 IPR004482 Mg chelatase-related protein NJ56_05480 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_05480 IPR025158 Mg chelatase-related protein, C-terminal domain NJ56_05480 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05485 IPR007335 Protein of unknown function DUF413 NJ56_05490 IPR000847 Transcription regulator HTH, LysR NJ56_05490 IPR005119 LysR, substrate-binding NJ56_05490 IPR020890 Transcription regulator HTH, HdfR NJ56_05490 IPR036388 NJ56_05490 NJ56_05490 IPR036390 NJ56_05490 NJ56_05535 IPR001920 Asp/Glu racemase NJ56_05535 IPR004391 Glutamate racemase NJ56_05535 IPR015942 Asp/Glu/hydantoin racemase NJ56_05535 IPR018187 Asp/Glu racemase, active site NJ56_05535 IPR033134 NJ56_05535 NJ56_05545 IPR010280 (Uracil-5)-methyltransferase family NJ56_05545 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA NJ56_05545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_05545 IPR030390 NJ56_05545 NJ56_05545 IPR030391 NJ56_05545 NJ56_05550 IPR009867 Protein of unknown function DUF1422 NJ56_05555 IPR001647 DNA-binding HTH domain, TetR-type NJ56_05555 IPR009057 Homeodomain-like NJ56_05555 IPR023764 Transcriptional repressor HTH, FabR NJ56_05560 IPR001100 NJ56_05560 NJ56_05560 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NJ56_05560 IPR016156 FAD/NAD-linked reductase, dimerisation domain NJ56_05560 IPR022962 Soluble pyridine nucleotide transhydrogenase NJ56_05560 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain NJ56_05560 IPR036188 NJ56_05560 NJ56_05565 IPR000847 Transcription regulator HTH, LysR NJ56_05565 IPR005119 LysR, substrate-binding NJ56_05565 IPR036388 NJ56_05565 NJ56_05565 IPR036390 NJ56_05565 NJ56_05570 IPR002109 Glutaredoxin NJ56_05570 IPR011767 Glutaredoxin active site NJ56_05570 IPR011906 Glutaredoxin domain NJ56_05570 IPR013740 Redoxin NJ56_05570 IPR014025 Glutaredoxin subgroup NJ56_05570 IPR036249 NJ56_05570 NJ56_05575 IPR001100 NJ56_05575 NJ56_05575 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NJ56_05575 IPR016156 FAD/NAD-linked reductase, dimerisation domain NJ56_05575 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain NJ56_05575 IPR036188 NJ56_05575 NJ56_05575 IPR036324 NJ56_05575 NJ56_05585 IPR008651 Uncharacterised protein family HicB NJ56_05585 IPR010985 Ribbon-helix-helix NJ56_05585 IPR035069 NJ56_05585 NJ56_05590 IPR006260 TonB, C-terminal NJ56_05590 IPR037682 NJ56_05590 NJ56_05595 IPR003997 RTX secretion protein D, Gram-negative bacteria NJ56_05595 IPR006144 Secretion protein HlyD, conserved site NJ56_05595 IPR010129 Type I secretion membrane fusion protein, HlyD NJ56_05595 IPR039562 NJ56_05595 NJ56_05600 IPR003439 ABC transporter-like NJ56_05600 IPR003593 AAA+ ATPase domain NJ56_05600 IPR010128 ATPase, type I secretion system, PrtD NJ56_05600 IPR011527 ABC transporter type 1, transmembrane domain NJ56_05600 IPR017871 ABC transporter, conserved site NJ56_05600 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05600 IPR036640 NJ56_05600 NJ56_05605 IPR010495 Haem-binding HasA NJ56_05605 IPR036912 NJ56_05605 NJ56_05610 IPR000531 TonB-dependent receptor, beta-barrel NJ56_05610 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor NJ56_05610 IPR011276 TonB-dependent haem/haemoglobin receptor NJ56_05610 IPR012910 TonB-dependent receptor, plug NJ56_05610 IPR036942 NJ56_05610 NJ56_05610 IPR037066 NJ56_05610 NJ56_05615 IPR000362 Fumarate lyase family NJ56_05615 IPR008948 L-Aspartase-like NJ56_05615 IPR009049 Argininosuccinate lyase NJ56_05615 IPR020557 Fumarate lyase, conserved site NJ56_05615 IPR022761 Fumarate lyase, N-terminal NJ56_05615 IPR024083 Fumarase/histidase, N-terminal NJ56_05615 IPR029419 Argininosuccinate lyase, C-terminal NJ56_05620 IPR001518 Argininosuccinate synthase NJ56_05620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_05620 IPR018223 Argininosuccinate synthase, conserved site NJ56_05620 IPR023434 Argininosuccinate synthase, type 1 subfamily NJ56_05620 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body NJ56_05625 IPR001048 Aspartate/glutamate/uridylate kinase NJ56_05625 IPR004662 Acetylglutamate kinase NJ56_05625 IPR036393 NJ56_05625 NJ56_05625 IPR037528 NJ56_05625 NJ56_05630 IPR000534 Semialdehyde dehydrogenase, NAD-binding NJ56_05630 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 NJ56_05630 IPR012280 Semialdehyde dehydrogenase, dimerisation domain NJ56_05630 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site NJ56_05630 IPR036291 NJ56_05630 NJ56_05635 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site NJ56_05635 IPR002933 Peptidase M20 NJ56_05635 IPR010169 Acetylornithine deacetylase (ArgE) NJ56_05635 IPR011650 Peptidase M20, dimerisation domain NJ56_05635 IPR036264 NJ56_05635 NJ56_05640 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain NJ56_05640 IPR018129 Phosphoenolpyruvate carboxylase, active site NJ56_05640 IPR021135 Phosphoenolpyruvate carboxylase NJ56_05640 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type NJ56_05640 IPR033129 NJ56_05640 NJ56_05650 IPR003171 Methylenetetrahydrofolate reductase NJ56_05650 IPR004620 5,10-methylenetetrahydrofolate reductase NJ56_05650 IPR029041 FAD-linked oxidoreductase-like NJ56_05655 IPR011009 Protein kinase-like domain NJ56_05665 IPR011009 Protein kinase-like domain NJ56_05670 IPR001048 Aspartate/glutamate/uridylate kinase NJ56_05670 IPR001341 Aspartate kinase domain NJ56_05670 IPR001342 Homoserine dehydrogenase, catalytic NJ56_05670 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding NJ56_05670 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I NJ56_05670 IPR018042 Aspartate kinase, conserved site NJ56_05670 IPR019811 Homoserine dehydrogenase, conserved site NJ56_05670 IPR036291 NJ56_05670 NJ56_05670 IPR036393 NJ56_05670 NJ56_05675 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme NJ56_05675 IPR011821 O-succinylhomoserine (thiol)-lyase NJ56_05675 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_05675 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_05675 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_05680 IPR002084 Methionine repressor MetJ NJ56_05680 IPR010985 Ribbon-helix-helix NJ56_05680 IPR023453 Methionine repressor MetJ domain NJ56_05685 IPR002150 Ribosomal protein L31 NJ56_05685 IPR027491 Ribosomal protein L31 type A NJ56_05685 IPR034704 NJ56_05685 NJ56_05690 IPR001650 Helicase, C-terminal NJ56_05690 IPR005259 Primosomal protein n NJ56_05690 IPR011545 DEAD/DEAH box helicase domain NJ56_05690 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_05690 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05695 IPR000843 Transcription regulator HTH, LacI NJ56_05695 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_05695 IPR028082 Periplasmic binding protein-like I NJ56_05700 IPR007730 Sporulation-related domain NJ56_05700 IPR011930 Cell division protein FtsN NJ56_05700 IPR036680 NJ56_05700 NJ56_05705 IPR001353 Proteasome, subunit alpha/beta NJ56_05705 IPR022281 ATP-dependent protease, HslV subunit NJ56_05705 IPR029055 Nucleophile aminohydrolases, N-terminal NJ56_05710 IPR003593 AAA+ ATPase domain NJ56_05710 IPR003959 ATPase, AAA-type, core NJ56_05710 IPR004491 Heat shock protein HslU NJ56_05710 IPR019489 Clp ATPase, C-terminal NJ56_05710 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05715 IPR000537 UbiA prenyltransferase family NJ56_05715 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase NJ56_05715 IPR026046 UbiA prenyltransferase domain containing protein 1 NJ56_05720 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase NJ56_05720 IPR010203 Regulator of ribonuclease activity A NJ56_05720 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria NJ56_05720 IPR036704 NJ56_05720 NJ56_05725 IPR009252 Cell division protein ZapB NJ56_05735 IPR000425 Major intrinsic protein NJ56_05735 IPR022357 Major intrinsic protein, conserved site NJ56_05735 IPR023271 Aquaporin-like NJ56_05740 IPR000577 NJ56_05740 NJ56_05740 IPR005999 Glycerol kinase NJ56_05740 IPR018483 Carbohydrate kinase, FGGY, conserved site NJ56_05740 IPR018484 Carbohydrate kinase, FGGY, N-terminal NJ56_05740 IPR018485 Carbohydrate kinase, FGGY, C-terminal NJ56_05745 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase NJ56_05750 IPR011701 Major facilitator superfamily NJ56_05750 IPR036259 NJ56_05750 NJ56_05755 IPR001433 Oxidoreductase FAD/NAD(P)-binding NJ56_05755 IPR008333 Oxidoreductase, FAD-binding domain NJ56_05755 IPR017938 Riboflavin synthase-like beta-barrel NJ56_05755 IPR039261 NJ56_05755 NJ56_05760 IPR008523 Lactobacillus phage LBR48, DUF805 NJ56_05765 IPR009918 Protein of unknown function DUF1454 NJ56_05770 IPR000652 Triosephosphate isomerase NJ56_05770 IPR013785 Aldolase-type TIM barrel NJ56_05770 IPR020861 Triosephosphate isomerase, active site NJ56_05770 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic NJ56_05770 IPR035990 NJ56_05770 NJ56_05775 IPR005669 Thiosulphate/Sulfate-binding protein NJ56_05775 IPR034408 NJ56_05775 NJ56_05780 IPR000023 Phosphofructokinase domain NJ56_05780 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type NJ56_05780 IPR012828 6-phosphofructokinase NJ56_05780 IPR015912 Phosphofructokinase, conserved site NJ56_05780 IPR022953 Phosphofructokinase NJ56_05780 IPR035966 NJ56_05780 NJ56_05785 IPR002524 Cation efflux protein NJ56_05785 IPR023783 Cation efflux pump FieF NJ56_05785 IPR027469 Cation efflux protein transmembrane domain NJ56_05785 IPR027470 Cation efflux protein cytoplasmic domain NJ56_05785 IPR036837 NJ56_05785 NJ56_05790 IPR012899 LTXXQ motif family protein NJ56_05795 IPR001789 Signal transduction response regulator, receiver domain NJ56_05795 IPR001867 Signal transduction response regulator, C-terminal NJ56_05795 IPR011006 CheY-like superfamily NJ56_05795 IPR036388 NJ56_05795 NJ56_05800 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_05800 IPR003660 HAMP linker domain NJ56_05800 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_05800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_05800 IPR032404 NJ56_05800 NJ56_05800 IPR036097 NJ56_05800 NJ56_05800 IPR036890 NJ56_05800 NJ56_05800 IPR038515 NJ56_05800 NJ56_05805 IPR001537 tRNA/rRNA methyltransferase, SpoU type NJ56_05805 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase NJ56_05805 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NJ56_05805 IPR029028 Alpha/beta knot methyltransferases NJ56_05810 IPR001451 Bacterial transferase hexapeptide repeat NJ56_05810 IPR005881 Serine O-acetyltransferase NJ56_05810 IPR010493 Serine acetyltransferase, N-terminal NJ56_05810 IPR011004 Trimeric LpxA-like NJ56_05810 IPR018357 Hexapeptide transferase, conserved site NJ56_05815 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal NJ56_05815 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent NJ56_05815 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_05815 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal NJ56_05815 IPR013328 Dehydrogenase, multihelical NJ56_05815 IPR036291 NJ56_05815 NJ56_05820 IPR003708 Bacterial protein export chaperone SecB NJ56_05820 IPR035958 NJ56_05820 NJ56_05825 IPR002109 Glutaredoxin NJ56_05825 IPR011767 Glutaredoxin active site NJ56_05825 IPR011900 Glutaredoxin, GrxC NJ56_05825 IPR014025 Glutaredoxin subgroup NJ56_05825 IPR036249 NJ56_05825 NJ56_05830 IPR001763 Rhodanese-like domain NJ56_05830 IPR036873 NJ56_05830 NJ56_05835 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent NJ56_05835 IPR006124 Metalloenzyme NJ56_05835 IPR011258 BPG-independent PGAM, N-terminal NJ56_05835 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha NJ56_05835 IPR017850 Alkaline-phosphatase-like, core domain NJ56_05835 IPR036646 NJ56_05835 NJ56_05840 IPR011055 Duplicated hybrid motif NJ56_05840 IPR016047 Peptidase M23 NJ56_05845 IPR006837 Protein of unknown function DUF610, YibQ NJ56_05845 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NJ56_05850 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NJ56_05850 IPR004627 L-threonine 3-dehydrogenase NJ56_05850 IPR011032 GroES (chaperonin 10)-like NJ56_05850 IPR013149 Alcohol dehydrogenase, C-terminal NJ56_05850 IPR013154 Alcohol dehydrogenase GroES-like NJ56_05850 IPR020843 Polyketide synthase, enoylreductase NJ56_05850 IPR036291 NJ56_05850 NJ56_05855 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site NJ56_05855 IPR004839 Aminotransferase, class I/classII NJ56_05855 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase NJ56_05855 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_05855 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_05855 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_05860 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain NJ56_05860 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase NJ56_05860 IPR036291 NJ56_05860 NJ56_05865 IPR002201 Glycosyl transferase, family 9 NJ56_05865 IPR011910 Lipopolysaccharide heptosyltransferase II NJ56_05870 IPR002201 Glycosyl transferase, family 9 NJ56_05870 IPR011908 Lipopolysaccharide heptosyltransferase I NJ56_05875 IPR001296 Glycosyl transferase, family 1 NJ56_05875 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal NJ56_05875 IPR038107 NJ56_05875 NJ56_05880 IPR001173 Glycosyltransferase 2-like NJ56_05880 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_05885 IPR001980 Coenzyme A biosynthesis protein NJ56_05885 IPR004821 Cytidyltransferase-like domain NJ56_05885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_05890 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase NJ56_05890 IPR010979 Ribosomal protein S13-like, H2TH NJ56_05890 IPR012319 DNA glycosylase/AP lyase, catalytic domain NJ56_05890 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding NJ56_05890 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site NJ56_05890 IPR020629 Formamidopyrimidine-DNA glycosylase NJ56_05890 IPR035937 NJ56_05890 NJ56_05895 IPR001705 Ribosomal protein L33 NJ56_05895 IPR011332 Zinc-binding ribosomal protein NJ56_05895 IPR018264 Ribosomal protein L33, conserved site NJ56_05895 IPR038584 NJ56_05895 NJ56_05900 IPR001383 Ribosomal protein L28 NJ56_05900 IPR026569 Ribosomal protein L28/L24 NJ56_05900 IPR034704 NJ56_05900 NJ56_05900 IPR037147 NJ56_05900 NJ56_05910 IPR001405 RadC protein NJ56_05910 IPR010994 RuvA domain 2-like NJ56_05910 IPR020891 Uncharacterised protein family UPF0758, conserved site NJ56_05910 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily NJ56_05910 IPR025657 RadC-like JAB domain NJ56_05915 IPR003382 Flavoprotein NJ56_05915 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC NJ56_05915 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal NJ56_05915 IPR035929 NJ56_05915 NJ56_05915 IPR036551 NJ56_05915 NJ56_05920 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase NJ56_05920 IPR029054 dUTPase-like NJ56_05920 IPR036157 NJ56_05920 NJ56_05925 IPR001647 DNA-binding HTH domain, TetR-type NJ56_05925 IPR009057 Homeodomain-like NJ56_05925 IPR023769 Nucleoid occlusion factor SlmA NJ56_05925 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NJ56_05925 IPR036271 NJ56_05925 NJ56_05930 IPR000836 Phosphoribosyltransferase domain NJ56_05930 IPR004467 Orotate phosphoribosyl transferase domain NJ56_05930 IPR023031 Orotate phosphoribosyltransferase NJ56_05930 IPR029057 Phosphoribosyltransferase-like NJ56_05935 IPR001247 Exoribonuclease, phosphorolytic domain 1 NJ56_05935 IPR002381 Ribonuclease phosphorolytic, bacterial-type NJ56_05935 IPR015847 Exoribonuclease, phosphorolytic domain 2 NJ56_05935 IPR018336 Ribonuclease PH, conserved site NJ56_05935 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_05935 IPR027408 PNPase/RNase PH domain NJ56_05935 IPR036345 NJ56_05935 NJ56_05940 IPR005229 Conserved hypothetical protein CHP00255 NJ56_05940 IPR013527 YicC-like, N-terminal NJ56_05940 IPR013551 Domain of unknown function DUF1732 NJ56_05945 IPR004695 Voltage-dependent anion channel NJ56_05945 IPR038665 NJ56_05945 NJ56_05950 IPR000847 Transcription regulator HTH, LysR NJ56_05950 IPR005119 LysR, substrate-binding NJ56_05950 IPR036388 NJ56_05950 NJ56_05950 IPR036390 NJ56_05950 NJ56_05955 IPR000014 PAS domain NJ56_05955 IPR000160 GGDEF domain NJ56_05955 IPR001633 EAL domain NJ56_05955 IPR029787 Nucleotide cyclase NJ56_05955 IPR035919 NJ56_05955 NJ56_05955 IPR035965 NJ56_05955 NJ56_05960 IPR001753 Crotonase superfamily NJ56_05960 IPR029045 ClpP/crotonase-like domain NJ56_05965 IPR002668 Concentrative nucleoside transporter N-terminal domain NJ56_05965 IPR011657 Concentrative nucleoside transporter C-terminal domain NJ56_05970 IPR021957 Protein of unknown function DUF3574 NJ56_05980 IPR005115 Uncharacterised domain UPF0126 NJ56_05985 IPR004150 NAD-dependent DNA ligase, OB-fold NJ56_05985 IPR010994 RuvA domain 2-like NJ56_05985 IPR012340 Nucleic acid-binding, OB-fold NJ56_05985 IPR013839 NAD-dependent DNA ligase, adenylation NJ56_05985 IPR013840 NAD-dependent DNA ligase, N-terminal NJ56_05985 IPR020923 DNA ligase B NJ56_05985 IPR033136 NJ56_05985 NJ56_05990 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NJ56_05990 IPR017665 Guanylate kinase NJ56_05990 IPR020590 Guanylate kinase, conserved site NJ56_05990 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_05995 IPR003716 DNA-directed RNA polymerase, omega subunit NJ56_05995 IPR006110 RNA polymerase, subunit omega/K/RPB6 NJ56_05995 IPR012293 RNA polymerase subunit, RPB6/omega NJ56_05995 IPR036161 NJ56_05995 NJ56_06000 IPR002912 ACT domain NJ56_06000 IPR003607 HD/PDEase domain NJ56_06000 IPR004095 TGS NJ56_06000 IPR004811 RelA/SpoT family NJ56_06000 IPR007685 RelA/SpoT NJ56_06000 IPR012675 Beta-grasp domain NJ56_06000 IPR012676 TGS-like NJ56_06005 IPR001537 tRNA/rRNA methyltransferase, SpoU type NJ56_06005 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal NJ56_06005 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NJ56_06005 IPR029028 Alpha/beta knot methyltransferases NJ56_06005 IPR033671 NJ56_06005 NJ56_06010 IPR001650 Helicase, C-terminal NJ56_06010 IPR004609 ATP-dependent DNA helicase RecG NJ56_06010 IPR011545 DEAD/DEAH box helicase domain NJ56_06010 IPR012340 Nucleic acid-binding, OB-fold NJ56_06010 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_06010 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06010 IPR033454 NJ56_06010 NJ56_06015 IPR004445 Sodium/glutamate symporter NJ56_06020 IPR006042 Xanthine/uracil permease NJ56_06020 IPR006043 Xanthine/uracil/vitamin C permease NJ56_06020 IPR017588 Xanthine permease NJ56_06025 IPR007844 AsmA NJ56_06030 IPR000182 GNAT domain NJ56_06030 IPR012660 Thioesterase, putative NJ56_06030 IPR016181 Acyl-CoA N-acyltransferase NJ56_06030 IPR029069 HotDog domain NJ56_06035 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase NJ56_06035 IPR023509 D-Tyr tRNAtyr deacylase-like domain NJ56_06040 IPR017039 Virulence factor BrkB NJ56_06040 IPR023679 Uncharacterised protein family UPF0761, bacterial NJ56_06045 IPR006439 HAD hydrolase, subfamily IA NJ56_06045 IPR023198 Phosphoglycolate phosphatase, domain 2 NJ56_06045 IPR023214 HAD-like domain NJ56_06045 IPR036412 NJ56_06045 NJ56_06050 IPR000640 Translation elongation factor EFG, V domain NJ56_06050 IPR000795 Elongation factor, GTP-binding domain NJ56_06050 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 NJ56_06050 IPR005225 Small GTP-binding protein domain NJ56_06050 IPR006298 GTP-binding protein TypA NJ56_06050 IPR009000 Translation protein, beta-barrel domain NJ56_06050 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06050 IPR031157 NJ56_06050 NJ56_06050 IPR035647 NJ56_06050 NJ56_06055 IPR001637 Glutamine synthetase class-I, adenylation site NJ56_06055 IPR004809 Glutamine synthetase type I NJ56_06055 IPR008146 Glutamine synthetase, catalytic domain NJ56_06055 IPR008147 Glutamine synthetase, beta-Grasp NJ56_06055 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain NJ56_06055 IPR027302 Glutamine synthetase, N-terminal conserved site NJ56_06055 IPR027303 Glutamine synthetase, glycine-rich site NJ56_06055 IPR036651 NJ56_06055 NJ56_06065 IPR000014 PAS domain NJ56_06065 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_06065 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_06065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_06065 IPR013767 PAS fold NJ56_06065 IPR035965 NJ56_06065 NJ56_06065 IPR036097 NJ56_06065 NJ56_06065 IPR036890 NJ56_06065 NJ56_06070 IPR001789 Signal transduction response regulator, receiver domain NJ56_06070 IPR002078 RNA polymerase sigma factor 54 interaction domain NJ56_06070 IPR002197 DNA binding HTH domain, Fis-type NJ56_06070 IPR003593 AAA+ ATPase domain NJ56_06070 IPR009057 Homeodomain-like NJ56_06070 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) NJ56_06070 IPR011006 CheY-like superfamily NJ56_06070 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NJ56_06070 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NJ56_06070 IPR025944 Sigma-54 interaction domain, conserved site NJ56_06070 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06075 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN NJ56_06075 IPR006638 Elongator protein 3/MiaB/NifB NJ56_06075 IPR007197 Radical SAM NJ56_06075 IPR010723 HemN, C-terminal domain NJ56_06075 IPR023404 Radical SAM, alpha/beta horseshoe NJ56_06085 IPR007336 Der GTPase activator NJ56_06090 IPR006073 GTP binding domain NJ56_06090 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC NJ56_06090 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06095 IPR001098 DNA-directed DNA polymerase, family A, palm domain NJ56_06095 IPR002298 DNA polymerase A NJ56_06095 IPR002421 5'-3' exonuclease, N-terminal NJ56_06095 IPR002562 3'-5' exonuclease domain NJ56_06095 IPR008918 Helix-hairpin-helix motif, class 2 NJ56_06095 IPR012337 Ribonuclease H-like domain NJ56_06095 IPR018320 DNA polymerase 1 NJ56_06095 IPR019760 DNA-directed DNA polymerase, family A, conserved site NJ56_06095 IPR020045 5'-3' exonuclease, C-terminal domain NJ56_06095 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal NJ56_06095 IPR029060 PIN domain-like NJ56_06095 IPR036279 NJ56_06095 NJ56_06095 IPR036397 NJ56_06095 NJ56_06100 IPR001853 DSBA-like thioredoxin domain NJ56_06100 IPR017937 Thioredoxin, conserved site NJ56_06100 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL NJ56_06100 IPR036249 NJ56_06100 NJ56_06105 IPR002575 Aminoglycoside phosphotransferase NJ56_06105 IPR011009 Protein kinase-like domain NJ56_06105 IPR032882 NJ56_06105 NJ56_06110 IPR009383 Protein of unknown function DUF1040 NJ56_06110 IPR038134 NJ56_06110 NJ56_06115 IPR013482 Molybdenum cofactor guanylyltransferase NJ56_06115 IPR025877 MobA-like NTP transferase domain NJ56_06115 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_06120 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain NJ56_06120 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06145 IPR000524 Transcription regulator HTH, GntR NJ56_06145 IPR008920 Transcription regulator FadR/GntR, C-terminal NJ56_06145 IPR011711 GntR, C-terminal NJ56_06145 IPR036388 NJ56_06145 NJ56_06145 IPR036390 NJ56_06145 NJ56_06150 IPR000843 Transcription regulator HTH, LacI NJ56_06150 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_06150 IPR028082 Periplasmic binding protein-like I NJ56_06155 IPR002139 Ribokinase NJ56_06155 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site NJ56_06155 IPR011611 Carbohydrate kinase PfkB NJ56_06155 IPR011877 Ribokinase, bacterial NJ56_06155 IPR029056 Ribokinase-like NJ56_06160 IPR025997 Periplasmic binding protein domain NJ56_06160 IPR028082 Periplasmic binding protein-like I NJ56_06165 IPR001851 ABC transporter, permease NJ56_06170 IPR003439 ABC transporter-like NJ56_06170 IPR003593 AAA+ ATPase domain NJ56_06170 IPR017871 ABC transporter, conserved site NJ56_06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06175 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU NJ56_06175 IPR023064 D-ribose pyranase NJ56_06175 IPR023750 RbsD-like domain NJ56_06180 IPR003855 K+ potassium transporter NJ56_06180 IPR023051 Potassium uptake protein, low affinity, Kup NJ56_06185 IPR003593 AAA+ ATPase domain NJ56_06185 IPR011704 ATPase, dynein-related, AAA domain NJ56_06185 IPR022547 ATPase, RavA, C-terminal NJ56_06185 IPR023671 ATPase RavA NJ56_06185 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06190 IPR002035 von Willebrand factor, type A NJ56_06190 IPR008912 Uncharacterised protein family CoxE-like NJ56_06190 IPR023481 Uncharacterised protein family ViaA NJ56_06190 IPR036465 NJ56_06190 NJ56_06200 IPR004618 Aspartate--ammonia ligase NJ56_06205 IPR000485 AsnC-type HTH domain NJ56_06205 IPR011008 Dimeric alpha-beta barrel NJ56_06205 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NJ56_06205 IPR019887 Transcription regulator AsnC-type, C-terminal NJ56_06205 IPR019888 Transcription regulator AsnC-type NJ56_06205 IPR036388 NJ56_06205 NJ56_06205 IPR036390 NJ56_06205 NJ56_06210 IPR001094 Flavodoxin NJ56_06210 IPR008254 Flavodoxin/nitric oxide synthase NJ56_06210 IPR029039 Flavoprotein-like NJ56_06220 IPR002218 Glucose-inhibited division protein A-related NJ56_06220 IPR004416 Glucose-inhibited division protein A NJ56_06220 IPR020595 Glucose-inhibited division protein A-related, conserved site NJ56_06220 IPR026904 GidA associated domain 3 NJ56_06220 IPR036188 NJ56_06220 NJ56_06225 IPR003682 rRNA small subunit methyltransferase G NJ56_06225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_06230 IPR005598 ATP synthase protein I NJ56_06235 IPR000568 ATPase, F0 complex, subunit A NJ56_06235 IPR023011 ATPase, F0 complex, subunit A, active site NJ56_06235 IPR035908 NJ56_06235 NJ56_06240 IPR000454 ATPase, F0 complex, subunit C NJ56_06240 IPR002379 V-ATPase proteolipid subunit C-like domain NJ56_06240 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast NJ56_06240 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site NJ56_06240 IPR035921 NJ56_06240 NJ56_06240 IPR038662 NJ56_06240 NJ56_06245 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast NJ56_06245 IPR005864 ATPase, F0 complex, subunit B, bacterial NJ56_06245 IPR028987 F-type ATP synthase subunit B-like, membrane domain NJ56_06250 IPR000711 ATPase, OSCP/delta subunit NJ56_06250 IPR020781 ATPase, OSCP/delta subunit, conserved site NJ56_06250 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain NJ56_06255 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NJ56_06255 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal NJ56_06255 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain NJ56_06255 IPR005294 ATPase, F1 complex, alpha subunit NJ56_06255 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site NJ56_06255 IPR023366 ATP synthase subunit alpha-like domain NJ56_06255 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06255 IPR036121 NJ56_06255 NJ56_06255 IPR038376 NJ56_06255 NJ56_06260 IPR000131 ATPase, F1 complex, gamma subunit NJ56_06260 IPR023632 ATPase, F1 complex, gamma subunit conserved site NJ56_06260 IPR035968 NJ56_06260 NJ56_06270 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NJ56_06270 IPR003593 AAA+ ATPase domain NJ56_06270 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain NJ56_06270 IPR005722 ATPase, F1 complex, beta subunit NJ56_06270 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site NJ56_06270 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal NJ56_06270 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06270 IPR036121 NJ56_06270 NJ56_06275 IPR001469 ATPase, F1 complex, delta/epsilon subunit NJ56_06275 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal NJ56_06275 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain NJ56_06275 IPR036771 NJ56_06275 NJ56_06275 IPR036794 NJ56_06275 NJ56_06280 IPR001451 Bacterial transferase hexapeptide repeat NJ56_06280 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase NJ56_06280 IPR011004 Trimeric LpxA-like NJ56_06280 IPR018357 Hexapeptide transferase, conserved site NJ56_06280 IPR025877 MobA-like NTP transferase domain NJ56_06280 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_06285 IPR001347 Sugar isomerase (SIS) NJ56_06285 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising NJ56_06285 IPR029055 Nucleophile aminohydrolases, N-terminal NJ56_06290 IPR005673 ABC transporter, phosphate-binding protein PstS NJ56_06290 IPR024370 PBP domain NJ56_06295 IPR000515 MetI-like domain NJ56_06295 IPR011864 Phosphate ABC transporter, permease protein PstC NJ56_06295 IPR035906 NJ56_06295 NJ56_06300 IPR000515 MetI-like domain NJ56_06300 IPR005672 Phosphate transport system permease protein PstA NJ56_06300 IPR035906 NJ56_06300 NJ56_06305 IPR003439 ABC transporter-like NJ56_06305 IPR003593 AAA+ ATPase domain NJ56_06305 IPR005670 Phosphate transport system permease protein 1 NJ56_06305 IPR017871 ABC transporter, conserved site NJ56_06305 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06310 IPR026022 PhoU domain NJ56_06310 IPR028366 Phosphate transport system protein PhoU NJ56_06310 IPR038078 NJ56_06310 NJ56_06315 IPR001638 Extracellular solute-binding protein, family 3 NJ56_06315 IPR018313 Extracellular solute-binding protein, family 3, conserved site NJ56_06320 IPR000515 MetI-like domain NJ56_06320 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family NJ56_06320 IPR035906 NJ56_06320 NJ56_06325 IPR000515 MetI-like domain NJ56_06325 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family NJ56_06325 IPR035906 NJ56_06325 NJ56_06330 IPR006043 Xanthine/uracil/vitamin C permease NJ56_06330 IPR026033 Purine permease PbuG-like NJ56_06335 IPR003660 HAMP linker domain NJ56_06335 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_06335 IPR033479 NJ56_06335 NJ56_06340 IPR000259 Fimbrial-type adhesion domain NJ56_06340 IPR008966 Adhesion domain NJ56_06340 IPR036937 NJ56_06340 NJ56_06345 IPR001829 Pili assembly chaperone, bacterial NJ56_06345 IPR008962 PapD-like NJ56_06345 IPR013783 Immunoglobulin-like fold NJ56_06345 IPR016147 PapD, N-terminal, bacterial NJ56_06345 IPR016148 Pili assembly chaperone, C-terminal domain NJ56_06345 IPR018046 Pili assembly chaperone, conserved site NJ56_06345 IPR036316 NJ56_06345 NJ56_06350 IPR000015 Outer membrane usher protein NJ56_06350 IPR018030 Fimbrial membrane usher, conserved site NJ56_06350 IPR025885 PapC, N-terminal domain NJ56_06350 IPR025949 PapC-like, C-terminal domain NJ56_06350 IPR037224 NJ56_06350 NJ56_06355 IPR000259 Fimbrial-type adhesion domain NJ56_06355 IPR008966 Adhesion domain NJ56_06355 IPR036937 NJ56_06355 NJ56_06360 IPR004520 tRNA modification GTPase MnmE NJ56_06360 IPR005225 Small GTP-binding protein domain NJ56_06360 IPR006073 GTP binding domain NJ56_06360 IPR018948 GTP-binding protein TrmE, N-terminal NJ56_06360 IPR025867 tRNA modification GTPase MnmE C-terminal domain NJ56_06360 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 NJ56_06360 IPR027368 tRNA modification GTPase MnmE domain 2 NJ56_06360 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06365 IPR001708 Membrane insertase OXA1/ALB3/YidC NJ56_06365 IPR019998 Membrane insertase YidC NJ56_06365 IPR028053 Membrane insertase YidC, N-terminal NJ56_06365 IPR028055 Membrane insertase YidC/Oxa1, C-terminal NJ56_06365 IPR038210 NJ56_06365 NJ56_06365 IPR038221 NJ56_06365 NJ56_06370 IPR002696 Putative membrane protein insertion efficiency factor NJ56_06375 IPR000100 Ribonuclease P NJ56_06375 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_06375 IPR020539 Ribonuclease P, conserved site NJ56_06375 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_06380 IPR000271 Ribosomal protein L34 NJ56_06380 IPR020939 Ribosomal protein L34, conserved site NJ56_06390 IPR001957 Chromosomal replication control, initiator DnaA NJ56_06390 IPR003593 AAA+ ATPase domain NJ56_06390 IPR010921 Trp repressor/replication initiator NJ56_06390 IPR013159 Chromosomal replication initiator, DnaA C-terminal NJ56_06390 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) NJ56_06390 IPR018312 Chromosomal replication control, initiator DnaA, conserved site NJ56_06390 IPR020591 Chromosomal replication control, initiator DnaA-like NJ56_06390 IPR024633 DnaA N-terminal domain NJ56_06390 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06390 IPR038454 NJ56_06390 NJ56_06395 IPR001001 DNA polymerase III, beta chain NJ56_06395 IPR022634 DNA polymerase III, beta chain, N-terminal NJ56_06395 IPR022635 DNA polymerase III, beta chain, C-terminal NJ56_06395 IPR022637 DNA polymerase III, beta chain, central NJ56_06400 IPR001238 DNA-binding, RecF NJ56_06400 IPR003395 RecF/RecN/SMC, N-terminal NJ56_06400 IPR018078 DNA-binding, RecF, conserved site NJ56_06400 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06405 IPR000565 DNA topoisomerase, type IIA, subunit B NJ56_06405 IPR001241 DNA topoisomerase, type IIA NJ56_06405 IPR002288 DNA gyrase B subunit, C-terminal NJ56_06405 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_06405 IPR006171 Toprim domain NJ56_06405 IPR011557 DNA gyrase, subunit B NJ56_06405 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 NJ56_06405 IPR013759 DNA topoisomerase, type IIA, central domain NJ56_06405 IPR013760 DNA topoisomerase, type IIA-like domain NJ56_06405 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_06405 IPR018522 DNA topoisomerase, type IIA, conserved site NJ56_06405 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_06405 IPR036890 NJ56_06405 NJ56_06410 IPR000150 Cof protein NJ56_06410 IPR006379 HAD-superfamily hydrolase, subfamily IIB NJ56_06410 IPR023214 HAD-like domain NJ56_06410 IPR036412 NJ56_06410 NJ56_06415 IPR002469 Peptidase S9B, dipeptidylpeptidase IV N-terminal NJ56_06415 IPR011042 Six-bladed beta-propeller, TolB-like NJ56_06415 IPR022223 Protein of unknown function DUF3748 NJ56_06420 IPR010780 Protein of unknown function DUF1375 NJ56_06425 IPR002068 Alpha crystallin/Hsp20 domain NJ56_06425 IPR008978 HSP20-like chaperone NJ56_06425 IPR023728 Small heat shock protein IbpA NJ56_06430 IPR002068 Alpha crystallin/Hsp20 domain NJ56_06430 IPR008978 HSP20-like chaperone NJ56_06430 IPR022848 Small heat shock protein IbpB NJ56_06435 IPR006037 Regulator of K+ conductance, C-terminal NJ56_06435 IPR006512 YidE/YbjL duplication NJ56_06435 IPR023018 Transport protein YidE, putative NJ56_06435 IPR036721 NJ56_06435 NJ56_06440 IPR004839 Aminotransferase, class I/classII NJ56_06440 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_06440 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_06445 IPR006664 Outer membrane protein, bacterial NJ56_06445 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal NJ56_06445 IPR036737 NJ56_06445 NJ56_06445 IPR039567 NJ56_06445 NJ56_06455 IPR001064 Beta/gamma crystallin NJ56_06455 IPR011024 Gamma-crystallin-related NJ56_06455 IPR016181 Acyl-CoA N-acyltransferase NJ56_06460 IPR000182 GNAT domain NJ56_06460 IPR016181 Acyl-CoA N-acyltransferase NJ56_06465 IPR004597 DNA-3-methyladenine glycosylase I NJ56_06465 IPR005019 Methyladenine glycosylase NJ56_06465 IPR011257 DNA glycosylase NJ56_06475 IPR002310 Glycine-tRNA ligase, alpha subunit NJ56_06480 IPR008909 DALR anticodon binding NJ56_06480 IPR015944 Glycine-tRNA ligase, beta subunit NJ56_06485 IPR021413 Protein of unknown function DUF3053 NJ56_06490 IPR007893 Spore coat protein U NJ56_06495 IPR000015 Outer membrane usher protein NJ56_06495 IPR025949 PapC-like, C-terminal domain NJ56_06500 IPR008962 PapD-like NJ56_06500 IPR013783 Immunoglobulin-like fold NJ56_06500 IPR016147 PapD, N-terminal, bacterial NJ56_06505 IPR007893 Spore coat protein U NJ56_06510 IPR007893 Spore coat protein U NJ56_06515 IPR002178 PTS EIIA type-2 domain NJ56_06515 IPR003352 Phosphotransferase system, EIIC NJ56_06515 IPR003501 Phosphotransferase system, EIIB component, type 2/3 NJ56_06515 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC NJ56_06515 IPR016152 Phosphotransferase/anion transporter NJ56_06515 IPR036095 NJ56_06515 NJ56_06520 IPR000669 Mannitol dehydrogenase NJ56_06520 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_06520 IPR013118 Mannitol dehydrogenase, C-terminal NJ56_06520 IPR013131 Mannitol dehydrogenase, N-terminal NJ56_06520 IPR013328 Dehydrogenase, multihelical NJ56_06520 IPR023027 Mannitol dehydrogenase, conserved site NJ56_06520 IPR023028 Mannitol-1-phosphate 5-dehydrogenase NJ56_06520 IPR036291 NJ56_06520 NJ56_06525 IPR007761 Mannitol repressor NJ56_06525 IPR038026 NJ56_06525 NJ56_06530 IPR021230 Protein of unknown function DUF2810 NJ56_06535 IPR005163 3-alpha domain NJ56_06535 IPR005302 Molybdenum cofactor sulfurase, C-terminal NJ56_06535 IPR011037 Pyruvate kinase-like, insert domain NJ56_06540 IPR003660 HAMP linker domain NJ56_06540 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_06540 IPR004090 Chemotaxis methyl-accepting receptor NJ56_06540 IPR032255 NJ56_06540 NJ56_06545 IPR001189 Manganese/iron superoxide dismutase NJ56_06545 IPR019831 Manganese/iron superoxide dismutase, N-terminal NJ56_06545 IPR019832 Manganese/iron superoxide dismutase, C-terminal NJ56_06545 IPR019833 Manganese/iron superoxide dismutase, binding site NJ56_06545 IPR036314 NJ56_06545 NJ56_06545 IPR036324 NJ56_06545 NJ56_06550 IPR003786 Protein FdhD NJ56_06550 IPR016193 Cytidine deaminase-like NJ56_06555 IPR006656 Molybdopterin oxidoreductase NJ56_06555 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain NJ56_06555 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site NJ56_06560 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic NJ56_06560 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site NJ56_06560 IPR006656 Molybdopterin oxidoreductase NJ56_06560 IPR006657 Molydopterin dinucleotide-binding domain NJ56_06560 IPR009010 Aspartate decarboxylase-like domain NJ56_06565 IPR006470 Formate dehydrogenase, beta subunit NJ56_06565 IPR014603 Formate dehydrogenase, iron-sulphur subunit NJ56_06565 IPR015246 Formate dehydrogenase, transmembrane NJ56_06565 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_06565 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_06565 IPR038384 NJ56_06565 NJ56_06570 IPR006471 Formate dehydrogenase, gamma subunit NJ56_06570 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase NJ56_06570 IPR016174 Di-haem cytochrome, transmembrane NJ56_06575 IPR006452 Formate dehydrogenase accessory protein NJ56_06575 IPR024064 FdhE-like NJ56_06580 IPR004534 L-seryl-tRNA selenium transferase NJ56_06580 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_06580 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_06580 IPR018319 L-seryl-tRNA selenium transferase-like NJ56_06580 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain NJ56_06585 IPR000795 Elongation factor, GTP-binding domain NJ56_06585 IPR004535 Translation elongation factor, selenocysteine-specific NJ56_06585 IPR009000 Translation protein, beta-barrel domain NJ56_06585 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NJ56_06585 IPR015190 Translation elongation factor SelB, winged helix, type 2 NJ56_06585 IPR015191 Translation elongation factor SelB, winged helix, type 3 NJ56_06585 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06585 IPR031157 NJ56_06585 NJ56_06585 IPR036388 NJ56_06585 NJ56_06585 IPR036390 NJ56_06585 NJ56_06590 IPR000755 Peptidase M15D, VanX D-ala-D-ala dipeptidase NJ56_06590 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NJ56_06595 IPR011701 Major facilitator superfamily NJ56_06595 IPR036259 NJ56_06595 NJ56_06600 IPR002656 Acyltransferase 3 NJ56_06600 IPR032905 NJ56_06600 NJ56_06605 IPR025166 Domain of unknown function DUF4102 NJ56_06605 IPR038488 NJ56_06605 NJ56_06615 IPR031339 NJ56_06615 NJ56_06625 IPR023636 Urocanase conserved site NJ56_06625 IPR023637 Urocanase NJ56_06625 IPR035085 NJ56_06625 NJ56_06625 IPR035400 NJ56_06625 NJ56_06625 IPR035401 NJ56_06625 NJ56_06625 IPR036190 NJ56_06625 NJ56_06625 IPR038364 NJ56_06625 NJ56_06630 IPR001106 Aromatic amino acid lyase NJ56_06630 IPR005921 Histidine ammonia-lyase NJ56_06630 IPR008948 L-Aspartase-like NJ56_06630 IPR022313 Phenylalanine/histidine ammonia-lyases, active site NJ56_06630 IPR024083 Fumarase/histidase, N-terminal NJ56_06635 IPR002293 Amino acid/polyamine transporter I NJ56_06635 IPR004840 Amino acid permease, conserved site NJ56_06635 IPR004841 Amino acid permease/ SLC12A domain NJ56_06640 IPR010406 Protein of unknown function DUF1003 NJ56_06645 IPR022742 Putative lysophospholipase NJ56_06645 IPR029058 Alpha/Beta hydrolase fold NJ56_06650 IPR000917 Sulfatase NJ56_06650 IPR012549 Domain of unknown function DUF1705 NJ56_06650 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha NJ56_06650 IPR017850 Alkaline-phosphatase-like, core domain NJ56_06655 IPR000792 Transcription regulator LuxR, C-terminal NJ56_06655 IPR001789 Signal transduction response regulator, receiver domain NJ56_06655 IPR011006 CheY-like superfamily NJ56_06655 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_06660 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_06660 IPR007895 MASE1 NJ56_06660 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain NJ56_06660 IPR036890 NJ56_06660 NJ56_06665 IPR000849 Sugar phosphate transporter NJ56_06665 IPR011701 Major facilitator superfamily NJ56_06665 IPR036259 NJ56_06665 NJ56_06675 IPR000914 Bacterial extracellular solute-binding protein, family 5 NJ56_06675 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site NJ56_06675 IPR030678 NJ56_06675 NJ56_06680 IPR000515 MetI-like domain NJ56_06680 IPR035906 NJ56_06680 NJ56_06685 IPR000515 MetI-like domain NJ56_06685 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NJ56_06685 IPR035906 NJ56_06685 NJ56_06690 IPR003439 ABC transporter-like NJ56_06690 IPR003593 AAA+ ATPase domain NJ56_06690 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NJ56_06690 IPR017871 ABC transporter, conserved site NJ56_06690 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06695 IPR003439 ABC transporter-like NJ56_06695 IPR003593 AAA+ ATPase domain NJ56_06695 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NJ56_06695 IPR017871 ABC transporter, conserved site NJ56_06695 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06700 IPR017744 Cellulose synthase operon protein YhjU NJ56_06705 IPR019995 Cellulose biosynthesis, BcsF/YhjT NJ56_06710 IPR017745 Cellulose biosynthesis protein BcsE NJ56_06715 IPR024487 Protein of unknown function DUF2629 NJ56_06720 IPR017746 Cellulose synthase operon protein YhjQ NJ56_06720 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06725 IPR001173 Glycosyltransferase 2-like NJ56_06725 IPR003919 Cellulose synthase, subunit A NJ56_06725 IPR005150 Cellulose synthase NJ56_06725 IPR009875 PilZ domain NJ56_06725 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_06730 IPR003920 Cellulose synthase, subunit B NJ56_06730 IPR008979 Galactose-binding domain-like NJ56_06730 IPR018513 Cellulose synthase BcsB, bacterial NJ56_06735 IPR002037 Glycoside hydrolase, family 8 NJ56_06735 IPR008928 Six-hairpin glycosidase-like NJ56_06735 IPR012341 Six-hairpin glycosidase NJ56_06740 IPR008410 Cellulose synthase operon C, C-terminal NJ56_06740 IPR011990 Tetratricopeptide-like helical domain NJ56_06740 IPR019734 Tetratricopeptide repeat NJ56_06745 IPR000160 GGDEF domain NJ56_06745 IPR001633 EAL domain NJ56_06745 IPR003660 HAMP linker domain NJ56_06745 IPR029787 Nucleotide cyclase NJ56_06745 IPR033419 NJ56_06745 NJ56_06745 IPR035919 NJ56_06745 NJ56_06750 IPR001991 Sodium:dicarboxylate symporter NJ56_06750 IPR018107 Sodium:dicarboxylate symporter, conserved site NJ56_06750 IPR023954 C4-dicarboxylate transport protein NJ56_06750 IPR036458 NJ56_06750 NJ56_06755 IPR007863 Peptidase M16, C-terminal domain NJ56_06755 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like NJ56_06755 IPR011765 Peptidase M16, N-terminal NJ56_06760 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site NJ56_06760 IPR011611 Carbohydrate kinase PfkB NJ56_06760 IPR029056 Ribokinase-like NJ56_06765 IPR004370 4-oxalocrotonate tautomerase NJ56_06765 IPR014347 Tautomerase/MIF superfamily NJ56_06765 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type NJ56_06770 IPR001633 EAL domain NJ56_06770 IPR035919 NJ56_06770 NJ56_06775 IPR003763 CDP-diacylglycerol pyrophosphatase NJ56_06775 IPR036265 NJ56_06775 NJ56_06775 IPR038433 NJ56_06775 NJ56_06780 IPR005274 Inner membrane protein YhjD NJ56_06780 IPR017039 Virulence factor BrkB NJ56_06785 IPR000847 Transcription regulator HTH, LysR NJ56_06785 IPR005119 LysR, substrate-binding NJ56_06785 IPR036388 NJ56_06785 NJ56_06785 IPR036390 NJ56_06785 NJ56_06790 IPR001991 Sodium:dicarboxylate symporter NJ56_06790 IPR036458 NJ56_06790 NJ56_06795 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme NJ56_06795 IPR006233 Cystathionine beta-lyase, bacterial NJ56_06795 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_06795 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_06795 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_06800 IPR001100 NJ56_06800 NJ56_06800 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NJ56_06800 IPR006322 Glutathione reductase, eukaryote/bacterial NJ56_06800 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site NJ56_06800 IPR016156 FAD/NAD-linked reductase, dimerisation domain NJ56_06800 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain NJ56_06800 IPR036188 NJ56_06800 NJ56_06805 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_06805 IPR007473 Ribosomal RNA large subunit methyltransferase J NJ56_06805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_06810 IPR001567 Peptidase M3A/M3B NJ56_06810 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NJ56_06815 IPR007536 Ribosomal RNA small subunit methyltransferase J NJ56_06815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_06820 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase NJ56_06820 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal NJ56_06820 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain NJ56_06820 IPR014362 Glutamate dehydrogenase NJ56_06820 IPR033524 NJ56_06820 NJ56_06820 IPR036291 NJ56_06820 NJ56_06825 IPR006015 Universal stress protein A NJ56_06825 IPR006016 UspA NJ56_06825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_06830 IPR019598 Universal stress protein B NJ56_06835 IPR001204 Phosphate transporter NJ56_06840 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like NJ56_06840 IPR023166 HI0933 insert-like domain NJ56_06840 IPR036188 NJ56_06840 NJ56_06845 IPR001123 Lysine-type exporter protein (LYSE/YGGA) NJ56_06850 IPR016181 Acyl-CoA N-acyltransferase NJ56_06855 IPR003829 Pirin, N-terminal domain NJ56_06855 IPR011051 RmlC-like cupin domain NJ56_06855 IPR012093 Pirin NJ56_06855 IPR014710 RmlC-like jelly roll fold NJ56_06860 IPR000843 Transcription regulator HTH, LacI NJ56_06860 IPR001761 Periplasmic binding protein/LacI sugar binding domain NJ56_06860 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_06860 IPR028082 Periplasmic binding protein-like I NJ56_06865 IPR003474 Gluconate transporter NJ56_06885 IPR006001 Carbohydrate kinase, thermoresistant glucokinase NJ56_06885 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06885 IPR031322 NJ56_06885 NJ56_06890 IPR002771 Multiple antibiotic resistance (MarC)-related NJ56_06895 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site NJ56_06895 IPR000534 Semialdehyde dehydrogenase, NAD-binding NJ56_06895 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type NJ56_06895 IPR012080 Aspartate-semialdehyde dehydrogenase NJ56_06895 IPR012280 Semialdehyde dehydrogenase, dimerisation domain NJ56_06895 IPR036291 NJ56_06895 NJ56_06900 IPR010559 Signal transduction histidine kinase, internal region NJ56_06900 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region NJ56_06900 IPR036890 NJ56_06900 NJ56_06905 IPR004193 Glycoside hydrolase, family 13, N-terminal NJ56_06905 IPR006047 Glycosyl hydrolase, family 13, catalytic domain NJ56_06905 IPR006048 Alpha-amylase, C-terminal all beta NJ56_06905 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB NJ56_06905 IPR013780 Glycosyl hydrolase, family 13, all-beta NJ56_06905 IPR013783 Immunoglobulin-like fold NJ56_06905 IPR014756 Immunoglobulin E-set NJ56_06905 IPR017853 Glycoside hydrolase, superfamily NJ56_06905 IPR037439 NJ56_06905 NJ56_06910 IPR004193 Glycoside hydrolase, family 13, N-terminal NJ56_06910 IPR006047 Glycosyl hydrolase, family 13, catalytic domain NJ56_06910 IPR011837 Glycogen debranching enzyme, GlgX type NJ56_06910 IPR013780 Glycosyl hydrolase, family 13, all-beta NJ56_06910 IPR013783 Immunoglobulin-like fold NJ56_06910 IPR014756 Immunoglobulin E-set NJ56_06910 IPR017853 Glycoside hydrolase, superfamily NJ56_06910 IPR022844 Glycogen debranching enzyme, bacterial NJ56_06915 IPR005835 Nucleotidyl transferase NJ56_06915 IPR005836 ADP-glucose pyrophosphorylase, conserved site NJ56_06915 IPR011004 Trimeric LpxA-like NJ56_06915 IPR011831 Glucose-1-phosphate adenylyltransferase NJ56_06915 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial NJ56_06915 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_06920 IPR001296 Glycosyl transferase, family 1 NJ56_06920 IPR011835 Glycogen/starch synthase, ADP-glucose type NJ56_06920 IPR013534 Starch synthase, catalytic domain NJ56_06925 IPR000811 Glycosyl transferase, family 35 NJ56_06925 IPR011833 Glycogen/starch/alpha-glucan phosphorylase NJ56_06925 IPR035090 NJ56_06925 NJ56_06930 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase NJ56_06930 IPR006076 FAD dependent oxidoreductase NJ56_06930 IPR031656 NJ56_06930 NJ56_06930 IPR036188 NJ56_06930 NJ56_06930 IPR038299 NJ56_06930 NJ56_06935 IPR001034 HTH DeoR N-terminal domain NJ56_06935 IPR014036 DeoR C-terminal sensor domain NJ56_06935 IPR018356 Transcription regulator, HTH DeoR-type, conserved site NJ56_06935 IPR036388 NJ56_06935 NJ56_06935 IPR036390 NJ56_06935 NJ56_06935 IPR037171 NJ56_06935 NJ56_06940 IPR022732 Peptidase S54, GlpG peptidase, N-terminal NJ56_06940 IPR022764 Peptidase S54, rhomboid domain NJ56_06940 IPR023662 Rhomboid protease GlpG NJ56_06940 IPR035952 NJ56_06940 NJ56_06940 IPR038236 NJ56_06940 NJ56_06945 IPR001763 Rhodanese-like domain NJ56_06945 IPR023695 Thiosulfate sulfurtransferase, bacterial NJ56_06945 IPR036873 NJ56_06945 NJ56_06950 IPR000792 Transcription regulator LuxR, C-terminal NJ56_06950 IPR011990 Tetratricopeptide-like helical domain NJ56_06950 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_06950 IPR023768 Transcriptional regulator HTH-type, MalT NJ56_06950 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06950 IPR036388 NJ56_06950 NJ56_06955 IPR000811 Glycosyl transferase, family 35 NJ56_06955 IPR011833 Glycogen/starch/alpha-glucan phosphorylase NJ56_06955 IPR035090 NJ56_06955 NJ56_06960 IPR003385 Glycoside hydrolase, family 77 NJ56_06960 IPR017853 Glycoside hydrolase, superfamily NJ56_06965 IPR000361 FeS cluster biogenesis NJ56_06965 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal NJ56_06965 IPR017726 Fe/S biogenesis protein NfuA NJ56_06965 IPR034904 NJ56_06965 NJ56_06965 IPR035903 NJ56_06965 NJ56_06970 IPR000836 Phosphoribosyltransferase domain NJ56_06970 IPR029057 Phosphoribosyltransferase-like NJ56_06975 IPR000073 Alpha/beta hydrolase fold-1 NJ56_06975 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase NJ56_06975 IPR029058 Alpha/Beta hydrolase fold NJ56_06980 IPR010854 Domain of unknown function DUF1471 NJ56_06980 IPR025543 Dodecin-like NJ56_06980 IPR036275 NJ56_06980 NJ56_06985 IPR015102 Transcriptional regulator HTH-type, FeoC NJ56_06985 IPR023732 Ferrous iron transport protein C NJ56_06985 IPR036388 NJ56_06985 NJ56_06985 IPR036390 NJ56_06985 NJ56_06990 IPR003373 Ferrous iron transport protein B NJ56_06990 IPR005225 Small GTP-binding protein domain NJ56_06990 IPR011640 Ferrous iron transport protein B, C-terminal NJ56_06990 IPR011642 Nucleoside recognition Gate NJ56_06990 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_06990 IPR030389 NJ56_06990 NJ56_06995 IPR007167 Ferrous iron transporter FeoA domain NJ56_06995 IPR008988 Transcriptional repressor, C-terminal NJ56_06995 IPR038157 NJ56_06995 NJ56_07000 IPR003029 Ribosomal protein S1, RNA-binding domain NJ56_07000 IPR006641 YqgF/RNase H-like domain NJ56_07000 IPR010994 RuvA domain 2-like NJ56_07000 IPR012337 Ribonuclease H-like domain NJ56_07000 IPR012340 Nucleic acid-binding, OB-fold NJ56_07000 IPR018974 Tex-like protein, N-terminal NJ56_07000 IPR022967 RNA-binding domain, S1 NJ56_07000 IPR023319 Tex-like protein, HTH domain NJ56_07000 IPR023323 Tex-like domain NJ56_07000 IPR032639 NJ56_07000 NJ56_07000 IPR037027 NJ56_07000 NJ56_07005 IPR011701 Major facilitator superfamily NJ56_07005 IPR036259 NJ56_07005 NJ56_07010 IPR016084 Haem oxygenase-like, multi-helical NJ56_07020 IPR016084 Haem oxygenase-like, multi-helical NJ56_07020 IPR036390 NJ56_07020 NJ56_07025 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal NJ56_07025 IPR006358 Transcription elongation factor GreB NJ56_07025 IPR018151 Transcription elongation factor, GreA/GreB, conserved site NJ56_07025 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal NJ56_07025 IPR023459 Transcription elongation factor GreA/GreB family NJ56_07025 IPR028624 Transcription elongation factor GreA/GreB NJ56_07025 IPR036805 NJ56_07025 NJ56_07025 IPR036953 NJ56_07025 NJ56_07030 IPR001789 Signal transduction response regulator, receiver domain NJ56_07030 IPR001867 Signal transduction response regulator, C-terminal NJ56_07030 IPR011006 CheY-like superfamily NJ56_07030 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_07030 IPR036388 NJ56_07030 NJ56_07035 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_07035 IPR003660 HAMP linker domain NJ56_07035 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_07035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_07035 IPR036097 NJ56_07035 NJ56_07035 IPR036890 NJ56_07035 NJ56_07040 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising NJ56_07040 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal NJ56_07040 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal NJ56_07040 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site NJ56_07045 IPR000397 Heat shock protein Hsp33 NJ56_07045 IPR016153 Heat shock protein Hsp33, N-terminal NJ56_07045 IPR016154 Heat shock protein Hsp33, C-terminal NJ56_07045 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain NJ56_07050 IPR002942 RNA-binding S4 domain NJ56_07050 IPR025708 Heat shock protein 15 NJ56_07050 IPR036986 NJ56_07050 NJ56_07055 IPR006439 HAD hydrolase, subfamily IA NJ56_07055 IPR023214 HAD-like domain NJ56_07055 IPR036412 NJ56_07055 NJ56_07060 IPR010771 Intracellular growth attenuator IgaA NJ56_07065 IPR000086 NUDIX hydrolase domain NJ56_07065 IPR015797 NUDIX hydrolase domain-like NJ56_07065 IPR020084 NUDIX hydrolase, conserved site NJ56_07070 IPR001264 Glycosyl transferase, family 51 NJ56_07070 IPR001460 Penicillin-binding protein, transpeptidase NJ56_07070 IPR012338 Beta-lactamase/transpeptidase-like NJ56_07070 IPR023346 Lysozyme-like domain NJ56_07070 IPR031376 NJ56_07070 NJ56_07070 IPR036950 NJ56_07070 NJ56_07075 IPR005883 Type IV pilus assembly protein PilM NJ56_07080 IPR007813 Fimbrial assembly PilN NJ56_07095 IPR001775 GspD/PilQ family NJ56_07095 IPR004845 Type II secretion system GspD, conserved site NJ56_07095 IPR004846 Type II/III secretion system NJ56_07095 IPR005644 NolW-like NJ56_07095 IPR011662 Secretin/TonB, short N-terminal NJ56_07095 IPR013355 Type IV pilus secretin PilQ NJ56_07095 IPR038591 NJ56_07095 NJ56_07100 IPR000623 Shikimate kinase/Threonine synthase-like 1 NJ56_07100 IPR023000 Shikimate kinase, conserved site NJ56_07100 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_07100 IPR031322 NJ56_07100 NJ56_07105 IPR016037 3-dehydroquinate synthase AroB NJ56_07105 IPR030960 NJ56_07105 NJ56_07105 IPR030963 NJ56_07105 NJ56_07110 IPR007730 Sporulation-related domain NJ56_07110 IPR032899 NJ56_07110 NJ56_07110 IPR036680 NJ56_07110 NJ56_07115 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_07115 IPR012263 Adenine modification methylase, M.EcoRV-type NJ56_07115 IPR012327 D12 class N6 adenine-specific DNA methyltransferase NJ56_07115 IPR023095 Adenine-specific methyltransferase, domain 2 NJ56_07115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_07120 IPR000056 Ribulose-phosphate 3-epimerase-like NJ56_07120 IPR011060 Ribulose-phosphate binding barrel NJ56_07120 IPR013785 Aldolase-type TIM barrel NJ56_07120 IPR026019 Ribulose-phosphate 3-epimerase NJ56_07125 IPR006346 2-phosphoglycolate phosphatase, prokaryotic NJ56_07125 IPR006439 HAD hydrolase, subfamily IA NJ56_07125 IPR023198 Phosphoglycolate phosphatase, domain 2 NJ56_07125 IPR023214 HAD-like domain NJ56_07125 IPR036412 NJ56_07125 NJ56_07125 IPR037512 NJ56_07125 NJ56_07130 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NJ56_07130 IPR002305 Aminoacyl-tRNA synthetase, class Ic NJ56_07130 IPR002306 Tryptophan-tRNA ligase NJ56_07130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_07130 IPR024109 Tryptophan-tRNA ligase, bacterial-type NJ56_07135 IPR000878 Tetrapyrrole methylase NJ56_07135 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site NJ56_07135 IPR006366 Uroporphyrin-III C-methyltransferase NJ56_07135 IPR006367 Sirohaem synthase, N-terminal NJ56_07135 IPR012409 Sirohaem synthase NJ56_07135 IPR014776 Tetrapyrrole methylase, subdomain 2 NJ56_07135 IPR014777 Tetrapyrrole methylase, subdomain 1 NJ56_07135 IPR019478 Sirohaem synthase, dimerisation domain NJ56_07135 IPR028281 Siroheme synthase, central domain NJ56_07135 IPR035996 NJ56_07135 NJ56_07135 IPR036291 NJ56_07135 NJ56_07135 IPR037115 NJ56_07135 NJ56_07140 IPR000292 Formate/nitrite transporter NJ56_07140 IPR023271 Aquaporin-like NJ56_07140 IPR024002 Formate/nitrite transporter, conserved site NJ56_07145 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD NJ56_07145 IPR036922 NJ56_07145 NJ56_07150 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain NJ56_07150 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site NJ56_07150 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain NJ56_07150 IPR007419 BFD-like [2Fe-2S]-binding domain NJ56_07150 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB NJ56_07150 IPR017121 Nitrite reductase [NAD(P)H], large subunit NJ56_07150 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain NJ56_07150 IPR036136 NJ56_07150 NJ56_07150 IPR036188 NJ56_07150 NJ56_07155 IPR011059 Metal-dependent hydrolase, composite domain NJ56_07155 IPR013108 Amidohydrolase 3 NJ56_07155 IPR032466 NJ56_07155 NJ56_07160 IPR011701 Major facilitator superfamily NJ56_07160 IPR023528 Major facilitator superfamily transporter, TsgA NJ56_07160 IPR036259 NJ56_07160 NJ56_07165 IPR021333 Protein of unknown function DUF2946 NJ56_07170 IPR000531 TonB-dependent receptor, beta-barrel NJ56_07170 IPR010100 TonB-dependent copper receptor NJ56_07170 IPR012910 TonB-dependent receptor, plug NJ56_07170 IPR036942 NJ56_07170 NJ56_07170 IPR037066 NJ56_07170 NJ56_07175 IPR000843 Transcription regulator HTH, LacI NJ56_07175 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_07175 IPR028082 Periplasmic binding protein-like I NJ56_07180 IPR001088 Glycoside hydrolase, family 4 NJ56_07180 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal NJ56_07180 IPR019802 Glycoside hydrolase, family 4, conserved site NJ56_07180 IPR022616 Glycosyl hydrolase, family 4, C-terminal NJ56_07180 IPR036291 NJ56_07180 NJ56_07185 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain NJ56_07185 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site NJ56_07185 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase NJ56_07185 IPR029000 Cyclophilin-like domain NJ56_07190 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain NJ56_07190 IPR017926 Glutamine amidotransferase NJ56_07190 IPR029062 Class I glutamine amidotransferase-like NJ56_07195 IPR004636 Acetylornithine/Succinylornithine transaminase family NJ56_07195 IPR005814 Aminotransferase class-III NJ56_07195 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_07195 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_07195 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_07195 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria NJ56_07200 IPR010020 Integral membrane protein, YccS/YhfK NJ56_07200 IPR032692 NJ56_07200 NJ56_07205 IPR000595 Cyclic nucleotide-binding domain NJ56_07205 IPR012318 Helix-turn-helix motif, Crp-type NJ56_07205 IPR014710 RmlC-like jelly roll fold NJ56_07205 IPR018335 Transcription regulator HTH, Crp-type, conserved site NJ56_07205 IPR018488 Cyclic nucleotide-binding, conserved site NJ56_07205 IPR018490 Cyclic nucleotide-binding-like NJ56_07205 IPR036388 NJ56_07205 NJ56_07205 IPR036390 NJ56_07205 NJ56_07210 IPR003718 OsmC/Ohr family NJ56_07210 IPR015946 K homology domain-like, alpha/beta NJ56_07210 IPR036102 NJ56_07210 NJ56_07225 IPR000620 Drug/metabolite transporter NJ56_07230 IPR000836 Phosphoribosyltransferase domain NJ56_07230 IPR029057 Phosphoribosyltransferase-like NJ56_07235 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NJ56_07235 IPR036052 NJ56_07235 NJ56_07240 IPR006082 Phosphoribulokinase NJ56_07240 IPR006083 Phosphoribulokinase/uridine kinase NJ56_07240 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_07245 IPR010648 Uncharacterised protein family UPF0270 NJ56_07245 IPR036685 NJ56_07245 NJ56_07250 IPR000073 Alpha/beta hydrolase fold-1 NJ56_07250 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site NJ56_07250 IPR012020 AB-hydrolase YheT, putative NJ56_07250 IPR029058 Alpha/Beta hydrolase fold NJ56_07255 IPR001123 Lysine-type exporter protein (LYSE/YGGA) NJ56_07260 IPR002201 Glycosyl transferase, family 9 NJ56_07265 IPR001173 Glycosyltransferase 2-like NJ56_07265 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_07270 IPR003439 ABC transporter-like NJ56_07270 IPR003593 AAA+ ATPase domain NJ56_07270 IPR017871 ABC transporter, conserved site NJ56_07270 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_07270 IPR032781 NJ56_07270 NJ56_07275 IPR003680 Flavodoxin-like fold NJ56_07275 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG NJ56_07275 IPR029039 Flavoprotein-like NJ56_07280 IPR003148 Regulator of K+ conductance, N-terminal NJ56_07280 IPR004771 K+/H+ exchanger NJ56_07280 IPR006153 Cation/H+ exchanger NJ56_07280 IPR020884 Glutathione-regulated potassium-efflux system protein KefB NJ56_07280 IPR036291 NJ56_07280 NJ56_07280 IPR038770 NJ56_07280 NJ56_07285 IPR012658 Conserved hypothetical protein CHP02443 NJ56_07290 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain NJ56_07295 IPR007236 SlyX NJ56_07300 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal NJ56_07300 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain NJ56_07300 IPR036944 NJ56_07300 NJ56_07305 IPR013559 YheO-like NJ56_07305 IPR039445 NJ56_07305 NJ56_07310 IPR003787 Sulphur relay, DsrE/F-like protein NJ56_07310 IPR017463 Sulphur relay, TusD/DsrE NJ56_07310 IPR027396 DsrEFH-like NJ56_07315 IPR003787 Sulphur relay, DsrE/F-like protein NJ56_07315 IPR017462 Sulphur relay, TusC/DsrF NJ56_07315 IPR027396 DsrEFH-like NJ56_07315 IPR037450 NJ56_07315 NJ56_07320 IPR007215 Sulphur relay, TusB/DsrH NJ56_07320 IPR023526 Sulphur relay, TusB NJ56_07320 IPR027396 DsrEFH-like NJ56_07325 IPR005679 Ribosomal protein S12, bacteria NJ56_07325 IPR006032 Ribosomal protein S12/S23 NJ56_07325 IPR012340 Nucleic acid-binding, OB-fold NJ56_07330 IPR000235 Ribosomal protein S5/S7 NJ56_07330 IPR005717 Ribosomal protein S7, bacterial/organellar-type NJ56_07330 IPR020606 Ribosomal protein S7, conserved site NJ56_07330 IPR023798 Ribosomal protein S7 domain NJ56_07330 IPR036823 NJ56_07330 NJ56_07335 IPR000640 Translation elongation factor EFG, V domain NJ56_07335 IPR000795 Elongation factor, GTP-binding domain NJ56_07335 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 NJ56_07335 IPR004540 Translation elongation factor EFG/EF2 NJ56_07335 IPR005225 Small GTP-binding protein domain NJ56_07335 IPR005517 Translation elongation factor EFG/EF2, domain IV NJ56_07335 IPR009000 Translation protein, beta-barrel domain NJ56_07335 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_07335 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_07335 IPR031157 NJ56_07335 NJ56_07335 IPR035647 NJ56_07335 NJ56_07345 IPR000795 Elongation factor, GTP-binding domain NJ56_07345 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal NJ56_07345 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 NJ56_07345 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle NJ56_07345 IPR005225 Small GTP-binding protein domain NJ56_07345 IPR009000 Translation protein, beta-barrel domain NJ56_07345 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NJ56_07345 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_07345 IPR031157 NJ56_07345 NJ56_07350 IPR007419 BFD-like [2Fe-2S]-binding domain NJ56_07355 IPR002024 Bacterioferritin NJ56_07355 IPR008331 Ferritin/DPS protein domain NJ56_07355 IPR009078 Ferritin-like superfamily NJ56_07355 IPR012347 Ferritin-related NJ56_07360 IPR001848 Ribosomal protein S10 NJ56_07360 IPR018268 Ribosomal protein S10, conserved site NJ56_07360 IPR027486 Ribosomal protein S10 domain NJ56_07360 IPR036838 NJ56_07360 NJ56_07365 IPR000597 Ribosomal protein L3 NJ56_07365 IPR009000 Translation protein, beta-barrel domain NJ56_07365 IPR019926 Ribosomal protein L3, conserved site NJ56_07365 IPR019927 Ribosomal protein L3, bacterial/organelle-type NJ56_07370 IPR002136 Ribosomal protein L4/L1e NJ56_07370 IPR013005 Ribosomal protein L4/L1e, bacterial-type NJ56_07370 IPR023574 Ribosomal protein L4 domain NJ56_07375 IPR001014 Ribosomal protein L23/L25, conserved site NJ56_07375 IPR012677 Nucleotide-binding, alpha-beta plait NJ56_07375 IPR012678 Ribosomal protein L23/L15e core domain NJ56_07375 IPR013025 Ribosomal protein L25/L23 NJ56_07380 IPR002171 Ribosomal protein L2 NJ56_07380 IPR005880 Ribosomal protein L2, bacterial/organellar-type NJ56_07380 IPR008991 Translation protein SH3-like domain NJ56_07380 IPR012340 Nucleic acid-binding, OB-fold NJ56_07380 IPR014722 Ribosomal protein L2 domain 2 NJ56_07380 IPR014726 Ribosomal protein L2, domain 3 NJ56_07380 IPR022666 Ribosomal Proteins L2, RNA binding domain NJ56_07380 IPR022669 Ribosomal protein L2, C-terminal NJ56_07380 IPR022671 Ribosomal protein L2, conserved site NJ56_07385 IPR002222 Ribosomal protein S19/S15 NJ56_07385 IPR005732 Ribosomal protein S19, bacterial-type NJ56_07385 IPR020934 Ribosomal protein S19 conserved site NJ56_07385 IPR023575 Ribosomal protein S19, superfamily NJ56_07390 IPR001063 Ribosomal protein L22/L17 NJ56_07390 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type NJ56_07390 IPR018260 Ribosomal protein L22/L17, conserved site NJ56_07390 IPR036394 NJ56_07390 NJ56_07395 IPR001351 Ribosomal protein S3, C-terminal NJ56_07395 IPR004044 K Homology domain, type 2 NJ56_07395 IPR004087 K Homology domain NJ56_07395 IPR005704 Ribosomal protein S3, bacterial NJ56_07395 IPR009019 K homology domain, prokaryotic type NJ56_07395 IPR015946 K homology domain-like, alpha/beta NJ56_07395 IPR018280 Ribosomal protein S3, conserved site NJ56_07395 IPR036419 NJ56_07395 NJ56_07400 IPR000114 Ribosomal protein L16 NJ56_07400 IPR016180 Ribosomal protein L10e/L16 NJ56_07400 IPR020798 Ribosomal protein L16, conserved site NJ56_07400 IPR036920 NJ56_07400 NJ56_07405 IPR001854 Ribosomal protein L29 NJ56_07405 IPR036049 NJ56_07405 NJ56_07410 IPR000266 Ribosomal protein S17 NJ56_07410 IPR012340 Nucleic acid-binding, OB-fold NJ56_07410 IPR019979 Ribosomal protein S17, conserved site NJ56_07410 IPR019984 Ribosomal protein S17, bacterial-type NJ56_07415 IPR000218 Ribosomal protein L14b/L23e NJ56_07415 IPR005745 Ribosomal protein L14, bacterial-type NJ56_07415 IPR019972 Ribosomal protein L14 conserved site NJ56_07415 IPR036853 NJ56_07415 NJ56_07420 IPR003256 Ribosomal protein L24 NJ56_07420 IPR005824 KOW NJ56_07420 IPR005825 Ribosomal protein L24/L26, conserved site NJ56_07420 IPR008991 Translation protein SH3-like domain NJ56_07420 IPR014722 Ribosomal protein L2 domain 2 NJ56_07425 IPR002132 Ribosomal protein L5 NJ56_07425 IPR020929 Ribosomal protein L5, conserved site NJ56_07425 IPR020930 Ribosomal protein L5, bacterial-type NJ56_07425 IPR022803 Ribosomal protein L5 domain NJ56_07425 IPR031309 NJ56_07425 NJ56_07425 IPR031310 NJ56_07425 NJ56_07430 IPR001209 Ribosomal protein S14 NJ56_07430 IPR018271 Ribosomal protein S14, conserved site NJ56_07430 IPR023036 Ribosomal protein S14, bacterial/plastid NJ56_07435 IPR000630 Ribosomal protein S8 NJ56_07435 IPR035987 NJ56_07435 NJ56_07440 IPR000702 Ribosomal protein L6 NJ56_07440 IPR002358 Ribosomal protein L6, conserved site NJ56_07440 IPR019906 Ribosomal protein L6, bacterial-type NJ56_07440 IPR020040 Ribosomal protein L6, alpha-beta domain NJ56_07440 IPR036789 NJ56_07440 NJ56_07445 IPR004389 Ribosomal protein L18, bacterial-type NJ56_07445 IPR005484 Ribosomal protein L18/L5 NJ56_07450 IPR005324 Ribosomal protein S5, C-terminal NJ56_07450 IPR005712 Ribosomal protein S5, bacterial-type NJ56_07450 IPR013810 Ribosomal protein S5, N-terminal NJ56_07450 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_07450 IPR018192 Ribosomal protein S5, N-terminal, conserved site NJ56_07450 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_07455 IPR005996 Ribosomal protein L30, bacterial-type NJ56_07455 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NJ56_07455 IPR018038 Ribosomal protein L30, conserved site NJ56_07455 IPR036919 NJ56_07455 NJ56_07460 IPR001196 Ribosomal protein L15, conserved site NJ56_07460 IPR005749 Ribosomal protein L15, bacterial-type NJ56_07460 IPR021131 Ribosomal protein L18e/L15P NJ56_07460 IPR030878 NJ56_07460 NJ56_07460 IPR036227 NJ56_07460 NJ56_07465 IPR002208 SecY/SEC61-alpha family NJ56_07465 IPR023201 SecY subunit domain NJ56_07465 IPR026593 Protein translocase subunit SecY NJ56_07465 IPR030659 NJ56_07465 NJ56_07470 IPR000473 Ribosomal protein L36 NJ56_07470 IPR035977 NJ56_07470 NJ56_07475 IPR001892 Ribosomal protein S13 NJ56_07475 IPR010979 Ribosomal protein S13-like, H2TH NJ56_07475 IPR018269 Ribosomal protein S13, conserved site NJ56_07475 IPR019980 Ribosomal protein S13, bacterial-type NJ56_07475 IPR027437 30s ribosomal protein S13, C-terminal NJ56_07480 IPR001971 Ribosomal protein S11 NJ56_07480 IPR018102 Ribosomal S11, conserved site NJ56_07480 IPR019981 Ribosomal protein S11, bacterial-type NJ56_07480 IPR036967 NJ56_07480 NJ56_07485 IPR001912 Ribosomal protein S4/S9, N-terminal NJ56_07485 IPR002942 RNA-binding S4 domain NJ56_07485 IPR005709 Ribosomal protein S4, bacterial-type NJ56_07485 IPR018079 Ribosomal protein S4, conserved site NJ56_07485 IPR036986 NJ56_07485 NJ56_07490 IPR011260 RNA polymerase, alpha subunit, C-terminal NJ56_07490 IPR011262 DNA-directed RNA polymerase, insert domain NJ56_07490 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type NJ56_07490 IPR011773 DNA-directed RNA polymerase, alpha subunit NJ56_07490 IPR036603 NJ56_07490 NJ56_07490 IPR036643 NJ56_07490 NJ56_07495 IPR000456 Ribosomal protein L17 NJ56_07495 IPR036373 NJ56_07495 NJ56_07500 IPR000551 MerR-type HTH domain NJ56_07500 IPR009061 DNA binding domain, putative NJ56_07500 IPR011788 Zn(II)-responsive transcriptional regulator NJ56_07505 IPR005589 Protein of unknown function DUF331 NJ56_07510 IPR001185 Large-conductance mechanosensitive channel NJ56_07510 IPR019823 Large-conductance mechanosensitive channel, conserved site NJ56_07510 IPR036019 NJ56_07510 NJ56_07510 IPR037673 NJ56_07510 NJ56_07515 IPR003148 Regulator of K+ conductance, N-terminal NJ56_07515 IPR006036 Potassium uptake protein TrkA NJ56_07515 IPR006037 Regulator of K+ conductance, C-terminal NJ56_07515 IPR036291 NJ56_07515 NJ56_07515 IPR036721 NJ56_07515 NJ56_07520 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p NJ56_07520 IPR004573 rRNA small subunit methyltransferase B NJ56_07520 IPR006027 NusB/RsmB/TIM44 NJ56_07520 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site NJ56_07520 IPR023267 RNA (C5-cytosine) methyltransferase NJ56_07520 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae NJ56_07520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_07520 IPR035926 NJ56_07520 NJ56_07525 IPR001555 Phosphoribosylglycinamide formyltransferase, active site NJ56_07525 IPR002376 Formyl transferase, N-terminal NJ56_07525 IPR005793 Formyl transferase, C-terminal NJ56_07525 IPR005794 Methionyl-tRNA formyltransferase NJ56_07525 IPR011034 Formyl transferase, C-terminal-like NJ56_07525 IPR036477 NJ56_07525 NJ56_07525 IPR037022 NJ56_07525 NJ56_07530 IPR023635 Peptide deformylase NJ56_07530 IPR036821 NJ56_07530 NJ56_07535 IPR003488 DNA recombination-mediator protein A NJ56_07540 IPR007456 Protein of unknown function DUF494 NJ56_07545 IPR013498 DNA topoisomerase, type IA, zn finger NJ56_07550 IPR006070 YrdC-like domain NJ56_07550 IPR017945 DHBP synthase RibB-like alpha/beta domain NJ56_07550 IPR023535 Threonylcarbamoyl-AMP synthase NJ56_07555 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase NJ56_07555 IPR011342 Shikimate dehydrogenase NJ56_07555 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal NJ56_07555 IPR022893 Shikimate, quinate/shikimate dehydrogenase NJ56_07555 IPR036291 NJ56_07555 NJ56_07560 IPR001451 Bacterial transferase hexapeptide repeat NJ56_07560 IPR011004 Trimeric LpxA-like NJ56_07600 IPR005697 Homoserine O-succinyltransferase NJ56_07600 IPR029062 Class I glutamine amidotransferase-like NJ56_07600 IPR033752 NJ56_07600 NJ56_07605 IPR001465 Malate synthase NJ56_07605 IPR006252 Malate synthase A NJ56_07605 IPR011076 Malate synthase-like NJ56_07610 IPR006254 Isocitrate lyase NJ56_07610 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain NJ56_07610 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site NJ56_07615 IPR010452 Isocitrate dehydrogenase kinasephosphatase NJ56_07620 IPR005471 Transcription regulator IclR, N-terminal NJ56_07620 IPR014757 Transcription regulator IclR, C-terminal NJ56_07620 IPR029016 GAF domain-like NJ56_07620 IPR036388 NJ56_07620 NJ56_07620 IPR036390 NJ56_07620 NJ56_07625 IPR000489 Pterin-binding NJ56_07625 IPR003726 Homocysteine S-methyltransferase NJ56_07625 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NJ56_07625 IPR004223 Vitamin B12-dependent methionine synthase, activation domain NJ56_07625 IPR006158 Cobalamin (vitamin B12)-binding domain NJ56_07625 IPR011005 Dihydropteroate synthase-like NJ56_07625 IPR011822 Cobalamin-dependent methionine synthase NJ56_07625 IPR036589 NJ56_07625 NJ56_07625 IPR036594 NJ56_07625 NJ56_07625 IPR036724 NJ56_07625 NJ56_07625 IPR037010 NJ56_07625 NJ56_07640 IPR000847 Transcription regulator HTH, LysR NJ56_07640 IPR036388 NJ56_07640 NJ56_07640 IPR036390 NJ56_07640 NJ56_07645 IPR005063 Transposase, IS1 NJ56_07655 IPR010667 Bacteriophage T4, Gp19, tail tube NJ56_07655 IPR011747 Conserved hypothetical protein CHP02241 NJ56_07660 IPR020287 Tail sheath protein, C-terminal domain NJ56_07660 IPR035089 NJ56_07660 NJ56_07665 IPR020287 Tail sheath protein, C-terminal domain NJ56_07665 IPR035089 NJ56_07665 NJ56_07670 IPR020287 Tail sheath protein, C-terminal domain NJ56_07675 IPR010667 Bacteriophage T4, Gp19, tail tube NJ56_07675 IPR011747 Conserved hypothetical protein CHP02241 NJ56_07690 IPR037026 NJ56_07690 NJ56_07695 IPR007048 GpW/Gp25/anti-adapter protein IraD NJ56_07725 IPR003593 AAA+ ATPase domain NJ56_07725 IPR003959 ATPase, AAA-type, core NJ56_07725 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_07730 IPR025351 Protein of unknown function DUF4255 NJ56_07735 IPR007577 Glycosyltransferase, DXD sugar-binding motif NJ56_07735 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_07745 IPR003344 Bacterial Ig-like, group 1 NJ56_07745 IPR003535 Intimin/invasin bacterial adhesion mediator protein NJ56_07745 IPR008964 Invasin/intimin cell-adhesion NJ56_07745 IPR013783 Immunoglobulin-like fold NJ56_07745 IPR022409 PKD/Chitinase domain NJ56_07745 IPR024519 Domain of unknown function DUF3442, intimin/invasin NJ56_07745 IPR038177 NJ56_07745 NJ56_07755 IPR001207 Transposase, mutator type NJ56_07760 IPR008638 Filamentous haemagglutinin, N-terminal NJ56_07760 IPR011050 Pectin lyase fold/virulence factor NJ56_07760 IPR012334 Pectin lyase fold NJ56_07760 IPR025157 Haemagluttinin repeat NJ56_07765 IPR005565 Haemolysin activator HlyB NJ56_07765 IPR013686 Polypeptide-transport-associated, ShlB-type NJ56_07765 IPR027282 Two partner secretion pathway transporter NJ56_07765 IPR035251 NJ56_07765 NJ56_07770 IPR001048 Aspartate/glutamate/uridylate kinase NJ56_07770 IPR001341 Aspartate kinase domain NJ56_07770 IPR005260 Aspartate kinase, monofunctional class NJ56_07770 IPR018042 Aspartate kinase, conserved site NJ56_07770 IPR036393 NJ56_07770 NJ56_07775 IPR001672 Phosphoglucose isomerase (PGI) NJ56_07775 IPR018189 Phosphoglucose isomerase, conserved site NJ56_07775 IPR023096 Phosphoglucose isomerase, C-terminal NJ56_07780 IPR009315 Phosphate-starvation-induced PsiE NJ56_07780 IPR020948 Phosphate-starvation-induced PsiE-like NJ56_07785 IPR000515 MetI-like domain NJ56_07785 IPR035906 NJ56_07785 NJ56_07790 IPR000515 MetI-like domain NJ56_07790 IPR029345 Maltose transport system permease protein MalF, P2 domain NJ56_07790 IPR035277 NJ56_07790 NJ56_07790 IPR035906 NJ56_07790 NJ56_07795 IPR006059 Bacterial extracellular solute-binding, family 1 NJ56_07795 IPR006060 Maltose binding protein NJ56_07795 IPR006061 Bacterial extracellular solute-binding family 1, conserved site NJ56_07805 IPR003439 ABC transporter-like NJ56_07805 IPR003593 AAA+ ATPase domain NJ56_07805 IPR008995 Molybdate/tungstate binding, C-terminal NJ56_07805 IPR013611 Transport-associated OB, type 2 NJ56_07805 IPR017871 ABC transporter, conserved site NJ56_07805 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_07810 IPR003192 Porin, LamB type NJ56_07810 IPR023738 Maltoporin NJ56_07810 IPR036998 NJ56_07810 NJ56_07815 IPR010794 Maltose operon periplasmic NJ56_07820 IPR007440 Chorismate--pyruvate lyase NJ56_07820 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NJ56_07825 IPR000537 UbiA prenyltransferase family NJ56_07825 IPR006370 4-hydroxybenzoate polyprenyl transferase NJ56_07825 IPR030470 NJ56_07825 NJ56_07830 IPR002123 Phospholipid/glycerol acyltransferase NJ56_07830 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase NJ56_07830 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB NJ56_07835 IPR000829 Diacylglycerol kinase, prokaryotic NJ56_07835 IPR036945 NJ56_07835 NJ56_07840 IPR006197 Peptidase S24, LexA-like NJ56_07840 IPR006199 LexA repressor, DNA-binding domain NJ56_07840 IPR006200 LexA repressor NJ56_07840 IPR015927 Peptidase S24/S26A/S26B/S26C NJ56_07840 IPR036286 NJ56_07840 NJ56_07840 IPR036388 NJ56_07840 NJ56_07840 IPR036390 NJ56_07840 NJ56_07845 IPR002481 Ferric-uptake regulator NJ56_07845 IPR036388 NJ56_07845 NJ56_07845 IPR036390 NJ56_07845 NJ56_07850 IPR001269 tRNA-dihydrouridine synthase NJ56_07850 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN NJ56_07850 IPR013785 Aldolase-type TIM barrel NJ56_07850 IPR018517 tRNA-dihydrouridine synthase, conserved site NJ56_07855 IPR014318 Phage shock protein, PspG NJ56_07860 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site NJ56_07860 IPR011032 GroES (chaperonin 10)-like NJ56_07860 IPR013149 Alcohol dehydrogenase, C-terminal NJ56_07860 IPR013154 Alcohol dehydrogenase GroES-like NJ56_07860 IPR020843 Polyketide synthase, enoylreductase NJ56_07860 IPR036291 NJ56_07860 NJ56_07865 IPR003593 AAA+ ATPase domain NJ56_07865 IPR007692 DNA helicase, DnaB type NJ56_07865 IPR007693 DNA helicase, DnaB-like, N-terminal NJ56_07865 IPR007694 DNA helicase, DnaB-like, C-terminal NJ56_07865 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NJ56_07865 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_07865 IPR036185 NJ56_07865 NJ56_07870 IPR000821 Alanine racemase NJ56_07870 IPR001608 Alanine racemase, N-terminal NJ56_07870 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NJ56_07870 IPR011079 Alanine racemase, C-terminal NJ56_07870 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site NJ56_07870 IPR029066 PLP-binding barrel NJ56_07875 IPR000796 Aspartate/other aminotransferase NJ56_07875 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site NJ56_07875 IPR004839 Aminotransferase, class I/classII NJ56_07875 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_07875 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_07875 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_07880 IPR007351 Uncharacterised protein YjbR NJ56_07880 IPR038056 NJ56_07880 NJ56_07885 IPR003439 ABC transporter-like NJ56_07885 IPR004602 UvrABC system subunit A NJ56_07885 IPR017871 ABC transporter, conserved site NJ56_07885 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_07890 IPR000424 Primosome PriB/single-strand DNA-binding NJ56_07890 IPR011344 Single-stranded DNA-binding protein NJ56_07890 IPR012340 Nucleic acid-binding, OB-fold NJ56_07895 IPR004045 Glutathione S-transferase, N-terminal NJ56_07895 IPR004046 Glutathione S-transferase, C-terminal NJ56_07895 IPR036249 NJ56_07895 NJ56_07895 IPR036282 NJ56_07895 NJ56_07900 IPR006043 Xanthine/uracil/vitamin C permease NJ56_07905 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria NJ56_07905 IPR006153 Cation/H+ exchanger NJ56_07905 IPR038770 NJ56_07905 NJ56_07910 IPR000847 Transcription regulator HTH, LysR NJ56_07910 IPR005119 LysR, substrate-binding NJ56_07910 IPR036388 NJ56_07910 NJ56_07910 IPR036390 NJ56_07910 NJ56_07915 IPR005538 LrgA/CidA family NJ56_07920 IPR007300 CidB/LrgB family NJ56_07925 IPR001765 Carbonic anhydrase NJ56_07925 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site NJ56_07925 IPR036874 NJ56_07925 NJ56_07930 IPR004960 Bacterial lipid A biosynthesis acyltransferase NJ56_07930 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase NJ56_07930 IPR030857 NJ56_07930 NJ56_07940 IPR002197 DNA binding HTH domain, Fis-type NJ56_07940 IPR005412 DNA-binding protein Fis NJ56_07940 IPR009057 Homeodomain-like NJ56_07945 IPR001269 tRNA-dihydrouridine synthase NJ56_07945 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 NJ56_07945 IPR013785 Aldolase-type TIM barrel NJ56_07945 IPR018517 tRNA-dihydrouridine synthase, conserved site NJ56_07945 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal NJ56_07945 IPR032887 NJ56_07945 NJ56_07950 IPR004498 Ribosomal protein L11 methyltransferase NJ56_07950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_07955 IPR001734 Sodium/solute symporter NJ56_07955 IPR011849 Sodium/pantothenate symporter NJ56_07955 IPR018212 Sodium/solute symporter, conserved site NJ56_07955 IPR038377 NJ56_07955 NJ56_07960 IPR010398 Protein of unknown function DUF997 NJ56_07965 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase NJ56_07965 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NJ56_07965 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal NJ56_07965 IPR005482 Biotin carboxylase, C-terminal NJ56_07965 IPR011054 Rudiment single hybrid motif NJ56_07965 IPR013815 ATP-grasp fold, subdomain 1 NJ56_07965 IPR016185 Pre-ATP-grasp domain NJ56_07970 IPR000089 Biotin/lipoyl attachment NJ56_07970 IPR001249 Acetyl-CoA biotin carboxyl carrier NJ56_07970 IPR001882 Biotin-binding site NJ56_07970 IPR011053 Single hybrid motif NJ56_07975 IPR001874 Dehydroquinase, class II NJ56_07975 IPR018509 Dehydroquinase, class II, conserved site NJ56_07975 IPR036441 NJ56_07975 NJ56_07980 IPR013130 Ferric reductase transmembrane component-like domain NJ56_07980 IPR022837 Sulphoxide reductase heme-binding subunit YedZ NJ56_07985 IPR000572 Oxidoreductase, molybdopterin-binding domain NJ56_07985 IPR022867 Sulphoxide reductase catalytic subunit YedY NJ56_07985 IPR036374 NJ56_07985 NJ56_07990 IPR011032 GroES (chaperonin 10)-like NJ56_07990 IPR013149 Alcohol dehydrogenase, C-terminal NJ56_07990 IPR013154 Alcohol dehydrogenase GroES-like NJ56_07990 IPR014188 Acrylyl-CoA reductase AcuI NJ56_07990 IPR020843 Polyketide synthase, enoylreductase NJ56_07990 IPR036291 NJ56_07990 NJ56_07995 IPR000160 GGDEF domain NJ56_07995 IPR001633 EAL domain NJ56_07995 IPR029787 Nucleotide cyclase NJ56_07995 IPR033423 NJ56_07995 NJ56_07995 IPR035919 NJ56_07995 NJ56_08000 IPR004753 Cell shape determining protein MreB/Mrl NJ56_08005 IPR007221 Rod shape-determining protein MreC NJ56_08010 IPR007227 Cell shape-determining protein MreD NJ56_08010 IPR026034 Cell shape-determining protein MreD, proteobacterial type NJ56_08015 IPR003697 Maf-like protein NJ56_08015 IPR029001 Inosine triphosphate pyrophosphatase-like NJ56_08020 IPR003029 Ribosomal protein S1, RNA-binding domain NJ56_08020 IPR004659 Ribonuclease E/G NJ56_08020 IPR012340 Nucleic acid-binding, OB-fold NJ56_08020 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G NJ56_08020 IPR022967 RNA-binding domain, S1 NJ56_08025 IPR011836 Conserved hypothetical protein CHP02099 NJ56_08025 IPR025263 Domain of unknown function DUF3971 NJ56_08025 IPR032712 NJ56_08025 NJ56_08030 IPR003010 Carbon-nitrogen hydrolase NJ56_08030 IPR036526 NJ56_08030 NJ56_08035 IPR002510 TldD/PmbA NJ56_08035 IPR025502 TldD NJ56_08035 IPR035068 NJ56_08035 NJ56_08035 IPR036059 NJ56_08035 NJ56_08040 IPR000847 Transcription regulator HTH, LysR NJ56_08040 IPR005119 LysR, substrate-binding NJ56_08040 IPR036388 NJ56_08040 NJ56_08040 IPR036390 NJ56_08040 NJ56_08045 IPR012451 Protein of unknown function DUF1656 NJ56_08050 IPR006143 RND efflux pump, membrane fusion protein NJ56_08050 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA NJ56_08050 IPR039562 NJ56_08050 NJ56_08055 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein NJ56_08055 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB NJ56_08060 IPR010102 Succinate semialdehyde dehydrogenase NJ56_08060 IPR015590 Aldehyde dehydrogenase domain NJ56_08060 IPR016160 Aldehyde dehydrogenase, cysteine active site NJ56_08060 IPR016161 Aldehyde/histidinol dehydrogenase NJ56_08060 IPR016162 Aldehyde dehydrogenase, N-terminal NJ56_08060 IPR016163 Aldehyde dehydrogenase, C-terminal NJ56_08060 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NJ56_08065 IPR000026 Guanine-specific ribonuclease N1/T1 NJ56_08065 IPR001887 Barnase NJ56_08065 IPR016191 Ribonuclease/ribotoxin NJ56_08070 IPR000468 Barstar (barnase inhibitor) NJ56_08070 IPR035905 NJ56_08070 NJ56_08075 IPR006839 Ribosome-associated, YjgA NJ56_08075 IPR023153 PSPTO4464-like domain NJ56_08080 IPR002510 TldD/PmbA NJ56_08080 IPR035068 NJ56_08080 NJ56_08080 IPR036059 NJ56_08080 NJ56_08085 IPR009155 Cytochrome b562 NJ56_08085 IPR010980 Cytochrome c/b562 NJ56_08090 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal NJ56_08090 IPR023459 Transcription elongation factor GreA/GreB family NJ56_08090 IPR028625 Regulator of nucleoside diphosphate kinase NJ56_08090 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain NJ56_08090 IPR036953 NJ56_08090 NJ56_08105 IPR001757 Cation-transporting P-type ATPase NJ56_08105 IPR004014 Cation-transporting P-type ATPase, N-terminal NJ56_08105 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB NJ56_08105 IPR008250 P-type ATPase, A domain NJ56_08105 IPR018303 P-type ATPase, phosphorylation site NJ56_08105 IPR023214 HAD-like domain NJ56_08105 IPR023298 P-type ATPase, transmembrane domain NJ56_08105 IPR023299 P-type ATPase, cytoplasmic domain N NJ56_08105 IPR036412 NJ56_08105 NJ56_08110 IPR000843 Transcription regulator HTH, LacI NJ56_08110 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_08110 IPR012771 Trehalose operon repressor NJ56_08110 IPR028082 Periplasmic binding protein-like I NJ56_08115 IPR001996 Phosphotransferase system, IIB component, type 1 NJ56_08115 IPR003352 Phosphotransferase system, EIIC NJ56_08115 IPR011296 Phosphotransferase system, trehalose-specific IIBC component NJ56_08115 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site NJ56_08115 IPR036878 NJ56_08115 NJ56_08120 IPR006047 Glycosyl hydrolase, family 13, catalytic domain NJ56_08120 IPR012769 Trehalose-6-phosphate hydrolase NJ56_08120 IPR013780 Glycosyl hydrolase, family 13, all-beta NJ56_08120 IPR017853 Glycoside hydrolase, superfamily NJ56_08120 IPR032091 NJ56_08120 NJ56_08125 IPR006056 Enamine/imine deaminase YjgF-like NJ56_08125 IPR006175 YjgF/Yer057p/UK114 family NJ56_08125 IPR019897 YjgF-like protein, conserved site NJ56_08125 IPR035959 NJ56_08125 NJ56_08130 IPR002801 Aspartate transcarbamylase regulatory subunit NJ56_08130 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal NJ56_08130 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal NJ56_08130 IPR036792 NJ56_08130 NJ56_08130 IPR036793 NJ56_08130 NJ56_08135 IPR002082 Aspartate carbamoyltransferase NJ56_08135 IPR006130 Aspartate/ornithine carbamoyltransferase NJ56_08135 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain NJ56_08135 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding NJ56_08135 IPR036901 NJ56_08135 NJ56_08140 IPR000032 Phosphocarrier HPr protein-like NJ56_08140 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site NJ56_08140 IPR035895 NJ56_08140 NJ56_08145 IPR005337 ATPase, P-loop-containing NJ56_08145 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_08150 IPR002178 PTS EIIA type-2 domain NJ56_08150 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN NJ56_08150 IPR016152 Phosphotransferase/anion transporter NJ56_08155 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein NJ56_08155 IPR036567 NJ56_08155 NJ56_08160 IPR000394 RNA polymerase sigma factor 54 NJ56_08160 IPR007046 RNA polymerase sigma factor 54, core-binding NJ56_08160 IPR007634 RNA polymerase sigma factor 54, DNA-binding NJ56_08160 IPR038709 NJ56_08160 NJ56_08165 IPR003439 ABC transporter-like NJ56_08165 IPR003593 AAA+ ATPase domain NJ56_08165 IPR017871 ABC transporter, conserved site NJ56_08165 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_08165 IPR030921 NJ56_08165 NJ56_08165 IPR032823 NJ56_08165 NJ56_08170 IPR005653 Organic solvent tolerance-like, N-terminal NJ56_08170 IPR014340 Lipopolysaccharide assembly, LptA NJ56_08175 IPR010664 Lipopolysaccharide assembly, LptC-related NJ56_08175 IPR026265 Lipopolysaccharide export system protein LptC NJ56_08180 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase NJ56_08180 IPR023214 HAD-like domain NJ56_08180 IPR036412 NJ56_08180 NJ56_08185 IPR000644 CBS domain NJ56_08185 IPR001347 Sugar isomerase (SIS) NJ56_08185 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type NJ56_08190 IPR004481 Sodium/potassium/calcium exchanger NJ56_08190 IPR004837 Sodium/calcium exchanger membrane region NJ56_08195 IPR003439 ABC transporter-like NJ56_08195 IPR003593 AAA+ ATPase domain NJ56_08195 IPR017871 ABC transporter, conserved site NJ56_08195 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_08200 IPR003453 Permease domain NJ56_08200 IPR030802 NJ56_08200 NJ56_08205 IPR003399 Mammalian cell entry-related NJ56_08205 IPR030970 NJ56_08205 NJ56_08210 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC NJ56_08215 IPR002645 STAS domain NJ56_08215 IPR036513 NJ56_08215 NJ56_08220 IPR002634 BolA protein NJ56_08220 IPR036065 NJ56_08220 NJ56_08225 IPR001986 Enolpyruvate transferase domain NJ56_08225 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NJ56_08225 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta NJ56_08225 IPR036968 NJ56_08225 NJ56_08230 IPR001478 PDZ domain NJ56_08230 IPR001940 Peptidase S1C NJ56_08230 IPR009003 Trypsin-like cysteine/serine peptidase domain NJ56_08230 IPR011783 Peptidase S1C, DegS NJ56_08230 IPR036034 NJ56_08230 NJ56_08235 IPR001478 PDZ domain NJ56_08235 IPR001940 Peptidase S1C NJ56_08235 IPR009003 Trypsin-like cysteine/serine peptidase domain NJ56_08235 IPR011782 Peptidase S1C, Do NJ56_08235 IPR036034 NJ56_08235 NJ56_08240 IPR009386 Protein of unknown function DUF1043 NJ56_08245 IPR005654 ATPase, AFG1-like NJ56_08245 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_08245 IPR030870 NJ56_08245 NJ56_08255 IPR005822 Ribosomal protein L13 NJ56_08255 IPR005823 Ribosomal protein L13, bacterial-type NJ56_08255 IPR023563 Ribosomal protein L13, conserved site NJ56_08255 IPR036899 NJ56_08255 NJ56_08260 IPR000754 Ribosomal protein S9 NJ56_08260 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_08260 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_08260 IPR020574 Ribosomal protein S9, conserved site NJ56_08260 IPR023035 Ribosomal protein S9, bacterial/plastid NJ56_08265 IPR004045 Glutathione S-transferase, N-terminal NJ56_08265 IPR004046 Glutathione S-transferase, C-terminal NJ56_08265 IPR036249 NJ56_08265 NJ56_08265 IPR036282 NJ56_08265 NJ56_08270 IPR007481 Stringent starvation protein B NJ56_08270 IPR036760 NJ56_08270 NJ56_08280 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 NJ56_08280 IPR009051 Alpha-helical ferredoxin NJ56_08280 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain NJ56_08280 IPR028261 Dihydroprymidine dehydrogenase domain II NJ56_08280 IPR036188 NJ56_08280 NJ56_08285 IPR002489 Glutamate synthase, alpha subunit, C-terminal NJ56_08285 IPR002932 Glutamate synthase domain NJ56_08285 IPR006982 Glutamate synthase, central-N NJ56_08285 IPR013785 Aldolase-type TIM barrel NJ56_08285 IPR017932 Glutamine amidotransferase type 2 domain NJ56_08285 IPR029055 Nucleophile aminohydrolases, N-terminal NJ56_08285 IPR036485 NJ56_08285 NJ56_08290 IPR005911 Conserved hypothetical protein CHP01212 NJ56_08290 IPR006638 Elongator protein 3/MiaB/NifB NJ56_08290 IPR007197 Radical SAM NJ56_08290 IPR023404 Radical SAM, alpha/beta horseshoe NJ56_08290 IPR032432 NJ56_08290 NJ56_08295 IPR000014 PAS domain NJ56_08295 IPR001789 Signal transduction response regulator, receiver domain NJ56_08295 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_08295 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_08295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_08295 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NJ56_08295 IPR011006 CheY-like superfamily NJ56_08295 IPR013767 PAS fold NJ56_08295 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB NJ56_08295 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain NJ56_08295 IPR035965 NJ56_08295 NJ56_08295 IPR036097 NJ56_08295 NJ56_08295 IPR036641 NJ56_08295 NJ56_08295 IPR036890 NJ56_08295 NJ56_08305 IPR026041 Enhancing lycopene biosynthesis protein 2 NJ56_08305 IPR029062 Class I glutamine amidotransferase-like NJ56_08310 IPR001264 Glycosyl transferase, family 51 NJ56_08310 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase NJ56_08310 IPR023346 Lysozyme-like domain NJ56_08310 IPR036950 NJ56_08310 NJ56_08315 IPR007055 BON domain NJ56_08315 IPR014004 Transport-associated and nodulation domain, bacteria NJ56_08320 IPR001347 Sugar isomerase (SIS) NJ56_08320 IPR023070 DnaA initiator-associating protein NJ56_08325 IPR003509 Uncharacterised protein family UPF0102 NJ56_08325 IPR011335 Restriction endonuclease type II-like NJ56_08325 IPR011856 tRNA endonuclease-like domain NJ56_08330 IPR007443 Penicillin-binding protein activator LpoA NJ56_08330 IPR011990 Tetratricopeptide-like helical domain NJ56_08330 IPR028082 Periplasmic binding protein-like I NJ56_08335 IPR000878 Tetrapyrrole methylase NJ56_08335 IPR008189 rRNA small subunit methyltransferase I NJ56_08335 IPR014776 Tetrapyrrole methylase, subdomain 2 NJ56_08335 IPR014777 Tetrapyrrole methylase, subdomain 1 NJ56_08335 IPR018063 SAM-dependent methyltransferase RsmI, conserved site NJ56_08335 IPR035996 NJ56_08335 NJ56_08345 IPR003829 Pirin, N-terminal domain NJ56_08345 IPR011051 RmlC-like cupin domain NJ56_08345 IPR012093 Pirin NJ56_08345 IPR014710 RmlC-like jelly roll fold NJ56_08350 IPR000847 Transcription regulator HTH, LysR NJ56_08350 IPR005119 LysR, substrate-binding NJ56_08350 IPR036388 NJ56_08350 NJ56_08350 IPR036390 NJ56_08350 NJ56_08355 IPR032808 NJ56_08355 NJ56_08360 IPR025612 YqjK-like protein NJ56_08365 IPR009937 Protein of unknown function DUF1469 NJ56_08370 IPR010279 Protein of unknown function DUF883, ElaB NJ56_08375 IPR009468 Protein of unknown function DUF1090 NJ56_08380 IPR026574 Modulator protein MzrA NJ56_08380 IPR027398 SecD export protein N-terminal TM domain NJ56_08385 IPR032816 NJ56_08385 NJ56_08395 IPR000524 Transcription regulator HTH, GntR NJ56_08395 IPR008920 Transcription regulator FadR/GntR, C-terminal NJ56_08395 IPR011711 GntR, C-terminal NJ56_08395 IPR036388 NJ56_08395 NJ56_08395 IPR036390 NJ56_08395 NJ56_08400 IPR011701 Major facilitator superfamily NJ56_08400 IPR036259 NJ56_08400 NJ56_08405 IPR003766 Uronate isomerase NJ56_08405 IPR032466 NJ56_08405 NJ56_08410 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_08410 IPR013118 Mannitol dehydrogenase, C-terminal NJ56_08410 IPR013131 Mannitol dehydrogenase, N-terminal NJ56_08410 IPR013328 Dehydrogenase, multihelical NJ56_08410 IPR036291 NJ56_08410 NJ56_08415 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal NJ56_08415 IPR013974 SAF domain NJ56_08420 IPR019629 Uncharacterised protein family HI1736/YgjV NJ56_08420 IPR026267 Inner membrane protein YgjV NJ56_08425 IPR001991 Sodium:dicarboxylate symporter NJ56_08425 IPR023025 Serine/threonine transporter SstT NJ56_08425 IPR036458 NJ56_08425 NJ56_08430 IPR005496 Integral membrane protein TerC NJ56_08430 IPR022369 Integral membrane protein TerC, riboswitch-linked NJ56_08435 IPR000683 Oxidoreductase, N-terminal NJ56_08435 IPR036291 NJ56_08435 NJ56_08440 IPR002725 Protein of unknown function DUF45 NJ56_08445 IPR005546 Autotransporter beta-domain NJ56_08445 IPR006315 Outer membrane autotransporter barrel NJ56_08445 IPR011050 Pectin lyase fold/virulence factor NJ56_08445 IPR012332 P22 tailspike C-terminal domain-like NJ56_08445 IPR013425 Autotransporter-associated beta strand repeat NJ56_08445 IPR036709 NJ56_08445 NJ56_08450 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_08450 IPR007848 Methyltransferase small domain NJ56_08450 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD NJ56_08450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_08455 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NJ56_08455 IPR013785 Aldolase-type TIM barrel NJ56_08455 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain NJ56_08455 IPR036188 NJ56_08455 NJ56_08460 IPR005565 Haemolysin activator HlyB NJ56_08460 IPR013686 Polypeptide-transport-associated, ShlB-type NJ56_08460 IPR027282 Two partner secretion pathway transporter NJ56_08460 IPR035251 NJ56_08460 NJ56_08475 IPR014944 Toxin SymE-like NJ56_08480 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_08480 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_08485 IPR002694 Zinc finger, CHC2-type NJ56_08485 IPR036977 NJ56_08485 NJ56_08485 IPR037068 NJ56_08485 NJ56_08490 IPR002104 Integrase, catalytic NJ56_08490 IPR010998 Integrase, Lambda-type, N-terminal NJ56_08490 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_08490 IPR013762 Integrase-like, catalytic core NJ56_08510 IPR014944 Toxin SymE-like NJ56_08515 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_08515 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_08520 IPR002694 Zinc finger, CHC2-type NJ56_08520 IPR036977 NJ56_08520 NJ56_08520 IPR037068 NJ56_08520 NJ56_08525 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_08525 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_08530 IPR002694 Zinc finger, CHC2-type NJ56_08530 IPR036977 NJ56_08530 NJ56_08530 IPR037068 NJ56_08530 NJ56_08535 IPR002104 Integrase, catalytic NJ56_08535 IPR010998 Integrase, Lambda-type, N-terminal NJ56_08535 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_08535 IPR013762 Integrase-like, catalytic core NJ56_08555 IPR014944 Toxin SymE-like NJ56_08565 IPR018958 SMI1/KNR4 like domain NJ56_08565 IPR037883 NJ56_08565 NJ56_08585 IPR024409 Protein of unknown function DUF3833 NJ56_08590 IPR003333 Mycolic acid cyclopropane synthase NJ56_08590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_08595 IPR010775 Protein of unknown function DUF1365 NJ56_08600 IPR002937 Amine oxidase NJ56_08600 IPR036188 NJ56_08600 NJ56_08605 IPR002347 Glucose/ribitol dehydrogenase NJ56_08605 IPR020904 Short-chain dehydrogenase/reductase, conserved site NJ56_08605 IPR036291 NJ56_08605 NJ56_08610 IPR032710 NJ56_08610 NJ56_08610 IPR037401 NJ56_08610 NJ56_08620 IPR027379 Cardiolipin synthase N-terminal NJ56_08630 IPR000943 RNA polymerase sigma-70 NJ56_08630 IPR007127 RNA polymerase sigma factor 70, region 1.1 NJ56_08630 IPR007624 RNA polymerase sigma-70 region 3 NJ56_08630 IPR007627 RNA polymerase sigma-70 region 2 NJ56_08630 IPR007630 RNA polymerase sigma-70 region 4 NJ56_08630 IPR007631 RNA polymerase sigma factor 70, non-essential domain NJ56_08630 IPR009042 RNA polymerase sigma-70 region 1.2 NJ56_08630 IPR012760 RNA polymerase sigma factor RpoD, C-terminal NJ56_08630 IPR013324 RNA polymerase sigma factor, region 3/4 NJ56_08630 IPR013325 RNA polymerase sigma factor, region 2 NJ56_08630 IPR014284 RNA polymerase sigma-70 like domain NJ56_08630 IPR028630 RNA polymerase sigma factor RpoD NJ56_08630 IPR036388 NJ56_08630 NJ56_08635 IPR002694 Zinc finger, CHC2-type NJ56_08635 IPR006171 Toprim domain NJ56_08635 IPR006295 DNA primase, DnaG NJ56_08635 IPR013173 DNA primase DnaG, DnaB-binding domain NJ56_08635 IPR013264 DNA primase, catalytic core, N-terminal NJ56_08635 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NJ56_08635 IPR019475 DNA primase, DnaB-helicase binding domain NJ56_08635 IPR030846 NJ56_08635 NJ56_08635 IPR036977 NJ56_08635 NJ56_08635 IPR037068 NJ56_08635 NJ56_08640 IPR001911 Ribosomal protein S21 NJ56_08640 IPR018278 Ribosomal protein S21, conserved site NJ56_08640 IPR038380 NJ56_08640 NJ56_08645 IPR000905 Gcp-like domain NJ56_08645 IPR017860 Peptidase M22, conserved site NJ56_08645 IPR017861 Kae1/YgjD family NJ56_08645 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD NJ56_08650 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY NJ56_08655 IPR006156 Dihydroneopterin aldolase NJ56_08655 IPR006157 Dihydroneopterin aldolase/epimerase domain NJ56_08660 IPR003824 Undecaprenyl-diphosphatase UppP NJ56_08665 IPR002646 Poly A polymerase, head domain NJ56_08665 IPR003607 HD/PDEase domain NJ56_08665 IPR006674 HD domain NJ56_08665 IPR012006 tRNA nucleotidyltransferase, proteobacteria NJ56_08665 IPR032828 NJ56_08665 NJ56_08670 IPR003646 SH3-like domain, bacterial-type NJ56_08670 IPR016476 SH3 domain protein NJ56_08675 IPR023577 CYTH-like domain NJ56_08675 IPR033469 NJ56_08675 NJ56_08680 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain NJ56_08680 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase NJ56_08680 IPR023057 Glutamate-ammonia-ligase adenylyltransferase NJ56_08685 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site NJ56_08685 IPR004821 Cytidyltransferase-like domain NJ56_08685 IPR011611 Carbohydrate kinase PfkB NJ56_08685 IPR011913 RfaE bifunctional protein, domain I NJ56_08685 IPR011914 RfaE bifunctional protein, domain II NJ56_08685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_08685 IPR023030 Bifunctional protein HldE NJ56_08685 IPR029056 Ribokinase-like NJ56_08695 IPR007475 Membrane fusogenic activity NJ56_08700 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB NJ56_08700 IPR017945 DHBP synthase RibB-like alpha/beta domain NJ56_08705 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B NJ56_08705 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type NJ56_08710 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain NJ56_08710 IPR016185 Pre-ATP-grasp domain NJ56_08715 IPR009576 Biofilm formation YgiB NJ56_08720 IPR003423 Outer membrane efflux protein NJ56_08720 IPR010130 Type I secretion outer membrane protein, TolC NJ56_08725 IPR000086 NUDIX hydrolase domain NJ56_08725 IPR004385 Nucleoside diphosphate pyrophosphatase NJ56_08725 IPR015797 NUDIX hydrolase domain-like NJ56_08725 IPR020084 NUDIX hydrolase, conserved site NJ56_08730 IPR009659 Protein of unknown function DUF1249 NJ56_08735 IPR004843 Calcineurin-like phosphoesterase domain, apaH type NJ56_08735 IPR013622 Calcineurin-like phosphoesterase C-terminal NJ56_08735 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA NJ56_08735 IPR029052 Metallo-dependent phosphatase-like NJ56_08740 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA NJ56_08740 IPR029058 Alpha/Beta hydrolase fold NJ56_08745 IPR001241 DNA topoisomerase, type IIA NJ56_08745 IPR002288 DNA gyrase B subunit, C-terminal NJ56_08745 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_08745 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative NJ56_08745 IPR006171 Toprim domain NJ56_08745 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 NJ56_08745 IPR013759 DNA topoisomerase, type IIA, central domain NJ56_08745 IPR013760 DNA topoisomerase, type IIA-like domain NJ56_08745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_08745 IPR018522 DNA topoisomerase, type IIA, conserved site NJ56_08745 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_08745 IPR036890 NJ56_08745 NJ56_08750 IPR000847 Transcription regulator HTH, LysR NJ56_08750 IPR005119 LysR, substrate-binding NJ56_08750 IPR036388 NJ56_08750 NJ56_08750 IPR036390 NJ56_08750 NJ56_08755 IPR003680 Flavodoxin-like fold NJ56_08755 IPR029039 Flavoprotein-like NJ56_08765 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal NJ56_08765 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative NJ56_08765 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel NJ56_08765 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain NJ56_08765 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta NJ56_08765 IPR013760 DNA topoisomerase, type IIA-like domain NJ56_08765 IPR035516 NJ56_08765 NJ56_08770 IPR002123 Phospholipid/glycerol acyltransferase NJ56_08770 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase NJ56_08775 IPR008972 Cupredoxin NJ56_08775 IPR011706 Multicopper oxidase, type 2 NJ56_08775 IPR011707 Multicopper oxidase, type 3 NJ56_08775 IPR026589 Cell division protein FtsP NJ56_08780 IPR006638 Elongator protein 3/MiaB/NifB NJ56_08780 IPR007197 Radical SAM NJ56_08780 IPR013704 Uncharacterised protein family UPF0313, N-terminal NJ56_08780 IPR020612 Methylthiotransferase, conserved site NJ56_08780 IPR022946 Uncharacterised protein family UPF0313 NJ56_08780 IPR023404 Radical SAM, alpha/beta horseshoe NJ56_08780 IPR024560 Uncharacterised protein family UPF0313, C-terminal NJ56_08785 IPR018170 Aldo/keto reductase, conserved site NJ56_08785 IPR020471 Aldo/keto reductase subgroup NJ56_08785 IPR023210 NADP-dependent oxidoreductase domain NJ56_08785 IPR036812 NJ56_08785 NJ56_08790 IPR001670 Alcohol dehydrogenase, iron-type NJ56_08790 IPR018211 Alcohol dehydrogenase, iron-type, conserved site NJ56_08795 IPR009057 Homeodomain-like NJ56_08795 IPR009594 Transcription regulator HTH, AraC, N-terminal NJ56_08795 IPR018060 DNA binding HTH domain, AraC-type NJ56_08800 IPR032816 NJ56_08800 NJ56_08805 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme NJ56_08805 IPR006233 Cystathionine beta-lyase, bacterial NJ56_08805 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_08805 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_08805 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_08810 IPR002898 MotA/TolQ/ExbB proton channel NJ56_08810 IPR014164 TonB-system energizer ExbB type-1 NJ56_08815 IPR003400 Biopolymer transport protein ExbD/TolR NJ56_08815 IPR014170 TonB system transport protein ExbD type-1 NJ56_08820 IPR036465 NJ56_08820 NJ56_08825 IPR031582 NJ56_08825 NJ56_08830 IPR012495 TadE-like NJ56_08835 IPR011990 Tetratricopeptide-like helical domain NJ56_08840 IPR018076 Type II secretion system F domain NJ56_08845 IPR018076 Type II secretion system F domain NJ56_08850 IPR001482 Type II secretion system protein E NJ56_08850 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_08855 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_08865 IPR001775 GspD/PilQ family NJ56_08865 IPR004846 Type II/III secretion system NJ56_08865 IPR032789 NJ56_08865 NJ56_08875 IPR000045 Prepilin type IV endopeptidase, peptidase domain NJ56_08885 IPR001867 Signal transduction response regulator, C-terminal NJ56_08885 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_08885 IPR036388 NJ56_08885 NJ56_08890 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal NJ56_08890 IPR036291 NJ56_08890 NJ56_08895 IPR000531 TonB-dependent receptor, beta-barrel NJ56_08895 IPR010105 TonB-dependent siderophore receptor NJ56_08895 IPR012910 TonB-dependent receptor, plug NJ56_08895 IPR036942 NJ56_08895 NJ56_08895 IPR037066 NJ56_08895 NJ56_08900 IPR000801 Putative esterase NJ56_08900 IPR013783 Immunoglobulin-like fold NJ56_08900 IPR014756 Immunoglobulin E-set NJ56_08900 IPR021764 Enterochelin esterase, N-terminal NJ56_08900 IPR029058 Alpha/Beta hydrolase fold NJ56_08905 IPR005153 MbtH-like protein NJ56_08905 IPR038020 NJ56_08905 NJ56_08910 IPR000873 AMP-dependent synthetase/ligase NJ56_08910 IPR001031 Thioesterase NJ56_08910 IPR001242 Condensation domain NJ56_08910 IPR006162 Phosphopantetheine attachment site NJ56_08910 IPR009081 Acyl carrier protein-like NJ56_08910 IPR010071 Amino acid adenylation domain NJ56_08910 IPR020802 Polyketide synthase, thioesterase domain NJ56_08910 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NJ56_08910 IPR020845 AMP-binding, conserved site NJ56_08910 IPR023213 Chloramphenicol acetyltransferase-like domain NJ56_08910 IPR025110 AMP-binding enzyme C-terminal domain NJ56_08910 IPR029058 Alpha/Beta hydrolase fold NJ56_08910 IPR036736 NJ56_08910 NJ56_08920 IPR003439 ABC transporter-like NJ56_08920 IPR003593 AAA+ ATPase domain NJ56_08920 IPR017871 ABC transporter, conserved site NJ56_08920 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_08925 IPR000522 ABC transporter, permease protein NJ56_08925 IPR037294 NJ56_08925 NJ56_08930 IPR000522 ABC transporter, permease protein NJ56_08930 IPR037294 NJ56_08930 NJ56_08935 IPR011701 Major facilitator superfamily NJ56_08935 IPR036259 NJ56_08935 NJ56_08940 IPR002491 ABC transporter periplasmic binding domain NJ56_08945 IPR004561 Isochorismate synthase NJ56_08945 IPR005801 ADC synthase NJ56_08945 IPR015890 Chorismate binding, C-terminal NJ56_08950 IPR000873 AMP-dependent synthetase/ligase NJ56_08950 IPR011963 2,3-dihydroxybenzoate-AMP ligase NJ56_08950 IPR020845 AMP-binding, conserved site NJ56_08950 IPR025110 AMP-binding enzyme C-terminal domain NJ56_08955 IPR000868 Isochorismatase-like NJ56_08955 IPR009081 Acyl carrier protein-like NJ56_08955 IPR016291 Isochorismatase NJ56_08955 IPR036380 NJ56_08955 NJ56_08955 IPR036736 NJ56_08955 NJ56_08960 IPR002347 Glucose/ribitol dehydrogenase NJ56_08960 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase NJ56_08960 IPR020904 Short-chain dehydrogenase/reductase, conserved site NJ56_08960 IPR036291 NJ56_08960 NJ56_08965 IPR000873 AMP-dependent synthetase/ligase NJ56_08965 IPR020845 AMP-binding, conserved site NJ56_08970 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NJ56_08970 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NJ56_08970 IPR005789 Threonine dehydratase, catabolic NJ56_08970 IPR036052 NJ56_08970 NJ56_08975 IPR004694 Hydroxy amino acid transporter NJ56_08975 IPR013057 Amino acid transporter, transmembrane NJ56_08975 IPR023726 Threonine/serine transporter TdcC NJ56_08980 IPR000890 Aliphatic acid kinase, short-chain NJ56_08980 IPR004372 Acetate/Proprionate kinase NJ56_08980 IPR023865 Aliphatic acid kinase, short-chain, conserved site NJ56_08980 IPR024917 Propionate kinase NJ56_08985 IPR001150 Glycine radical domain NJ56_08985 IPR004184 Pyruvate formate lyase domain NJ56_08985 IPR005949 Formate acetyltransferase NJ56_08985 IPR019777 Formate C-acetyltransferase glycine radical, conserved site NJ56_08990 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site NJ56_08990 IPR011611 Carbohydrate kinase PfkB NJ56_08990 IPR017583 Tagatose/fructose phosphokinase NJ56_08990 IPR029056 Ribokinase-like NJ56_08995 IPR000644 CBS domain NJ56_08995 IPR001347 Sugar isomerase (SIS) NJ56_08995 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type NJ56_09000 IPR001034 HTH DeoR N-terminal domain NJ56_09000 IPR014036 DeoR C-terminal sensor domain NJ56_09000 IPR018356 Transcription regulator, HTH DeoR-type, conserved site NJ56_09000 IPR036388 NJ56_09000 NJ56_09000 IPR036390 NJ56_09000 NJ56_09000 IPR037171 NJ56_09000 NJ56_09005 IPR009693 Glucitol operon activator NJ56_09010 IPR002347 Glucose/ribitol dehydrogenase NJ56_09010 IPR020904 Short-chain dehydrogenase/reductase, conserved site NJ56_09010 IPR036291 NJ56_09010 NJ56_09015 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component NJ56_09015 IPR036665 NJ56_09015 NJ56_09020 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II NJ56_09020 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal NJ56_09020 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal NJ56_09025 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor NJ56_09035 IPR032497 NJ56_09035 NJ56_09035 IPR038304 NJ56_09035 NJ56_09040 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_09050 IPR000189 Prokaryotic transglycosylase, active site NJ56_09050 IPR008258 Lytic transglycosylase-like SLT domain NJ56_09050 IPR023346 Lysozyme-like domain NJ56_09050 IPR023664 Murein transglycosylase-C NJ56_09050 IPR024570 Murein transglycosylase-C, N-terminal NJ56_09055 IPR007457 Fe(II) trafficking protein YggX NJ56_09055 IPR036766 NJ56_09055 NJ56_09060 IPR000445 Helix-hairpin-helix motif NJ56_09060 IPR003265 HhH-GPD domain NJ56_09060 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif NJ56_09060 IPR004035 Endonuclease III, iron-sulphur binding site NJ56_09060 IPR004036 Endonuclease III-like, conserved site-2 NJ56_09060 IPR005760 A/G-specific adenine glycosylase MutY NJ56_09060 IPR011257 DNA glycosylase NJ56_09060 IPR015797 NUDIX hydrolase domain-like NJ56_09060 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NJ56_09060 IPR029119 MutY, C-terminal NJ56_09065 IPR003358 tRNA (guanine-N-7) methyltransferase NJ56_09065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_09070 IPR007416 Protein of unknown function DUF469 NJ56_09075 IPR012338 Beta-lactamase/transpeptidase-like NJ56_09075 IPR015868 Glutaminase NJ56_09080 IPR021307 Protein of unknown function DUF2884 NJ56_09085 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related NJ56_09085 IPR006638 Elongator protein 3/MiaB/NifB NJ56_09085 IPR007197 Radical SAM NJ56_09085 IPR023404 Radical SAM, alpha/beta horseshoe NJ56_09090 IPR002637 Ham1-like protein NJ56_09090 IPR020922 Non-canonical purine NTP pyrophosphatase NJ56_09090 IPR029001 Inosine triphosphate pyrophosphatase-like NJ56_09095 IPR003746 Protein of unknown function DUF167 NJ56_09095 IPR005228 Conserved hypothetical protein CHP00251 NJ56_09095 IPR036591 NJ56_09095 NJ56_09100 IPR003425 Uncharacterised protein family Ycf19 NJ56_09105 IPR000304 Pyrroline-5-carboxylate reductase NJ56_09105 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_09105 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal NJ56_09105 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain NJ56_09105 IPR036291 NJ56_09105 NJ56_09110 IPR001608 Alanine racemase, N-terminal NJ56_09110 IPR011078 Uncharacterised protein family UPF0001 NJ56_09110 IPR029066 PLP-binding barrel NJ56_09115 IPR001482 Type II secretion system protein E NJ56_09115 IPR006321 Pilus retraction protein PilT NJ56_09115 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_09120 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type NJ56_09120 IPR017754 Agmatine deiminase NJ56_09125 IPR003010 Carbon-nitrogen hydrolase NJ56_09125 IPR017755 N-carbamoylputrescine amidase NJ56_09125 IPR036526 NJ56_09125 NJ56_09130 IPR005227 Resolvase, holliday junction-type, YqgF-like NJ56_09130 IPR006641 YqgF/RNase H-like domain NJ56_09130 IPR012337 Ribonuclease H-like domain NJ56_09130 IPR037027 NJ56_09130 NJ56_09135 IPR003774 Protein of unknown function UPF0301 NJ56_09140 IPR004215 Prokaryotic glutathione synthetase, N-terminal NJ56_09140 IPR004218 Prokaryotic glutathione synthetase, ATP-binding NJ56_09140 IPR006284 Glutathione synthetase, prokaryotic NJ56_09140 IPR013815 ATP-grasp fold, subdomain 1 NJ56_09140 IPR016185 Pre-ATP-grasp domain NJ56_09145 IPR006700 Ribosomal RNA small subunit methyltransferase E NJ56_09145 IPR015947 PUA-like domain NJ56_09145 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NJ56_09145 IPR029028 Alpha/beta knot methyltransferases NJ56_09150 IPR007346 Endonuclease I NJ56_09155 IPR006640 Domain of unknown function SprT-like NJ56_09155 IPR023483 Uncharacterised protein family SprT NJ56_09155 IPR035240 NJ56_09155 NJ56_09160 IPR001845 HTH ArsR-type DNA-binding domain NJ56_09160 IPR036388 NJ56_09160 NJ56_09160 IPR036390 NJ56_09160 NJ56_09165 IPR007272 Sulphur transport domain NJ56_09175 IPR002133 S-adenosylmethionine synthetase NJ56_09175 IPR022628 S-adenosylmethionine synthetase, N-terminal NJ56_09175 IPR022629 S-adenosylmethionine synthetase, central domain NJ56_09175 IPR022630 S-adenosylmethionine synthetase, C-terminal NJ56_09175 IPR022631 S-adenosylmethionine synthetase, conserved site NJ56_09175 IPR022636 S-adenosylmethionine synthetase superfamily NJ56_09180 IPR000183 Ornithine/DAP/Arg decarboxylase NJ56_09180 IPR002985 Arginine decarboxylase NJ56_09180 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NJ56_09180 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal NJ56_09180 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site NJ56_09180 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site NJ56_09180 IPR029066 PLP-binding barrel NJ56_09185 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NJ56_09185 IPR036922 NJ56_09185 NJ56_09190 IPR005474 Transketolase, N-terminal NJ56_09190 IPR005475 Transketolase-like, pyrimidine-binding domain NJ56_09190 IPR005478 Transketolase, bacterial-like NJ56_09190 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II NJ56_09190 IPR020826 Transketolase binding site NJ56_09190 IPR029061 Thiamin diphosphate-binding fold NJ56_09190 IPR033248 NJ56_09190 NJ56_09195 IPR006422 D-erythrose-4-phosphate dehydrogenase NJ56_09195 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain NJ56_09195 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain NJ56_09195 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site NJ56_09195 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family NJ56_09195 IPR036291 NJ56_09195 NJ56_09200 IPR001576 Phosphoglycerate kinase NJ56_09200 IPR015824 Phosphoglycerate kinase, N-terminal NJ56_09200 IPR015911 Phosphoglycerate kinase, conserved site NJ56_09200 IPR036043 NJ56_09200 NJ56_09205 IPR000771 Ketose-bisphosphate aldolase, class-II NJ56_09205 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype NJ56_09205 IPR013785 Aldolase-type TIM barrel NJ56_09210 IPR006685 Mechanosensitive ion channel MscS NJ56_09210 IPR006686 Mechanosensitive ion channel MscS, conserved site NJ56_09210 IPR008910 Conserved TM helix NJ56_09210 IPR010920 Like-Sm (LSM) domain NJ56_09210 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 NJ56_09210 IPR011066 Mechanosensitive ion channel MscS, C-terminal NJ56_09210 IPR023408 NJ56_09210 NJ56_09215 IPR001123 Lysine-type exporter protein (LYSE/YGGA) NJ56_09215 IPR004777 L-lysine exporter/arginine exporter NJ56_09215 IPR023445 Arginine exporter protein ArgO, enterobacteria NJ56_09220 IPR007497 Protein of unknown function DUF541 NJ56_09225 IPR000847 Transcription regulator HTH, LysR NJ56_09225 IPR005119 LysR, substrate-binding NJ56_09225 IPR017685 Transcription regulator ArgP NJ56_09225 IPR023490 Chromosome initiation inhibitor NJ56_09225 IPR036388 NJ56_09225 NJ56_09225 IPR036390 NJ56_09225 NJ56_09230 IPR004788 Ribose 5-phosphate isomerase, type A NJ56_09230 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup NJ56_09230 IPR037171 NJ56_09230 NJ56_09235 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NJ56_09235 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NJ56_09235 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NJ56_09235 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NJ56_09235 IPR036291 NJ56_09235 NJ56_09240 IPR002698 5-formyltetrahydrofolate cyclo-ligase NJ56_09240 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain NJ56_09240 IPR037171 NJ56_09240 NJ56_09250 IPR007838 Cell division protein ZapA-like NJ56_09250 IPR023771 Cell division protein ZapA, eubacteria NJ56_09250 IPR036192 NJ56_09250 NJ56_09255 IPR011978 Uncharacterised protein family UPF0149 NJ56_09255 IPR036255 NJ56_09255 NJ56_09260 IPR000994 Peptidase M24, structural domain NJ56_09260 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site NJ56_09260 IPR001714 Peptidase M24, methionine aminopeptidase NJ56_09260 IPR007865 Aminopeptidase P, N-terminal NJ56_09260 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal NJ56_09260 IPR036005 NJ56_09260 NJ56_09265 IPR002938 Monooxygenase, FAD-binding NJ56_09265 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 NJ56_09265 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase NJ56_09265 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site NJ56_09265 IPR036188 NJ56_09265 NJ56_09270 IPR002938 Monooxygenase, FAD-binding NJ56_09270 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 NJ56_09270 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site NJ56_09270 IPR036188 NJ56_09270 NJ56_09275 IPR006222 Glycine cleavage T-protein, N-terminal NJ56_09275 IPR006223 Glycine cleavage system T protein NJ56_09275 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain NJ56_09275 IPR022903 Glycine cleavage system T protein, bacteria NJ56_09275 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 NJ56_09275 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA NJ56_09275 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain NJ56_09280 IPR002930 Glycine cleavage system H-protein NJ56_09280 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NJ56_09280 IPR011053 Single hybrid motif NJ56_09280 IPR017453 Glycine cleavage system H-protein, subgroup NJ56_09280 IPR033753 NJ56_09280 NJ56_09285 IPR003437 Glycine cleavage system P protein, homodimeric NJ56_09285 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_09285 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_09285 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_09285 IPR020581 Glycine cleavage system P protein NJ56_09295 IPR004254 Hly-III-related NJ56_09295 IPR005744 HylII NJ56_09300 IPR006222 Glycine cleavage T-protein, N-terminal NJ56_09300 IPR017703 YgfZ/GcvT conserved site NJ56_09300 IPR023758 tRNA-modifying protein YgfZ NJ56_09300 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA NJ56_09300 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain NJ56_09305 IPR005631 Flavinator of succinate dehydrogenase NJ56_09305 IPR036714 NJ56_09305 NJ56_09310 IPR009883 Protein of unknown function DUF1434 NJ56_09315 IPR001226 Flavodoxin, conserved site NJ56_09315 IPR008254 Flavodoxin/nitric oxide synthase NJ56_09315 IPR010086 Flavodoxin, long chain NJ56_09315 IPR029039 Flavoprotein-like NJ56_09320 IPR002104 Integrase, catalytic NJ56_09320 IPR004107 Integrase, SAM-like, N-terminal NJ56_09320 IPR010998 Integrase, Lambda-type, N-terminal NJ56_09320 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_09320 IPR011932 Tyrosine recombinase XerD NJ56_09320 IPR013762 Integrase-like, catalytic core NJ56_09320 IPR023009 Tyrosine recombinase XerC/XerD NJ56_09325 IPR009094 Disulphide bond isomerase, DsbC, N-terminal NJ56_09325 IPR012336 Thioredoxin-like fold NJ56_09325 IPR017937 Thioredoxin, conserved site NJ56_09325 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal NJ56_09325 IPR036249 NJ56_09325 NJ56_09330 IPR001667 DDH domain NJ56_09330 IPR003156 DHHA1 domain NJ56_09330 IPR004610 Bacterial RecJ exonuclease NJ56_09330 IPR038763 NJ56_09330 NJ56_09340 IPR002313 Lysine-tRNA ligase, class II NJ56_09340 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) NJ56_09340 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type NJ56_09340 IPR012340 Nucleic acid-binding, OB-fold NJ56_09340 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal NJ56_09340 IPR034762 NJ56_09340 NJ56_09350 IPR003453 Permease domain NJ56_09350 IPR030802 NJ56_09350 NJ56_09355 IPR003439 ABC transporter-like NJ56_09355 IPR003593 AAA+ ATPase domain NJ56_09355 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_09360 IPR003399 Mammalian cell entry-related NJ56_09365 IPR005586 Protein of unknown function DUF330 NJ56_09370 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_09370 IPR036388 NJ56_09370 NJ56_09380 IPR001775 GspD/PilQ family NJ56_09380 IPR004845 Type II secretion system GspD, conserved site NJ56_09380 IPR004846 Type II/III secretion system NJ56_09380 IPR005644 NolW-like NJ56_09380 IPR013356 Type II secretion system GspD NJ56_09380 IPR038591 NJ56_09380 NJ56_09385 IPR001482 Type II secretion system protein E NJ56_09385 IPR003593 AAA+ ATPase domain NJ56_09385 IPR013369 Type II secretion system GspE NJ56_09385 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_09385 IPR037257 NJ56_09385 NJ56_09390 IPR001992 Type II secretion system conserved site NJ56_09390 IPR003004 GspF/PilC family NJ56_09390 IPR018076 Type II secretion system F domain NJ56_09395 IPR000983 Bacterial general secretion pathway protein G-type pilin NJ56_09395 IPR010054 General secretion pathway protein G NJ56_09395 IPR012902 Prokaryotic N-terminal methylation site NJ56_09395 IPR013545 Type II secretion system protein G NJ56_09405 IPR010052 Type II secretion system protein I NJ56_09405 IPR012902 Prokaryotic N-terminal methylation site NJ56_09410 IPR010055 Type II secretion system protein J NJ56_09410 IPR012902 Prokaryotic N-terminal methylation site NJ56_09415 IPR005628 General secretion pathway protein K NJ56_09415 IPR038072 NJ56_09415 NJ56_09420 IPR024230 GspL, cytoplasmic actin-ATPase-like domain NJ56_09425 IPR023229 Type II secretion system protein M, periplasmic domain NJ56_09430 IPR001867 Signal transduction response regulator, C-terminal NJ56_09430 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_09430 IPR036388 NJ56_09430 NJ56_09440 IPR001853 DSBA-like thioredoxin domain NJ56_09440 IPR036249 NJ56_09440 NJ56_09445 IPR001279 Beta-lactamase-like NJ56_09445 IPR036866 NJ56_09445 NJ56_09450 IPR000847 Transcription regulator HTH, LysR NJ56_09450 IPR005119 LysR, substrate-binding NJ56_09450 IPR036388 NJ56_09450 NJ56_09450 IPR036390 NJ56_09450 NJ56_09455 IPR000847 Transcription regulator HTH, LysR NJ56_09455 IPR005119 LysR, substrate-binding NJ56_09455 IPR036388 NJ56_09455 NJ56_09455 IPR036390 NJ56_09455 NJ56_09460 IPR000183 Ornithine/DAP/Arg decarboxylase NJ56_09460 IPR002986 Diaminopimelate decarboxylase, LysA NJ56_09460 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NJ56_09460 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal NJ56_09460 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal NJ56_09460 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site NJ56_09460 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site NJ56_09460 IPR029066 PLP-binding barrel NJ56_09465 IPR000843 Transcription regulator HTH, LacI NJ56_09465 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_09465 IPR028082 Periplasmic binding protein-like I NJ56_09470 IPR000873 AMP-dependent synthetase/ligase NJ56_09470 IPR002123 Phospholipid/glycerol acyltransferase NJ56_09470 IPR020845 AMP-binding, conserved site NJ56_09470 IPR023775 Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl synthetase Aas NJ56_09470 IPR025110 AMP-binding enzyme C-terminal domain NJ56_09475 IPR011701 Major facilitator superfamily NJ56_09475 IPR023727 Lysophospholipid transporter LplT NJ56_09475 IPR036259 NJ56_09475 NJ56_09480 IPR023210 NADP-dependent oxidoreductase domain NJ56_09480 IPR036812 NJ56_09480 NJ56_09485 IPR005496 Integral membrane protein TerC NJ56_09490 IPR004230 DNA mismatch repair protein MutH NJ56_09490 IPR011335 Restriction endonuclease type II-like NJ56_09490 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II NJ56_09490 IPR037057 NJ56_09490 NJ56_09500 IPR000086 NUDIX hydrolase domain NJ56_09500 IPR015797 NUDIX hydrolase domain-like NJ56_09500 IPR020084 NUDIX hydrolase, conserved site NJ56_09500 IPR020476 NUDIX hydrolase NJ56_09500 IPR022927 RNA pyrophosphohydrolase RppH NJ56_09505 IPR000121 PEP-utilising enzyme, C-terminal NJ56_09505 IPR003018 GAF domain NJ56_09505 IPR006318 Phosphoenolpyruvate-utilising enzyme NJ56_09505 IPR008279 PEP-utilising enzyme, mobile domain NJ56_09505 IPR008731 Phosphotransferase system, enzyme I N-terminal NJ56_09505 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain NJ56_09505 IPR018274 PEP-utilising enzyme, active site NJ56_09505 IPR023151 PEP-utilising enzyme, conserved site NJ56_09505 IPR029016 GAF domain-like NJ56_09505 IPR036618 NJ56_09505 NJ56_09505 IPR036637 NJ56_09505 NJ56_09510 IPR001640 Prolipoprotein diacylglyceryl transferase NJ56_09515 IPR000398 Thymidylate synthase NJ56_09515 IPR020940 Thymidylate synthase, active site NJ56_09515 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain NJ56_09515 IPR036926 NJ56_09515 NJ56_09525 IPR012902 Prokaryotic N-terminal methylation site NJ56_09530 IPR016419 Prepilin peptidase-dependent protein B, predicted NJ56_09535 IPR019652 Protein of unknown function DUF2509 NJ56_09540 IPR012902 Prokaryotic N-terminal methylation site NJ56_09540 IPR022204 Prepilin peptidase dependent protein C NJ56_09545 IPR006697 Exodeoxyribonuclease V, gamma subunit NJ56_09545 IPR011335 Restriction endonuclease type II-like NJ56_09545 IPR013986 DExx box DNA helicase domain NJ56_09545 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_09550 IPR001431 Peptidase M16, zinc-binding site NJ56_09550 IPR007863 Peptidase M16, C-terminal domain NJ56_09550 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like NJ56_09550 IPR011765 Peptidase M16, N-terminal NJ56_09550 IPR032632 NJ56_09550 NJ56_09555 IPR004586 Exodeoxyribonuclease V, beta subunit NJ56_09555 IPR011335 Restriction endonuclease type II-like NJ56_09555 IPR011604 Exonuclease, phage-type/RecB, C-terminal NJ56_09555 IPR014017 DNA helicase, UvrD-like, C-terminal NJ56_09555 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_09555 IPR034739 NJ56_09555 NJ56_09560 IPR006344 Exodeoxyribonuclease V, alpha subunit NJ56_09560 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_09560 IPR027785 UvrD-like helicase C-terminal domain NJ56_09565 IPR000182 GNAT domain NJ56_09565 IPR001048 Aspartate/glutamate/uridylate kinase NJ56_09565 IPR010167 Amino-acid N-acetyltransferase (ArgA) NJ56_09565 IPR016181 Acyl-CoA N-acyltransferase NJ56_09565 IPR036393 NJ56_09565 NJ56_09570 IPR002508 Cell wall hydrolase/autolysin, catalytic NJ56_09570 IPR021731 AMIN domain NJ56_09590 IPR005300 Lytic transglycosylase MltA NJ56_09590 IPR010611 3D domain NJ56_09590 IPR026044 Membrane-bound lytic murein transglycosylase A NJ56_09590 IPR036908 NJ56_09590 NJ56_09595 IPR000594 UBA/THIF-type NAD/FAD binding fold NJ56_09595 IPR035985 NJ56_09595 NJ56_09600 IPR003808 Fe-S metabolism associated domain, SufE-like NJ56_09600 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE NJ56_09605 IPR000192 Aminotransferase class V domain NJ56_09605 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_09605 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_09605 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_09605 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site NJ56_09605 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA NJ56_09610 IPR010305 Protein of unknown function DUF903 NJ56_09610 IPR010920 Like-Sm (LSM) domain NJ56_09615 IPR000847 Transcription regulator HTH, LysR NJ56_09615 IPR005119 LysR, substrate-binding NJ56_09615 IPR036388 NJ56_09615 NJ56_09615 IPR036390 NJ56_09615 NJ56_09620 IPR006696 Protein of unknown function DUF423 NJ56_09625 IPR002877 Ribosomal RNA methyltransferase FtsJ domain NJ56_09625 IPR011224 Ribosomal RNA large subunit methyltransferase M NJ56_09625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_09630 IPR002421 5'-3' exonuclease, N-terminal NJ56_09630 IPR008918 Helix-hairpin-helix motif, class 2 NJ56_09630 IPR020045 5'-3' exonuclease, C-terminal domain NJ56_09630 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal NJ56_09630 IPR022895 Flap endonuclease Xni NJ56_09630 IPR029060 PIN domain-like NJ56_09630 IPR036279 NJ56_09630 NJ56_09635 IPR021826 Protein of unknown function DUF3412 NJ56_09635 IPR027820 Domain of unknown function DUF4478 NJ56_09635 IPR031100 NJ56_09635 NJ56_09635 IPR037153 NJ56_09635 NJ56_09640 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 NJ56_09640 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal NJ56_09640 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF NJ56_09645 IPR009948 Syd NJ56_09645 IPR038228 NJ56_09645 NJ56_09650 IPR007384 Protein of unknown function UCP006257 NJ56_09650 IPR023376 YqcC-like domain NJ56_09650 IPR036814 NJ56_09650 NJ56_09655 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F NJ56_09655 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NJ56_09655 IPR020103 Pseudouridine synthase, catalytic domain NJ56_09660 IPR001094 Flavodoxin NJ56_09660 IPR008254 Flavodoxin/nitric oxide synthase NJ56_09660 IPR029039 Flavoprotein-like NJ56_09665 IPR020911 Uncharacterised protein family UPF0325 NJ56_09670 IPR001451 Bacterial transferase hexapeptide repeat NJ56_09670 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family NJ56_09670 IPR011004 Trimeric LpxA-like NJ56_09670 IPR018357 Hexapeptide transferase, conserved site NJ56_09670 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 NJ56_09670 IPR037133 NJ56_09670 NJ56_09675 IPR002912 ACT domain NJ56_09675 IPR002934 Nucleotidyl transferase domain NJ56_09675 IPR003607 HD/PDEase domain NJ56_09675 IPR006674 HD domain NJ56_09675 IPR010043 Protein-PII uridylyltransferase NJ56_09675 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase NJ56_09680 IPR000994 Peptidase M24, structural domain NJ56_09680 IPR001714 Peptidase M24, methionine aminopeptidase NJ56_09680 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 NJ56_09680 IPR036005 NJ56_09680 NJ56_09685 IPR001865 Ribosomal protein S2 NJ56_09685 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid NJ56_09685 IPR018130 Ribosomal protein S2, conserved site NJ56_09685 IPR023591 Ribosomal protein S2, flavodoxin-like domain NJ56_09690 IPR001816 Translation elongation factor EFTs/EF1B NJ56_09690 IPR009060 UBA-like NJ56_09690 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation NJ56_09690 IPR018101 Translation elongation factor Ts, conserved site NJ56_09690 IPR036402 NJ56_09690 NJ56_09695 IPR001048 Aspartate/glutamate/uridylate kinase NJ56_09695 IPR011817 Uridylate kinase NJ56_09695 IPR015963 Uridylate kinase, bacteria NJ56_09695 IPR036393 NJ56_09695 NJ56_09700 IPR002661 Ribosome recycling factor NJ56_09700 IPR023584 Ribosome recycling factor domain NJ56_09700 IPR036191 NJ56_09700 NJ56_09705 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase NJ56_09705 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal NJ56_09705 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal NJ56_09705 IPR026877 DXP reductoisomerase C-terminal domain NJ56_09705 IPR036169 NJ56_09705 NJ56_09705 IPR036291 NJ56_09705 NJ56_09710 IPR001441 Decaprenyl diphosphate synthase-like NJ56_09710 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site NJ56_09710 IPR036424 NJ56_09710 NJ56_09715 IPR000374 Phosphatidate cytidylyltransferase NJ56_09720 IPR001478 PDZ domain NJ56_09720 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase NJ56_09720 IPR008915 Peptidase M50 NJ56_09720 IPR036034 NJ56_09720 NJ56_09725 IPR000184 Bacterial surface antigen (D15) NJ56_09725 IPR010827 Surface antigen variable number NJ56_09725 IPR023707 Outer membrane protein assembly factor BamA NJ56_09730 IPR005632 Chaperone protein Skp NJ56_09730 IPR024930 Skp domain NJ56_09735 IPR001451 Bacterial transferase hexapeptide repeat NJ56_09735 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase NJ56_09735 IPR011004 Trimeric LpxA-like NJ56_09735 IPR018357 Hexapeptide transferase, conserved site NJ56_09735 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region NJ56_09740 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ NJ56_09740 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ NJ56_09740 IPR029069 HotDog domain NJ56_09745 IPR001451 Bacterial transferase hexapeptide repeat NJ56_09745 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase NJ56_09745 IPR011004 Trimeric LpxA-like NJ56_09745 IPR018357 Hexapeptide transferase, conserved site NJ56_09745 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal NJ56_09745 IPR037157 NJ56_09745 NJ56_09750 IPR003835 Glycosyl transferase, family 19 NJ56_09755 IPR012337 Ribonuclease H-like domain NJ56_09755 IPR022898 Ribonuclease HII NJ56_09755 IPR024567 Ribonuclease HII/HIII domain NJ56_09755 IPR036397 NJ56_09755 NJ56_09760 IPR003141 Polymerase/histidinol phosphatase, N-terminal NJ56_09760 IPR004013 PHP, C-terminal NJ56_09760 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type NJ56_09760 IPR004805 DNA polymerase III, alpha subunit NJ56_09760 IPR011708 Bacterial DNA polymerase III, alpha subunit NJ56_09760 IPR016195 Polymerase/histidinol phosphatase-like NJ56_09760 IPR029460 DNA polymerase, helix-hairpin-helix motif NJ56_09765 IPR001095 Acetyl-CoA carboxylase, alpha subunit NJ56_09765 IPR029045 ClpP/crotonase-like domain NJ56_09775 IPR003898 Bordetella pertussis toxin A NJ56_09785 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NJ56_09785 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NJ56_09790 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase NJ56_09790 IPR012094 Lysidine-tRNA(Ile) synthetase NJ56_09790 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal NJ56_09790 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal NJ56_09790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_09790 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain NJ56_09795 IPR009056 Cytochrome c-like domain NJ56_09795 IPR036909 NJ56_09795 NJ56_09800 IPR009778 Modulator of Rho-dependent transcription termination NJ56_09800 IPR023534 Rof/RNase P-like NJ56_09800 IPR038626 NJ56_09800 NJ56_09805 IPR009624 Uncharacterised protein family UPF0253 NJ56_09810 IPR009822 YaeQ NJ56_09810 IPR011335 Restriction endonuclease type II-like NJ56_09810 IPR038590 NJ56_09810 NJ56_09815 IPR000352 Peptide chain release factor class I/class II NJ56_09820 IPR007298 Copper resistance lipoprotein NlpE NJ56_09820 IPR033450 NJ56_09820 NJ56_09820 IPR038139 NJ56_09820 NJ56_09825 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain NJ56_09825 IPR002316 Proline-tRNA ligase, class IIa NJ56_09825 IPR004154 Anticodon-binding NJ56_09825 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type NJ56_09825 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain NJ56_09825 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 NJ56_09825 IPR036621 NJ56_09825 NJ56_09825 IPR036754 NJ56_09825 NJ56_09830 IPR023368 Uncharacterised protein family UPF0066, conserved site NJ56_09830 IPR023370 TsaA-like domain NJ56_09830 IPR036413 NJ56_09830 NJ56_09830 IPR036414 NJ56_09830 NJ56_09835 IPR030852 NJ56_09835 NJ56_09840 IPR004872 Lipoprotein NlpA family NJ56_09845 IPR000515 MetI-like domain NJ56_09845 IPR035906 NJ56_09845 NJ56_09850 IPR003439 ABC transporter-like NJ56_09850 IPR003593 AAA+ ATPase domain NJ56_09850 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria NJ56_09850 IPR017871 ABC transporter, conserved site NJ56_09850 IPR018449 NIL domain NJ56_09850 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_09855 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase NJ56_09855 IPR006543 Histidinol-phosphate phosphatase NJ56_09855 IPR006549 HAD-superfamily hydrolase,subfamily IIIA NJ56_09855 IPR023214 HAD-like domain NJ56_09855 IPR036412 NJ56_09855 NJ56_09880 IPR017028 Uncharacterised conserved protein UCP034456 NJ56_09880 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein NJ56_09885 IPR001736 Phospholipase D/Transphosphatidylase NJ56_09885 IPR025202 Phospholipase D-like domain NJ56_09890 IPR000182 GNAT domain NJ56_09890 IPR003781 CoA-binding NJ56_09890 IPR013815 ATP-grasp fold, subdomain 1 NJ56_09890 IPR016102 Succinyl-CoA synthetase-like NJ56_09890 IPR016181 Acyl-CoA N-acyltransferase NJ56_09890 IPR032875 NJ56_09890 NJ56_09890 IPR036291 NJ56_09890 NJ56_09895 IPR005636 DTW NJ56_09900 IPR005746 Thioredoxin NJ56_09900 IPR013766 Thioredoxin domain NJ56_09900 IPR017937 Thioredoxin, conserved site NJ56_09900 IPR036249 NJ56_09900 NJ56_09905 IPR001537 tRNA/rRNA methyltransferase, SpoU type NJ56_09905 IPR013123 RNA 2-O ribose methyltransferase, substrate binding NJ56_09905 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted NJ56_09905 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NJ56_09905 IPR029028 Alpha/beta knot methyltransferases NJ56_09905 IPR029064 50S ribosomal protein L30e-like NJ56_09910 IPR004638 Drug resistance transporter EmrB/QacA subfamily NJ56_09910 IPR011701 Major facilitator superfamily NJ56_09910 IPR036259 NJ56_09910 NJ56_09915 IPR005694 Efflux pump membrane protein Emr NJ56_09915 IPR006143 RND efflux pump, membrane fusion protein NJ56_09915 IPR032317 NJ56_09915 NJ56_09925 IPR000835 MarR-type HTH domain NJ56_09925 IPR023187 Transcriptional regulator MarR-type, conserved site NJ56_09925 IPR036388 NJ56_09925 NJ56_09925 IPR036390 NJ56_09925 NJ56_09930 IPR011701 Major facilitator superfamily NJ56_09930 IPR036259 NJ56_09930 NJ56_09940 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain NJ56_09945 IPR000515 MetI-like domain NJ56_09945 IPR035906 NJ56_09945 NJ56_09950 IPR000644 CBS domain NJ56_09950 IPR003439 ABC transporter-like NJ56_09950 IPR003593 AAA+ ATPase domain NJ56_09950 IPR005892 Glycine betaine transport ATP-binding subunit NJ56_09950 IPR017871 ABC transporter, conserved site NJ56_09950 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_09955 IPR000358 Ribonucleotide reductase small subunit NJ56_09955 IPR009078 Ferritin-like superfamily NJ56_09955 IPR012348 Ribonucleotide reductase-related NJ56_09955 IPR026494 Ribonucleoside reductase subunit beta, NrdF NJ56_09955 IPR030475 NJ56_09955 NJ56_09960 IPR000788 Ribonucleotide reductase large subunit, C-terminal NJ56_09960 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal NJ56_09960 IPR013346 Ribonucleotide reductase, class I , alpha subunit NJ56_09960 IPR013509 Ribonucleotide reductase large subunit, N-terminal NJ56_09960 IPR013554 Ribonucleotide reductase N-terminal NJ56_09960 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE NJ56_09965 IPR004465 Ribonucleotide reductase Class Ib, NrdI NJ56_09965 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial NJ56_09965 IPR029039 Flavoprotein-like NJ56_09970 IPR002109 Glutaredoxin NJ56_09970 IPR011909 Glutaredoxin-like protein NrdH NJ56_09970 IPR036249 NJ56_09970 NJ56_09975 IPR023497 Acid shock protein NJ56_09980 IPR018994 Protein of unknown function DUF2002 NJ56_09985 IPR009587 Protein of unknown function DUF1198 NJ56_09990 IPR006983 MbeD/MobD-like NJ56_09995 IPR002059 Cold-shock protein, DNA-binding NJ56_09995 IPR011129 Cold shock protein NJ56_09995 IPR012156 Cold shock, CspA NJ56_09995 IPR012340 Nucleic acid-binding, OB-fold NJ56_09995 IPR019844 Cold-shock conserved site NJ56_10000 IPR006231 Malate:quinone-oxidoreductase NJ56_10000 IPR036188 NJ56_10000 NJ56_10005 IPR000262 FMN-dependent dehydrogenase NJ56_10005 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site NJ56_10005 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent NJ56_10005 IPR013785 Aldolase-type TIM barrel NJ56_10005 IPR020920 L-lactate dehydrogenase, bacterial NJ56_10010 IPR003804 L-lactate permease NJ56_10015 IPR000847 Transcription regulator HTH, LysR NJ56_10015 IPR005119 LysR, substrate-binding NJ56_10015 IPR036388 NJ56_10015 NJ56_10015 IPR036390 NJ56_10015 NJ56_10020 IPR022742 Putative lysophospholipase NJ56_10020 IPR029058 Alpha/Beta hydrolase fold NJ56_10025 IPR025997 Periplasmic binding protein domain NJ56_10025 IPR028082 Periplasmic binding protein-like I NJ56_10030 IPR003439 ABC transporter-like NJ56_10030 IPR003593 AAA+ ATPase domain NJ56_10030 IPR017871 ABC transporter, conserved site NJ56_10030 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10035 IPR001851 ABC transporter, permease NJ56_10040 IPR001851 ABC transporter, permease NJ56_10045 IPR000577 NJ56_10045 NJ56_10045 IPR006003 Carbohydrate kinase, FGGY-related NJ56_10045 IPR018484 Carbohydrate kinase, FGGY, N-terminal NJ56_10045 IPR018485 Carbohydrate kinase, FGGY, C-terminal NJ56_10050 IPR001347 Sugar isomerase (SIS) NJ56_10075 IPR022385 Rhs repeat-associated core NJ56_10080 IPR003284 Salmonella virulence plasmid 65kDa B protein NJ56_10080 IPR022044 Insecticide toxin TcdB middle/C-terminal NJ56_10080 IPR022045 Insecticide toxin TcdB middle/N-terminal NJ56_10090 IPR018003 Insecticidal toxin complex/plasmid virulence protein NJ56_10095 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal NJ56_10095 IPR029283 Calcium-dependent cell adhesion molecule 1, membrane-binding domain NJ56_10095 IPR038423 NJ56_10095 NJ56_10100 IPR001584 Integrase, catalytic core NJ56_10100 IPR002514 Transposase IS3/IS911family NJ56_10100 IPR009057 Homeodomain-like NJ56_10100 IPR012337 Ribonuclease H-like domain NJ56_10100 IPR036397 NJ56_10100 NJ56_10120 IPR000847 Transcription regulator HTH, LysR NJ56_10120 IPR005119 LysR, substrate-binding NJ56_10120 IPR036388 NJ56_10120 NJ56_10120 IPR036390 NJ56_10120 NJ56_10140 IPR000259 Fimbrial-type adhesion domain NJ56_10140 IPR008966 Adhesion domain NJ56_10140 IPR036937 NJ56_10140 NJ56_10145 IPR000015 Outer membrane usher protein NJ56_10145 IPR018030 Fimbrial membrane usher, conserved site NJ56_10145 IPR025885 PapC, N-terminal domain NJ56_10145 IPR025949 PapC-like, C-terminal domain NJ56_10145 IPR037224 NJ56_10145 NJ56_10150 IPR001829 Pili assembly chaperone, bacterial NJ56_10150 IPR008962 PapD-like NJ56_10150 IPR013783 Immunoglobulin-like fold NJ56_10150 IPR016147 PapD, N-terminal, bacterial NJ56_10150 IPR016148 Pili assembly chaperone, C-terminal domain NJ56_10150 IPR036316 NJ56_10150 NJ56_10180 IPR007111 NACHT nucleoside triphosphatase NJ56_10200 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal NJ56_10200 IPR006171 Toprim domain NJ56_10200 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal NJ56_10200 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal NJ56_10200 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10200 IPR036388 NJ56_10200 NJ56_10200 IPR036390 NJ56_10200 NJ56_10205 IPR035317 NJ56_10205 NJ56_10215 IPR018880 Bacteriophage P4, Ash protein NJ56_10225 IPR010260 Bacteriophage P4, Orf88 NJ56_10235 IPR007684 Zinc finger, Ogr/Delta-type NJ56_10240 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10245 IPR002104 Integrase, catalytic NJ56_10245 IPR010998 Integrase, Lambda-type, N-terminal NJ56_10245 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_10245 IPR013762 Integrase-like, catalytic core NJ56_10245 IPR025166 Domain of unknown function DUF4102 NJ56_10245 IPR038488 NJ56_10245 NJ56_10255 IPR000037 SsrA-binding protein NJ56_10255 IPR020081 SsrA-binding protein, conserved site NJ56_10255 IPR023620 Small protein B NJ56_10260 IPR005031 Streptomyces cyclase/dehydrase NJ56_10260 IPR023393 START-like domain NJ56_10265 IPR005346 RnfH protein NJ56_10265 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NJ56_10265 IPR037021 NJ56_10265 NJ56_10270 IPR007450 Lipoprotein SmpA/OmlA NJ56_10270 IPR026592 Outer membrane protein assembly factor BamE NJ56_10270 IPR037873 NJ56_10270 NJ56_10275 IPR003395 RecF/RecN/SMC, N-terminal NJ56_10275 IPR004604 DNA recombination/repair protein RecN NJ56_10275 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10280 IPR002504 Inorganic polyphosphate/ATP-NAD kinase NJ56_10280 IPR016064 ATP-NAD kinase-like domain NJ56_10280 IPR017437 ATP-NAD kinase, PpnK-type, all-beta NJ56_10280 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 NJ56_10290 IPR000740 GrpE nucleotide exchange factor NJ56_10290 IPR009012 GrpE nucleotide exchange factor, head NJ56_10290 IPR013805 GrpE nucleotide exchange factor, coiled-coil NJ56_10295 IPR002043 Uracil-DNA glycosylase NJ56_10295 IPR005122 Uracil-DNA glycosylase-like NJ56_10295 IPR018085 Uracil-DNA glycosylase, active site NJ56_10295 IPR036895 NJ56_10295 NJ56_10300 IPR001150 Glycine radical domain NJ56_10300 IPR011140 Autonomous glycyl radical cofactor GrcA NJ56_10300 IPR019777 Formate C-acetyltransferase glycine radical, conserved site NJ56_10305 IPR024499 Protein of unknown function DUF2974 NJ56_10305 IPR029058 Alpha/Beta hydrolase fold NJ56_10310 IPR002110 Ankyrin repeat NJ56_10310 IPR020683 Ankyrin repeat-containing domain NJ56_10310 IPR036770 NJ56_10310 NJ56_10315 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site NJ56_10315 IPR001650 Helicase, C-terminal NJ56_10315 IPR011545 DEAD/DEAH box helicase domain NJ56_10315 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_10315 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10315 IPR028621 ATP-dependent RNA helicase SrmB NJ56_10320 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_10320 IPR007848 Methyltransferase small domain NJ56_10320 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase NJ56_10320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_10325 IPR003953 FAD binding domain NJ56_10325 IPR005288 L-aspartate oxidase NJ56_10325 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal NJ56_10325 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NJ56_10325 IPR036188 NJ56_10325 NJ56_10325 IPR037099 NJ56_10325 NJ56_10330 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site NJ56_10330 IPR007627 RNA polymerase sigma-70 region 2 NJ56_10330 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 NJ56_10330 IPR013324 RNA polymerase sigma factor, region 3/4 NJ56_10330 IPR013325 RNA polymerase sigma factor, region 2 NJ56_10330 IPR014284 RNA polymerase sigma-70 like domain NJ56_10330 IPR014286 RNA polymerase sigma-70 RpoE type NJ56_10330 IPR036388 NJ56_10330 NJ56_10335 IPR005572 Anti sigma-E protein RseA, N-terminal NJ56_10335 IPR005573 Anti sigma-E protein RseA, C-terminal NJ56_10335 IPR026279 Sigma-E factor negative regulatory protein RseA NJ56_10335 IPR036147 NJ56_10335 NJ56_10340 IPR005588 MucB/RseB NJ56_10340 IPR033434 NJ56_10340 NJ56_10340 IPR033436 NJ56_10340 NJ56_10340 IPR038484 NJ56_10340 NJ56_10345 IPR026268 Protein RseC NJ56_10350 IPR000640 Translation elongation factor EFG, V domain NJ56_10350 IPR000795 Elongation factor, GTP-binding domain NJ56_10350 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 NJ56_10350 IPR005225 Small GTP-binding protein domain NJ56_10350 IPR006297 Elongation factor 4 NJ56_10350 IPR013842 GTP-binding protein LepA, C-terminal NJ56_10350 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10350 IPR031157 NJ56_10350 NJ56_10350 IPR035647 NJ56_10350 NJ56_10350 IPR038363 NJ56_10350 NJ56_10355 IPR000223 Peptidase S26A, signal peptidase I NJ56_10355 IPR015927 Peptidase S24/S26A/S26B/S26C NJ56_10355 IPR019533 Peptidase S26 NJ56_10355 IPR019757 Peptidase S26A, signal peptidase I, lysine active site NJ56_10355 IPR019758 Peptidase S26A, signal peptidase I, conserved site NJ56_10355 IPR036286 NJ56_10355 NJ56_10360 IPR000999 Ribonuclease III domain NJ56_10360 IPR011907 Ribonuclease III NJ56_10360 IPR014720 Double-stranded RNA-binding domain NJ56_10360 IPR036389 NJ56_10360 NJ56_10365 IPR004044 K Homology domain, type 2 NJ56_10365 IPR005225 Small GTP-binding protein domain NJ56_10365 IPR005662 GTP-binding protein Era NJ56_10365 IPR006073 GTP binding domain NJ56_10365 IPR009019 K homology domain, prokaryotic type NJ56_10365 IPR015946 K homology domain-like, alpha/beta NJ56_10365 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10370 IPR003717 Recombination protein O, RecO NJ56_10370 IPR012340 Nucleic acid-binding, OB-fold NJ56_10370 IPR022572 DNA replication/recombination mediator RecO, N-terminal NJ56_10370 IPR037278 NJ56_10370 NJ56_10375 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ NJ56_10375 IPR013785 Aldolase-type TIM barrel NJ56_10375 IPR036130 NJ56_10375 NJ56_10380 IPR002582 Holo-[acyl carrier protein] synthase NJ56_10380 IPR004568 Phosphopantethiene-protein transferase domain NJ56_10380 IPR008278 4'-phosphopantetheinyl transferase superfamily NJ56_10380 IPR037143 NJ56_10380 NJ56_10385 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_10385 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_10390 IPR000281 Helix-turn-helix protein RpiR NJ56_10390 IPR001347 Sugar isomerase (SIS) NJ56_10390 IPR009057 Homeodomain-like NJ56_10390 IPR036388 NJ56_10390 NJ56_10395 IPR001347 Sugar isomerase (SIS) NJ56_10395 IPR005486 Glucokinase regulatory protein, conserved site NJ56_10395 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ NJ56_10400 IPR003352 Phosphotransferase system, EIIC NJ56_10400 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site NJ56_10400 IPR036878 NJ56_10400 NJ56_10405 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB NJ56_10405 IPR023214 HAD-like domain NJ56_10405 IPR036412 NJ56_10405 NJ56_10410 IPR016192 APOBEC/CMP deaminase, zinc-binding NJ56_10410 IPR016193 Cytidine deaminase-like NJ56_10410 IPR028883 tRNA-specific adenosine deaminase NJ56_10415 IPR000189 Prokaryotic transglycosylase, active site NJ56_10415 IPR001638 Extracellular solute-binding protein, family 3 NJ56_10415 IPR008258 Lytic transglycosylase-like SLT domain NJ56_10415 IPR023346 Lysozyme-like domain NJ56_10415 IPR023703 Membrane-bound lytic murein transglycosylase F NJ56_10420 IPR010073 Phosphoribosylformylglycinamidine synthase NJ56_10420 IPR010918 AIR synthase-related protein, C-terminal domain NJ56_10420 IPR029062 Class I glutamine amidotransferase-like NJ56_10420 IPR036604 NJ56_10420 NJ56_10420 IPR036676 NJ56_10420 NJ56_10420 IPR036921 NJ56_10420 NJ56_10435 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_10435 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_10435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_10435 IPR036097 NJ56_10435 NJ56_10435 IPR036890 NJ56_10435 NJ56_10440 IPR025262 Quorum-sensing regulator protein G NJ56_10445 IPR001789 Signal transduction response regulator, receiver domain NJ56_10445 IPR002078 RNA polymerase sigma factor 54 interaction domain NJ56_10445 IPR003593 AAA+ ATPase domain NJ56_10445 IPR009057 Homeodomain-like NJ56_10445 IPR011006 CheY-like superfamily NJ56_10445 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NJ56_10445 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NJ56_10445 IPR025944 Sigma-54 interaction domain, conserved site NJ56_10445 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10450 IPR000132 Nitrilase/cyanide hydratase, conserved site NJ56_10450 IPR003010 Carbon-nitrogen hydrolase NJ56_10450 IPR003694 NAD(+) synthetase NJ56_10450 IPR014445 Glutamine-dependent NAD(+) synthetase NJ56_10450 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_10450 IPR022310 NAD/GMP synthase NJ56_10450 IPR036526 NJ56_10450 NJ56_10455 IPR002187 Nitrogen regulatory protein PII NJ56_10455 IPR002332 Nitrogen regulatory protein P-II, urydylation site NJ56_10455 IPR011322 Nitrogen regulatory PII-like, alpha/beta NJ56_10455 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NJ56_10455 IPR017918 Nitrogen regulatory protein PII, conserved site NJ56_10460 IPR019733 Uncharacterised protein family YhfT NJ56_10465 IPR021238 Protein of unknown function DUF2620 NJ56_10470 IPR001559 Aryldialkylphosphatase NJ56_10470 IPR032466 NJ56_10470 NJ56_10475 IPR001608 Alanine racemase, N-terminal NJ56_10475 IPR029066 PLP-binding barrel NJ56_10480 IPR036634 NJ56_10480 NJ56_10485 IPR032791 NJ56_10485 NJ56_10485 IPR036388 NJ56_10485 NJ56_10485 IPR036390 NJ56_10485 NJ56_10490 IPR000971 Globin NJ56_10490 IPR001221 Phenol hydroxylase reductase NJ56_10490 IPR001433 Oxidoreductase FAD/NAD(P)-binding NJ56_10490 IPR008333 Oxidoreductase, FAD-binding domain NJ56_10490 IPR009050 Globin-like NJ56_10490 IPR012292 Globin, structural domain NJ56_10490 IPR017938 Riboflavin synthase-like beta-barrel NJ56_10490 IPR023950 Flavohemoprotein NJ56_10490 IPR039261 NJ56_10490 NJ56_10495 IPR001085 Serine hydroxymethyltransferase NJ56_10495 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_10495 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_10495 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_10495 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site NJ56_10495 IPR039429 NJ56_10495 NJ56_10500 IPR024989 Major facilitator superfamily associated domain NJ56_10500 IPR026032 Phenylproprionate/maltose permease NJ56_10500 IPR036259 NJ56_10500 NJ56_10505 IPR011608 PRD domain NJ56_10505 IPR036634 NJ56_10505 NJ56_10510 IPR010412 Protein of unknown function DUF1007 NJ56_10510 IPR016537 Uncharacterised conserved protein UCP008159, NJ56_10515 IPR011541 Nickel/cobalt transporter, high-affinity NJ56_10520 IPR000760 Inositol monophosphatase NJ56_10520 IPR020550 Inositol monophosphatase, conserved site NJ56_10520 IPR020583 Inositol monophosphatase, metal-binding site NJ56_10520 IPR022337 Inositol monophosphatase, SuhB NJ56_10525 IPR001537 tRNA/rRNA methyltransferase, SpoU type NJ56_10525 IPR004384 RNA methyltransferase TrmH, group 1 NJ56_10525 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NJ56_10525 IPR029028 Alpha/beta knot methyltransferases NJ56_10530 IPR000944 Transcription regulator Rrf2-like NJ56_10530 IPR010242 Transcription factor HTH, IscR NJ56_10530 IPR030489 NJ56_10530 NJ56_10530 IPR036388 NJ56_10530 NJ56_10530 IPR036390 NJ56_10530 NJ56_10535 IPR000192 Aminotransferase class V domain NJ56_10535 IPR010240 Cysteine desulfurase NJ56_10535 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_10535 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_10535 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_10535 IPR016454 Cysteine desulfurase, NifS NJ56_10535 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site NJ56_10540 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal NJ56_10540 IPR011339 ISC system FeS cluster assembly, IscU scaffold NJ56_10545 IPR000361 FeS cluster biogenesis NJ56_10545 IPR011302 ISC system FeS cluster assembly, IscA scaffold NJ56_10545 IPR016092 FeS cluster insertion protein NJ56_10545 IPR017870 FeS cluster insertion, C-terminal, conserved site NJ56_10545 IPR035903 NJ56_10545 NJ56_10550 IPR001623 DnaJ domain NJ56_10550 IPR004640 Co-chaperone Hsc20 NJ56_10550 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain NJ56_10550 IPR036386 NJ56_10550 NJ56_10550 IPR036869 NJ56_10550 NJ56_10555 IPR010236 ISC system FeS cluster assembly, HscA chaperone NJ56_10555 IPR013126 Heat shock protein 70 family NJ56_10555 IPR018181 Heat shock protein 70, conserved site NJ56_10555 IPR029047 Heat shock protein 70kD, peptide-binding domain NJ56_10555 IPR029048 Heat shock protein 70kD, C-terminal domain NJ56_10560 IPR001041 2Fe-2S ferredoxin-type domain NJ56_10560 IPR001055 Adrenodoxin NJ56_10560 IPR011536 Ferredoxin, 2Fe-2S type NJ56_10560 IPR012675 Beta-grasp domain NJ56_10560 IPR018298 Adrenodoxin, iron-sulphur binding site NJ56_10560 IPR036010 NJ56_10560 NJ56_10565 IPR007479 ISC system FeS cluster assembly, IscX NJ56_10565 IPR036762 NJ56_10565 NJ56_10570 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal NJ56_10570 IPR008330 Peptidase M17, peptidase B NJ56_10570 IPR011356 Leucine aminopeptidase/peptidase B NJ56_10575 IPR009839 SseB protein N-terminal domain NJ56_10575 IPR027945 SseB protein, C-terminal NJ56_10580 IPR001599 Alpha-2-macroglobulin NJ56_10580 IPR002890 Alpha-2-macroglobulin, N-terminal NJ56_10580 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NJ56_10580 IPR011625 Alpha-2-macroglobulin, N-terminal 2 NJ56_10580 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming NJ56_10580 IPR026284 Alpha-2-macroglobulin domain protein, bacteria NJ56_10585 IPR001264 Glycosyl transferase, family 51 NJ56_10585 IPR001460 Penicillin-binding protein, transpeptidase NJ56_10585 IPR009647 Penicillin-binding, C-terminal NJ56_10585 IPR011815 Penicillin-binding protein 1C NJ56_10585 IPR012338 Beta-lactamase/transpeptidase-like NJ56_10585 IPR023346 Lysozyme-like domain NJ56_10585 IPR036950 NJ56_10585 NJ56_10590 IPR011024 Gamma-crystallin-related NJ56_10595 IPR001564 Nucleoside diphosphate kinase NJ56_10595 IPR023005 Nucleoside diphosphate kinase, active site NJ56_10595 IPR034907 NJ56_10595 NJ56_10595 IPR036850 NJ56_10595 NJ56_10600 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr NJ56_10600 IPR007197 Radical SAM NJ56_10600 IPR013785 Aldolase-type TIM barrel NJ56_10600 IPR027492 Dual-specificity RNA methyltransferase RlmN NJ56_10605 IPR011990 Tetratricopeptide-like helical domain NJ56_10605 IPR013360 Pilus biogenesis/stability type IV, PilW NJ56_10605 IPR019734 Tetratricopeptide repeat NJ56_10610 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_10610 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_10610 IPR025194 Domain of unknown function DUF4115 NJ56_10615 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type NJ56_10615 IPR011005 Dihydropteroate synthase-like NJ56_10615 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial NJ56_10620 IPR004154 Anticodon-binding NJ56_10620 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit NJ56_10620 IPR015807 Histidine-tRNA ligase NJ56_10620 IPR036621 NJ56_10620 NJ56_10625 IPR011990 Tetratricopeptide-like helical domain NJ56_10625 IPR018704 Domain of unknown function DUF09976 NJ56_10625 IPR026039 Uncharacterised protein family UPF0070 NJ56_10630 IPR002372 Pyrrolo-quinoline quinone repeat NJ56_10630 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily NJ56_10630 IPR015943 WD40/YVTN repeat-like-containing domain NJ56_10630 IPR017687 Outer membrane protein assembly factor BamB NJ56_10630 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NJ56_10635 IPR005225 Small GTP-binding protein domain NJ56_10635 IPR006073 GTP binding domain NJ56_10635 IPR015946 K homology domain-like, alpha/beta NJ56_10635 IPR016484 GTP-binding protein EngA NJ56_10635 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10635 IPR032859 NJ56_10635 NJ56_10640 IPR010807 Protein of unknown function DUF1407 NJ56_10640 IPR029037 YfgJ-like NJ56_10645 IPR003753 Exonuclease VII, large subunit NJ56_10645 IPR020579 Exonuclease VII, large subunit, C-terminal NJ56_10645 IPR025824 OB-fold nucleic acid binding domain NJ56_10650 IPR000644 CBS domain NJ56_10650 IPR001093 IMP dehydrogenase/GMP reductase NJ56_10650 IPR005990 Inosine-5'-monophosphate dehydrogenase NJ56_10650 IPR013785 Aldolase-type TIM barrel NJ56_10650 IPR015875 IMP dehydrogenase / GMP reductase, conserved site NJ56_10655 IPR001674 GMP synthase, C-terminal NJ56_10655 IPR004739 GMP synthase, N-terminal NJ56_10655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_10655 IPR017926 Glutamine amidotransferase NJ56_10655 IPR022310 NAD/GMP synthase NJ56_10655 IPR022955 GMP synthase NJ56_10655 IPR029062 Class I glutamine amidotransferase-like NJ56_10660 IPR001064 Beta/gamma crystallin NJ56_10660 IPR011024 Gamma-crystallin-related NJ56_10675 IPR026870 Zinc-ribbon domain NJ56_10690 IPR022037 Protein of unknown function DUF3606 NJ56_10695 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase NJ56_10695 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase NJ56_10695 IPR029056 Ribokinase-like NJ56_10705 IPR014453 Inhibitor of vertebrate lysozyme NJ56_10705 IPR036501 NJ56_10705 NJ56_10710 IPR001206 Diacylglycerol kinase, catalytic domain NJ56_10710 IPR005218 Diacylglycerol/lipid kinase NJ56_10710 IPR016064 ATP-NAD kinase-like domain NJ56_10710 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 NJ56_10710 IPR022433 Lipid kinase YegS NJ56_10715 IPR001539 Peptidase U32 NJ56_10715 IPR032525 NJ56_10715 NJ56_10720 IPR010879 Domain of unknown function DUF1508 NJ56_10720 IPR036913 NJ56_10720 NJ56_10725 IPR001789 Signal transduction response regulator, receiver domain NJ56_10725 IPR001867 Signal transduction response regulator, C-terminal NJ56_10725 IPR011006 CheY-like superfamily NJ56_10725 IPR036388 NJ56_10725 NJ56_10730 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_10730 IPR003660 HAMP linker domain NJ56_10730 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_10730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_10730 IPR036097 NJ56_10730 NJ56_10730 IPR036890 NJ56_10730 NJ56_10735 IPR004638 Drug resistance transporter EmrB/QacA subfamily NJ56_10735 IPR011701 Major facilitator superfamily NJ56_10735 IPR023721 Multidrug resistance protein MdtD, putative NJ56_10735 IPR036259 NJ56_10735 NJ56_10740 IPR001036 Acriflavin resistance protein NJ56_10740 IPR023931 Multidrug resistance protein MdtC NJ56_10740 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NJ56_10745 IPR001036 Acriflavin resistance protein NJ56_10745 IPR022831 Multidrug resistance protein MdtB NJ56_10745 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NJ56_10750 IPR006143 RND efflux pump, membrane fusion protein NJ56_10750 IPR022824 Multidrug resistance protein MdtA NJ56_10750 IPR039562 NJ56_10750 NJ56_10755 IPR000259 Fimbrial-type adhesion domain NJ56_10755 IPR008966 Adhesion domain NJ56_10755 IPR036937 NJ56_10755 NJ56_10760 IPR000259 Fimbrial-type adhesion domain NJ56_10760 IPR008966 Adhesion domain NJ56_10760 IPR036937 NJ56_10760 NJ56_10765 IPR000259 Fimbrial-type adhesion domain NJ56_10765 IPR008966 Adhesion domain NJ56_10765 IPR036937 NJ56_10765 NJ56_10770 IPR000015 Outer membrane usher protein NJ56_10770 IPR018030 Fimbrial membrane usher, conserved site NJ56_10770 IPR025885 PapC, N-terminal domain NJ56_10770 IPR025949 PapC-like, C-terminal domain NJ56_10770 IPR037224 NJ56_10770 NJ56_10775 IPR001829 Pili assembly chaperone, bacterial NJ56_10775 IPR008962 PapD-like NJ56_10775 IPR013783 Immunoglobulin-like fold NJ56_10775 IPR016147 PapD, N-terminal, bacterial NJ56_10775 IPR016148 Pili assembly chaperone, C-terminal domain NJ56_10775 IPR018046 Pili assembly chaperone, conserved site NJ56_10775 IPR036316 NJ56_10775 NJ56_10780 IPR008966 Adhesion domain NJ56_10780 IPR036937 NJ56_10780 NJ56_10785 IPR013126 Heat shock protein 70 family NJ56_10785 IPR018181 Heat shock protein 70, conserved site NJ56_10790 IPR000644 CBS domain NJ56_10790 IPR006667 SLC41 divalent cation transporters, integral membrane domain NJ56_10790 IPR006668 Magnesium transporter, MgtE intracellular domain NJ56_10790 IPR006669 Magnesium transporter MgtE NJ56_10790 IPR036739 NJ56_10790 NJ56_10790 IPR038048 NJ56_10790 NJ56_10790 IPR038076 NJ56_10790 NJ56_10795 IPR022576 Protein of unknown function DUF2633 NJ56_10800 IPR003695 Ppx/GppA phosphatase NJ56_10800 IPR022371 Exopolyphosphatase NJ56_10800 IPR030673 NJ56_10800 NJ56_10805 IPR003414 Polyphosphate kinase NJ56_10805 IPR024953 Polyphosphate kinase middle domain NJ56_10805 IPR025198 Polyphosphate kinase N-terminal domain NJ56_10805 IPR025200 Polyphosphate kinase C-terminal domain NJ56_10805 IPR036830 NJ56_10805 NJ56_10805 IPR036832 NJ56_10805 NJ56_10810 IPR000515 MetI-like domain NJ56_10810 IPR015943 WD40/YVTN repeat-like-containing domain NJ56_10810 IPR035906 NJ56_10810 NJ56_10815 IPR000515 MetI-like domain NJ56_10815 IPR005672 Phosphate transport system permease protein PstA NJ56_10815 IPR035906 NJ56_10815 NJ56_10820 IPR003439 ABC transporter-like NJ56_10820 IPR003593 AAA+ ATPase domain NJ56_10820 IPR005670 Phosphate transport system permease protein 1 NJ56_10820 IPR017871 ABC transporter, conserved site NJ56_10820 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10825 IPR000182 GNAT domain NJ56_10825 IPR016181 Acyl-CoA N-acyltransferase NJ56_10830 IPR001555 Phosphoribosylglycinamide formyltransferase, active site NJ56_10830 IPR002376 Formyl transferase, N-terminal NJ56_10830 IPR004607 Phosphoribosylglycinamide formyltransferase NJ56_10830 IPR036477 NJ56_10830 NJ56_10840 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase NJ56_10840 IPR010918 AIR synthase-related protein, C-terminal domain NJ56_10840 IPR016188 PurM, N-terminal-like NJ56_10840 IPR036676 NJ56_10840 NJ56_10840 IPR036921 NJ56_10840 NJ56_10850 IPR005765 Uracil phosphoribosyl transferase NJ56_10850 IPR029057 Phosphoribosyltransferase-like NJ56_10850 IPR034332 NJ56_10850 NJ56_10855 IPR006042 Xanthine/uracil permease NJ56_10855 IPR006043 Xanthine/uracil/vitamin C permease NJ56_10860 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) NJ56_10860 IPR017788 DnaA regulatory inactivator Hda NJ56_10860 IPR020591 Chromosomal replication control, initiator DnaA-like NJ56_10860 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae NJ56_10860 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10865 IPR006659 Arsenate reductase NJ56_10865 IPR006660 Arsenate reductase-like NJ56_10865 IPR036249 NJ56_10865 NJ56_10870 IPR001915 Peptidase M48 NJ56_10870 IPR011990 Tetratricopeptide-like helical domain NJ56_10870 IPR030873 NJ56_10870 NJ56_10875 IPR002549 Uncharacterised protein family UPF0118 NJ56_10880 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant NJ56_10880 IPR024706 Peroxiredoxin, AhpC-type NJ56_10880 IPR036249 NJ56_10880 NJ56_10885 IPR016867 Glycine cleavage repressor GcvR NJ56_10890 IPR002220 DapA-like NJ56_10890 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA NJ56_10890 IPR013785 Aldolase-type TIM barrel NJ56_10890 IPR020624 Dihydrodipicolinate synthetase, conserved site NJ56_10890 IPR020625 Dihydrodipicolinate synthetase, active site NJ56_10895 IPR010653 Lipoprotein, NlpB NJ56_10895 IPR014524 Outer membrane protein assembly factor BamC NJ56_10900 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase NJ56_10900 IPR018236 SAICAR synthetase, conserved site NJ56_10900 IPR028923 SAICAR synthetase/ADE2, N-terminal NJ56_10905 IPR007382 Uncharacterised protein family UPF0756, transmembrame NJ56_10910 IPR000182 GNAT domain NJ56_10910 IPR007807 Helicase domain NJ56_10910 IPR016181 Acyl-CoA N-acyltransferase NJ56_10910 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA NJ56_10910 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_10910 IPR033442 NJ56_10910 NJ56_10910 IPR038321 NJ56_10910 NJ56_10915 IPR003140 Phospholipase/carboxylesterase/thioesterase NJ56_10915 IPR029058 Alpha/Beta hydrolase fold NJ56_10920 IPR020910 Uncharacterised protein family UPF0370 NJ56_10925 IPR003709 Peptidase M15B/M15C NJ56_10925 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NJ56_10930 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site NJ56_10930 IPR002933 Peptidase M20 NJ56_10930 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria NJ56_10930 IPR011650 Peptidase M20, dimerisation domain NJ56_10930 IPR036264 NJ56_10930 NJ56_10935 IPR006504 Transcriptional regulator Spx/MgsR NJ56_10935 IPR006660 Arsenate reductase-like NJ56_10935 IPR036249 NJ56_10935 NJ56_10940 IPR002701 Chorismate mutase NJ56_10940 IPR008240 Chorismate mutase, periplasmic NJ56_10940 IPR036263 NJ56_10940 NJ56_10945 IPR011990 Tetratricopeptide-like helical domain NJ56_10950 IPR001036 Acriflavin resistance protein NJ56_10950 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 NJ56_10950 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NJ56_10955 IPR017162 Uncharacterised conserved protein UCP037266 NJ56_10955 IPR036388 NJ56_10955 NJ56_10960 IPR000792 Transcription regulator LuxR, C-terminal NJ56_10960 IPR001789 Signal transduction response regulator, receiver domain NJ56_10960 IPR011006 CheY-like superfamily NJ56_10960 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_10970 IPR004496 Ferredoxin-type protein NapF NJ56_10970 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_10970 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_10975 IPR005623 Chaperone NapD, nitrate reductase assembly NJ56_10980 IPR006656 Molybdopterin oxidoreductase NJ56_10980 IPR006657 Molydopterin dinucleotide-binding domain NJ56_10980 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain NJ56_10980 IPR009010 Aspartate decarboxylase-like domain NJ56_10980 IPR010051 Periplasmic nitrate reductase, large subunit NJ56_10980 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NJ56_10980 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site NJ56_10985 IPR005591 Nitrate reductase cytochrome c-type subunit NapB NJ56_10985 IPR036280 NJ56_10985 NJ56_10990 IPR005126 NapC/NirT cytochrome c, N-terminal NJ56_10990 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT NJ56_10990 IPR024717 Denitrification system component NapC/NirT/NrfH NJ56_10990 IPR036280 NJ56_10990 NJ56_10990 IPR038266 NJ56_10990 NJ56_10995 IPR000086 NUDIX hydrolase domain NJ56_10995 IPR004385 Nucleoside diphosphate pyrophosphatase NJ56_10995 IPR015797 NUDIX hydrolase domain-like NJ56_11000 IPR002505 Phosphate acetyl/butaryl transferase NJ56_11000 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase NJ56_11000 IPR012301 Malic enzyme, N-terminal domain NJ56_11000 IPR012302 Malic enzyme, NAD-binding NJ56_11000 IPR015884 Malic enzyme, conserved site NJ56_11000 IPR036291 NJ56_11000 NJ56_11000 IPR037062 NJ56_11000 NJ56_11005 IPR003791 Protein of unknown function UPF0178 NJ56_11010 IPR001260 Coproporphyrinogen III oxidase, aerobic NJ56_11010 IPR018375 Coproporphyrinogen III oxidase, conserved site NJ56_11010 IPR036406 NJ56_11010 NJ56_11015 IPR000182 GNAT domain NJ56_11015 IPR016181 Acyl-CoA N-acyltransferase NJ56_11015 IPR017255 Acetyltransferase, GNAT, predicted NJ56_11015 IPR023072 Acetyltransferase, YpeA NJ56_11025 IPR002182 NB-ARC NJ56_11025 IPR011664 Abortive infection system protein AbiD/AbiF-like NJ56_11025 IPR011990 Tetratricopeptide-like helical domain NJ56_11025 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_11030 IPR021835 Protein of unknown function DUF3427 NJ56_11035 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_11035 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_11050 IPR036390 NJ56_11050 NJ56_11060 IPR036457 NJ56_11060 NJ56_11070 IPR005220 Viral OB-fold, YgiW NJ56_11070 IPR016052 Bacteriophage 933W, L0136 NJ56_11070 IPR036700 NJ56_11070 NJ56_11075 IPR010938 Protein of unknown function DUF1131 NJ56_11075 IPR038714 NJ56_11075 NJ56_11080 IPR006314 Dyp-type peroxidase NJ56_11080 IPR011008 Dimeric alpha-beta barrel NJ56_11085 IPR002220 DapA-like NJ56_11085 IPR013785 Aldolase-type TIM barrel NJ56_11085 IPR020624 Dihydrodipicolinate synthetase, conserved site NJ56_11090 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase NJ56_11090 IPR011060 Ribulose-phosphate binding barrel NJ56_11090 IPR013785 Aldolase-type TIM barrel NJ56_11095 IPR000600 ROK NJ56_11100 IPR004375 Conserved hypothetical protein CHP00022 NJ56_11100 IPR037012 NJ56_11100 NJ56_11105 IPR000281 Helix-turn-helix protein RpiR NJ56_11105 IPR001347 Sugar isomerase (SIS) NJ56_11105 IPR009057 Homeodomain-like NJ56_11105 IPR036388 NJ56_11105 NJ56_11110 IPR004742 Sialic acid transporter NJ56_11110 IPR011701 Major facilitator superfamily NJ56_11110 IPR036259 NJ56_11110 NJ56_11115 IPR005669 Thiosulphate/Sulfate-binding protein NJ56_11120 IPR000515 MetI-like domain NJ56_11120 IPR005667 Sulphate ABC transporter permease protein 2 NJ56_11120 IPR011865 Sulphate ABC transporter, permease protein CysT NJ56_11120 IPR035906 NJ56_11120 NJ56_11125 IPR000515 MetI-like domain NJ56_11125 IPR005667 Sulphate ABC transporter permease protein 2 NJ56_11125 IPR011866 Sulphate ABC transporter, permease protein CysW NJ56_11125 IPR035906 NJ56_11125 NJ56_11130 IPR003439 ABC transporter-like NJ56_11130 IPR003593 AAA+ ATPase domain NJ56_11130 IPR005666 Sulphate transport system permease protein 1 NJ56_11130 IPR008995 Molybdate/tungstate binding, C-terminal NJ56_11130 IPR017871 ABC transporter, conserved site NJ56_11130 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_11135 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site NJ56_11135 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NJ56_11135 IPR005856 Cysteine synthase K/M NJ56_11135 IPR005858 Cysteine synthase B NJ56_11135 IPR036052 NJ56_11135 NJ56_11140 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 NJ56_11140 IPR011055 Duplicated hybrid motif NJ56_11145 IPR000121 PEP-utilising enzyme, C-terminal NJ56_11145 IPR006318 Phosphoenolpyruvate-utilising enzyme NJ56_11145 IPR008279 PEP-utilising enzyme, mobile domain NJ56_11145 IPR008731 Phosphotransferase system, enzyme I N-terminal NJ56_11145 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain NJ56_11145 IPR018274 PEP-utilising enzyme, active site NJ56_11145 IPR023151 PEP-utilising enzyme, conserved site NJ56_11145 IPR024692 Phosphotransferase system, enzyme I NJ56_11145 IPR036618 NJ56_11145 NJ56_11145 IPR036637 NJ56_11145 NJ56_11150 IPR000032 Phosphocarrier HPr protein-like NJ56_11150 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site NJ56_11150 IPR002114 Phosphotransferase system, HPr serine phosphorylation site NJ56_11150 IPR035895 NJ56_11150 NJ56_11155 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site NJ56_11155 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NJ56_11155 IPR005856 Cysteine synthase K/M NJ56_11155 IPR005859 Cysteine synthase A NJ56_11155 IPR036052 NJ56_11155 NJ56_11160 IPR022985 CysZ, gammaproteobacteria NJ56_11165 IPR007449 ZipA, C-terminal FtsZ-binding domain NJ56_11165 IPR011919 Cell division protein ZipA NJ56_11165 IPR036765 NJ56_11165 NJ56_11170 IPR001357 BRCT domain NJ56_11170 IPR001679 NAD-dependent DNA ligase NJ56_11170 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 NJ56_11170 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type NJ56_11170 IPR004150 NAD-dependent DNA ligase, OB-fold NJ56_11170 IPR010994 RuvA domain 2-like NJ56_11170 IPR012340 Nucleic acid-binding, OB-fold NJ56_11170 IPR013839 NAD-dependent DNA ligase, adenylation NJ56_11170 IPR013840 NAD-dependent DNA ligase, N-terminal NJ56_11170 IPR018239 NAD-dependent DNA ligase, active site NJ56_11170 IPR033136 NJ56_11170 NJ56_11170 IPR036420 NJ56_11170 NJ56_11175 IPR024530 Protein of unknown function DUF3820 NJ56_11180 IPR025577 FlxA-like protein NJ56_11185 IPR009267 Protein of unknown function DUF925 NJ56_11205 IPR000924 Glutamyl/glutaminyl-tRNA synthetase NJ56_11205 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NJ56_11205 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial NJ56_11205 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding NJ56_11205 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_11205 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain NJ56_11205 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 NJ56_11240 IPR002668 Concentrative nucleoside transporter N-terminal domain NJ56_11240 IPR011642 Nucleoside recognition Gate NJ56_11240 IPR011657 Concentrative nucleoside transporter C-terminal domain NJ56_11245 IPR001046 NRAMP family NJ56_11250 IPR019638 Protein of unknown function DUF2502 NJ56_11255 IPR000847 Transcription regulator HTH, LysR NJ56_11255 IPR005119 LysR, substrate-binding NJ56_11255 IPR036388 NJ56_11255 NJ56_11255 IPR036390 NJ56_11255 NJ56_11260 IPR007896 Transmembrane pair, bacterial NJ56_11265 IPR003836 Glucokinase NJ56_11270 IPR011701 Major facilitator superfamily NJ56_11270 IPR036259 NJ56_11270 NJ56_11275 IPR001789 Signal transduction response regulator, receiver domain NJ56_11275 IPR007492 LytTR DNA-binding domain NJ56_11275 IPR011006 CheY-like superfamily NJ56_11280 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_11280 IPR010559 Signal transduction histidine kinase, internal region NJ56_11280 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region NJ56_11280 IPR036890 NJ56_11280 NJ56_11285 IPR010856 Protein of unknown function DUF1479 NJ56_11285 IPR027443 Isopenicillin N synthase-like NJ56_11290 IPR004839 Aminotransferase, class I/classII NJ56_11290 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_11290 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_11290 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_11295 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase NJ56_11295 IPR016174 Di-haem cytochrome, transmembrane NJ56_11305 IPR031807 NJ56_11305 NJ56_11305 IPR035069 NJ56_11305 NJ56_11310 IPR011757 Lytic transglycosylase MltB NJ56_11310 IPR023346 Lysozyme-like domain NJ56_11310 IPR031304 NJ56_11310 NJ56_11315 IPR004624 PhnA protein NJ56_11315 IPR013987 PhnA protein, N-terminal NJ56_11315 IPR013988 PhnA protein, C-terminal NJ56_11320 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain NJ56_11320 IPR011324 Cytotoxic necrotizing factor-like, catalytic NJ56_11320 IPR037040 NJ56_11320 NJ56_11330 IPR003439 ABC transporter-like NJ56_11330 IPR003593 AAA+ ATPase domain NJ56_11330 IPR005895 ABC transporter, haem export, CcmA NJ56_11330 IPR017871 ABC transporter, conserved site NJ56_11330 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_11335 IPR003544 Cytochrome c-type biogenesis protein CcmB NJ56_11335 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria NJ56_11340 IPR002541 Cytochrome c assembly protein NJ56_11340 IPR003557 Cytochrome c-type biogenesis protein CcmC NJ56_11345 IPR007078 Haem exporter protein D (CcmD) NJ56_11350 IPR004329 CcmE/CycJ protein NJ56_11350 IPR036127 NJ56_11350 NJ56_11355 IPR002541 Cytochrome c assembly protein NJ56_11355 IPR003567 Cytochrome c-type biogenesis protein NJ56_11355 IPR003568 Cytochrome c-type biogenesis protein CcmF NJ56_11355 IPR032523 NJ56_11355 NJ56_11360 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE NJ56_11360 IPR013740 Redoxin NJ56_11360 IPR017937 Thioredoxin, conserved site NJ56_11360 IPR036249 NJ56_11360 NJ56_11365 IPR005616 Cytochrome C biogenesis protein CcmH NJ56_11365 IPR038297 NJ56_11365 NJ56_11370 IPR011990 Tetratricopeptide-like helical domain NJ56_11370 IPR017560 Cytochrome c-type biogenesis protein CcmI NJ56_11375 IPR007428 VacJ-like lipoprotein NJ56_11380 IPR005017 Membrane protein, aromatic hydrocarbon degradation NJ56_11385 IPR005272 Conserved hypothetical protein CHP00743 NJ56_11385 IPR035571 NJ56_11385 NJ56_11390 IPR002155 Thiolase NJ56_11390 IPR012806 Acetyl-CoA C-acyltransferase FadI NJ56_11390 IPR016039 Thiolase-like NJ56_11390 IPR020610 Thiolase, active site NJ56_11390 IPR020613 Thiolase, conserved site NJ56_11390 IPR020615 Thiolase, acyl-enzyme intermediate active site NJ56_11390 IPR020616 Thiolase, N-terminal NJ56_11390 IPR020617 Thiolase, C-terminal NJ56_11395 IPR001753 Crotonase superfamily NJ56_11395 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NJ56_11395 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NJ56_11395 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site NJ56_11395 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_11395 IPR012802 Fatty oxidation complex, alpha subunit FadJ NJ56_11395 IPR029045 ClpP/crotonase-like domain NJ56_11395 IPR036291 NJ56_11395 NJ56_11405 IPR004449 Phosphohistidine phosphatase SixA, subgroup NJ56_11405 IPR013078 Histidine phosphatase superfamily, clade-1 NJ56_11405 IPR029033 Histidine phosphatase superfamily NJ56_11410 IPR002625 Smr protein/MutS2 C-terminal NJ56_11410 IPR022990 Uncharacterised protein family UPF0115 NJ56_11410 IPR036063 NJ56_11410 NJ56_11415 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_11415 IPR004556 Modification methylase HemK NJ56_11415 IPR007848 Methyltransferase small domain NJ56_11415 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase NJ56_11415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_11420 IPR000453 Chorismate synthase NJ56_11420 IPR020541 Chorismate synthase, conserved site NJ56_11420 IPR035904 NJ56_11420 NJ56_11425 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase NJ56_11425 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NJ56_11430 IPR002781 Transmembrane protein TauE like NJ56_11435 IPR007411 Protein of unknown function DUF462 NJ56_11440 IPR014987 Uncharacterised protein family YfcL NJ56_11445 IPR006076 FAD dependent oxidoreductase NJ56_11445 IPR008471 MnmC-like methyltransferase NJ56_11445 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal NJ56_11445 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC NJ56_11445 IPR036188 NJ56_11445 NJ56_11450 IPR014030 Beta-ketoacyl synthase, N-terminal NJ56_11450 IPR014031 Beta-ketoacyl synthase, C-terminal NJ56_11450 IPR016039 Thiolase-like NJ56_11450 IPR018201 Beta-ketoacyl synthase, active site NJ56_11450 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NJ56_11455 IPR007803 Arginine/Asparagine/Proline hydroxylase NJ56_11455 IPR027443 Isopenicillin N synthase-like NJ56_11460 IPR023597 Flagellar regulator Flk NJ56_11470 IPR017937 Thioredoxin, conserved site NJ56_11470 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NJ56_11470 IPR036249 NJ56_11470 NJ56_11475 IPR012336 Thioredoxin-like fold NJ56_11475 IPR017937 Thioredoxin, conserved site NJ56_11475 IPR036249 NJ56_11475 NJ56_11480 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant NJ56_11480 IPR036249 NJ56_11480 NJ56_11485 IPR000524 Transcription regulator HTH, GntR NJ56_11485 IPR004839 Aminotransferase, class I/classII NJ56_11485 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_11485 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_11485 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_11485 IPR036388 NJ56_11485 NJ56_11485 IPR036390 NJ56_11485 NJ56_11490 IPR000620 Drug/metabolite transporter NJ56_11495 IPR000620 Drug/metabolite transporter NJ56_11500 IPR009057 Homeodomain-like NJ56_11500 IPR011051 RmlC-like cupin domain NJ56_11500 IPR013096 Cupin 2, conserved barrel NJ56_11500 IPR014710 RmlC-like jelly roll fold NJ56_11500 IPR018060 DNA binding HTH domain, AraC-type NJ56_11500 IPR018062 HTH domain AraC-type, conserved site NJ56_11500 IPR020449 Transcription regulator HTH, AraC- type NJ56_11505 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NJ56_11505 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NJ56_11505 IPR020921 Erythronate-4-phosphate dehydrogenase NJ56_11505 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain NJ56_11505 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NJ56_11505 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NJ56_11505 IPR036291 NJ56_11505 NJ56_11505 IPR038251 NJ56_11505 NJ56_11510 IPR000534 Semialdehyde dehydrogenase, NAD-binding NJ56_11510 IPR012280 Semialdehyde dehydrogenase, dimerisation domain NJ56_11510 IPR036291 NJ56_11510 NJ56_11515 IPR001406 Pseudouridine synthase I, TruA NJ56_11515 IPR020095 Pseudouridine synthase I, TruA, C-terminal NJ56_11515 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain NJ56_11515 IPR020103 Pseudouridine synthase, catalytic domain NJ56_11520 IPR032816 NJ56_11520 NJ56_11525 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit NJ56_11525 IPR029045 ClpP/crotonase-like domain NJ56_11525 IPR034733 NJ56_11525 NJ56_11530 IPR001645 Folylpolyglutamate synthetase NJ56_11530 IPR004101 Mur ligase, C-terminal NJ56_11530 IPR013221 Mur ligase, central NJ56_11530 IPR018109 Folylpolyglutamate synthetase, conserved site NJ56_11530 IPR036565 NJ56_11530 NJ56_11530 IPR036615 NJ56_11530 NJ56_11535 IPR007730 Sporulation-related domain NJ56_11535 IPR032898 NJ56_11535 NJ56_11535 IPR036680 NJ56_11535 NJ56_11540 IPR003825 Colicin V production, CvpA NJ56_11545 IPR000836 Phosphoribosyltransferase domain NJ56_11545 IPR005854 Amidophosphoribosyl transferase NJ56_11545 IPR029055 Nucleophile aminohydrolases, N-terminal NJ56_11545 IPR029057 Phosphoribosyltransferase-like NJ56_11550 IPR003382 Flavoprotein NJ56_11550 IPR004507 Decarboxylase UbiX/Pad1 NJ56_11550 IPR036551 NJ56_11550 NJ56_11555 IPR001638 Extracellular solute-binding protein, family 3 NJ56_11555 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein NJ56_11555 IPR018313 Extracellular solute-binding protein, family 3, conserved site NJ56_11560 IPR000515 MetI-like domain NJ56_11560 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family NJ56_11560 IPR035906 NJ56_11560 NJ56_11565 IPR000515 MetI-like domain NJ56_11565 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family NJ56_11565 IPR035906 NJ56_11565 NJ56_11570 IPR003439 ABC transporter-like NJ56_11570 IPR003593 AAA+ ATPase domain NJ56_11570 IPR017871 ABC transporter, conserved site NJ56_11570 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_11570 IPR030679 NJ56_11570 NJ56_11575 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain NJ56_11575 IPR010099 Sugar nucleotide epimerase YfcH,-like putative NJ56_11575 IPR013549 Domain of unknown function DUF1731 NJ56_11575 IPR036291 NJ56_11575 NJ56_11580 IPR004045 Glutathione S-transferase, N-terminal NJ56_11580 IPR004046 Glutathione S-transferase, C-terminal NJ56_11580 IPR036249 NJ56_11580 NJ56_11580 IPR036282 NJ56_11580 NJ56_11585 IPR001633 EAL domain NJ56_11585 IPR035919 NJ56_11585 NJ56_11590 IPR000979 Phosphodiesterase MJ0936/Vps29 NJ56_11590 IPR020935 Phosphodiesterase YfcE, conserved site NJ56_11590 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type NJ56_11590 IPR029052 Metallo-dependent phosphatase-like NJ56_11595 IPR000086 NUDIX hydrolase domain NJ56_11595 IPR015797 NUDIX hydrolase domain-like NJ56_11595 IPR024195 NUDIX hydrolase, YfcD, predicted NJ56_11600 IPR004703 Phosphotransferase system, sugar-specific permease component NJ56_11605 IPR003501 Phosphotransferase system, EIIB component, type 2/3 NJ56_11605 IPR036095 NJ56_11605 NJ56_11610 IPR002178 PTS EIIA type-2 domain NJ56_11610 IPR016152 Phosphotransferase/anion transporter NJ56_11615 IPR000843 Transcription regulator HTH, LacI NJ56_11615 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_11615 IPR028082 Periplasmic binding protein-like I NJ56_11620 IPR002505 Phosphate acetyl/butaryl transferase NJ56_11620 IPR004614 Phosphate acetyltransferase NJ56_11620 IPR010766 DRTGG NJ56_11620 IPR016475 Phosphate acetyltransferase, bacteria NJ56_11620 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_11620 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like NJ56_11625 IPR000890 Aliphatic acid kinase, short-chain NJ56_11625 IPR004372 Acetate/Proprionate kinase NJ56_11625 IPR023865 Aliphatic acid kinase, short-chain, conserved site NJ56_11630 IPR007334 Uncharacterised protein family UPF0208 NJ56_11635 IPR005587 Uncharacterised protein family UPF0304, YfbU NJ56_11635 IPR023145 YfbU, helix-hairpin domain NJ56_11635 IPR023146 YfbU, alpha-helical bundle domain NJ56_11645 IPR004680 Citrate transporter-like domain NJ56_11645 IPR006037 Regulator of K+ conductance, C-terminal NJ56_11645 IPR031312 NJ56_11645 NJ56_11645 IPR036721 NJ56_11645 NJ56_11650 IPR003607 HD/PDEase domain NJ56_11650 IPR006674 HD domain NJ56_11650 IPR022971 5'-deoxynucleotidase YfbR NJ56_11655 IPR004839 Aminotransferase, class I/classII NJ56_11655 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_11655 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_11655 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_11665 IPR000847 Transcription regulator HTH, LysR NJ56_11665 IPR005119 LysR, substrate-binding NJ56_11665 IPR036388 NJ56_11665 NJ56_11665 IPR036390 NJ56_11665 NJ56_11670 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 NJ56_11670 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid NJ56_11670 IPR038430 NJ56_11670 NJ56_11675 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit NJ56_11675 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit NJ56_11680 IPR001135 NADH-quinone oxidoreductase, subunit D NJ56_11680 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit NJ56_11680 IPR010218 NADH dehydrogenase, subunit C NJ56_11680 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site NJ56_11680 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H NJ56_11680 IPR023062 NADH dehydrogenase, subunit CD NJ56_11680 IPR029014 NiFe hydrogenase-like NJ56_11680 IPR037232 NJ56_11680 NJ56_11680 IPR038290 NJ56_11680 NJ56_11685 IPR002023 NADH-quinone oxidoreductase subunit E-like NJ56_11685 IPR036249 NJ56_11685 NJ56_11690 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site NJ56_11690 IPR011537 NADH ubiquinone oxidoreductase, F subunit NJ56_11690 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit NJ56_11690 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding NJ56_11690 IPR037207 NJ56_11690 NJ56_11690 IPR037225 NJ56_11690 NJ56_11695 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site NJ56_11695 IPR006656 Molybdopterin oxidoreductase NJ56_11695 IPR006657 Molydopterin dinucleotide-binding domain NJ56_11695 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain NJ56_11695 IPR009010 Aspartate decarboxylase-like domain NJ56_11695 IPR010228 NADH:ubiquinone oxidoreductase, subunit G NJ56_11695 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding NJ56_11695 IPR036010 NJ56_11695 NJ56_11700 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H NJ56_11700 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site NJ56_11705 IPR010226 NADH-quinone oxidoreductase, chain I NJ56_11705 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_11705 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_11710 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 NJ56_11715 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K NJ56_11715 IPR039428 NJ56_11715 NJ56_11720 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal NJ56_11720 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase NJ56_11720 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 NJ56_11720 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup NJ56_11725 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase NJ56_11725 IPR003918 NADH:ubiquinone oxidoreductase NJ56_11725 IPR010227 NADH-quinone oxidoreductase, chain M/4 NJ56_11730 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase NJ56_11730 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 NJ56_11735 IPR009476 Protein of unknown function DUF1097 NJ56_11740 IPR010279 Protein of unknown function DUF883, ElaB NJ56_11745 IPR004561 Isochorismate synthase NJ56_11745 IPR005801 ADC synthase NJ56_11745 IPR015890 Chorismate binding, C-terminal NJ56_11745 IPR034681 NJ56_11745 NJ56_11750 IPR004433 Menaquinone biosynthesis protein MenD NJ56_11750 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NJ56_11750 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain NJ56_11750 IPR029035 DHS-like NAD/FAD-binding domain NJ56_11750 IPR029061 Thiamin diphosphate-binding fold NJ56_11750 IPR032264 NJ56_11750 NJ56_11755 IPR000073 Alpha/beta hydrolase fold-1 NJ56_11755 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase NJ56_11755 IPR029058 Alpha/Beta hydrolase fold NJ56_11760 IPR001753 Crotonase superfamily NJ56_11760 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase NJ56_11760 IPR014748 Crontonase, C-terminal NJ56_11760 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NJ56_11760 IPR029045 ClpP/crotonase-like domain NJ56_11765 IPR010196 O-succinylbenzoic acid (OSB) synthetase NJ56_11765 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NJ56_11765 IPR029017 Enolase N-terminal domain-like NJ56_11765 IPR029065 Enolase C-terminal domain-like NJ56_11765 IPR036849 NJ56_11765 NJ56_11770 IPR000873 AMP-dependent synthetase/ligase NJ56_11770 IPR010192 2-succinylbenzoate--CoA ligase NJ56_11770 IPR020845 AMP-binding, conserved site NJ56_11770 IPR025110 AMP-binding enzyme C-terminal domain NJ56_11775 IPR002226 Catalase haem-binding site NJ56_11775 IPR010582 Catalase immune-responsive domain NJ56_11775 IPR011614 Catalase core domain NJ56_11775 IPR018028 Catalase, mono-functional, haem-containing NJ56_11775 IPR020835 Catalase-like domain NJ56_11775 IPR024708 Catalase active site NJ56_11775 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 NJ56_11775 IPR037060 NJ56_11775 NJ56_11780 IPR009998 YfaZ NJ56_11780 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel NJ56_11785 IPR013059 Tryptophan/tyrosine transporter NJ56_11785 IPR013061 Tryptophan/tryrosine permease, conserved site NJ56_11785 IPR018227 Tryptophan/tyrosine permease NJ56_11790 IPR025686 Glucosyl transferase II NJ56_11795 IPR001173 Glycosyltransferase 2-like NJ56_11795 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_11800 IPR007267 GtrA-like protein NJ56_11800 IPR016480 Glucose translocase, bactoprenol-linked NJ56_11805 IPR001453 Molybdopterin binding domain NJ56_11805 IPR008135 Competence-induced protein CinA NJ56_11805 IPR036425 NJ56_11805 NJ56_11805 IPR036653 NJ56_11805 NJ56_11810 IPR005658 Proteinase inhibitor I11, ecotin NJ56_11810 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria NJ56_11810 IPR036198 NJ56_11810 NJ56_11815 IPR008936 Rho GTPase activation protein NJ56_11820 IPR001041 2Fe-2S ferredoxin-type domain NJ56_11820 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NJ56_11820 IPR012675 Beta-grasp domain NJ56_11820 IPR036010 NJ56_11820 NJ56_11825 IPR000358 Ribonucleotide reductase small subunit NJ56_11825 IPR009078 Ferritin-like superfamily NJ56_11825 IPR012348 Ribonucleotide reductase-related NJ56_11825 IPR030475 NJ56_11825 NJ56_11830 IPR000788 Ribonucleotide reductase large subunit, C-terminal NJ56_11830 IPR005144 ATP-cone NJ56_11830 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal NJ56_11830 IPR013346 Ribonucleotide reductase, class I , alpha subunit NJ56_11830 IPR013509 Ribonucleotide reductase large subunit, N-terminal NJ56_11835 IPR010233 Ubiquinone biosynthesis O-methyltransferase NJ56_11835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_11840 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal NJ56_11840 IPR005743 DNA gyrase, subunit A NJ56_11840 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel NJ56_11840 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain NJ56_11840 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta NJ56_11840 IPR013760 DNA topoisomerase, type IIA-like domain NJ56_11840 IPR035516 NJ56_11840 NJ56_11845 IPR001789 Signal transduction response regulator, receiver domain NJ56_11845 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_11845 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_11845 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_11845 IPR011006 CheY-like superfamily NJ56_11845 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal NJ56_11845 IPR030856 NJ56_11845 NJ56_11845 IPR036097 NJ56_11845 NJ56_11845 IPR036890 NJ56_11845 NJ56_11845 IPR038388 NJ56_11845 NJ56_11850 IPR000792 Transcription regulator LuxR, C-terminal NJ56_11850 IPR001789 Signal transduction response regulator, receiver domain NJ56_11850 IPR011006 CheY-like superfamily NJ56_11850 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_11850 IPR030864 NJ56_11850 NJ56_11850 IPR036388 NJ56_11850 NJ56_11855 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_11855 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_11855 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NJ56_11855 IPR030861 NJ56_11855 NJ56_11855 IPR032306 NJ56_11855 NJ56_11855 IPR036097 NJ56_11855 NJ56_11855 IPR036641 NJ56_11855 NJ56_11855 IPR036890 NJ56_11855 NJ56_11855 IPR038616 NJ56_11855 NJ56_11860 IPR011701 Major facilitator superfamily NJ56_11860 IPR036259 NJ56_11860 NJ56_11865 IPR001702 Porin, Gram-negative type NJ56_11865 IPR001897 Porin, gammaproteobacterial NJ56_11865 IPR013793 Porin, Gram-negative type, conserved site NJ56_11865 IPR023614 Porin domain NJ56_11880 IPR000182 GNAT domain NJ56_11880 IPR016181 Acyl-CoA N-acyltransferase NJ56_11885 IPR001466 Beta-lactamase-related NJ56_11885 IPR012338 Beta-lactamase/transpeptidase-like NJ56_11890 IPR001279 Beta-lactamase-like NJ56_11890 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D NJ56_11890 IPR036866 NJ56_11890 NJ56_11895 IPR010391 DNA damage-inducible protein DinI-like NJ56_11895 IPR036687 NJ56_11895 NJ56_11905 IPR015073 Atu1913-like NJ56_11905 IPR036488 NJ56_11905 NJ56_11910 IPR010998 Integrase, Lambda-type, N-terminal NJ56_11910 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_11910 IPR013762 Integrase-like, catalytic core NJ56_11910 IPR015094 Integrase, lambda-type, N-terminal DNA-binding NJ56_11920 IPR012337 Ribonuclease H-like domain NJ56_11920 IPR033390 NJ56_11920 NJ56_11920 IPR036397 NJ56_11920 NJ56_11935 IPR019276 Bacteriophage VT2phi272, P20 NJ56_11955 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_11955 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_11955 IPR015927 Peptidase S24/S26A/S26B/S26C NJ56_11955 IPR036286 NJ56_11955 NJ56_11960 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_11975 IPR025317 Protein of unknown function DUF4222 NJ56_11980 IPR036388 NJ56_11980 NJ56_11985 IPR008593 DNA N-6-adenine-methyltransferase NJ56_11990 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like NJ56_11990 IPR016281 Crossover junction endodeoxyribonuclease, RusA NJ56_11990 IPR036614 NJ56_11990 NJ56_11995 IPR005039 Antirepressor protein, C-terminal NJ56_11995 IPR014054 Bacteriophage regulatory protein, Rha family NJ56_12000 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding NJ56_12005 IPR003615 HNH nuclease NJ56_12005 IPR010373 Protein of unknown function DUF968 NJ56_12010 IPR003222 Antitermination protein NJ56_12010 IPR036410 NJ56_12010 NJ56_12015 IPR001091 Restriction/modification DNA-methylase NJ56_12015 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_12015 IPR002941 DNA methylase N-4/N-6 NJ56_12015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_12020 IPR000073 Alpha/beta hydrolase fold-1 NJ56_12020 IPR029058 Alpha/Beta hydrolase fold NJ56_12030 IPR006481 Bacteriophage lambda, GpS, holin NJ56_12035 IPR000726 Glycoside hydrolase, family 19, catalytic NJ56_12035 IPR023346 Lysozyme-like domain NJ56_12040 IPR022538 Protein of unknown function DUF2570 NJ56_12050 IPR014054 Bacteriophage regulatory protein, Rha family NJ56_12055 IPR002711 HNH endonuclease NJ56_12055 IPR003615 HNH nuclease NJ56_12060 IPR006448 Putative phage terminase, small subunit, P27 family NJ56_12065 IPR005021 Phage terminase NJ56_12070 IPR006427 Phage portal protein, HK97 NJ56_12070 IPR006944 Bacteriophage/Gene transfer agent portal protein NJ56_12075 IPR006433 Prohead protease, HK97 family NJ56_12080 IPR024455 Phage capsid NJ56_12085 IPR006450 Phage protein of unkonwn function NJ56_12085 IPR021146 Phage gp6-like head-tail connector protein NJ56_12090 IPR008767 Bacteriophage SPP1, head-tail adaptor NJ56_12090 IPR038666 NJ56_12090 NJ56_12105 IPR024400 Protein of unknown function DUF2635 NJ56_12110 IPR007067 Tail sheath protein NJ56_12110 IPR020287 Tail sheath protein, C-terminal domain NJ56_12110 IPR035089 NJ56_12110 NJ56_12115 IPR019596 Bacteriophage Mu, GpM, tail tube NJ56_12120 IPR019289 Bacteriophage tail protein Gp41, putative NJ56_12125 IPR010090 Phage tail tape measure protein NJ56_12135 IPR009826 DNA circulation, N-terminal NJ56_12140 IPR023399 Baseplate-like protein, two-layer sandwich domain NJ56_12140 IPR026276 Baseplate protein GpP NJ56_12145 IPR013046 Bacteriophage Mu/P2, baseplate assembly NJ56_12145 IPR014462 Bacteriophage Mu, Gp45 NJ56_12150 IPR010877 Bacteriophage Mu, Gp46 NJ56_12155 IPR006949 Baseplate assembly protein J-like, predicted NJ56_12160 IPR018755 Bacteriophage Mu, Gp48 NJ56_12165 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 NJ56_12170 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly NJ56_12190 IPR000917 Sulfatase NJ56_12190 IPR012159 Membrane sulfatase, HI0842-related NJ56_12190 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha NJ56_12190 IPR017850 Alkaline-phosphatase-like, core domain NJ56_12190 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain NJ56_12195 IPR009857 Uncharacterised protein family UPF0352 NJ56_12195 IPR023202 YejL-like domain NJ56_12200 IPR007358 Nucleoid-associated protein NdpA NJ56_12205 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain NJ56_12205 IPR020055 Ribosomal protein L25, short-form NJ56_12205 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain NJ56_12205 IPR029751 Ribosomal protein L25 NJ56_12210 IPR001650 Helicase, C-terminal NJ56_12210 IPR006935 Helicase/UvrB domain NJ56_12210 IPR011332 Zinc-binding ribosomal protein NJ56_12210 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_12210 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_12210 IPR038587 NJ56_12210 NJ56_12215 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F NJ56_12215 IPR002942 RNA-binding S4 domain NJ56_12215 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F NJ56_12215 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site NJ56_12215 IPR020103 Pseudouridine synthase, catalytic domain NJ56_12215 IPR036986 NJ56_12215 NJ56_12220 IPR004812 Drug resistance transporter Bcr/CmlA subfamily NJ56_12220 IPR011701 Major facilitator superfamily NJ56_12220 IPR036259 NJ56_12220 NJ56_12225 IPR020489 Uncharacterised protein family YejG NJ56_12230 IPR003439 ABC transporter-like NJ56_12230 IPR003593 AAA+ ATPase domain NJ56_12230 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NJ56_12230 IPR017871 ABC transporter, conserved site NJ56_12230 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_12235 IPR000515 MetI-like domain NJ56_12235 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NJ56_12235 IPR035906 NJ56_12235 NJ56_12240 IPR000515 MetI-like domain NJ56_12240 IPR035906 NJ56_12240 NJ56_12245 IPR000914 Bacterial extracellular solute-binding protein, family 5 NJ56_12245 IPR030678 NJ56_12245 NJ56_12250 IPR001633 EAL domain NJ56_12250 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain NJ56_12250 IPR035919 NJ56_12250 NJ56_12255 IPR000064 Endopeptidase, NLPC/P60 domain NJ56_12255 IPR038765 NJ56_12255 NJ56_12260 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NJ56_12260 IPR032908 NJ56_12260 NJ56_12260 IPR036938 NJ56_12260 NJ56_12265 IPR003495 CobW/HypB/UreG domain NJ56_12265 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NJ56_12265 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_12280 IPR000669 Mannitol dehydrogenase NJ56_12280 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_12280 IPR013118 Mannitol dehydrogenase, C-terminal NJ56_12280 IPR013131 Mannitol dehydrogenase, N-terminal NJ56_12280 IPR013328 Dehydrogenase, multihelical NJ56_12280 IPR023027 Mannitol dehydrogenase, conserved site NJ56_12280 IPR036291 NJ56_12280 NJ56_12290 IPR004628 Mannonate dehydratase NJ56_12290 IPR036237 NJ56_12290 NJ56_12295 IPR001059 Translation elongation factor P/YeiP, central NJ56_12295 IPR008991 Translation protein SH3-like domain NJ56_12295 IPR011897 Translation elongation factor P-like, YeiP NJ56_12295 IPR012340 Nucleic acid-binding, OB-fold NJ56_12295 IPR013185 Translation elongation factor, KOW-like NJ56_12295 IPR013852 Translation elongation factor P/YeiP, conserved site NJ56_12295 IPR014722 Ribosomal protein L2 domain 2 NJ56_12295 IPR015365 Elongation factor P, C-terminal NJ56_12295 IPR020599 Translation elongation factor P/YeiP NJ56_12300 IPR002293 Amino acid/polyamine transporter I NJ56_12300 IPR013059 Tryptophan/tyrosine transporter NJ56_12300 IPR018227 Tryptophan/tyrosine permease NJ56_12310 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site NJ56_12310 IPR006656 Molybdopterin oxidoreductase NJ56_12310 IPR006657 Molydopterin dinucleotide-binding domain NJ56_12310 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase NJ56_12310 IPR009010 Aspartate decarboxylase-like domain NJ56_12315 IPR005126 NapC/NirT cytochrome c, N-terminal NJ56_12315 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK NJ56_12315 IPR036280 NJ56_12315 NJ56_12315 IPR038266 NJ56_12315 NJ56_12320 IPR000086 NUDIX hydrolase domain NJ56_12320 IPR015797 NUDIX hydrolase domain-like NJ56_12320 IPR020084 NUDIX hydrolase, conserved site NJ56_12320 IPR020476 NUDIX hydrolase NJ56_12325 IPR000032 Phosphocarrier HPr protein-like NJ56_12325 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site NJ56_12325 IPR002114 Phosphotransferase system, HPr serine phosphorylation site NJ56_12325 IPR002178 PTS EIIA type-2 domain NJ56_12325 IPR016152 Phosphotransferase/anion transporter NJ56_12325 IPR035895 NJ56_12325 NJ56_12330 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site NJ56_12330 IPR011611 Carbohydrate kinase PfkB NJ56_12330 IPR017583 Tagatose/fructose phosphokinase NJ56_12330 IPR022463 Fructose 1-phosphate kinase NJ56_12330 IPR029056 Ribokinase-like NJ56_12335 IPR003352 Phosphotransferase system, EIIC NJ56_12335 IPR003353 Phosphotransferase system, fructose-specific IIB subunit NJ56_12335 IPR003501 Phosphotransferase system, EIIB component, type 2/3 NJ56_12335 IPR006327 Phosphotransferase system, fructose IIC component NJ56_12335 IPR036095 NJ56_12335 NJ56_12340 IPR001719 AP endonuclease 2 NJ56_12340 IPR013022 Xylose isomerase-like, TIM barrel domain NJ56_12340 IPR018246 AP endonuclease 2, zinc binding site NJ56_12340 IPR036237 NJ56_12340 NJ56_12345 IPR004630 Uncharacterised protein family UPF0324, bacteria NJ56_12345 IPR018383 Uncharacterised protein family UPF0324, prokaryote NJ56_12360 IPR000847 Transcription regulator HTH, LysR NJ56_12360 IPR005119 LysR, substrate-binding NJ56_12360 IPR036388 NJ56_12360 NJ56_12360 IPR036390 NJ56_12360 NJ56_12365 IPR002293 Amino acid/polyamine transporter I NJ56_12365 IPR004840 Amino acid permease, conserved site NJ56_12365 IPR004841 Amino acid permease/ SLC12A domain NJ56_12370 IPR002491 ABC transporter periplasmic binding domain NJ56_12375 IPR000522 ABC transporter, permease protein NJ56_12375 IPR037294 NJ56_12375 NJ56_12380 IPR003439 ABC transporter-like NJ56_12380 IPR003593 AAA+ ATPase domain NJ56_12380 IPR017871 ABC transporter, conserved site NJ56_12380 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_12385 IPR000531 TonB-dependent receptor, beta-barrel NJ56_12385 IPR010916 TonB box, conserved site NJ56_12385 IPR012910 TonB-dependent receptor, plug NJ56_12385 IPR036942 NJ56_12385 NJ56_12385 IPR037066 NJ56_12385 NJ56_12395 IPR002293 Amino acid/polyamine transporter I NJ56_12400 IPR012337 Ribonuclease H-like domain NJ56_12400 IPR013520 Exonuclease, RNase T/DNA polymerase III NJ56_12400 IPR013620 Exonuclease C-terminal NJ56_12400 IPR023607 Exodeoxyribonuclease I NJ56_12400 IPR036397 NJ56_12400 NJ56_12400 IPR038649 NJ56_12400 NJ56_12405 IPR013120 Male sterility, NAD-binding NJ56_12405 IPR036291 NJ56_12405 NJ56_12410 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein NJ56_12415 IPR007458 Protein of unknown function DUF496 NJ56_12425 IPR035897 NJ56_12425 NJ56_12430 IPR002641 Patatin/Phospholipase A2-related NJ56_12430 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NJ56_12435 IPR015032 MTH538 TIR-like domain NJ56_12440 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain NJ56_12440 IPR035897 NJ56_12440 NJ56_12460 IPR015032 MTH538 TIR-like domain NJ56_12460 IPR036490 NJ56_12460 NJ56_12470 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_12475 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain NJ56_12475 IPR036926 NJ56_12475 NJ56_12485 IPR013610 Domain of unknown function DUF1738 NJ56_12485 IPR017113 Antirestriction, ArdC NJ56_12495 IPR016387 Mobilization, MobA NJ56_12495 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_12495 IPR032689 NJ56_12495 NJ56_12505 IPR001482 Type II secretion system protein E NJ56_12505 IPR014155 Type IV secretion system protein VirB11 NJ56_12505 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NJ56_12505 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_12510 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI NJ56_12515 IPR010258 Conjugal transfer, TrbG/VirB9/CagX NJ56_12515 IPR014148 P-type conjugative transfer protein VirB9 NJ56_12515 IPR038161 NJ56_12515 NJ56_12520 IPR007430 Bacterial virulence protein VirB8 NJ56_12520 IPR026264 Type IV secretion system protein VirB8/PtlE NJ56_12520 IPR032710 NJ56_12520 NJ56_12525 IPR007688 Conjugal transfer, TrbL/VirB6 NJ56_12535 IPR014158 Type IV secretion system, VirB5 NJ56_12535 IPR023220 Type IV secretion system, VirB5-domain NJ56_12540 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB NJ56_12540 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain NJ56_12540 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_12545 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 NJ56_12550 IPR000962 Zinc finger, DksA/TraR C4-type NJ56_12550 IPR012783 Zinc finger, C4 DksA/TraR-type NJ56_12555 IPR021364 Protein of unknown function DUF2857 NJ56_12560 IPR010260 Bacteriophage P4, Orf88 NJ56_12570 IPR018306 Bacteriophage T5, Orf172 DNA-binding NJ56_12570 IPR025280 Domain of unknown function DUF4041 NJ56_12575 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_12575 IPR038722 NJ56_12575 NJ56_12580 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_12580 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_12585 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_12585 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_12590 IPR002104 Integrase, catalytic NJ56_12590 IPR010998 Integrase, Lambda-type, N-terminal NJ56_12590 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_12590 IPR013762 Integrase-like, catalytic core NJ56_12590 IPR025166 Domain of unknown function DUF4102 NJ56_12590 IPR038488 NJ56_12590 NJ56_12600 IPR000595 Cyclic nucleotide-binding domain NJ56_12600 IPR012318 Helix-turn-helix motif, Crp-type NJ56_12600 IPR014710 RmlC-like jelly roll fold NJ56_12600 IPR018490 Cyclic nucleotide-binding-like NJ56_12600 IPR036388 NJ56_12600 NJ56_12600 IPR036390 NJ56_12600 NJ56_12605 IPR003439 ABC transporter-like NJ56_12605 IPR003593 AAA+ ATPase domain NJ56_12605 IPR008995 Molybdate/tungstate binding, C-terminal NJ56_12605 IPR013611 Transport-associated OB, type 2 NJ56_12605 IPR017871 ABC transporter, conserved site NJ56_12605 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_12610 IPR000515 MetI-like domain NJ56_12610 IPR035906 NJ56_12610 NJ56_12615 IPR026045 Ferric binding protein NJ56_12620 IPR000849 Sugar phosphate transporter NJ56_12620 IPR011701 Major facilitator superfamily NJ56_12620 IPR036259 NJ56_12620 NJ56_12625 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_12625 IPR007895 MASE1 NJ56_12625 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain NJ56_12625 IPR036890 NJ56_12625 NJ56_12630 IPR000792 Transcription regulator LuxR, C-terminal NJ56_12630 IPR001789 Signal transduction response regulator, receiver domain NJ56_12630 IPR011006 CheY-like superfamily NJ56_12630 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_12635 IPR001789 Signal transduction response regulator, receiver domain NJ56_12635 IPR011006 CheY-like superfamily NJ56_12635 IPR024187 Signal transduction response regulator, citrate/malate metabolism NJ56_12635 IPR028141 Transcriptional regulator NJ56_12640 IPR000014 PAS domain NJ56_12640 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_12640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_12640 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB NJ56_12640 IPR029151 Periplasmic sensor domain-like NJ56_12640 IPR033463 NJ56_12640 NJ56_12640 IPR035965 NJ56_12640 NJ56_12640 IPR036890 NJ56_12640 NJ56_12645 IPR004821 Cytidyltransferase-like domain NJ56_12645 IPR005216 Citrate lyase ligase NJ56_12645 IPR013166 Citrate lyase ligase, C-terminal NJ56_12645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_12645 IPR016181 Acyl-CoA N-acyltransferase NJ56_12650 IPR006495 Citrate lyase acyl carrier protein CitD NJ56_12650 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein NJ56_12655 IPR005000 HpcH/HpaI aldolase/citrate lyase domain NJ56_12655 IPR011206 Citrate lyase beta subunit-like NJ56_12655 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain NJ56_12660 IPR006472 Citrate lyase, alpha subunit NJ56_12660 IPR037171 NJ56_12660 NJ56_12665 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase NJ56_12670 IPR002736 Triphosphoribosyl-dephospho-CoA protein NJ56_12670 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG NJ56_12675 IPR001898 Sodium/sulphate symporter NJ56_12675 IPR030676 NJ56_12675 NJ56_12680 IPR003542 Enterobactin synthetase-like, component D NJ56_12680 IPR008278 4'-phosphopantetheinyl transferase superfamily NJ56_12680 IPR037143 NJ56_12680 NJ56_12695 IPR010384 MtfA family NJ56_12695 IPR024079 Metallopeptidase, catalytic domain NJ56_12705 IPR017704 Putative selenium-binding protein YdfZ NJ56_12710 IPR021266 Kdo hydroxylase NJ56_12715 IPR019713 Inner membrane protein YlaC NJ56_12720 IPR011032 GroES (chaperonin 10)-like NJ56_12720 IPR013149 Alcohol dehydrogenase, C-terminal NJ56_12720 IPR013154 Alcohol dehydrogenase GroES-like NJ56_12720 IPR014189 Quinone oxidoreductase PIG3 NJ56_12720 IPR020843 Polyketide synthase, enoylreductase NJ56_12720 IPR036291 NJ56_12720 NJ56_12725 IPR004199 Beta galactosidase small chain/ domain 5 NJ56_12725 IPR006101 Glycoside hydrolase, family 2 NJ56_12725 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich NJ56_12725 IPR006103 Glycoside hydrolase, family 2, TIM barrel NJ56_12725 IPR006104 Glycosyl hydrolases family 2, sugar binding domain NJ56_12725 IPR008979 Galactose-binding domain-like NJ56_12725 IPR011013 Galactose mutarotase-like domain NJ56_12725 IPR013783 Immunoglobulin-like fold NJ56_12725 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup NJ56_12725 IPR017853 Glycoside hydrolase, superfamily NJ56_12725 IPR023230 Glycoside hydrolase, family 2, conserved site NJ56_12725 IPR023232 Glycoside hydrolase, family 2, active site NJ56_12725 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase NJ56_12725 IPR032312 NJ56_12725 NJ56_12725 IPR036156 NJ56_12725 NJ56_12730 IPR000843 Transcription regulator HTH, LacI NJ56_12730 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_12730 IPR028082 Periplasmic binding protein-like I NJ56_12740 IPR002059 Cold-shock protein, DNA-binding NJ56_12740 IPR011129 Cold shock protein NJ56_12740 IPR012156 Cold shock, CspA NJ56_12740 IPR012340 Nucleic acid-binding, OB-fold NJ56_12740 IPR019844 Cold-shock conserved site NJ56_12745 IPR019717 Dextransucrase DSRB NJ56_12750 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding NJ56_12750 IPR003660 HAMP linker domain NJ56_12750 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_12750 IPR004090 Chemotaxis methyl-accepting receptor NJ56_12750 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site NJ56_12750 IPR035440 NJ56_12750 NJ56_12755 IPR003416 MgtC/SapB/SrpB transporter NJ56_12765 IPR006015 Universal stress protein A NJ56_12765 IPR006016 UspA NJ56_12765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_12775 IPR023559 Flagellar transcriptional activator FlhD NJ56_12775 IPR036194 NJ56_12775 NJ56_12780 IPR007944 Flagellar transcriptional activator FlhC NJ56_12785 IPR000540 Flagellar motor protein MotA, conserved site NJ56_12785 IPR002898 MotA/TolQ/ExbB proton channel NJ56_12785 IPR022522 Flagellar motor stator, MotA NJ56_12790 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal NJ56_12790 IPR025713 Motility protein B, N-terminal domain NJ56_12790 IPR036737 NJ56_12790 NJ56_12795 IPR002545 CheW-like protein NJ56_12795 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_12795 IPR004105 Histidine kinase CheA-like, homodimeric domain NJ56_12795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_12795 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NJ56_12795 IPR015162 CheY binding NJ56_12795 IPR035891 NJ56_12795 NJ56_12795 IPR036061 NJ56_12795 NJ56_12795 IPR036097 NJ56_12795 NJ56_12795 IPR036641 NJ56_12795 NJ56_12795 IPR036890 NJ56_12795 NJ56_12795 IPR037006 NJ56_12795 NJ56_12800 IPR002545 CheW-like protein NJ56_12800 IPR036061 NJ56_12800 NJ56_12805 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding NJ56_12805 IPR003660 HAMP linker domain NJ56_12805 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_12805 IPR004090 Chemotaxis methyl-accepting receptor NJ56_12805 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site NJ56_12805 IPR035440 NJ56_12805 NJ56_12810 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding NJ56_12810 IPR003660 HAMP linker domain NJ56_12810 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_12810 IPR004090 Chemotaxis methyl-accepting receptor NJ56_12810 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site NJ56_12810 IPR035440 NJ56_12810 NJ56_12815 IPR000780 MCP methyltransferase, CheR-type NJ56_12815 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal NJ56_12815 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NJ56_12815 IPR026024 Chemotaxis protein methyltransferase CheR NJ56_12815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_12815 IPR036804 NJ56_12815 NJ56_12820 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase NJ56_12820 IPR001789 Signal transduction response regulator, receiver domain NJ56_12820 IPR008248 Signal transduction response regulator, chemotaxis, CheB NJ56_12820 IPR011006 CheY-like superfamily NJ56_12820 IPR035909 NJ56_12820 NJ56_12825 IPR001789 Signal transduction response regulator, receiver domain NJ56_12825 IPR011006 CheY-like superfamily NJ56_12830 IPR007439 Chemotaxis phosphatase, CheZ NJ56_12840 IPR001867 Signal transduction response regulator, C-terminal NJ56_12840 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_12840 IPR036388 NJ56_12840 NJ56_12845 IPR001867 Signal transduction response regulator, C-terminal NJ56_12845 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_12845 IPR036388 NJ56_12845 NJ56_12855 IPR000259 Fimbrial-type adhesion domain NJ56_12855 IPR008966 Adhesion domain NJ56_12855 IPR036937 NJ56_12855 NJ56_12860 IPR000259 Fimbrial-type adhesion domain NJ56_12860 IPR008966 Adhesion domain NJ56_12860 IPR036937 NJ56_12860 NJ56_12865 IPR000259 Fimbrial-type adhesion domain NJ56_12865 IPR008966 Adhesion domain NJ56_12865 IPR036937 NJ56_12865 NJ56_12870 IPR001829 Pili assembly chaperone, bacterial NJ56_12870 IPR008962 PapD-like NJ56_12870 IPR013783 Immunoglobulin-like fold NJ56_12870 IPR016147 PapD, N-terminal, bacterial NJ56_12870 IPR016148 Pili assembly chaperone, C-terminal domain NJ56_12870 IPR036316 NJ56_12870 NJ56_12875 IPR000015 Outer membrane usher protein NJ56_12875 IPR018030 Fimbrial membrane usher, conserved site NJ56_12875 IPR025885 PapC, N-terminal domain NJ56_12875 IPR025949 PapC-like, C-terminal domain NJ56_12875 IPR037224 NJ56_12875 NJ56_12885 IPR000259 Fimbrial-type adhesion domain NJ56_12885 IPR008966 Adhesion domain NJ56_12885 IPR036937 NJ56_12885 NJ56_12890 IPR007016 O-antigen ligase-related NJ56_12890 IPR021797 Protein of unknown function DUF3366 NJ56_12890 IPR031726 NJ56_12890 NJ56_12895 IPR000792 Transcription regulator LuxR, C-terminal NJ56_12895 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_12895 IPR036388 NJ56_12895 NJ56_12900 IPR000209 Peptidase S8/S53 domain NJ56_12900 IPR015500 Peptidase S8, subtilisin-related NJ56_12900 IPR022398 Peptidase S8, subtilisin, His-active site NJ56_12900 IPR023827 Peptidase S8, subtilisin, Asp-active site NJ56_12900 IPR023828 Peptidase S8, subtilisin, Ser-active site NJ56_12900 IPR036852 NJ56_12900 NJ56_12905 IPR006135 Type III secretion system substrate exporter NJ56_12905 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB NJ56_12905 IPR029025 Type III secretion system substrate exporter, C-terminal NJ56_12910 IPR001712 Type III secretion system FHIPEP NJ56_12910 IPR006301 Flagellar biosynthesis protein FlhA NJ56_12910 IPR025505 FHIPEP conserved site NJ56_12915 IPR009420 Flagellar FlhE NJ56_12920 IPR007809 FlgN-like domain NJ56_12920 IPR036679 NJ56_12920 NJ56_12925 IPR007412 Anti-sigma-28 factor, FlgM NJ56_12925 IPR031316 NJ56_12925 NJ56_12925 IPR035890 NJ56_12925 NJ56_12930 IPR013974 SAF domain NJ56_12930 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal NJ56_12935 IPR001444 Flagellar basal body rod protein, N-terminal NJ56_12935 IPR006300 Flagellar basal-body rod protein FlgB NJ56_12935 IPR019776 Flagellar basal body rod protein, conserved site NJ56_12940 IPR001444 Flagellar basal body rod protein, N-terminal NJ56_12940 IPR006299 Flagellar basal-body rod protein FlgC NJ56_12940 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NJ56_12940 IPR019776 Flagellar basal body rod protein, conserved site NJ56_12945 IPR005648 Flagellar hook capping protein NJ56_12945 IPR025963 FlgD Tudor-like domain NJ56_12945 IPR025965 FlgD Ig-like domain NJ56_12950 IPR001444 Flagellar basal body rod protein, N-terminal NJ56_12950 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NJ56_12950 IPR011491 Flagellar basal body FlaE NJ56_12950 IPR019776 Flagellar basal body rod protein, conserved site NJ56_12950 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NJ56_12950 IPR037058 NJ56_12950 NJ56_12950 IPR037925 NJ56_12950 NJ56_12955 IPR001444 Flagellar basal body rod protein, N-terminal NJ56_12955 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NJ56_12955 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NJ56_12955 IPR037925 NJ56_12955 NJ56_12960 IPR001444 Flagellar basal body rod protein, N-terminal NJ56_12960 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NJ56_12960 IPR012834 Flagellar basal-body rod FlgG NJ56_12960 IPR019776 Flagellar basal body rod protein, conserved site NJ56_12960 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NJ56_12960 IPR037925 NJ56_12960 NJ56_12965 IPR000527 Flagellar L-ring protein NJ56_12970 IPR001782 Flagellar P-ring protein NJ56_12975 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain NJ56_12975 IPR013377 Flagellar rod assembly protein/muramidase FlgJ NJ56_12975 IPR019301 Flagellar protein FlgJ, N-terminal NJ56_12980 IPR001444 Flagellar basal body rod protein, N-terminal NJ56_12980 IPR002371 Flagellar hook-associated protein, FlgK NJ56_12980 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NJ56_12985 IPR001029 Flagellin, D0/D1 domain NJ56_12985 IPR013384 Flagellar hook-associated protein 3 NJ56_12990 IPR002010 Type III secretion system inner membrane R protein NJ56_12990 IPR006303 Flagellar biosynthesis protein FliR NJ56_12995 IPR002191 Bacterial export protein family 3 NJ56_12995 IPR006305 Flagellar biosynthesis protein FliQ NJ56_13000 IPR005837 Flagellar transport protein FliP NJ56_13000 IPR005838 Type III secretion system inner membrane P protein NJ56_13005 IPR022781 Flagellar biosynthesis protein, FliO NJ56_13010 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb NJ56_13010 IPR001543 Surface presentation of antigen (SpoA) NJ56_13010 IPR012826 Flagellar motor switch FliN NJ56_13010 IPR031576 NJ56_13010 NJ56_13010 IPR036429 NJ56_13010 NJ56_13015 IPR001543 Surface presentation of antigen (SpoA) NJ56_13015 IPR001689 Flagellar motor switch protein FliM NJ56_13015 IPR028976 CheC-like domain NJ56_13015 IPR036429 NJ56_13015 NJ56_13020 IPR005503 Flagellar basal body-associated protein FliL NJ56_13030 IPR001635 Flagellar hook-length control protein FliK NJ56_13030 IPR021136 Flagellar hook-length control protein-like, C-terminal NJ56_13030 IPR038610 NJ56_13030 NJ56_13035 IPR012823 Flagellar export FliJ NJ56_13035 IPR018006 Flagellar FliJ, proteobacteria NJ56_13040 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NJ56_13040 IPR003593 AAA+ ATPase domain NJ56_13040 IPR005714 ATPase, type III secretion system, FliI/YscN NJ56_13040 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site NJ56_13040 IPR020005 Flagellar export ATPase FliI, clade 1 NJ56_13040 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_13045 IPR000563 Flagellar assembly protein FliH NJ56_13045 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE NJ56_13050 IPR000090 Flagellar motor switch protein FliG NJ56_13050 IPR011002 Flagellar motor switch protein FliG, alpha-helical NJ56_13050 IPR023087 NJ56_13050 NJ56_13050 IPR028263 Flagellar motor switch protein FliG, N-terminal domain NJ56_13050 IPR032779 NJ56_13050 NJ56_13055 IPR000067 Flagellar M-ring protein FliF NJ56_13055 IPR006182 Secretory protein YscJ/FliF NJ56_13055 IPR013556 Flagellar M-ring C-terminal NJ56_13060 IPR001624 Flagellar hook-basal body complex protein FliE NJ56_13070 IPR001604 DNA/RNA non-specific endonuclease NJ56_13070 IPR018524 DNA/RNA non-specific endonuclease, active site NJ56_13070 IPR020821 Extracellular Endonuclease, subunit A NJ56_13075 IPR003148 Regulator of K+ conductance, N-terminal NJ56_13075 IPR013099 Two pore domain potassium channel domain NJ56_13075 IPR036291 NJ56_13075 NJ56_13080 IPR003607 HD/PDEase domain NJ56_13080 IPR029151 Periplasmic sensor domain-like NJ56_13080 IPR033479 NJ56_13080 NJ56_13085 IPR009057 Homeodomain-like NJ56_13085 IPR018060 DNA binding HTH domain, AraC-type NJ56_13090 IPR008622 Flagellar protein FliT NJ56_13095 IPR003713 Flagellar protein FliS NJ56_13095 IPR036584 NJ56_13095 NJ56_13100 IPR003481 Flagellar hook-associated protein 2, N-terminal NJ56_13100 IPR010809 Flagellar hook-associated 2, C-terminal NJ56_13100 IPR010810 Flagellin hook, IN motif NJ56_13105 IPR001029 Flagellin, D0/D1 domain NJ56_13105 IPR001492 Flagellin NJ56_13110 IPR001029 Flagellin, D0/D1 domain NJ56_13110 IPR001492 Flagellin NJ56_13115 IPR001029 Flagellin, D0/D1 domain NJ56_13115 IPR001492 Flagellin NJ56_13120 IPR000943 RNA polymerase sigma-70 NJ56_13120 IPR007624 RNA polymerase sigma-70 region 3 NJ56_13120 IPR007627 RNA polymerase sigma-70 region 2 NJ56_13120 IPR007630 RNA polymerase sigma-70 region 4 NJ56_13120 IPR012845 RNA polymerase sigma factor, FliA/WhiG NJ56_13120 IPR013324 RNA polymerase sigma factor, region 3/4 NJ56_13120 IPR013325 RNA polymerase sigma factor, region 2 NJ56_13120 IPR014284 RNA polymerase sigma-70 like domain NJ56_13120 IPR028617 RNA polymerase sigma factor FliA NJ56_13125 IPR004107 Integrase, SAM-like, N-terminal NJ56_13125 IPR022523 Flagellar regulator, FliZ NJ56_13130 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NJ56_13130 IPR005966 D-cysteine desulfhydrase NJ56_13130 IPR023702 D-cysteine desulphhydrase, bacterial NJ56_13130 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase NJ56_13130 IPR036052 NJ56_13130 NJ56_13135 IPR001320 Ionotropic glutamate receptor NJ56_13135 IPR001638 Extracellular solute-binding protein, family 3 NJ56_13135 IPR018313 Extracellular solute-binding protein, family 3, conserved site NJ56_13140 IPR000515 MetI-like domain NJ56_13140 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family NJ56_13140 IPR035906 NJ56_13140 NJ56_13145 IPR003439 ABC transporter-like NJ56_13145 IPR003593 AAA+ ATPase domain NJ56_13145 IPR017871 ABC transporter, conserved site NJ56_13145 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_13145 IPR030679 NJ56_13145 NJ56_13150 IPR002872 Proline dehydrogenase domain NJ56_13150 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 NJ56_13150 IPR010985 Ribbon-helix-helix NJ56_13150 IPR013321 Arc-type ribbon-helix-helix NJ56_13150 IPR015590 Aldehyde dehydrogenase domain NJ56_13150 IPR016160 Aldehyde dehydrogenase, cysteine active site NJ56_13150 IPR016161 Aldehyde/histidinol dehydrogenase NJ56_13150 IPR016162 Aldehyde dehydrogenase, N-terminal NJ56_13150 IPR016163 Aldehyde dehydrogenase, C-terminal NJ56_13150 IPR024082 Proline dehydrogenase PutA, domain II NJ56_13150 IPR024089 Proline dehydrogenase PutA, domain I/II NJ56_13150 IPR024090 Proline dehydrogenase PutA, domain I NJ56_13150 IPR025703 Bifunctional protein PutA NJ56_13150 IPR029041 FAD-linked oxidoreductase-like NJ56_13150 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NJ56_13155 IPR001734 Sodium/solute symporter NJ56_13155 IPR011851 Sodium/proline symporter NJ56_13155 IPR018212 Sodium/solute symporter, conserved site NJ56_13155 IPR038377 NJ56_13155 NJ56_13160 IPR001867 Signal transduction response regulator, C-terminal NJ56_13160 IPR011990 Tetratricopeptide-like helical domain NJ56_13160 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_13160 IPR036388 NJ56_13160 NJ56_13165 IPR002293 Amino acid/polyamine transporter I NJ56_13165 IPR004754 Amino acid antiporter NJ56_13170 IPR000310 Orn/Lys/Arg decarboxylase, major domain NJ56_13170 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal NJ56_13170 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal NJ56_13170 IPR011193 Ornithine/lysine/arginine decarboxylase NJ56_13170 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_13170 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_13170 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_13170 IPR036633 NJ56_13170 NJ56_13175 IPR002293 Amino acid/polyamine transporter I NJ56_13175 IPR004840 Amino acid permease, conserved site NJ56_13175 IPR004841 Amino acid permease/ SLC12A domain NJ56_13185 IPR002104 Integrase, catalytic NJ56_13185 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_13185 IPR013762 Integrase-like, catalytic core NJ56_13190 IPR002347 Glucose/ribitol dehydrogenase NJ56_13190 IPR020904 Short-chain dehydrogenase/reductase, conserved site NJ56_13190 IPR036291 NJ56_13190 NJ56_13200 IPR000792 Transcription regulator LuxR, C-terminal NJ56_13200 IPR001789 Signal transduction response regulator, receiver domain NJ56_13200 IPR011006 CheY-like superfamily NJ56_13200 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_13205 IPR000305 GIY-YIG nuclease superfamily NJ56_13205 IPR001162 UvrC family homology region NJ56_13205 IPR001943 UVR domain NJ56_13205 IPR004791 UvrABC system, subunit C NJ56_13205 IPR010994 RuvA domain 2-like NJ56_13205 IPR035901 NJ56_13205 NJ56_13205 IPR036876 NJ56_13205 NJ56_13205 IPR038476 NJ56_13205 NJ56_13210 IPR000462 CDP-alcohol phosphatidyltransferase NJ56_13210 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase NJ56_13230 IPR007684 Zinc finger, Ogr/Delta-type NJ56_13240 IPR009734 Myoviridae, GpU NJ56_13240 IPR016912 Bacteriophage P2, GpU NJ56_13245 IPR010090 Phage tail tape measure protein NJ56_13250 IPR009493 Burkholderia phage phiE202, Gp27 NJ56_13255 IPR019289 Bacteriophage tail protein Gp41, putative NJ56_13260 IPR006498 Bacteriophage P2, FII, major tail tube protein NJ56_13265 IPR020287 Tail sheath protein, C-terminal domain NJ56_13265 IPR035089 NJ56_13265 NJ56_13275 IPR011083 Phage tail collar domain NJ56_13275 IPR022225 Phage tail fibre protein NJ56_13275 IPR037053 NJ56_13275 NJ56_13280 IPR006521 Tail protein I NJ56_13285 IPR006949 Baseplate assembly protein J-like, predicted NJ56_13285 IPR014507 Baseplate assembly protein J, predicted NJ56_13290 IPR007048 GpW/Gp25/anti-adapter protein IraD NJ56_13295 IPR006531 Gp5 N-terminal NJ56_13295 IPR013046 Bacteriophage Mu/P2, baseplate assembly NJ56_13295 IPR037026 NJ56_13295 NJ56_13305 IPR010359 Protein of unknown function DUF955 NJ56_13310 IPR025683 Protein beta NJ56_13320 IPR006522 Phage virion morphogensis protein NJ56_13325 IPR009678 Bacteriophage tail completion protein R NJ56_13330 IPR020000 Bacteriophage P2, LysB NJ56_13335 IPR002196 Glycoside hydrolase, family 24 NJ56_13335 IPR023346 Lysozyme-like domain NJ56_13340 IPR032118 NJ56_13340 NJ56_13345 IPR008861 Bacteriophage P2, GpX NJ56_13345 IPR036779 NJ56_13345 NJ56_13350 IPR009225 Bacteriophage head completion protein GpL NJ56_13355 IPR010270 Bacteriophage P2, GpM NJ56_13360 IPR006441 Bacteriophage P2, GpN, major capsid NJ56_13365 IPR009228 Capsid scaffolding protein GpO NJ56_13370 IPR004921 Terminase, large subunit NJ56_13370 IPR010332 ATPase terminase subunit, putative NJ56_13370 IPR035421 NJ56_13370 NJ56_13375 IPR006430 Phage portal protein, PBSX family NJ56_13375 IPR006944 Bacteriophage/Gene transfer agent portal protein NJ56_13375 IPR030935 NJ56_13375 NJ56_13390 IPR008766 Replication gene A protein NJ56_13395 IPR020126 Protein of unknown function DUF2732 NJ56_13410 IPR009679 Bacteriophage 186, CII NJ56_13420 IPR010744 Bacteriophage CI repressor NJ56_13420 IPR032499 NJ56_13420 NJ56_13425 IPR036420 NJ56_13425 NJ56_13430 IPR002104 Integrase, catalytic NJ56_13430 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_13430 IPR013762 Integrase-like, catalytic core NJ56_13465 IPR011646 KAP P-loop NJ56_13465 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_13485 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_13485 IPR012263 Adenine modification methylase, M.EcoRV-type NJ56_13485 IPR012327 D12 class N6 adenine-specific DNA methyltransferase NJ56_13485 IPR023095 Adenine-specific methyltransferase, domain 2 NJ56_13485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_13490 IPR020126 Protein of unknown function DUF2732 NJ56_13520 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_13520 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_13525 IPR018306 Bacteriophage T5, Orf172 DNA-binding NJ56_13525 IPR025280 Domain of unknown function DUF4041 NJ56_13540 IPR001584 Integrase, catalytic core NJ56_13540 IPR012337 Ribonuclease H-like domain NJ56_13540 IPR036397 NJ56_13540 NJ56_13545 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding NJ56_13545 IPR003660 HAMP linker domain NJ56_13545 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_13545 IPR004090 Chemotaxis methyl-accepting receptor NJ56_13545 IPR035440 NJ56_13545 NJ56_13555 IPR003439 ABC transporter-like NJ56_13555 IPR003593 AAA+ ATPase domain NJ56_13555 IPR008995 Molybdate/tungstate binding, C-terminal NJ56_13555 IPR017871 ABC transporter, conserved site NJ56_13555 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_13560 IPR000515 MetI-like domain NJ56_13560 IPR035906 NJ56_13560 NJ56_13565 IPR006061 Bacterial extracellular solute-binding family 1, conserved site NJ56_13565 IPR026045 Ferric binding protein NJ56_13575 IPR009056 Cytochrome c-like domain NJ56_13575 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit NJ56_13575 IPR036909 NJ56_13575 NJ56_13580 IPR036188 NJ56_13580 NJ56_13590 IPR000182 GNAT domain NJ56_13590 IPR016181 Acyl-CoA N-acyltransferase NJ56_13605 IPR031837 NJ56_13605 NJ56_13605 IPR038692 NJ56_13605 NJ56_13610 IPR001223 Glycoside hydrolase, family 18, catalytic domain NJ56_13610 IPR017853 Glycoside hydrolase, superfamily NJ56_13615 IPR013099 Two pore domain potassium channel domain NJ56_13620 IPR012338 Beta-lactamase/transpeptidase-like NJ56_13620 IPR015868 Glutaminase NJ56_13625 IPR002293 Amino acid/polyamine transporter I NJ56_13625 IPR022520 Putative glutamate/gamma-aminobutyrate antiporter NJ56_13630 IPR002129 Pyridoxal phosphate-dependent decarboxylase NJ56_13630 IPR010107 Glutamate decarboxylase NJ56_13630 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_13630 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_13630 IPR021115 Pyridoxal-phosphate binding site NJ56_13635 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F NJ56_13635 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NJ56_13635 IPR020103 Pseudouridine synthase, catalytic domain NJ56_13645 IPR003876 Arginine deiminase NJ56_13650 IPR002293 Amino acid/polyamine transporter I NJ56_13660 IPR018461 Na+/H+ antiporter, NhaC-like NJ56_13665 IPR018636 Protein of unknown function DUF2058 NJ56_13675 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F NJ56_13675 IPR002942 RNA-binding S4 domain NJ56_13675 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F NJ56_13675 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site NJ56_13675 IPR020103 Pseudouridine synthase, catalytic domain NJ56_13675 IPR036986 NJ56_13675 NJ56_13685 IPR003501 Phosphotransferase system, EIIB component, type 2/3 NJ56_13685 IPR036095 NJ56_13685 NJ56_13690 IPR003352 Phosphotransferase system, EIIC NJ56_13690 IPR004501 Phosphotransferase system, EIIC component, type 3 NJ56_13690 IPR004796 Phosphotransferase system, cellobiose-type IIC component NJ56_13695 IPR001360 Glycoside hydrolase, family 1 NJ56_13695 IPR017853 Glycoside hydrolase, superfamily NJ56_13695 IPR018120 Glycoside hydrolase, family 1, active site NJ56_13700 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit NJ56_13700 IPR036542 NJ56_13700 NJ56_13705 IPR009057 Homeodomain-like NJ56_13705 IPR011051 RmlC-like cupin domain NJ56_13705 IPR013096 Cupin 2, conserved barrel NJ56_13705 IPR014710 RmlC-like jelly roll fold NJ56_13705 IPR018060 DNA binding HTH domain, AraC-type NJ56_13705 IPR018062 HTH domain AraC-type, conserved site NJ56_13705 IPR020449 Transcription regulator HTH, AraC- type NJ56_13710 IPR006879 Uncharacterised protein family UPF0249/HpnK NJ56_13710 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NJ56_13710 IPR022948 Uncharacterised protein family UPF0249 NJ56_13735 IPR002059 Cold-shock protein, DNA-binding NJ56_13735 IPR011129 Cold shock protein NJ56_13735 IPR012156 Cold shock, CspA NJ56_13735 IPR012340 Nucleic acid-binding, OB-fold NJ56_13735 IPR019844 Cold-shock conserved site NJ56_13740 IPR002059 Cold-shock protein, DNA-binding NJ56_13740 IPR011129 Cold shock protein NJ56_13740 IPR012156 Cold shock, CspA NJ56_13740 IPR012340 Nucleic acid-binding, OB-fold NJ56_13740 IPR019844 Cold-shock conserved site NJ56_13745 IPR002059 Cold-shock protein, DNA-binding NJ56_13745 IPR011129 Cold shock protein NJ56_13745 IPR012156 Cold shock, CspA NJ56_13745 IPR012340 Nucleic acid-binding, OB-fold NJ56_13745 IPR019844 Cold-shock conserved site NJ56_13750 IPR013216 Methyltransferase type 11 NJ56_13750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_13760 IPR000182 GNAT domain NJ56_13760 IPR016181 Acyl-CoA N-acyltransferase NJ56_13765 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site NJ56_13765 IPR005905 D-alanine--D-alanine ligase NJ56_13765 IPR011095 D-alanine--D-alanine ligase, C-terminal NJ56_13765 IPR011127 D-alanine--D-alanine ligase, N-terminal domain NJ56_13765 IPR013815 ATP-grasp fold, subdomain 1 NJ56_13765 IPR016185 Pre-ATP-grasp domain NJ56_13770 IPR010486 HNS-dependent expression A/B NJ56_13770 IPR028623 HNS-dependent expression B NJ56_13770 IPR038303 NJ56_13770 NJ56_13775 IPR003558 Cytolethal distending toxin A/C NJ56_13775 IPR035992 NJ56_13775 NJ56_13780 IPR005135 Endonuclease/exonuclease/phosphatase NJ56_13780 IPR036691 NJ56_13780 NJ56_13785 IPR000014 PAS domain NJ56_13785 IPR000160 GGDEF domain NJ56_13785 IPR001610 PAC motif NJ56_13785 IPR013655 PAS fold-3 NJ56_13785 IPR029787 Nucleotide cyclase NJ56_13785 IPR035965 NJ56_13785 NJ56_13790 IPR000687 RIO kinase NJ56_13790 IPR011009 Protein kinase-like domain NJ56_13790 IPR018935 RIO kinase, conserved site NJ56_13795 IPR003439 ABC transporter-like NJ56_13795 IPR003593 AAA+ ATPase domain NJ56_13795 IPR011527 ABC transporter type 1, transmembrane domain NJ56_13795 IPR017871 ABC transporter, conserved site NJ56_13795 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_13795 IPR036640 NJ56_13795 NJ56_13800 IPR002293 Amino acid/polyamine transporter I NJ56_13800 IPR004754 Amino acid antiporter NJ56_13805 IPR009057 Homeodomain-like NJ56_13805 IPR018060 DNA binding HTH domain, AraC-type NJ56_13805 IPR018062 HTH domain AraC-type, conserved site NJ56_13805 IPR020449 Transcription regulator HTH, AraC- type NJ56_13810 IPR020262 Uncharacterised protein family YecJ NJ56_13815 IPR025611 YobH-like protein NJ56_13820 IPR020907 PhoP/PhoQ regulator MgrB NJ56_13825 IPR025594 YebO-like protein NJ56_13830 IPR019701 Bacteriophage P22, NinX NJ56_13835 IPR025135 Protein of unknown function DUF4060 NJ56_13840 IPR002293 Amino acid/polyamine transporter I NJ56_13840 IPR004840 Amino acid permease, conserved site NJ56_13840 IPR004841 Amino acid permease/ SLC12A domain NJ56_13845 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP NJ56_13845 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel NJ56_13850 IPR019672 Protein of unknown function DUF2627 NJ56_13855 IPR002059 Cold-shock protein, DNA-binding NJ56_13855 IPR011129 Cold shock protein NJ56_13855 IPR012156 Cold shock, CspA NJ56_13855 IPR012340 Nucleic acid-binding, OB-fold NJ56_13855 IPR019844 Cold-shock conserved site NJ56_13860 IPR003730 Multi-copper polyphenol oxidoreductase, laccase NJ56_13860 IPR011324 Cytotoxic necrotizing factor-like, catalytic NJ56_13860 IPR038371 NJ56_13860 NJ56_13865 IPR001460 Penicillin-binding protein, transpeptidase NJ56_13865 IPR005311 Penicillin-binding protein, dimerisation domain NJ56_13865 IPR012338 Beta-lactamase/transpeptidase-like NJ56_13865 IPR036138 NJ56_13865 NJ56_13865 IPR037532 NJ56_13865 NJ56_13870 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted NJ56_13870 IPR025714 Methyltransferase domain NJ56_13870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_13880 IPR021329 Protein of unknown function DUF2938 NJ56_13885 IPR001307 Thiosulphate sulfurtransferase, conserved site NJ56_13885 IPR001763 Rhodanese-like domain NJ56_13885 IPR001845 HTH ArsR-type DNA-binding domain NJ56_13885 IPR036388 NJ56_13885 NJ56_13885 IPR036390 NJ56_13885 NJ56_13885 IPR036873 NJ56_13885 NJ56_13890 IPR011701 Major facilitator superfamily NJ56_13890 IPR036259 NJ56_13890 NJ56_13895 IPR000873 AMP-dependent synthetase/ligase NJ56_13895 IPR001242 Condensation domain NJ56_13895 IPR009081 Acyl carrier protein-like NJ56_13895 IPR010071 Amino acid adenylation domain NJ56_13895 IPR020459 AMP-binding NJ56_13895 IPR020845 AMP-binding, conserved site NJ56_13895 IPR023213 Chloramphenicol acetyltransferase-like domain NJ56_13895 IPR025110 AMP-binding enzyme C-terminal domain NJ56_13895 IPR036736 NJ56_13895 NJ56_13900 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal NJ56_13900 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal NJ56_13900 IPR012132 Glucose-methanol-choline oxidoreductase NJ56_13900 IPR036188 NJ56_13900 NJ56_13905 IPR001031 Thioesterase NJ56_13905 IPR029058 Alpha/Beta hydrolase fold NJ56_13910 IPR006089 Acyl-CoA dehydrogenase, conserved site NJ56_13910 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NJ56_13910 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NJ56_13910 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain NJ56_13910 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NJ56_13910 IPR036250 NJ56_13910 NJ56_13910 IPR037069 NJ56_13910 NJ56_13915 IPR000182 GNAT domain NJ56_13915 IPR016181 Acyl-CoA N-acyltransferase NJ56_13920 IPR001486 Globin, truncated bacterial-like NJ56_13920 IPR009050 Globin-like NJ56_13920 IPR012292 Globin, structural domain NJ56_13925 IPR003382 Flavoprotein NJ56_13925 IPR036551 NJ56_13925 NJ56_13930 IPR003810 Domain of unknown function DUF204 NJ56_13930 IPR022929 Putative manganese efflux pump MntP NJ56_13935 IPR009328 Protein of unknown function DUF986 NJ56_13940 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component NJ56_13945 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit NJ56_13950 IPR004701 Phosphotransferase system, mannose-type IIA component NJ56_13950 IPR004720 Phosphotransferase system, sorbose subfamily IIB component NJ56_13950 IPR013789 Phosphotransferase system, mannose family IIA component NJ56_13950 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup NJ56_13950 IPR036662 NJ56_13950 NJ56_13950 IPR036667 NJ56_13950 NJ56_13955 IPR000644 CBS domain NJ56_13955 IPR005170 Transporter-associated domain NJ56_13955 IPR005496 Integral membrane protein TerC NJ56_13955 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 NJ56_13955 IPR036318 NJ56_13955 NJ56_13960 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form NJ56_13960 IPR005130 Serine dehydratase-like, alpha subunit NJ56_13960 IPR005131 Serine dehydratase beta chain NJ56_13960 IPR029009 Allosteric substrate binding domain NJ56_13965 IPR000059 NUDIX hydrolase, NudL, conserved site NJ56_13965 IPR000086 NUDIX hydrolase domain NJ56_13965 IPR015797 NUDIX hydrolase domain-like NJ56_13970 IPR005801 ADC synthase NJ56_13970 IPR005802 Para-aminobenzoate synthase, component I NJ56_13970 IPR006805 Anthranilate synthase component I, N-terminal NJ56_13970 IPR015890 Chorismate binding, C-terminal NJ56_13970 IPR019999 Anthranilate synthase component I - like NJ56_13975 IPR005371 Uncharacterised protein family UPF0181 NJ56_13980 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type NJ56_13980 IPR005862 Phosphoribosylglycinamide formyltransferase 2 NJ56_13980 IPR011054 Rudiment single hybrid motif NJ56_13980 IPR013815 ATP-grasp fold, subdomain 1 NJ56_13980 IPR016185 Pre-ATP-grasp domain NJ56_13985 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site NJ56_13985 IPR001650 Helicase, C-terminal NJ56_13985 IPR005580 DbpA, RNA-binding NJ56_13985 IPR011545 DEAD/DEAH box helicase domain NJ56_13985 IPR012677 Nucleotide-binding, alpha-beta plait NJ56_13985 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_13985 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_13985 IPR028619 ATP-dependent RNA helicase DbpA NJ56_13990 IPR009813 Uncharacterised protein family YebG NJ56_13990 IPR038627 NJ56_13990 NJ56_13995 IPR007374 ASCH domain NJ56_13995 IPR008314 Uncharacterised conserved protein UCP029143 NJ56_13995 IPR015947 PUA-like domain NJ56_14000 IPR025603 YebF/Colicin-M immunity protein NJ56_14000 IPR038703 NJ56_14000 NJ56_14005 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain NJ56_14005 IPR002470 Peptidase S9A, prolyl oligopeptidase NJ56_14005 IPR023302 Peptidase S9A, N-terminal domain NJ56_14005 IPR029058 Alpha/Beta hydrolase fold NJ56_14010 IPR012337 Ribonuclease H-like domain NJ56_14010 IPR013520 Exonuclease, RNase T/DNA polymerase III NJ56_14010 IPR036397 NJ56_14010 NJ56_14015 IPR000073 Alpha/beta hydrolase fold-1 NJ56_14015 IPR002410 Peptidase S33 NJ56_14015 IPR005944 Proline iminopeptidase NJ56_14015 IPR029058 Alpha/Beta hydrolase fold NJ56_14020 IPR009052 DNA polymerase III-theta, bacterial NJ56_14020 IPR036745 NJ56_14020 NJ56_14025 IPR008331 Ferritin/DPS protein domain NJ56_14025 IPR009078 Ferritin-like superfamily NJ56_14025 IPR012347 Ferritin-related NJ56_14030 IPR007348 CopC domain NJ56_14030 IPR014756 Immunoglobulin E-set NJ56_14035 IPR008457 Copper resistance D NJ56_14040 IPR019648 Protein of unknown function DUF2511 NJ56_14045 IPR002104 Integrase, catalytic NJ56_14045 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_14045 IPR013762 Integrase-like, catalytic core NJ56_14050 IPR001466 Beta-lactamase-related NJ56_14050 IPR001586 Beta-lactamase, class-C active site NJ56_14050 IPR012338 Beta-lactamase/transpeptidase-like NJ56_14070 IPR019689 Pseudomonas phage PaP3, Orf56 NJ56_14075 IPR005534 Curli production assembly/transport component CsgG NJ56_14080 IPR011990 Tetratricopeptide-like helical domain NJ56_14080 IPR014508 Uncharacterised conserved protein, TPR-like repeat NJ56_14085 IPR008517 Protein of unknown function DUF799 NJ56_14095 IPR007374 ASCH domain NJ56_14095 IPR009326 Protein of unknown function DUF984 NJ56_14095 IPR015947 PUA-like domain NJ56_14100 IPR009950 Protein of unknown function DUF1480 NJ56_14105 IPR000014 PAS domain NJ56_14105 IPR000160 GGDEF domain NJ56_14105 IPR001610 PAC motif NJ56_14105 IPR013655 PAS fold-3 NJ56_14105 IPR013656 PAS fold-4 NJ56_14105 IPR029787 Nucleotide cyclase NJ56_14105 IPR035965 NJ56_14105 NJ56_14110 IPR003399 Mammalian cell entry-related NJ56_14115 IPR005219 Conserved hypothetical protein CHP00155 NJ56_14115 IPR007498 Paraquat-inducible protein A NJ56_14120 IPR003018 GAF domain NJ56_14120 IPR029016 GAF domain-like NJ56_14125 IPR016103 ProQ/FinO domain NJ56_14125 IPR023529 Transporter ProP effector, ProQ NJ56_14125 IPR035236 NJ56_14125 NJ56_14125 IPR036442 NJ56_14125 NJ56_14130 IPR001478 PDZ domain NJ56_14130 IPR004447 C-terminal-processing peptidase S41A NJ56_14130 IPR005151 Tail specific protease NJ56_14130 IPR020992 Tail specific protease, C-terminal NJ56_14130 IPR029045 ClpP/crotonase-like domain NJ56_14130 IPR036034 NJ56_14130 NJ56_14135 IPR001915 Peptidase M48 NJ56_14135 IPR022919 Peptidase M48, protease HtpX, putative NJ56_14145 IPR011701 Major facilitator superfamily NJ56_14145 IPR036259 NJ56_14145 NJ56_14150 IPR005471 Transcription regulator IclR, N-terminal NJ56_14150 IPR014757 Transcription regulator IclR, C-terminal NJ56_14150 IPR029016 GAF domain-like NJ56_14150 IPR036388 NJ56_14150 NJ56_14150 IPR036390 NJ56_14150 NJ56_14155 IPR002477 Peptidoglycan binding-like NJ56_14155 IPR002502 N-acetylmuramoyl-L-alanine amidase domain NJ56_14155 IPR036365 NJ56_14155 NJ56_14155 IPR036366 NJ56_14155 NJ56_14155 IPR036505 NJ56_14155 NJ56_14160 IPR001991 Sodium:dicarboxylate symporter NJ56_14160 IPR036458 NJ56_14160 NJ56_14165 IPR007404 Protein of unknown function DUF457 NJ56_14165 IPR016956 LexA regulated metal-dependent membrane hydrolase, predicted NJ56_14170 IPR006439 HAD hydrolase, subfamily IA NJ56_14170 IPR023198 Phosphoglycolate phosphatase, domain 2 NJ56_14170 IPR023214 HAD-like domain NJ56_14170 IPR036412 NJ56_14170 NJ56_14175 IPR025229 YniB-like protein NJ56_14180 IPR011009 Protein kinase-like domain NJ56_14180 IPR016477 Fructosamine/Ketosamine-3-kinase NJ56_14185 IPR001626 ABC-3 NJ56_14185 IPR037294 NJ56_14185 NJ56_14190 IPR001626 ABC-3 NJ56_14190 IPR037294 NJ56_14190 NJ56_14195 IPR003439 ABC transporter-like NJ56_14195 IPR003593 AAA+ ATPase domain NJ56_14195 IPR017871 ABC transporter, conserved site NJ56_14195 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_14200 IPR006127 Periplasmic solute binding protein family NJ56_14200 IPR006128 Adhesion lipoprotein NJ56_14200 IPR006129 Adhesin B NJ56_14205 IPR000189 Prokaryotic transglycosylase, active site NJ56_14205 IPR008258 Lytic transglycosylase-like SLT domain NJ56_14205 IPR023346 Lysozyme-like domain NJ56_14210 IPR002771 Multiple antibiotic resistance (MarC)-related NJ56_14235 IPR025309 KTSC domain NJ56_14240 IPR012427 Protein of unknown function DUF1622 NJ56_14245 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain NJ56_14245 IPR002320 Threonine-tRNA ligase, class IIa NJ56_14245 IPR004095 TGS NJ56_14245 IPR004154 Anticodon-binding NJ56_14245 IPR012675 Beta-grasp domain NJ56_14245 IPR012676 TGS-like NJ56_14245 IPR012947 Threonyl/alanyl tRNA synthetase, SAD NJ56_14245 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain NJ56_14245 IPR036621 NJ56_14245 NJ56_14250 IPR001288 Translation initiation factor 3 NJ56_14250 IPR019813 Translation initiation factor 3, conserved site NJ56_14250 IPR019814 Translation initiation factor 3, N-terminal NJ56_14250 IPR019815 Translation initiation factor 3, C-terminal NJ56_14250 IPR036787 NJ56_14250 NJ56_14250 IPR036788 NJ56_14250 NJ56_14255 IPR001706 Ribosomal protein L35, non-mitochondrial NJ56_14255 IPR018265 Ribosomal protein L35, conserved site NJ56_14255 IPR021137 Ribosomal protein L35 NJ56_14255 IPR037229 NJ56_14255 NJ56_14260 IPR005813 Ribosomal protein L20 NJ56_14260 IPR035566 NJ56_14260 NJ56_14265 IPR002319 Phenylalanyl-tRNA synthetase NJ56_14265 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal NJ56_14265 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit NJ56_14265 IPR010978 tRNA-binding arm NJ56_14265 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial NJ56_14270 IPR002547 tRNA-binding domain NJ56_14270 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit NJ56_14270 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding NJ56_14270 IPR005146 B3/B4 tRNA-binding domain NJ56_14270 IPR005147 tRNA synthetase, B5-domain NJ56_14270 IPR009061 DNA binding domain, putative NJ56_14270 IPR012340 Nucleic acid-binding, OB-fold NJ56_14270 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 NJ56_14270 IPR036690 NJ56_14270 NJ56_14275 IPR000119 Histone-like bacterial DNA-binding protein NJ56_14275 IPR005684 Integration host factor, alpha subunit NJ56_14275 IPR010992 Integration host factor (IHF)-like DNA-binding domain NJ56_14275 IPR020816 Histone-like DNA-binding protein, conserved site NJ56_14280 IPR007829 TM2 domain NJ56_14290 IPR006531 Gp5 N-terminal NJ56_14290 IPR013046 Bacteriophage Mu/P2, baseplate assembly NJ56_14290 IPR037026 NJ56_14290 NJ56_14295 IPR003812 Fido domain NJ56_14295 IPR036597 NJ56_14295 NJ56_14305 IPR006522 Phage virion morphogensis protein NJ56_14315 IPR002104 Integrase, catalytic NJ56_14315 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_14315 IPR013762 Integrase-like, catalytic core NJ56_14320 IPR000522 ABC transporter, permease protein NJ56_14320 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC NJ56_14320 IPR037294 NJ56_14320 NJ56_14325 IPR003439 ABC transporter-like NJ56_14325 IPR003593 AAA+ ATPase domain NJ56_14325 IPR017871 ABC transporter, conserved site NJ56_14325 IPR023693 ABC transporter, vitamin B12, BtuD NJ56_14325 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_14330 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NJ56_14330 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_14330 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_14330 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_14330 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB NJ56_14335 IPR001173 Glycosyltransferase 2-like NJ56_14335 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase NJ56_14335 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_14340 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain NJ56_14340 IPR002376 Formyl transferase, N-terminal NJ56_14340 IPR005793 Formyl transferase, C-terminal NJ56_14340 IPR011034 Formyl transferase, C-terminal-like NJ56_14340 IPR021168 Bifunctional polymyxin resistance protein, ArnA NJ56_14340 IPR036291 NJ56_14340 NJ56_14340 IPR036477 NJ56_14340 NJ56_14345 IPR002509 Polysaccharide deacetylase NJ56_14345 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NJ56_14345 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable NJ56_14350 IPR003342 Glycosyl transferase, family 39 NJ56_14350 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase NJ56_14355 IPR000620 Drug/metabolite transporter NJ56_14355 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE NJ56_14360 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF NJ56_14365 IPR000064 Endopeptidase, NLPC/P60 domain NJ56_14365 IPR038765 NJ56_14365 NJ56_14370 IPR004143 Biotin/lipoate A/B protein ligase NJ56_14370 IPR004562 Lipoyltransferase/lipoate-protein ligase NJ56_14370 IPR019491 Lipoate protein ligase, C-terminal NJ56_14370 IPR023741 Lipoate-protein ligase A NJ56_14375 IPR003846 Uncharacterised protein family UPF0061 NJ56_14380 IPR003439 ABC transporter-like NJ56_14380 IPR003593 AAA+ ATPase domain NJ56_14380 IPR017871 ABC transporter, conserved site NJ56_14380 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_14385 IPR000522 ABC transporter, permease protein NJ56_14385 IPR037294 NJ56_14385 NJ56_14390 IPR002491 ABC transporter periplasmic binding domain NJ56_14395 IPR007845 Haemin-degrading HemS/ChuX domain NJ56_14400 IPR000531 TonB-dependent receptor, beta-barrel NJ56_14400 IPR010916 TonB box, conserved site NJ56_14400 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor NJ56_14400 IPR011276 TonB-dependent haem/haemoglobin receptor NJ56_14400 IPR012910 TonB-dependent receptor, plug NJ56_14400 IPR036942 NJ56_14400 NJ56_14400 IPR037066 NJ56_14400 NJ56_14405 IPR019600 Hemin uptake protein HemP NJ56_14410 IPR006218 DAHP synthetase I/KDSA NJ56_14410 IPR006219 DHAP synthase, class 1 NJ56_14410 IPR013785 Aldolase-type TIM barrel NJ56_14415 IPR005177 Bifunctional kinase-pyrophosphorylase NJ56_14415 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain NJ56_14415 IPR026530 Phosphoenolpyruvate synthase regulatory protein NJ56_14420 IPR000121 PEP-utilising enzyme, C-terminal NJ56_14420 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding NJ56_14420 IPR006319 Phosphoenolpyruvate synthase NJ56_14420 IPR008279 PEP-utilising enzyme, mobile domain NJ56_14420 IPR013815 ATP-grasp fold, subdomain 1 NJ56_14420 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain NJ56_14420 IPR018274 PEP-utilising enzyme, active site NJ56_14420 IPR023151 PEP-utilising enzyme, conserved site NJ56_14420 IPR036637 NJ56_14420 NJ56_14430 IPR002549 Uncharacterised protein family UPF0118 NJ56_14435 IPR004113 FAD-linked oxidase, C-terminal NJ56_14435 IPR006094 FAD linked oxidase, N-terminal NJ56_14435 IPR009051 Alpha-helical ferredoxin NJ56_14435 IPR016164 FAD-linked oxidase-like, C-terminal NJ56_14435 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_14435 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_14435 IPR036318 NJ56_14435 NJ56_14440 IPR003736 Phenylacetic acid degradation-related domain NJ56_14440 IPR006683 Thioesterase superfamily NJ56_14440 IPR029069 HotDog domain NJ56_14445 IPR000361 FeS cluster biogenesis NJ56_14445 IPR016092 FeS cluster insertion protein NJ56_14445 IPR017870 FeS cluster insertion, C-terminal, conserved site NJ56_14445 IPR035903 NJ56_14445 NJ56_14450 IPR000825 SUF system FeS cluster assembly, SufBD NJ56_14450 IPR010231 SUF system FeS cluster assembly, SufB NJ56_14450 IPR037284 NJ56_14450 NJ56_14455 IPR003439 ABC transporter-like NJ56_14455 IPR003593 AAA+ ATPase domain NJ56_14455 IPR010230 FeS cluster assembly SUF system, ATPase SufC NJ56_14455 IPR017871 ABC transporter, conserved site NJ56_14455 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_14460 IPR000825 SUF system FeS cluster assembly, SufBD NJ56_14460 IPR011542 SUF system FeS cluster assembly, SufD NJ56_14460 IPR037284 NJ56_14460 NJ56_14465 IPR000192 Aminotransferase class V domain NJ56_14465 IPR010970 Cysteine desulfurase, SufS NJ56_14465 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_14465 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_14465 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_14465 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site NJ56_14470 IPR003808 Fe-S metabolism associated domain, SufE-like NJ56_14470 IPR023939 Cysteine desulfuration protein SufE NJ56_14475 IPR005490 L,D-transpeptidase catalytic domain NJ56_14475 IPR038063 NJ56_14475 NJ56_14480 IPR006817 Lipoprotein leucine-zipper NJ56_14480 IPR016367 Murein-lipoprotein NJ56_14485 IPR001697 Pyruvate kinase NJ56_14485 IPR011037 Pyruvate kinase-like, insert domain NJ56_14485 IPR015793 Pyruvate kinase, barrel NJ56_14485 IPR015795 Pyruvate kinase, C-terminal NJ56_14485 IPR015806 Pyruvate kinase, beta-barrel insert domain NJ56_14485 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain NJ56_14485 IPR018209 Pyruvate kinase, active site NJ56_14485 IPR036918 NJ56_14485 NJ56_14505 IPR002528 Multi antimicrobial extrusion protein NJ56_14505 IPR022913 Multidrug resistance protein MdtK NJ56_14510 IPR001783 Lumazine-binding protein NJ56_14510 IPR017938 Riboflavin synthase-like beta-barrel NJ56_14510 IPR023366 ATP synthase subunit alpha-like domain NJ56_14510 IPR026017 Lumazine-binding domain NJ56_14515 IPR003333 Mycolic acid cyclopropane synthase NJ56_14515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_14520 IPR004812 Drug resistance transporter Bcr/CmlA subfamily NJ56_14520 IPR011701 Major facilitator superfamily NJ56_14520 IPR036259 NJ56_14520 NJ56_14525 IPR000847 Transcription regulator HTH, LysR NJ56_14525 IPR005119 LysR, substrate-binding NJ56_14525 IPR036388 NJ56_14525 NJ56_14525 IPR036390 NJ56_14525 NJ56_14530 IPR000843 Transcription regulator HTH, LacI NJ56_14530 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_14530 IPR023588 Transcription regulator HTH, PurR NJ56_14530 IPR028082 Periplasmic binding protein-like I NJ56_14540 IPR001189 Manganese/iron superoxide dismutase NJ56_14540 IPR019831 Manganese/iron superoxide dismutase, N-terminal NJ56_14540 IPR019832 Manganese/iron superoxide dismutase, C-terminal NJ56_14540 IPR019833 Manganese/iron superoxide dismutase, binding site NJ56_14540 IPR036314 NJ56_14540 NJ56_14540 IPR036324 NJ56_14540 NJ56_14545 IPR000064 Endopeptidase, NLPC/P60 domain NJ56_14545 IPR038765 NJ56_14545 NJ56_14550 IPR002109 Glutaredoxin NJ56_14550 IPR004480 Monothiol glutaredoxin-related NJ56_14550 IPR014434 Monothiol glutaredoxin NJ56_14550 IPR036249 NJ56_14550 NJ56_14555 IPR005987 Ribonuclease T NJ56_14555 IPR012337 Ribonuclease H-like domain NJ56_14555 IPR013520 Exonuclease, RNase T/DNA polymerase III NJ56_14555 IPR036397 NJ56_14555 NJ56_14560 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NJ56_14560 IPR004361 Glyoxalase I NJ56_14560 IPR018146 Glyoxalase I, conserved site NJ56_14560 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NJ56_14565 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NJ56_14565 IPR013785 Aldolase-type TIM barrel NJ56_14570 IPR001647 DNA-binding HTH domain, TetR-type NJ56_14570 IPR009057 Homeodomain-like NJ56_14570 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NJ56_14570 IPR036271 NJ56_14570 NJ56_14575 IPR000917 Sulfatase NJ56_14575 IPR012549 Domain of unknown function DUF1705 NJ56_14575 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha NJ56_14575 IPR017850 Alkaline-phosphatase-like, core domain NJ56_14580 IPR010710 Protein of unknown function DUF1289 NJ56_14585 IPR020471 Aldo/keto reductase subgroup NJ56_14585 IPR023210 NADP-dependent oxidoreductase domain NJ56_14585 IPR036812 NJ56_14585 NJ56_14595 IPR000835 MarR-type HTH domain NJ56_14595 IPR023071 Transcriptional regulator, SlyA NJ56_14595 IPR023187 Transcriptional regulator MarR-type, conserved site NJ56_14595 IPR036388 NJ56_14595 NJ56_14595 IPR036390 NJ56_14595 NJ56_14600 IPR008816 Glycine zipper 2TM domain NJ56_14605 IPR005338 Anhydro-N-acetylmuramic acid kinase NJ56_14610 IPR000659 Pyridoxamine 5'-phosphate oxidase NJ56_14610 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain NJ56_14610 IPR012349 FMN-binding split barrel NJ56_14610 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal NJ56_14610 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site NJ56_14615 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NJ56_14615 IPR002305 Aminoacyl-tRNA synthetase, class Ic NJ56_14615 IPR002307 Tyrosine-tRNA ligase NJ56_14615 IPR002942 RNA-binding S4 domain NJ56_14615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_14615 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 NJ56_14615 IPR036986 NJ56_14615 NJ56_14620 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase NJ56_14620 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase NJ56_14620 IPR023685 Pyridoxal kinase PdxY NJ56_14620 IPR029056 Ribokinase-like NJ56_14625 IPR004045 Glutathione S-transferase, N-terminal NJ56_14625 IPR004046 Glutathione S-transferase, C-terminal NJ56_14625 IPR036249 NJ56_14625 NJ56_14625 IPR036282 NJ56_14625 NJ56_14630 IPR020317 Uncharacterised protein family YjbD NJ56_14640 IPR009698 Protein of unknown function DUF1282 NJ56_14650 IPR001623 DnaJ domain NJ56_14650 IPR002939 Chaperone DnaJ, C-terminal NJ56_14650 IPR008971 HSP40/DnaJ peptide-binding NJ56_14650 IPR018253 DnaJ domain, conserved site NJ56_14650 IPR036869 NJ56_14650 NJ56_14660 IPR000109 Proton-dependent oligopeptide transporter family NJ56_14660 IPR005279 Amino acid/peptide transporter family NJ56_14660 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site NJ56_14660 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A NJ56_14660 IPR036259 NJ56_14660 NJ56_14665 IPR002347 Glucose/ribitol dehydrogenase NJ56_14665 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) NJ56_14665 IPR036291 NJ56_14665 NJ56_14670 IPR003439 ABC transporter-like NJ56_14670 IPR003593 AAA+ ATPase domain NJ56_14670 IPR017871 ABC transporter, conserved site NJ56_14670 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_14675 IPR003439 ABC transporter-like NJ56_14675 IPR003593 AAA+ ATPase domain NJ56_14675 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NJ56_14675 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_14680 IPR000515 MetI-like domain NJ56_14680 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NJ56_14680 IPR035906 NJ56_14680 NJ56_14685 IPR000515 MetI-like domain NJ56_14685 IPR035906 NJ56_14685 NJ56_14690 IPR000914 Bacterial extracellular solute-binding protein, family 5 NJ56_14690 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site NJ56_14690 IPR030678 NJ56_14690 NJ56_14700 IPR003898 Bordetella pertussis toxin A NJ56_14710 IPR002078 RNA polymerase sigma factor 54 interaction domain NJ56_14710 IPR002197 DNA binding HTH domain, Fis-type NJ56_14710 IPR003593 AAA+ ATPase domain NJ56_14710 IPR009057 Homeodomain-like NJ56_14710 IPR014317 Transcription activator PspF NJ56_14710 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NJ56_14710 IPR025944 Sigma-54 interaction domain, conserved site NJ56_14710 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_14715 IPR007157 PspA/IM30 NJ56_14715 IPR014319 Phage shock protein, PspA NJ56_14720 IPR009554 Phage shock protein, PspB NJ56_14725 IPR007168 Phage shock protein, PspC, N-terminal NJ56_14725 IPR014320 Phage shock protein, PspC NJ56_14730 IPR014321 Phage shock protein, PspD NJ56_14735 IPR007413 Protein of unknown function DUF463, YcjX-like protein NJ56_14735 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_14740 IPR006507 Uncharacterised protein family UPF0283 NJ56_14740 IPR021147 Protein of unknown function DUF697 NJ56_14745 IPR014914 RES NJ56_14750 IPR011979 Conserved hypothetical protein CHP02293 NJ56_14750 IPR024467 Domain of unknown function DUF2384 NJ56_14755 IPR000014 PAS domain NJ56_14755 IPR002078 RNA polymerase sigma factor 54 interaction domain NJ56_14755 IPR003593 AAA+ ATPase domain NJ56_14755 IPR009057 Homeodomain-like NJ56_14755 IPR013767 PAS fold NJ56_14755 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NJ56_14755 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NJ56_14755 IPR025944 Sigma-54 interaction domain, conserved site NJ56_14755 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_14755 IPR030828 NJ56_14755 NJ56_14755 IPR035965 NJ56_14755 NJ56_14760 IPR002065 Putative thiol peroxidase Tpx NJ56_14760 IPR013740 Redoxin NJ56_14760 IPR018219 Thiol peroxidase conserved site NJ56_14760 IPR036249 NJ56_14760 NJ56_14765 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NJ56_14765 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NJ56_14765 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site NJ56_14765 IPR029017 Enolase N-terminal domain-like NJ56_14765 IPR029065 Enolase C-terminal domain-like NJ56_14765 IPR036849 NJ56_14765 NJ56_14770 IPR000834 Peptidase M14, carboxypeptidase A NJ56_14775 IPR000914 Bacterial extracellular solute-binding protein, family 5 NJ56_14775 IPR030678 NJ56_14775 NJ56_14780 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB NJ56_14785 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase NJ56_14785 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA NJ56_14785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_14785 IPR035107 NJ56_14785 NJ56_14790 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain NJ56_14790 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal NJ56_14790 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II NJ56_14790 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NJ56_14790 IPR011895 Pyruvate-flavodoxin oxidoreductase NJ56_14790 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_14790 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain NJ56_14790 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain NJ56_14790 IPR029061 Thiamin diphosphate-binding fold NJ56_14790 IPR033412 NJ56_14790 NJ56_14790 IPR037112 NJ56_14790 NJ56_14795 IPR000390 Small multidrug resistance protein family NJ56_14800 IPR003416 MgtC/SapB/SrpB transporter NJ56_14805 IPR005590 Protein of unknown function DUF333 NJ56_14810 IPR005184 Domain of unknown function DUF306, Meta/HslJ NJ56_14810 IPR038670 NJ56_14810 NJ56_14815 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NJ56_14815 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NJ56_14815 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NJ56_14815 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NJ56_14815 IPR036291 NJ56_14815 NJ56_14820 IPR021730 Dicarboxylate transport NJ56_14825 IPR010499 Bacterial transcription activator, effector binding NJ56_14825 IPR011256 Regulatory factor, effector binding domain NJ56_14825 IPR029441 Integron-associated effector binding protein NJ56_14830 IPR025985 YnbE-like lipoprotein NJ56_14835 IPR008309 Uncharacterised conserved protein UCP025560 NJ56_14840 IPR003680 Flavodoxin-like fold NJ56_14840 IPR023048 NADH-azoreductase, FMN-dependent NJ56_14840 IPR029039 Flavoprotein-like NJ56_14850 IPR001650 Helicase, C-terminal NJ56_14850 IPR003593 AAA+ ATPase domain NJ56_14850 IPR007502 Helicase-associated domain NJ56_14850 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type NJ56_14850 IPR011545 DEAD/DEAH box helicase domain NJ56_14850 IPR011709 Domain of unknown function DUF1605 NJ56_14850 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_14850 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal NJ56_14850 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_14855 IPR001254 Peptidase S1 NJ56_14855 IPR008256 Peptidase S1B NJ56_14855 IPR009003 Trypsin-like cysteine/serine peptidase domain NJ56_14855 IPR018114 Peptidase S1, trypsin family, active site NJ56_14855 IPR033116 NJ56_14855 NJ56_14865 IPR005247 YbhB/YbcL NJ56_14865 IPR008914 Phosphatidylethanolamine-binding protein PEBP NJ56_14865 IPR036610 NJ56_14865 NJ56_14870 IPR009057 Homeodomain-like NJ56_14870 IPR018060 DNA binding HTH domain, AraC-type NJ56_14870 IPR018062 HTH domain AraC-type, conserved site NJ56_14875 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NJ56_14875 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NJ56_14880 IPR001424 Superoxide dismutase, copper/zinc binding domain NJ56_14880 IPR018152 Superoxide dismutase, copper/zinc, binding site NJ56_14880 IPR036423 NJ56_14880 NJ56_14885 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_14885 IPR003660 HAMP linker domain NJ56_14885 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_14885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_14885 IPR036097 NJ56_14885 NJ56_14885 IPR036890 NJ56_14885 NJ56_14890 IPR001789 Signal transduction response regulator, receiver domain NJ56_14890 IPR001867 Signal transduction response regulator, C-terminal NJ56_14890 IPR011006 CheY-like superfamily NJ56_14890 IPR036388 NJ56_14890 NJ56_14900 IPR002293 Amino acid/polyamine transporter I NJ56_14900 IPR004754 Amino acid antiporter NJ56_14905 IPR010854 Domain of unknown function DUF1471 NJ56_14905 IPR025539 YdgH protein NJ56_14905 IPR025543 Dodecin-like NJ56_14905 IPR036275 NJ56_14905 NJ56_14910 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NJ56_14910 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NJ56_14910 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 NJ56_14910 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 NJ56_14910 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal NJ56_14910 IPR026255 NAD(P) transhydrogenase, alpha subunit NJ56_14910 IPR036291 NJ56_14910 NJ56_14915 IPR012136 NADP transhydrogenase, beta subunit NJ56_14915 IPR029035 DHS-like NAD/FAD-binding domain NJ56_14915 IPR034300 NJ56_14915 NJ56_14920 IPR004560 L-ribulose-5-phosphate 3-epimerase NJ56_14920 IPR013022 Xylose isomerase-like, TIM barrel domain NJ56_14920 IPR036237 NJ56_14920 NJ56_14925 IPR001754 Orotidine 5'-phosphate decarboxylase domain NJ56_14925 IPR011060 Ribulose-phosphate binding barrel NJ56_14925 IPR013785 Aldolase-type TIM barrel NJ56_14930 IPR001303 Class II aldolase/adducin N-terminal NJ56_14930 IPR036409 NJ56_14930 NJ56_14935 IPR002178 PTS EIIA type-2 domain NJ56_14935 IPR016152 Phosphotransferase/anion transporter NJ56_14940 IPR003501 Phosphotransferase system, EIIB component, type 2/3 NJ56_14940 IPR004703 Phosphotransferase system, sugar-specific permease component NJ56_14940 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted NJ56_14940 IPR036095 NJ56_14940 NJ56_14945 IPR001034 HTH DeoR N-terminal domain NJ56_14945 IPR014036 DeoR C-terminal sensor domain NJ56_14945 IPR018356 Transcription regulator, HTH DeoR-type, conserved site NJ56_14945 IPR036390 NJ56_14945 NJ56_14945 IPR037171 NJ56_14945 NJ56_14950 IPR036866 NJ56_14950 NJ56_14955 IPR006016 UspA NJ56_14960 IPR000595 Cyclic nucleotide-binding domain NJ56_14960 IPR012318 Helix-turn-helix motif, Crp-type NJ56_14960 IPR014710 RmlC-like jelly roll fold NJ56_14960 IPR018335 Transcription regulator HTH, Crp-type, conserved site NJ56_14960 IPR018490 Cyclic nucleotide-binding-like NJ56_14960 IPR036388 NJ56_14960 NJ56_14960 IPR036390 NJ56_14960 NJ56_14965 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site NJ56_14965 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain NJ56_14965 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding NJ56_14965 IPR023546 Methylated-DNA--protein-cysteine methyltransferase NJ56_14965 IPR036217 NJ56_14965 NJ56_14965 IPR036388 NJ56_14965 NJ56_14965 IPR036631 NJ56_14965 NJ56_14970 IPR010499 Bacterial transcription activator, effector binding NJ56_14970 IPR011256 Regulatory factor, effector binding domain NJ56_14970 IPR024911 DNA gyrase inhibitor GyrI NJ56_14970 IPR029442 GyrI-like small molecule binding domain NJ56_14975 IPR007791 Heat shock protein DnaJ-like protein DjlA NJ56_14975 IPR025266 TerB, N-terminal NJ56_14975 IPR028932 TerB-C domain NJ56_14975 IPR029024 TerB-like NJ56_14980 IPR006439 HAD hydrolase, subfamily IA NJ56_14980 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB NJ56_14980 IPR023198 Phosphoglycolate phosphatase, domain 2 NJ56_14980 IPR023214 HAD-like domain NJ56_14980 IPR036412 NJ56_14980 NJ56_14990 IPR016946 Uncharacterised conserved protein UCP030125 NJ56_14995 IPR002129 Pyridoxal phosphate-dependent decarboxylase NJ56_14995 IPR010977 Aromatic-L-amino-acid decarboxylase NJ56_14995 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_14995 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_14995 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_14995 IPR021115 Pyridoxal-phosphate binding site NJ56_15000 IPR010662 Putative hydrolase RBBP9/YdeN NJ56_15000 IPR029058 Alpha/Beta hydrolase fold NJ56_15005 IPR017030 Virulence effector, SrfC NJ56_15010 IPR009216 Virulence factor SrfB NJ56_15020 IPR000845 Nucleoside phosphorylase domain NJ56_15020 IPR011271 AMP nucleosidase NJ56_15020 IPR018953 AMP nucleoside phosphorylase, N-terminal NJ56_15020 IPR035994 NJ56_15020 NJ56_15020 IPR037109 NJ56_15020 NJ56_15040 IPR007213 Leucine carboxyl methyltransferase NJ56_15040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_15045 IPR002502 N-acetylmuramoyl-L-alanine amidase domain NJ56_15045 IPR036365 NJ56_15045 NJ56_15045 IPR036366 NJ56_15045 NJ56_15045 IPR036505 NJ56_15045 NJ56_15050 IPR002347 Glucose/ribitol dehydrogenase NJ56_15050 IPR020904 Short-chain dehydrogenase/reductase, conserved site NJ56_15050 IPR036291 NJ56_15050 NJ56_15055 IPR003844 Uncharacterised protein family UPF0060 NJ56_15060 IPR009700 Protein of unknown function DUF1283 NJ56_15065 IPR010595 Protein of unknown function DUF1161 NJ56_15070 IPR001807 Chloride channel, voltage gated NJ56_15070 IPR014743 Chloride channel, core NJ56_15070 IPR023790 Chloride channel, voltage-gated, ClcB NJ56_15075 IPR004472 Dethiobiotin synthase BioD NJ56_15075 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15080 IPR000600 ROK NJ56_15080 IPR036388 NJ56_15080 NJ56_15080 IPR036390 NJ56_15080 NJ56_15085 IPR008865 DNA replication terminus site-binding protein NJ56_15085 IPR036381 NJ56_15085 NJ56_15085 IPR036384 NJ56_15085 NJ56_15090 IPR000362 Fumarate lyase family NJ56_15090 IPR005677 Fumarate hydratase, class II NJ56_15090 IPR008948 L-Aspartase-like NJ56_15090 IPR018951 Fumarase C, C-terminal NJ56_15090 IPR020557 Fumarate lyase, conserved site NJ56_15090 IPR022761 Fumarate lyase, N-terminal NJ56_15090 IPR024083 Fumarase/histidase, N-terminal NJ56_15095 IPR001250 Mannose-6-phosphate isomerase, type I NJ56_15095 IPR011051 RmlC-like cupin domain NJ56_15095 IPR014710 RmlC-like jelly roll fold NJ56_15095 IPR016305 Mannose-6-phosphate isomerase NJ56_15095 IPR018050 Phosphomannose isomerase, type I, conserved site NJ56_15100 IPR010352 Protein of unknown function DUF945 NJ56_15105 IPR001365 Adenosine/AMP deaminase domain NJ56_15105 IPR006330 Adenosine/adenine deaminase NJ56_15105 IPR006650 Adenosine/AMP deaminase active site NJ56_15105 IPR028893 Adenosine deaminase NJ56_15105 IPR032466 NJ56_15105 NJ56_15110 IPR016833 Putative sodium bile acid cotransporter NJ56_15110 IPR038770 NJ56_15110 NJ56_15115 IPR000683 Oxidoreductase, N-terminal NJ56_15115 IPR004104 Oxidoreductase, C-terminal NJ56_15115 IPR036291 NJ56_15115 NJ56_15120 IPR004537 Tellurite resistance methyltransferase, TehB NJ56_15120 IPR014431 Tellurite resistance methyltransferase, TehB type-2 NJ56_15120 IPR014710 RmlC-like jelly roll fold NJ56_15120 IPR015392 Domain of unknown function DUF1971 NJ56_15120 IPR015985 Tellurite resistance methyltransferase TehB-like domain NJ56_15120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_15125 IPR000559 Formate-tetrahydrofolate ligase, FTHFS NJ56_15125 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site NJ56_15125 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15130 IPR019690 Protein of unknown function DUF2569 NJ56_15135 IPR003667 Electron transport complex, Rnf/Nqr NJ56_15135 IPR011293 Electron transport complex, RnfA NJ56_15140 IPR007202 4Fe-4S domain NJ56_15140 IPR010207 Electron transport complex, RnfB NJ56_15140 IPR011005 Dihydropteroate synthase-like NJ56_15140 IPR016463 Electron transport complex, RnfB, Proteobacteria NJ56_15140 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_15145 IPR009051 Alpha-helical ferredoxin NJ56_15145 IPR010208 Electron transport complex protein RnfC NJ56_15145 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit NJ56_15145 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_15145 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_15145 IPR019554 Soluble ligand binding domain NJ56_15145 IPR026902 RnfC Barrel sandwich hybrid domain NJ56_15145 IPR037225 NJ56_15145 NJ56_15150 IPR009057 Homeodomain-like NJ56_15150 IPR011256 Regulatory factor, effector binding domain NJ56_15150 IPR018060 DNA binding HTH domain, AraC-type NJ56_15150 IPR020449 Transcription regulator HTH, AraC- type NJ56_15150 IPR029442 GyrI-like small molecule binding domain NJ56_15155 IPR004338 NADH-quinone reductase NQR2/RnfD NJ56_15155 IPR011303 Electron transport complex, RnfD NJ56_15160 IPR007329 FMN-binding NJ56_15160 IPR010209 Electron transport complex, RnfG NJ56_15165 IPR003667 Electron transport complex, Rnf/Nqr NJ56_15165 IPR010968 Electron transport complex, RnfE NJ56_15170 IPR000445 Helix-hairpin-helix motif NJ56_15170 IPR003265 HhH-GPD domain NJ56_15170 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif NJ56_15170 IPR004035 Endonuclease III, iron-sulphur binding site NJ56_15170 IPR004036 Endonuclease III-like, conserved site-2 NJ56_15170 IPR005759 Endonuclease III NJ56_15170 IPR011257 DNA glycosylase NJ56_15170 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NJ56_15175 IPR001900 NJ56_15175 NJ56_15175 IPR003029 Ribosomal protein S1, RNA-binding domain NJ56_15175 IPR004476 Ribonuclease II/ribonuclease R NJ56_15175 IPR011129 Cold shock protein NJ56_15175 IPR011804 Ribonuclease II NJ56_15175 IPR012340 Nucleic acid-binding, OB-fold NJ56_15175 IPR013223 Ribonuclease B, N-terminal OB domain NJ56_15175 IPR022966 Ribonuclease II/R, conserved site NJ56_15180 IPR000014 PAS domain NJ56_15180 IPR000160 GGDEF domain NJ56_15180 IPR001610 PAC motif NJ56_15180 IPR003018 GAF domain NJ56_15180 IPR013655 PAS fold-3 NJ56_15180 IPR013656 PAS fold-4 NJ56_15180 IPR029016 GAF domain-like NJ56_15180 IPR029787 Nucleotide cyclase NJ56_15180 IPR035965 NJ56_15180 NJ56_15185 IPR001585 Transaldolase NJ56_15185 IPR004731 Transaldolase 3A/3B NJ56_15185 IPR013785 Aldolase-type TIM barrel NJ56_15185 IPR018225 Transaldolase, active site NJ56_15190 IPR008816 Glycine zipper 2TM domain NJ56_15195 IPR001950 Translation initiation factor SUI1 NJ56_15195 IPR005872 Archaeal/bacterial translation initiation factor SUI1 NJ56_15195 IPR036877 NJ56_15195 NJ56_15200 IPR001754 Orotidine 5'-phosphate decarboxylase domain NJ56_15200 IPR011060 Ribulose-phosphate binding barrel NJ56_15200 IPR013785 Aldolase-type TIM barrel NJ56_15200 IPR014732 Orotidine 5'-phosphate decarboxylase NJ56_15200 IPR018089 Orotidine 5'-phosphate decarboxylase, active site NJ56_15205 IPR010854 Domain of unknown function DUF1471 NJ56_15205 IPR025543 Dodecin-like NJ56_15205 IPR036275 NJ56_15205 NJ56_15210 IPR010985 Ribbon-helix-helix NJ56_15210 IPR013321 Arc-type ribbon-helix-helix NJ56_15215 IPR011990 Tetratricopeptide-like helical domain NJ56_15215 IPR019734 Tetratricopeptide repeat NJ56_15215 IPR030865 NJ56_15215 NJ56_15220 IPR010445 Protein of unknown function DUF1049 NJ56_15220 IPR032906 NJ56_15220 NJ56_15225 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NJ56_15225 IPR036938 NJ56_15225 NJ56_15230 IPR000926 GTP cyclohydrolase II, RibA NJ56_15230 IPR032677 NJ56_15230 NJ56_15230 IPR036144 NJ56_15230 NJ56_15235 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel NJ56_15235 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha NJ56_15235 IPR006249 Aconitate/iron regulatory protein 2 NJ56_15235 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NJ56_15235 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NJ56_15235 IPR018136 Aconitase family, 4Fe-4S cluster binding site NJ56_15235 IPR036008 NJ56_15235 NJ56_15250 IPR000847 Transcription regulator HTH, LysR NJ56_15250 IPR005119 LysR, substrate-binding NJ56_15250 IPR036388 NJ56_15250 NJ56_15250 IPR036390 NJ56_15250 NJ56_15255 IPR003601 DNA topoisomerase, type IA, domain 2 NJ56_15255 IPR003602 DNA topoisomerase, type IA, DNA-binding domain NJ56_15255 IPR005733 DNA topoisomerase I, bacterial-type NJ56_15255 IPR006171 Toprim domain NJ56_15255 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type NJ56_15255 IPR013497 DNA topoisomerase, type IA, central NJ56_15255 IPR013498 DNA topoisomerase, type IA, zn finger NJ56_15255 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NJ56_15255 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 NJ56_15255 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 NJ56_15255 IPR023405 DNA topoisomerase, type IA, core domain NJ56_15255 IPR023406 DNA topoisomerase, type IA, active site NJ56_15255 IPR028612 DNA topoisomerase I, type IA NJ56_15265 IPR019633 Protein of unknown function DUF2498 NJ56_15265 IPR038191 NJ56_15265 NJ56_15270 IPR002142 Peptidase S49 NJ56_15270 IPR013703 Peptidase S49, N-terminal proteobacteria NJ56_15270 IPR029045 ClpP/crotonase-like domain NJ56_15275 IPR002347 Glucose/ribitol dehydrogenase NJ56_15275 IPR020904 Short-chain dehydrogenase/reductase, conserved site NJ56_15275 IPR036291 NJ56_15275 NJ56_15280 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR NJ56_15280 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain NJ56_15280 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15285 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F NJ56_15285 IPR002942 RNA-binding S4 domain NJ56_15285 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F NJ56_15285 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site NJ56_15285 IPR020103 Pseudouridine synthase, catalytic domain NJ56_15285 IPR036986 NJ56_15285 NJ56_15290 IPR006070 YrdC-like domain NJ56_15290 IPR017945 DHBP synthase RibB-like alpha/beta domain NJ56_15295 IPR003141 Polymerase/histidinol phosphatase, N-terminal NJ56_15295 IPR004013 PHP, C-terminal NJ56_15295 IPR016195 Polymerase/histidinol phosphatase-like NJ56_15300 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial NJ56_15300 IPR005801 ADC synthase NJ56_15300 IPR006805 Anthranilate synthase component I, N-terminal NJ56_15300 IPR015890 Chorismate binding, C-terminal NJ56_15300 IPR019999 Anthranilate synthase component I - like NJ56_15305 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain NJ56_15305 IPR017926 Glutamine amidotransferase NJ56_15305 IPR029062 Class I glutamine amidotransferase-like NJ56_15310 IPR000312 Glycosyl transferase, family 3 NJ56_15310 IPR005940 Anthranilate phosphoribosyl transferase NJ56_15310 IPR017459 Glycosyl transferase family 3, N-terminal domain NJ56_15310 IPR035902 NJ56_15310 NJ56_15310 IPR036320 NJ56_15310 NJ56_15315 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain NJ56_15315 IPR001468 Indole-3-glycerol phosphate synthase, conserved site NJ56_15315 IPR011060 Ribulose-phosphate binding barrel NJ56_15315 IPR013785 Aldolase-type TIM barrel NJ56_15315 IPR013798 Indole-3-glycerol phosphate synthase NJ56_15320 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NJ56_15320 IPR006653 Tryptophan synthase, beta chain, conserved site NJ56_15320 IPR006654 Tryptophan synthase, beta chain NJ56_15320 IPR023026 Tryptophan synthase beta chain/beta chain-like NJ56_15320 IPR036052 NJ56_15320 NJ56_15325 IPR002028 Tryptophan synthase, alpha chain NJ56_15325 IPR011060 Ribulose-phosphate binding barrel NJ56_15325 IPR013785 Aldolase-type TIM barrel NJ56_15325 IPR018204 Tryptophan synthase, alpha chain, active site NJ56_15330 IPR007055 BON domain NJ56_15330 IPR014004 Transport-associated and nodulation domain, bacteria NJ56_15335 IPR000758 Virulence-related outer membrane protein NJ56_15335 IPR005618 Outer membrane protein, OmpW NJ56_15335 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel NJ56_15340 IPR005358 Putative zinc- or iron-chelating domain containing protein NJ56_15345 IPR009627 Uncharacterised protein family UPF0259 NJ56_15350 IPR002645 STAS domain NJ56_15350 IPR011547 Sulphate transporter NJ56_15350 IPR036513 NJ56_15350 NJ56_15355 IPR006008 Intracellular septation protein A NJ56_15360 IPR006683 Thioesterase superfamily NJ56_15360 IPR029069 HotDog domain NJ56_15365 IPR003538 Gram-negative bacterial TonB protein NJ56_15365 IPR006260 TonB, C-terminal NJ56_15365 IPR037682 NJ56_15365 NJ56_15370 IPR000792 Transcription regulator LuxR, C-terminal NJ56_15370 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_15380 IPR008394 Enterobacteria AfaD invasin NJ56_15380 IPR008966 Adhesion domain NJ56_15385 IPR000015 Outer membrane usher protein NJ56_15385 IPR018030 Fimbrial membrane usher, conserved site NJ56_15385 IPR025885 PapC, N-terminal domain NJ56_15385 IPR025949 PapC-like, C-terminal domain NJ56_15385 IPR037224 NJ56_15385 NJ56_15390 IPR001829 Pili assembly chaperone, bacterial NJ56_15390 IPR008962 PapD-like NJ56_15390 IPR013783 Immunoglobulin-like fold NJ56_15390 IPR016147 PapD, N-terminal, bacterial NJ56_15390 IPR016148 Pili assembly chaperone, C-terminal domain NJ56_15390 IPR036316 NJ56_15390 NJ56_15400 IPR001867 Signal transduction response regulator, C-terminal NJ56_15400 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_15400 IPR036388 NJ56_15400 NJ56_15405 IPR031854 NJ56_15405 NJ56_15415 IPR005545 YCII-related NJ56_15415 IPR011008 Dimeric alpha-beta barrel NJ56_15420 IPR027392 Transcription factor zinc-finger NJ56_15435 IPR001736 Phospholipase D/Transphosphatidylase NJ56_15435 IPR022924 Cardiolipin synthase NJ56_15435 IPR025202 Phospholipase D-like domain NJ56_15435 IPR027379 Cardiolipin synthase N-terminal NJ56_15435 IPR030840 NJ56_15435 NJ56_15440 IPR007376 dsDNA mimic, putative NJ56_15440 IPR036763 NJ56_15440 NJ56_15445 IPR003439 ABC transporter-like NJ56_15445 IPR003593 AAA+ ATPase domain NJ56_15445 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NJ56_15445 IPR017871 ABC transporter, conserved site NJ56_15445 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15450 IPR003439 ABC transporter-like NJ56_15450 IPR003593 AAA+ ATPase domain NJ56_15450 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NJ56_15450 IPR017871 ABC transporter, conserved site NJ56_15450 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15455 IPR000515 MetI-like domain NJ56_15455 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NJ56_15455 IPR035906 NJ56_15455 NJ56_15460 IPR000515 MetI-like domain NJ56_15460 IPR035906 NJ56_15460 NJ56_15465 IPR000914 Bacterial extracellular solute-binding protein, family 5 NJ56_15465 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site NJ56_15465 IPR030678 NJ56_15465 NJ56_15470 IPR000914 Bacterial extracellular solute-binding protein, family 5 NJ56_15470 IPR030678 NJ56_15470 NJ56_15480 IPR002771 Multiple antibiotic resistance (MarC)-related NJ56_15490 IPR001670 Alcohol dehydrogenase, iron-type NJ56_15490 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase NJ56_15490 IPR015590 Aldehyde dehydrogenase domain NJ56_15490 IPR016161 Aldehyde/histidinol dehydrogenase NJ56_15490 IPR016162 Aldehyde dehydrogenase, N-terminal NJ56_15490 IPR016163 Aldehyde dehydrogenase, C-terminal NJ56_15490 IPR018211 Alcohol dehydrogenase, iron-type, conserved site NJ56_15495 IPR001267 Thymidine kinase NJ56_15495 IPR020633 Thymidine kinase, conserved site NJ56_15495 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15500 IPR001801 Histone-like protein H-NS NJ56_15500 IPR027444 Histone-like protein H-NS, C-terminal domain NJ56_15500 IPR027454 Histone-like protein H-NS family, oligomerisation domain NJ56_15500 IPR037150 NJ56_15500 NJ56_15505 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal NJ56_15505 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_15505 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation NJ56_15505 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal NJ56_15505 IPR017476 UDP-glucose/GDP-mannose dehydrogenase NJ56_15505 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type NJ56_15505 IPR036220 NJ56_15505 NJ56_15505 IPR036291 NJ56_15505 NJ56_15510 IPR001789 Signal transduction response regulator, receiver domain NJ56_15510 IPR011006 CheY-like superfamily NJ56_15510 IPR028616 Regulator of RpoS NJ56_15510 IPR036457 NJ56_15510 NJ56_15515 IPR002641 Patatin/Phospholipase A2-related NJ56_15515 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NJ56_15520 IPR004027 SEC-C motif NJ56_15520 IPR023006 Uncharacterised protein family UPF0225 NJ56_15520 IPR032710 NJ56_15520 NJ56_15525 IPR002376 Formyl transferase, N-terminal NJ56_15525 IPR002912 ACT domain NJ56_15525 IPR004810 Formyltetrahydrofolate deformylase NJ56_15525 IPR036477 NJ56_15525 NJ56_15545 IPR000847 Transcription regulator HTH, LysR NJ56_15545 IPR036388 NJ56_15545 NJ56_15545 IPR036390 NJ56_15545 NJ56_15550 IPR002196 Glycoside hydrolase, family 24 NJ56_15550 IPR023346 Lysozyme-like domain NJ56_15555 IPR004808 AP endonuclease 1 NJ56_15555 IPR005135 Endonuclease/exonuclease/phosphatase NJ56_15555 IPR020847 AP endonuclease 1, binding site NJ56_15555 IPR036691 NJ56_15555 NJ56_15560 IPR000086 NUDIX hydrolase domain NJ56_15560 IPR015797 NUDIX hydrolase domain-like NJ56_15560 IPR020476 NUDIX hydrolase NJ56_15565 IPR009971 Protein of unknown function DUF1496 NJ56_15570 IPR003601 DNA topoisomerase, type IA, domain 2 NJ56_15570 IPR003602 DNA topoisomerase, type IA, DNA-binding domain NJ56_15570 IPR005738 DNA topoisomerase III NJ56_15570 IPR006171 Toprim domain NJ56_15570 IPR013497 DNA topoisomerase, type IA, central NJ56_15570 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NJ56_15570 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 NJ56_15570 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 NJ56_15570 IPR023405 DNA topoisomerase, type IA, core domain NJ56_15570 IPR023406 DNA topoisomerase, type IA, active site NJ56_15575 IPR004536 Selenide water dikinase NJ56_15575 IPR010918 AIR synthase-related protein, C-terminal domain NJ56_15575 IPR016188 PurM, N-terminal-like NJ56_15575 IPR023061 Selenide, water dikinase, class I NJ56_15575 IPR036676 NJ56_15575 NJ56_15575 IPR036921 NJ56_15575 NJ56_15580 IPR000415 Nitroreductase-like NJ56_15580 IPR026021 Putative NAD(P)H nitroreductase YdjA-like NJ56_15580 IPR029479 Nitroreductase NJ56_15585 IPR002142 Peptidase S49 NJ56_15585 IPR004634 Peptidase S49, protease IV NJ56_15585 IPR004635 Peptidase S49, SppA NJ56_15585 IPR029045 ClpP/crotonase-like domain NJ56_15590 IPR006033 L-asparaginase, type I NJ56_15590 IPR006034 Asparaginase/glutaminase NJ56_15590 IPR020827 Asparaginase/glutaminase, active site 1 NJ56_15590 IPR027473 L-asparaginase, C-terminal domain NJ56_15590 IPR027474 L-asparaginase, N-terminal NJ56_15590 IPR027475 Asparaginase/glutaminase, active site 2 NJ56_15590 IPR036152 NJ56_15590 NJ56_15590 IPR037152 NJ56_15590 NJ56_15595 IPR000868 Isochorismatase-like NJ56_15595 IPR036380 NJ56_15595 NJ56_15600 IPR009749 Protein of unknown function DUF1315 NJ56_15605 IPR002579 Peptide methionine sulphoxide reductase MrsB NJ56_15605 IPR011057 Mss4-like NJ56_15610 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I NJ56_15610 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain NJ56_15610 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain NJ56_15610 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site NJ56_15610 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family NJ56_15610 IPR036291 NJ56_15610 NJ56_15615 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase NJ56_15615 IPR011013 Galactose mutarotase-like domain NJ56_15615 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup NJ56_15615 IPR025532 Glucose-6-phosphate 1-epimerase NJ56_15620 IPR000917 Sulfatase NJ56_15620 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha NJ56_15620 IPR017850 Alkaline-phosphatase-like, core domain NJ56_15630 IPR010583 MltA-interacting MipA NJ56_15640 IPR010650 PrkA C-terminal domain NJ56_15640 IPR013153 PrkA AAA domain NJ56_15640 IPR016230 Serine-protein kinase, PrkA NJ56_15640 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15645 IPR006698 Thermus phage phiYS40, Orf56 NJ56_15650 IPR000399 TPP-binding enzyme, conserved site NJ56_15650 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NJ56_15650 IPR012000 Thiamine pyrophosphate enzyme, central domain NJ56_15650 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain NJ56_15650 IPR012782 Acetolactate synthase, catabolic NJ56_15650 IPR029035 DHS-like NAD/FAD-binding domain NJ56_15650 IPR029061 Thiamin diphosphate-binding fold NJ56_15655 IPR005128 Alpha-acetolactate decarboxylase NJ56_15660 IPR000847 Transcription regulator HTH, LysR NJ56_15660 IPR005119 LysR, substrate-binding NJ56_15660 IPR036388 NJ56_15660 NJ56_15660 IPR036390 NJ56_15660 NJ56_15665 IPR000014 PAS domain NJ56_15665 IPR000160 GGDEF domain NJ56_15665 IPR001610 PAC motif NJ56_15665 IPR001633 EAL domain NJ56_15665 IPR003018 GAF domain NJ56_15665 IPR012226 Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase NJ56_15665 IPR013655 PAS fold-3 NJ56_15665 IPR029016 GAF domain-like NJ56_15665 IPR029787 Nucleotide cyclase NJ56_15665 IPR035919 NJ56_15665 NJ56_15665 IPR035965 NJ56_15665 NJ56_15675 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG NJ56_15675 IPR004812 Drug resistance transporter Bcr/CmlA subfamily NJ56_15675 IPR005829 Sugar transporter, conserved site NJ56_15675 IPR011701 Major facilitator superfamily NJ56_15675 IPR036259 NJ56_15675 NJ56_15680 IPR000821 Alanine racemase NJ56_15680 IPR001608 Alanine racemase, N-terminal NJ56_15680 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NJ56_15680 IPR011079 Alanine racemase, C-terminal NJ56_15680 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site NJ56_15680 IPR029066 PLP-binding barrel NJ56_15685 IPR006076 FAD dependent oxidoreductase NJ56_15685 IPR023080 D-amino acid dehydrogenase small subunit, DadA NJ56_15685 IPR036188 NJ56_15685 NJ56_15690 IPR007390 Sporulation stage V, protein R NJ56_15695 IPR000524 Transcription regulator HTH, GntR NJ56_15695 IPR008920 Transcription regulator FadR/GntR, C-terminal NJ56_15695 IPR014178 Fatty acid response transcription factor FadR NJ56_15695 IPR028374 FadR, C-terminal domain NJ56_15695 IPR036388 NJ56_15695 NJ56_15695 IPR036390 NJ56_15695 NJ56_15700 IPR004671 Na+/H+ antiporter NhaB NJ56_15705 IPR003752 Disulphide bond formation protein DsbB/BdbC NJ56_15705 IPR022920 Disulphide bond formation protein DsbB NJ56_15705 IPR023380 Disulphide bond formation protein DsbB-like domain NJ56_15720 IPR005358 Putative zinc- or iron-chelating domain containing protein NJ56_15720 IPR008228 Uncharacterised conserved protein UCP006173 NJ56_15725 IPR011234 Fumarylacetoacetase, C-terminal-related NJ56_15725 IPR036663 NJ56_15725 NJ56_15730 IPR027354 YcgL domain NJ56_15730 IPR038068 NJ56_15730 NJ56_15735 IPR005526 Septum formation inhibitor MinC, C-terminal NJ56_15735 IPR007874 Septum formation inhibitor MinC, N-terminal NJ56_15735 IPR013033 Septum formation inhibitor MinC NJ56_15735 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal NJ56_15735 IPR036145 NJ56_15735 NJ56_15735 IPR038061 NJ56_15735 NJ56_15740 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NJ56_15740 IPR010223 ATP binding protein MinD, bacterial-type NJ56_15740 IPR025501 ATP binding protein MinD NJ56_15740 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15745 IPR005527 Septum formation topological specificity factor MinE NJ56_15745 IPR036707 NJ56_15745 NJ56_15750 IPR002121 HRDC domain NJ56_15750 IPR002562 3'-5' exonuclease domain NJ56_15750 IPR006292 Ribonuclease D NJ56_15750 IPR010997 HRDC-like NJ56_15750 IPR012337 Ribonuclease H-like domain NJ56_15750 IPR036397 NJ56_15750 NJ56_15755 IPR000873 AMP-dependent synthetase/ligase NJ56_15755 IPR020845 AMP-binding, conserved site NJ56_15755 IPR025110 AMP-binding enzyme C-terminal domain NJ56_15760 IPR004658 Outer membrane lipoprotein Slp NJ56_15765 IPR000905 Gcp-like domain NJ56_15765 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ NJ56_15770 IPR006555 ATP-dependent helicase, C-terminal NJ56_15770 IPR010614 DEAD2 NJ56_15770 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15775 IPR006175 YjgF/Yer057p/UK114 family NJ56_15775 IPR019897 YjgF-like protein, conserved site NJ56_15775 IPR035959 NJ56_15775 NJ56_15780 IPR000390 Small multidrug resistance protein family NJ56_15780 IPR023737 Spermidine export protein MdtI NJ56_15785 IPR000390 Small multidrug resistance protein family NJ56_15785 IPR023740 Spermidine export protein MdtJ NJ56_15790 IPR000887 KDPG/KHG aldolase NJ56_15790 IPR013785 Aldolase-type TIM barrel NJ56_15790 IPR031337 NJ56_15790 NJ56_15790 IPR031338 NJ56_15790 NJ56_15795 IPR001282 Glucose-6-phosphate dehydrogenase NJ56_15795 IPR019796 Glucose-6-phosphate dehydrogenase, active site NJ56_15795 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding NJ56_15795 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal NJ56_15795 IPR036291 NJ56_15795 NJ56_15800 IPR000281 Helix-turn-helix protein RpiR NJ56_15800 IPR001347 Sugar isomerase (SIS) NJ56_15800 IPR009057 Homeodomain-like NJ56_15800 IPR036388 NJ56_15800 NJ56_15805 IPR001697 Pyruvate kinase NJ56_15805 IPR011037 Pyruvate kinase-like, insert domain NJ56_15805 IPR015793 Pyruvate kinase, barrel NJ56_15805 IPR015795 Pyruvate kinase, C-terminal NJ56_15805 IPR015806 Pyruvate kinase, beta-barrel insert domain NJ56_15805 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain NJ56_15805 IPR018209 Pyruvate kinase, active site NJ56_15805 IPR036918 NJ56_15805 NJ56_15810 IPR004960 Bacterial lipid A biosynthesis acyltransferase NJ56_15810 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase NJ56_15815 IPR007340 Opacity-associated protein A NJ56_15815 IPR011055 Duplicated hybrid motif NJ56_15815 IPR013731 Opacity-associated protein A, N-terminal NJ56_15815 IPR016047 Peptidase M23 NJ56_15815 IPR018392 LysM domain NJ56_15820 IPR006127 Periplasmic solute binding protein family NJ56_15825 IPR003439 ABC transporter-like NJ56_15825 IPR003593 AAA+ ATPase domain NJ56_15825 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15830 IPR001626 ABC-3 NJ56_15830 IPR037294 NJ56_15830 NJ56_15835 IPR000109 Proton-dependent oligopeptide transporter family NJ56_15835 IPR005279 Amino acid/peptide transporter family NJ56_15835 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site NJ56_15835 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B NJ56_15835 IPR036259 NJ56_15835 NJ56_15840 IPR003593 AAA+ ATPase domain NJ56_15840 IPR004605 DNA helicase, Holliday junction RuvB type NJ56_15840 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal NJ56_15840 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal NJ56_15840 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_15840 IPR036388 NJ56_15840 NJ56_15840 IPR036390 NJ56_15840 NJ56_15845 IPR000085 Bacterial DNA recombination protein RuvA NJ56_15845 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 NJ56_15845 IPR010994 RuvA domain 2-like NJ56_15845 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal NJ56_15845 IPR012340 Nucleic acid-binding, OB-fold NJ56_15845 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial NJ56_15845 IPR036267 NJ56_15845 NJ56_15850 IPR002176 Crossover junction endodeoxyribonuclease RuvC NJ56_15850 IPR012337 Ribonuclease H-like domain NJ56_15850 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site NJ56_15850 IPR036397 NJ56_15850 NJ56_15855 IPR002876 Transcriptional regulator TACO1-like NJ56_15855 IPR017856 Integrase, N-terminal zinc-binding domain-like NJ56_15855 IPR026564 Transcriptional regulator TACO1-like, domain 3 NJ56_15855 IPR029072 YebC-like NJ56_15860 IPR000086 NUDIX hydrolase domain NJ56_15860 IPR003564 dATP pyrophosphohydrolase NJ56_15860 IPR015797 NUDIX hydrolase domain-like NJ56_15860 IPR020084 NUDIX hydrolase, conserved site NJ56_15865 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb NJ56_15865 IPR004115 GAD-like domain NJ56_15865 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) NJ56_15865 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type NJ56_15865 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type NJ56_15865 IPR012340 Nucleic acid-binding, OB-fold NJ56_15865 IPR029351 GAD domain NJ56_15870 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain NJ56_15875 IPR002763 Protein of unknown function DUF72 NJ56_15875 IPR036520 NJ56_15875 NJ56_15880 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein NJ56_15880 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain NJ56_15885 IPR005271 tRNA (cmo5U34)-methyltransferase NJ56_15885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_15890 IPR010017 tRNA (mo5U34)-methyltransferase NJ56_15890 IPR027555 tRNA (mo5U34)-methyltransferase-like NJ56_15890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_15895 IPR005627 Copper homeostasis protein CutC NJ56_15895 IPR023648 Copper homeostasis CutC domain NJ56_15895 IPR036822 NJ56_15895 NJ56_15900 IPR010393 Protein of unknown function DUF991 NJ56_15900 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NJ56_15905 IPR001278 Arginine-tRNA ligase NJ56_15905 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NJ56_15905 IPR005148 Arginyl tRNA synthetase N-terminal domain NJ56_15905 IPR008909 DALR anticodon binding NJ56_15905 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding NJ56_15905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_15905 IPR035684 NJ56_15905 NJ56_15905 IPR036695 NJ56_15905 NJ56_15910 IPR022231 Protein of unknown function DUF3757 NJ56_15915 IPR008638 Filamentous haemagglutinin, N-terminal NJ56_15915 IPR011050 Pectin lyase fold/virulence factor NJ56_15915 IPR012334 Pectin lyase fold NJ56_15915 IPR025157 Haemagluttinin repeat NJ56_15920 IPR005565 Haemolysin activator HlyB NJ56_15920 IPR013686 Polypeptide-transport-associated, ShlB-type NJ56_15920 IPR027282 Two partner secretion pathway transporter NJ56_15920 IPR035251 NJ56_15920 NJ56_15925 IPR004268 Flagellin assembly, membrane protein MviN NJ56_15930 IPR000683 Oxidoreductase, N-terminal NJ56_15930 IPR036291 NJ56_15930 NJ56_15935 IPR007432 Protein of unknown function DUF480 NJ56_15935 IPR036388 NJ56_15935 NJ56_15935 IPR036390 NJ56_15935 NJ56_15940 IPR000182 GNAT domain NJ56_15940 IPR016181 Acyl-CoA N-acyltransferase NJ56_15945 IPR011701 Major facilitator superfamily NJ56_15945 IPR022855 Multidrug resistance protein MdtH NJ56_15945 IPR036259 NJ56_15945 NJ56_15950 IPR007138 Antibiotic biosynthesis monooxygenase-like domain NJ56_15950 IPR011008 Dimeric alpha-beta barrel NJ56_15955 IPR010835 Protein of unknown function DUF1439 NJ56_15960 IPR020945 DMSO/Nitrate reductase chaperone NJ56_15960 IPR026269 Tat proofreading chaperone DmsD-type NJ56_15960 IPR036411 NJ56_15960 NJ56_15965 IPR003141 Polymerase/histidinol phosphatase, N-terminal NJ56_15965 IPR004013 PHP, C-terminal NJ56_15965 IPR016195 Polymerase/histidinol phosphatase-like NJ56_15965 IPR023710 Probable phosphatase YcdX NJ56_15970 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NJ56_15970 IPR036291 NJ56_15970 NJ56_15975 IPR000109 Proton-dependent oligopeptide transporter family NJ56_15975 IPR005279 Amino acid/peptide transporter family NJ56_15975 IPR036259 NJ56_15975 NJ56_15985 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain NJ56_15985 IPR030395 NJ56_15985 NJ56_15995 IPR000160 GGDEF domain NJ56_15995 IPR029787 Nucleotide cyclase NJ56_16000 IPR001902 Sulphate anion transporter NJ56_16000 IPR002645 STAS domain NJ56_16000 IPR011547 Sulphate transporter NJ56_16000 IPR018045 Sulphate anion transporter, conserved site NJ56_16000 IPR036513 NJ56_16000 NJ56_16005 IPR006218 DAHP synthetase I/KDSA NJ56_16005 IPR006269 3-deoxy-8-phosphooctulonate synthase NJ56_16005 IPR013785 Aldolase-type TIM barrel NJ56_16010 IPR011990 Tetratricopeptide-like helical domain NJ56_16010 IPR032698 NJ56_16010 NJ56_16015 IPR007360 Invasion gene expression up-regulator, SirB NJ56_16020 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_16020 IPR004556 Modification methylase HemK NJ56_16020 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific NJ56_16020 IPR025714 Methyltransferase domain NJ56_16020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_16025 IPR000352 Peptide chain release factor class I/class II NJ56_16025 IPR004373 Peptide chain release factor 1 NJ56_16025 IPR005139 Peptide chain release factor NJ56_16030 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase NJ56_16030 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase NJ56_16030 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal NJ56_16030 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain NJ56_16030 IPR018214 Glutamyl-tRNA reductase, conserved site NJ56_16030 IPR036291 NJ56_16030 NJ56_16030 IPR036343 NJ56_16030 NJ56_16030 IPR036453 NJ56_16030 NJ56_16035 IPR004565 Outer membrane lipoprotein LolB NJ56_16035 IPR029046 Lipoprotein localisation LolA/LolB/LppX NJ56_16040 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase NJ56_16040 IPR006204 GHMP kinase N-terminal domain NJ56_16040 IPR013750 GHMP kinase, C-terminal domain NJ56_16040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_16040 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_16040 IPR036554 NJ56_16040 NJ56_16045 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site NJ56_16045 IPR005946 Ribose-phosphate diphosphokinase NJ56_16045 IPR029057 Phosphoribosyltransferase-like NJ56_16045 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain NJ56_16045 IPR037515 NJ56_16045 NJ56_16050 IPR019698 Protein of unknown function DUF2583 NJ56_16055 IPR001328 Peptidyl-tRNA hydrolase NJ56_16055 IPR018171 Peptidyl-tRNA hydrolase, conserved site NJ56_16055 IPR036416 NJ56_16055 NJ56_16065 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 NJ56_16065 IPR006073 GTP binding domain NJ56_16065 IPR012675 Beta-grasp domain NJ56_16065 IPR012676 TGS-like NJ56_16065 IPR013029 Domain of unknown function DUF933 NJ56_16065 IPR023192 TGS-like domain NJ56_16065 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16075 IPR002078 RNA polymerase sigma factor 54 interaction domain NJ56_16075 IPR003018 GAF domain NJ56_16075 IPR003593 AAA+ ATPase domain NJ56_16075 IPR009057 Homeodomain-like NJ56_16075 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NJ56_16075 IPR025944 Sigma-54 interaction domain, conserved site NJ56_16075 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16075 IPR029016 GAF domain-like NJ56_16080 IPR010918 AIR synthase-related protein, C-terminal domain NJ56_16080 IPR011854 Hydrogenase expression/formation protein HypE NJ56_16080 IPR016188 PurM, N-terminal-like NJ56_16080 IPR036676 NJ56_16080 NJ56_16080 IPR036921 NJ56_16080 NJ56_16085 IPR002780 Hydrogenase formation HypD protein NJ56_16090 IPR001109 Hydrogenase expression/formation protein, HupF/HypC NJ56_16090 IPR019812 Hydrogenase assembly chaperone, conserved site NJ56_16090 IPR037254 NJ56_16090 NJ56_16095 IPR003495 CobW/HypB/UreG domain NJ56_16095 IPR004392 Hydrogenase accessory protein HypB NJ56_16095 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase NJ56_16095 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16100 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF NJ56_16100 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site NJ56_16105 IPR021285 Transcription regulator, HycA NJ56_16110 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_16110 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_16115 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase NJ56_16115 IPR003918 NADH:ubiquinone oxidoreductase NJ56_16120 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H NJ56_16120 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site NJ56_16125 IPR001135 NADH-quinone oxidoreductase, subunit D NJ56_16125 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit NJ56_16125 IPR001501 Nickel-dependent hydrogenase, large subunit NJ56_16125 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site NJ56_16125 IPR029014 NiFe hydrogenase-like NJ56_16125 IPR037232 NJ56_16125 NJ56_16125 IPR038290 NJ56_16125 NJ56_16130 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_16130 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_16135 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit NJ56_16135 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit NJ56_16140 IPR010005 Formate hydrogenlyase maturation HycH NJ56_16145 IPR000671 Peptidase A31 family NJ56_16145 IPR004420 Peptidase A31, hydrogenase maturation protease HycI NJ56_16145 IPR023430 Peptidase HybD-like domain NJ56_16150 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NJ56_16150 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NJ56_16155 IPR006478 Formate dehydrogenase, alpha subunit NJ56_16155 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site NJ56_16155 IPR006656 Molybdopterin oxidoreductase NJ56_16155 IPR006657 Molydopterin dinucleotide-binding domain NJ56_16155 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain NJ56_16155 IPR009010 Aspartate decarboxylase-like domain NJ56_16160 IPR001792 Acylphosphatase-like domain NJ56_16160 IPR004421 Carbamoyltransferase, HypF-type NJ56_16160 IPR006070 YrdC-like domain NJ56_16160 IPR011125 Zinc finger, HypF-type NJ56_16160 IPR017945 DHBP synthase RibB-like alpha/beta domain NJ56_16160 IPR036046 NJ56_16160 NJ56_16165 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria NJ56_16165 IPR011541 Nickel/cobalt transporter, high-affinity NJ56_16170 IPR006070 YrdC-like domain NJ56_16170 IPR017945 DHBP synthase RibB-like alpha/beta domain NJ56_16175 IPR000847 Transcription regulator HTH, LysR NJ56_16175 IPR005119 LysR, substrate-binding NJ56_16175 IPR036388 NJ56_16175 NJ56_16175 IPR036390 NJ56_16175 NJ56_16180 IPR010282 Uncharacterised protein family HutD/Ves NJ56_16180 IPR011051 RmlC-like cupin domain NJ56_16180 IPR014710 RmlC-like jelly roll fold NJ56_16185 IPR006680 Amidohydrolase 1 NJ56_16185 IPR010252 Formiminoglutamate deiminase NJ56_16185 IPR011059 Metal-dependent hydrolase, composite domain NJ56_16185 IPR032466 NJ56_16185 NJ56_16190 IPR000524 Transcription regulator HTH, GntR NJ56_16190 IPR010248 Histidine utilization repressor NJ56_16190 IPR011663 UbiC transcription regulator-associated NJ56_16190 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NJ56_16190 IPR036388 NJ56_16190 NJ56_16190 IPR036390 NJ56_16190 NJ56_16195 IPR005920 Imidazolonepropionase NJ56_16195 IPR006680 Amidohydrolase 1 NJ56_16195 IPR011059 Metal-dependent hydrolase, composite domain NJ56_16195 IPR032466 NJ56_16195 NJ56_16200 IPR007709 N-formylglutamate amidohydrolase NJ56_16200 IPR010247 N-formylglutamate deformylase NJ56_16205 IPR001702 Porin, Gram-negative type NJ56_16205 IPR001897 Porin, gammaproteobacterial NJ56_16205 IPR023614 Porin domain NJ56_16210 IPR007036 Succinylglutamate desuccinylase/aspartoacylase NJ56_16210 IPR016681 Succinylglutamate desuccinylase NJ56_16215 IPR007079 Succinylarginine dihydrolase NJ56_16215 IPR037031 NJ56_16215 NJ56_16220 IPR015590 Aldehyde dehydrogenase domain NJ56_16220 IPR016160 Aldehyde dehydrogenase, cysteine active site NJ56_16220 IPR016161 Aldehyde/histidinol dehydrogenase NJ56_16220 IPR016162 Aldehyde dehydrogenase, N-terminal NJ56_16220 IPR016163 Aldehyde dehydrogenase, C-terminal NJ56_16220 IPR017649 Succinylglutamic semialdehyde dehydrogenase NJ56_16220 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NJ56_16225 IPR007041 Arginine N-succinyltransferase Ast/AOST NJ56_16225 IPR016181 Acyl-CoA N-acyltransferase NJ56_16225 IPR017650 Arginine N-succinyltransferase AstA NJ56_16230 IPR004636 Acetylornithine/Succinylornithine transaminase family NJ56_16230 IPR005814 Aminotransferase class-III NJ56_16230 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_16230 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_16230 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_16230 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria NJ56_16235 IPR000524 Transcription regulator HTH, GntR NJ56_16235 IPR004839 Aminotransferase, class I/classII NJ56_16235 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_16235 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_16235 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_16235 IPR036388 NJ56_16235 NJ56_16235 IPR036390 NJ56_16235 NJ56_16240 IPR002585 Cytochrome d ubiquinol oxidase, subunit I NJ56_16245 IPR003317 Cytochrome d ubiquinol oxidase, subunit II NJ56_16250 IPR018895 Protein of unknown function DUF2474 NJ56_16255 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_16255 IPR003660 HAMP linker domain NJ56_16255 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain NJ56_16255 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing NJ56_16255 IPR029095 NarX-like, N-terminal NJ56_16255 IPR036890 NJ56_16255 NJ56_16260 IPR007037 Siderophore-interacting protein NJ56_16260 IPR013113 FAD-binding 9, siderophore-interacting NJ56_16260 IPR017938 Riboflavin synthase-like beta-barrel NJ56_16260 IPR039261 NJ56_16260 NJ56_16265 IPR004713 Calcium/proton exchanger NJ56_16265 IPR004837 Sodium/calcium exchanger membrane region NJ56_16270 IPR003714 PhoH-like protein NJ56_16270 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16275 IPR009057 Homeodomain-like NJ56_16275 IPR018060 DNA binding HTH domain, AraC-type NJ56_16275 IPR018062 HTH domain AraC-type, conserved site NJ56_16280 IPR000620 Drug/metabolite transporter NJ56_16290 IPR003423 Outer membrane efflux protein NJ56_16290 IPR010130 Type I secretion outer membrane protein, TolC NJ56_16295 IPR003997 RTX secretion protein D, Gram-negative bacteria NJ56_16295 IPR006143 RND efflux pump, membrane fusion protein NJ56_16295 IPR006144 Secretion protein HlyD, conserved site NJ56_16295 IPR010129 Type I secretion membrane fusion protein, HlyD NJ56_16295 IPR032317 NJ56_16295 NJ56_16300 IPR003439 ABC transporter-like NJ56_16300 IPR003593 AAA+ ATPase domain NJ56_16300 IPR010128 ATPase, type I secretion system, PrtD NJ56_16300 IPR011527 ABC transporter type 1, transmembrane domain NJ56_16300 IPR017871 ABC transporter, conserved site NJ56_16300 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16300 IPR036640 NJ56_16300 NJ56_16305 IPR003086 Metalloprotease inhibitor I38 NJ56_16305 IPR016085 Protease inhibitor, beta-barrel domain NJ56_16305 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 NJ56_16305 IPR022815 Protease inhibitor I38 NJ56_16310 IPR006026 Peptidase, metallopeptidase NJ56_16310 IPR011049 Serralysin-like metalloprotease, C-terminal NJ56_16310 IPR013858 Peptidase M10 serralysin C-terminal domain NJ56_16310 IPR016294 Peptidase M10B NJ56_16310 IPR018511 Hemolysin-type calcium-binding conserved site NJ56_16310 IPR024079 Metallopeptidase, catalytic domain NJ56_16315 IPR001898 Sodium/sulphate symporter NJ56_16315 IPR030676 NJ56_16315 NJ56_16320 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_16320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_16320 IPR013767 PAS fold NJ56_16320 IPR029151 Periplasmic sensor domain-like NJ56_16320 IPR033463 NJ56_16320 NJ56_16320 IPR035965 NJ56_16320 NJ56_16320 IPR036890 NJ56_16320 NJ56_16320 IPR039506 NJ56_16320 NJ56_16325 IPR001789 Signal transduction response regulator, receiver domain NJ56_16325 IPR011006 CheY-like superfamily NJ56_16325 IPR024187 Signal transduction response regulator, citrate/malate metabolism NJ56_16330 IPR004679 2-hydroxycarboxylate transporter NJ56_16335 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_16335 IPR004090 Chemotaxis methyl-accepting receptor NJ56_16340 IPR001567 Peptidase M3A/M3B NJ56_16340 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NJ56_16345 IPR001360 Glycoside hydrolase, family 1 NJ56_16345 IPR017853 Glycoside hydrolase, superfamily NJ56_16345 IPR018120 Glycoside hydrolase, family 1, active site NJ56_16345 IPR033132 NJ56_16345 NJ56_16350 IPR001690 Autoinducer synthesis protein NJ56_16350 IPR016181 Acyl-CoA N-acyltransferase NJ56_16350 IPR018311 Autoinducer synthesis, conserved site NJ56_16355 IPR000792 Transcription regulator LuxR, C-terminal NJ56_16355 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NJ56_16355 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_16355 IPR036388 NJ56_16355 NJ56_16355 IPR036693 NJ56_16355 NJ56_16360 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic NJ56_16360 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site NJ56_16360 IPR024084 Isopropylmalate dehydrogenase-like domain NJ56_16365 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F NJ56_16365 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F NJ56_16365 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site NJ56_16365 IPR020103 Pseudouridine synthase, catalytic domain NJ56_16370 IPR000086 NUDIX hydrolase domain NJ56_16370 IPR015797 NUDIX hydrolase domain-like NJ56_16370 IPR020084 NUDIX hydrolase, conserved site NJ56_16370 IPR020476 NUDIX hydrolase NJ56_16375 IPR004506 tRNA-specific 2-thiouridylase NJ56_16375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_16375 IPR023382 Adenine nucleotide alpha hydrolase-like domains NJ56_16380 IPR007451 Uncharacterised protein family UPF0274 NJ56_16380 IPR035932 NJ56_16380 NJ56_16385 IPR000362 Fumarate lyase family NJ56_16385 IPR004769 Adenylosuccinate lyase NJ56_16385 IPR008948 L-Aspartase-like NJ56_16385 IPR013539 Adenylosuccinate lyase PurB, C-terminal NJ56_16385 IPR020557 Fumarate lyase, conserved site NJ56_16385 IPR022761 Fumarate lyase, N-terminal NJ56_16385 IPR024083 Fumarase/histidase, N-terminal NJ56_16390 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel NJ56_16390 IPR027385 Outer membrane protein beta-barrel NJ56_16395 IPR001789 Signal transduction response regulator, receiver domain NJ56_16395 IPR001867 Signal transduction response regulator, C-terminal NJ56_16395 IPR011006 CheY-like superfamily NJ56_16395 IPR036388 NJ56_16395 NJ56_16400 IPR003594 Histidine kinase-like ATPase, C-terminal domain NJ56_16400 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain NJ56_16400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NJ56_16400 IPR015014 PhoQ Sensor NJ56_16400 IPR036097 NJ56_16400 NJ56_16400 IPR036890 NJ56_16400 NJ56_16400 IPR038429 NJ56_16400 NJ56_16405 IPR003347 JmjC domain NJ56_16410 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site NJ56_16410 IPR002933 Peptidase M20 NJ56_16410 IPR010161 Peptidase M20B, tripeptide aminopeptidase NJ56_16410 IPR011650 Peptidase M20, dimerisation domain NJ56_16410 IPR036264 NJ56_16410 NJ56_16415 IPR003000 Sirtuin family NJ56_16415 IPR026591 Sirtuin family, catalytic core small domain NJ56_16415 IPR027546 Sirtuin, class III NJ56_16415 IPR029035 DHS-like NAD/FAD-binding domain NJ56_16420 IPR000600 ROK NJ56_16420 IPR023505 N-acetyl-D-glucosamine kinase NJ56_16425 IPR003838 Permease FtsX-like NJ56_16425 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family NJ56_16425 IPR011926 Lipoprotein releasing system, transmembrane protein LolE NJ56_16425 IPR025857 MacB-like periplasmic core domain NJ56_16430 IPR003439 ABC transporter-like NJ56_16430 IPR003593 AAA+ ATPase domain NJ56_16430 IPR011924 Lipoprotein releasing system, ATP-binding protein NJ56_16430 IPR017871 ABC transporter, conserved site NJ56_16430 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16435 IPR003838 Permease FtsX-like NJ56_16435 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family NJ56_16435 IPR025857 MacB-like periplasmic core domain NJ56_16445 IPR001650 Helicase, C-terminal NJ56_16445 IPR003711 CarD-like/TRCF domain NJ56_16445 IPR004576 Transcription-repair coupling factor NJ56_16445 IPR005118 Transcription-repair-coupling factor, C-terminal domain NJ56_16445 IPR011545 DEAD/DEAH box helicase domain NJ56_16445 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_16445 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16445 IPR036101 NJ56_16445 NJ56_16445 IPR037235 NJ56_16445 NJ56_16450 IPR008816 Glycine zipper 2TM domain NJ56_16455 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain NJ56_16455 IPR036188 NJ56_16455 NJ56_16460 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA NJ56_16460 IPR022987 Uncharacterised protein family UPF0227 NJ56_16460 IPR029058 Alpha/Beta hydrolase fold NJ56_16465 IPR001764 Glycoside hydrolase, family 3, N-terminal NJ56_16465 IPR017853 Glycoside hydrolase, superfamily NJ56_16465 IPR019800 Glycoside hydrolase, family 3, active site NJ56_16465 IPR022956 Beta-hexosaminidase, bacterial NJ56_16465 IPR036962 NJ56_16465 NJ56_16470 IPR002575 Aminoglycoside phosphotransferase NJ56_16470 IPR011009 Protein kinase-like domain NJ56_16470 IPR014093 Thiamine kinase NJ56_16475 IPR014094 Penicillin-binding protein activator LpoB NJ56_16480 IPR010824 Protein of unknown function DUF1425 NJ56_16480 IPR038483 NJ56_16480 NJ56_16485 IPR001310 Histidine triad (HIT) protein NJ56_16485 IPR019808 Histidine triad, conserved site NJ56_16485 IPR036265 NJ56_16485 NJ56_16490 IPR001996 Phosphotransferase system, IIB component, type 1 NJ56_16490 IPR003352 Phosphotransferase system, EIIC NJ56_16490 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component NJ56_16490 IPR011299 PTS system glucose-specific IIBC component NJ56_16490 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site NJ56_16490 IPR036878 NJ56_16490 NJ56_16495 IPR001130 TatD family NJ56_16495 IPR015991 Uncharacterised deoxyribonuclease TatD-type NJ56_16495 IPR018228 Deoxyribonuclease, TatD-related, conserved site NJ56_16495 IPR032466 NJ56_16495 NJ56_16500 IPR004622 DNA polymerase III, delta prime subunit NJ56_16500 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal NJ56_16500 IPR015199 DNA polymerase III, delta subunit, C-terminal NJ56_16500 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16505 IPR018094 Thymidylate kinase NJ56_16505 IPR018095 Thymidylate kinase, conserved site NJ56_16505 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16505 IPR039430 NJ56_16505 NJ56_16510 IPR003770 Uncharacterised protein family UPF0755, YceG-like NJ56_16515 IPR001544 Aminotransferase, class IV NJ56_16515 IPR017824 Aminodeoxychorismate lyase, class IV NJ56_16515 IPR018300 Aminotransferase, class IV, conserved site NJ56_16515 IPR036038 NJ56_16515 NJ56_16520 IPR014030 Beta-ketoacyl synthase, N-terminal NJ56_16520 IPR014031 Beta-ketoacyl synthase, C-terminal NJ56_16520 IPR016039 Thiolase-like NJ56_16520 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 NJ56_16520 IPR018201 Beta-ketoacyl synthase, active site NJ56_16520 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NJ56_16525 IPR003231 Acyl carrier protein (ACP) NJ56_16525 IPR006162 Phosphopantetheine attachment site NJ56_16525 IPR009081 Acyl carrier protein-like NJ56_16525 IPR036736 NJ56_16525 NJ56_16530 IPR002347 Glucose/ribitol dehydrogenase NJ56_16530 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NJ56_16530 IPR020904 Short-chain dehydrogenase/reductase, conserved site NJ56_16530 IPR036291 NJ56_16530 NJ56_16535 IPR001227 Acyl transferase domain NJ56_16535 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type NJ56_16535 IPR014043 Acyl transferase NJ56_16535 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NJ56_16535 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding NJ56_16535 IPR020801 Polyketide synthase, acyl transferase domain NJ56_16535 IPR024925 Malonyl CoA-acyl carrier protein transacylase NJ56_16540 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 NJ56_16540 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal NJ56_16540 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NJ56_16540 IPR016039 Thiolase-like NJ56_16545 IPR003664 Fatty acid synthesis PlsX protein NJ56_16545 IPR012281 Phospholipid biosynthesis protein, PlsX-like NJ56_16550 IPR002677 Ribosomal protein L32p NJ56_16550 IPR011332 Zinc-binding ribosomal protein NJ56_16555 IPR003772 Protein of unknown function DUF177 NJ56_16560 IPR003697 Maf-like protein NJ56_16560 IPR029001 Inosine triphosphate pyrophosphatase-like NJ56_16565 IPR002942 RNA-binding S4 domain NJ56_16565 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F NJ56_16565 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NJ56_16565 IPR006225 Pseudouridine synthase, RluC/RluD NJ56_16565 IPR020103 Pseudouridine synthase, catalytic domain NJ56_16565 IPR036986 NJ56_16565 NJ56_16575 IPR003029 Ribosomal protein S1, RNA-binding domain NJ56_16575 IPR004659 Ribonuclease E/G NJ56_16575 IPR012340 Nucleic acid-binding, OB-fold NJ56_16575 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G NJ56_16575 IPR021968 Polyribonucleotide phosphorylase C-terminal NJ56_16575 IPR022967 RNA-binding domain, S1 NJ56_16575 IPR028878 Ribonuclease E NJ56_16580 IPR036691 NJ56_16580 NJ56_16585 IPR007138 Antibiotic biosynthesis monooxygenase-like domain NJ56_16585 IPR011008 Dimeric alpha-beta barrel NJ56_16590 IPR002195 Dihydroorotase, conserved site NJ56_16590 IPR004721 Dihydroorotase homodimeric type NJ56_16590 IPR006680 Amidohydrolase 1 NJ56_16590 IPR032466 NJ56_16590 NJ56_16595 IPR010391 DNA damage-inducible protein DinI-like NJ56_16595 IPR036687 NJ56_16595 NJ56_16600 IPR025730 Biofilm regulator BssS NJ56_16605 IPR006076 FAD dependent oxidoreductase NJ56_16605 IPR023493 N-methyl-L-tryptophan oxidase MTOX NJ56_16605 IPR036188 NJ56_16605 NJ56_16610 IPR000792 Transcription regulator LuxR, C-terminal NJ56_16610 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_16610 IPR036388 NJ56_16610 NJ56_16615 IPR002549 Uncharacterised protein family UPF0118 NJ56_16620 IPR001763 Rhodanese-like domain NJ56_16620 IPR020936 Uncharacterised protein family UPF0176 NJ56_16620 IPR022111 Protein of unknown function DUF3650 NJ56_16620 IPR036873 NJ56_16620 NJ56_16625 IPR004960 Bacterial lipid A biosynthesis acyltransferase NJ56_16625 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase NJ56_16630 IPR005545 YCII-related NJ56_16630 IPR011008 Dimeric alpha-beta barrel NJ56_16635 IPR000109 Proton-dependent oligopeptide transporter family NJ56_16635 IPR005279 Amino acid/peptide transporter family NJ56_16635 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site NJ56_16635 IPR036259 NJ56_16635 NJ56_16640 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NJ56_16640 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NJ56_16645 IPR001173 Glycosyltransferase 2-like NJ56_16645 IPR023725 Glucan biosynthesis glucosyltransferase H NJ56_16645 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_16650 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal NJ56_16650 IPR011013 Galactose mutarotase-like domain NJ56_16650 IPR013783 Immunoglobulin-like fold NJ56_16650 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D NJ56_16650 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup NJ56_16650 IPR014756 Immunoglobulin E-set NJ56_16650 IPR023704 Glucan biosynthesis protein G NJ56_16655 IPR002656 Acyltransferase 3 NJ56_16655 IPR023723 Glucan biosynthesis protein C NJ56_16665 IPR005170 Transporter-associated domain NJ56_16665 IPR006037 Regulator of K+ conductance, C-terminal NJ56_16665 IPR006153 Cation/H+ exchanger NJ56_16665 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 NJ56_16665 IPR023729 K(+)/H(+) antiporter NhaP2 NJ56_16665 IPR036318 NJ56_16665 NJ56_16665 IPR036721 NJ56_16665 NJ56_16665 IPR038770 NJ56_16665 NJ56_16670 IPR001765 Carbonic anhydrase NJ56_16670 IPR036874 NJ56_16670 NJ56_16680 IPR007453 Sulphur transfer protein DsrC/TusE NJ56_16680 IPR025526 DsrC-like domain NJ56_16685 IPR001792 Acylphosphatase-like domain NJ56_16685 IPR017968 Acylphosphatase, conserved site NJ56_16685 IPR028627 Acylphosphatase, bacteria NJ56_16685 IPR036046 NJ56_16685 NJ56_16690 IPR002478 PUA domain NJ56_16690 IPR015947 PUA-like domain NJ56_16690 IPR019614 S-adenosylmethionine-dependent methyltransferase NJ56_16690 IPR023542 rRNA large subunit methyltransferase I NJ56_16690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_16690 IPR036974 NJ56_16690 NJ56_16695 IPR011722 Hemimethylated DNA-binding domain NJ56_16695 IPR022866 Heat shock protein HspQ NJ56_16695 IPR036623 NJ56_16695 NJ56_16700 IPR003781 CoA-binding NJ56_16700 IPR036291 NJ56_16700 NJ56_16705 IPR018635 Uncharacterised protein family UPF0319 NJ56_16710 IPR004363 Methylglyoxal synthase NJ56_16710 IPR011607 Methylglyoxal synthase-like domain NJ56_16710 IPR018148 Methylglyoxal synthase, active site NJ56_16710 IPR036914 NJ56_16710 NJ56_16715 IPR014017 DNA helicase, UvrD-like, C-terminal NJ56_16715 IPR022161 DNA helicase IV, N-terminal domain NJ56_16715 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16715 IPR034739 NJ56_16715 NJ56_16720 IPR005185 Protein of unknown function DUF307 NJ56_16720 IPR031308 NJ56_16720 NJ56_16725 IPR010019 Integral membrane protein, YccS NJ56_16725 IPR010020 Integral membrane protein, YccS/YhfK NJ56_16725 IPR032692 NJ56_16725 NJ56_16730 IPR007076 TfoX, N-terminal NJ56_16730 IPR007077 TfoX, C-terminal NJ56_16730 IPR026256 Transcriptional regulator, TfoX/Sxy-type NJ56_16735 IPR004596 Cell division suppressor protein, SulA NJ56_16735 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16740 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain NJ56_16740 IPR002368 Outer membrane protein, OmpA NJ56_16740 IPR006664 Outer membrane protein, bacterial NJ56_16740 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal NJ56_16740 IPR006690 Outer membrane protein, OmpA-like, conserved site NJ56_16740 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel NJ56_16740 IPR036737 NJ56_16740 NJ56_16745 IPR009390 Macrodomain Ter protein, MatP NJ56_16745 IPR013321 Arc-type ribbon-helix-helix NJ56_16745 IPR035087 NJ56_16745 NJ56_16745 IPR035375 NJ56_16745 NJ56_16745 IPR038339 NJ56_16745 NJ56_16750 IPR008269 Peptidase S16, Lon C-terminal NJ56_16750 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NJ56_16750 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_16755 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA NJ56_16755 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ NJ56_16755 IPR029069 HotDog domain NJ56_16760 IPR007040 Ribosome modulation factor NJ56_16760 IPR023200 Ribosome modulation factor-like domain NJ56_16765 IPR005586 Protein of unknown function DUF330 NJ56_16770 IPR003399 Mammalian cell entry-related NJ56_16775 IPR005219 Conserved hypothetical protein CHP00155 NJ56_16775 IPR007498 Paraquat-inducible protein A NJ56_16780 IPR003439 ABC transporter-like NJ56_16780 IPR003593 AAA+ ATPase domain NJ56_16780 IPR017871 ABC transporter, conserved site NJ56_16780 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16780 IPR032524 NJ56_16780 NJ56_16780 IPR032781 NJ56_16780 NJ56_16780 IPR037118 NJ56_16780 NJ56_16785 IPR000241 Putative RNA methylase domain NJ56_16785 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NJ56_16785 IPR004114 THUMP NJ56_16785 IPR017244 Ribosomal RNA large subunit methyltransferase K/L NJ56_16785 IPR019614 S-adenosylmethionine-dependent methyltransferase NJ56_16785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_16790 IPR001041 2Fe-2S ferredoxin-type domain NJ56_16790 IPR005302 Molybdenum cofactor sulfurase, C-terminal NJ56_16790 IPR005303 MOSC, N-terminal beta barrel NJ56_16790 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NJ56_16790 IPR011037 Pyruvate kinase-like, insert domain NJ56_16790 IPR012675 Beta-grasp domain NJ56_16790 IPR036010 NJ56_16790 NJ56_16795 IPR009809 Cell division protein ZapC NJ56_16800 IPR001295 Dihydroorotate dehydrogenase, conserved site NJ56_16800 IPR005719 Dihydroorotate dehydrogenase, class 2 NJ56_16800 IPR005720 Dihydroorotate dehydrogenase domain NJ56_16800 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 NJ56_16800 IPR013785 Aldolase-type TIM barrel NJ56_16805 IPR012779 Peptidase M1, alanyl aminopeptidase NJ56_16805 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal NJ56_16805 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal NJ56_16805 IPR027268 NJ56_16805 NJ56_16805 IPR035414 NJ56_16805 NJ56_16805 IPR037144 NJ56_16805 NJ56_16805 IPR038438 NJ56_16805 NJ56_16810 IPR006406 Nicotinate phosphoribosyltransferase NJ56_16810 IPR007229 Nicotinate phosphoribosyltransferase family NJ56_16810 IPR036068 NJ56_16810 NJ56_16815 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb NJ56_16815 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) NJ56_16815 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type NJ56_16815 IPR004522 Asparagine-tRNA ligase NJ56_16815 IPR012340 Nucleic acid-binding, OB-fold NJ56_16820 IPR001702 Porin, Gram-negative type NJ56_16820 IPR001897 Porin, gammaproteobacterial NJ56_16820 IPR013793 Porin, Gram-negative type, conserved site NJ56_16820 IPR023614 Porin domain NJ56_16825 IPR000796 Aspartate/other aminotransferase NJ56_16825 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site NJ56_16825 IPR004839 Aminotransferase, class I/classII NJ56_16825 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_16825 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_16825 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_16830 IPR001279 Beta-lactamase-like NJ56_16830 IPR036866 NJ56_16830 NJ56_16835 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NJ56_16835 IPR010275 Protein of unknown function DUF882 NJ56_16840 IPR002477 Peptidoglycan binding-like NJ56_16840 IPR005490 L,D-transpeptidase catalytic domain NJ56_16840 IPR036365 NJ56_16840 NJ56_16840 IPR036366 NJ56_16840 NJ56_16840 IPR038063 NJ56_16840 NJ56_16845 IPR007406 MukB, N-terminal domain NJ56_16845 IPR012090 Chromosome partition protein MukB NJ56_16845 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16845 IPR032520 NJ56_16845 NJ56_16850 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE NJ56_16855 IPR005582 Chromosome partition protein MukF NJ56_16855 IPR033439 NJ56_16855 NJ56_16855 IPR033440 NJ56_16855 NJ56_16855 IPR033441 NJ56_16855 NJ56_16855 IPR036141 NJ56_16855 NJ56_16855 IPR036388 NJ56_16855 NJ56_16855 IPR036390 NJ56_16855 NJ56_16855 IPR038198 NJ56_16855 NJ56_16860 IPR025714 Methyltransferase domain NJ56_16860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_16860 IPR033664 NJ56_16860 NJ56_16865 IPR003848 Domain of unknown function DUF218 NJ56_16870 IPR002575 Aminoglycoside phosphotransferase NJ56_16870 IPR011009 Protein kinase-like domain NJ56_16875 IPR003329 Acylneuraminate cytidylyltransferase NJ56_16875 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase NJ56_16875 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_16880 IPR005651 Uncharacterised protein family UPF0434/Trm112 NJ56_16880 IPR038053 NJ56_16880 NJ56_16885 IPR002059 Cold-shock protein, DNA-binding NJ56_16885 IPR011129 Cold shock protein NJ56_16885 IPR012156 Cold shock, CspA NJ56_16885 IPR012340 Nucleic acid-binding, OB-fold NJ56_16890 IPR002059 Cold-shock protein, DNA-binding NJ56_16890 IPR011129 Cold shock protein NJ56_16890 IPR012156 Cold shock, CspA NJ56_16890 IPR012340 Nucleic acid-binding, OB-fold NJ56_16890 IPR019844 Cold-shock conserved site NJ56_16895 IPR009770 Domain of unknown function DUF1338 NJ56_16900 IPR003758 Tetraacyldisaccharide 4'-kinase NJ56_16900 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16905 IPR003439 ABC transporter-like NJ56_16905 IPR003593 AAA+ ATPase domain NJ56_16905 IPR011527 ABC transporter type 1, transmembrane domain NJ56_16905 IPR011917 ABC transporter, lipid A export, MsbA NJ56_16905 IPR017871 ABC transporter, conserved site NJ56_16905 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16905 IPR036640 NJ56_16905 NJ56_16910 IPR001279 Beta-lactamase-like NJ56_16910 IPR004477 ComEC/Rec2-related protein NJ56_16910 IPR004797 Competence protein ComEC/Rec2 NJ56_16910 IPR025405 Domain of unknown function DUF4131 NJ56_16910 IPR036866 NJ56_16910 NJ56_16915 IPR000119 Histone-like bacterial DNA-binding protein NJ56_16915 IPR005685 Integration host factor, beta subunit NJ56_16915 IPR010992 Integration host factor (IHF)-like DNA-binding domain NJ56_16915 IPR020816 Histone-like DNA-binding protein, conserved site NJ56_16920 IPR000110 Ribosomal protein S1 NJ56_16920 IPR003029 Ribosomal protein S1, RNA-binding domain NJ56_16920 IPR012340 Nucleic acid-binding, OB-fold NJ56_16920 IPR022967 RNA-binding domain, S1 NJ56_16925 IPR003136 Cytidylate kinase NJ56_16925 IPR011994 Cytidylate kinase domain NJ56_16925 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16930 IPR001986 Enolpyruvate transferase domain NJ56_16930 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase NJ56_16930 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta NJ56_16930 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site NJ56_16930 IPR036968 NJ56_16930 NJ56_16935 IPR000192 Aminotransferase class V domain NJ56_16935 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_16935 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_16935 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_16935 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site NJ56_16935 IPR022278 Phosphoserine aminotransferase NJ56_16940 IPR004550 L-asparaginase, type II NJ56_16940 IPR006034 Asparaginase/glutaminase NJ56_16940 IPR020827 Asparaginase/glutaminase, active site 1 NJ56_16940 IPR027473 L-asparaginase, C-terminal domain NJ56_16940 IPR027474 L-asparaginase, N-terminal NJ56_16940 IPR027475 Asparaginase/glutaminase, active site 2 NJ56_16940 IPR036152 NJ56_16940 NJ56_16940 IPR037152 NJ56_16940 NJ56_16945 IPR003776 YcaO-like domain NJ56_16950 IPR000292 Formate/nitrite transporter NJ56_16950 IPR023271 Aquaporin-like NJ56_16950 IPR023999 Formate transporter FocA, putative NJ56_16950 IPR024002 Formate/nitrite transporter, conserved site NJ56_16955 IPR001150 Glycine radical domain NJ56_16955 IPR004184 Pyruvate formate lyase domain NJ56_16955 IPR005949 Formate acetyltransferase NJ56_16955 IPR019777 Formate C-acetyltransferase glycine radical, conserved site NJ56_16960 IPR001989 Radical-activating enzyme, conserved site NJ56_16960 IPR007197 Radical SAM NJ56_16960 IPR012838 Pyruvate formate-lyase activating enzyme NJ56_16960 IPR012839 Glycyl radical enzyme activase NJ56_16960 IPR013785 Aldolase-type TIM barrel NJ56_16965 IPR011701 Major facilitator superfamily NJ56_16965 IPR023745 MSF-type transporter, YcaD NJ56_16965 IPR036259 NJ56_16965 NJ56_16970 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain NJ56_16970 IPR002317 Serine-tRNA ligase, type1 NJ56_16970 IPR010978 tRNA-binding arm NJ56_16970 IPR015866 Serine-tRNA synthetase, type1, N-terminal NJ56_16975 IPR003593 AAA+ ATPase domain NJ56_16975 IPR003959 ATPase, AAA-type, core NJ56_16975 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal NJ56_16975 IPR021886 MgsA AAA+ ATPase C-terminal NJ56_16975 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16975 IPR032423 NJ56_16975 NJ56_16980 IPR004564 Outer membrane lipoprotein carrier protein LolA-like NJ56_16980 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria NJ56_16980 IPR029046 Lipoprotein localisation LolA/LolB/LppX NJ56_16985 IPR002543 FtsK domain NJ56_16985 IPR018541 FtsK gamma domain NJ56_16985 IPR025199 Domain of unknown function DUF4117 NJ56_16985 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_16985 IPR036388 NJ56_16985 NJ56_16985 IPR036390 NJ56_16985 NJ56_16990 IPR000485 AsnC-type HTH domain NJ56_16990 IPR011008 Dimeric alpha-beta barrel NJ56_16990 IPR019887 Transcription regulator AsnC-type, C-terminal NJ56_16990 IPR019888 Transcription regulator AsnC-type NJ56_16990 IPR036388 NJ56_16990 NJ56_16990 IPR036390 NJ56_16990 NJ56_16995 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II NJ56_16995 IPR005982 Thioredoxin reductase NJ56_16995 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site NJ56_16995 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain NJ56_16995 IPR036188 NJ56_16995 NJ56_17000 IPR003439 ABC transporter-like NJ56_17000 IPR003593 AAA+ ATPase domain NJ56_17000 IPR011527 ABC transporter type 1, transmembrane domain NJ56_17000 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD NJ56_17000 IPR017871 ABC transporter, conserved site NJ56_17000 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17000 IPR036640 NJ56_17000 NJ56_17005 IPR003439 ABC transporter-like NJ56_17005 IPR003593 AAA+ ATPase domain NJ56_17005 IPR011527 ABC transporter type 1, transmembrane domain NJ56_17005 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC NJ56_17005 IPR017871 ABC transporter, conserved site NJ56_17005 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17005 IPR036640 NJ56_17005 NJ56_17010 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase NJ56_17010 IPR016181 Acyl-CoA N-acyltransferase NJ56_17015 IPR004368 Translation initiation factor IF-1 NJ56_17015 IPR006196 RNA-binding domain, S1, IF1 type NJ56_17015 IPR012340 Nucleic acid-binding, OB-fold NJ56_17015 IPR022967 RNA-binding domain, S1 NJ56_17020 IPR001270 ClpA/B family NJ56_17020 IPR003593 AAA+ ATPase domain NJ56_17020 IPR003959 ATPase, AAA-type, core NJ56_17020 IPR004176 Clp, N-terminal NJ56_17020 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA NJ56_17020 IPR018368 ClpA/B, conserved site 1 NJ56_17020 IPR019489 Clp ATPase, C-terminal NJ56_17020 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17020 IPR028299 ClpA/B, conserved site 2 NJ56_17020 IPR036628 NJ56_17020 NJ56_17025 IPR003769 Adaptor protein ClpS, core NJ56_17025 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NJ56_17025 IPR022935 ATP-dependent Clp protease adaptor protein ClpS NJ56_17030 IPR002059 Cold-shock protein, DNA-binding NJ56_17030 IPR011129 Cold shock protein NJ56_17030 IPR012156 Cold shock, CspA NJ56_17030 IPR012340 Nucleic acid-binding, OB-fold NJ56_17030 IPR012751 CspD, cold shock NJ56_17030 IPR019844 Cold-shock conserved site NJ56_17035 IPR003439 ABC transporter-like NJ56_17035 IPR003593 AAA+ ATPase domain NJ56_17035 IPR003838 Permease FtsX-like NJ56_17035 IPR017871 ABC transporter, conserved site NJ56_17035 IPR025857 MacB-like periplasmic core domain NJ56_17035 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17040 IPR006143 RND efflux pump, membrane fusion protein NJ56_17040 IPR032317 NJ56_17040 NJ56_17045 IPR007488 Protein of unknown function DUF535 NJ56_17050 IPR022602 Protein of unknown function DUF2813 NJ56_17050 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17055 IPR005642 Protein of unknown function DUF340, prokaryotic membrane NJ56_17060 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase NJ56_17060 IPR010048 Hydroxylamine reductase NJ56_17060 IPR011254 Prismane-like NJ56_17060 IPR016099 Prismane-like, alpha/beta-sandwich NJ56_17060 IPR016100 Prismane, alpha-bundle NJ56_17065 IPR001041 2Fe-2S ferredoxin-type domain NJ56_17065 IPR001433 Oxidoreductase FAD/NAD(P)-binding NJ56_17065 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NJ56_17065 IPR001834 NADH:cytochrome b5 reductase (CBR) NJ56_17065 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NJ56_17065 IPR008333 Oxidoreductase, FAD-binding domain NJ56_17065 IPR012675 Beta-grasp domain NJ56_17065 IPR017938 Riboflavin synthase-like beta-barrel NJ56_17065 IPR036010 NJ56_17065 NJ56_17065 IPR039261 NJ56_17065 NJ56_17070 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase NJ56_17070 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_17070 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_17070 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_17070 IPR023603 Threonine aldolase NJ56_17075 IPR016040 NAD(P)-binding domain NJ56_17075 IPR021295 Protein of unknown function DUF2867 NJ56_17075 IPR036291 NJ56_17075 NJ56_17080 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain NJ56_17080 IPR036291 NJ56_17080 NJ56_17085 IPR002765 Uncharacterised protein family UPF0145 NJ56_17085 IPR035439 NJ56_17085 NJ56_17090 IPR024289 Domain of unknown function DUF3828 NJ56_17095 IPR003439 ABC transporter-like NJ56_17095 IPR003593 AAA+ ATPase domain NJ56_17095 IPR017871 ABC transporter, conserved site NJ56_17095 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17095 IPR030679 NJ56_17095 NJ56_17100 IPR001320 Ionotropic glutamate receptor NJ56_17100 IPR001638 Extracellular solute-binding protein, family 3 NJ56_17100 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein NJ56_17100 IPR018313 Extracellular solute-binding protein, family 3, conserved site NJ56_17105 IPR000515 MetI-like domain NJ56_17105 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family NJ56_17105 IPR035906 NJ56_17105 NJ56_17110 IPR000515 MetI-like domain NJ56_17110 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family NJ56_17110 IPR035906 NJ56_17110 NJ56_17115 IPR001320 Ionotropic glutamate receptor NJ56_17115 IPR001638 Extracellular solute-binding protein, family 3 NJ56_17115 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein NJ56_17115 IPR018313 Extracellular solute-binding protein, family 3, conserved site NJ56_17120 IPR010280 (Uracil-5)-methyltransferase family NJ56_17120 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC NJ56_17120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_17120 IPR030390 NJ56_17120 NJ56_17120 IPR030391 NJ56_17120 NJ56_17125 IPR019703 Protein of unknown function DUF2593 NJ56_17130 IPR000515 MetI-like domain NJ56_17130 IPR035906 NJ56_17130 NJ56_17135 IPR000515 MetI-like domain NJ56_17135 IPR035906 NJ56_17135 NJ56_17140 IPR003439 ABC transporter-like NJ56_17140 IPR003593 AAA+ ATPase domain NJ56_17140 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit NJ56_17140 IPR008995 Molybdate/tungstate binding, C-terminal NJ56_17140 IPR013611 Transport-associated OB, type 2 NJ56_17140 IPR017871 ABC transporter, conserved site NJ56_17140 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17145 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein NJ56_17145 IPR006059 Bacterial extracellular solute-binding, family 1 NJ56_17150 IPR019660 Putative sensory transduction regulator YbjN NJ56_17155 IPR010815 Protein of unknown function DUF1418 NJ56_17160 IPR002109 Glutaredoxin NJ56_17160 IPR011767 Glutaredoxin active site NJ56_17160 IPR011902 Glutaredoxin, GrxA NJ56_17160 IPR014025 Glutaredoxin subgroup NJ56_17160 IPR036249 NJ56_17160 NJ56_17165 IPR006037 Regulator of K+ conductance, C-terminal NJ56_17165 IPR006512 YidE/YbjL duplication NJ56_17165 IPR023017 Transport protein YbjL, putative NJ56_17165 IPR036721 NJ56_17165 NJ56_17170 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NJ56_17170 IPR036938 NJ56_17170 NJ56_17175 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NJ56_17175 IPR036938 NJ56_17175 NJ56_17180 IPR002915 DeoC/FbaB/ lacD aldolase NJ56_17180 IPR011343 Deoxyribose-phosphate aldolase NJ56_17180 IPR013785 Aldolase-type TIM barrel NJ56_17180 IPR028581 Deoxyribose-phosphate aldolase type I NJ56_17185 IPR001034 HTH DeoR N-terminal domain NJ56_17185 IPR014036 DeoR C-terminal sensor domain NJ56_17185 IPR018356 Transcription regulator, HTH DeoR-type, conserved site NJ56_17185 IPR037171 NJ56_17185 NJ56_17190 IPR004694 Hydroxy amino acid transporter NJ56_17195 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form NJ56_17195 IPR005130 Serine dehydratase-like, alpha subunit NJ56_17195 IPR005131 Serine dehydratase beta chain NJ56_17195 IPR029009 Allosteric substrate binding domain NJ56_17200 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal NJ56_17200 IPR012338 Beta-lactamase/transpeptidase-like NJ56_17200 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal NJ56_17200 IPR015956 Penicillin-binding protein-associated NJ56_17200 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A NJ56_17200 IPR037167 NJ56_17200 NJ56_17205 IPR000644 CBS domain NJ56_17205 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site NJ56_17205 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NJ56_17205 IPR036052 NJ56_17205 NJ56_17210 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme NJ56_17210 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_17210 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_17210 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_17215 IPR005123 Oxoglutarate/iron-dependent dioxygenase NJ56_17215 IPR026992 Non-haem dioxygenase N-terminal domain NJ56_17215 IPR027443 Isopenicillin N synthase-like NJ56_17220 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial NJ56_17220 IPR023214 HAD-like domain NJ56_17220 IPR036412 NJ56_17220 NJ56_17225 IPR004045 Glutathione S-transferase, N-terminal NJ56_17225 IPR004046 Glutathione S-transferase, C-terminal NJ56_17225 IPR036249 NJ56_17225 NJ56_17225 IPR036282 NJ56_17225 NJ56_17230 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain NJ56_17230 IPR036291 NJ56_17230 NJ56_17235 IPR011322 Nitrogen regulatory PII-like, alpha/beta NJ56_17235 IPR013115 Histidine biosynthesis HisG, C-terminal NJ56_17235 IPR013820 ATP phosphoribosyltransferase, catalytic domain NJ56_17235 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NJ56_17235 IPR018198 ATP phosphoribosyltransferase, conserved site NJ56_17235 IPR020621 ATP phosphoribosyltransferase HisG, long form NJ56_17240 IPR001692 Histidinol dehydrogenase, conserved site NJ56_17240 IPR012131 Histidinol dehydrogenase NJ56_17240 IPR016161 Aldehyde/histidinol dehydrogenase NJ56_17240 IPR022695 Histidinol dehydrogenase, monofunctional NJ56_17245 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site NJ56_17245 IPR004839 Aminotransferase, class I/classII NJ56_17245 IPR005861 Histidinol-phosphate aminotransferase family NJ56_17245 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_17245 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_17245 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_17250 IPR000807 Imidazoleglycerol-phosphate dehydratase NJ56_17250 IPR005954 Histidinol-phosphatase NJ56_17250 IPR006543 Histidinol-phosphate phosphatase NJ56_17250 IPR006549 HAD-superfamily hydrolase,subfamily IIIA NJ56_17250 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site NJ56_17250 IPR020566 Histidine biosynthesis bifunctional protein HisB NJ56_17250 IPR020568 Ribosomal protein S5 domain 2-type fold NJ56_17250 IPR023214 HAD-like domain NJ56_17250 IPR036412 NJ56_17250 NJ56_17250 IPR038494 NJ56_17250 NJ56_17255 IPR010139 Imidazole glycerol phosphate synthase, subunit H NJ56_17255 IPR017926 Glutamine amidotransferase NJ56_17255 IPR029062 Class I glutamine amidotransferase-like NJ56_17260 IPR006062 Histidine biosynthesis NJ56_17260 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA NJ56_17260 IPR011060 Ribulose-phosphate binding barrel NJ56_17260 IPR013785 Aldolase-type TIM barrel NJ56_17260 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase NJ56_17265 IPR004651 Histidine biosynthesis, HisF NJ56_17265 IPR006062 Histidine biosynthesis NJ56_17265 IPR011060 Ribulose-phosphate binding barrel NJ56_17265 IPR013785 Aldolase-type TIM barrel NJ56_17270 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain NJ56_17270 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase NJ56_17270 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like NJ56_17270 IPR023019 Histidine biosynthesis bifunctional protein HisIE NJ56_17270 IPR038019 NJ56_17270 NJ56_17275 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating NJ56_17275 IPR006114 6-phosphogluconate dehydrogenase, C-terminal NJ56_17275 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding NJ56_17275 IPR006183 NJ56_17275 NJ56_17275 IPR006184 6-phosphogluconate-binding site NJ56_17275 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like NJ56_17275 IPR013328 Dehydrogenase, multihelical NJ56_17275 IPR036291 NJ56_17275 NJ56_17280 IPR005835 Nucleotidyl transferase NJ56_17280 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_17285 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type NJ56_17285 IPR005835 Nucleotidyl transferase NJ56_17285 IPR029044 Nucleotide-diphospho-sugar transferases NJ56_17290 IPR000644 CBS domain NJ56_17290 IPR005170 Transporter-associated domain NJ56_17290 IPR005496 Integral membrane protein TerC NJ56_17290 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 NJ56_17290 IPR036318 NJ56_17290 NJ56_17295 IPR004669 C4-dicarboxylate anaerobic carrier NJ56_17295 IPR018385 C4-dicarboxylate anaerobic carrier-like NJ56_17300 IPR007844 AsmA NJ56_17305 IPR011962 Deoxycytidine triphosphate deaminase NJ56_17305 IPR029054 dUTPase-like NJ56_17305 IPR036157 NJ56_17305 NJ56_17310 IPR000764 Uridine kinase like NJ56_17310 IPR006083 Phosphoribulokinase/uridine kinase NJ56_17310 IPR026008 Uridine kinase NJ56_17310 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17315 IPR000808 Mrp, conserved site NJ56_17315 IPR019591 Mrp/NBP35 ATP-binding protein NJ56_17315 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17315 IPR033756 NJ56_17315 NJ56_17315 IPR034904 NJ56_17315 NJ56_17320 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NJ56_17320 IPR002547 tRNA-binding domain NJ56_17320 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal NJ56_17320 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding NJ56_17320 IPR012340 Nucleic acid-binding, OB-fold NJ56_17320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NJ56_17320 IPR014758 Methionyl-tRNA synthetase NJ56_17320 IPR015413 Methionyl/Leucyl tRNA synthetase NJ56_17320 IPR023458 Methionine-tRNA ligase, type 1 NJ56_17320 IPR029038 Methionyl-tRNA synthetase, Zn-domain NJ56_17320 IPR033911 NJ56_17320 NJ56_17330 IPR005538 LrgA/CidA family NJ56_17330 IPR022957 Uncharacterised protein family UPF0299 NJ56_17335 IPR005261 Conserved hypothetical protein CHP00659 NJ56_17335 IPR007300 CidB/LrgB family NJ56_17340 IPR002125 CMP/dCMP deaminase, zinc-binding NJ56_17340 IPR006263 Cytidine deaminase, homodimeric NJ56_17340 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain NJ56_17340 IPR016192 APOBEC/CMP deaminase, zinc-binding NJ56_17340 IPR016193 Cytidine deaminase-like NJ56_17340 IPR020797 Cytidine deaminase, bacteria NJ56_17345 IPR000847 Transcription regulator HTH, LysR NJ56_17345 IPR005119 LysR, substrate-binding NJ56_17345 IPR036388 NJ56_17345 NJ56_17345 IPR036390 NJ56_17345 NJ56_17350 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NJ56_17350 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NJ56_17355 IPR001891 Malic oxidoreductase NJ56_17355 IPR012301 Malic enzyme, N-terminal domain NJ56_17355 IPR012302 Malic enzyme, NAD-binding NJ56_17355 IPR015884 Malic enzyme, conserved site NJ56_17355 IPR023667 NAD-dependent malic enzyme, proteobacteria NJ56_17355 IPR036291 NJ56_17355 NJ56_17355 IPR037062 NJ56_17355 NJ56_17360 IPR003848 Domain of unknown function DUF218 NJ56_17360 IPR023604 Uncharacterised protein family SanA NJ56_17365 IPR001851 ABC transporter, permease NJ56_17370 IPR003439 ABC transporter-like NJ56_17370 IPR003593 AAA+ ATPase domain NJ56_17370 IPR017871 ABC transporter, conserved site NJ56_17370 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17375 IPR025997 Periplasmic binding protein domain NJ56_17375 IPR028082 Periplasmic binding protein-like I NJ56_17380 IPR000843 Transcription regulator HTH, LacI NJ56_17380 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_17380 IPR028082 Periplasmic binding protein-like I NJ56_17385 IPR007349 Domain of unknown function DUF418 NJ56_17390 IPR001474 GTP cyclohydrolase I NJ56_17390 IPR018234 GTP cyclohydrolase I, conserved site NJ56_17390 IPR020602 GTP cyclohydrolase I domain NJ56_17395 IPR010645 Domain of unknown function DUF1228 NJ56_17395 IPR036259 NJ56_17395 NJ56_17400 IPR000847 Transcription regulator HTH, LysR NJ56_17400 IPR005119 LysR, substrate-binding NJ56_17400 IPR036388 NJ56_17400 NJ56_17400 IPR036390 NJ56_17400 NJ56_17405 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NJ56_17405 IPR011032 GroES (chaperonin 10)-like NJ56_17405 IPR013149 Alcohol dehydrogenase, C-terminal NJ56_17405 IPR013154 Alcohol dehydrogenase GroES-like NJ56_17405 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase NJ56_17405 IPR020843 Polyketide synthase, enoylreductase NJ56_17405 IPR036291 NJ56_17405 NJ56_17410 IPR000801 Putative esterase NJ56_17410 IPR014186 S-formylglutathione hydrolase NJ56_17410 IPR029058 Alpha/Beta hydrolase fold NJ56_17415 IPR010323 Protein of unknown function DUF924 NJ56_17415 IPR011990 Tetratricopeptide-like helical domain NJ56_17420 IPR001453 Molybdopterin binding domain NJ56_17420 IPR005110 MoeA, N-terminal and linker domain NJ56_17420 IPR005111 MoeA, C-terminal, domain IV NJ56_17420 IPR008284 Molybdenum cofactor biosynthesis, conserved site NJ56_17420 IPR036135 NJ56_17420 NJ56_17420 IPR036425 NJ56_17420 NJ56_17420 IPR036688 NJ56_17420 NJ56_17425 IPR000594 UBA/THIF-type NAD/FAD binding fold NJ56_17425 IPR012730 Molybdopterin synthase sulfurylase MoeB NJ56_17425 IPR035985 NJ56_17425 NJ56_17430 IPR003439 ABC transporter-like NJ56_17430 IPR003593 AAA+ ATPase domain NJ56_17430 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17430 IPR032781 NJ56_17430 NJ56_17435 IPR002524 Cation efflux protein NJ56_17435 IPR027469 Cation efflux protein transmembrane domain NJ56_17435 IPR027470 Cation efflux protein cytoplasmic domain NJ56_17435 IPR036837 NJ56_17435 NJ56_17445 IPR000644 CBS domain NJ56_17445 IPR006667 SLC41 divalent cation transporters, integral membrane domain NJ56_17445 IPR036739 NJ56_17445 NJ56_17445 IPR038048 NJ56_17445 NJ56_17450 IPR000758 Virulence-related outer membrane protein NJ56_17450 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel NJ56_17455 IPR000620 Drug/metabolite transporter NJ56_17460 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal NJ56_17460 IPR023506 Trans-aconitate 2-methyltransferase NJ56_17460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_17465 IPR002177 DNA-binding protein Dps NJ56_17465 IPR008331 Ferritin/DPS protein domain NJ56_17465 IPR009078 Ferritin-like superfamily NJ56_17465 IPR012347 Ferritin-related NJ56_17465 IPR023067 DNA protection during starvation protein, gammaproteobacteria NJ56_17465 IPR023188 DNA-binding protein Dps, conserved site NJ56_17470 IPR001320 Ionotropic glutamate receptor NJ56_17470 IPR001638 Extracellular solute-binding protein, family 3 NJ56_17470 IPR018313 Extracellular solute-binding protein, family 3, conserved site NJ56_17475 IPR000515 MetI-like domain NJ56_17475 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family NJ56_17475 IPR035906 NJ56_17475 NJ56_17480 IPR003439 ABC transporter-like NJ56_17480 IPR003593 AAA+ ATPase domain NJ56_17480 IPR017871 ABC transporter, conserved site NJ56_17480 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17480 IPR030679 NJ56_17480 NJ56_17485 IPR010286 Ribosomal RNA large subunit methyltransferase F-like NJ56_17485 IPR016909 Ribosomal RNA large subunit methyltransferase F NJ56_17485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_17490 IPR000312 Glycosyl transferase, family 3 NJ56_17490 IPR017459 Glycosyl transferase family 3, N-terminal domain NJ56_17490 IPR035902 NJ56_17490 NJ56_17490 IPR036320 NJ56_17490 NJ56_17495 IPR006555 ATP-dependent helicase, C-terminal NJ56_17495 IPR010614 DEAD2 NJ56_17495 IPR014001 Helicase, superfamily 1/2, ATP-binding domain NJ56_17495 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17495 IPR039000 NJ56_17495 NJ56_17500 IPR001702 Porin, Gram-negative type NJ56_17500 IPR001897 Porin, gammaproteobacterial NJ56_17500 IPR023614 Porin domain NJ56_17505 IPR000620 Drug/metabolite transporter NJ56_17515 IPR000310 Orn/Lys/Arg decarboxylase, major domain NJ56_17515 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal NJ56_17515 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal NJ56_17515 IPR011193 Ornithine/lysine/arginine decarboxylase NJ56_17515 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 NJ56_17515 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 NJ56_17515 IPR015424 Pyridoxal phosphate-dependent transferase NJ56_17515 IPR036633 NJ56_17515 NJ56_17520 IPR002293 Amino acid/polyamine transporter I NJ56_17525 IPR000515 MetI-like domain NJ56_17525 IPR035906 NJ56_17525 NJ56_17530 IPR003439 ABC transporter-like NJ56_17530 IPR003593 AAA+ ATPase domain NJ56_17530 IPR017871 ABC transporter, conserved site NJ56_17530 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17535 IPR000515 MetI-like domain NJ56_17535 IPR035906 NJ56_17535 NJ56_17540 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain NJ56_17545 IPR001307 Thiosulphate sulfurtransferase, conserved site NJ56_17545 IPR001763 Rhodanese-like domain NJ56_17545 IPR036873 NJ56_17545 NJ56_17550 IPR009921 Domain of unknown function DUF1456 NJ56_17555 IPR000515 MetI-like domain NJ56_17555 IPR005769 ABC transporter, permease PhnE/PtxC NJ56_17555 IPR035906 NJ56_17555 NJ56_17560 IPR000515 MetI-like domain NJ56_17560 IPR005769 ABC transporter, permease PhnE/PtxC NJ56_17560 IPR035906 NJ56_17560 NJ56_17565 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein NJ56_17565 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein NJ56_17570 IPR003439 ABC transporter-like NJ56_17570 IPR003593 AAA+ ATPase domain NJ56_17570 IPR012693 ABC transporter, phosphonate import, PhnC NJ56_17570 IPR017871 ABC transporter, conserved site NJ56_17570 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17575 IPR007341 Transglycosylase-associated protein NJ56_17580 IPR020941 Suppressor of fused-like domain NJ56_17585 IPR002711 HNH endonuclease NJ56_17585 IPR003615 HNH nuclease NJ56_17590 IPR023577 CYTH-like domain NJ56_17590 IPR033469 NJ56_17590 NJ56_17605 IPR026866 Uncharacterised chromosomal cassette SCCmec type IVc protein CR006 NJ56_17605 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17620 IPR001207 Transposase, mutator type NJ56_17640 IPR025202 Phospholipase D-like domain NJ56_17645 IPR032874 NJ56_17645 NJ56_17650 IPR011664 Abortive infection system protein AbiD/AbiF-like NJ56_17655 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_17655 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_17675 IPR012931 TraG-like, N-terminal NJ56_17680 IPR010927 Type IV conjugative transfer system protein TraH NJ56_17685 IPR036249 NJ56_17685 NJ56_17685 IPR039555 NJ56_17685 NJ56_17690 IPR013229 PEGA NJ56_17695 IPR019533 Peptidase S26 NJ56_17695 IPR036286 NJ56_17695 NJ56_17700 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC NJ56_17705 IPR009649 TraU NJ56_17715 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN NJ56_17725 IPR002789 Domain of unknown function DUF87 NJ56_17725 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase NJ56_17725 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17730 IPR014118 Type IV conjugative transfer system protein TraV NJ56_17735 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI NJ56_17740 IPR010563 Pilus assembly TraK NJ56_17745 IPR007973 Pilus assembly TraE NJ56_17760 IPR009094 Disulphide bond isomerase, DsbC, N-terminal NJ56_17760 IPR012336 Thioredoxin-like fold NJ56_17760 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal NJ56_17760 IPR036249 NJ56_17760 NJ56_17795 IPR025669 AAA domain NJ56_17795 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17800 IPR013741 Transcriptional repressor protein KorB NJ56_17865 IPR001525 C-5 cytosine methyltransferase NJ56_17865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like NJ56_17880 IPR021944 Protein of unknown function DUF3560 NJ56_17885 IPR009241 Addiction module killer protein NJ56_17890 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_17890 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_17925 IPR019476 Type IV secretion system, TraD, DNA-binding domain NJ56_17925 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17930 IPR014059 Conjugative relaxase, N-terminal NJ56_17930 IPR014862 TrwC relaxase NJ56_17930 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_17935 IPR007560 Restriction endonuclease type IV, Mrr NJ56_17935 IPR011335 Restriction endonuclease type II-like NJ56_17950 IPR008258 Lytic transglycosylase-like SLT domain NJ56_17950 IPR023346 Lysozyme-like domain NJ56_17960 IPR001801 Histone-like protein H-NS NJ56_17970 IPR002104 Integrase, catalytic NJ56_17970 IPR011010 DNA breaking-rejoining enzyme, catalytic core NJ56_17970 IPR013762 Integrase-like, catalytic core NJ56_17970 IPR016423 Resolvase, Rsv NJ56_18020 IPR006118 Recombinase, conserved site NJ56_18020 IPR006119 Resolvase, N-terminal NJ56_18020 IPR036162 NJ56_18020 NJ56_18035 IPR012340 Nucleic acid-binding, OB-fold NJ56_18040 IPR025669 AAA domain NJ56_18040 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_18045 IPR003115 ParB/Sulfiredoxin NJ56_18045 IPR004437 ParB/RepB/Spo0J partition protein family NJ56_18045 IPR013741 Transcriptional repressor protein KorB NJ56_18045 IPR036086 NJ56_18045 NJ56_18060 IPR001126 DNA-repair protein, UmuC-like NJ56_18060 IPR017961 DNA polymerase, Y-family, little finger domain NJ56_18060 IPR025188 Domain of unknown function DUF4113 NJ56_18060 IPR036775 NJ56_18060 NJ56_18065 IPR006197 Peptidase S24, LexA-like NJ56_18065 IPR015927 Peptidase S24/S26A/S26B/S26C NJ56_18065 IPR036286 NJ56_18065 NJ56_18070 IPR003115 ParB/Sulfiredoxin NJ56_18070 IPR036086 NJ56_18070 NJ56_18075 IPR009385 Plasmid SOS inhibition NJ56_18075 IPR038131 NJ56_18075 NJ56_18080 IPR009713 Uncharacterised protein family PsiA NJ56_18105 IPR031339 NJ56_18105 NJ56_18110 IPR009241 Addiction module killer protein NJ56_18110 IPR035093 NJ56_18110 NJ56_18115 IPR001387 Cro/C1-type helix-turn-helix domain NJ56_18115 IPR010982 Lambda repressor-like, DNA-binding domain NJ56_18125 IPR008258 Lytic transglycosylase-like SLT domain NJ56_18125 IPR023346 Lysozyme-like domain NJ56_18130 IPR007925 Relaxosome protein TraM NJ56_18130 IPR010992 Integration host factor (IHF)-like DNA-binding domain NJ56_18135 IPR000792 Transcription regulator LuxR, C-terminal NJ56_18135 IPR013656 PAS fold-4 NJ56_18135 IPR016032 Signal transduction response regulator, C-terminal effector NJ56_18135 IPR036388 NJ56_18135 NJ56_18140 IPR008876 TraY NJ56_18145 IPR008873 TraA NJ56_18150 IPR009838 Type IV conjugative transfer system, protein TraL NJ56_18150 IPR016382 Pilus assembly, TraL NJ56_18155 IPR007973 Pilus assembly TraE NJ56_18160 IPR010563 Pilus assembly TraK NJ56_18160 IPR014126 Type-F conjugative transfer system secretin TraK NJ56_18165 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI NJ56_18170 IPR014118 Type IV conjugative transfer system protein TraV NJ56_18175 IPR014117 Type-IV secretion system protein TraC NJ56_18175 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase NJ56_18175 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_18180 IPR014115 Type-F conjugative transfer system protein TrbI NJ56_18185 IPR014114 Type-F conjugative transfer system protein TraW NJ56_18185 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain NJ56_18190 IPR009649 TraU NJ56_18195 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup NJ56_18195 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC NJ56_18200 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN NJ56_18205 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF NJ56_18205 IPR039555 NJ56_18205 NJ56_18210 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB NJ56_18210 IPR036249 NJ56_18210 NJ56_18210 IPR039555 NJ56_18210 NJ56_18215 IPR010927 Type IV conjugative transfer system protein TraH NJ56_18220 IPR012931 TraG-like, N-terminal NJ56_18230 IPR014128 Type IV conjugative transfer system, coupling protein TraD NJ56_18230 IPR019476 Type IV secretion system, TraD, DNA-binding domain NJ56_18230 IPR022585 TraD coupling protein, N-terminal NJ56_18230 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_18235 IPR009767 DNA helicase, TraI type NJ56_18235 IPR014059 Conjugative relaxase, N-terminal NJ56_18235 IPR014129 Conjugative transfer relaxase protein TraI NJ56_18235 IPR014862 TrwC relaxase NJ56_18235 IPR027417 P-loop containing nucleoside triphosphate hydrolase NJ56_18255 IPR003314 Transposase MuA/Repressor CI, DNA-binding NJ56_18255 IPR009061 DNA binding domain, putative NJ56_18255 IPR036388 NJ56_18255 NJ56_18260 IPR025202 Phospholipase D-like domain NJ56_18265 IPR007842 HEPN NJ56_18270 IPR014966 FRG domain NJ56_18275 IPR000525 Initiator Rep protein NJ56_18275 IPR036388 NJ56_18275 NJ56_18275 IPR036390 NJ56_18275