locus strain_id interpro function go others BD65_1 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012779|IPR014782|IPR024601|IPR027268|IPR035414|IPR037144|IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily|Peptidase M1, alanyl aminopeptidase|Peptidase M1, alanyl aminopeptidase, C-terminal|Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily|Peptidase M1, alanyl aminopeptidase, Ig-like fold|Peptidase M1, membrane alanine aminopeptidase, N-terminal|Peptidase M4/M1, CTD superfamily GO:0008237|GO:0008270 G3DSA:1.10.1740.60|G3DSA:1.10.390.10|G3DSA:1.25.50.10|G3DSA:2.60.40.1730|G3DSA:2.60.40.1840|PF01433|PF11940|PF17432|PR00756|SSF63737|TIGR02414 BD65_10 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007040|IPR023200 Ribosome modulation factor|Ribosome modulation factor domain superfamily G3DSA:1.10.10.620|MF_00919|PD051650|PF04957 BD65_100 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001898|IPR030676 Citrate carrier CitT-related|Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 PF00939|PIRSF002457|TIGR00785 BD65_1000 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR005672|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0016020|GO:0035435|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00974 BD65_1001 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098|SSF69322 BD65_1002 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003414|IPR024953|IPR025198|IPR025200|IPR036830|IPR036832 Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase N-terminal domain superfamily|Polyphosphate kinase middle domain|Polyphosphate kinase middle domain superfamily GO:0006799|GO:0008976|GO:0009358 G3DSA:1.20.58.310|G3DSA:3.30.1840.10|G3DSA:3.30.870.10|MF_00347|PF02503|PF13089|PF13090|PIRSF015589|SSF140356|SSF143724|SSF56024|TIGR03705 BD65_1003 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003695|IPR022371|IPR030673 Exopolyphosphatase|Ppx/GppA phosphatase|Pyrophosphatase, GppA/Ppx-type GO:0004309|GO:0006793 G3DSA:1.10.3210.10|G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|PIRSF001267|SSF109604|SSF53067|TIGR03706 BD65_1004 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022576 Protein of unknown function DUF2633 PD053432|PF11119 BD65_1005 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000644|IPR006667|IPR006668|IPR006669|IPR036739|IPR038048|IPR038076 CBS domain|Magnesium transporter MgtE|Magnesium transporter MgtE, transmembrane domain|Magnesium transporter, MgtE intracellular domain|MgtE, N-terminal domain superfamily|SLC41 divalent cation transporters, integral membrane domain|SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 BD65_1006 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013126|IPR018181 Heat shock protein 70 family|Heat shock protein 70, conserved site G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF00012|PS00329|SSF53067 BD65_1007 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000259|IPR008966|IPR036937 Adhesion domain superfamily|Fimbrial-type adhesion domain|Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF00419|SSF49401 BD65_1008 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001829|IPR008962|IPR013783|IPR016147|IPR016148|IPR036316 Immunoglobulin-like fold|PapD-like superfamily|Pili assembly chaperone, C-terminal|Pili assembly chaperone, C-terminal domain superfamily|Pili assembly chaperone, N-terminal|Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077|GO:0071555 G3DSA:2.60.40.10|PF00345|PF02753|PR00969|SSF49354|SSF49584 BD65_1009 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000015|IPR018030|IPR025885|IPR025949|IPR037224 Fimbrial membrane usher, conserved site|Outer membrane usher protein|PapC, N-terminal domain|PapC, N-terminal domain superfamily|PapC-like, C-terminal domain GO:0005515|GO:0009297|GO:0015473|GO:0016020 G3DSA:2.60.40.2070|G3DSA:2.60.40.2610|G3DSA:2.60.40.3110|G3DSA:3.10.20.410|PF00577|PF13953|PF13954|PS01151|SSF141729 BD65_101 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006026|IPR011049|IPR013858|IPR016294|IPR018511|IPR024079 Hemolysin-type calcium-binding conserved site|Metallopeptidase, catalytic domain superfamily|Peptidase M10 serralysin, C-terminal|Peptidase M10B|Peptidase, metallopeptidase|Serralysin-like metalloprotease, C-terminal GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008237|GO:0008270 G3DSA:2.150.10.10|G3DSA:3.40.390.10|PF08548|PF13583|PIRSF001205|PR00313|PS00330|SM00235|SSF51120|SSF55486 BD65_1010 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000259|IPR008966|IPR036937 Adhesion domain superfamily|Fimbrial-type adhesion domain|Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF00419|SSF49401 BD65_1011 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006143|IPR022824|IPR039562 Membrane fusion protein, biotin-lipoyl like domain|Multidrug resistance protein MdtA|RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 G3DSA:1.10.287.470|G3DSA:2.40.30.170|G3DSA:2.40.420.20|G3DSA:2.40.50.100|MF_01422|PF13437|PF13533|SSF111369|TIGR01730 BD65_1012 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001036|IPR022831|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains|Multidrug resistance protein MdtB GO:0016020|GO:0022857|GO:0055085 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|MF_01423|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BD65_1013 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001036|IPR023931|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains|Multidrug resistance protein MdtC GO:0016020|GO:0022857|GO:0055085 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|MF_01424|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BD65_1014 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR023721|IPR036259 MFS transporter superfamily|Major facilitator superfamily|Multidrug resistance protein MdtD, putative GO:0016021|GO:0055085 G3DSA:1.20.1250.20|G3DSA:1.20.1720.10|MF_01577|PF07690|PR01036|SSF103473 BD65_1015 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR036097|IPR036890 HAMP domain|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 BD65_1016 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001867|IPR011006|IPR036388 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BD65_1017 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010879|IPR036913 Domain of unknown function DUF1508|YegP-like superfamily G3DSA:2.30.29.80|PF07411|SSF160113 BD65_1018 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001539|IPR032525 Peptidase U32|Peptidase family U32, C-terminal GO:0006508|GO:0008233 G3DSA:2.40.30.10|PF01136|PF16325|PS01276 BD65_1019 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001206|IPR005218|IPR016064|IPR017438|IPR022433 Diacylglycerol kinase, catalytic domain|Diacylglycerol/lipid kinase|Inorganic polyphosphate/ATP-NAD kinase, N-terminal|Lipid kinase YegS|NAD kinase/diacylglycerol kinase-like domain superfamily GO:0001727|GO:0003951|GO:0016301|GO:0046872 G3DSA:2.60.200.40|G3DSA:3.40.50.10330|MF_01377|PF00781|SM00046|SSF111331|TIGR00147|TIGR03702 BD65_102 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003086|IPR016085|IPR021140|IPR022815 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19|Metalloprotease inhibitor I38|Protease inhibitor I38|Protease inhibitor, beta-barrel domain GO:0004866|GO:0030288 G3DSA:2.40.128.10|PD015804|PF02974|PR01274|SSF50882 BD65_1020 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014453|IPR036501 Inhibitor of vertebrate lysozyme|Inhibitor of vertebrate lysozyme superfamily GO:0042597|GO:0043086 G3DSA:3.40.1420.10|PF08816|PIRSF009103|SSF89872 BD65_1022 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004399|IPR013749|IPR029056 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like GO:0008972|GO:0009228 G3DSA:3.40.1190.20|PF08543|SSF53613|TIGR00097 BD65_1023 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011024 Gamma-crystallin-like G3DSA:2.60.20.10|SSF49695 BD65_1024 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, glutamine amidotransferase|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|PR00097|PR00099|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 BD65_1025 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 BD65_1026 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 MF_00378|PF02601|PF13742|TIGR00237 BD65_1027 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010807|IPR029037 Protein of unknown function DUF1407|YfgJ-like G3DSA:2.10.290.10|PD060428|PF07191|SSF161187 BD65_1028 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|SSF52540|TIGR00231|TIGR03594 BD65_1029 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002372|IPR011047|IPR015943|IPR017687|IPR018391 Outer membrane protein assembly factor BamB|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like superfamily|WD40/YVTN repeat-like-containing domain superfamily GO:0005515 G3DSA:2.130.10.10|MF_00923|PF13360|SM00564|SSF50998|TIGR03300 BD65_103 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR010128|IPR011527|IPR017871|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, PrtD|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR01842 BD65_1030 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990|IPR018704|IPR026039 Tetratricopeptide repeat-like domain|Tetratricopeptide-like helical domain superfamily|Uncharacterised protein family UPF0070 GO:0005515 G3DSA:1.25.40.10|PF09976|PIRSF006170|SSF48452 BD65_1031 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004154|IPR004516|IPR015807|IPR036621 Anticodon-binding|Anticodon-binding domain superfamily|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|SSF52954|SSF55681|TIGR00442 BD65_1032 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004588|IPR011005|IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type|Dihydropteroate synthase-like GO:0005506|GO:0008299|GO:0016114|GO:0044237|GO:0046429|GO:0055114 G3DSA:3.20.20.20|G3DSA:3.30.413.10|MF_00159|PF04551|PIRSF004640|SSF51717|SSF56014|TIGR00612 BD65_1033 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001387|IPR010982|IPR025194 Cro/C1-type helix-turn-helix domain|Domain of unknown function DUF4115|Lambda repressor-like, DNA-binding domain superfamily GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13413|PF13464|SM00530|SSF47413 BD65_1034 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990|IPR013360|IPR019734 Pilus biogenesis/stability type IV, PilW|Tetratricopeptide repeat|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|PF13181|PF13431|SM00028|SSF48452|TIGR02521 BD65_1035 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004383|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:1.10.150.530|G3DSA:3.20.20.70|MF_01849|PF04055|PIRSF006004|SSF102114|TIGR00048 BD65_1036 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001564|IPR023005|IPR034907|IPR036850 Nucleoside diphosphate kinase|Nucleoside diphosphate kinase, active site|Nucleoside diphosphate kinase-like domain|Nucleoside diphosphate kinase-like domain superfamily GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 G3DSA:3.30.70.141|MF_00451|PF00334|PR01243|PS00469|SM00562|SSF54919 BD65_1037 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011024 Gamma-crystallin-like G3DSA:2.60.20.10|PF03995|SSF49695 BD65_1038 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001264|IPR001460|IPR009647|IPR011815|IPR012338|IPR023346|IPR036950 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain superfamily|Penicillin binding protein transglycosylase domain|Penicillin-binding protein 1C|Penicillin-binding protein, transpeptidase|Penicillin-binding, C-terminal GO:0008658|GO:0008955|GO:0009252 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PF06832|SSF53955|SSF56601|TIGR02073 BD65_1039 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001599|IPR002890|IPR008930|IPR011625|IPR019565|IPR026284 Alpha-2-macroglobulin|Alpha-2-macroglobulin domain protein, bacteria|Alpha-2-macroglobulin, N-terminal|Alpha-2-macroglobulin, N-terminal 2|Alpha-2-macroglobulin, thiol-ester bond-forming|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0004866 G3DSA:1.50.10.20|G3DSA:2.60.40.1930|PF00207|PF01835|PF07703|PF10569|PF11974|PIRSF038980|SM01359|SM01360|SSF48239 BD65_104 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003997|IPR006143|IPR006144|IPR010129|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain|RTX secretion protein D, Gram-negative bacteria|Secretion protein HlyD, conserved site|Type I secretion membrane fusion protein, HlyD family GO:0005215|GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0055085 G3DSA:1.10.287.470|G3DSA:2.40.30.170|G3DSA:2.40.50.100|PF00529|PF16576|PR01490|PS00543|TIGR01843 BD65_1040 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009839|IPR027945 SseB protein N-terminal domain|SseB protein, C-terminal PF07179|PF14581 BD65_1041 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000819|IPR008330|IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, peptidase B GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.630.10|MF_00504|PF00883|PF12404|PIRSF036388|PR00481|PS00631|SSF53187 BD65_1042 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007479|IPR036762 ISC system FeS cluster assembly, IscX|IscX-like superfamily GO:0016226 G3DSA:1.10.10.600|PF04384|PIRSF039003|SSF140319|TIGR03412 BD65_1043 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001041|IPR001055|IPR011536|IPR012675|IPR018298|IPR036010 2Fe-2S ferredoxin-like superfamily|2Fe-2S ferredoxin-type iron-sulfur binding domain|Adrenodoxin|Adrenodoxin, iron-sulphur binding site|Beta-grasp domain superfamily|Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PR00355|PS00814|SSF54292|TIGR02007 BD65_1044 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010236|IPR013126|IPR018181|IPR029047|IPR029048 Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain superfamily|Heat shock protein 70kD, peptide-binding domain superfamily|ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00679|PF00012|PR00301|PS00297|PS00329|PS01036|SSF100920|SSF100934|SSF53067|TIGR01991 BD65_1045 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001623|IPR004640|IPR009073|IPR036386|IPR036869 Chaperone J-domain superfamily|Co-chaperone Hsc20|Co-chaperone HscB, C-terminal oligomerisation domain|DnaJ domain|HscB, C-terminal domain superfamily GO:0001671|GO:0051087|GO:0051259|GO:0097428 G3DSA:1.10.287.110|G3DSA:1.20.1280.20|MF_00682|PF00226|PF07743|SM00271|SSF46565|SSF47144|TIGR00714 BD65_1046 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000361|IPR011302|IPR016092|IPR017870|IPR035903 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site|HesB-like domain superfamily|Iron-binding protein IscA, proteobacteria GO:0005198|GO:0005506|GO:0051536|GO:0097428 G3DSA:2.60.300.12|MF_01429|PF01521|PS01152|SSF89360|TIGR00049|TIGR02011 BD65_1047 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002871|IPR011339 ISC system FeS cluster assembly, IscU scaffold|NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PF01592|SSF82649|TIGR01999 BD65_1048 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000192|IPR010240|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase IscS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0030170|GO:0031071|GO:0044571 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00331|PF00266|PIRSF005572|PS00595|SSF53383|TIGR02006 BD65_1049 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000944|IPR010242|IPR030489|IPR036388|IPR036390 Transcription factor HTH, IscR|Transcription regulator Rrf2-type|Transcription regulator Rrf2-type, conserved site|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003690|GO:0003700|GO:0006355 G3DSA:1.10.10.10|MF_01176|PF02082|PS01332|SSF46785|TIGR00738|TIGR02010 BD65_105 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01844 BD65_1050 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001537|IPR004384|IPR029026|IPR029028 Alpha/beta knot methyltransferases|RNA methyltransferase TrmJ/LasT|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:1.10.8.590|G3DSA:3.40.1280.10|PF00588|PIRSF004808|SSF75217|TIGR00050 BD65_1051 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000760|IPR020550|IPR020583|IPR022337 Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site|Inositol monophosphatase-like GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|SSF56655 BD65_1052 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 PF03824 BD65_1053 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010412|IPR016537 Protein of unknown function DUF1007|Uncharacterised conserved protein UCP008159, PF06226|PIRSF008159 BD65_1054 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR024989|IPR026032|IPR036259 MFS transporter superfamily|Major facilitator superfamily associated domain|Probable 3-phenylpropionic acid transporter G3DSA:1.20.1250.20|PF12832|PIRSF004925|SSF103473 BD65_1055 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011608|IPR036634 PRD domain|PRD domain superfamily GO:0006355 G3DSA:1.10.1790.10|PF00874|SSF63520 BD65_1056 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798|IPR039429 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site|Serine hydroxymethyltransferase-like domain GO:0003824|GO:0004372|GO:0019264|GO:0030170|GO:0035999 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|SSF53383 BD65_1057 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000971|IPR001221|IPR001433|IPR008333|IPR009050|IPR012292|IPR017938|IPR023950|IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain|Flavohemoprotein|Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain|Globin|Globin-like superfamily|Globin/Protoglobin|Oxidoreductase FAD/NAD(P)-binding|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0008941|GO:0016491|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 G3DSA:1.10.490.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|MF_01252|PF00042|PF00175|PF00970|PR00410|SSF46458|SSF52343|SSF63380 BD65_1058 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032791|IPR036388|IPR036390 Uncharacterised protein YhfZ, C-terminal domain|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF14502|PF14503|SSF46785|SSF53850 BD65_1059 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR036634 PRD domain superfamily GO:0006355 SSF63520 BD65_1060 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001608|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel G3DSA:2.40.37.30|G3DSA:3.20.20.10|PF01168|SSF51419 BD65_1061 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001559|IPR032466 Metal-dependent hydrolase|Phosphotriesterase GO:0008270|GO:0009056 G3DSA:3.20.20.140|PF02126|PIRSF016839|SSF51556 BD65_1062 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021238 Protein of unknown function DUF2620 PF10941 BD65_1063 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019733 Uncharacterised protein family YhfT PF10797 BD65_1064 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|SM00938|SSF54913 BD65_1065 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000132|IPR003010|IPR003694|IPR014445|IPR014729|IPR022310|IPR036526 Carbon-nitrogen hydrolase|Carbon-nitrogen hydrolase superfamily|Glutamine-dependent NAD(+) synthetase|NAD(+) synthetase|NAD/GMP synthase|Nitrilase/cyanide hydratase, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|MF_02090|PF00795|PF02540|PIRSF006630|PS00920|SSF52402|SSF56317|TIGR00552 BD65_1066 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR002078|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|Homeobox-like domain superfamily|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PS00675|PS00676|PS00688|SM00382|SM00448|SSF46689|SSF52172|SSF52540 BD65_1067 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025262 Quorum-sensing regulator protein G PD117379|PF13942 BD65_1068 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003661|IPR004358|IPR036097|IPR036890 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 BD65_1069 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:2.60.40.2550 BD65_107 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000516|IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane|Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|PR00161|SSF81342 BD65_1070 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010073|IPR010918|IPR029062|IPR036604|IPR036676|IPR036921 Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase|Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily|PurM-like, C-terminal domain|PurM-like, C-terminal domain superfamily|PurM-like, N-terminal domain superfamily GO:0004642|GO:0006189 G3DSA:1.10.8.750|G3DSA:3.30.1330.10|G3DSA:3.40.50.880|G3DSA:3.90.650.10|MF_00419|PF02769|PF13507|SM01211|SSF109736|SSF52317|SSF55326|SSF56042|SSF82697|TIGR01735 BD65_1071 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000189|IPR001638|IPR008258|IPR023346|IPR023703 Lysozyme-like domain superfamily|Membrane-bound lytic murein transglycosylase F|Prokaryotic transglycosylase, active site|Solute-binding protein family 3/N-terminal domain of MltF|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020|GO:0016837 G3DSA:1.10.530.10|G3DSA:3.40.190.10|MF_02016|PF00497|PF01464|PS00922|SM00062|SSF53850|SSF53955 BD65_1072 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|SSF53927 BD65_1075 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001347|IPR005486|IPR005488 Glucokinase regulatory protein, conserved site|N-acetylmuramic acid 6-phosphate etherase MurQ|Sugar isomerase (SIS) GO:0016835|GO:0046348|GO:0097367|GO:1901135 G3DSA:1.10.8.1080|G3DSA:3.40.50.10490|MF_00068|PF01380|PS01272|SSF53697|TIGR00274 BD65_1076 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000281|IPR001347|IPR009057|IPR036388 Helix-turn-helix protein RpiR|Homeobox-like domain superfamily|Sugar isomerase (SIS)|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0006355|GO:0097367|GO:1901135 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|SSF46689|SSF53697 BD65_1077 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|SSF54862 BD65_1078 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002582|IPR004568|IPR008278|IPR037143 4'-phosphopantetheinyl transferase domain|4'-phosphopantetheinyl transferase domain superfamily|Holo-[acyl carrier protein] synthase|Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 G3DSA:3.90.470.20|MF_00101|PD004282|PF01648|SSF56214|TIGR00516|TIGR00556 BD65_1079 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004569|IPR013785|IPR036130 Aldolase-type TIM barrel|Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ|Pyridoxine 5'-phosphate synthase GO:0003824|GO:0005737|GO:0008615|GO:0033856 G3DSA:3.20.20.70|MF_00279|PF03740|SSF63892|TIGR00559 BD65_108 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000572|IPR036374 Oxidoreductase, molybdopterin-binding domain|Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 G3DSA:3.90.420.10|PF00174|SSF56524 BD65_1080 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003717|IPR012340|IPR022572|IPR037278 ARFGAP/RecO-like zinc finger|DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 G3DSA:1.20.1440.120|G3DSA:2.40.50.140|MF_00201|PF02565|PF11967|SSF50249|SSF57863|TIGR00613 BD65_1081 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain superfamily, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|SSF52540|SSF54814|TIGR00231|TIGR00436 BD65_1082 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000999|IPR011907|IPR014720|IPR036389 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain|Ribonuclease III, endonuclease domain superfamily GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 BD65_1083 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000223|IPR015927|IPR019533|IPR019757|IPR019758|IPR036286 LexA/Signal peptidase-like superfamily|Peptidase S24/S26A/S26B/S26C|Peptidase S26|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 PF00717|PF10502|PR00727|PS00760|PS00761|SSF51306|TIGR02227 BD65_1084 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR013842|IPR027417|IPR031157|IPR035647|IPR038363 EF-G domain III/V-like|Elongation factor 4|Elongation factor EFG, domain V-like|GTP-binding protein LepA, C-terminal|LepA, C-terminal domain superfamily|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2 GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.2570|G3DSA:3.30.70.3380|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PS00301|SSF52540|SSF54980|TIGR00231|TIGR01393 BD65_1085 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR026268 Protein RseC PF04246|PIRSF004923 BD65_1086 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005588|IPR033434|IPR033436|IPR038484 MucB/RseB|MucB/RseB, C-terminal|MucB/RseB, C-terminal domain superfamily|MucB/RseB, N-terminal G3DSA:2.50.20.10|G3DSA:3.30.200.100|PF03888|PF17188|PIRSF005427 BD65_1087 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005572|IPR005573|IPR026279|IPR036147 Anti sigma-E protein RseA, C-terminal|Anti sigma-E protein RseA, N-terminal|Anti sigma-E protein RseA, N-terminal domain superfamily|Sigma-E factor negative regulatory protein RseA GO:0016989 G3DSA:1.10.10.880|PF03872|PF03873|PIRSF016938|SSF89069 BD65_1088 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000838|IPR007627|IPR013249|IPR013324|IPR013325|IPR014284|IPR014286|IPR036388 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4-like|RNA polymerase sigma-70 RpoE type|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|SSF88659|SSF88946|TIGR02937|TIGR02939 BD65_1089 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003953|IPR005288|IPR015939|IPR027477|IPR036188|IPR037099 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain superfamily|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PF02910|PIRSF000171|PR00368|SSF46977|SSF51905|SSF56425|TIGR00551 BD65_1090 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002052|IPR007848|IPR022882|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase|tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0003676|GO:0008168|GO:0016430|GO:0032259 G3DSA:3.40.50.150|MF_01872|PF05175|PR00507|PS00092|SSF53335 BD65_1091 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417|IPR028621 ATP-dependent RNA helicase DEAD-box, conserved site|ATP-dependent RNA helicase SrmB|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000027|GO:0003676|GO:0004004|GO:0005524 G3DSA:3.40.50.300|MF_00967|PF00270|PF00271|PS00039|SM00487|SM00490|SSF52540 BD65_1092 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002110|IPR020683|IPR036770 Ankyrin repeat|Ankyrin repeat-containing domain|Ankyrin repeat-containing domain superfamily GO:0005515 G3DSA:1.25.40.20|PF12796|SM00248|SSF48403 BD65_1093 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR024499|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF2974 G3DSA:3.40.50.1820|PF11187|SSF53474 BD65_1094 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001150|IPR011140|IPR019777 Autonomous glycyl radical cofactor GrcA|Formate C-acetyltransferase glycine radical, conserved site|Glycine radical domain GO:0003824 G3DSA:3.20.70.20|MF_00806|PF01228|PIRSF000378|PS00850|SSF51998|TIGR04365 BD65_1095 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002043|IPR005122|IPR018085|IPR036895 Uracil-DNA glycosylase family 1|Uracil-DNA glycosylase, active site|Uracil-DNA glycosylase-like|Uracil-DNA glycosylase-like domain superfamily GO:0004844|GO:0006281|GO:0006284|GO:0016799 G3DSA:3.40.470.10|MF_00148|PF03167|PS00130|SM00986|SM00987|SSF52141|TIGR00628 BD65_1096 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|SSF51064|SSF58014 BD65_1097 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, C-terminal|Inorganic polyphosphate/ATP-NAD kinase, N-terminal|NAD kinase|NAD kinase/diacylglycerol kinase-like domain superfamily GO:0003951|GO:0006741|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|SSF111331 BD65_1098 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003395|IPR004604|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF02463|PIRSF003128|SSF52540|TIGR00634 BD65_1099 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007450|IPR026592|IPR037873 BamE-like|Lipoprotein SmpA/OmlA|Outer membrane protein assembly factor BamE GO:0019867 G3DSA:3.30.1450.10|MF_00925|PF04355 BD65_11 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010083|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain superfamily GO:0005737|GO:0006633|GO:0008693 G3DSA:3.10.129.10|MF_00405|PF07977|SSF54637|TIGR01749 BD65_110 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BD65_1100 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005346|IPR016155|IPR037021 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|RnfH protein|RnfH superfamily G3DSA:3.10.20.280|MF_00460|PF03658|SSF54285 BD65_1101 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005031|IPR023393 Coenzyme Q-binding protein COQ10, START domain|START-like domain superfamily G3DSA:3.30.530.20|PF03364|SSF55961 BD65_1102 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|SSF74982|TIGR00086 BD65_1103 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002104|IPR010998|IPR011010|IPR013762|IPR025166|IPR038488 DNA breaking-rejoining enzyme, catalytic core|Integrase, DNA-binding domain|Integrase, DNA-binding domain superfamily|Integrase, catalytic domain|Integrase-like, catalytic domain superfamily|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|G3DSA:3.30.160.390|PF00589|PF13356|SSF56349 BD65_1104 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025382 Domain of unknown function DUF4297 PF14130 BD65_1105 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001650|IPR011545|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|SM00487|SM00490|SSF52540 BD65_1106 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007684 Zinc finger, Ogr/Delta-type PF04606 BD65_1109 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010260 DNA-binding transcriptional activator AlpA PF05930 BD65_111 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeobox-like domain superfamily GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PS00041|SM00342|SSF46689 BD65_1111 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018880 Bacteriophage P4, Ash protein PF10554 BD65_1113 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR035317 Protein of unknown function DUF5375 PD070475|PF17345 BD65_1114 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004968|IPR006171|IPR013237|IPR014818|IPR027417|IPR036388|IPR036390 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal|Bacteriophage/plasmid primase, P4, C-terminal|DNA primase/nucleoside triphosphatase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|TOPRIM domain|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003896|GO:0004386|GO:0008270 G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF03288|PF08273|PF08706|PF13362|SM00778|SM00885|SSF46785|SSF52540|SSF57783 BD65_1115 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010998|IPR011010|IPR025166|IPR038488 DNA breaking-rejoining enzyme, catalytic core|Integrase, DNA-binding domain|Integrase, DNA-binding domain superfamily|Integrase/recombinase, N-terminal GO:0003677 G3DSA:1.10.150.130|G3DSA:3.30.160.390|PF13356|SSF56349 BD65_1117 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR036397 Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 BD65_1118 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527|SSF46689 BD65_1119 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 G3DSA:3.40.50.10490|PF01380|SSF53697 BD65_1120 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000577|IPR006003|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 G3DSA:3.30.420.40|G3DSA:3.30.420.460|PF00370|PF02782|PIRSF000538|SSF53067|TIGR01315 BD65_1121 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PF02653 BD65_1122 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PF02653 BD65_1123 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_1124 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BD65_1125 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:1.10.10.800|G3DSA:3.40.50.1820|PF12146|SSF53474 BD65_1126 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.290|PF00126|PF03466|SSF46785|SSF53850 BD65_1127 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PF02652|TIGR00795 BD65_1128 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000262|IPR008259|IPR012133|IPR013785|IPR020920 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent alpha-hydroxy acid dehydrogenase, active site|FMN-dependent dehydrogenase|L-lactate dehydrogenase, bacterial GO:0003824|GO:0004457|GO:0006089|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01559|PF01070|PIRSF000138|PS00557|SSF51395 BD65_1129 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006231|IPR036188 FAD/NAD(P)-binding domain superfamily|Malate:quinone-oxidoreductase GO:0006099|GO:0008924 MF_00212|PF06039|SSF51905|TIGR01320 BD65_113 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|SSF52540 BD65_1133 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock domain|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BD65_1134 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006983 MbeD/MobD-like PF04899 BD65_1135 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009587 Protein of unknown function DUF1198 PD093913|PF06711 BD65_1136 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018994 Protein of unknown function DUF2002 G3DSA:3.90.1150.40|PF09400|SSF159894 BD65_1137 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023497 Acid shock protein MF_00546 BD65_1138 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002109|IPR011909|IPR036249 Glutaredoxin|Glutaredoxin-like protein NrdH|Thioredoxin-like superfamily GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|SSF52833|TIGR02194 BD65_1139 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004465|IPR020852|IPR029039 Flavoprotein-like superfamily|Ribonucleotide reductase Class Ib, NrdI|Ribonucleotide reductase, class Ib, NrdI, bacterial G3DSA:3.40.50.360|MF_00128|PF07972|PIRSF005087|SSF52218|TIGR00333 BD65_114 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004713|IPR004837 Calcium/proton exchanger|Sodium/calcium exchanger membrane region GO:0006812|GO:0008324|GO:0016021|GO:0055085 PF01699|TIGR00846 BD65_1140 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000788|IPR008926|IPR013346|IPR013509|IPR013554|IPR026459 Ribonucleotide reductase N-terminal|Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, class 1b, subunit NrdE|Ribonucleotide reductase, class I , alpha subunit GO:0004748|GO:0005524|GO:0006260|GO:0055114 G3DSA:1.10.1650.20|G3DSA:3.20.70.20|PF00317|PF02867|PF08343|PR01183|PS00089|SSF48168|SSF51998|TIGR02506|TIGR04170 BD65_1141 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000358|IPR009078|IPR012348|IPR026494|IPR030475 Ferritin-like superfamily|Ribonucleoside reductase subunit beta, NrdF|Ribonucleotide reductase small subunit family|Ribonucleotide reductase small subunit, acitve site|Ribonucleotide reductase-like GO:0005971|GO:0009263|GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF00268|PIRSF000355|PS00368|SSF47240|TIGR04171 BD65_1142 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000644|IPR003439|IPR003593|IPR005892|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|CBS domain|Glycine betaine transport ATP-binding subunit|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016887|GO:0031460 G3DSA:3.10.580.10|G3DSA:3.40.50.300|PF00005|PF00571|PS00211|SM00382|SSF52540|SSF54631|TIGR01186 BD65_1143 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_1144 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 G3DSA:3.40.190.10|G3DSA:3.40.190.100|PF04069|SSF53850 BD65_1147 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000835|IPR023187|IPR036388|IPR036390 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|SM00347|SSF46785 BD65_1148 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:1.20.1600.10|SSF56954 BD65_1149 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005694|IPR006143|IPR032317 Efflux pump membrane protein Emr|RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0005215|GO:0006855|GO:0015238|GO:0016020|GO:0055085 G3DSA:1.10.287.470|G3DSA:2.40.30.170|G3DSA:2.40.50.100|PF00529|PF16576|SSF111369|TIGR00998 BD65_115 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007037|IPR013113|IPR017938|IPR039261 FAD-binding 9, siderophore-interacting|Ferredoxin-NADP reductase (FNR), nucleotide-binding domain|Riboflavin synthase-like beta-barrel|Siderophore-interacting protein, C-terminal domain G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF04954|PF08021|SSF63380 BD65_1150 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004638|IPR011701|IPR036259 Drug resistance transporter EmrB/QacA subfamily|MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1720.10|PF07690|PR01036|SSF103473|TIGR00711 BD65_1151 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001537|IPR013123|IPR016479|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type|tRNA/rRNA methyltransferase, YfiF, predicted GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|PF00588|PF08032|PIRSF006280|SM00967|SSF55315|SSF75217 BD65_1152 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005746|IPR013766|IPR017937|IPR036249 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like superfamily GO:0006662|GO:0015035|GO:0045454 G3DSA:2.20.28.140|G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|SSF52833|TIGR01068 BD65_1153 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005636 DTW PF03942|SM01144 BD65_1154 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR003781|IPR013815|IPR016102|IPR016181|IPR032875|IPR036291 ATP-grasp fold, subdomain 1|Acyl-CoA N-acyltransferase|CoA-binding|GNAT domain|NAD(P)-binding domain superfamily|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0005524|GO:0048037 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|G3DSA:3.40.630.30|PF00583|PF13380|PF13549|PF13607|SM00881|SSF51735|SSF52210|SSF55729|SSF56059 BD65_1155 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001736|IPR025202 Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF13091|PIRSF000850|SM00155|SSF56024 BD65_1156 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017028|IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein|Uncharacterised conserved protein UCP034456 PF10043|PIRSF034456 BD65_116 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003660|IPR011712|IPR016380|IPR029095|IPR036890 HAMP domain|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|NarX-like, N-terminal|Signal transduction histidine kinase, nitrate/nitrite-sensing|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0004673|GO:0007165|GO:0016021|GO:0046983 G3DSA:1.10.287.130|G3DSA:1.20.120.960|G3DSA:3.30.565.10|PF00672|PF02518|PF07730|PF13675|PIRSF003167|SM00304|SM00387|SSF158472|SSF55874 BD65_1161 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004446|IPR006543|IPR006549|IPR023214|IPR036412 D,D-heptose 1,7-bisphosphate phosphatase|HAD superfamily|HAD-like superfamily|HAD-superfamily hydrolase,subfamily IIIA|Histidinol-phosphate phosphatase GO:0005975|GO:0016791 G3DSA:3.40.50.1000|PF13242|PIRSF004682|SSF56784|TIGR00213|TIGR01656|TIGR01662 BD65_1162 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR012692|IPR017871|IPR018449|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria|ABC transporter-like|NIL domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0009276|GO:0016887|GO:0048473|GO:0048474 G3DSA:3.30.70.260|G3DSA:3.40.50.300|PF00005|PF09383|PS00211|SM00382|SM00930|SSF52540|SSF55021|TIGR02314 BD65_1163 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_1164 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|SSF53850|TIGR00363 BD65_1165 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 G3DSA:3.30.110.70|MF_00976|PF16358 BD65_1166 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023368|IPR023370|IPR036413|IPR036414 Uncharacterised protein family UPF0066, conserved site|YaeB, N-terminal domain superfamily|YaeB-like superfamily|YaeB-like, N-terminal domain G3DSA:2.40.30.70|G3DSA:3.30.2310.10|PF01980|PS01318|SSF118196|TIGR00104 BD65_1167 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR007214|IPR023717|IPR036621|IPR036754 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Anticodon-binding domain superfamily|Proline-tRNA ligase, class IIa|Prolyl-tRNA synthetase, class IIa, bacterial-type|Prolyl-tRNA synthetase, class IIa, type 1|YbaK/aminoacyl-tRNA synthetase-associated domain|YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0000166|GO:0002161|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|G3DSA:3.90.960.10|MF_01569|PF00587|PF03129|PF04073|PIRSF001535|PR01046|SSF52954|SSF55681|SSF55826|TIGR00409 BD65_1168 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007298|IPR033450|IPR038139 Copper resistance lipoprotein NlpE|NlpE, C-terminal OB domain|NlpE, C-terminal domain superfamily G3DSA:2.40.128.300|G3DSA:2.40.50.540|PF04170|PF17185 BD65_1169 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 G3DSA:3.30.160.20|PF00472|PS00745|SSF75620 BD65_117 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018895 Protein of unknown function DUF2474 PF10617 BD65_1170 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009822|IPR011335|IPR038590 Restriction endonuclease type II-like|YaeQ|YaeQ superfamily G3DSA:3.10.640.10|PF07152|PIRSF011484|SM01322|SSF52980 BD65_1171 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009624 Uncharacterised protein family UPF0253 MF_01064|PD054643|PF06786 BD65_1172 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009778|IPR023534|IPR038626 Modulator of Rho-dependent transcription termination|Rof-like superfamily|Rof/RNase P-like G3DSA:2.30.30.400|PF07073|SSF101744 BD65_1173 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009056|IPR036909 Cytochrome c-like domain|Cytochrome c-like domain superfamily GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 BD65_1174 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011063|IPR012094|IPR012795|IPR012796|IPR014729|IPR015262 Lysidine-tRNA(Ile) synthetase, C-terminal|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase , substrate-binding domain|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:1.20.59.20|G3DSA:3.40.50.620|MF_01161|PF01171|PF09179|PF11734|SM00977|SSF52402|SSF56037|SSF82829|TIGR02432|TIGR02433 BD65_1175 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BD65_1177 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 G3DSA:3.90.210.10|PF02917|SSF56399 BD65_1179 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001095|IPR029045 Acetyl-CoA carboxylase, alpha subunit|ClpP/crotonase-like domain superfamily GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_00823|PF03255|PR01069|SSF52096|TIGR00513 BD65_118 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PIRSF000267|TIGR00203 BD65_1180 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003141|IPR004013|IPR004365|IPR004805|IPR011708|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003676|GO:0003824|GO:0006260|GO:0008408 G3DSA:1.10.10.1600|G3DSA:2.40.50.140|G3DSA:3.20.20.140|PF01336|PF02811|PF07733|PF14579|SM00481|SSF89550|TIGR00594 BD65_1181 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012337|IPR022898|IPR024567|IPR036397 Ribonuclease H superfamily|Ribonuclease H-like superfamily|Ribonuclease HII|Ribonuclease HII/HIII domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00052_B|PF01351|SSF53098 BD65_1182 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 MF_00392|PF02684|SSF53756|TIGR00215 BD65_1183 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001451|IPR010137|IPR011004|IPR018357|IPR029098|IPR037157 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like superfamily|UDP N-acetylglucosamine O-acyltransferase, C-terminal|UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily GO:0008610|GO:0008780|GO:0016740 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|MF_00387|PF00132|PF13720|PIRSF000456|PS00101|SSF51161|TIGR01852 BD65_1184 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010084|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain superfamily GO:0005737|GO:0006633|GO:0016836 G3DSA:3.10.129.10|MF_00406|PF07977|SSF54637|TIGR01750 BD65_1185 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001451|IPR007691|IPR011004|IPR018357|IPR020573 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like superfamily|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016740|GO:0016747 G3DSA:2.160.10.10|G3DSA:3.40.1390.10|MF_00523|PF00132|PF04613|PS00101|SSF51161|TIGR01853 BD65_1186 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain superfamily GO:0051082 G3DSA:3.30.910.20|PF03938|PIRSF002094|SM00935|SSF111384 BD65_1187 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000184|IPR010827|IPR023707 Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|POTRA domain, BamA/TamA-like GO:0019867|GO:0071709 G3DSA:2.40.160.50|G3DSA:3.10.20.310|MF_01430|PF01103|PF07244|PIRSF006076|TIGR03303 BD65_1188 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001478|IPR004387|IPR008915|IPR036034 PDZ domain|PDZ superfamily|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PF13180|SM00228|SSF50156|TIGR00054 BD65_1189 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315 BD65_119 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 PF01654|PIRSF006446 BD65_1190 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001441|IPR018520|IPR036424 Decaprenyl diphosphate synthase-like|Decaprenyl diphosphate synthase-like superfamily|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|SSF64005|TIGR00055 BD65_1191 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003821|IPR013512|IPR013644|IPR026877|IPR036169|IPR036291 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|DXP reductoisomerase, C-terminal domain superfamily|NAD(P)-binding domain superfamily GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|SSF51735|SSF55347|SSF69055|TIGR00243 BD65_1192 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002661|IPR023584|IPR036191 RRF superfamily|Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|G3DSA:3.30.1360.40|MF_00040|PF01765|SSF55194|TIGR00496 BD65_1193 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001048|IPR011817|IPR015963|IPR036393 Acetylglutamate kinase-like superfamily|Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|SSF53633|TIGR02075 BD65_1194 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001816|IPR009060|IPR014039|IPR018101|IPR036402 Elongation factor Ts, dimerisation domain superfamily|Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like superfamily GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01127|SSF46934|SSF54713|TIGR00116 BD65_1195 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PS00963|SSF52313|TIGR01011 BD65_1196 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000994|IPR001714|IPR002467|IPR036005 Creatinase/aminopeptidase-like|Peptidase M24|Peptidase M24, methionine aminopeptidase|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PS00680|SSF55920|TIGR00500 BD65_1197 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002912|IPR002934|IPR003607|IPR006674|IPR010043|IPR013546 ACT domain|Bifunctional uridylyltransferase/uridylyl-removing enzyme|HD domain|HD/PDEase domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase|Polymerase, nucleotidyl transferase domain GO:0006807|GO:0008773|GO:0016779 G3DSA:1.10.3210.10|G3DSA:3.30.70.260|MF_00277|PF01842|PF01909|PF01966|PF08335|PIRSF006288|SM00471|SSF109604|SSF55021|SSF81301|SSF81593|TIGR01693 BD65_1198 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001451|IPR005664|IPR011004|IPR018357|IPR023180|IPR037133 Hexapeptide repeat|Hexapeptide transferase, conserved site|Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family|Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily|Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1|Trimeric LpxA-like superfamily GO:0008666|GO:0009089|GO:0016740 G3DSA:1.10.166.10|G3DSA:2.160.10.10|MF_00811|PF00132|PF14602|PF14805|PS00101|SSF51161|TIGR00965 BD65_1199 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020911 Uncharacterised protein family UPF0325 MF_01519|PD080106|PF11944 BD65_12 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008269|IPR014721|IPR020568 Peptidase S16, Lon proteolytic domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0006508 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF05362|PF13654|PR00830|SSF54211 BD65_120 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000524|IPR004839|IPR015421|IPR015422|IPR015424|IPR036388|IPR036390 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|Transcription regulator HTH, GntR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 BD65_1200 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001094|IPR008254|IPR029039 Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein-like superfamily GO:0010181|GO:0055114 G3DSA:3.40.50.360|PF00258|PR00369|SSF52218 BD65_1201 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006145|IPR006224|IPR020103 Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.2350.10|PF00849|PS01129|SSF55120 BD65_1202 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007384|IPR023376|IPR036814 Protein of unknown function UCP006257|YqcC-like domain|YqcC-like superfamily G3DSA:1.20.1440.40|PF04287|PIRSF006257|SSF158452 BD65_1203 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009948|IPR038228 Syd|Syd superfamily GO:0009898 G3DSA:3.40.1580.20|MF_01104|PF07348 BD65_1204 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016428|IPR029139|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00817|PF14489|PF14819|PIRSF004750|SSF55620|TIGR03138 BD65_1205 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021826|IPR027820|IPR031100|IPR037153 Domain of unknown function DUF3412|LOG family|Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal|Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily G3DSA:3.30.1850.10|G3DSA:3.40.50.450|PF03641|PF11892|PF14793|SSF102405 BD65_1206 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002421|IPR008918|IPR020045|IPR020046|IPR022895|IPR029060|IPR036279 5'-3' exonuclease, C-terminal domain superfamily|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase I-like, H3TH domain|Flap endonuclease Xni|Helix-hairpin-helix motif, class 2|PIN-like domain superfamily GO:0003677|GO:0003824|GO:0048256 G3DSA:1.10.150.20|G3DSA:3.40.50.1010|MF_01192|PF01367|PF02739|SM00279|SM00475|SSF47807|SSF88723 BD65_1207 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002877|IPR011224|IPR029063 Ribosomal RNA large subunit methyltransferase M|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168|GO:0032259 G3DSA:3.30.2300.20|G3DSA:3.30.70.2810|G3DSA:3.40.50.150|MF_01551|PF01728|PIRSF028774|SSF53335 BD65_1208 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006696 Protein of unknown function DUF423 PF04241 BD65_1209 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_121 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424|IPR017652 Acetyl/Succinylornithine transaminase family, bacteria|Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0006520|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PIRSF000521|PS00600|SSF53383|TIGR00707|TIGR03246 BD65_1210 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR022471 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulphurase, catalytic subunit, CsdA|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0016226|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PS00595|SSF53383|TIGR03392 BD65_1211 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003808|IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE|Fe-S metabolism associated domain, SufE-like G3DSA:3.90.1010.10|PF02657|SSF82649|TIGR03391 BD65_1212 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000594|IPR035985 THIF-type NAD/FAD binding fold|Ubiquitin-activating enzyme GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 BD65_1213 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005300|IPR010611|IPR026044|IPR036908 3D domain|Lytic transglycosylase MltA, domain B|Membrane-bound lytic murein transglycosylase A|RlpA-like domain superfamily GO:0004553|GO:0009254|GO:0019867 G3DSA:2.40.240.50|G3DSA:2.40.40.10|PF03562|PF06725|PIRSF019422|SM00925|SSF50685 BD65_1217 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002508|IPR021731 AMIN domain|N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 G3DSA:2.60.40.3500|G3DSA:3.40.630.40|PF01520|PF11741|SM00646|SSF53187 BD65_1218 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR001048|IPR010167|IPR016181|IPR036393 Acetylglutamate kinase-like superfamily|Acyl-CoA N-acyltransferase|Amino-acid N-acetyltransferase|Aspartate/glutamate/uridylate kinase|GNAT domain GO:0004042|GO:0005737|GO:0006526 G3DSA:3.40.1160.10|G3DSA:3.40.630.30|MF_01105|PF00583|PF00696|PIRSF000423|SSF53633|SSF55729|TIGR01890 BD65_1219 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006344|IPR027417|IPR027785 P-loop containing nucleoside triphosphate hydrolase|RecBCD enzyme subunit RecD|UvrD-like helicase C-terminal domain GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 G3DSA:1.10.10.1020|G3DSA:3.40.50.300|MF_01487|PF13538|PF13604|SSF52540|TIGR01447 BD65_122 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007041|IPR016181|IPR017650 Acyl-CoA N-acyltransferase|Arginine N-succinyltransferase|Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 G3DSA:2.40.40.20|G3DSA:3.40.630.30|MF_01171|PF04958|SSF55729|TIGR03243|TIGR03244 BD65_1220 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004586|IPR011335|IPR011604|IPR014017|IPR027417|IPR034739 Exonuclease, phage-type/RecB, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RecBCD enzyme subunit RecB|Restriction endonuclease type II-like|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0005524|GO:0006281|GO:0008854|GO:0016787 G3DSA:1.10.3170.10|G3DSA:1.10.486.10|G3DSA:3.40.50.300|G3DSA:3.90.320.10|MF_01485|PF00580|PF13361|SSF52540|SSF52980|TIGR00609 BD65_1221 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001431|IPR007863|IPR011249|IPR011765|IPR032632 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, middle/third domain|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PF16187|PS00143|SSF63411 BD65_1222 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006697|IPR011335|IPR013986|IPR027417 DExx box DNA helicase domain superfamily|P-loop containing nucleoside triphosphate hydrolase|RecBCD enzyme subunit RecC|Restriction endonuclease type II-like GO:0008854|GO:0009338 G3DSA:1.10.10.160|G3DSA:1.10.10.990|G3DSA:1.10.486.10|G3DSA:3.40.50.10930|G3DSA:3.40.50.300|MF_01486|PF04257|PIRSF000980|SSF52540|SSF52980|TIGR01450 BD65_1223 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019652 Protein of unknown function DUF2509 PF10713 BD65_1224 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016419 Prepilin peptidase-dependent protein B, predicted PIRSF004525 BD65_1225 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012902 Prokaryotic N-terminal methylation site PF07963|PS00409|SSF54523|TIGR02532 BD65_1226 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000398|IPR020940|IPR023451|IPR036926 Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain|Thymidylate synthase/dCMP hydroxymethylase superfamily GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|SSF55831|TIGR03284 BD65_1227 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|TIGR00544 BD65_1228 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000121|IPR003018|IPR006318|IPR008279|IPR008731|IPR015813|IPR018274|IPR023151|IPR029016|IPR036618|IPR036637 GAF domain|GAF-like domain superfamily|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphohistidine domain superfamily|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, enzyme I-like|PtsI, HPr-binding domain superfamily|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824|GO:0005515|GO:0009401|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.30.450.40|G3DSA:3.50.30.10|PF00391|PF01590|PF02896|PF05524|PR01736|PS00370|PS00742|SM00065|SSF47831|SSF51621|SSF52009|SSF55781|TIGR01417 BD65_1229 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR015797|IPR020084|IPR020476|IPR022927 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily|RNA pyrophosphohydrolase RppH GO:0016787 G3DSA:3.90.79.10|MF_00298|PF00293|PR00502|PS00893|SSF55811 BD65_123 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR017649|IPR029510 Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase|Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0016491|GO:0016620|GO:0043824|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_01174|PF00171|PS00070|PS00687|SSF53720|TIGR03240 BD65_1230 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004230|IPR011335|IPR011337|IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II|DNA mismatch repair MutH/Restriction endonuclease, type II superfamily|DNA mismatch repair protein MutH|Restriction endonuclease type II-like GO:0003677|GO:0004519|GO:0006304 G3DSA:3.40.600.10|MF_00759|PF02976|SM00927|SSF52980|TIGR02248 BD65_1231 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005496 Integral membrane protein TerC GO:0016021 PF03741 BD65_1232 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023210|IPR036812 NADP-dependent oxidoreductase domain|NADP-dependent oxidoreductase domain superfamily G3DSA:3.20.20.100|PF00248|SSF51430 BD65_1233 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR023727|IPR036259 Lysophospholipid transporter LplT|MFS transporter superfamily|Major facilitator superfamily GO:0005886|GO:0016021|GO:0051977|GO:0051978|GO:0055085 G3DSA:1.20.1250.20|MF_01585|PF07690|SSF103473 BD65_1234 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000873|IPR002123|IPR020845|IPR023775|IPR025110 AMP-binding enzyme, C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Bifunctional protein Aas|Phospholipid/glycerol acyltransferase GO:0003824|GO:0006631|GO:0008654|GO:0008779|GO:0008922|GO:0016746 G3DSA:3.30.300.30|G3DSA:3.40.50.12780|MF_01162|PF00501|PF01553|PF13193|PS00455|SM00563|SSF56801|SSF69593 BD65_1235 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain superfamily|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|SM00354|SSF47413|SSF53822 BD65_1236 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022653|IPR022657|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PS00878|PS00879|SSF50621|SSF51419|TIGR01048 BD65_1237 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.290|PF00126|PF03466|SSF46785|SSF53850 BD65_1238 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BD65_1239 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001279|IPR036866 Metallo-beta-lactamase|Ribonuclease Z/Hydroxyacylglutathione hydrolase-like G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BD65_124 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007079|IPR037031 Succinylarginine dihydrolase|Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 G3DSA:3.75.10.20|MF_01172|PF04996|SSF55909|TIGR03241 BD65_1240 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001853|IPR036249 DSBA-like thioredoxin domain|Thioredoxin-like superfamily GO:0015035 G3DSA:3.40.30.10|PF01323|SSF52833 BD65_1242 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001867|IPR016032|IPR036388 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|SM00862|SSF46894 BD65_1244 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR024230 GspL, cytoplasmic actin-ATPase-like domain G3DSA:3.30.420.370|G3DSA:3.30.420.380|PF05134|SSF53067 BD65_1245 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005628|IPR038072 General secretion pathway protein K|GspK, central domain superfamily GO:0009306|GO:0016021 G3DSA:1.10.40.60|G3DSA:3.30.1300.30|PF03934|SSF158544 BD65_1246 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010055|IPR012902 Prokaryotic N-terminal methylation site|Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 G3DSA:3.10.610.10|PF07963|PF11612|PS00409|SSF54523|TIGR01711|TIGR02532 BD65_1247 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.1300.30|SSF54523|TIGR01707 BD65_1249 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000983|IPR010054|IPR012902|IPR013545 Bacterial general secretion pathway protein G-type pilin|General secretion pathway protein G|Prokaryotic N-terminal methylation site|Type II secretion system protein G GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF07963|PF08334|PR00813|SSF54523|TIGR01710|TIGR02532 BD65_125 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007036|IPR016681 Succinylglutamate desuccinylase|Succinylglutamate desuccinylase/aspartoacylase GO:0008270|GO:0009017|GO:0016788|GO:0019544|GO:0019545 G3DSA:3.40.630.10|MF_00767|PF04952|PIRSF017020|SSF53187|TIGR03242 BD65_1250 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001992|IPR003004|IPR018076 GspF/PilC family|Type II secretion system F domain|Type II secretion system conserved site GO:0009306|GO:0016020 G3DSA:1.20.81.30|PF00482|PR00812|PS00874 BD65_1251 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001482|IPR003593|IPR013369|IPR027417|IPR037257 AAA+ ATPase domain|General secretory system II, protein E, N-terminal superfamily|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system GspE|Type II/IV secretion system protein GO:0005524|GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.300.160|G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PS00662|SM00382|SSF160246|SSF52540|TIGR02533 BD65_1252 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001775|IPR004845|IPR004846|IPR005644|IPR013356|IPR038591 GspD/PilQ family|NolW-like|NolW-like superfamily|Type II secretion system GspD|Type II secretion system GspD, conserved site|Type II/III secretion system GO:0008565|GO:0009306|GO:0015627|GO:0015628|GO:0019867 G3DSA:3.30.1370.120|PF00263|PF03958|PR00811|PS00875|TIGR02517 BD65_1253 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:2.30.30.830 BD65_1254 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016032|IPR036388 Signal transduction response regulator, C-terminal effector|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0006355 G3DSA:1.10.10.10|SSF46894 BD65_1257 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|PF03886|SSF159594 BD65_1258 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003399 Mce/MlaD PF02470 BD65_1259 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BD65_126 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001702|IPR001897|IPR023614 Porin domain superfamily|Porin, Gram-negative type|Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 G3DSA:2.40.160.10|PF00267|PR00182|PR00183|SSF56935 BD65_1260 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE GO:0043190 PF02405|TIGR00056 BD65_1262 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149|IPR034762 Aminoacyl-tRNA synthetase, class II (D/K/N)|Bacterial/eukaryotic lysine-tRNA ligase, class II|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PIRSF039101|PR00982|SSF50249|SSF55681|TIGR00499 BD65_1263 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000352|IPR004374|IPR005139 Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|G3DSA:3.30.70.1660|MF_00094|PF00472|PF03462|PS00745|SM00937|SSF75620|TIGR00020 BD65_1264 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001667|IPR003156|IPR004610|IPR038763 Bacterial RecJ exonuclease|DDH domain|DHH phosphoesterase superfamily|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 G3DSA:2.40.50.460|G3DSA:3.10.310.30|G3DSA:3.90.1640.30|PF01368|PF02272|SSF64182|TIGR00644 BD65_1265 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009094|IPR012336|IPR017937|IPR018950|IPR036249 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily|Disulphide bond isomerase, DsbC/G, N-terminal|Thioredoxin, conserved site|Thioredoxin-like fold|Thioredoxin-like superfamily GO:0042597|GO:0045454 G3DSA:3.10.450.70|G3DSA:3.40.30.10|PF10411|PF13098|PS00194|SSF52833|SSF54423 BD65_1266 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002104|IPR004107|IPR010998|IPR011010|IPR011932|IPR013762|IPR023009 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain superfamily|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD GO:0003677|GO:0006310|GO:0009009|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01807|MF_01808|PF00589|PF02899|SSF47823|SSF56349|TIGR02225 BD65_1267 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001226|IPR008254|IPR010086|IPR029039 Flavodoxin, conserved site|Flavodoxin, long chain|Flavodoxin/nitric oxide synthase|Flavoprotein-like superfamily GO:0009055|GO:0010181 G3DSA:3.40.50.360|PF00258|PIRSF038996|PS00201|SSF52218|TIGR01752 BD65_1268 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009883 Inner membrane protein YgfX PD083358|PF07254|PIRSF020653 BD65_1269 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005631|IPR036714 Flavinator of succinate dehydrogenase|Flavinator of succinate dehydrogenase superfamily G3DSA:1.10.150.250|PF03937|SSF109910 BD65_127 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007709|IPR010247 N-formylglutamate amidohydrolase|N-formylglutamate deformylase G3DSA:3.40.630.40|PF05013|SSF53187|TIGR02017 BD65_1270 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006222|IPR017703|IPR023758|IPR028896|IPR029043 Aminomethyltransferase, folate-binding domain|Aminomethyltransferase-like|Glycine cleavage T-protein/YgfZ, C-terminal|YgfZ/GcvT conserved site|tRNA-modifying protein YgfZ GO:0005542|GO:0009451 G3DSA:2.40.30.160|G3DSA:3.30.70.1400|G3DSA:3.30.70.1630|MF_01175|PF01571|PIRSF006487|SSF101790|SSF103025|TIGR03317 BD65_1271 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004254|IPR005744 AdipoR/Haemolysin-III-related|Hly-III GO:0016021|GO:0019835 PF03006|TIGR01065 BD65_1275 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003437|IPR015421|IPR015422|IPR015424|IPR020581 Glycine cleavage system P protein|Glycine dehydrogenase (decarboxylating)|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0004375|GO:0006544|GO:0006546|GO:0055114 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00711|PF02347|SSF53383|TIGR00461 BD65_1276 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002930|IPR003016|IPR011053|IPR017453|IPR033753 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Glycine cleavage system H-protein/Simiate|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|SSF51230|TIGR00527 BD65_1277 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006222|IPR006223|IPR013977|IPR022903|IPR027266|IPR028896|IPR029043 Aminomethyltransferase, folate-binding domain|Aminomethyltransferase-like|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein/YgfZ, C-terminal|Glycine cleavage system T protein|Glycine cleavage system T protein, bacteria GO:0004047|GO:0005515|GO:0006546 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|G3DSA:4.10.1250.10|MF_00259|PF01571|PF08669|PIRSF006487|SSF101790|SSF103025|TIGR00528 BD65_1278 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002938|IPR010971|IPR018168|IPR036188 FAD-binding domain|FAD/NAD(P)-binding domain superfamily|Ubiquinone biosynthesis hydroxylase UbiH/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0006744|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PS01304|SSF51905|TIGR01988 BD65_1279 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002938|IPR010971|IPR011295|IPR018168|IPR036188 2-polyprenyl-6-methoxyphenol 4-hydroxylase|FAD-binding domain|FAD/NAD(P)-binding domain superfamily|Ubiquinone biosynthesis hydroxylase UbiH/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0006744|GO:0008681|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.30.9.50|G3DSA:3.50.50.60|PF01494|PR00420|PS01304|SSF51905|TIGR01984|TIGR01988 BD65_128 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005920|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Imidazolonepropionase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain superfamily GO:0005737|GO:0016787|GO:0016810|GO:0016812|GO:0019556 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_00372|PF01979|SSF51338|SSF51556|TIGR01224 BD65_1280 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000994|IPR001131|IPR001714|IPR007865|IPR029149|IPR036005 Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Creatinase/aminopeptidase-like|Peptidase M24|Peptidase M24, methionine aminopeptidase|Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site GO:0004177|GO:0030145 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF05195|PR00599|PS00491|SM01011|SSF53092|SSF55920 BD65_1281 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011978|IPR036255 Uncharacterised protein family UPF0149|YgfB-like superfamily G3DSA:1.20.120.740|MF_00346|PF03695|SSF101327|TIGR02292 BD65_1282 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007838|IPR023771|IPR036192 Cell division protein ZapA, eubacteria|Cell division protein ZapA-like|Cell division protein ZapA-like superfamily G3DSA:1.10.20.30|G3DSA:1.20.5.50|MF_02012|PF05164|SSF102829 BD65_1283 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002698|IPR024185|IPR037171 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain superfamily|NagB/RpiA transferase-like G3DSA:3.40.50.10420|PF01812|PIRSF006806|SSF100950|TIGR02727 BD65_1284 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006139|IPR006140|IPR029752|IPR029753|IPR036291 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain superfamily GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|PS00671|SSF51735|SSF52283|SSF55021 BD65_1285 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004788|IPR020672|IPR037171 NagB/RpiA transferase-like|Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|SSF100950|SSF75445|TIGR00021 BD65_1286 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR017685|IPR023490|IPR036388|IPR036390 HTH-type transcriptional regulator ArgP|HTH-type transcriptional regulator ArgP, Gammaproteobacteria|LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.290|MF_00513|PF00126|PF03466|PR00039|SSF46785|SSF53850|TIGR03298 BD65_1287 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007497 Protein of unknown function DUF541 G3DSA:3.30.110.170|G3DSA:3.30.70.2970|PF04402 BD65_1288 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001123|IPR004777|IPR023445 Amino acid exporter protein, LeuE-type|Arginine exporter protein ArgO, enterobacteria|L-lysine exporter/arginine exporter GO:0006865|GO:0015181|GO:0015809|GO:0016020|GO:0016021 MF_01901|PF01810|TIGR00948 BD65_1289 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006685|IPR006686|IPR008910|IPR010920|IPR011014|IPR011066|IPR023408 Conserved TM helix|LSM domain superfamily|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS domain superfamily|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, conserved site|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PF05552|PS01246|SSF50182|SSF82689|SSF82861 BD65_129 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000524|IPR010248|IPR011663|IPR028978|IPR036388|IPR036390 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily|Histidine utilization repressor|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0006355|GO:0006547|GO:0045892 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|SM00345|SM00866|SSF46785|SSF64288|TIGR02018 BD65_1290 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000771|IPR006411|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype|Fructose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|SSF51569|TIGR00167|TIGR01520 BD65_1291 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001576|IPR015824|IPR015911|IPR036043 Phosphoglycerate kinase|Phosphoglycerate kinase superfamily|Phosphoglycerate kinase, N-terminal|Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 G3DSA:3.40.50.1260|MF_00145|PF00162|PIRSF000724|PR00477|PS00111|SSF53748 BD65_1292 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006422|IPR020828|IPR020829|IPR020830|IPR020831|IPR036291 D-erythrose-4-phosphate dehydrogenase|Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain superfamily GO:0005737|GO:0016620|GO:0042823|GO:0048001|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_01640|PF00044|PF02800|PIRSF000149|PR00078|PS00071|SM00846|SSF51735|SSF55347|TIGR01532 BD65_1293 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005474|IPR005475|IPR005478|IPR009014|IPR020826|IPR029061|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0004802 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|PS00802|SM00861|SSF52518|SSF52922|TIGR00232 BD65_1295 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017941|IPR036922 Rieske [2Fe-2S] iron-sulphur domain|Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022 BD65_1296 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000183|IPR002985|IPR009006|IPR022644|IPR022653|IPR022657|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Arginine decarboxylase|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0006527|GO:0008295|GO:0008792 G3DSA:1.20.58.930|G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01417|PF02784|PIRSF001336|PR01179|PR01180|PS00878|PS00879|SSF50621|SSF51419|TIGR01273 BD65_1297 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|SSF55973|TIGR01034 BD65_1298 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007272 Sulphur transport domain PF04143 BD65_1299 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007272 Sulphur transport domain PF04143 BD65_13 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009390|IPR013321|IPR035087|IPR035375|IPR038339 Arc-type ribbon-helix-helix|Macrodomain Ter protein, MatP|MatP, C-terminal ribbon-helix-helix domain|MatP, N-terminal|MatP, N-terminal domain superfamily GO:0006355|GO:0043565 G3DSA:1.10.1220.10|G3DSA:1.20.1270.380|MF_01073|PD033720|PF06303|PF17414 BD65_130 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006680|IPR010252|IPR011059|IPR032466 Amidohydrolase-related|Formiminoglutamate deiminase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain superfamily GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556|TIGR02022 BD65_1300 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001845|IPR036388|IPR036390 HTH ArsR-type DNA-binding domain|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|SM00418|SSF46785 BD65_1301 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006640|IPR023483|IPR035240 SprT-like|SprT-like, zinc ribbon domain|Uncharacterised protein family SprT MF_00746|PF10263|PF17283|SM00731 BD65_1302 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007346 Endonuclease I GO:0004518 PF04231|SSF54060 BD65_1303 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like superfamily|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:2.40.240.20|G3DSA:3.40.1280.10|PF04452|PIRSF015601|SSF75217|SSF88697|TIGR00046 BD65_1304 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004215|IPR004218|IPR006284|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|Glutathione synthetase, prokaryotic|Pre-ATP-grasp domain superfamily|Prokaryotic glutathione synthetase, ATP-binding|Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0005524|GO:0005829|GO:0006750 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00162|PF02951|PF02955|SSF52440|SSF56059|TIGR01380 BD65_1305 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003774 Protein of unknown function UPF0301 G3DSA:3.40.1740.10|MF_00758|PF02622|SSF143456 BD65_1307 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005227|IPR006641|IPR012337|IPR037027 Putative pre-16S rRNA nuclease|Ribonuclease H-like superfamily|YqgF/RNase H-like domain|YqgF/RNase H-like domain superfamily GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|SM00732|SSF53098|TIGR00250 BD65_1308 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003010|IPR017755|IPR036526 Carbon-nitrogen hydrolase|Carbon-nitrogen hydrolase superfamily|N-carbamoylputrescine amidase GO:0006596|GO:0006807|GO:0050126 G3DSA:3.60.110.10|PF00795|SSF56317|TIGR03381 BD65_1309 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007466|IPR017754 Agmatine deiminase|Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446|GO:0047632 G3DSA:3.75.10.10|MF_01841|PF04371|SSF55909|TIGR03380 BD65_131 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010282|IPR011051|IPR014710 RmlC-like cupin domain superfamily|RmlC-like jelly roll fold|Uncharacterised protein family HutD/Ves G3DSA:2.60.120.10|PF05962|SSF51182 BD65_1310 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001482|IPR006321|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Pilus retraction protein PilT|Type II/IV secretion system protein GO:0005524 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PS00662|SSF52540|TIGR01420 BD65_1311 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Pyridoxal phosphate homeostasis protein GO:0030170 G3DSA:3.20.20.10|MF_02087|PF01168|PIRSF004848|PS01211|SSF51419|TIGR00044 BD65_1312 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000304|IPR008927|IPR028939|IPR029036|IPR036291 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|NAD(P)-binding domain superfamily|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PS00521|SSF48179|SSF51735|TIGR00112 BD65_1313 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003425 CCB3/YggT GO:0016020 PF02325 BD65_1314 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003746|IPR005228|IPR036591 Conserved hypothetical protein CHP00251|Protein of unknown function DUF167|YggU-like superfamily G3DSA:3.30.1200.10|MF_00634|PF02594|SM01152|SSF69786|TIGR00251 BD65_1315 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|dITP/XTP pyrophosphatase GO:0009143|GO:0017111|GO:0047429 G3DSA:3.90.950.10|MF_01405|PF01725|SSF52972|TIGR00042 BD65_1316 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004559|IPR006638|IPR007197|IPR023404 Elp3/MiaB/NifB|Oxygen-independent coproporphyrinogen III oxidase-like|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|SM00729|SSF102114|TIGR00539 BD65_1317 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021307 Protein of unknown function DUF2884 PF11101 BD65_1318 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012338|IPR015868 Beta-lactamase/transpeptidase-like|Glutaminase GO:0004359|GO:0006541 G3DSA:3.40.710.10|MF_00313|PF04960|SSF56601|TIGR03814 BD65_1319 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007416 Protein of unknown function DUF469 PF04320 BD65_132 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_1320 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003358|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 G3DSA:3.40.50.150|MF_01057|PF02390|SSF53335|TIGR00091 BD65_1321 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000445|IPR003265|IPR003651|IPR004035|IPR004036|IPR005760|IPR011257|IPR015797|IPR023170|IPR029119 A/G-specific adenine glycosylase MutY|DNA glycosylase|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain|MutY, C-terminal|NUDIX hydrolase-like domain superfamily GO:0003677|GO:0003824|GO:0006281|GO:0006284|GO:0016787|GO:0019104|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.90.79.10|PF00633|PF00730|PF14815|PS00764|PS01155|SM00478|SM00525|SSF48150|SSF55811|TIGR01084 BD65_1322 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007457|IPR036766 Fe(II) trafficking protein YggX|Fe(II) trafficking protein YggX superfamily GO:0005506 G3DSA:1.10.3880.10|MF_00686|PD029191|PF04362|PIRSF029827|SSF111148 BD65_1323 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000189|IPR008258|IPR023346|IPR023664|IPR024570 Lysozyme-like domain superfamily|Murein transglycosylase-C|Murein transglycosylase-C, N-terminal|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0009279|GO:0016020|GO:0016798|GO:0016998 G3DSA:1.10.530.10|MF_01616|PF01464|PF11873|PS00922|SSF53955 BD65_1325 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007159|IPR037914 SpoVT-AbrB domain|SpoVT-AbrB domain superfamily GO:0003677 G3DSA:2.10.260.10|PF04014|SM00966|SSF89447 BD65_1326 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003477|IPR011067 Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like GO:0003677 G3DSA:2.30.30.110|PF02452|SSF50118 BD65_1327 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032497|IPR038304 Uncharacterised protein YmgD|YmgD domain superfamily G3DSA:1.10.890.30|PF16456 BD65_133 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|SSF55821 BD65_1330 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002173|IPR011611|IPR017583|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like|Tagatose/fructose phosphokinase GO:0005975|GO:0016773 G3DSA:3.40.1190.20|PF00294|PIRSF000535|PS00583|PS00584|SSF53613|TIGR03168 BD65_1332 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001150|IPR004184|IPR005949|IPR019777 Formate C-acetyltransferase glycine radical, conserved site|Formate acetyltransferase|Glycine radical domain|Pyruvate formate lyase domain GO:0003824|GO:0005737|GO:0005975|GO:0008861 G3DSA:3.20.70.20|PF01228|PF02901|PIRSF000379|PS00850|SSF51998|TIGR01255 BD65_1333 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000890|IPR004372|IPR023865|IPR024917 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site|Propionate kinase GO:0005622|GO:0006082|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|MF_01881|PF00871|PIRSF000722|PR00471|PS01075|PS01076|SSF53067|TIGR00016 BD65_1334 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004694|IPR013057|IPR023726 Amino acid transporter, transmembrane domain|Hydroxy amino acid transporter|Threonine/serine transporter TdcC GO:0006865|GO:0015171|GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 MF_01583|PF01490|TIGR00814 BD65_1335 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000634|IPR001926|IPR005789|IPR036052 Pyridoxal-phosphate dependent enzyme|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine dehydratase, catabolic|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004794|GO:0006520|GO:0006567|GO:0030170 G3DSA:3.40.50.1100|PF00291|PS00165|SSF53686|TIGR01127 BD65_1337 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824 G3DSA:3.30.300.30|G3DSA:3.40.50.12780|PF00501|PS00455|SSF56801 BD65_1338 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR003560|IPR020904|IPR036291 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase|NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0008667|GO:0016491|GO:0019290|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR01397|PS00061|SSF51735|TIGR04316 BD65_1339 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000868|IPR009081|IPR016291|IPR036380|IPR036736 ACP-like superfamily|Isochorismatase|Isochorismatase-like|Isochorismatase-like superfamily|Phosphopantetheine binding ACP domain GO:0003824|GO:0008908 G3DSA:1.10.1200.10|G3DSA:3.40.50.850|PF00550|PF00857|PIRSF001111|PR01398|SSF47336|SSF52499 BD65_1340 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000873|IPR011963|IPR020845|IPR025110 2,3-dihydroxybenzoate-AMP ligase|AMP-binding enzyme, C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008668|GO:0019290 G3DSA:3.30.300.310|G3DSA:3.40.50.12780|PF00501|PF13193|PS00455|SSF56801|TIGR02275 BD65_1341 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004561|IPR005801|IPR015890 ADC synthase|Chorismate-utilising enzyme, C-terminal|Isochorismate synthase GO:0008909|GO:0009058 G3DSA:3.60.120.10|PF00425|SSF56322|TIGR00543 BD65_1342 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002491 ABC transporter periplasmic binding domain G3DSA:3.40.50.1980|PF01497|SSF53807 BD65_1343 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BD65_1344 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000522|IPR037294 ABC transporter, BtuC-like|ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 BD65_1345 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000522|IPR037294 ABC transporter, BtuC-like|ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 BD65_1346 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_1348 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000873|IPR001031|IPR001242|IPR006162|IPR009081|IPR010071|IPR020802|IPR020806|IPR020845|IPR023213|IPR025110|IPR029058|IPR036736 ACP-like superfamily|AMP-binding enzyme, C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Alpha/Beta hydrolase fold|Amino acid adenylation domain|Chloramphenicol acetyltransferase-like domain superfamily|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain|Polyketide synthase, thioesterase domain|Thioesterase GO:0003824|GO:0009058|GO:0016788|GO:0031177 G3DSA:1.10.1200.10|G3DSA:3.30.300.30|G3DSA:3.30.559.10|G3DSA:3.30.559.30|G3DSA:3.40.50.12780|G3DSA:3.40.50.1820|PF00501|PF00550|PF00668|PF00975|PF13193|PS00012|PS00455|SM00823|SM00824|SSF47336|SSF52777|SSF53474|SSF56801|TIGR01733 BD65_1349 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005153|IPR038020 MbtH-like domain|MbtH-like domain superfamily G3DSA:3.90.820.10|PF03621|SM00923|SSF160582 BD65_1350 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000801|IPR013783|IPR014756|IPR021764|IPR029058 Alpha/Beta hydrolase fold|Enterochelin esterase, N-terminal|Immunoglobulin E-set|Immunoglobulin-like fold|Putative esterase GO:0005506|GO:0005737|GO:0006826|GO:0008849 G3DSA:2.60.40.10|G3DSA:3.40.50.1820|PF00756|PF11806|SSF53474|SSF81296 BD65_1351 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000531|IPR010105|IPR012910|IPR036942|IPR037066 TonB-dependent receptor, plug domain|TonB-dependent receptor, plug domain superfamily|TonB-dependent receptor-like, beta-barrel|TonB-dependent receptor-like, beta-barrel domain superfamily|TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01783 BD65_1352 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013708|IPR036291 NAD(P)-binding domain superfamily|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 G3DSA:3.40.50.10860|G3DSA:3.40.50.720|PF08501|SSF51735|SSF53223 BD65_1353 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001867|IPR016032|IPR036388 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|SSF46894 BD65_1355 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 G3DSA:1.20.120.1220|PF01478 BD65_1356 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013974 SAF domain PF08666 BD65_1357 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001775|IPR004846|IPR032789 GspD/PilQ family|Pilus formation protein, N-terminal|Type II/III secretion system GO:0009306 PF00263|PF13629|PR00811|PR01032 BD65_1359 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 BD65_136 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007159|IPR037914 SpoVT-AbrB domain|SpoVT-AbrB domain superfamily GO:0003677 G3DSA:2.10.260.10|PF04014|SM00966|SSF89447 BD65_1360 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001482|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type II/IV secretion system protein G3DSA:3.30.450.380|G3DSA:3.40.50.300|PF00437|SSF52540 BD65_1361 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018076 Type II secretion system F domain PF00482 BD65_1362 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018076 Type II secretion system F domain PF00482 BD65_1363 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|SSF48452 BD65_1364 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012495 TadE-like PF07811 BD65_1365 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031582 Putative tight adherence pilin protein F PF16964 BD65_1366 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR036465 von Willebrand factor A-like domain superfamily SSF53300 BD65_1367 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003400|IPR014170 Biopolymer transport protein ExbD/TolR|TonB system transport protein ExbD type-1 GO:0016020|GO:0022857|GO:0055085 G3DSA:3.30.420.270|PF02472|TIGR02803 BD65_1368 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002898|IPR014164 MotA/TolQ/ExbB proton channel|TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 PF01618|TIGR02797 BD65_1369 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000277|IPR006233|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Cystathionine beta-lyase, bacterial|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0004121|GO:0005737|GO:0006520|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01324 BD65_137 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002716|IPR022907|IPR029060 PIN domain|PIN-like domain superfamily|VapC family GO:0004540 G3DSA:3.40.50.1010|MF_00265|PF01850|SSF88723 BD65_1370 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032816 SNARE associated Golgi protein PF09335 BD65_1371 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR009594|IPR018060 DNA binding HTH domain, AraC-type|Homeobox-like domain superfamily|Transcription regulator HTH, AraC, N-terminal GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF06719|PF12833|SM00342|SSF46689 BD65_1372 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001670|IPR018211 Alcohol dehydrogenase, iron-type, conserved site|Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PS00913|SSF56796 BD65_1374 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018170|IPR020471|IPR023210|IPR036812 Aldo/keto reductase|Aldo/keto reductase, conserved site|NADP-dependent oxidoreductase domain|NADP-dependent oxidoreductase domain superfamily GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00062|PS00063|SSF51430 BD65_1375 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006638|IPR007197|IPR013704|IPR020612|IPR022946|IPR023404|IPR024560 Elp3/MiaB/NifB|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe|Uncharacterised protein family UPF0313|Uncharacterised protein family UPF0313, C-terminal|Uncharacterised protein family UPF0313, N-terminal GO:0003824|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01251|PF04055|PF08497|PF11842|PS01278|SM00729|SSF102114|TIGR03904 BD65_1376 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008972|IPR011706|IPR011707|IPR026589 Cell division protein FtsP|Cupredoxin|Multicopper oxidase, type 2|Multicopper oxidase, type 3 GO:0005507|GO:0016491|GO:0043093|GO:0055114 G3DSA:2.60.40.420|MF_00915|PF07731|PF07732|SSF49503 BD65_1377 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002123|IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase|Phospholipid/glycerol acyltransferase GO:0003841|GO:0008654|GO:0016020|GO:0016746 PF01553|SM00563|SSF69593|TIGR00530 BD65_1378 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002205|IPR005742|IPR006691|IPR013757|IPR013758|IPR013760|IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal|DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat|DNA topoisomerase IV, subunit A, Gram-negative|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain superfamily|Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_00936|PF00521|PF03989|SM00434|SSF101904|SSF56719|TIGR01062 BD65_1379 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003680|IPR029039 Flavodoxin-like fold|Flavoprotein-like superfamily G3DSA:3.40.50.360|PF02525|SSF52218 BD65_1380 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BD65_1381 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001241|IPR002288|IPR003594|IPR005737|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568|IPR036890 DNA gyrase B subunit, C-terminal|DNA topoisomerase IV, subunit B, Gram-negative|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B, C-terminal|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|TOPRIM domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_00938|PF00204|PF00986|PF01751|PF02518|PR00418|PR01098|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01055 BD65_1382 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008886|IPR029058 Alpha/Beta hydrolase fold|Uncharacterised protein family UPF0227/Esterase YqiA G3DSA:3.40.50.1820|PF05728|SSF53474 BD65_1383 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004843|IPR013622|IPR026575|IPR029052 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal|3,5-cyclic adenosine monophosphate phosphodiesterase CpdA|Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0004115|GO:0016787 G3DSA:3.60.21.10|MF_00905|PD587589|PF00149|SSF56300 BD65_1384 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009659 Protein of unknown function DUF1249 PF06853 BD65_1385 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR004385|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily|Nucleoside diphosphate pyrophosphatase GO:0016787|GO:0016818|GO:0046872 G3DSA:3.90.79.10|PF00293|PS00893|SSF55811|TIGR00052 BD65_1386 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01844 BD65_1387 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009576 Biofilm formation YgiB MF_01188|PF06693 BD65_1388 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005494|IPR016185 Glutathionylspermidine synthase, pre-ATP-grasp-like domain|Pre-ATP-grasp domain superfamily G3DSA:3.30.1490.330|PF03738|SSF52440|SSF56059 BD65_1389 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004183|IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type|Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0008270|GO:0016491|GO:0016701|GO:0055114 G3DSA:3.40.830.10|PF02900|PIRSF006157|SSF53213 BD65_139 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain superfamily|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain superfamily|YchF, C-terminal domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|SSF52540|SSF81271|TIGR00092 BD65_1390 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000422|IPR017945 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain superfamily GO:0008686|GO:0009231 G3DSA:3.90.870.10|MF_00180|PF00926|SSF55821|TIGR00506 BD65_1391 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007475 Membrane fusogenic activity PF04380 BD65_1392 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002173|IPR004821|IPR011611|IPR011913|IPR011914|IPR014729|IPR023030|IPR029056 Bifunctional protein HldE|Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Cytidyltransferase-like domain|RfaE bifunctional protein, domain I|RfaE bifunctional protein, domain II|Ribokinase-like|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0005975|GO:0009058|GO:0016773|GO:0016779 G3DSA:3.40.1190.20|G3DSA:3.40.50.620|MF_01603|PF00294|PF01467|PS00583|SSF52374|SSF53613|TIGR00125|TIGR02198|TIGR02199 BD65_1393 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005190|IPR013546|IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme|Glutamate-ammonia ligase adenylyltransferase, repeated domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0008882|GO:0016779 G3DSA:1.10.4050.10|G3DSA:1.20.120.1510|G3DSA:1.20.120.330|G3DSA:3.30.460.10|G3DSA:3.30.460.100|MF_00802|PF03710|PF08335|SSF81301|SSF81593 BD65_1394 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023577|IPR033469 CYTH domain|CYTH-like domain superfamily G3DSA:2.40.320.10|PF01928|SM01118|SSF55154 BD65_1395 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003646|IPR016476 SH3 domain protein|SH3-like domain, bacterial-type G3DSA:2.30.30.40|PF08239|PIRSF006158|SM00287|TIGR04211 BD65_1396 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002646|IPR003607|IPR006674|IPR012006|IPR032828 HD domain|HD/PDEase domain|Poly A polymerase, head domain|tRNA nucleotidyltransferase, proteobacteria|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0001680|GO:0003723|GO:0004810|GO:0005524|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|MF_01261|MF_01262|PF01743|PF01966|PF12627|PIRSF000813|SM00471|SSF81301|SSF81891 BD65_1397 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|TIGR00753 BD65_1398 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006156|IPR006157 Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 G3DSA:3.30.1130.10|PF02152|SM00905|SSF55620|TIGR00525|TIGR00526 BD65_1399 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MF_01043|PF02660|SM01207|TIGR00023 BD65_14 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000498|IPR002368|IPR006664|IPR006665|IPR006690|IPR011250|IPR036737 OmpA-like domain|OmpA-like domain superfamily|Outer membrane protein OmpA-like, transmembrane domain|Outer membrane protein, OmpA|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0005198|GO:0009279|GO:0016021 G3DSA:2.40.160.20|G3DSA:3.30.1330.60|PF00691|PF01389|PR01021|PR01022|PS01068|SSF103088|SSF56925 BD65_1400 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000905|IPR017860|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|Peptidase M22, conserved site|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PS01016|SSF53067|TIGR00329|TIGR03723 BD65_1401 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001911|IPR018278|IPR038380 Ribosomal protein S21|Ribosomal protein S21 superfamily|Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.1150|MF_00358|PD005521|PF01165|PR00976|PS01181|TIGR00030 BD65_1402 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002694|IPR006171|IPR006295|IPR013173|IPR013264|IPR016136|IPR019475|IPR030846|IPR036977|IPR037068 DNA Primase, CHC2-type zinc finger|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA primase DnaG, DnaB-binding domain|DNA primase DnaG, bacteria|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|DNA primase, catalytic core, N-terminal domain superfamily|TOPRIM domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779 G3DSA:1.10.860.10|G3DSA:1.20.50.20|G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF08278|PF10410|PF13155|PIRSF002811|SM00400|SM00493|SM00766|SSF117023|SSF56731|SSF57783|TIGR01391 BD65_1403 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR007631|IPR009042|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630|IPR036388 RNA polymerase sigma factor 70, non-essential domain|RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4-like|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.220.120|G3DSA:1.10.601.10|MF_00963|PF00140|PF03979|PF04539|PF04542|PF04545|PF04546|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02393|TIGR02937 BD65_1405 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031339 Domain of unknown function DUF4942 PF13708 BD65_1406 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic PD054142 BD65_1407 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009610 CbtA toxin of type IV toxin-antitoxin system PF06755 BD65_1408 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009320|IPR038025 Antitoxin CbeA|Antitoxin CbeA superfamily GO:0051495 G3DSA:3.30.450.20|PF06154|SSF143737 BD65_141 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001328|IPR018171|IPR036416 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase superfamily|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|PF01195|PS01196|SSF53178|TIGR00447 BD65_1410 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001405|IPR025657 RadC-like JAB domain|Uncharacterised protein family UPF0758 G3DSA:3.40.140.10|PF04002|TIGR00608 BD65_1411 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004914 Antirestriction protein G3DSA:1.10.472.120|PD012854|PF03230 BD65_1412 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic PD034160 BD65_1414 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018356|IPR026881 Transcription regulator, HTH DeoR-type, conserved site|WYL domain GO:0003700|GO:0006355 PF13280|PS00894 BD65_1415 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006073|IPR027417 GTP binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|PF01926|SSF52540 BD65_1416 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002052|IPR003356|IPR004546|IPR022749|IPR029063|IPR038333 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily|Restriction endonuclease, type I, HsdM|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0009007|GO:0009307|GO:0032259 G3DSA:1.20.1260.30|G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|SSF53335|TIGR00497 BD65_1417 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 G3DSA:1.10.287.1120|G3DSA:3.90.220.20|PF01420|SSF116734 BD65_1418 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR026866|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein CR006, P-loop domain PF13166|SSF52540 BD65_1419 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004473|IPR006935|IPR007409|IPR014001|IPR022625|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR|Restriction endonuclease, type I, HsdR, N-terminal|Type-1 restriction enzyme R protein, C-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0009035|GO:0009307|GO:0016787 G3DSA:1.10.10.2110|G3DSA:1.20.58.2040|G3DSA:3.40.50.300|G3DSA:3.90.1570.50|G3DSA:3.90.640.50|PD047574|PF04313|PF04851|PF12008|SM00487|SSF52540|TIGR00348 BD65_142 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019698 Protein of unknown function DUF2583 PF10762 BD65_1421 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004919 Domain of unknown function DUF262 PF03235 BD65_1422 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004919|IPR011089 Domain of unknown function DUF1524|Domain of unknown function DUF262 PD062361|PF03235|PF07510 BD65_1423 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014976|IPR025382 Domain of unknown function DUF4297|Protein of unknown function DUF1837 PF08878|PF14130 BD65_1424 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001650|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF00271|SM00487|SM00490|SSF52540 BD65_1425 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001270|IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|ClpA/B family|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PR00300|SM00382|SSF52540 BD65_1426 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR006120|IPR009057|IPR012337|IPR036397 Homeobox-like domain superfamily|Integrase, catalytic core|Resolvase, HTH domain|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0000150|GO:0003676|GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF02796|SSF46689|SSF53098 BD65_1427 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BD65_1428 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic PF11726 BD65_143 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000842|IPR005946|IPR029057|IPR029099|IPR037515 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate pyrophosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain|Ribose-phosphate pyrophosphokinase, bacterial-type GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|SM01400|SSF53271|TIGR01251 BD65_1432 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010260 DNA-binding transcriptional activator AlpA PF05930 BD65_1434 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003812|IPR036597 Fido domain|Fido-like domain superfamily G3DSA:1.10.3290.10|PF02661|SSF140931 BD65_1436 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002104|IPR010998|IPR011010|IPR013762|IPR025166|IPR038488 DNA breaking-rejoining enzyme, catalytic core|Integrase, DNA-binding domain|Integrase, DNA-binding domain superfamily|Integrase, catalytic domain|Integrase-like, catalytic domain superfamily|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|G3DSA:3.30.160.390|PF00589|PF13356|SSF56349 BD65_1437 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR036397 Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 BD65_1438 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527|SSF46689 BD65_1439 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003535|IPR024519|IPR038177 Intimin/invasin bacterial adhesion mediator protein|Inverse autotransporter, beta-domain|Inverse autotransporter, beta-domain superfamily GO:0007155 G3DSA:2.40.160.160|PF11924|PR01369 BD65_144 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568|IPR036554 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|GHMP kinase, C-terminal domain superfamily|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|SSF54211|SSF55060|TIGR00154 BD65_1440 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:2.60.40.2700 BD65_1441 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527|SSF46689 BD65_1442 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR027379 Cardiolipin synthase N-terminal PF13396 BD65_1443 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032710|IPR037401 NTF2-like domain superfamily|SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BD65_1444 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR020904|IPR036291 NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|SSF51735 BD65_1445 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002937|IPR036188 Amine oxidase|FAD/NAD(P)-binding domain superfamily GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|SSF51905 BD65_1446 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010775 Protein of unknown function DUF1365 PF07103 BD65_1447 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003333|IPR029063 Mycolic acid cyclopropane synthase|S-adenosyl-L-methionine-dependent methyltransferase GO:0008610 G3DSA:3.40.50.150|PF02353|PIRSF003085|SSF53335 BD65_1448 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR024409 Protein of unknown function DUF3833 PF12915 BD65_145 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004565|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein LolB GO:0009279|GO:0015031 G3DSA:2.50.20.10|MF_00233|PF03550|SSF89392|TIGR00548 BD65_1454 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006914|IPR025157 Hemagglutinin repeat|VENN motif-containing domain PF04829|PF13332 BD65_1455 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008619|IPR008638|IPR010069|IPR011050|IPR012334|IPR024973 ESPR domain|Filamentous haemagglutinin repeat|Filamentous haemagglutinin, 20-residue x2 repeat|Filamentous haemagglutinin, N-terminal|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05594|PF05860|PF13018|SM00912|SSF51126|TIGR01731|TIGR01901 BD65_1456 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005565|IPR013686|IPR027282|IPR035251 Haemolysin activator HlyB, C-terminal|Polypeptide-transport-associated, ShlB-type|ShlB, POTRA domain|Two partner secretion pathway transporter GO:0015031 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF03865|PF08479|PF17287|PIRSF029745 BD65_1457 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001155|IPR013785|IPR023753|IPR036188 Aldolase-type TIM barrel|FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF00724|PF07992|PR00368|PR00411|SSF51395|SSF51905|SSF51971 BD65_1458 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002052|IPR007848|IPR017237|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase|rRNA (guanine-N2-)-methyltransferase, RsmD GO:0003676|GO:0005737|GO:0008168|GO:0008990|GO:0031167|GO:0032259 G3DSA:3.40.50.150|MF_01859|PF05175|PIRSF037565|PS00092|SSF53335 BD65_1459 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005546|IPR006315|IPR011050|IPR012332|IPR013425|IPR036709 Autotransporter beta-domain|Autotransporter beta-domain superfamily|Autotransporter-associated beta strand repeat|Outer membrane autotransporter barrel|P22 tailspike-like, C-terminal domain superfamily|Pectin lyase fold/virulence factor GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|SSF51126|TIGR01414|TIGR02601 BD65_146 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000343|IPR006151|IPR015895|IPR015896|IPR018214|IPR036291|IPR036343|IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily|Glutamyl-tRNA reductase, N-terminal domain superfamily|Glutamyl-tRNA reductase, conserved site|NAD(P)-binding domain superfamily|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 G3DSA:3.30.460.30|G3DSA:3.40.50.720|MF_00087|PF00745|PF01488|PF05201|PIRSF000445|PS00747|SSF51735|SSF69075|SSF69742|TIGR01035 BD65_1460 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002725 Protein of unknown function DUF45 G3DSA:3.30.2010.10|PF01863 BD65_1461 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000683|IPR036291 NAD(P)-binding domain superfamily|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|SSF51735|SSF55347 BD65_1462 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005496|IPR022369 Integral membrane protein TerC|Integral membrane protein TerC, riboswitch-linked GO:0016021 PF03741|TIGR03718 BD65_1463 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001991|IPR023025|IPR036458 Serine/threonine transporter SstT|Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0015826|GO:0016021|GO:0032329 G3DSA:1.10.3860.10|MF_01582|PF00375|PR00173|SSF118215 BD65_1464 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019629|IPR026267 Inner membrane protein YgjV|Uncharacterised protein family HI1736/YgjV PF10688|PIRSF011443 BD65_1465 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007392|IPR013974 D-galactarate/Altronate dehydratase, C-terminal|SAF domain GO:0016829 G3DSA:3.90.1210.30|PF04295|PF08666|SM00858 BD65_1466 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008927|IPR013118|IPR013131|IPR013328|IPR036291 6-phosphogluconate dehydrogenase, domain 2|6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|NAD(P)-binding domain superfamily GO:0016491|GO:0050662|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01232|PF08125|SSF48179|SSF51735 BD65_1467 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003766|IPR032466 Metal-dependent hydrolase|Uronate isomerase GO:0006064|GO:0008880 G3DSA:1.10.2020.10|G3DSA:3.20.20.140|MF_00675|PF02614|SSF51556 BD65_1468 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BD65_1469 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000524|IPR008920|IPR011711|IPR036388|IPR036390 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BD65_147 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000352|IPR004373|IPR005139 Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|G3DSA:3.30.70.1660|MF_00093|PF00472|PF03462|PS00745|SM00937|SSF75620|TIGR00019 BD65_1471 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032816 SNARE associated Golgi protein PF09335 BD65_1472 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR026574|IPR027398 Modulator protein MzrA|SecD export protein N-terminal TM domain G3DSA:3.30.70.260|MF_00904|PF13721 BD65_1473 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009468 Protein of unknown function DUF1090 PF06476 BD65_1474 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 G3DSA:1.20.120.20|PF05957 BD65_1475 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PF07332 BD65_1476 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025612 YqjK-like protein PF13997 BD65_1477 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032808 DoxX family PF07681 BD65_1478 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.290|PF00126|PF03466|SSF46785|SSF53850 BD65_1479 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003829|IPR011051|IPR012093|IPR014710 Pirin|Pirin, N-terminal domain|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PIRSF006232|SSF51182 BD65_148 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002052|IPR004556|IPR019874|IPR025714|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02126|PF13847|PS00092|SSF53335|TIGR00536|TIGR03534 BD65_1480 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063|IPR035996 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase superfamily|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|SSF53790|TIGR00096 BD65_1481 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007443|IPR011990|IPR028082 Penicillin-binding protein activator LpoA|Periplasmic binding protein-like I|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|G3DSA:1.25.40.650|MF_01890|PF04348|SSF53822 BD65_1482 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003509|IPR011335|IPR011856 Restriction endonuclease type II-like|Uncharacterised protein family UPF0102|tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 G3DSA:3.40.1350.10|MF_00048|PF02021|SSF52980|TIGR00252 BD65_1483 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001347|IPR023070 DnaA initiator-associating protein|Sugar isomerase (SIS) GO:0097367|GO:1901135 G3DSA:3.40.50.10490|MF_01157|PF13580|SSF53697 BD65_1484 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|SM00749 BD65_1485 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001264|IPR011812|IPR023346|IPR036950 Biosynthetic peptidoglycan transglycosylase|Glycosyl transferase, family 51|Lysozyme-like domain superfamily|Penicillin binding protein transglycosylase domain GO:0009252|GO:0009274|GO:0016021|GO:0016763 G3DSA:1.10.3810.10|MF_00766|PF00912|SSF53955|TIGR02070 BD65_1486 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR026041|IPR029062 Class I glutamine amidotransferase-like|Glyoxalase ElbB G3DSA:3.40.50.880|PIRSF006320|SSF52317 BD65_1487 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR013767|IPR014409|IPR027460|IPR035965|IPR036097|IPR036641|IPR036890 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily|CheY-like superfamily|HPT domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|PAS domain|PAS domain superfamily|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004673|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.10.287.970|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF01627|PF02518|PIRSF003182|PR00344|SM00073|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BD65_1488 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005911|IPR006638|IPR007197|IPR023404|IPR032432 Elp3/MiaB/NifB|Protein YhcC-like|Radical SAM|Radical SAM, C-terminal extension|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|PF16199|SM00729|SSF102114|TIGR01212 BD65_1489 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002489|IPR002932|IPR006982|IPR013785|IPR017932|IPR029055|IPR036485 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, alpha subunit, C-terminal domain superfamily|Glutamate synthase, central-N|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal GO:0003824|GO:0006537|GO:0006807|GO:0015930|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.160.20.60|G3DSA:3.20.20.70|G3DSA:3.60.20.10|PF00310|PF01493|PF01645|PF04898|SSF51395|SSF56235|SSF69336 BD65_149 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007360 Invasion gene expression up-regulator, SirB PF04247|PIRSF005610 BD65_1490 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006006|IPR009051|IPR023753|IPR028261|IPR036188 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016491|GO:0016639|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.50.50.60|PF07992|PF14691|PR00419|SSF46548|SSF51971|TIGR01318 BD65_1491 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008638|IPR011050|IPR012334 Filamentous haemagglutinin, N-terminal|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|SM00912|SSF51126|TIGR01901 BD65_1492 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005565|IPR013686 Haemolysin activator HlyB, C-terminal|Polypeptide-transport-associated, ShlB-type G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF03865|PF08479 BD65_1494 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007481|IPR036760 SspB-like superfamily|Stringent starvation protein B G3DSA:2.30.30.220|PF04386|PIRSF005276|SSF101738 BD65_1495 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004045|IPR004046|IPR036249|IPR036282 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal domain superfamily|Glutathione S-transferase, N-terminal|Thioredoxin-like superfamily GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BD65_1496 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|SSF54211 BD65_1497 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005822|IPR005823|IPR023563|IPR036899 Ribosomal protein L13|Ribosomal protein L13 superfamily|Ribosomal protein L13, bacterial-type|Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|PS00783|SSF52161|TIGR01066 BD65_1498 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005654|IPR027417|IPR030870 ATPase, AFG1-like|Cell division protein ZapE|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0051301 G3DSA:3.40.50.300|MF_01919|PF03969|SSF52540 BD65_1499 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009386 Protein of unknown function DUF1043 PF06295|PIRSF006318 BD65_15 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004596|IPR027417 Cell division suppressor protein, SulA|P-loop containing nucleoside triphosphate hydrolase GO:0009432|GO:0051782 G3DSA:3.40.50.300|MF_01179|PF03846|PIRSF003093|SSF52540 BD65_150 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990|IPR032698 Protein SirB1, N-terminal|Tetratricopeptide-like helical domain superfamily GO:0005515 PF13369|PF13371|SSF48452 BD65_1500 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001478|IPR001940|IPR009003|IPR011782|IPR036034 PDZ domain|PDZ superfamily|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.120|PF00595|PF13365|PR00834|SM00228|SSF50156|SSF50494|TIGR02037 BD65_1501 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001478|IPR001940|IPR009003|IPR011783|IPR036034 PDZ domain|PDZ superfamily|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, DegS GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494|TIGR02038 BD65_1502 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001986|IPR005750|IPR013792|IPR036968 Enolpyruvate transferase domain|Enolpyruvate transferase domain superfamily|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|SSF55205|TIGR01072 BD65_1503 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002634|IPR036065 BolA protein|BolA-like superfamily G3DSA:3.30.300.90|PF01722|PIRSF003113|SSF82657 BD65_1504 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002645|IPR036513 STAS domain|STAS domain superfamily G3DSA:3.30.750.24|PF13466|SSF52091 BD65_1505 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC G3DSA:3.10.450.710|PF05494|PIRSF004649 BD65_1506 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003399|IPR030970 Mce/MlaD|Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PF02470|TIGR04430 BD65_1507 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE GO:0043190 PF02405|TIGR00056 BD65_1508 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_1509 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004481|IPR004837 Sodium/calcium exchanger membrane region|Sodium/potassium/calcium exchanger GO:0016021|GO:0055085 G3DSA:1.20.1420.30|G3DSA:1.20.58.1130|PF01699|TIGR00367 BD65_151 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008676|GO:0009058 G3DSA:3.20.20.70|MF_00056|PF00793|SSF51569|TIGR01362 BD65_1510 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000644|IPR001347|IPR004800 CBS domain|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0097367|GO:1901135 G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|SSF53697|TIGR00393 BD65_1511 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010023|IPR023214|IPR036412 HAD superfamily|HAD-like superfamily|KdsC family GO:0016788 G3DSA:3.40.50.1000|PF08282|PIRSF006118|SSF56784|TIGR01670 BD65_1512 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010664|IPR026265 Lipopolysaccharide assembly, LptC-related|Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 G3DSA:2.60.450.10|MF_01915|PF06835|PIRSF028513|TIGR04409 BD65_1513 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005653|IPR014340 Lipopolysaccharide export system protein LptA|Organic solvent tolerance-like, N-terminal GO:0001530|GO:0015920|GO:0042597 G3DSA:2.60.450.10|MF_01914|PF03968|TIGR03002 BD65_1514 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030921|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540|TIGR04406 BD65_1515 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000394|IPR007046|IPR007634|IPR038709 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding domain|RNA polymerase sigma-54 factor, core-binding domain superfamily GO:0001216|GO:0003677|GO:0006352|GO:0016987 G3DSA:1.10.10.1330|G3DSA:1.10.10.60|PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|TIGR02395 BD65_1516 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003489|IPR036567 Ribosome hibernation promoting factor/RaiA|Ribosome hibernation promotion factor-like GO:0044238 G3DSA:3.30.160.100|PF02482|SSF69754|TIGR00741 BD65_1517 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002178|IPR006320|IPR016152 PTS EIIA type-2 domain|Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN|Phosphotransferase/anion transporter GO:0008982|GO:0009401 G3DSA:3.40.930.10|PF00359|PS00372|SSF55804|TIGR01419 BD65_1518 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005337|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RapZ-like family GO:0005524 MF_00636|PF03668|PIRSF005052|SSF52540 BD65_1519 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000032|IPR001020|IPR035895 HPr-like superfamily|Phosphocarrier protein HPr-like|Phosphotransferase system, HPr histidine phosphorylation site G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|SSF55594|TIGR01003 BD65_152 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001902|IPR002645|IPR011547|IPR018045|IPR036513 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain|STAS domain superfamily|Sulphate anion transporter, conserved site GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PF01740|PS01130|SSF52091|TIGR00815 BD65_1521 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002082|IPR006130|IPR006131|IPR006132|IPR036901 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase superfamily|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|SSF53671|TIGR00670 BD65_1522 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002801|IPR020542|IPR020545|IPR036792|IPR036793 Aspartate carbamoyltransferase regulatory subunit, C-terminal|Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily|Aspartate carbamoyltransferase regulatory subunit, N-terminal|Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily|Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 G3DSA:2.30.30.20|G3DSA:3.30.70.140|MF_00002|PD006194|PF01948|PF02748|SSF54893|SSF57825|TIGR00240 BD65_1523 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006056|IPR006175|IPR019897|IPR035959 RidA family|RidA, conserved site|RutC-like superfamily|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|SSF55298|TIGR00004 BD65_1524 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006047|IPR012769|IPR013780|IPR017853|IPR032091 Glycoside hydrolase superfamily|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Maltogenic Amylase, C-terminal|Trehalose-6-phosphate hydrolase GO:0003824|GO:0005737|GO:0005975|GO:0005993|GO:0008788 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|PF16657|SM00642|SSF51011|SSF51445|TIGR02403 BD65_1525 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001996|IPR003352|IPR011296|IPR018113|IPR036878 Glucose permease domain IIB|Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1|Phosphotransferase system, trehalose-specific IIBC component GO:0008982|GO:0009401|GO:0015574|GO:0015771|GO:0016020|GO:0016021 G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|SSF55604|TIGR00826|TIGR01992 BD65_1526 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000843|IPR010982|IPR012771|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain superfamily|Periplasmic binding protein-like I|Trehalose operon repressor GO:0003677|GO:0005991|GO:0006355|GO:0045892 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|SM00354|SSF47413|SSF53822|TIGR02405 BD65_1527 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001757|IPR004014|IPR006415|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299|IPR036412 Cation-transporting P-type ATPase, N-terminal|HAD superfamily|HAD-like superfamily|P-type ATPase|P-type ATPase, A domain superfamily|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IIIB|P-type ATPase, transmembrane domain superfamily GO:0000166|GO:0015444|GO:0015693|GO:0016021 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00690|PF00702|PR01836|PS00154|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494|TIGR01524 BD65_1530 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001437|IPR023459|IPR028625|IPR029462|IPR036953 Regulator of nucleoside diphosphate kinase|Regulator of nucleoside diphosphate kinase, N-terminal domain|Transcription elongation factor GreA/GreB family|Transcription elongation factor GreA/GreB, C-terminal domain superfamily|Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.286.20|G3DSA:3.10.50.30|MF_00954|PF01272|PF14760|PIRSF006092|SSF54534 BD65_1531 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009155|IPR010980 Cytochrome b562|Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 G3DSA:1.20.120.10|PF07361|PIRSF000029|SSF47175 BD65_1532 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002510|IPR035068|IPR036059 Metalloprotease TldD/PmbA|Metalloprotease TldD/PmbA superfamily|Metalloprotease TldD/PmbA, N-terminal GO:0006508|GO:0008237 G3DSA:3.30.2290.10|PF01523|SSF111283 BD65_1533 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006839|IPR023153 PSPTO4464-like domain superfamily|Ribosome-associated, YjgA G3DSA:1.10.60.30|MF_00765|PF04751|PIRSF016183|SSF158710 BD65_1534 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000468|IPR035905 Barstar (barnase inhibitor)|Barstar-like superfamily G3DSA:3.30.370.10|PF01337|SSF52038 BD65_1535 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000026|IPR001887|IPR016191 Barnase|Guanine-specific ribonuclease N1/T1/U2|Ribonuclease/ribotoxin GO:0003723|GO:0004521|GO:0004540 G3DSA:3.10.450.30|PF00545|PIRSF001013|PR00117|SSF53933 BD65_1536 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010102|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase|Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720|TIGR01780 BD65_1537 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006726|IPR023706 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein|Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0022857|GO:0046942|GO:0055085 MF_01545|PF04632 BD65_1538 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006143|IPR022871|IPR039562 Membrane fusion protein, biotin-lipoyl like domain|Para-hydroxybenzoic acid efflux pump, subunit AaeA|RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 G3DSA:2.40.30.170|G3DSA:2.40.50.100|MF_01544|PF13437|PF13533|SSF111369|TIGR01730 BD65_1539 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012451 Protein of unknown function DUF1656 MF_01546|PF07869 BD65_154 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BD65_1540 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.290|PF00126|PF03466|SSF46785|SSF53850 BD65_1541 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002510|IPR025502|IPR035068|IPR036059 Metalloprotease TldD/PmbA|Metalloprotease TldD/PmbA superfamily|Metalloprotease TldD/PmbA, N-terminal|TldD GO:0006508|GO:0008237 G3DSA:3.30.2290.10|PF01523|PIRSF004919|SSF111283 BD65_1542 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003010|IPR036526 Carbon-nitrogen hydrolase|Carbon-nitrogen hydrolase superfamily GO:0006807 G3DSA:3.60.110.10|PF00795|SSF56317 BD65_1543 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011836|IPR025263|IPR032712 AsmA-like, C-terminal|Conserved hypothetical protein CHP02099|Domain of unknown function DUF3971 PF13116|PF13502|TIGR02099 BD65_1544 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003029|IPR004659|IPR012340|IPR019307|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006396 G3DSA:2.40.50.140|G3DSA:3.40.1260.20|PF00575|PF10150|SM00316|SSF50249|TIGR00757 BD65_1545 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0047429 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 BD65_1546 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007227|IPR026034 Cell shape-determining protein MreD|Cell shape-determining protein MreD, proteobacterial type GO:0008360|GO:0016021 PF04093|PIRSF018472|TIGR03426 BD65_1547 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007221 Rod shape-determining protein MreC GO:0008360 G3DSA:2.40.10.340|G3DSA:2.40.10.350|PF04085|PIRSF038471|TIGR00219 BD65_1548 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004753 Cell shape determining protein MreB GO:0000902 G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF06723|PR01652|SSF53067|TIGR00904 BD65_1549 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000160|IPR001633|IPR029787|IPR033423|IPR035919 EAL domain|EAL domain superfamily|GGDEF domain|Gammaproteobacterial periplasmic sensor domain GAPES4|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PF17157|SM00052|SM00267|SSF141868|SSF55073 BD65_1550 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011032|IPR013149|IPR013154|IPR014188|IPR020843|IPR036291 Acrylyl-CoA reductase AcuI|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like superfamily|NAD(P)-binding domain superfamily|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735|TIGR02823 BD65_1551 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000572|IPR022867|IPR036374 Oxidoreductase, molybdopterin-binding domain|Oxidoreductase, molybdopterin-binding domain superfamily|Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0042128|GO:0043546|GO:0055114 G3DSA:3.90.420.10|MF_01206|PF00174|SSF56524 BD65_1552 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013130|IPR022837 Ferric reductase transmembrane component-like domain|Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 MF_01207|PF01794 BD65_1553 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001874|IPR018509|IPR036441 Dehydroquinase, class II|Dehydroquinase, class II superfamily|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|SSF52304|TIGR01088 BD65_1554 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000089|IPR001249|IPR001882|IPR011053 Acetyl-CoA biotin carboxyl carrier|Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif GO:0003989|GO:0006633|GO:0009317 G3DSA:2.40.50.100|PF00364|PR01071|PS00188|SSF51230|TIGR00531 BD65_1555 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain superfamily|Rudiment single hybrid motif GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 BD65_1556 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010398 Protein of unknown function DUF997 PD745092|PF06196 BD65_1557 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001734|IPR011849|IPR018212|IPR038377 Sodium/glucose symporter superfamily|Sodium/pantothenate symporter|Sodium/solute symporter|Sodium/solute symporter, conserved site GO:0015081|GO:0015233|GO:0015887|GO:0016020|GO:0016021|GO:0022857|GO:0036376|GO:0055085 G3DSA:1.20.1730.10|PF00474|PS00456|PS00457|TIGR00813|TIGR02119 BD65_1558 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004498|IPR029063 Ribosomal protein L11 methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0006479|GO:0008276 G3DSA:3.40.50.150|MF_00735|PF06325|PIRSF000401|SSF53335|TIGR00406 BD65_1559 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001269|IPR004652|IPR013785|IPR018517|IPR024036 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, TIM-barrel, NifR3|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|PF01207|PIRSF006621|PS01136|SSF51395|TIGR00737 BD65_156 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF03009|SSF51695 BD65_1560 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002197|IPR005412|IPR009057 DNA binding HTH domain, Fis-type|DNA-binding protein Fis|Homeobox-like domain superfamily GO:0003677|GO:0006355|GO:0043565 G3DSA:1.10.10.60|MF_00166|PF02954|PIRSF002097|PR01590|PR01591|SSF46689 BD65_1562 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004960|IPR011920|IPR030857 Bacterial lipid A biosynthesis acyltransferase|Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase|Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009245|GO:0009409|GO:0016021|GO:0016740|GO:0036104 MF_01942|MF_01943|PF03279|PIRSF026649|TIGR02207 BD65_1563 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001765|IPR015892|IPR036874 Carbonic anhydrase|Carbonic anhydrase superfamily|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|SM00947|SSF53056 BD65_1564 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007300 CidB/LrgB family PF04172 BD65_1565 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005538 LrgA/CidA family GO:0016021 PF03788 BD65_1566 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.290|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_1567 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004705|IPR006153|IPR038770 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family, bacteria|Sodium/solute symporter superfamily GO:0006812|GO:0015299|GO:0016021|GO:0055085 G3DSA:1.20.1530.20|PF00999|TIGR00831 BD65_1568 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PF00860 BD65_1569 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004045|IPR004046|IPR036249|IPR036282 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal domain superfamily|Glutathione S-transferase, N-terminal|Thioredoxin-like superfamily GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF14497|SSF47616|SSF52833 BD65_1571 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PIRSF002070|SSF50249|TIGR00621 BD65_1572 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR004602|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.190.20|G3DSA:3.40.50.300|MF_00205|PF00005|PS00211|SSF52540|TIGR00630 BD65_1573 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007351|IPR038056 Uncharacterised protein YjbR|YjbR-like superfamily G3DSA:3.90.1150.30|PF04237|SSF142906 BD65_1574 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000796|IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Aspartate/other aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0006520|GO:0008483|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PR00799|PS00105|SSF53383 BD65_1576 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|SM01005|SSF50621|SSF51419|TIGR00492 BD65_1577 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003593|IPR007692|IPR007693|IPR007694|IPR016136|IPR027417|IPR036185 AAA+ ATPase domain|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|DNA helicase, DnaB-like, N-terminal domain superfamily|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|SM00382|SSF48024|SSF52540|TIGR00665 BD65_1578 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002364|IPR011032|IPR013149|IPR013154|IPR020843|IPR036291 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like superfamily|NAD(P)-binding domain superfamily|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS01162|SM00829|SSF50129|SSF51735 BD65_1579 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014318 Phage shock protein, PspG PF09583|TIGR02975 BD65_158 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000109|IPR005279|IPR036259 Dipeptide/tripeptide permease|MFS transporter superfamily|Proton-dependent oligopeptide transporter family GO:0015833|GO:0016020|GO:0022857|GO:0055085|GO:1904680 G3DSA:1.20.1250.20|PF00854|SSF103473|TIGR00924 BD65_1580 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001269|IPR004653|IPR013785|IPR018517 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0003824|GO:0008033|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.20.120.1460|G3DSA:3.20.20.70|MF_02041|PF01207|PIRSF006621|PS01136|SSF51395|TIGR00742 BD65_1581 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002481|IPR036388|IPR036390 Ferric-uptake regulator|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.1490.190|PF01475|SSF46785 BD65_1582 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006197|IPR006199|IPR006200|IPR015927|IPR036286|IPR036388|IPR036390 LexA repressor, DNA-binding domain|LexA/Signal peptidase-like superfamily|Peptidase S24, LexA-like|Peptidase S24/S26A/S26B/S26C|Transcription regulator LexA|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0004252|GO:0006355|GO:0006508|GO:0009432|GO:0045892 G3DSA:1.10.10.10|G3DSA:2.10.109.10|MF_00015|PF00717|PF01726|PR00726|SSF46785|SSF51306|TIGR00498 BD65_1583 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000829|IPR036945 DAGK family|Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0008654|GO:0016020|GO:0016301 G3DSA:1.10.3830.10|PF01219|PS01069 BD65_1584 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002123|IPR022284|IPR028354 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase|Glycerol-3-phosphate acyltransferase, PlsB|Phospholipid/glycerol acyltransferase GO:0004366|GO:0005886|GO:0008374|GO:0008654|GO:0016746|GO:0044255 MF_00393|PF01553|PIRSF000437|PIRSF500064|SM00563|SSF69593|TIGR03703 BD65_1585 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000537|IPR006370|IPR030470 4-hydroxybenzoate polyprenyltransferase-like|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0004659|GO:0016021|GO:0016765 G3DSA:1.10.357.140|MF_01635|PF01040|PS00943|TIGR01474 BD65_1586 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007440|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily|Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 G3DSA:3.40.1410.10|MF_01632|PF04345|SSF64288 BD65_1587 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 PF07148 BD65_1588 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003192|IPR023738|IPR036998 Maltoporin|Porin, LamB-type|Porin, LamB-type superfamily GO:0009279|GO:0015288|GO:0015481|GO:0015768|GO:0016020|GO:0034219|GO:0042956|GO:0042958 G3DSA:2.40.170.10|MF_01301|PD008788|PF02264|SSF56935 BD65_1589 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005524|GO:0016887|GO:0022857|GO:0043190|GO:0055085 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BD65_159 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006140|IPR036291 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|NAD(P)-binding domain superfamily GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|SSF51735 BD65_1591 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006059|IPR006060|IPR006061 Bacterial extracellular solute-binding protein|Maltose/Cyclodextrin ABC transporter, substrate-binding protein|Solute-binding family 1, conserved site GO:0008643|GO:0015144|GO:0055085 G3DSA:3.40.190.10|PF13416|PR00181|PS01037|SSF53850 BD65_1592 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR029345|IPR035277|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MalF, N-terminal|Maltose transport system permease protein MalF, P2 domain|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|G3DSA:1.20.58.370|G3DSA:2.40.430.10|G3DSA:3.10.650.10|PF00528|PF14785|SSF160964|SSF161098 BD65_1593 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_1594 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009315|IPR020948 Phosphate-starvation-induced PsiE|Phosphate-starvation-induced PsiE-like GO:0016021|GO:0016036 MF_01048|PF06146|PIRSF029598 BD65_1595 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001672|IPR018189|IPR023096 Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, C-terminal|Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 G3DSA:1.10.1390.10|G3DSA:3.40.50.10490|MF_00473|PF00342|PR00662|PS00174|PS00765|SSF53697 BD65_1597 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001048|IPR001341|IPR005260|IPR018042|IPR036393 Acetylglutamate kinase-like superfamily|Aspartate kinase|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase GO:0004072|GO:0008652|GO:0009089 G3DSA:1.20.120.1320|G3DSA:3.30.70.260|G3DSA:3.40.1160.10|PF00696|PIRSF000726|PS00324|SSF53633|SSF55021|TIGR00656|TIGR00657 BD65_1598 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005565|IPR013686|IPR027282|IPR035251 Haemolysin activator HlyB, C-terminal|Polypeptide-transport-associated, ShlB-type|ShlB, POTRA domain|Two partner secretion pathway transporter GO:0015031 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF03865|PF08479|PF17287|PIRSF029745 BD65_1599 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008638|IPR011050|IPR012334|IPR025157 Filamentous haemagglutinin, N-terminal|Hemagglutinin repeat|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|PF13332|SM00912|SSF51126|TIGR01901 BD65_16 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007076|IPR007077|IPR026256 TfoX, C-terminal|TfoX, N-terminal|Transcriptional regulator, TfoX/Sxy-type G3DSA:1.10.150.20|G3DSA:3.30.1460.30|PF04993|PF04994|PIRSF028788|SSF159894 BD65_160 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003141|IPR004013|IPR016195|IPR023710 PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like|Probable phosphatase YcdX GO:0003824|GO:0008270 G3DSA:3.20.20.140|MF_01561|PF02811|SM00481|SSF89550 BD65_1600 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007577|IPR029044 Glycosyltransferase, DXD sugar-binding motif|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.20|PF04488|SSF53448 BD65_1601 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025351 Protein of unknown function DUF4255 PF14065 BD65_1602 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|SM00382|SSF52540 BD65_1604 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic SSF88874 BD65_1608 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007048 GpW/Gp25/anti-adapter protein IraD G3DSA:3.10.450.40|PF04965|SSF160719 BD65_1609 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR037026 Vgr protein, OB-fold domain superfamily G3DSA:2.40.50.230|PF05954|SSF69255|SSF69279 BD65_161 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020945|IPR026269|IPR036411 DMSO/Nitrate reductase chaperone|Tat proofreading chaperone DmsD-type|TorD-like superfamily G3DSA:1.10.3480.10|PF02613|PIRSF004690|SSF89155 BD65_1612 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010667|IPR011747 Bacteriophage T4, Gp19, tail tube|Conserved hypothetical protein CHP02241 GO:0005198 PF06841|TIGR02241 BD65_1613 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020287 Tail sheath protein, C-terminal domain PF17482 BD65_1614 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020287|IPR035089 Tail sheath protein, C-terminal domain|Tail sheath protein, subtilisin-like domain PF04984|PF17482 BD65_1615 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020287|IPR035089 Tail sheath protein, C-terminal domain|Tail sheath protein, subtilisin-like domain PF04984|PF17482 BD65_1616 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010667|IPR011747 Bacteriophage T4, Gp19, tail tube|Conserved hypothetical protein CHP02241 GO:0005198 PF06841|TIGR02241 BD65_1617 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR036388|IPR036390 Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF00126|SSF46785 BD65_162 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010835 Protein of unknown function DUF1439 G3DSA:3.15.10.40|PF07273 BD65_1620 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000489|IPR003726|IPR003759|IPR004223|IPR006158|IPR011005|IPR011822|IPR036589|IPR036594|IPR036724|IPR037010 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|Cobalamin-binding domain superfamily|Cobalamin-dependent methionine synthase|Dihydropteroate synthase-like|Homocysteine-binding domain|Homocysteine-binding domain superfamily|Methionine synthase domain|Pterin-binding domain|Vitamin B12-dependent methionine synthase, activation domain|Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008270|GO:0008705|GO:0009086|GO:0031419|GO:0042558|GO:0044237|GO:0046872 G3DSA:1.10.1240.10|G3DSA:1.10.288.10|G3DSA:3.10.196.10|G3DSA:3.20.20.20|G3DSA:3.20.20.330|G3DSA:3.40.50.280|PF00809|PF02310|PF02574|PF02607|PF02965|PIRSF000381|SM01018|SSF47644|SSF51717|SSF52242|SSF56507|SSF82282|TIGR02082 BD65_1621 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005471|IPR014757|IPR029016|IPR036388|IPR036390 GAF-like domain superfamily|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BD65_1622 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 MF_00747|PD043552|PF06315|PIRSF000719 BD65_1623 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006254|IPR015813|IPR018523 Isocitrate lyase|Isocitrate lyase/phosphorylmutase, conserved site|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824|GO:0004451|GO:0019752 G3DSA:3.20.20.60|PF00463|PIRSF001362|PS00161|SSF51621|TIGR01346 BD65_1624 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001465|IPR006252|IPR011076 Malate synthase|Malate synthase A|Malate synthase-like superfamily GO:0003824|GO:0004474|GO:0006097 G3DSA:1.20.1220.12|G3DSA:3.20.20.360|PF01274|PIRSF001363|SSF51645|TIGR01344 BD65_1625 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005697|IPR029062|IPR033752 Class I glutamine amidotransferase-like|Homoserine O-succinyltransferase MetA|MetA family GO:0005737|GO:0008899|GO:0019281 G3DSA:3.40.50.880|MF_00295|PD037892|PF04204|PIRSF000450|SSF52317|TIGR01001 BD65_163 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR022855|IPR036259 MFS transporter superfamily|Major facilitator superfamily|Multidrug resistance protein MdtH GO:0016021|GO:0055085 G3DSA:1.20.1250.20|MF_01529|PF07690|SSF103473 BD65_1633 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002695|IPR011607|IPR016193|IPR024051|IPR036914 AICAR transformylase, duplicated domain superfamily|Bifunctional purine biosynthesis protein PurH-like|Cytidine deaminase-like|Methylglyoxal synthase-like domain|Methylglyoxal synthase-like domain superfamily GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|SM00798|SM00851|SSF52335|SSF53927|TIGR00355 BD65_1634 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000115|IPR011054|IPR013815|IPR016185|IPR020559|IPR020560|IPR020561|IPR020562|IPR037123 ATP-grasp fold, subdomain 1|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, C-domain superfamily|Phosphoribosylglycinamide synthetase, N-terminal|Phosphoribosylglycinamide synthetase, conserved site|Pre-ATP-grasp domain superfamily|Rudiment single hybrid motif GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PS00184|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 BD65_1635 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010858 Protein of unknown function DUF1481 PF07356 BD65_1636 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|SM00411|SSF47729 BD65_1637 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007338|IPR023381 Protein of unknown function DUF416|YP001051499.1-like domain superfamily G3DSA:1.20.1590.10|PF04222 BD65_1638 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007581 Endonuclease V GO:0004519|GO:0006281 G3DSA:3.30.2170.10|MF_00801|PF04493 BD65_1639 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000257|IPR006361|IPR038071 UROD/MetE-like superfamily|Uroporphyrinogen decarboxylase (URO-D)|Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 G3DSA:3.20.20.210|MF_00218|PF01208|PS00906|PS00907|SSF51726|TIGR01464 BD65_164 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF13302|SSF55729 BD65_1640 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR015376|IPR015797|IPR020084|IPR022925 NADH pyrophosphatase NudC|NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily|Zinc ribbon, NADH pyrophosphatase GO:0000210|GO:0016787|GO:0046872 G3DSA:3.90.79.10|G3DSA:3.90.79.20|MF_00297|PF00293|PF09297|PS00893|SSF55811 BD65_1641 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007448|IPR023785|IPR038309 Regulator of RNA polymerase sigma(70) subunit, Rsd|Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ|Rsd/AlgQ superfamily GO:0006355 G3DSA:1.20.120.1370|MF_01181|PF04353|PIRSF016548 BD65_1642 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002817|IPR025747|IPR037509|IPR038521 Phosphomethylpyrimidine synthase|Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B|ThiC-associated domain|ThiC/Bza superfamily GO:0009228|GO:0016830|GO:0051536 G3DSA:3.20.20.540|MF_00089|PF01964|PF13667|TIGR00190 BD65_1643 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013785|IPR022998|IPR034291|IPR036206 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase|Thiamine phosphate synthase/TenI GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|SSF51391|TIGR00693 BD65_1644 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000594|IPR035985 THIF-type NAD/FAD binding fold|Ubiquitin-activating enzyme GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 BD65_1645 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain superfamily|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|Sulfur carrier ThiS/MoaD-like|ThiS, thiamine-biosynthesis G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01683 BD65_1646 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008867|IPR013785|IPR033983 Aldolase-type TIM barrel|Thiazole synthase|Thiazole synthase ThiG GO:0003824|GO:0009228 G3DSA:3.20.20.70|MF_00443|PF05690|SSF110399 BD65_1647 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007197|IPR010722|IPR012726|IPR013785 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Radical SAM|Thiazole biosynthesis ThiH GO:0003824|GO:0005506|GO:0009228|GO:0051536|GO:0051539 G3DSA:3.20.20.70|PF04055|PF06968|SM00876|SSF102114|TIGR02351 BD65_1648 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000909|IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily|Phosphatidylinositol-specific phospholipase C, X domain GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF00388|SM00148|SSF51695 BD65_1649 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000909|IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily|Phosphatidylinositol-specific phospholipase C, X domain GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF00388|SM00148|SSF51695 BD65_165 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007432|IPR036388|IPR036390 Protein of unknown function DUF480|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily G3DSA:1.10.10.10|MF_01584|PF04337|SSF46785 BD65_1650 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754|IPR038120 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase Rpb1, funnel domain superfamily|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:1.10.132.30|G3DSA:1.10.150.390|G3DSA:1.10.1790.20|G3DSA:1.10.274.100|G3DSA:1.10.40.90|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|SM00663|SSF64484|TIGR02386 BD65_1651 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR019462|IPR037033|IPR037034 DNA-directed RNA polymerase beta subunit, bacterial-type|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2, hybrid-binding domain|DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 2 superfamily|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|G3DSA:3.90.1800.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|SSF64484|TIGR02013 BD65_1652 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000206|IPR008932|IPR013823|IPR014719|IPR036235 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation|Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 BD65_1653 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001790|IPR002363|IPR022973 Ribosomal protein L10|Ribosomal protein L10, eubacterial, conserved site|Ribosomal protein L10P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0042254 G3DSA:3.30.70.1730|MF_00362|PD968187|PF00466|PS01109|SSF160369 BD65_1654 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002143|IPR005878|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|SSF56808|TIGR01169 BD65_1655 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000911|IPR006519|IPR020783|IPR020784|IPR020785|IPR036769|IPR036796 Ribosomal protein L11, C-terminal|Ribosomal protein L11, C-terminal domain superfamily|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11, conserved site|Ribosomal protein L11/L12|Ribosomal protein L11/L12, N-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PS00359|SM00649|SSF46906|SSF54747|TIGR01632 BD65_1656 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722|IPR015869|IPR036735 KOW|NusG, N-terminal|NusG, N-terminal domain superfamily|Ribosomal protein L2, domain 2|Transcription antitermination protein, NusG|Transcription antitermination protein, NusG, bacteria, conserved site|Translation protein SH3-like domain superfamily GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|PS01014|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 BD65_1657 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001901|IPR005807|IPR038379 Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex, bacterial-like|SecE superfamily GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|PR01650|PS01067|TIGR00964 BD65_1658 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu-like, domain 2|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation protein, beta-barrel domain superfamily GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 BD65_166 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000683|IPR036291 NAD(P)-binding domain superfamily|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|SSF51735|SSF55347 BD65_1664 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004566|IPR006083|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Pantothenate kinase|Phosphoribulokinase/uridine kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937|GO:0016301 G3DSA:3.40.50.300|MF_00215|PF00485|PIRSF000545|SSF52540|TIGR00554 BD65_1665 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003142|IPR004143|IPR004408|IPR004409|IPR008988|IPR013196|IPR030855|IPR036388|IPR036390 Bifunctional ligase/repressor BirA|Biotin operon repressor, helix-turn-helix domain|Biotin protein ligase, C-terminal|Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Helix-turn-helix, type 11|Transcriptional repressor, C-terminal|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0004077|GO:0006355|GO:0006464 G3DSA:1.10.10.10|G3DSA:2.30.30.100|G3DSA:3.30.930.10|MF_00978|PF02237|PF03099|PF08279|SSF46785|SSF50037|SSF55681|TIGR00121|TIGR00122 BD65_1666 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003170|IPR006094|IPR011601|IPR016167|IPR016169|IPR036318|IPR036635 FAD linked oxidase, N-terminal|FAD-binding, type PCMH, subdomain 1|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|SSF56176|SSF56194|TIGR00179 BD65_167 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ MF_02078|PF03023|PIRSF002869|PR01806|TIGR01695 BD65_1672 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR026816|IPR029039 Flavodoxin domain|Flavoprotein-like superfamily G3DSA:3.40.50.360|PF12724|SSF52218 BD65_1673 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003445|IPR004772 Cation transporter|TrkH potassium transport family GO:0006812|GO:0008324|GO:0015379|GO:0016021|GO:0055085|GO:0071805 PF02386|PIRSF006247|TIGR00933 BD65_1674 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001498|IPR015269|IPR015796|IPR020568|IPR020569|IPR035647|IPR036956 EF-G domain III/V-like|Impact family, bacterial/archaeal|Impact, N-terminal|Impact, N-terminal domain superfamily|Ribosomal protein S5 domain 2-type fold|Uncharacterised domain UPF0029, Impact, C-terminal|Uncharacterised protein family UPF0029, Impact, conserved site G3DSA:3.30.230.30|G3DSA:3.30.70.240|PF01205|PF09186|PS00910|SSF54211|SSF54980|TIGR00257 BD65_1675 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000994|IPR001131|IPR022846|IPR029149|IPR036005 Creatinase/Aminopeptidase P/Spt16, N-terminal|Creatinase/aminopeptidase-like|Peptidase M24|Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site|Xaa-Pro dipeptidase GO:0016795 G3DSA:3.40.350.10|G3DSA:3.90.230.10|MF_01279|PF00557|PS00491|SSF55920 BD65_1676 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001753|IPR006108|IPR006176|IPR006180|IPR008927|IPR012799|IPR018376|IPR029045|IPR036291 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|ClpP/crotonase-like domain superfamily|Enoyl-CoA hydratase/isomerase|Enoyl-CoA hydratase/isomerase, conserved site|Fatty oxidation complex, alpha subunit FadB|NAD(P)-binding domain superfamily GO:0003824|GO:0003857|GO:0004165|GO:0004300|GO:0006631|GO:0008692|GO:0009062|GO:0016491|GO:0036125|GO:0055114 G3DSA:1.10.1040.50|G3DSA:3.40.50.720|G3DSA:3.90.226.10|MF_01621|PF00378|PF00725|PF02737|PS00067|PS00166|SSF48179|SSF51735|SSF52096|TIGR02437 BD65_1677 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002155|IPR012805|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Acetyl-CoA C-acyltransferase FadA|Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0003988|GO:0005737|GO:0006631|GO:0016042|GO:0016747 G3DSA:3.40.47.10|MF_01620|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|SSF53901|TIGR01930|TIGR02445 BD65_1678 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001221|IPR001433|IPR008333|IPR017938|IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain|Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain|Oxidoreductase FAD/NAD(P)-binding|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00410|SSF52343|SSF63380 BD65_1679 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002830|IPR023677 UbiD decarboxylyase family|UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694|GO:0016831 G3DSA:1.20.5.570|G3DSA:3.40.1670.10|MF_01636|PF01977|SSF143968|SSF50475|TIGR00148 BD65_168 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005565|IPR013686|IPR027282|IPR035251 Haemolysin activator HlyB, C-terminal|Polypeptide-transport-associated, ShlB-type|ShlB, POTRA domain|Two partner secretion pathway transporter GO:0015031 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF03865|PF08479|PF17287|PIRSF029745 BD65_1680 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011614|IPR020835|IPR024168 Catalase core domain|Catalase superfamily|Catalase, SrpA-type, predicted GO:0004096|GO:0020037|GO:0055114 G3DSA:1.20.1280.120|G3DSA:2.40.180.20|PF00199|PIRSF000296|SM01060|SSF56634 BD65_1681 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006645|IPR010215|IPR036735 NusG, N-terminal|NusG, N-terminal domain superfamily|Transcription antitermination protein RfaH GO:0006355 G3DSA:3.30.70.940|MF_00951|PF02357|SM00738|SSF82679|TIGR01955 BD65_1682 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001731|IPR013785|IPR030656 Aldolase-type TIM barrel|Delta-aminolevulinic acid dehydratase|Delta-aminolevulinic acid dehydratase, active site GO:0003824|GO:0004655|GO:0033014|GO:0046872 G3DSA:3.20.20.70|PF00490|PIRSF001415|PR00144|PS00169|SM01004|SSF51569 BD65_1683 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001130|IPR018228|IPR024918|IPR032466 3'-5' ssDNA/RNA exonuclease TatD|Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family GO:0008408|GO:0016788|GO:0016888 G3DSA:3.20.20.140|MF_00901|PF01026|PIRSF005902|PS01090|PS01091|SSF51556 BD65_1684 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002033|IPR019820 Sec-independent periplasmic protein translocase TatC|Sec-independent periplasmic protein translocase, conserved site GO:0016021 MF_00902|PF00902|PR01840|PS01218|TIGR00945 BD65_1685 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 MF_00237|PR01506|TIGR01410 BD65_1686 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|PF02416|TIGR01411 BD65_1687 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004147|IPR010232|IPR011009 Probable protein kinase UbiB|Protein kinase-like domain superfamily|UbiB domain GO:0006744 MF_00414|PF03109|SSF56112|TIGR01982 BD65_1688 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003033|IPR036527 SCP2 sterol-binding domain|SCP2 sterol-binding domain superfamily PF02036|SSF55718 BD65_1689 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004033|IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PS01183|PS01184|SSF53335|TIGR01934 BD65_169 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008638|IPR011050|IPR012334|IPR025157 Filamentous haemagglutinin, N-terminal|Hemagglutinin repeat|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|PF13332|SM00912|SSF51126|TIGR01901 BD65_1690 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003798 DNA recombination RmuC PF02646 BD65_1691 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032816 SNARE associated Golgi protein PF09335 BD65_1692 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003706|IPR025299 CstA, C-terminal domain|CstA, N-terminal domain GO:0009267|GO:0016020 PF02554|PF13722 BD65_1693 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR026893|IPR029021 Protein-tyrosine phosphatase-like|Tyrosine/serine-protein phosphatase IphP-type G3DSA:3.90.190.10|PF13350|SSF52799 BD65_1694 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000845|IPR010058|IPR018016|IPR035994 Nucleoside phosphorylase domain|Nucleoside phosphorylase superfamily|Nucleoside phosphorylase, conserved site|Uridine phosphorylase GO:0003824|GO:0004850|GO:0005737|GO:0009116|GO:0009166|GO:0016763 G3DSA:3.40.50.1580|PF01048|PS01232|SSF53167|TIGR01718 BD65_1695 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 BD65_1696 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002629|IPR006276|IPR013215|IPR038071 Cobalamin-independent methionine synthase|Cobalamin-independent methionine synthase MetE, C-terminal/archaeal|Cobalamin-independent methionine synthase MetE, N-terminal|UROD/MetE-like superfamily GO:0003871|GO:0008270|GO:0008652|GO:0009086 G3DSA:3.20.20.210|MF_00172|PF01717|PF08267|PIRSF000382|SSF51726|TIGR01371 BD65_1697 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620|IPR004779 Carboxylate/Amino Acid/Amine Transporter|EamA domain GO:0016020|GO:0016021 PF00892|SSF103481|TIGR00950 BD65_1698 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_1699 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF03009|SSF51695 BD65_17 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010019|IPR010020|IPR032692 Integral membrane protein YccS, N-terminal|Integral membrane protein, YccS|Integral membrane protein, YccS/YhfK PF12805|PF13515|TIGR01666|TIGR01667 BD65_170 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022231 Protein of unknown function DUF3757 PF12582 BD65_1700 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005524|GO:0016887|GO:0022857|GO:0043190|GO:0055085 G3DSA:2.40.50.140|G3DSA:2.40.50.940|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BD65_1701 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_1702 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_1703 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006059|IPR006061 Bacterial extracellular solute-binding protein|Solute-binding family 1, conserved site GO:0055085 G3DSA:3.40.190.10|PF13416|PS01037|SSF53850 BD65_1704 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007540 Fimbrial major subunit, CS1-type GO:0009289 PF04449 BD65_1705 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032636 Pilus assembly protein, E-set like domain PF16967 BD65_1706 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008962|IPR013783 Immunoglobulin-like fold|PapD-like superfamily G3DSA:2.60.40.10|SSF49354 BD65_1707 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10 BD65_171 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729|IPR035684|IPR036695 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|Arginyl tRNA synthetase N-terminal domain superfamily|Arginyl-tRNA synthetase, catalytic core domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 BD65_1710 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030660 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|High-affinity branched-chain amino acid transport ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015658|GO:0015803|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039137|PS00211|SM00382|SSF52540 BD65_1711 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540 BD65_1712 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001851|IPR021807 ABC transporter, permease|High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal GO:0016020|GO:0022857|GO:0055085 PF02653|PF11862 BD65_1713 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PF02653 BD65_1714 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BD65_1715 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004381|IPR018193|IPR018197|IPR036129 Glycerate kinase|Glycerate kinase superfamily|Glycerate kinase, flavodoxin-like fold|Glycerate kinase, restriction-enzyme-like fold GO:0008887|GO:0031388 G3DSA:3.40.50.10350|G3DSA:3.90.1510.10|PF02595|PIRSF006078|SSF110738|TIGR00045 BD65_1716 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181|IPR032900 Acyl-CoA N-acyltransferase|GNAT domain|PanD regulatory factor PanZ GO:0015940|GO:0031638 G3DSA:3.40.630.30|MF_02018|PF12568|SSF55729 BD65_1717 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PF02447 BD65_1718 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008599|IPR025736 PucR C-terminal helix-turn-helix domain|Putative sugar diacid recognition G3DSA:1.10.10.2840|PF05651|PF13556 BD65_1719 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000943|IPR007627|IPR007630|IPR009042|IPR012759|IPR013324|IPR013325|IPR014284|IPR036388 RNA polymerase sigma factor RpoH, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4-like|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.20.120.1810|MF_00961|PF00140|PF04542|PF04545|PIRSF000770|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02392|TIGR02937 BD65_172 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010393|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Protein of unknown function DUF991 G3DSA:3.10.180.10|PF06185|SSF54593 BD65_1720 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003838|IPR004513 ABC transporter permease protein domain|Cell division protein FtsX GO:0016020|GO:0016021 PF02687|PIRSF003097|TIGR00439 BD65_1721 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR005286|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Cell division protein FtsE, ATP-binding|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0051301 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR02673 BD65_1722 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417|IPR036225 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|SRP/SRP receptor, N-terminal|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|PS00300|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 BD65_1723 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|SSF53335|TIGR00095 BD65_1724 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009525 Protein of unknown function DUF1145 PF06611 BD65_1725 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019635 Protein of unknown function DUF2500 G3DSA:2.40.50.660|PF10694 BD65_1726 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014949 Protein of unknown function DUF1820 PF08850|PIRSF028538 BD65_1727 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012506 YhhN-like GO:0016021 PF07947 BD65_1728 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001757|IPR006121|IPR008250|IPR017969|IPR018303|IPR023214|IPR023298|IPR023299|IPR027256|IPR036163|IPR036412 HAD superfamily|HAD-like superfamily|Heavy metal-associated domain superfamily|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain superfamily|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB|P-type ATPase, transmembrane domain superfamily GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.20|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00941|PS00154|PS01047|PS01229|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01525 BD65_1729 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001455|IPR022931|IPR036868 Sulfur carrier protein TusA|TusA-like domain|TusA-like domain superfamily GO:0002143|GO:0097163 G3DSA:3.30.110.40|MF_00413|PF01206|PS01148|SSF64307 BD65_173 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005627|IPR023648|IPR036822 Copper homeostasis (CutC) domain superfamily|Copper homeostasis CutC domain|Copper homeostasis protein CutC GO:0005507|GO:0055070 G3DSA:3.20.20.380|MF_00795|PF03932|SSF110395 BD65_1730 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003744 Queuosine precursor transporter GO:1990397 MF_02088|PF02592|TIGR00697 BD65_1731 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014894|IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich|Protein DcrB G3DSA:3.40.1000.10|PF08786 BD65_1732 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004017|IPR009051|IPR017753|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Cysteine-rich domain|Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020|GO:0051536 G3DSA:1.10.1060.10|PF02754|PS00198|SSF46548|TIGR03379 BD65_1733 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003953|IPR009158|IPR036188 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain superfamily|Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 G3DSA:3.50.50.60|MF_00753|PF00890|PIRSF000141|SSF51905|TIGR03378 BD65_1734 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000447|IPR006076|IPR007419|IPR017752|IPR036188 BFD-like [2Fe-2S]-binding domain|FAD dependent oxidoreductase|FAD-dependent glycerol-3-phosphate dehydrogenase|FAD/NAD(P)-binding domain superfamily|Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0006072|GO:0009331|GO:0010181|GO:0016491|GO:0046174|GO:0050660|GO:0055114 G3DSA:1.10.10.1100|G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PF04324|PR01001|PS00977|PS00978|SSF51905|TIGR03377 BD65_1735 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000849|IPR005267|IPR011701|IPR021159|IPR036259 Glycerate/sugar phosphate transporter, conserved site|Glycerol-3-phosphate transporter|MFS transporter superfamily|Major facilitator superfamily|Sugar phosphate transporter GO:0015169|GO:0015794|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF07690|PIRSF002808|PS00942|SSF103473|TIGR00712|TIGR00881 BD65_1736 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF03009|SSF51695 BD65_1737 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000150|IPR006379|IPR023214|IPR036412 Cof family|HAD superfamily|HAD-like superfamily|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PS01228|PS01229|SSF56784|TIGR00099|TIGR01484 BD65_1738 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|SSF53474 BD65_1739 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001123|IPR004778 Amino acid exporter protein, LeuE-type|Homoserine/Threonine efflux protein GO:0006865|GO:0016020|GO:0016021 PF01810|TIGR00949 BD65_174 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010017|IPR027555|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (mo5U34)-methyltransferase-like|tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 G3DSA:3.40.50.150|MF_01590|PF08003|SSF53335|TIGR00452 BD65_1740 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001650|IPR002121|IPR004589|IPR006293|IPR010997|IPR011545|IPR014001|IPR018982|IPR027417|IPR032284|IPR036388 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|DNA helicase, ATP-dependent, RecQ type, bacterial|HRDC domain|HRDC-like superfamily|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-like DNA-binding domain superfamily GO:0000166|GO:0003676|GO:0003824|GO:0004003|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0009432|GO:0043140|GO:0044237 G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PF16124|SM00341|SM00487|SM00490|SM00956|SSF47819|SSF52540|TIGR00614|TIGR01389 BD65_1741 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003187|IPR036541 Phospholipase A1|Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 G3DSA:2.40.230.10|PF02253|PR01486|SSF56931 BD65_1742 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain superfamily|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BD65_1743 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620|IPR004626 EamA domain|RarD protein GO:0005887|GO:0016020|GO:0016021 PF00892|SSF103481|TIGR00688 BD65_1744 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002523|IPR004488 Magnesium/cobalt transport protein CorA|Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|PF01544|SSF143865|SSF144083|TIGR00383 BD65_1745 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011051|IPR014710|IPR027565 Cupin fold metalloprotein, WbuC family|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182|TIGR04366 BD65_1746 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009215|IPR013785|IPR015813 Aldolase-type TIM barrel|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily|TIM-barrel domain, IGPS-like GO:0003824 G3DSA:3.20.20.70|PF09370|PIRSF034452|SSF51621 BD65_1747 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008322 Uncharacterised protein family UPF0261 G3DSA:3.40.50.12020|G3DSA:3.40.50.12030|MF_00677|PF06792|PIRSF033271 BD65_1748 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001647|IPR009057 DNA-binding HTH domain, TetR-type|Homeobox-like domain superfamily GO:0003677 G3DSA:1.10.357.10|PF00440|SSF46689 BD65_1749 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005753|IPR013986|IPR014017|IPR027417|IPR034739 DExx box DNA helicase domain superfamily|DNA helicase, ATP-dependent, UvrD type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0004003|GO:0005524|GO:0005737|GO:0006268|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|SSF52540|TIGR01075 BD65_175 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005271|IPR029063 Carboxy-S-adenosyl-L-methionine synthase|S-adenosyl-L-methionine-dependent methyltransferase GO:0002098 G3DSA:3.40.50.150|MF_01589|PF13649|PIRSF006325|SSF53335|TIGR00740 BD65_1750 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006439|IPR023214|IPR036412 HAD hydrolase, subfamily IA|HAD superfamily|HAD-like superfamily GO:0016787 G3DSA:1.20.120.1600|G3DSA:3.40.50.1000|PF00702|SSF56784|TIGR01549 BD65_1751 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002104|IPR004107|IPR010998|IPR011010|IPR011931|IPR013762|IPR023009 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain superfamily|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|SSF47823|SSF56349|TIGR02224 BD65_1752 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007435|IPR029016 GAF-like domain superfamily|Protein of unknown function DUF484 G3DSA:3.30.450.40|PF04340 BD65_1753 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001653|IPR018510 Diaminopimelate epimerase, DapF|Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 G3DSA:3.10.310.10|MF_00197|PF01678|PS01326|SSF54506|TIGR00652 BD65_1754 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032831 Prokaryotic lipoprotein-attachment site PF13627 BD65_1755 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002908|IPR020895|IPR036524 Frataxin conserved site|Frataxin/CyaY|Frataxin/CyaY superfamily GO:0008199|GO:0016226 G3DSA:3.30.920.10|MF_00142|PF01491|PS01344|SM01219|SSF55387|TIGR03421 BD65_1756 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000274|IPR024685|IPR024686 Adenylate cyclase class-I, N-terminal domain|Adenylate cyclase class-I, conserved site|Adenylate cyclase, class-I GO:0004016|GO:0006171 PF01295|PF12633|PIRSF001444|PS01092|PS01093 BD65_1757 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000860|IPR022417|IPR022418|IPR022419|IPR036803 Porphobilinogen deaminase|Porphobilinogen deaminase, C-terminal|Porphobilinogen deaminase, C-terminal domain superfamily|Porphobilinogen deaminase, N-terminal|Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 G3DSA:3.30.160.40|G3DSA:3.40.190.10|MF_00260|PF01379|PF03900|PIRSF001438|PR00151|PS00533|SSF53850|SSF54782|TIGR00212 BD65_1758 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003754|IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase|Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|SSF69618 BD65_1759 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX PF04375 BD65_176 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001129|IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily|Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein G3DSA:1.20.120.550|PF01124|SSF161084 BD65_1760 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005254|IPR010817|IPR011990 HemY, N-terminal|Heme biosynthesis-associated TPR protein|Tetratricopeptide-like helical domain superfamily GO:0005515|GO:0016020|GO:0042168 G3DSA:1.25.40.10|PF07219|SSF48452|TIGR00540 BD65_1766 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0006865|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF00324|PIRSF006060|PS00218 BD65_1767 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004629|IPR023085 Glycosyl transferase WecB/TagA/CpsF|UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009058|GO:0009246|GO:0016758 MF_01001|PF03808|TIGR00696 BD65_1768 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 MF_01003|PF06899 BD65_1769 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 MF_01002|PF07429 BD65_177 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002763|IPR036520 Protein of unknown function DUF72|UPF0759 superfamily G3DSA:3.20.20.410|PF01904|SSF117396 BD65_1770 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002797|IPR032896 Lipid III flippase WzxE|Polysaccharide biosynthesis protein GO:0005886|GO:0009246|GO:0016020 MF_02024|PF01943 BD65_1771 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000653|IPR012749|IPR015421|IPR015422|IPR015424|IPR032894 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|dTDP-4-amino-4,6-dideoxygalactose transaminase WecE|dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like GO:0003824|GO:0009246|GO:0019180 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_02026|PF01041|PIRSF000390|SSF53383|TIGR02379 BD65_1772 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR012752|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 G3DSA:3.40.630.30|MF_02027|PF00583|SSF55729|TIGR02382 BD65_1773 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005835|IPR005907|IPR029044 Glucose-1-phosphate thymidylyltransferase, short form|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0008879|GO:0009058|GO:0016779|GO:0045226 G3DSA:3.90.550.10|PF00483|SSF53448|TIGR01207 BD65_1774 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005888|IPR016040|IPR036291 NAD(P)-binding domain|NAD(P)-binding domain superfamily|dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|SSF51735|TIGR01181 BD65_1775 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR017476|IPR028359|IPR032891|IPR036220|IPR036291 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|NAD(P)-binding domain superfamily|UDP-N-acetyl-D-mannosamine dehydrogenase WecC|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0009246|GO:0016616|GO:0016628|GO:0051287|GO:0055114|GO:0089714 G3DSA:3.40.50.720|MF_02029|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 BD65_1776 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003331|IPR029767|IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB|UDP-N-acetylglucosamine 2-epimerase WecB-like|UDP-N-acetylglucosamine 2-epimerase domain GO:0008761|GO:0009246 G3DSA:3.40.50.2000|MF_02028|PF02350|SSF53756|TIGR00236 BD65_1777 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003856|IPR032895 ECA polysaccharide chain length modulation protein WzzE|Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0009246|GO:0016020|GO:0016021 MF_02025|PF02706|SSF160355 BD65_1778 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000715|IPR012750 Glycosyl transferase, family 4|Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0008963|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MF_02030|PF00953|TIGR02380 BD65_1779 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417|IPR036269 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock domain|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, N-terminal domain superfamily|Rho termination factor, RNA-binding domain|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:1.10.720.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|SM00357|SM00382|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767 BD65_178 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aspartate-tRNA ligase, type 1|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain superfamily|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|SSF50249|SSF55261|SSF55681|TIGR00459 BD65_1780 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005746|IPR013766|IPR017937|IPR036249 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like superfamily GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|SSF52833|TIGR01068 BD65_1781 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR023554|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|ATP-dependent RNA helicase RhlB type|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0004004|GO:0005524 G3DSA:3.40.50.300|MF_00661|PF00270|PF00271|PS00039|SM00487|SM00490|SSF52540 BD65_1782 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003695|IPR022371|IPR023709|IPR030673 Exopolyphosphatase|Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase|Ppx/GppA phosphatase|Pyrophosphatase, GppA/Ppx-type GO:0004309|GO:0006793|GO:0008894|GO:0015974 G3DSA:1.10.3210.10|G3DSA:3.30.420.150|G3DSA:3.30.420.40|MF_01550|PF02541|PIRSF001267|SSF109604|SSF53067|TIGR03706 BD65_1783 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005752|IPR013986|IPR014017|IPR027417|IPR034739 ATP-dependent DNA helicase Rep|DExx box DNA helicase domain superfamily|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0003677|GO:0004003|GO:0005524|GO:0006268|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|MF_01920|PF00580|PF13361|SSF52540|TIGR01074 BD65_1784 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:3.10.50.40|PF13616|SSF54534 BD65_1785 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR036291 6-phosphogluconate dehydrogenase, domain 2|6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|Ketol-acid reductoisomerase|Ketol-acid reductoisomerase, C-terminal|Ketol-acid reductoisomerase, N-terminal|NAD(P)-binding domain superfamily GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00435|PF01450|PF07991|SSF48179|SSF51735|TIGR00465 BD65_1786 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_1787 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003610|IPR031161|IPR036573 Carbohydrate-binding module family 5/12|Carbohydrate-binding module superfamily 5/12|Peptidase family M60 domain GO:0004553|GO:0005576|GO:0005975|GO:0030246 G3DSA:1.10.1740.210|G3DSA:1.10.390.30|G3DSA:2.10.10.20|G3DSA:2.60.120.1250|G3DSA:3.30.160.280|PF13402|SM00495|SM01276|SSF51055 BD65_1788 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000634|IPR001721|IPR001926|IPR005787|IPR036052|IPR038110 Pyridoxal-phosphate dependent enzyme|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine dehydratase, ACT-like domain|Threonine dehydratase, ACT-like domain superfamily|Threonine dehydratase, biosynthetic|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004794|GO:0006520|GO:0009097|GO:0030170 G3DSA:3.40.1020.10|G3DSA:3.40.50.1100|PF00291|PF00585|PS00165|SSF53686|SSF55021|TIGR01124 BD65_1789 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000581|IPR004404|IPR020558|IPR037237 Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site|IlvD/EDD, N-terminal domain GO:0003824|GO:0004160|GO:0009082 G3DSA:3.50.30.80|MF_00012|PF00920|PS00886|PS00887|SSF143975|SSF52016|TIGR00110 BD65_179 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR003564|IPR015797|IPR020084 Dihydroneopterin triphosphate diphosphatase|NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily GO:0008828|GO:0016787|GO:0019177|GO:0046656 G3DSA:3.90.79.10|PF00293|PR01404|PS00893|SSF55811 BD65_1790 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001544|IPR005785|IPR018300|IPR036038 Aminotransferase class IV|Aminotransferase, class IV, conserved site|Aminotransferase-like, PLP-dependent enzymes|Branched-chain amino acid aminotransferase I GO:0003824|GO:0004084|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|SSF56752|TIGR01122 BD65_1791 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:3.30.70.260|PF13710|SSF55021 BD65_1792 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain superfamily|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|SSF52467|SSF52518|TIGR00118 BD65_1793 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000523|IPR001208|IPR003593|IPR004482|IPR020568|IPR025158|IPR027417 AAA+ ATPase domain|MCM domain|Magnesium chelatase ChlI domain|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold GO:0003677|GO:0005524|GO:0006270 G3DSA:3.40.50.300|PF01078|PF13335|PF13541|PR01657|SM00382|SSF52540|SSF54211|TIGR00368 BD65_1794 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007335 Protein of unknown function DUF413 PF04219 BD65_1795 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR020890|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, HdfR|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0006355|GO:0045892 G3DSA:1.10.10.10|G3DSA:3.40.190.10|MF_01233|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_1797 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR025948|IPR036397 HTH-like domain|Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|SSF53098 BD65_1798 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BD65_18 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005185|IPR031308 Inner membrane component domain|Uncharacterised conserved protein UCP028777 PF03733|PIRSF028777 BD65_180 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002876|IPR017856|IPR026564|IPR029072 Integrase-like, N-terminal|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.70.980|MF_00693|PF01709|SSF75625|TIGR01033 BD65_1805 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001920|IPR004391|IPR015942|IPR018187|IPR033134 Asp/Glu racemase|Asp/Glu racemase, active site 1|Asp/Glu racemase, active site 2|Asp/Glu/hydantoin racemase|Glutamate racemase GO:0006807|GO:0008881|GO:0009252|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|MF_00258|PF01177|PS00923|PS00924|SSF53681|TIGR00067 BD65_1806 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000531|IPR010101|IPR010917|IPR012910|IPR036942|IPR037066 TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent receptor, plug domain superfamily|TonB-dependent receptor-like, beta-barrel|TonB-dependent receptor-like, beta-barrel domain superfamily|TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|MF_01531|PF00593|PF07715|PS01156|SSF56935|TIGR01779 BD65_1807 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010280|IPR011869|IPR029063|IPR030390|IPR030391 (Uracil-5)-methyltransferase family|RNA methyltransferase TrmA, active site|RNA methyltransferase TrmA, conserved site|S-adenosyl-L-methionine-dependent methyltransferase|tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0008173|GO:0030697 G3DSA:3.40.1350.30|G3DSA:3.40.50.150|MF_01011|PF05958|PS01230|PS01231|SSF53335|TIGR02143 BD65_1808 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009867 Protein of unknown function DUF1422 PD076479|PF07226 BD65_1809 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001647|IPR009057|IPR023764 DNA-binding HTH domain, TetR-type|Homeobox-like domain superfamily|Transcriptional repressor HTH, FabR GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|MF_01190|PF00440|SSF46689 BD65_181 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002176|IPR012337|IPR020563|IPR036397 Crossover junction endodeoxyribonuclease RuvC|Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0004520|GO:0006281|GO:0006310|GO:0008821 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PS01321|SSF53098|TIGR00228 BD65_1810 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_1811 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001100|IPR004099|IPR016156|IPR022962|IPR023753|IPR036188 FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|FAD/NAD-linked reductase, dimerisation domain superfamily|Pyridine nucleotide-disulphide oxidoreductase, class I|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0009055|GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|MF_00247|PF02852|PF07992|PIRSF000350|PR00368|PR00411|SSF51905|SSF55424 BD65_1812 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002109|IPR011767|IPR011906|IPR013740|IPR014025|IPR036249 Glutaredoxin|Glutaredoxin active site|Glutaredoxin domain|Glutaredoxin subgroup|Redoxin|Thioredoxin-like superfamily GO:0009055|GO:0015035|GO:0016491|GO:0045454 G3DSA:3.40.30.10|PF00462|PF08534|PR00160|PS00195|SSF52833|TIGR02190 BD65_1813 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023753|IPR036188|IPR036324 FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|Manganese/iron superoxide dismutase, N-terminal domain superfamily GO:0016491|GO:0055114 G3DSA:1.10.287.990|G3DSA:3.50.50.60|PF07992|PR00368|PR00411|SSF51905 BD65_1814 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004099|IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|PF02852|PR00411|SSF55424 BD65_1816 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008651|IPR010985 Ribbon-helix-helix|Uncharacterised protein family HicB GO:0006355 PF05534|SSF47598 BD65_1817 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003538|IPR006260|IPR037682 Gram-negative bacterial TonB protein|TonB, C-terminal|TonB/TolA, C-terminal GO:0015343|GO:0015891|GO:0030288|GO:0031992|GO:0055085 G3DSA:3.30.1150.10|PF03544|PR01374|SSF74653|TIGR01352 BD65_1818 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003997|IPR006144|IPR010129|IPR039562 Membrane fusion protein, biotin-lipoyl like domain|RTX secretion protein D, Gram-negative bacteria|Secretion protein HlyD, conserved site|Type I secretion membrane fusion protein, HlyD family GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:1.10.287.470|G3DSA:2.40.30.170|G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PS00543|TIGR01843 BD65_1819 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR010128|IPR011527|IPR017871|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, PrtD|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR01842 BD65_182 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849|IPR036267 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|Helix-hairpin-helix DNA-binding motif, class 1|Holliday junction DNA helicase RuvA, C-terminal|Nucleic acid-binding, OB-fold|RuvA domain 2-like|RuvA, C-terminal domain superfamily GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 BD65_1820 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010495|IPR036912 Haem-binding HasA|Haem-binding HasA superfamily G3DSA:3.30.1500.10|PF06438|SSF54621 BD65_1821 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000531|IPR010949|IPR011276|IPR012910|IPR036942|IPR037066 TonB-dependent haem/haemoglobin receptor|TonB-dependent haemoglobin/transferrin/lactoferrin receptor|TonB-dependent receptor, plug domain|TonB-dependent receptor, plug domain superfamily|TonB-dependent receptor-like, beta-barrel|TonB-dependent receptor-like, beta-barrel domain superfamily GO:0015232|GO:0015886|GO:0019867|GO:0022857|GO:0055085 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01785|TIGR01786 BD65_1822 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000362|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PF14698|PR00145|PR00149|PS00163|SSF48557|TIGR00838 BD65_1823 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001518|IPR014729|IPR018223|IPR023434|IPR024074 Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthase, type 1 subfamily|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold GO:0004055|GO:0005524|GO:0006526 G3DSA:1.20.5.470|G3DSA:3.40.50.620|G3DSA:3.90.1260.10|MF_00005|PF00764|PS00564|PS00565|SSF52402|SSF69864|TIGR00032 BD65_1824 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001048|IPR004662|IPR036393|IPR037528 Acetylglutamate kinase ArgB|Acetylglutamate kinase family|Acetylglutamate kinase-like superfamily|Aspartate/glutamate/uridylate kinase GO:0003991|GO:0005737|GO:0006526 G3DSA:3.40.1160.10|MF_00082|PF00696|PIRSF000728|SSF53633|TIGR00761 BD65_1825 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000534|IPR000706|IPR012280|IPR023013|IPR036291 N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain superfamily|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|PS01224|SM00859|SSF51735|SSF55347|TIGR01850 BD65_1826 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001261|IPR002933|IPR010169|IPR011650|IPR036264 Acetylornithine deacetylase ArgE|ArgE/DapE/ACY1/CPG2/YscS, conserved site|Bacterial exopeptidase dimerisation domain|Peptidase M20|Peptidase M20, dimerisation domain GO:0005737|GO:0006508|GO:0006526|GO:0008237|GO:0008777|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_01108|PF01546|PF07687|PS00758|PS00759|SSF53187|SSF55031|TIGR01892 BD65_1827 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR015813|IPR018129|IPR021135|IPR022805|IPR033129 Phosphoenolpyruvate carboxylase|Phosphoenolpyruvate carboxylase, His active site|Phosphoenolpyruvate carboxylase, Lys active site|Phosphoenolpyruvate carboxylase, bacterial/plant-type|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824|GO:0006099|GO:0008964|GO:0015977 G3DSA:1.20.1440.90|MF_00595|PF00311|PR00150|PS00393|PS00781|SSF51621 BD65_1829 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003171|IPR004620|IPR029041 5,10-methylenetetrahydrofolate reductase|FAD-linked oxidoreductase-like|Methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0006555|GO:0009086|GO:0055114 G3DSA:3.20.20.220|PF02219|SSF51730|TIGR00676 BD65_183 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR027417|IPR036388|IPR036390 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|SM00382|SSF46785|SSF52540|TIGR00635 BD65_1832 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011009 Protein kinase-like domain superfamily G3DSA:1.10.510.10|SSF56112 BD65_1833 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011009 Protein kinase-like domain superfamily SSF56112 BD65_1834 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001048|IPR001341|IPR001342|IPR005106|IPR011147|IPR018042|IPR019811|IPR036291|IPR036393 Acetylglutamate kinase-like superfamily|Aspartate kinase|Aspartate kinase, conserved site|Aspartate/glutamate/uridylate kinase|Aspartate/homoserine dehydrogenase, NAD-binding|Bifunctional aspartokinase/homoserine dehydrogenase I|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain superfamily GO:0004072|GO:0004412|GO:0006520|GO:0008652|GO:0009067|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.20.120.1320|G3DSA:3.30.360.10|G3DSA:3.40.1160.10|G3DSA:3.40.50.720|PF00696|PF00742|PF03447|PIRSF000727|PS00324|PS01042|SSF51735|SSF53633|SSF55347|TIGR00657 BD65_1835 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000277|IPR011821|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-succinylhomoserine (thiol)-lyase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR02080 BD65_1836 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002084|IPR010985|IPR023453 Methionine repressor MetJ|Methionine repressor MetJ domain superfamily|Ribbon-helix-helix GO:0003700|GO:0006355|GO:0006555 G3DSA:1.10.140.10|MF_00744|PD020365|PF01340|SSF47598 BD65_1837 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002150|IPR027491|IPR034704 L28p-like|Ribosomal protein L31|Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.50|MF_00501|PF01197|PR01249|PS01143|SSF143800|TIGR00105 BD65_1838 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001650|IPR005259|IPR011545|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006260|GO:0032508 G3DSA:1.10.8.630|G3DSA:3.40.50.300|MF_00983|PF00270|PF00271|SM00487|SM00490|SSF52540|TIGR00595 BD65_1839 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain superfamily|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|SM00354|SSF47413|SSF53822 BD65_184 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000109|IPR005279|IPR018456|IPR023778|IPR036259 Amino acid/peptide transporter family, dipeptide/tripeptide permease B|Dipeptide/tripeptide permease|MFS transporter superfamily|PTR2 family proton/oligopeptide symporter, conserved site|Proton-dependent oligopeptide transporter family GO:0005215|GO:0006857|GO:0015833|GO:0016020|GO:0022857|GO:0055085|GO:1904680 G3DSA:1.20.1250.20|MF_01879|PF00854|PS01023|SSF103473|TIGR00924 BD65_1840 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007730|IPR011930|IPR036680 Cell division protein FtsN|Sporulation-like domain|Sporulation-like domain superfamily GO:0005515|GO:0042834 G3DSA:3.30.70.1070|MF_02039|PF05036|SSF110997|TIGR02223 BD65_1841 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001353|IPR022281|IPR029055 ATP-dependent protease, HslV subunit|Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0006508|GO:0009376|GO:0051603 G3DSA:3.60.20.10|MF_00248|PF00227|PIRSF039093|SSF56235|TIGR03692 BD65_1842 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003593|IPR003959|IPR004491|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Heat shock protein HslU|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 G3DSA:1.10.8.60|MF_00249|PF00004|PF07724|PF10431|SM00382|SM01086|SSF52540|TIGR00390 BD65_1843 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000537|IPR004657|IPR026046 1,4-dihydroxy-2-naphthoate octaprenyltransferase|UbiA prenyltransferase domain containing protein 1|UbiA prenyltransferase family GO:0004659|GO:0009234|GO:0016021|GO:0016765|GO:0046428 MF_01937|PF01040|PIRSF005355|TIGR00751 BD65_1844 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005493|IPR010203|IPR014339|IPR036704 Regulator of ribonuclease activity A|Regulator of ribonuclease activity A, gammaproteobacteria|Ribonuclease E inhibitor RraA/RraA-like protein|Ribonuclease E inhibitor RraA/RraA-like superfamily GO:0008428|GO:0051252 G3DSA:3.50.30.40|MF_00471|PF03737|SSF89562|TIGR01935|TIGR02998 BD65_1845 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 G3DSA:1.20.5.340|MF_01196|PF06005 BD65_1846 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000425|IPR022357|IPR023271 Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site GO:0015267|GO:0016020|GO:0055085 G3DSA:1.20.1080.10|PF00230|PR00783|PS00221|SSF81338|TIGR00861 BD65_1847 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000577|IPR005999|IPR018483|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Glycerol kinase GO:0004370|GO:0005975|GO:0006072|GO:0016773 G3DSA:3.30.420.40|MF_00186|PF00370|PF02782|PIRSF000538|PS00445|PS00933|SSF53067|TIGR01311 BD65_1848 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 G3DSA:3.30.540.10|G3DSA:3.40.190.90|PF03320|PIRSF004532|SSF56655|TIGR00330 BD65_1849 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1720.10|PF07690|SSF103473 BD65_185 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001626|IPR037294 ABC transporter, BtuC-like|ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 G3DSA:1.10.3470.10|PF00950|SSF81345 BD65_1850 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001433|IPR008333|IPR017938|IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain|Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|SSF52343|SSF63380 BD65_1851 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008523 Protein of unknown function DUF805 GO:0016021 PF05656 BD65_1852 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009918 Protein of unknown function DUF1454 PF07305 BD65_1853 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000652|IPR013785|IPR020861|IPR022896|IPR035990 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase superfamily|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|SSF51351|TIGR00419 BD65_1854 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005669|IPR034408 Sulphate/thiosulphate-binding site|Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419|GO:1901681 G3DSA:3.40.190.10|PF13531|PS00757|SSF53850|TIGR00971 BD65_1855 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000023|IPR012003|IPR012828|IPR015912|IPR022953|IPR035966 ATP-dependent 6-phosphofructokinase|ATP-dependent 6-phosphofructokinase, prokaryotic|ATP-dependent 6-phosphofructokinase, prokaryotic-type|Phosphofructokinase domain|Phosphofructokinase superfamily|Phosphofructokinase, conserved site GO:0003872|GO:0005524|GO:0006002|GO:0006096|GO:0008443 G3DSA:3.40.50.450|G3DSA:3.40.50.460|MF_00339|PF00365|PIRSF000532|PR00476|PS00433|SSF53784|TIGR02482 BD65_1856 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002524|IPR023783|IPR027469|IPR027470|IPR036837 Cation efflux protein|Cation efflux protein, cytoplasmic domain|Cation efflux protein, cytoplasmic domain superfamily|Cation efflux pump FieF|Cation efflux transmembrane domain superfamily GO:0006812|GO:0006829|GO:0008324|GO:0015684|GO:0016021|GO:0046873|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|MF_01425|PF01545|PF16916|SSF160240|SSF161111|TIGR01297 BD65_1857 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007684 Zinc finger, Ogr/Delta-type PF04606 BD65_1858 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic PF05954|SSF69279 BD65_1859 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009734|IPR016912 Bacteriophage P2, GpU|Myoviridae, GpU PF06995|PIRSF029208 BD65_186 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BD65_1860 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010090 Phage tail tape measure protein PF10145|TIGR01760 BD65_1862 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006498 Tail tube protein PF04985|TIGR01611 BD65_1863 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020287|IPR035089 Tail sheath protein, C-terminal domain|Tail sheath protein, subtilisin-like domain PF04984|PF17482 BD65_1865 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011083|IPR022225|IPR037053 Phage tail collar domain|Phage tail collar domain superfamily|Phage tail fibre protein G3DSA:3.90.1340.10|PF07484|PF12571|SSF88874 BD65_1866 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006521 Tail protein I PF09684|TIGR01634 BD65_1867 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006949|IPR014507 Baseplate assembly protein J, predicted|Baseplate protein J-like PF04865|PIRSF020481 BD65_1868 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007048 GpW/Gp25/anti-adapter protein IraD G3DSA:3.10.450.40|PF04965|SSF160719 BD65_1869 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006531|IPR013046|IPR037026 Gp5 N-terminal|Phage baseplate assembly protein V/Gp45|Vgr protein, OB-fold domain superfamily G3DSA:2.40.50.230|G3DSA:2.60.220.40|PF04717|TIGR01644 BD65_187 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|SSF53807 BD65_1871 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006522 Phage virion morphogensis protein PF05069|TIGR01635 BD65_1872 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009678 Bacteriophage tail completion protein R PF06891 BD65_1873 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020000 Bacteriophage P2, LysB TIGR03495 BD65_1874 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002196|IPR023346 Glycoside hydrolase, family 24|Lysozyme-like domain superfamily GO:0003796|GO:0009253|GO:0016998 G3DSA:1.10.530.40|PF00959|SSF53955 BD65_1875 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032118 Bacteriophage holin HP1 family PF16080 BD65_1876 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008861|IPR036779 LysM domain superfamily|Phage Tail Protein X-like G3DSA:3.10.350.10|PF05489 BD65_1877 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009225 Bacteriophage head completion protein GpL GO:0019069 PF05926 BD65_1878 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 PF05944 BD65_1879 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006441 Bacteriophage P2, GpN, major capsid PF05125|TIGR01551 BD65_188 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007340|IPR011055|IPR013731|IPR016047|IPR018392 Duplicated hybrid motif|LysM domain|Opacity-associated protein A|Opacity-associated protein A, N-terminal|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.450.350|PF01551|PF04225|PF08525|SM00257|SSF51261 BD65_1880 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009228 Capsid scaffolding protein GpO GO:0019069 PF05929 BD65_1881 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004921|IPR010332|IPR035421 ATPase terminase subunit, putative|Terminase large subunit, T4likevirus-type|Terminase, large subunit gp17-like GO:0005524|GO:0019069 G3DSA:3.30.420.240|G3DSA:3.40.50.300|PF03237|PF06056|PF17289 BD65_1882 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006430|IPR006944|IPR030935 Bacteriophage/Gene transfer agent portal protein|Phage portal protein PBSX family|Phage portal protein PBSX family, Proteobacteria PF04860|PIRSF018494|TIGR01540 BD65_1883 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:3.30.70.2330 BD65_1884 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012893 HipA-like, C-terminal G3DSA:1.10.1070.20|PF07804 BD65_1885 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012337|IPR033390|IPR036397 3'-5' exoribonuclease Rv2179c-like domain|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676 G3DSA:3.30.420.10|PF16473|SSF53098 BD65_1886 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008766 Replication gene A protein GO:0006260 PF05840 BD65_1888 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020284|IPR035404 Domain of unknown function DUF5405|Protein of unknown function CP83 PD029230|PF17399 BD65_1889 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000962|IPR020458 Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site GO:0008270 G3DSA:1.20.120.910|PF01258|PS01102|SSF57716 BD65_189 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004960|IPR011921 Bacterial lipid A biosynthesis acyltransferase|Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016740|GO:0016747 MF_01944|PF03279|PIRSF026649|TIGR02208 BD65_1890 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR035404 Domain of unknown function DUF5405 PD067735|PF17399 BD65_1891 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020126 Protein of unknown function DUF2732 PD057914|PF10809 BD65_1896 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019679|IPR038147 Cox superfamily|Regulatory phage protein Cox G3DSA:1.10.1660.70|PF10743 BD65_1897 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain superfamily GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BD65_1898 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BD65_1899 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012899 LTXXQ motif family protein GO:0042597 G3DSA:1.20.120.1490|PF07813|PIRSF034445 BD65_19 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014017|IPR022161|IPR027417|IPR034739 DNA helicase IV, N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF00580|PF12462|PF13361|SSF52540 BD65_190 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001697|IPR011037|IPR015793|IPR015795|IPR015806|IPR015813|IPR018209|IPR036918 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, C-terminal domain superfamily|Pyruvate kinase, active site|Pyruvate kinase, barrel|Pyruvate kinase, insert domain superfamily|Pyruvate kinase-like, insert domain superfamily|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|SSF50800|SSF51621|SSF52935|TIGR01064 BD65_1900 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001867|IPR011006|IPR036388 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BD65_1901 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR032404|IPR036097|IPR036890|IPR038515 CpxA, periplasmic domain superfamily|HAMP domain|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor protein CpxA, periplasmic domain GO:0000155|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.210|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF16527|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 BD65_1902 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|SSF75217|TIGR00185 BD65_1903 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001451|IPR005881|IPR010493|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Serine O-acetyltransferase|Serine acetyltransferase, N-terminal|Trimeric LpxA-like superfamily GO:0005737|GO:0006535|GO:0009001|GO:0016740 G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PF06426|PIRSF000441|PS00101|SM00971|SSF51161|TIGR01172 BD65_1904 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR036291 6-phosphogluconate dehydrogenase, domain 2|6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain superfamily GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|SSF48179|SSF51735 BD65_1905 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003708|IPR035958 Bacterial protein export chaperone SecB|SecB-like superfamily GO:0015031|GO:0051082|GO:0051262 G3DSA:3.10.420.10|MF_00821|PF02556|PR01594|SSF54611|TIGR00809 BD65_1906 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002109|IPR011767|IPR011900|IPR014025|IPR036249 Glutaredoxin|Glutaredoxin active site|Glutaredoxin subgroup|Glutaredoxin, GrxC|Thioredoxin-like superfamily GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PR00160|PS00195|SSF52833|TIGR02181 BD65_1907 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001763|IPR036873 Rhodanese-like domain|Rhodanese-like domain superfamily G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 BD65_1908 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005995|IPR006124|IPR011258|IPR017849|IPR017850|IPR036646 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain superfamily|BPG-independent PGAM, N-terminal|BPG-independent phosphoglycerate mutase, domain B superfamily|Metalloenzyme|Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0003824|GO:0004619|GO:0005737|GO:0006007|GO:0030145|GO:0046872 G3DSA:3.40.1450.10|G3DSA:3.40.720.10|MF_01038|PF01676|PF06415|PIRSF001492|SSF53649|SSF64158|TIGR01307 BD65_1909 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 BD65_191 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000281|IPR001347|IPR009057|IPR036388 Helix-turn-helix protein RpiR|Homeobox-like domain superfamily|Sugar isomerase (SIS)|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0006355|GO:0097367|GO:1901135 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|SSF46689|SSF53697 BD65_1910 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006837|IPR011330 Divergent polysaccharide deacetylase|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:3.20.20.370|PF04748|SSF88713 BD65_1911 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002328|IPR004627|IPR011032|IPR013149|IPR013154|IPR020843|IPR036291 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like superfamily|L-threonine 3-dehydrogenase|NAD(P)-binding domain superfamily|Polyketide synthase, enoylreductase domain GO:0006567|GO:0008270|GO:0008743|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|MF_00627|PF00107|PF08240|PS00059|SM00829|SSF50129|SSF51735|TIGR00692 BD65_1912 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001917|IPR004839|IPR011282|IPR015421|IPR015422|IPR015424 2-amino-3-ketobutyrate coenzyme A ligase|Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0006567|GO:0008890|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00985|PF00155|PS00599|SSF53383|TIGR01822 BD65_1913 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001509|IPR011912|IPR036291 ADP-L-glycero-D-manno-heptose-6-epimerase|NAD(P)-binding domain superfamily|NAD-dependent epimerase/dehydratase GO:0003824|GO:0005975|GO:0008712|GO:0050661|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_01601|PF01370|SSF51735|TIGR02197 BD65_1914 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002201|IPR011910 ADP-heptose--LPS heptosyltransferase 2|Glycosyl transferase, family 9 GO:0009103|GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756|TIGR02195 BD65_1915 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002201|IPR011908 Glycosyl transferase, family 9|Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244|GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756|TIGR02193 BD65_1916 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001296|IPR007507|IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal|3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily|Glycosyl transferase, family 1 G3DSA:3.40.50.11720|G3DSA:3.40.50.2000|PF00534|PF04413|SSF53756 BD65_1917 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BD65_1918 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001980|IPR004821|IPR014729 Cytidyltransferase-like domain|Phosphopantetheine adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PD016147|PF01467|PR01020|SSF52374|TIGR00125|TIGR01510 BD65_1919 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010663|IPR010979|IPR012319|IPR015886|IPR015887|IPR020629|IPR035937 DNA glycosylase/AP lyase, H2TH DNA-binding|DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site|Formamidopyrimidine-DNA glycosylase|Formamidopyrimidine-DNA glycosylase, catalytic domain|MutM-like, N-terminal|Ribosomal protein S13-like, H2TH|Zinc finger, FPG/IleRS-type GO:0003676|GO:0003677|GO:0003684|GO:0003906|GO:0006281|GO:0006284|GO:0006289|GO:0008270|GO:0008534|GO:0016799 G3DSA:1.10.8.50|G3DSA:3.20.190.10|MF_00103|PF01149|PF06827|PF06831|PS01242|SM00898|SM01232|SSF46946|SSF57716|SSF81624|TIGR00577 BD65_192 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001282|IPR019796|IPR022674|IPR022675|IPR036291 Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|Glucose-6-phosphate dehydrogenase, active site|NAD(P)-binding domain superfamily GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00966|PF00479|PF02781|PIRSF000110|PR00079|PS00069|SSF51735|SSF55347|TIGR00871 BD65_1920 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001705|IPR011332|IPR018264|IPR038584 Ribosomal protein L33|Ribosomal protein L33 superfamily|Ribosomal protein L33, conserved site|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.20.28.120|MF_00294|PF00471|PS00582|SSF57829|TIGR01023 BD65_1921 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001383|IPR026569|IPR034704|IPR037147 L28p-like|Ribosomal protein L28|Ribosomal protein L28/L24|Ribosomal protein L28/L24 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|SSF143800|TIGR00009 BD65_1922 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001405|IPR010994|IPR020891|IPR022820|IPR025657 RadC-like JAB domain|RuvA domain 2-like|Uncharacterised protein family UPF0758|Uncharacterised protein family UPF0758, YicR subfamily|Uncharacterised protein family UPF0758, conserved site G3DSA:3.40.140.10|MF_00018|PF04002|PS01302|SSF47781|TIGR00608 BD65_1923 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003382|IPR005252|IPR007085|IPR035929|IPR036551 CoaB-like superfamily|Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavin prenyltransferase-like|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|SSF102645|SSF52507|TIGR00521 BD65_1924 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008181|IPR029054|IPR036157 Deoxyuridine triphosphate nucleotidohydrolase|dUTPase-like|dUTPase-like superfamily GO:0004170|GO:0046080 G3DSA:2.70.40.10|MF_00116|PF00692|SSF51283|TIGR00576 BD65_1925 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001647|IPR009057|IPR023769|IPR023772|IPR036271 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeobox-like domain superfamily|Nucleoid occlusion factor SlmA|Tetracyclin repressor-like, C-terminal domain superfamily GO:0003677|GO:0010974 G3DSA:1.10.357.10|MF_01839|PF00440|PS01081|SSF46689|SSF48498 BD65_1926 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000836|IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116 G3DSA:3.40.50.2020|MF_01208|PF00156|SSF53271|TIGR00336 BD65_1927 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001247|IPR002381|IPR015847|IPR018336|IPR020568|IPR027408|IPR036345 Exoribonuclease, PH domain 2 superfamily|Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|PNPase/RNase PH domain superfamily|Ribonuclease PH, bacterial-type|Ribonuclease PH, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000049|GO:0008033|GO:0009022 G3DSA:3.30.230.70|MF_00564|PF01138|PF03725|PS01277|SSF54211|SSF55666|TIGR01966 BD65_1928 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005229|IPR013527|IPR013551 Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal PF03755|PF08340|TIGR00255 BD65_1929 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004695|IPR038665 Voltage-dependent anion channel|Voltage-dependent anion channel superfamily GO:0016021|GO:0055085 G3DSA:1.50.10.150|PF03595 BD65_193 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000887|IPR013785|IPR031337|IPR031338 Aldolase-type TIM barrel|KDPG/KHG aldolase|KDPG/KHG aldolase, active site 1|KDPG/KHG aldolase, active site 2 GO:0003824|GO:0016829 G3DSA:3.20.20.70|PF01081|PS00159|PS00160|SSF51569|TIGR01182 BD65_1930 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.290|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_1931 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR000160|IPR001633|IPR029787|IPR035919|IPR035965 EAL domain|EAL domain superfamily|GGDEF domain|Nucleotide cyclase|PAS domain|PAS domain superfamily G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF13426|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 BD65_1932 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain superfamily|Enoyl-CoA hydratase/isomerase GO:0003824 G3DSA:3.90.226.10|PF00378|SSF52096 BD65_1934 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011657 Concentrative nucleoside transporter C-terminal domain PF07662 BD65_1935 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005115 Uncharacterised domain UPF0126 PF03458 BD65_1936 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR020923|IPR033136 DNA ligase B|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, adenylation|NAD-dependent DNA ligase, conserved site|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003911|GO:0006259|GO:0006260|GO:0006281 G3DSA:2.40.50.140|G3DSA:3.30.470.90|MF_01587|PF01653|PF03120|PS01056|SM00532|SSF47781|SSF50249|SSF56091 BD65_1937 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|SM00072|SSF52540|TIGR03263 BD65_1938 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003716|IPR006110|IPR012293|IPR036161 DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6|RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|MF_00366|PF01192|SM01409|SSF63562|TIGR00690 BD65_1939 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain superfamily|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0015969 G3DSA:1.10.3210.10|G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 BD65_194 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000390|IPR023740 Small multidrug resistance protein family|Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848|GO:0016021 G3DSA:1.10.3730.20|MF_01598|PF00893|SSF103481 BD65_1940 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001537|IPR022724|IPR029026|IPR029028|IPR033671 Alpha/beta knot methyltransferases|RNA methyltransferase, SpoU/TrmH type, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanosine(18)-2'-O)-methyltransferase|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173|GO:0009020|GO:0030488 G3DSA:3.40.1280.10|MF_02060|PF00588|PF12105|SSF75217 BD65_1941 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001650|IPR004609|IPR011545|IPR012340|IPR014001|IPR027417|IPR033454 ATP-dependent DNA helicase RecG|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|RecG, wedge domain GO:0003676|GO:0004003|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PF17191|SM00487|SM00490|SSF50249|SSF52540|TIGR00643 BD65_1942 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 MF_02062|PF03616|TIGR00210 BD65_1943 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006042|IPR006043|IPR017588 Uric acid permease UacT-like|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0016020|GO:0016021|GO:0022857|GO:0055085 PF00860|PS01116|TIGR00801|TIGR03173 BD65_1944 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007844 AsmA PF05170 BD65_1945 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR012660|IPR016181|IPR029069 Acyl-CoA N-acyltransferase|GNAT domain|HotDog domain superfamily|Thioesterase, putative G3DSA:3.10.129.10|G3DSA:3.40.630.30|PF00583|PF09500|SSF54637|SSF55729|TIGR02447 BD65_1946 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003732|IPR023509 D-aminoacyl-tRNA deacylase DTD|D-aminoacyl-tRNA deacylase-like superfamily GO:0002161|GO:0005737|GO:0051499 G3DSA:3.50.80.10|MF_00518|PF02580|SSF69500|TIGR00256 BD65_1947 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017039|IPR023679 Uncharacterised protein family UPF0761, bacterial|Virulence factor BrkB MF_00672|PF03631|PIRSF035875|TIGR00765 BD65_1948 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006439|IPR023198|IPR023214|IPR036412 HAD hydrolase, subfamily IA|HAD superfamily|HAD-like superfamily|Phosphoglycolate phosphatase-like, domain 2 GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01509 BD65_1949 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR027417|IPR031157|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain superfamily GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 BD65_195 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000390|IPR023737 Small multidrug resistance protein family|Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848|GO:0016021 G3DSA:1.10.3730.20|MF_01597|PF00893|SSF103481 BD65_1950 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001637|IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303|IPR036651 Glutamine synthetase class-I, adenylation site|Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, N-terminal domain superfamily|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PS00182|SM01230|SSF54368|SSF55931|TIGR00653 BD65_1951 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013767|IPR035965|IPR036097|IPR036890 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|PAS domain|PAS domain superfamily|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PR00344|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874 BD65_1952 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR010114|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|DNA-binding transcriptional regulator NtrC|Homeobox-like domain superfamily|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0006808|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|SM00382|SM00448|SSF46689|SSF52172|SSF52540|TIGR01818 BD65_1953 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004558|IPR006638|IPR007197|IPR010723|IPR023404 Elp3/MiaB/NifB|HemN, C-terminal|Oxygen-independent coproporphyrinogen III oxidase HemN|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:1.10.10.920|G3DSA:3.80.30.20|PF04055|PF06969|PIRSF000167|SM00729|SSF102114|TIGR00538 BD65_1954 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007336 Der GTPase activator GO:0005096 MF_01058|PF04220 BD65_1955 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|SSF52540|TIGR03598 BD65_1956 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046|IPR029060|IPR036279|IPR036397 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain superfamily|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA polymerase I-like, H3TH domain|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN-like domain superfamily|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PS00447|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 BD65_1957 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001853|IPR017937|IPR023205|IPR036249 DSBA-like thioredoxin domain|Thiol:disulphide interchange protein DsbA/DsbL|Thioredoxin, conserved site|Thioredoxin-like superfamily GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF01323|PIRSF001488|PS00194|SSF52833 BD65_1958 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002575|IPR011009|IPR032882 Aminoglycoside phosphotransferase|Protein kinase-like domain superfamily|SrkA/RdoA protein kinase GO:0004674|GO:0006468 G3DSA:1.10.510.10|G3DSA:1.20.1270.170|G3DSA:3.30.200.70|MF_01497|PF01636|SSF56112 BD65_1959 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009383|IPR038134 Protein of unknown function DUF1040|YihD-like superfamily G3DSA:1.10.1580.20|PD029038|PF06288 BD65_196 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006175|IPR019897|IPR035959 RidA, conserved site|RutC-like superfamily|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|SSF55298 BD65_1960 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013482|IPR025877|IPR029044 MobA-like NTP transferase|Molybdenum cofactor guanylyltransferase|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0006777 G3DSA:3.90.550.10|MF_00316|PF12804|SSF53448|TIGR02665 BD65_1961 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004435|IPR027417 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525|GO:0006777 G3DSA:2.20.25.120|G3DSA:3.40.50.300|PF03205|SSF52540|TIGR00176 BD65_1966 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000524|IPR008920|IPR011711|IPR036388|IPR036390 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BD65_1967 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain superfamily|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|SM00354|SSF47413|SSF53822 BD65_1968 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002139|IPR002173|IPR011611|IPR011877|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase|Ribokinase-like|Ribokinase/fructokinase GO:0004747|GO:0006014|GO:0016301|GO:0016773 G3DSA:3.40.1190.20|MF_01987|PF00294|PR00990|PS00584|SSF53613|TIGR02152 BD65_1969 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BD65_197 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006555|IPR010614|IPR027417 ATP-dependent helicase, C-terminal|DEAD2|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006139|GO:0008026|GO:0016818 G3DSA:3.40.50.300|PF06733|PF13307|SM00491|SSF52540 BD65_1970 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PF02653 BD65_1971 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_1972 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007721|IPR023064|IPR023750 D-ribose pyranase|D-ribose pyranase RbsD/L-fucose mutarotase FucU|RbsD-like superfamily GO:0005996|GO:0016853|GO:0016872|GO:0048029 G3DSA:3.40.1650.10|MF_01661|PF05025|SSF102546 BD65_1973 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705|TIGR00794 BD65_1974 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003593|IPR011704|IPR022547|IPR023671|IPR027417 AAA+ ATPase domain|ATPase RavA|ATPase, RavA, C-terminal|ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0016887|GO:0042626 G3DSA:1.10.8.300|G3DSA:1.20.58.1510|G3DSA:2.40.128.430|G3DSA:3.40.50.300|MF_01625|PF07728|PF12592|SM00382|SSF52540 BD65_1975 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002035|IPR008912|IPR023481|IPR036465 Uncharacterised protein family CoxE-like|Uncharacterised protein family ViaA|von Willebrand factor A-like domain superfamily|von Willebrand factor, type A G3DSA:3.40.50.410|MF_01626|PF05762|SM00327|SSF53300 BD65_1976 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009781 Protein of unknown function DUF1345 PF07077 BD65_1977 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 G3DSA:3.30.930.10|MF_00555|PF03590|PIRSF001555|SSF55681|TIGR00669 BD65_1978 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000485|IPR011008|IPR019885|IPR019887|IPR019888|IPR036388|IPR036390 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 BD65_1979 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001094|IPR008254|IPR029039 Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein-like superfamily GO:0010181|GO:0055114 G3DSA:3.40.50.360|PF00258|PR00369|SSF52218 BD65_198 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 G3DSA:3.30.420.40|PF00814|SSF53067|TIGR03725 BD65_1980 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002218|IPR004416|IPR020595|IPR026904|IPR036188 FAD/NAD(P)-binding domain superfamily|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0050660 G3DSA:1.10.10.1800|G3DSA:1.10.150.570|G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PS01280|PS01281|SM01228|SSF51905|TIGR00136 BD65_1981 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|SSF53335|TIGR00138 BD65_1982 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005598 ATP synthase protein I PF03899 BD65_1983 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000568|IPR023011|IPR035908 ATP synthase, F0 complex, subunit A|ATP synthase, F0 complex, subunit A superfamily|ATP synthase, F0 complex, subunit A, active site GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|PS00449|SSF81336|TIGR01131 BD65_1984 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000454|IPR002379|IPR005953|IPR020537|IPR035921|IPR038662 ATP synthase, F0 complex, subunit C|ATP synthase, F0 complex, subunit C, DCCD-binding site|ATP synthase, F0 complex, subunit C, bacterial/chloroplast|F/V-ATP synthase subunit C superfamily|F1F0 ATP synthase subunit C superfamily|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PS00605|SSF81333|TIGR01260 BD65_1985 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002146|IPR005864|IPR028987 ATP synthase, F0 complex, subunit b, bacterial|ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast|F-type ATP synthase subunit B-like, membrane domain superfamily GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.5.620|MF_01398|PF00430|SSF81573|TIGR01144 BD65_1986 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000711|IPR020781|IPR026015 ATPase, OSCP/delta subunit|ATPase, OSCP/delta subunit, conserved site|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily GO:0015986|GO:0016020|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|PS00389|SSF47928|TIGR01145 BD65_1987 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417|IPR036121|IPR038376 ATP synthase subunit alpha, N-terminal domain-like superfamily|ATP synthase, F1 complex, alpha subunit|ATP synthase, alpha subunit, C-terminal|ATP synthase, alpha subunit, C-terminal domain superfamily|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0045261|GO:0046034|GO:0046933|GO:1902600 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PIRSF039088|PS00152|SSF47917|SSF50615|SSF52540|TIGR00962 BD65_1988 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000131|IPR023632|IPR035968 ATP synthase, F1 complex, gamma subunit|ATP synthase, F1 complex, gamma subunit conserved site|ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PR00126|PS00153|SSF52943|TIGR01146 BD65_1989 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000194|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417|IPR036121 AAA+ ATPase domain|ATP synthase, F1 complex, beta subunit|ATPase, F1/V1 complex, beta/alpha subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0045261|GO:0046034|GO:0046933|GO:1902600 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PS00152|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 BD65_199 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004658 Outer membrane lipoprotein Slp GO:0019867 PF03843|PIRSF004982|TIGR00752 BD65_1990 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001469|IPR020546|IPR020547|IPR036771|IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain|ATP synthase delta/epsilon subunit, C-terminal domain superfamily|ATP synthase, F1 complex, delta/epsilon subunit|ATP synthase, F1 complex, delta/epsilon subunit, N-terminal|F0F1 ATP synthase delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933 G3DSA:1.20.5.440|G3DSA:2.60.15.10|MF_00530|PD000944|PF00401|PF02823|SSF46604|SSF51344|TIGR01216 BD65_1991 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001451|IPR005882|IPR011004|IPR018357|IPR025877|IPR029044 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide repeat|Hexapeptide transferase, conserved site|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like superfamily GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0016740|GO:0019134 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|PS00101|SSF51161|SSF53448|TIGR01173 BD65_1992 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0097367|GO:1901135|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|SSF53697|SSF56235|TIGR01135 BD65_1993 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002686|IPR036515 Transposase IS200-like|Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|SM01321|SSF143422 BD65_1996 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005673|IPR024370 PBP domain|Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 G3DSA:3.40.190.10|PF12849|PIRSF002756|SSF53850|TIGR00975 BD65_1997 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR011864|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016020|GO:0016021|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR02138 BD65_1998 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR005672|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0016020|GO:0035435|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00974 BD65_1999 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR00972 BD65_2 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001295|IPR005719|IPR005720|IPR012135|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1/ 2|Dihydroorotate dehydrogenase, class 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0006222|GO:0016020|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00225|PF01180|PIRSF000164|PS00911|PS00912|SSF51395|TIGR01036 BD65_20 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004363|IPR011607|IPR018148|IPR036914 Methylglyoxal synthase|Methylglyoxal synthase, active site|Methylglyoxal synthase-like domain|Methylglyoxal synthase-like domain superfamily GO:0008929|GO:0019242 G3DSA:3.40.50.1380|MF_00549|PF02142|PIRSF006614|PS01335|SM00851|SSF52335|TIGR00160 BD65_200 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme, C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824 G3DSA:3.30.300.310|G3DSA:3.40.50.12780|PF00501|PF13193|PS00455|SSF56801 BD65_2000 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR026022|IPR028366|IPR038078 PhoU domain|PhoU-like domain superfamily|Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 G3DSA:1.20.58.220|PF01895|PIRSF003107|SSF109755|TIGR02135 BD65_2001 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SSF53850 BD65_2002 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR010065|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|MetI-like superfamily GO:0016020|GO:0016021|GO:0022857|GO:0043190|GO:0055085|GO:0071705 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BD65_2003 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR010065|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|MetI-like superfamily GO:0016020|GO:0016021|GO:0022857|GO:0043190|GO:0055085|GO:0071705 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BD65_2004 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006043|IPR026033 Purine permease PbuG-like|Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PF00860|PIRSF005353 BD65_2005 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003660|IPR004089|IPR033479 Double Cache domain 1|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF02743|SM00283|SM00304|SSF58104 BD65_2006 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000259|IPR008966|IPR036937 Adhesion domain superfamily|Fimbrial-type adhesion domain|Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF00419|SSF49401 BD65_2007 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001829|IPR008962|IPR013783|IPR016147|IPR016148|IPR018046|IPR036316 Immunoglobulin-like fold|PapD-like superfamily|Pili assembly chaperone, C-terminal|Pili assembly chaperone, C-terminal domain superfamily|Pili assembly chaperone, N-terminal|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site GO:0030288|GO:0043711|GO:0061077|GO:0071555 G3DSA:2.60.40.10|PF00345|PF02753|PR00969|PS00635|SSF49354|SSF49584 BD65_2008 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000015|IPR018030|IPR025885|IPR025949|IPR037224 Fimbrial membrane usher, conserved site|Outer membrane usher protein|PapC, N-terminal domain|PapC, N-terminal domain superfamily|PapC-like, C-terminal domain GO:0005515|GO:0009297|GO:0015473|GO:0016020 G3DSA:2.60.40.2070|G3DSA:2.60.40.2610|G3DSA:2.60.40.3110|G3DSA:3.10.20.410|PF00577|PF13953|PF13954|PS01151|SSF141729 BD65_2009 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000259|IPR008966|IPR036937 Adhesion domain superfamily|Fimbrial-type adhesion domain|Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 G3DSA:2.60.40.1090|G3DSA:2.60.40.3310|PF00419|SSF49401 BD65_201 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002121|IPR002562|IPR006292|IPR010997|IPR012337|IPR036397 3'-5' exonuclease domain|HRDC domain|HRDC-like superfamily|Ribonuclease D|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0000166|GO:0003676|GO:0003824|GO:0005622|GO:0006139|GO:0008033|GO:0008408|GO:0033890|GO:0044237 G3DSA:1.10.150.80|G3DSA:3.30.420.10|MF_01899|PF00570|PF01612|SM00341|SM00474|SSF47819|SSF53098|TIGR01388 BD65_2010 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR036397 Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 BD65_2012 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE domain 2 GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|SSF116878|SSF52540|TIGR00231|TIGR00450 BD65_2013 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001708|IPR019998|IPR028053|IPR028055|IPR038210|IPR038221 Membrane insertase YidC/ALB3/OXA1/COX18|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC, periplasmic domain|Membrane insertase YidC/Oxa1, C-terminal|YidC, periplasmic domain superfamily GO:0016021|GO:0032977 G3DSA:2.70.98.90|MF_01810|PF02096|PF14849|PR00701|PR01900|TIGR03592|TIGR03593 BD65_2014 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002696 Putative membrane protein insertion efficiency factor MF_00386|PD004225|PF01809|SM01234|TIGR00278 BD65_2015 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000100|IPR014721|IPR020539|IPR020568 Ribonuclease P|Ribonuclease P, conserved site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PD003629|PF00825|PS00648|SSF54211|TIGR00188 BD65_2016 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|TIGR01030 BD65_2017 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633|IPR027417|IPR038454 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|DnaA, N-terminal domain superfamily|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.30.300.180|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PF11638|PR00051|PS01008|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 BD65_2018 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta sliding clamp|DNA polymerase III, beta sliding clamp, C-terminal|DNA polymerase III, beta sliding clamp, N-terminal|DNA polymerase III, beta sliding clamp, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|SM00480|SSF55979|TIGR00663 BD65_2019 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001238|IPR003395|IPR018078|IPR027417 DNA-binding, RecF|DNA-binding, RecF, conserved site|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0003697|GO:0005524|GO:0006281 G3DSA:1.20.1050.90|G3DSA:3.40.50.300|MF_00365|PF02463|PS00617|PS00618|SSF52540|TIGR00611 BD65_202 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005527|IPR036707 Cell division topological specificity factor MinE|Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 G3DSA:3.30.1070.10|MF_00262|PF03776|SSF55229|TIGR01215 BD65_2020 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568|IPR036890 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, C-terminal|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|TOPRIM domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.10.20.690|G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 BD65_2021 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000150|IPR006379|IPR023214|IPR036412 Cof family|HAD superfamily|HAD-like superfamily|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PS01228|PS01229|SSF56784|TIGR00099|TIGR01484 BD65_2022 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002469|IPR011042|IPR022223 Dipeptidylpeptidase IV, N-terminal domain|Protein of unknown function DUF3748|Six-bladed beta-propeller, TolB-like GO:0006508 G3DSA:2.120.10.30|PF00930|PF12566|SSF82171 BD65_2023 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010780 Protein of unknown function DUF1375 PF07119 BD65_2024 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002068|IPR008978|IPR023728 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein IbpA G3DSA:2.60.40.790|MF_02000|PF00011|SSF49764 BD65_2025 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002068|IPR008978|IPR022848 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein IbpB G3DSA:2.60.40.790|MF_02001|PF00011|SSF49764 BD65_2026 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006037|IPR006512|IPR023018|IPR036721 Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, C-terminal domain superfamily|Transport protein YidE, putative|YidE/YbjL duplication GO:0006813|GO:0008324 G3DSA:3.30.70.1450|MF_01016|PF02080|PF06826|SSF116726|TIGR01625 BD65_2027 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004839|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|PF00155|SSF53383 BD65_2028 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006664|IPR006665|IPR036737|IPR039567 Glycine zipper domain|OmpA-like domain|OmpA-like domain superfamily|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PF13488|PR01021|PR01023|SSF103088 BD65_203 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002586|IPR010223|IPR025501|IPR027417 ATP binding protein MinD|ATP binding protein MinD, bacterial-type|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0016887 G3DSA:3.40.50.300|PF01656|PIRSF003092|SSF52540|TIGR01968 BD65_2030 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011024 Gamma-crystallin-like G3DSA:2.60.20.10|SSF49695 BD65_2031 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF13673|SSF55729 BD65_2032 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004597|IPR005019|IPR011257 DNA glycosylase|DNA-3-methyladenine glycosylase I|Methyladenine glycosylase GO:0003824|GO:0006281|GO:0006284|GO:0008725 G3DSA:1.10.340.30|PF03352|SSF48150|TIGR00624 BD65_2034 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|SSF55681|TIGR00388 BD65_2035 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008909|IPR015944 DALR anticodon binding|Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004814|GO:0004820|GO:0005524|GO:0005737|GO:0006420|GO:0006426 MF_00255|PF02092|PF05746|PR01045|SSF109604|TIGR00211 BD65_2036 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021413 Protein of unknown function DUF3053 PF11254 BD65_2037 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007893 Spore coat protein U PF05229 BD65_2038 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000015|IPR025949 Outer membrane usher protein|PapC-like, C-terminal domain GO:0009297|GO:0015473|GO:0016020 G3DSA:2.60.40.2070|G3DSA:2.60.40.2610|G3DSA:2.60.40.3110|PF00577|PF13953 BD65_2039 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008962|IPR013783|IPR016147 Immunoglobulin-like fold|PapD-like superfamily|Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 G3DSA:2.60.40.10|PF00345|SSF49354 BD65_204 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005526|IPR007874|IPR013033|IPR016098|IPR036145|IPR038061 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal|MinC, Proteobacteria, N-terminal domain superfamily|Septum formation inhibitor MinC|Septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC, C-terminal domain superfamily|Septum formation inhibitor MinC, N-terminal GO:0000902|GO:0051302|GO:0051726|GO:1901891 G3DSA:2.160.20.70|G3DSA:3.30.750.120|MF_00267|PF03775|PF05209|SSF63848|TIGR01222 BD65_2040 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007893 Spore coat protein U PF05229|SM00972 BD65_2041 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007893 Spore coat protein U PF05229 BD65_2042 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002178|IPR003352|IPR003501|IPR004718|IPR016152|IPR036095 PTS EIIA type-2 domain|PTS system IIB component-like superfamily|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, EIIC|Phosphotransferase system, mannitol-specific enzyme IIC|Phosphotransferase/anion transporter GO:0008982|GO:0009401|GO:0016020|GO:0016021 G3DSA:3.40.50.2300|G3DSA:3.40.930.10|PF00359|PF02302|PF02378|PS00372|SSF52794|SSF55804|TIGR00851 BD65_2043 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000669|IPR008927|IPR013118|IPR013131|IPR013328|IPR023027|IPR023028|IPR036291 6-phosphogluconate dehydrogenase, domain 2|6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|Mannitol dehydrogenase|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|Mannitol dehydrogenase, conserved site|Mannitol-1-phosphate 5-dehydrogenase|NAD(P)-binding domain superfamily GO:0003824|GO:0008926|GO:0016491|GO:0019594|GO:0050662|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00196|PF01232|PF08125|PR00084|PS00974|SSF48179|SSF51735 BD65_2044 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007761|IPR038026 Mannitol repressor MtlR-like|MtlR-like superfamily G3DSA:1.20.120.330|PF05068|SSF158668 BD65_2045 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021230 Protein of unknown function DUF2810 G3DSA:3.30.1370.150|G3DSA:4.10.860.10|PF10928 BD65_2046 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005163|IPR005302|IPR011037 3-alpha domain|Molybdenum cofactor sulfurase, C-terminal|Pyruvate kinase-like, insert domain superfamily GO:0003824|GO:0030151|GO:0030170 G3DSA:2.40.33.20|PF03473|PF03475|SSF50800 BD65_2047 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003660|IPR004089|IPR004090|IPR032255 Chemotaxis methyl-accepting receptor|HAMP domain|Helical bimodular sensor domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:1.20.1440.210|PF00015|PF00672|PF16591|PR00260|SM00283|SM00304|SM01358|SSF58104 BD65_2048 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001189|IPR019831|IPR019832|IPR019833|IPR036314|IPR036324 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, C-terminal domain superfamily|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, N-terminal domain superfamily|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|G3DSA:2.40.500.20|PF00081|PF02777|PIRSF000349|PR01703|PS00088|SSF46609|SSF54719 BD65_2049 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003786|IPR016193 Cytidine deaminase-like|Sulfur carrier protein FdhD GO:0003824|GO:0016783 G3DSA:3.10.20.10|G3DSA:3.40.140.10|MF_00187|PF02634|PIRSF015626|SSF53927|TIGR00129 BD65_205 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR027354|IPR038068 YcgL domain|YcgL-like superfamily G3DSA:3.10.510.20|MF_01866|PD030374|PF05166|SSF160191 BD65_2050 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006656|IPR006963|IPR027467 Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0016491|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:3.40.50.740|PF00384|PF04879|PS00551|SM00926|SSF53706 BD65_2051 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006443|IPR006655|IPR006656|IPR006657|IPR009010 Aspartate decarboxylase-like domain superfamily|Formate dehydrogenase-N, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0008863|GO:0009055|GO:0016491|GO:0043546|GO:0045333|GO:0047111|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PS00932|SSF50692|SSF53706|TIGR01553 BD65_2052 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006470|IPR014603|IPR015246|IPR017896|IPR017900|IPR038384 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Formate dehydrogenase iron-sulphur subunit|Formate dehydrogenase iron-sulphur subunit, Proteobacteria|Formate dehydrogenase, C-terminal domain superfamily|Formate dehydrogenase, transmembrane GO:0015944|GO:0016021|GO:0045333|GO:0051539 G3DSA:1.20.5.480|G3DSA:3.30.70.20|PF09163|PF13247|PIRSF036298|PS00198|SSF54862|TIGR01582 BD65_2053 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006471|IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane|Formate dehydrogenase, gamma subunit GO:0008863|GO:0009055|GO:0009326|GO:0016020|GO:0016021|GO:0022904|GO:0045333 G3DSA:1.20.950.20|PF01292|SSF81342|TIGR01583 BD65_2054 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006452|IPR024064 FdhE-like superfamily|Formate dehydrogenase accessory protein GO:0005737 G3DSA:3.90.1670.10|MF_00611|PF04216|PIRSF018296|SSF144020|TIGR01562 BD65_2055 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004534|IPR015421|IPR015424|IPR018319|IPR025862 L-seryl-tRNA selenium transferase N-terminal domain|L-seryl-tRNA selenium transferase-like|L-seryl-tRNA(Sec) selenium transferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major domain GO:0001514|GO:0003824|GO:0004125|GO:0005737 G3DSA:3.40.640.10|G3DSA:3.90.1150.110|MF_00423|PF03841|PF12390|SSF53383|TIGR00474 BD65_2056 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000795|IPR004535|IPR009000|IPR009001|IPR015190|IPR015191|IPR027417|IPR031157|IPR036388|IPR036390 P-loop containing nucleoside triphosphate hydrolase|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor SelB, winged helix, type 2|Translation elongation factor SelB, winged helix, type 3|Translation elongation factor, selenocysteine-specific|Translation protein, beta-barrel domain superfamily|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0001514|GO:0003723|GO:0003746|GO:0003924|GO:0005525|GO:0005737 G3DSA:1.10.10.10|G3DSA:2.40.30.10|G3DSA:3.40.50.300|PF00009|PF09106|PF09107|PR00315|PS00301|SSF46785|SSF50447|SSF50465|SSF52540|TIGR00475 BD65_2057 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000755|IPR009045 D-alanyl-D-alanine dipeptidase|Hedgehog signalling/DD-peptidase zinc-binding domain superfamily GO:0005618|GO:0006508|GO:0008237|GO:0016805 G3DSA:3.30.1380.10|MF_01924|PF01427|PIRSF026671|SSF55166 BD65_2058 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1720.10|PF07690|SSF103473 BD65_2059 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002656|IPR032905 Acyltransferase 3|O-acetyltransferase WecH GO:0009246|GO:0016413|GO:0016747 MF_01949|PF01757 BD65_206 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011234|IPR036663 Fumarylacetoacetase-like, C-terminal|Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 G3DSA:3.90.850.10|PF01557|SSF56529 BD65_2061 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BD65_2062 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|SSF51126 BD65_2063 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023636|IPR023637|IPR035085|IPR035400|IPR035401|IPR036190|IPR038364 Urocanase|Urocanase conserved site|Urocanase superfamily|Urocanase, C-terminal domain|Urocanase, N-terminal domain|Urocanase, Rossmann-like domain|Urocanase, central domain superfamily GO:0016153 G3DSA:3.40.1770.10|G3DSA:3.40.50.10730|MF_00577|PF01175|PF17391|PF17392|PIRSF001423|PS01233|SSF111326|TIGR01228 BD65_2064 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001106|IPR005921|IPR008948|IPR022313|IPR024083 Aromatic amino acid lyase|Fumarase/histidase, N-terminal|Histidine ammonia-lyase|L-Aspartase-like|Phenylalanine/histidine ammonia-lyases, active site GO:0003824|GO:0004397|GO:0005737|GO:0006548|GO:0016841 G3DSA:1.10.275.10|G3DSA:1.20.200.10|MF_00229|PF00221|PS00488|SSF48557|TIGR01225 BD65_2065 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0006865|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF00324|PIRSF006060|PS00218 BD65_2066 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010406 Protein of unknown function DUF1003 PF06210 BD65_2067 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|SSF53474 BD65_2069 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000917|IPR012549|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain superfamily|Phosphoethanolamine transferase, N-terminal|Sulfatase, N-terminal GO:0003824|GO:0008484|GO:0016021 G3DSA:3.40.720.10|PF00884|PF08019|SSF53649 BD65_207 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BD65_2070 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR001789|IPR011006|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal GO:0000160|GO:0003677|GO:0006355 G3DSA:3.40.50.12740|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BD65_2071 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR007895|IPR011712|IPR036890 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|MASE1|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF02518|PF05231|PF07730|SM00387|SSF55874 BD65_2072 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000849|IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily|Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF07690|PIRSF002808|SSF103473|TIGR00881 BD65_2074 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|SSF53850 BD65_2075 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 PF00528|SSF161098 BD65_2076 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR025966|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Oligopeptide transport permease C-like, N-terminal domain GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BD65_2077 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BD65_2078 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BD65_2079 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017744 Cellulose biosynthesis protein BcsG PF11658|TIGR03368 BD65_208 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005358|IPR008228 Putative zinc- or iron-chelating domain containing protein|Uncharacterised conserved protein UCP006173 MF_00676|PF03692|PIRSF006173 BD65_2080 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019995 Cellulose biosynthesis, BcsF/YhjT PD053231|PF11120|TIGR03493 BD65_2081 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017745 BcsE, GIL domain GO:0035438 PF10995|TIGR03369 BD65_2082 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR024487 Protein YhjR PD053230|PF10945 BD65_2083 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017746|IPR027417 Cellulose synthase operon protein BcsQ|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF06564|SSF52540|TIGR03371 BD65_2084 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001173|IPR003919|IPR005150|IPR009875|IPR029044 Cellulose synthase|Cellulose synthase, subunit A|Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases|PilZ domain GO:0006011|GO:0016020|GO:0016759|GO:0016760|GO:0030244|GO:0035438 G3DSA:2.40.10.220|G3DSA:3.90.550.10|PF00535|PF03552|PF07238|PR01439|SSF141371|SSF53448|TIGR03030 BD65_2085 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003920|IPR008979|IPR018513 Cellulose synthase BcsB, bacterial|Cellulose synthase, subunit B|Galactose-binding-like domain superfamily GO:0006011|GO:0016020 G3DSA:2.60.120.260|PF03170|PR01440 BD65_2086 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002037|IPR008928|IPR012341 Glycoside hydrolase, family 8|Six-hairpin glycosidase superfamily|Six-hairpin glycosidase-like superfamily GO:0003824|GO:0004553|GO:0005975 G3DSA:1.50.10.10|PF01270|PR00735|SSF48208 BD65_2087 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008410|IPR011990|IPR019734 Cellulose synthase operon C, C-terminal|Tetratricopeptide repeat|Tetratricopeptide-like helical domain superfamily GO:0005515|GO:0019867|GO:0030244 G3DSA:1.25.40.10|PF05420|PF13176|PF13432|PF14559|SM00028|SSF48452 BD65_2088 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000160|IPR001633|IPR003660|IPR029787|IPR033419|IPR035919 EAL domain|EAL domain superfamily|GGDEF domain|Gammaproteobacterial periplasmic sensor domain GAPES3|HAMP domain|Nucleotide cyclase GO:0007165|GO:0016021 G3DSA:1.20.1480.50|G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00672|PF00990|PF17154|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 BD65_2089 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001991|IPR018107|IPR023954|IPR036458 C4-dicarboxylate transport protein|Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter superfamily|Sodium:dicarboxylate symporter, conserved site GO:0006835|GO:0015293|GO:0016021 G3DSA:1.10.3860.10|MF_01300|PF00375|PR00173|PS00713|PS00714|SSF118215 BD65_2090 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007863|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|SSF63411 BD65_2091 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00584|SSF53613 BD65_2092 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004370|IPR014347|IPR018191 4-oxalocrotonate tautomerase|4-oxalocrotonate tautomerase, Pseudomonas-type|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.10|PF01361|SSF55331|TIGR00013 BD65_2093 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001633|IPR035919 EAL domain|EAL domain superfamily G3DSA:3.20.20.450|PF00563|SM00052|SSF141868 BD65_2094 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003763|IPR036265|IPR038433 CDP-diacylglycerol pyrophosphatase|CDP-diacylglycerol pyrophosphatase superfamily|HIT-like superfamily GO:0008654|GO:0008715|GO:0016020 G3DSA:3.30.428.30|PF02611|PIRSF001273|SSF54197 BD65_2095 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005274|IPR017039 Inner membrane protein YhjD|Virulence factor BrkB PF03631|PIRSF035875|TIGR00766 BD65_2096 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BD65_2097 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001991|IPR036458 Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|SSF118215 BD65_2098 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000277|IPR006233|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Cystathionine beta-lyase, bacterial|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0004121|GO:0005737|GO:0006520|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01324 BD65_2099 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001100|IPR004099|IPR006322|IPR012999|IPR016156|IPR023753|IPR036188 FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|FAD/NAD-linked reductase, dimerisation domain superfamily|Glutathione reductase, eukaryote/bacterial|Pyridine nucleotide-disulphide oxidoreductase, class I|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004362|GO:0006749|GO:0009055|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0050661|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|SSF51905|SSF55424|TIGR01421 BD65_21 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018635 Uncharacterised protein family UPF0319 MF_00789|PF09829 BD65_210 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003752|IPR022920|IPR023380 Disulphide bond formation protein DsbB|Disulphide bond formation protein DsbB/BdbC|DsbB-like superfamily GO:0015035|GO:0016020 G3DSA:1.20.1550.10|MF_00286|PF02600|SSF158442 BD65_2100 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002052|IPR007473|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Ribosomal RNA large subunit methyltransferase J|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0008649|GO:0032259|GO:0070475 G3DSA:3.40.50.150|MF_00934|PF04378|PS00092|SSF53335 BD65_2101 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001567|IPR024077 Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 G3DSA:1.10.1370.10|G3DSA:1.10.1370.40|PF01432|SSF55486 BD65_2102 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007536|IPR029063 Ribosomal RNA small subunit methyltransferase J|S-adenosyl-L-methionine-dependent methyltransferase GO:0008990|GO:0031167 G3DSA:3.40.1630.10|G3DSA:3.40.50.150|MF_01523|PF04445|SSF53335 BD65_2103 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR033524|IPR036291 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|Leu/Phe/Val dehydrogenases active site|NAD(P)-binding domain superfamily GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:1.10.285.10|G3DSA:3.40.50.10860|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|SM00839|SSF51735|SSF53223 BD65_2104 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA G3DSA:3.40.50.620|PF00582|PIRSF006276|SSF52402 BD65_2105 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019598 Universal stress protein B MF_01088|PF10625 BD65_2106 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384 BD65_2107 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004792|IPR023166|IPR036188 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|FAD/NAD(P)-binding domain superfamily|HI0933-like insert domain superfamily G3DSA:1.10.8.260|G3DSA:2.40.30.10|G3DSA:3.50.50.60|PF03486|PR00368|PR00411|SSF160996|SSF51905|TIGR00275 BD65_2108 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PF01810|PIRSF006324 BD65_2109 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF00583|SSF55729 BD65_211 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 MF_01599|PF06450|TIGR00774 BD65_2110 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003829|IPR011051|IPR012093|IPR014710 Pirin|Pirin, N-terminal domain|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PIRSF006232|SSF51182 BD65_2111 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000843|IPR001761|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain superfamily|Periplasmic binding protein-like I|Periplasmic binding protein/LacI sugar binding domain GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF00532|PS00356|SM00354|SSF47413|SSF53822 BD65_2112 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PF02447|PIRSF002746|TIGR00791 BD65_2113 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006001|IPR027417|IPR031322 Carbohydrate kinase, thermoresistant glucokinase|P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/gluconokinase GO:0005975|GO:0016301 G3DSA:3.40.50.300|PF01202|PR01100|SSF52540|TIGR01313 BD65_2114 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|TIGR00427 BD65_2115 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000319|IPR000534|IPR011534|IPR012080|IPR012280|IPR036291 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, conserved site|Aspartate-semialdehyde dehydrogenase, gamma-type|NAD(P)-binding domain superfamily|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0004073|GO:0005737|GO:0006520|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|PS01103|SM00859|SSF51735|SSF55347|TIGR01745 BD65_2116 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010559|IPR011620|IPR036890 Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region|Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 G3DSA:3.30.565.10|PF06580|PF07694|SSF55781|SSF55874 BD65_2117 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004193|IPR006047|IPR006048|IPR006407|IPR013780|IPR013783|IPR014756|IPR017853|IPR037439 1,4-alpha-glucan-branching enzyme|1,4-alpha-glucan-branching enzyme, GlgB|Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_00685|PF00128|PF02806|PF02922|PIRSF000463|SM00642|SSF51011|SSF51445|SSF81296|TIGR01515 BD65_2118 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004193|IPR006047|IPR011837|IPR013780|IPR013783|IPR014756|IPR017853|IPR022844 Glycogen debranching enzyme, GlgX type|Glycogen debranching enzyme, bacterial|Glycoside hydrolase superfamily|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0004133|GO:0004553|GO:0005975|GO:0005977|GO:0005980 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_01248|PF00128|PF02922|SM00642|SSF51011|SSF51445|SSF81296|TIGR02100 BD65_2119 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005835|IPR005836|IPR011004|IPR011831|IPR023049|IPR029044 ADP-glucose pyrophosphorylase, conserved site|Glucose-1-phosphate adenylyltransferase|Glucose-1-phosphate adenylyltransferase GlgC, bacterial|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|Trimeric LpxA-like superfamily GO:0005978|GO:0008878|GO:0009058|GO:0016779 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_00624|PF00483|PS00808|PS00809|PS00810|SSF51161|SSF53448|TIGR02091 BD65_212 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000524|IPR008920|IPR014178|IPR028374|IPR036388|IPR036390 FadR, C-terminal domain|Fatty acid response transcription factor FadR|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0000062|GO:0003677|GO:0003700|GO:0006355|GO:0019217 G3DSA:1.10.10.10|G3DSA:1.20.120.530|MF_00696|PF00392|PF07840|PR00035|SM00345|SSF46785|SSF48008|TIGR02812 BD65_2120 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001296|IPR011835|IPR013534 Bacterial/plant glycogen synthase|Glycosyl transferase, family 1|Starch synthase, catalytic domain GO:0004373 G3DSA:3.40.50.2000|MF_00484|PF00534|PF08323|SSF53756|TIGR02095 BD65_2121 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000811|IPR011833|IPR035090 Glycogen/starch/alpha-glucan phosphorylase|Glycosyl transferase, family 35|Phosphorylase pyridoxal-phosphate attachment site GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PIRSF000460|PS00102|SSF53756|TIGR02093 BD65_2122 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000447|IPR006076|IPR031656|IPR036188|IPR038299 Alpha-glycerophosphate oxidase, C-terminal|Alpha-glycerophosphate oxidase, C-terminal domain superfamily|FAD dependent oxidoreductase|FAD-dependent glycerol-3-phosphate dehydrogenase|FAD/NAD(P)-binding domain superfamily GO:0004368|GO:0006072|GO:0009331|GO:0016491|GO:0055114 G3DSA:1.10.8.870|G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PF16901|PR01001|PS00977|PS00978|SSF51905|SSF54373 BD65_2123 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001034|IPR014036|IPR018356|IPR036388|IPR036390|IPR037171 DeoR C-terminal sensor domain|DeoR-type HTH domain|NagB/RpiA transferase-like|Transcription regulator, HTH DeoR-type, conserved site|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.750.70|PF00455|PF08220|PR00037|PS00894|SM00420|SM01134|SSF100950|SSF46785 BD65_2124 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022732|IPR022764|IPR023662|IPR035952|IPR038236 GlpG peptidase, N-terminal domain superfamily|Peptidase S54, GlpG peptidase, N-terminal|Peptidase S54, rhomboid domain|Rhomboid protease GlpG|Rhomboid-like superfamily GO:0004252|GO:0006508|GO:0016021 G3DSA:1.20.1540.10|G3DSA:3.30.70.2350|MF_01594|PF01694|PF12122|SSF144091|TIGR04239 BD65_2125 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001763|IPR023695|IPR036873 Rhodanese-like domain|Rhodanese-like domain superfamily|Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 G3DSA:3.40.250.10|MF_01009|PF00581|SM00450|SSF52821 BD65_2126 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR011990|IPR016032|IPR023768|IPR027417|IPR036388 P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain superfamily|Transcription regulator LuxR, C-terminal|Transcriptional regulator HTH-type, MalT|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|MF_01247|PF00196|PR00038|PS00622|SM00421|SSF46894|SSF48452|SSF52540 BD65_2127 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000811|IPR011833|IPR035090 Glycogen/starch/alpha-glucan phosphorylase|Glycosyl transferase, family 35|Phosphorylase pyridoxal-phosphate attachment site GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PIRSF000460|PS00102|SSF53756|TIGR02093 BD65_2128 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003385|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, family 77 GO:0004134|GO:0005975 G3DSA:3.20.20.80|PF02446|SSF51445|TIGR00217 BD65_2129 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000361|IPR001075|IPR017726|IPR034904|IPR035903 Fe-S cluster assembly domain superfamily|Fe/S biogenesis protein NfuA|FeS cluster biogenesis|HesB-like domain superfamily|NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536|GO:0051539|GO:0051604 G3DSA:2.60.300.12|G3DSA:3.30.300.130|MF_01637|PD002830|PF01106|PF01521|SSF117916|SSF89360|TIGR03341 BD65_213 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007390 Sporulation stage V, protein R PF04293 BD65_2130 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271 BD65_2131 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000073|IPR010076|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 G3DSA:3.40.50.1820|MF_01260|PF00561|SSF53474|TIGR01738 BD65_2132 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010854|IPR025543|IPR036275 Dodecin-like|Domain of unknown function DUF1471|YdgH-like superfamily G3DSA:3.30.1660.10|PF07338|SSF159871 BD65_2133 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR015102|IPR023732|IPR036388|IPR036390 Probable [Fe-S]-dependent transcriptional repressor|Transcriptional regulator HTH-type, FeoC|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily G3DSA:1.10.10.10|MF_01586|PF09012|SSF46785 BD65_2134 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003373|IPR005225|IPR011640|IPR011642|IPR027417|IPR030389 FeoB-type guanine nucleotide-binding (G) domain|Ferrous iron transport protein B|Ferrous iron transport protein B, C-terminal|Nucleoside transporter/FeoB GTPase, Gate domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525|GO:0015093|GO:0015684|GO:0016021 G3DSA:3.40.50.300|PF02421|PF07664|PF07670|SSF52540|TIGR00231|TIGR00437 BD65_2135 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007167|IPR008988|IPR038157 Ferrous iron transporter FeoA domain|Ferrous iron transporter, core domain|Transcriptional repressor, C-terminal GO:0046914 G3DSA:2.30.30.90|PF04023|SM00899|SSF50037 BD65_2136 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003029|IPR006641|IPR010994|IPR012337|IPR012340|IPR018974|IPR022967|IPR023319|IPR023323|IPR032639|IPR037027 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease H-like superfamily|RuvA domain 2-like|S1 domain|Tex protein, YqgF-like domain|Tex-like domain superfamily|Tex-like protein, HTH domain superfamily|Tex-like protein, N-terminal|YqgF/RNase H-like domain|YqgF/RNase H-like domain superfamily GO:0003676|GO:0006139 G3DSA:1.10.10.650|G3DSA:1.10.150.310|G3DSA:1.10.3500.10|G3DSA:2.40.50.140|G3DSA:3.30.420.140|PF00575|PF09371|PF12836|PF16921|SM00316|SM00732|SSF158832|SSF47781|SSF50249|SSF53098 BD65_2137 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BD65_2138 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016084 Haem oxygenase-like, multi-helical G3DSA:1.20.910.10 BD65_214 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006076|IPR023080|IPR036188 D-amino acid dehydrogenase DadA|FAD dependent oxidoreductase|FAD/NAD(P)-binding domain superfamily GO:0008718|GO:0016491|GO:0019478|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|MF_01202|PF01266|SSF51905|SSF54373 BD65_2140 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016084 Haem oxygenase-like, multi-helical G3DSA:1.20.910.10|SSF48613 BD65_2142 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001437|IPR006358|IPR018151|IPR022691|IPR023459|IPR028624|IPR036805|IPR036953 Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor GreA/GreB, C-terminal domain superfamily|Transcription elongation factor GreB|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, N-terminal domain superfamily|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|MF_00930|PF01272|PF03449|PIRSF006092|PS00829|PS00830|SSF46557|SSF54534|TIGR01461 BD65_2143 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001867|IPR011006|IPR016032|IPR036388 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BD65_2144 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR036097|IPR036890 HAMP domain|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 BD65_2145 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001272|IPR008210|IPR013035|IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site|Phosphoenolpyruvate carboxykinase, ATP-utilising|Phosphoenolpyruvate carboxykinase, C-terminal|Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0004612|GO:0005524|GO:0006094|GO:0017076 G3DSA:2.170.8.10|G3DSA:3.40.449.10|G3DSA:3.90.228.20|MF_00453|PF01293|PIRSF006294|PS00532|SSF53795|SSF68923|TIGR00224 BD65_2146 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000397|IPR016153|IPR016154|IPR023212 Heat shock protein Hsp33|Heat shock protein Hsp33, C-terminal|Heat shock protein Hsp33, N-terminal|Heat shock protein Hsp33, helix hairpin bin domain superfamily GO:0005737|GO:0006457|GO:0051082 G3DSA:1.10.287.480|G3DSA:3.55.30.10|G3DSA:3.90.1280.10|MF_00117|PF01430|PIRSF005261|SSF118352|SSF64397 BD65_2147 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002942|IPR025708|IPR036986 Heat shock protein 15|RNA-binding S4 domain|RNA-binding S4 domain superfamily GO:0003677|GO:0003723|GO:0003727|GO:0034605|GO:0043023 G3DSA:3.10.290.10|PF01479|PIRSF016821|SM00363|SSF55174 BD65_2148 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006439|IPR023214|IPR036412 HAD hydrolase, subfamily IA|HAD superfamily|HAD-like superfamily GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01509 BD65_2149 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 PD147088|PF07095 BD65_215 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|SM01005|SSF50621|SSF51419|TIGR00492 BD65_2150 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|SSF55811 BD65_2151 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001264|IPR001460|IPR012338|IPR023346|IPR031376|IPR036950 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain superfamily|Penicillin binding protein transglycosylase domain|Penicillin-binding protein, OB-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PF17092|SSF53955|SSF56601|TIGR02074 BD65_2152 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005883 Type IV pilus assembly protein PilM G3DSA:3.30.1490.300|G3DSA:3.30.420.40|PF11104 BD65_2156 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001775|IPR004845|IPR004846|IPR005644|IPR011662|IPR013355|IPR038591 GspD/PilQ family|NolW-like|NolW-like superfamily|Secretin/TonB, short N-terminal domain|Type II secretion system GspD, conserved site|Type II/III secretion system|Type IV pilus secretin PilQ GO:0008565|GO:0009306|GO:0019867 G3DSA:3.30.1370.120|G3DSA:3.55.50.30|PF00263|PF03958|PR00811|PR01032|PS00875|SM00965|TIGR02515 BD65_2157 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000623|IPR023000|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase, conserved site|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|PS01128|SSF52540 BD65_2158 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|SSF56796|TIGR01357 BD65_2159 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007730|IPR032899|IPR036680 Cell division protein DamX|Sporulation-like domain|Sporulation-like domain superfamily GO:0030428|GO:0032506|GO:0042834 G3DSA:3.30.70.1070|MF_02021|PF05036|SSF110997 BD65_216 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001958|IPR004812|IPR005829|IPR011701|IPR036259 Drug resistance transporter Bcr/CmlA subfamily|MFS transporter superfamily|Major facilitator superfamily|Sugar transporter, conserved site|Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215|GO:0006855|GO:0015238|GO:0016021|GO:0055085 G3DSA:1.20.1720.10|PF07690|PR01035|PS00216|SSF103473|TIGR00710 BD65_2160 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002052|IPR012263|IPR012327|IPR023095|IPR029063 Adenine modification methylase, M.EcoRV-type|Adenine-specific methyltransferase, domain 2|D12 class N6 adenine-specific DNA methyltransferase|DNA methylase, N-6 adenine-specific, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0009007|GO:0032259|GO:0032775 G3DSA:1.10.1020.10|G3DSA:3.40.50.150|PF02086|PIRSF000398|PR00505|PS00092|SSF53335|TIGR00571 BD65_2161 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PS01086|SSF51366|TIGR01163 BD65_2162 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006346|IPR006439|IPR023198|IPR023214|IPR036412|IPR037512 2-phosphoglycolate phosphatase-like, prokaryotic|HAD hydrolase, subfamily IA|HAD superfamily|HAD-like superfamily|Phosphoglycolate phosphatase, prokaryotic|Phosphoglycolate phosphatase-like, domain 2 GO:0005975|GO:0008967|GO:0016787|GO:0016791 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|MF_00495|PF13419|PR00413|SSF56784|TIGR01449|TIGR01509|TIGR01549 BD65_2163 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001412|IPR002305|IPR002306|IPR014729|IPR024109 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase|Tryptophan-tRNA ligase, bacterial-type GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|MF_00140_B|PF00579|PR01039|PS00178|SSF52374|TIGR00233 BD65_2164 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000878|IPR003043|IPR006366|IPR006367|IPR012409|IPR014776|IPR014777|IPR019478|IPR028281|IPR035996|IPR036291|IPR037115 NAD(P)-binding domain superfamily|Sirohaem synthase|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Sirohaem synthase, dimerisation domain superfamily|Siroheme synthase, central domain|Tetrapyrrole methylase|Tetrapyrrole methylase superfamily|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004851|GO:0006779|GO:0008168|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|MF_01646|PF00590|PF10414|PF13241|PF14824|PIRSF036426|PS00839|PS00840|SSF51735|SSF53790|SSF75615|TIGR01469|TIGR01470 BD65_2165 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000292|IPR023271|IPR024002 Aquaporin-like|Formate/nitrite transporter|Formate/nitrite transporter, conserved site GO:0016020|GO:0022857|GO:0055085 G3DSA:1.20.1080.10|PF01226|PS01005|PS01006|TIGR00790 BD65_2166 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012748|IPR036922 Nitrite reductase [NAD(P)H] small subunit, NirD|Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0008942|GO:0016491|GO:0042128|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF13806|SSF50022|TIGR02378 BD65_2167 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005117|IPR006066|IPR006067|IPR007419|IPR012744|IPR017121|IPR023753|IPR036136|IPR036188 BFD-like [2Fe-2S]-binding domain|FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|Nitrite reductase [NAD(P)H] large subunit, NirB|Nitrite reductase [NAD(P)H], large subunit|Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/Sulfite reductase ferredoxin-like domain superfamily|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0008942|GO:0016491|GO:0020037|GO:0042128|GO:0050660|GO:0050661|GO:0051536|GO:0055114 G3DSA:1.10.10.1100|G3DSA:3.30.413.10|G3DSA:3.50.50.60|PF01077|PF03460|PF04324|PF07992|PIRSF037149|PR00368|PR00397|PR00411|PS00365|SSF51905|SSF55124|SSF56014|TIGR02374 BD65_2168 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain superfamily GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|SSF51338|SSF51556 BD65_2169 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR023528|IPR036259 MFS transporter superfamily|Major facilitator superfamily|Major facilitator superfamily transporter, TsgA GO:0016021|GO:0055085 G3DSA:1.20.1250.20|MF_01044|PF07690|SSF103473 BD65_2170 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021333 Protein of unknown function DUF2946 PF11162 BD65_2171 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000531|IPR010100|IPR012910|IPR036942|IPR037066 TonB-dependent copper receptor|TonB-dependent receptor, plug domain|TonB-dependent receptor, plug domain superfamily|TonB-dependent receptor-like, beta-barrel|TonB-dependent receptor-like, beta-barrel domain superfamily G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01778 BD65_2172 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain superfamily|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|SM00354|SSF47413|SSF53822 BD65_2173 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001088|IPR015955|IPR019802|IPR022616|IPR036291 Glycoside hydrolase, family 4|Glycoside hydrolase, family 4, conserved site|Glycosyl hydrolase, family 4, C-terminal|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|NAD(P)-binding domain superfamily GO:0003824|GO:0004553|GO:0005975|GO:0016616|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF02056|PF11975|PR00732|PS01324|SSF51735|SSF56327 BD65_2174 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain superfamily|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PS00170|SSF50891 BD65_2175 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|SSF52317|TIGR00566 BD65_2176 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424|IPR017652 Acetyl/Succinylornithine transaminase family, bacteria|Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0006520|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PIRSF000521|PS00600|SSF53383|TIGR00707|TIGR03246 BD65_2177 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010020|IPR032692 Integral membrane protein YccS, N-terminal|Integral membrane protein, YccS/YhfK PF12805|PF13515|TIGR01667 BD65_2178 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000595|IPR012318|IPR014710|IPR018335|IPR018488|IPR018490|IPR036388|IPR036390 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF00325|PR00034|PS00042|PS00888|PS00889|SM00100|SM00419|SSF46785|SSF51206 BD65_2179 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003718|IPR015946|IPR036102 K homology domain-like, alpha/beta|OsmC/Ohr family|OsmC/Ohr superfamily G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|SSF82784 BD65_218 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR003018|IPR012226|IPR013655|IPR029016|IPR029787|IPR035919|IPR035965 Diguanylate cyclase/phosphodiesterase|EAL domain|EAL domain superfamily|GAF domain|GAF-like domain superfamily|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS domain superfamily|PAS fold-3 GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00563|PF00990|PF08447|PF13185|PF13426|PIRSF005925|SM00052|SM00065|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55781|SSF55785|TIGR00229|TIGR00254 BD65_2180 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:3.30.470.20|PF13535|SSF56059 BD65_2181 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892 BD65_2182 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271 BD65_2183 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001926|IPR036052 Pyridoxal-phosphate dependent enzyme|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|SSF53686 BD65_2184 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006082|IPR006083|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase|Phosphoribulokinase/uridine kinase GO:0005524|GO:0005975|GO:0008974|GO:0016301 G3DSA:3.40.50.300|PF00485|PR00478|PS00567|SSF52540 BD65_2185 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010648|IPR036685 Uncharacterised protein family UPF0270|YehU-like superfamily G3DSA:1.10.10.610|MF_00690|PD026997|PF06794|PIRSF006169|SSF118001 BD65_2186 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000073|IPR000952|IPR012020|IPR029058 AB hydrolase 4 family|AB hydrolase 4, conserved site|Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PIRSF005211|PS01133|SSF53474 BD65_2187 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PF01810 BD65_2188 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756 BD65_2189 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BD65_219 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_2190 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540 BD65_2191 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003680|IPR023947|IPR029039 Flavodoxin-like fold|Flavoprotein-like superfamily|Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 G3DSA:3.40.50.360|MF_01415|PF02525|SSF52218 BD65_2192 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003148|IPR004771|IPR006153|IPR020884|IPR036291|IPR038770 Cation/H+ exchanger|Glutathione-regulated potassium-efflux system protein KefB|K+/H+ exchanger|NAD(P)-binding domain superfamily|Regulator of K+ conductance, N-terminal|Sodium/solute symporter superfamily GO:0005886|GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0015503|GO:0016021|GO:0055085 G3DSA:1.20.1530.20|G3DSA:3.40.50.720|MF_01412|PF00999|PF02254|SSF51735|TIGR00932 BD65_2193 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012658 Conserved hypothetical protein CHP02443 PF09526|TIGR02443 BD65_2194 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain G3DSA:2.40.10.330|G3DSA:3.10.50.40|PF00254|SSF54534 BD65_2195 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007236 SlyX MF_00715|PF04102 BD65_2196 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000774|IPR001179|IPR036944 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|SSF54534 BD65_2197 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013559|IPR039445 Transcriptional regulator DauR-like, HTH domain|YheO-like PD037769|PF08348|PF13309 BD65_2198 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003787|IPR017463|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein|Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 G3DSA:3.40.1260.10|MF_00390|PF02635|SSF75169|TIGR03012 BD65_2199 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003787|IPR017462|IPR027396|IPR037450 DsrEFH-like|Sulphur relay, DsrE/F-like protein|Sulphur relay, TusC|Sulphur relay, TusC/DsrF G3DSA:3.40.1260.10|MF_00389|PF02635|SSF75169|TIGR03010 BD65_22 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003781|IPR036291 CoA-binding|NAD(P)-binding domain superfamily GO:0048037 G3DSA:3.40.50.720|PF13380|SM00881|SSF51735 BD65_220 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 G3DSA:3.30.1330.80|PF03306|PIRSF001332|SSF117856|TIGR01252 BD65_2200 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007215|IPR023526|IPR027396 DsrEFH-like|Sulphur relay, TusB|Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 G3DSA:3.40.1260.10|MF_01564|PF04077|SSF75169|TIGR03011 BD65_2201 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacterial-type|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|SSF50249|TIGR00981 BD65_2202 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000235|IPR005717|IPR020606|IPR023798|IPR036823 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7 domain superfamily|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|SSF47973|TIGR01029 BD65_2203 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR014721|IPR020568|IPR027417|IPR031157|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain superfamily GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 BD65_2204 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu-like, domain 2|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation protein, beta-barrel domain superfamily GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 BD65_2205 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007419 BFD-like [2Fe-2S]-binding domain G3DSA:1.10.10.1100|PF04324 BD65_2206 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like|Ferritin-like superfamily|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PS00549|SSF47240|TIGR00754 BD65_2207 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001848|IPR018268|IPR027486|IPR036838 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10 domain superfamily|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|SM01403|SSF54999|TIGR01049 BD65_2208 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:2.40.50.620|MF_01325_B|PF00297|PS00474|SSF50447|TIGR03625 BD65_2209 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain superfamily|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|SSF52166|TIGR03953 BD65_221 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR012782|IPR029035|IPR029061 Acetolactate synthase, catabolic|DHS-like NAD/FAD-binding domain superfamily|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0030976|GO:0034077 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518|TIGR02418 BD65_2210 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001014|IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain superfamily|Ribosomal protein L23/L15e core domain superfamily|Ribosomal protein L23/L25, conserved site|Ribosomal protein L25/L23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|PS00050|SSF54189 BD65_2211 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 2|Ribosomal protein L2, domain 3|Translation protein SH3-like domain superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 BD65_2212 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|SSF54570|TIGR01050 BD65_2213 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001063|IPR005727|IPR018260|IPR036394 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17|Ribosomal protein L22/L17 superfamily|Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|PS00464|SSF54843|TIGR01044 BD65_2214 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280|IPR036419 K Homology domain|K Homology domain, type 2|K homology domain superfamily, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, C-terminal domain superfamily|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|SM00322|SSF54814|SSF54821|TIGR01009 BD65_2215 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000114|IPR016180|IPR020798|IPR036920 Ribosomal protein L10e/L16|Ribosomal protein L10e/L16 superfamily|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|PS00701|SSF54686|TIGR01164 BD65_2216 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001854|IPR036049 Ribosomal protein L29/L35|Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|SSF46561|TIGR00012 BD65_2217 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000266|IPR012340|IPR019979|IPR019984 30S ribosomal protein S17|Nucleic acid-binding, OB-fold|Ribosomal protein S17, conserved site|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|SSF50249|TIGR03635 BD65_2218 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000218|IPR005745|IPR019972|IPR036853 Ribosomal protein L14 superfamily|Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|SM01374|SSF50193|TIGR01067 BD65_2219 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003256|IPR005824|IPR005825|IPR008991|IPR014722 KOW|Ribosomal protein L2, domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF17136|PS01108|SM00739|SSF50104|TIGR01079 BD65_222 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006698 Uncharacterised protein family UPF0229 MF_01232|PF04285 BD65_2220 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002132|IPR020929|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain superfamily|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|SSF55282 BD65_2221 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001209|IPR018271|IPR023036 Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid|Ribosomal protein S14, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_00537|PF00253|PS00527|SSF57716 BD65_2222 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000630|IPR035987 Ribosomal protein S8|Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|SSF56047 BD65_2223 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000702|IPR002358|IPR019906|IPR020040|IPR036789 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, alpha-beta domain superfamily|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|SSF56053|TIGR03654 BD65_2224 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|SSF53137|TIGR00060 BD65_2225 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005324|IPR005712|IPR013810|IPR014721|IPR018192|IPR020568 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|SSF54211|SSF54768|TIGR01021 BD65_2226 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005996|IPR016082|IPR018038|IPR036919 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, conserved site|Ribosomal protein L30, ferredoxin-like fold domain|Ribosomal protein L30, ferredoxin-like fold domain superfamily GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|PS00634|SSF55129|TIGR01308 BD65_2227 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001196|IPR005749|IPR021131|IPR030878|IPR036227 Ribosomal L18e/L15P superfamily|Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L15, conserved site|Ribosomal protein L18e/L15P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PS00475|SSF52080|TIGR01071 BD65_2228 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY domain superfamily|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PS00756|SSF103491|TIGR00967 BD65_2229 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000473|IPR035977 Ribosomal protein L36|Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PD002101|PF00444|PS00828|SSF57840|TIGR01022 BD65_223 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010650|IPR013153|IPR016230|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PrkA AAA domain|PrkA C-terminal domain|Serine-protein kinase, PrkA GO:0004672 G3DSA:3.40.50.300|PF06798|PF08298|PIRSF000549|SM00763|SSF52540 BD65_2230 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001892|IPR010979|IPR018269|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|SSF46946|TIGR03631 BD65_2231 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001971|IPR018102|IPR019981|IPR036967 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11 superfamily|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|SSF53137|TIGR03632 BD65_2232 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001912|IPR002942|IPR005709|IPR018079|IPR036986 RNA-binding S4 domain|RNA-binding S4 domain superfamily|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|SM00363|SM01390|SSF55174|TIGR01017 BD65_2233 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011260|IPR011262|IPR011263|IPR011773|IPR036603|IPR036643 DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|DNA-directed RNA polymerase, insert domain superfamily|RNA polymerase, RBP11-like subunit|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 BD65_2234 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000456|IPR036373 Ribosomal protein L17|Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|SSF64263|TIGR00059 BD65_2235 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000551|IPR009061|IPR011788 MerR-type HTH domain|Putative DNA-binding domain superfamily|Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0006355|GO:0008270 G3DSA:1.10.1660.10|PF13411|PR00040|PS00552|SM00422|SSF46955|TIGR02043 BD65_2236 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005589 Alternative ribosome-rescue factor A GO:0072344 PF03889 BD65_2237 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001185|IPR019823|IPR036019|IPR037673 Gated mechanosensitive channel|Large-conductance mechanosensitive channel|Large-conductance mechanosensitive channel, conserved site|Large-conductance mechanosensitive channel/anditomin synthesis protein L GO:0008381|GO:0016021|GO:0034220 G3DSA:1.10.1200.120|MF_00115|PF01741|PR01264|PS01327|SSF81330|TIGR00220 BD65_2238 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003148|IPR006036|IPR006037|IPR036291|IPR036721 NAD(P)-binding domain superfamily|Potassium uptake protein TrkA|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, C-terminal domain superfamily|Regulator of K+ conductance, N-terminal GO:0005886|GO:0006813|GO:0008324|GO:0015079 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF02080|PF02254|PR00335|SSF116726|SSF51735 BD65_2239 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001678|IPR004573|IPR006027|IPR018314|IPR023267|IPR023541|IPR029063|IPR035926 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site|NusB-like superfamily|NusB/RsmB/TIM44|RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type|rRNA small subunit methyltransferase B|rRNA small subunit methyltransferase B, enterobacteriaceae GO:0003723|GO:0006355|GO:0006364|GO:0008168|GO:0008649 G3DSA:1.10.287.730|G3DSA:1.10.940.10|G3DSA:3.30.70.1170|G3DSA:3.40.50.150|MF_01856|PF01029|PF01189|PR02008|PS01153|SSF48013|SSF53335|TIGR00563 BD65_224 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010583 MltA-interacting MipA PF06629 BD65_2240 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001555|IPR002376|IPR005793|IPR005794|IPR011034|IPR036477|IPR037022 Formyl transferase, C-terminal|Formyl transferase, C-terminal domain superfamily|Formyl transferase, N-terminal|Formyl transferase, N-terminal domain superfamily|Formyl transferase-like, C-terminal domain superfamily|Methionyl-tRNA formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|PS00373|SSF50486|SSF53328|TIGR00460 BD65_2241 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023635|IPR036821 Peptide deformylase|Peptide deformylase superfamily G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|SSF56420|TIGR00079 BD65_2242 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003488 DNA recombination-mediator protein A GO:0009294 G3DSA:3.40.50.450|PF02481|SSF102405|TIGR00732 BD65_2243 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007456 Smg MF_00598|PF04361 BD65_2244 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 G3DSA:3.30.65.10|PF01396|SSF57783 BD65_2245 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006070|IPR017945|IPR023535 DHBP synthase RibB-like alpha/beta domain superfamily|Threonylcarbamoyl-AMP synthase|YrdC-like domain GO:0002949|GO:0003725|GO:0005524 G3DSA:3.90.870.10|MF_01852|PF01300|SSF55821 BD65_2246 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006151|IPR011342|IPR013708|IPR022893|IPR036291 NAD(P)-binding domain superfamily|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Shikimate dehydrogenase|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0019632|GO:0050661|GO:0055114 G3DSA:3.40.50.10860|G3DSA:3.40.50.720|MF_00222|PF01488|PF08501|SSF51735|SSF53223|TIGR00507 BD65_2247 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like superfamily G3DSA:2.160.10.10|PF00132|SSF51161 BD65_225 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain superfamily|Sulfatase, N-terminal GO:0003824|GO:0008484 G3DSA:3.40.720.10|PF00884|SSF53649 BD65_2252 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001734|IPR014083|IPR018212|IPR038377 Cation/acetate symporter ActP|Sodium/glucose symporter superfamily|Sodium/solute symporter|Sodium/solute symporter, conserved site GO:0005887|GO:0015123|GO:0016020|GO:0022857|GO:0043879|GO:0055085 G3DSA:1.20.1730.10|MF_01426|PF00474|PS00456|PS00457|TIGR00813|TIGR02711 BD65_2253 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007436 Protein of unknown function DUF485 PF04341 BD65_2254 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000873|IPR011904|IPR020845|IPR025110|IPR032387 AMP-binding enzyme, C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetate-CoA ligase|Acetyl-coenzyme A synthetase, N-terminal domain GO:0003824|GO:0003987|GO:0016208|GO:0019427 G3DSA:3.30.300.30|G3DSA:3.40.50.12780|MF_01123|PF00501|PF13193|PF16177|PS00455|SSF56801|TIGR02188 BD65_2255 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001991|IPR018107|IPR034703|IPR036458 Proton/glutamate-aspartate symporter GltP|Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter superfamily|Sodium:dicarboxylate symporter, conserved site GO:0006835|GO:0015293|GO:0016021 G3DSA:1.10.3860.10|MF_02063|PF00375|PR00173|PS00713|PS00714|SSF118215 BD65_2257 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR036271 Homeobox-like domain superfamily|Tetracyclin repressor-like, C-terminal domain superfamily GO:0003677 G3DSA:1.10.357.10|SSF46689|SSF48498 BD65_2258 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003834|IPR022910|IPR028250|IPR036249|IPR036929 Cytochrome C biogenesis protein, transmembrane domain|Thiol:disulfide interchange protein DsbD, N-terminal domain|Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily|Thiol:disulphide interchange protein DsbD|Thioredoxin-like superfamily GO:0016020|GO:0017004|GO:0047134|GO:0055114 G3DSA:2.60.40.1250|G3DSA:3.40.30.10|MF_00399|PF02683|PF11412|PF13899|SSF52833|SSF74863 BD65_2259 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004323|IPR011322|IPR015867|IPR023700 Divalent cation tolerance protein CutA, Enterobacteria|Divalent ion tolerance protein, CutA|Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0005507|GO:0005737|GO:0010038 G3DSA:3.30.70.120|MF_01160|PF03091|SSF54913 BD65_226 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008183|IPR011013|IPR014718|IPR025532 Aldose 1-/Glucose-6-phosphate 1-epimerase|Galactose mutarotase-like domain superfamily|Glucose-6-phosphate 1-epimerase|Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0016853|GO:0030246 G3DSA:2.70.98.10|PF01263|PIRSF016020|SSF74650 BD65_2260 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 PF03605|PIRSF004539|TIGR00770 BD65_2261 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000362|IPR004708|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Aspartate ammonia-lyase|Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0006099|GO:0006531|GO:0008797|GO:0016829 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10415|PR00145|PR00149|PS00163|SSF48557|TIGR00839 BD65_2262 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007313 FxsA cytoplasmic membrane protein GO:0016020 PF04186 BD65_2263 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011032|IPR018369|IPR020818|IPR037124 Chaperonin GroES, conserved site|GroES chaperonin family|GroES chaperonin superfamily|GroES-like superfamily GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|SM00883|SSF50129 BD65_2264 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027410|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain superfamily|GroEL-like equatorial domain superfamily|TCP-1-like chaperonin intermediate domain superfamily GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.30.260.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 BD65_2265 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025294 Protein of unknown function DUF4156 PF13698 BD65_2266 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003739|IPR007197|IPR013785|IPR022462 Aldolase-type TIM barrel|Lysine-2,3-aminomutase-like|Lysine-2,3-aminomutase/glutamate 2,3-aminomutase|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13394|PIRSF004911|SSF102114|TIGR00238|TIGR03821 BD65_2267 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2, domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain superfamily GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 BD65_2268 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004302|IPR014756 Cellulose/chitin-binding protein, N-terminal|Immunoglobulin E-set G3DSA:2.70.50.50|PF03067|SSF81296 BD65_2269 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal GO:0003677|GO:0006355 G3DSA:3.40.50.12740|PF00196|PR00038|SM00421|SSF46894 BD65_227 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006424|IPR020828|IPR020829|IPR020830|IPR020831|IPR036291 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain superfamily GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|SM00846|SSF51735|SSF55347|TIGR01534 BD65_2270 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000259|IPR008966|IPR036937 Adhesion domain superfamily|Fimbrial-type adhesion domain|Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF00419|SSF49401 BD65_2271 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001829|IPR008962|IPR013783|IPR016147|IPR016148|IPR018046|IPR036316 Immunoglobulin-like fold|PapD-like superfamily|Pili assembly chaperone, C-terminal|Pili assembly chaperone, C-terminal domain superfamily|Pili assembly chaperone, N-terminal|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site GO:0030288|GO:0043711|GO:0061077|GO:0071555 G3DSA:2.60.40.10|PF00345|PF02753|PR00969|PS00635|SSF49354|SSF49584 BD65_2272 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000015|IPR018030|IPR025885|IPR025949|IPR037224 Fimbrial membrane usher, conserved site|Outer membrane usher protein|PapC, N-terminal domain|PapC, N-terminal domain superfamily|PapC-like, C-terminal domain GO:0005515|GO:0009297|GO:0015473|GO:0016020 G3DSA:2.60.40.2070|G3DSA:2.60.40.2610|G3DSA:2.60.40.3110|G3DSA:3.10.20.410|PF00577|PF13953|PF13954|PS01151|SSF141729 BD65_2273 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000259|IPR008966|IPR036937 Adhesion domain superfamily|Fimbrial-type adhesion domain|Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF00419|SSF49401 BD65_2274 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000390 Small multidrug resistance protein family GO:0016021 G3DSA:1.10.3730.20|PF00893|SSF103481 BD65_2275 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000566|IPR002446|IPR012674|IPR022271|IPR022272 Calycin|Lipocalin family conserved site|Lipocalin, ApoD type|Lipocalin, bacterial|Lipocalin/cytosolic fatty-acid binding domain GO:0005215 G3DSA:2.40.128.20|PF08212|PIRSF036893|PR01171|PS00213|SSF50814 BD65_2276 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003418|IPR034804 Fumarate reductase, subunit D|Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0006106|GO:0016020 G3DSA:1.20.1300.10|MF_00709|PD015693|PF02313|PIRSF000179|SSF81343 BD65_2277 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003510|IPR034804 Fumarate reductase, subunit C|Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 G3DSA:1.20.1300.10|MF_00708|PD015900|PF02300|PIRSF000180|SSF81343 BD65_2278 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004489|IPR006058|IPR009051|IPR012675|IPR017896|IPR017900|IPR025192|IPR036010 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-like superfamily|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Beta-grasp domain superfamily|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13183|PS00197|PS00198|SSF46548|SSF54292|TIGR00384 BD65_2279 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003952|IPR003953|IPR005884|IPR014006|IPR015939|IPR027477|IPR036188|IPR037099 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain superfamily|Fumarate reductase, flavoprotein subunit|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PR00368|PR00411|PS00504|SSF46977|SSF51905|SSF56425|TIGR01176|TIGR01812 BD65_228 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002579|IPR011057 Mss4-like superfamily|Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 G3DSA:2.170.150.20|MF_01400|PF01641|SSF51316|TIGR00357 BD65_2280 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004364|IPR004525|IPR018149 Aminoacyl-tRNA synthetase, class II (D/K/N)|Elongation factor P--(R)-beta-lysine ligase|Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:3.30.930.10|MF_00174|PF00152|PR00982|SSF55681|TIGR00462 BD65_2281 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006685|IPR006686|IPR010920|IPR011014|IPR011066|IPR023408|IPR024393|IPR025692 LSM domain superfamily|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS domain superfamily|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, conserved site|Mechanosensitive ion channel MscS, porin domain|Mechanosensitive ion channel MscS, transmembrane-2|Mechanosensitive ion channel inner membrane domain 1 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PF12794|PF12795|PS01246|SSF50182|SSF82689|SSF82861 BD65_2282 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003817|IPR033177|IPR033178 Phosphatidylserine decarboxylase|Phosphatidylserine decarboxylase, prokaryotic type 1|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 MF_00662|PF02666|TIGR00163 BD65_2283 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004881|IPR010914|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Ribosome biogenesis GTPase RsgA|RsgA GTPase domain GO:0003924|GO:0005525 G3DSA:1.10.40.50|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01820|PF03193|SSF52540|TIGR00157 BD65_2284 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012337|IPR013520|IPR022894|IPR036397 Exonuclease, RNase T/DNA polymerase III|Oligoribonuclease|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0000175|GO:0003676 G3DSA:3.30.420.10|MF_00045|PF00929|SM00479|SSF53098 BD65_2288 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004453|IPR009051|IPR013542|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Domain of unknown function DUF1730|Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491|GO:0051536 MF_00916|PF08331|PF13484|PS00198|SSF46548|TIGR00276 BD65_2289 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000631|IPR004443|IPR029056|IPR030677|IPR036652 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Bifunctional NAD(P)H-hydrate repair enzyme Nnr|Ribokinase-like|YjeF N-terminal domain|YjeF N-terminal domain superfamily GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|PF01256|PF03853|PIRSF017184|SSF53613|SSF64153|TIGR00196|TIGR00197 BD65_229 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009749 Protein of unknown function DUF1315 PF07023 BD65_2290 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|SSF52540|TIGR00150 BD65_2291 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002508|IPR018392|IPR021731|IPR036779 AMIN domain|LysM domain|LysM domain superfamily|N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 G3DSA:2.60.40.3500|G3DSA:3.10.350.10|G3DSA:3.40.630.40|PF01476|PF01520|PF11741|SM00257|SM00646|SSF53187|SSF54106 BD65_2292 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002099|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667|IPR036890|IPR037198 DNA mismatch repair protein family, N-terminal|DNA mismatch repair protein, S5 domain 2-like|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase/HSP90-like ATPase superfamily|MutL, C-terminal domain superfamily|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:2.30.42.20|G3DSA:3.30.1370.100|G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 BD65_2293 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018022|IPR027417 IPP transferase|P-loop containing nucleoside triphosphate hydrolase GO:0008033 G3DSA:1.10.20.140|G3DSA:3.40.50.300|MF_00185|PF01715|SSF52540|TIGR00174 BD65_2294 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005001|IPR010920 LSM domain superfamily|RNA-binding protein Hfq GO:0003723|GO:0006355 G3DSA:2.30.30.100|MF_00436|PF17209|SSF50182|TIGR02383 BD65_2295 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305|IPR035647 EF-G domain III/V-like|GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.11060|G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|SSF52540|SSF54980|TIGR03156 BD65_2296 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001107|IPR001972|IPR010201|IPR020980|IPR036013 Band 7 domain|Band 7/SPFH domain superfamily|HflK|Menbrane protein HflK, N-terminal|Stomatin family GO:0016020|GO:0016021 G3DSA:3.30.479.30|PF01145|PF12221|PR00721|SM00244|SSF117892|TIGR01933 BD65_2297 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001107|IPR010200|IPR036013 Band 7 domain|Band 7/SPFH domain superfamily|HflC GO:0016021|GO:0052547 G3DSA:3.30.479.30|PF01145|PIRSF005651|SM00244|SSF117892|TIGR01932 BD65_2298 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019201 Protein of unknown function DUF2065 PF09838 BD65_2299 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|SM00788|SSF52540|TIGR00184 BD65_23 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011722|IPR022866|IPR036623 Heat shock protein HspQ|Hemimethylated DNA-binding domain|Hemimethylated DNA-binding domain superfamily GO:0003677 G3DSA:2.30.30.390|MF_01194|PF08755|SM00992|SSF141255|TIGR02097 BD65_230 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000868|IPR036380 Isochorismatase-like|Isochorismatase-like superfamily GO:0003824 G3DSA:3.40.50.850|PF00857|SSF52499 BD65_2300 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000944|IPR023761|IPR030489|IPR036388|IPR036390 Transcription regulator Rrf2-type|Transcription regulator Rrf2-type, conserved site|Transcriptional repressor HTH, NsrR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0045892 G3DSA:1.10.10.10|MF_01177|PF02082|PS01332|SSF46785|TIGR00738 BD65_2301 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001900|IPR003029|IPR004476|IPR011129|IPR011805|IPR012340|IPR013223|IPR013668|IPR022967 Cold shock domain|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease B, N-terminal OB domain|Ribonuclease II/R|Ribonuclease II/ribonuclease R|Ribonuclease R|Ribonuclease R winged-helix domain|S1 domain GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070 G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PF08206|PF08461|SM00316|SM00357|SM00955|SSF50249|TIGR00358|TIGR02063 BD65_2302 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001537|IPR004441|IPR013123|IPR024915|IPR029026|IPR029028|IPR029064 23S rRNA (guanosine-2-O-)-methyltransferase RlmB|50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|MF_01887|PF00588|PF08032|SM00967|SSF55315|SSF75217|TIGR00186 BD65_2303 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010546 Protein of unknown function DUF1120 PF06551 BD65_2304 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010546 Protein of unknown function DUF1120 PF06551 BD65_2306 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001829|IPR008962|IPR013783|IPR016147 Immunoglobulin-like fold|PapD-like superfamily|Pili assembly chaperone, N-terminal|Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077|GO:0071555 G3DSA:2.60.40.10|PF00345|PR00969|SSF49354 BD65_2307 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000015|IPR025885|IPR025949|IPR037224 Outer membrane usher protein|PapC, N-terminal domain|PapC, N-terminal domain superfamily|PapC-like, C-terminal domain GO:0005515|GO:0009297|GO:0015473|GO:0016020 G3DSA:2.60.40.2610|G3DSA:2.60.40.3110|PF00577|PF13953|PF13954|SSF141729 BD65_2309 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010546 Protein of unknown function DUF1120 PF06551 BD65_231 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006033|IPR006034|IPR020827|IPR027473|IPR027474|IPR027475|IPR036152|IPR037152 Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|Asparaginase/glutaminase-like|Asparaginase/glutaminase-like superfamily|L-asparaginase, C-terminal|L-asparaginase, N-terminal|L-asparaginase, N-terminal domain superfamily|L-asparaginase, type I GO:0004067|GO:0006520 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|SM00870|SSF53774|TIGR00519 BD65_2310 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010854|IPR025543|IPR036275 Dodecin-like|Domain of unknown function DUF1471|YdgH-like superfamily G3DSA:3.30.1660.10|PF07338|SSF159871 BD65_2311 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001375|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:3.40.50.1820|PF00326|SSF53474 BD65_2312 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010854|IPR025543|IPR036275 Dodecin-like|Domain of unknown function DUF1471|YdgH-like superfamily G3DSA:3.30.1660.10|PF07338|SSF159871 BD65_2313 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000529|IPR014717|IPR020814|IPR020815|IPR035980 Ribosomal protein S6|Ribosomal protein S6 superfamily|Ribosomal protein S6, conserved site|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|PS01048|SSF54995|TIGR00166 BD65_2314 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001648|IPR018275|IPR036870 Ribosomal protein S18|Ribosomal protein S18 superfamily|Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PS00057|SSF46911|TIGR00165 BD65_2315 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009027|IPR020069|IPR020070|IPR020594|IPR036791|IPR036935 Ribosomal protein L9, C-terminal|Ribosomal protein L9, C-terminal domain superfamily|Ribosomal protein L9, N-terminal|Ribosomal protein L9, N-terminal domain superfamily|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|SSF55653|SSF55658|TIGR00158 BD65_2316 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007340|IPR013731 Opacity-associated protein A|Opacity-associated protein A, N-terminal G3DSA:3.10.450.350|PF04225|PF08525 BD65_2317 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000774|IPR001179|IPR036944 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|SSF54534 BD65_2318 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012312|IPR019903 Haemerythrin-like|Repair of iron centres family G3DSA:1.20.120.520|PF01814|PF04405|TIGR03652 BD65_2319 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004843|IPR006146|IPR006179|IPR006294|IPR008334|IPR029052|IPR036907 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase|5'-Nucleotidase, C-terminal|5'-Nucleotidase, C-terminal domain superfamily|5'-Nucleotidase, conserved site|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0000166|GO:0008663|GO:0009117|GO:0009166|GO:0016787|GO:0016788|GO:0046872 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|PS00785|PS00786|SSF55816|SSF56300|TIGR01390 BD65_232 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002142|IPR004634|IPR004635|IPR029045 ClpP/crotonase-like domain superfamily|Peptidase S49|Peptidase S49, SppA|Peptidase S49, protease IV GO:0006465|GO:0006508|GO:0008233|GO:0016021 G3DSA:3.40.1750.10|G3DSA:3.90.226.10|PF01343|PIRSF001217|SSF52096|TIGR00705|TIGR00706 BD65_2320 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006513 Conserved hypothetical protein CHP01626, YtfJ G3DSA:3.40.30.10|PF09695|TIGR01626 BD65_2321 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000760|IPR006240|IPR020550 3'(2'),5'-bisphosphate nucleotidase CysQ|Inositol monophosphatase, conserved site|Inositol monophosphatase-like GO:0000287|GO:0006790|GO:0008441|GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_02095|PF00459|PS00630|SSF56655|TIGR01331 BD65_2322 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009491 Protein of unknown function DUF1107 G3DSA:3.30.1910.10|PD055267|PF06526 BD65_2323 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000644|IPR002550|IPR005170|IPR016169|IPR036318 CBS domain|CNNM, transmembrane domain|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|Transporter-associated domain GO:0050660 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|SM00116|SM01091|SSF54631|SSF56176 BD65_2324 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002569|IPR036509 Peptide methionine sulphoxide reductase MsrA|Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|SSF55068|TIGR00401 BD65_2325 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000184|IPR010827|IPR035243 Bacterial surface antigen (D15)|POTRA domain, BamA/TamA-like|TamA, POTRA domain 1 GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103|PF07244|PF17243 BD65_2326 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007452 Translocation and assembly module TamB PF04357 BD65_2327 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009288|IPR036568 Gamma-glutamyl cyclotransferase-like superfamily|Gamma-glutamylcyclotransferase, AIG2-like G3DSA:3.10.490.10|PF06094|SSF110857 BD65_2328 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008162|IPR036649 Inorganic pyrophosphatase|Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|MF_00209|PF00719|PS00387|SSF50324 BD65_2329 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000146|IPR020548|IPR028343|IPR033391 Fructose-1,6-bisphosphatase|Fructose-1,6-bisphosphatase class 1|Fructose-1,6-bisphosphatase, active site|Fructose-1-6-bisphosphatase class I, N-terminal GO:0005975|GO:0016791|GO:0042132|GO:0042578 G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_01855|PF00316|PIRSF000904|PIRSF500210|PR00115|PS00124|SSF56655 BD65_233 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000415|IPR026021|IPR029479 Nitroreductase|Nitroreductase-like|Putative NAD(P)H nitroreductase YdjA-like GO:0016491 G3DSA:3.40.109.10|PF00881|PIRSF000232|SSF55469 BD65_2330 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000713|IPR004101|IPR005757|IPR013221|IPR036565|IPR036615 Mur ligase, C-terminal|Mur ligase, C-terminal domain superfamily|Mur ligase, N-terminal catalytic domain|Mur ligase, central|Mur-like, catalytic domain superfamily|Murein peptide ligase GO:0005524|GO:0009058|GO:0009252|GO:0016874|GO:0016881|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_02020|PF01225|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01081 BD65_2331 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001669|IPR020899|IPR020900|IPR036251|IPR036388|IPR036390 Arginine repressor|Arginine repressor, C-terminal|Arginine repressor, C-terminal domain superfamily|Arginine repressor, DNA-binding domain|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355|GO:0006525|GO:0034618|GO:0051259 G3DSA:1.10.10.10|G3DSA:3.30.1360.40|MF_00173|PD007402|PF01316|PF02863|PR01467|SSF46785|SSF55252|TIGR01529 BD65_2332 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001236|IPR001252|IPR001557|IPR010097|IPR015955|IPR022383|IPR023958|IPR036291 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|Malate dehydrogenase, active site|Malate dehydrogenase, type 1|Malate dehydrogenase, type 1, bacterial|NAD(P)-binding domain superfamily GO:0003824|GO:0005975|GO:0006099|GO:0006108|GO:0016491|GO:0016615|GO:0016616|GO:0019752|GO:0030060|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_01516|PF00056|PF02866|PIRSF000102|PS00068|SSF51735|SSF56327|TIGR01772 BD65_2333 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010982|IPR038722 Lambda repressor-like, DNA-binding domain superfamily|Ner, winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PF13693|SSF47413 BD65_2334 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003314|IPR009061|IPR010749|IPR036388 Mu-type HTH domain|Protein of unknown function DUF1323|Putative DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677 G3DSA:1.10.10.10|PD060594|PF02316|SSF46955 BD65_2335 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003314|IPR009061|IPR036388 Mu-type HTH domain|Putative DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677 G3DSA:1.10.10.10|PF02316|SSF46955 BD65_2336 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000092|IPR008949|IPR033749 Isoprenoid synthase domain superfamily|Polyprenyl synthetase|Polyprenyl synthetase, conserved site GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 BD65_2337 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001787|IPR018258|IPR028909|IPR036164 L21-like superfamily|Ribosomal protein L21|Ribosomal protein L21, conserved site|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|PS01169|SSF141091|TIGR00061 BD65_2338 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|SSF110324|TIGR00062 BD65_2339 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BD65_234 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004536|IPR010918|IPR016188|IPR023061|IPR036676|IPR036921 PurM-like, C-terminal domain|PurM-like, C-terminal domain superfamily|PurM-like, N-terminal domain|PurM-like, N-terminal domain superfamily|Selenophosphate synthetase|Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00625|PF00586|PF02769|PIRSF036407|SSF55326|SSF56042|TIGR00476 BD65_2340 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006073|IPR006074|IPR006169|IPR014100|IPR027417|IPR035101|IPR036726 GTP binding domain|GTP-binding protein Obg/CgtA|GTP-binding protein, Obg-type|GTP1/OBG domain|GTP1/OBG domain superfamily|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|SSF52540|SSF82051|TIGR02729 BD65_2341 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003661|IPR004358|IPR036097|IPR036890 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 BD65_2342 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001867|IPR011006|IPR036388 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BD65_2343 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000667|IPR012338 Beta-lactamase/transpeptidase-like|Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 G3DSA:3.40.710.10|G3DSA:3.50.80.20|PF02113|PR00922|SSF56601|TIGR00666 BD65_2344 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624|IPR036805|IPR036953 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor GreA/GreB, C-terminal domain superfamily|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, N-terminal domain superfamily|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PS00830|SSF46557|SSF54534|TIGR01462 BD65_2345 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001890|IPR017924|IPR035920 RNA-binding protein YhbY|RNA-binding, CRM domain|YhbY-like superfamily GO:0003723 G3DSA:3.30.110.60|PD010559|PF01985|SM01103|SSF75471|TIGR00253 BD65_2346 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002877|IPR004512|IPR015507|IPR029063 Ribosomal RNA large subunit methyltransferase E|Ribosomal RNA methyltransferase E, gammaproteobacteria|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0001510|GO:0006364|GO:0008168|GO:0016436|GO:0032259 G3DSA:3.40.50.150|MF_01547|PF01728|PIRSF005461|SSF53335|TIGR00438 BD65_2347 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417|IPR037219 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase M41-like|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:1.20.58.760|G3DSA:2.40.50.920|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|SM00382|SSF140990|SSF52540|TIGR01241 BD65_2348 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00792|PS00793|SSF51717|TIGR01496 BD65_2349 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055|IPR016066|IPR036900 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, C-terminal domain superfamily|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|SSF53738|SSF55957|TIGR01455 BD65_235 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003601|IPR003602|IPR005738|IPR006171|IPR013497|IPR013824|IPR013825|IPR013826|IPR023405|IPR023406 DNA topoisomerase III|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, central region, subdomain 3|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|TOPRIM domain GO:0003677|GO:0003916|GO:0003917|GO:0006265 G3DSA:1.10.290.10|G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|MF_00953|PF01131|PF01751|PR00417|PS00396|SM00436|SM00437|SM00493|SSF56712|TIGR01056 BD65_2350 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|TIGR00810 BD65_2353 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003728|IPR028989|IPR028998|IPR035956|IPR036847 Ribosome maturation factor RimP|Ribosome maturation factor RimP, C-terminal|Ribosome maturation factor RimP, C-terminal domain superfamily|Ribosome maturation factor RimP, N-terminal|RimP, N-terminal domain superfamily GO:0042274 G3DSA:3.30.300.70|MF_01077|PF02576|PF17384|SSF74942|SSF75420 BD65_2354 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004087|IPR009019|IPR010213|IPR010214|IPR010995|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842|IPR036555 DNA repair Rad51/transcription factor NusA, alpha-helical|K Homology domain|K homology domain superfamily, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|NusA, N-terminal domain superfamily|RNA-binding domain, S1|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination factor NusA, C-terminal duplication|Transcription termination/antitermination protein NusA, bacterial GO:0000166|GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF08529|PF13184|PF14520|SM00316|SM00322|SSF47794|SSF50249|SSF54814|SSF69705|TIGR01953|TIGR01954 BD65_2355 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000178|IPR000795|IPR004161|IPR005225|IPR006847|IPR009000|IPR009061|IPR013575|IPR023115|IPR027417|IPR036925 Initiation factor 2 associated domain, bacterial|P-loop containing nucleoside triphosphate hydrolase|Putative DNA-binding domain superfamily|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor IF-2, domain 3 superfamily|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain superfamily GO:0003743|GO:0003924|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.30.56.50|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF03144|PF04760|PF08364|PF11987|PS01176|SSF46955|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 BD65_2356 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000238|IPR015946|IPR020053|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain superfamily|Ribosome-binding factor A, conserved site GO:0006364 G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|PS01319|SSF89919|TIGR00082 BD65_2357 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002501|IPR014780|IPR015240|IPR015947|IPR020103|IPR032819|IPR036974 PUA domain superfamily|PUA-like superfamily|Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain superfamily|tRNA pseudouridine synthase II, TruB|tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 G3DSA:2.30.130.10|G3DSA:3.30.2350.10|MF_01080|PF01509|PF09157|PF16198|SSF55120|SSF88697|TIGR00431 BD65_2358 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|SM01387|SSF47060|TIGR00952 BD65_2359 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408|IPR036345|IPR036612 Exoribonuclease, PH domain 2 superfamily|Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|K Homology domain, type 1 superfamily|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain superfamily|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|SM00316|SM00322|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 BD65_236 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR015797|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase-like domain superfamily GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|SSF55811 BD65_2360 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990|IPR013105|IPR019734|IPR023605 Lipoprotein NlpI|Tetratricopeptide repeat|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|PF07719|PF13181|PIRSF004654|SM00028|SSF48452 BD65_2361 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR012677|IPR014001|IPR021046|IPR027417|IPR028618 ATP-dependent RNA helicase DEAD-box, conserved site|ATP-dependent RNA helicase DeaD|Cold-shock protein, DEAD box A, C-terminal|DEAD box helicase DbpA/CsdA, RNA-binding domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleotide-binding alpha-beta plait domain superfamily|P-loop containing nucleoside triphosphate hydrolase GO:0000027|GO:0003676|GO:0004004|GO:0005524|GO:0016817|GO:0070417 G3DSA:3.30.70.330|G3DSA:3.40.50.300|MF_00964|PF00270|PF00271|PF03880|PF12343|PS00039|SM00487|SM00490|SSF52540 BD65_2362 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011251|IPR019949|IPR036661 Luciferase family oxidoreductase, group 1|Luciferase-like domain|Luciferase-like domain superfamily GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679|TIGR03558 BD65_2364 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005130|IPR021144 Serine dehydratase-like, alpha subunit|Uncharacterised protein family UPF0597 MF_01845|PF03313|PIRSF006054 BD65_2365 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001539 Peptidase U32 GO:0006508|GO:0008233 PF01136 BD65_2366 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001539|IPR036206 Peptidase U32|Thiamin phosphate synthase superfamily GO:0006508|GO:0008233 PF01136|PS01276|SSF51391 BD65_2367 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003033|IPR016830|IPR036527 SCP2 sterol-binding domain|SCP2 sterol-binding domain superfamily|Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT G3DSA:3.30.1050.10|PF02036|PIRSF025550|SSF55718 BD65_2368 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000305|IPR022992|IPR035901 GIY-YIG endonuclease|GIY-YIG endonuclease superfamily|Uncharacterised protein family UPF0213, GIY-YIG endonuclease G3DSA:3.40.1440.10|MF_01029|PF01541|SSF82771 BD65_2369 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF13508|SSF55729 BD65_237 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009971 Protein of unknown function DUF1496 PF07383 BD65_2370 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004754|IPR027566 Amino acid antiporter|Amino acid/polyamine transporter I|Putrescine transporter PotE GO:0006865|GO:0015496|GO:0015822|GO:0015847|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|MF_02073|PF13520|PIRSF006060|TIGR00905|TIGR04299 BD65_2371 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000310|IPR005308|IPR008286|IPR011006|IPR011193|IPR015421|IPR015422|IPR015424|IPR027464|IPR027568|IPR036633 CheY-like superfamily|Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, C-terminal domain superfamily|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine decarboxylase SpeF|Ornithine decarboxylase, N-terminal|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0004586|GO:0005737|GO:0006520|GO:0016831 G3DSA:3.40.50.220|G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|SSF52172|SSF53383|SSF55904|TIGR04301 BD65_2373 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011194|IPR012349 FMN-binding split barrel|Uncharacterised protein family UPF0306 GO:0048037 G3DSA:2.30.110.10|MF_00764|PIRSF009554|SSF50475 BD65_2374 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001279|IPR017693|IPR036866 Metallo-beta-lactamase|Phosphonate metabolism protein PhnP|Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GO:0008081|GO:0019700 G3DSA:3.60.15.10|PF12706|SSF56281|TIGR03307 BD65_2375 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000534|IPR016040|IPR036291 NAD(P)-binding domain|NAD(P)-binding domain superfamily|Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13460|SM00859|SSF51735 BD65_2376 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008145|IPR012699|IPR027417 Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase|Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00836|PF13238|SM00072|SSF52540|TIGR02322 BD65_2377 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011059|IPR012696|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain superfamily|Phosphonate metabolism PhnM GO:0016810|GO:0019700 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|PIRSF038971|SSF51338|SSF51556|TIGR02318 BD65_2378 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR012701|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphonate C-P lyase system, PhnL GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR02324 BD65_2379 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR012700|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphonate C-P lyase system, PhnK GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF037116|PS00211|SM00382|SSF52540|TIGR02323 BD65_238 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004808|IPR005135|IPR020847|IPR036691 AP endonuclease 1|AP endonuclease 1, binding site|Endonuclease/exonuclease/phosphatase|Endonuclease/exonuclease/phosphatase superfamily GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|SSF56219|TIGR00195|TIGR00633 BD65_2380 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 PF06007|PIRSF011468 BD65_2381 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008773 Phosphonate metabolism protein PhnI GO:0019634 PF05861|PIRSF007313 BD65_2382 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008772|IPR038058 Bacterial phosphonate metabolism, PhnH|PhnH-like superfamily GO:0019634 G3DSA:3.40.50.11310|PF05845|PIRSF020680|SSF159709|TIGR03292 BD65_2383 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 PF06754|TIGR03293 BD65_2385 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001989|IPR012837|IPR013785 Aldolase-type TIM barrel|Radical-activating enzyme, conserved site|Ribonucleoside-triphosphate reductase activating, anaerobic GO:0003824|GO:0005737|GO:0016491|GO:0043365|GO:0051539|GO:0055114 G3DSA:3.20.20.70|PF13353|PIRSF000368|PS01087|SSF102114|TIGR02491 BD65_2386 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005144|IPR012833|IPR019777 ATP-cone domain|Formate C-acetyltransferase glycine radical, conserved site|Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 G3DSA:3.20.70.20|PF03477|PF13597|PS00850|SSF51998|TIGR02487 BD65_2387 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002292|IPR006130|IPR006131|IPR006132|IPR024904|IPR036901 Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase superfamily|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PS00097|SSF53671|TIGR00658 BD65_2388 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009671|IPR016716|IPR036701 Regulator of ribonuclease activity B|Regulator of ribonuclease activity B domain|RraB-like superfamily G3DSA:3.30.70.970|MF_01888|PF06877|PIRSF018193|SSF89946 BD65_2389 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF00583|SSF55729 BD65_239 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002196|IPR023346 Glycoside hydrolase, family 24|Lysozyme-like domain superfamily GO:0003796|GO:0009253|GO:0016998 G3DSA:1.10.530.40|PF00959|SSF53955 BD65_2390 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499|IPR037118 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl-tRNA synthetase, tRNA-binding arm superfamily|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 BD65_2391 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007459|IPR036768 DNA polymerase III chi subunit, HolC|DNA polymerase III subunit chi superfamily GO:0003677|GO:0003887|GO:0006260 G3DSA:3.40.50.10110|PF04364|SSF102400 BD65_2392 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000819|IPR008283|IPR011356|IPR023042 Peptidase M17, leucine aminopeptidase|Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.220.10|G3DSA:3.40.630.10|MF_00181|PF00883|PF02789|PR00481|PS00631|SSF52949|SSF53187 BD65_2393 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005495|IPR030922 LPS export ABC transporter permease LptF|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|TIGR04407 BD65_2394 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005495|IPR030923 LPS export ABC transporter permease LptG|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|TIGR04408 BD65_2396 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002104|IPR010998|IPR011010|IPR013762|IPR025166|IPR038488 DNA breaking-rejoining enzyme, catalytic core|Integrase, DNA-binding domain|Integrase, DNA-binding domain superfamily|Integrase, catalytic domain|Integrase-like, catalytic domain superfamily|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|G3DSA:3.30.160.390|PF00589|PF13356|SSF56349 BD65_2397 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017647 DNA phosphorothioation-dependent restriction protein DptF TIGR03238 BD65_2398 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017645 DNA phosphorothioation-dependent restriction protein DptG TIGR03236 BD65_2399 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002789|IPR017646|IPR027417 DNA phosphorothioation-dependent restriction protein DptH|Helicase HerA, central domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01935|SSF52540|TIGR03237 BD65_24 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002478|IPR015947|IPR019614|IPR023542|IPR029063|IPR036974 PUA domain|PUA domain superfamily|PUA-like superfamily|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosylmethionine-dependent methyltransferase|rRNA large subunit methyltransferase I GO:0003723|GO:0008168|GO:0008649 G3DSA:2.30.130.10|G3DSA:3.30.750.80|G3DSA:3.40.50.150|MF_01857|PF10672|SM00359|SSF53335|SSF88697 BD65_240 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR036388|IPR036390 Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF00126|SSF46785 BD65_2401 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017601|IPR017642 DGQHR-containing domain|DNA sulphur modification protein DndB PF14072|TIGR03187 BD65_2402 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014969|IPR038472 DNA sulphur modification protein DndE|DndE superfamily G3DSA:1.10.1220.160|PF08870|TIGR03184 BD65_2403 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017599|IPR027417|IPR038729 DNA sulphur modification protein DndD|P-loop containing nucleoside triphosphate hydrolase|Rad50/SbcC-type AAA domain G3DSA:3.40.50.300|PF13476|SSF52540|TIGR03185 BD65_2404 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002500|IPR014729|IPR017598 Phosphoadenosine phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold|Sulphur transferase DndC, putative GO:0003824 G3DSA:3.40.50.620|PF01507|SSF52402|TIGR03183 BD65_2405 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017601|IPR017642 DGQHR-containing domain|DNA sulphur modification protein DndB PF14072|TIGR03187|TIGR03233 BD65_2407 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:1.10.238.160|PF12728 BD65_2408 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic PF11726 BD65_2410 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527|SSF46689 BD65_2411 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR025948|IPR036397 HTH-like domain|Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|SSF53098 BD65_2412 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR025948|IPR036397 HTH-like domain|Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|SSF53098 BD65_2413 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BD65_2414 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002725 Protein of unknown function DUF45 G3DSA:3.30.2010.10|PF01863 BD65_2415 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004473|IPR006935|IPR007409|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR|Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0009035|GO:0009307|GO:0016787 G3DSA:3.40.50.300|G3DSA:3.90.1570.50|PF04313|PF04851|SM00487|SSF52540|TIGR00348 BD65_2416 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002589 Macro domain G3DSA:3.40.220.10|PF01661|SM00506|SSF52949 BD65_2417 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR029494 Domain of unknown function DUF4433 PF14487 BD65_2418 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR029494 Domain of unknown function DUF4433 PF14487 BD65_2419 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 G3DSA:1.10.287.1120|G3DSA:3.90.220.20|PF01420|SSF116734 BD65_2420 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002052|IPR003356|IPR004546|IPR022749|IPR029063|IPR038333 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily|Restriction endonuclease, type I, HsdM|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0009007|GO:0009307|GO:0032259 G3DSA:1.20.1260.30|G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|SSF53335|TIGR00497 BD65_2422 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002104|IPR010998|IPR011010|IPR013762|IPR025166|IPR038488 DNA breaking-rejoining enzyme, catalytic core|Integrase, DNA-binding domain|Integrase, DNA-binding domain superfamily|Integrase, catalytic domain|Integrase-like, catalytic domain superfamily|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|G3DSA:3.30.160.390|PF00589|PF13356|SSF56349 BD65_2423 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 BD65_2424 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025159 Transcriptional regulator, AbiEi antitoxin PF13338 BD65_2425 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031339 Domain of unknown function DUF4942 PF13708 BD65_2426 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR036397 Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 BD65_2427 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527|SSF46689 BD65_2428 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006652|IPR015915|IPR019936 Kelch repeat type 1|Kelch-type beta propeller|Mutatrotase, YjhT-like GO:0005515 G3DSA:2.120.10.80|PF01344|SSF117281|TIGR03547 BD65_2429 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009331 Oligogalacturonate-specific porin G3DSA:2.40.160.40|PF06178|SSF56935 BD65_243 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002376|IPR002912|IPR004810|IPR036477 ACT domain|Formyl transferase, N-terminal|Formyl transferase, N-terminal domain superfamily|Formyltetrahydrofolate deformylase GO:0006189|GO:0008864|GO:0009058|GO:0016742 G3DSA:3.30.70.260|G3DSA:3.40.50.170|MF_01927|PF00551|PF01842|PIRSF036480|PR01575|SSF53328|SSF55021|TIGR00655 BD65_2430 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003159|IPR004103|IPR008929|IPR011013|IPR011071|IPR012970|IPR014718 Chondroitin AC/alginate lyase|Galactose mutarotase-like domain superfamily|Glycoside hydrolase-type carbohydrate-binding|Polysaccharide lyase 8, N-terminal alpha-helical|Polysaccharide lyase family 8, C-terminal|Polysaccharide lyase family 8, central domain|Polysaccharide lyase family 8-like, C-terminal GO:0003824|GO:0005576|GO:0005975|GO:0016829|GO:0030246 G3DSA:1.50.10.100|G3DSA:2.60.220.10|G3DSA:2.70.98.10|PF02278|PF02884|PF08124|SSF48230|SSF49863|SSF74650 BD65_2431 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031605 Putative OMPG-porin 1 family PF16946 BD65_2432 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005546|IPR006315|IPR036709 Autotransporter beta-domain|Autotransporter beta-domain superfamily|Outer membrane autotransporter barrel GO:0019867 G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|TIGR01414 BD65_2433 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003159|IPR008929|IPR008979|IPR011013|IPR011071|IPR014718|IPR015176|IPR015177|IPR024200 Chondroitin AC/alginate lyase|Chondroitin sulfate ABC endolyase|Galactose mutarotase-like domain superfamily|Galactose-binding-like domain superfamily|Glycoside hydrolase-type carbohydrate-binding|Lyase, N-terminal|Lyase, catalytic|Polysaccharide lyase family 8, central domain|Polysaccharide lyase family 8-like, C-terminal GO:0003824|GO:0005576|GO:0005975|GO:0016829|GO:0030246|GO:0034000 G3DSA:1.50.10.100|G3DSA:2.60.120.430|G3DSA:2.60.220.10|G3DSA:2.70.98.10|PF02278|PF09092|PF09093|PIRSF034515|SSF48230|SSF49785|SSF49863|SSF74650 BD65_2434 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain superfamily|Sulfatase, N-terminal GO:0003824|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|SSF53649 BD65_2435 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001034|IPR014036|IPR036388|IPR036390|IPR037171 DeoR C-terminal sensor domain|DeoR-type HTH domain|NagB/RpiA transferase-like|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|PF00455|PF08220|PR00037|SM00420|SM01134|SSF100950|SSF46785 BD65_2436 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012062|IPR013785 Aldolase-type TIM barrel|D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0003824|GO:0019402 G3DSA:1.10.400.20|G3DSA:3.20.20.70|PF08013|PIRSF009264|SSF51569|TIGR02810 BD65_2437 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001347|IPR014180 Sugar isomerase (SIS)|Sugar isomerase, AgaS GO:0016853|GO:0097367|GO:1901135 G3DSA:3.40.50.10490|PF01380|SSF53697|TIGR02815 BD65_2438 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004720|IPR018455|IPR036667 Phosphotransferase system, sorbose subfamily IIB component|Phosphotransferase system, sorbose subfamily IIB component superfamily|Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 G3DSA:3.40.35.10|PF03830|SSF52728|TIGR00854 BD65_2439 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 PF03609 BD65_244 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004027|IPR023006|IPR032710 NTF2-like domain superfamily|SEC-C motif|Uncharacterised protein family UPF0225 G3DSA:3.10.450.50|MF_00612|PF02810|SSF103642|SSF54427 BD65_2440 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 PF03613 BD65_2441 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004701|IPR036662 Phosphotransferase system, mannose-type IIA component|Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 G3DSA:3.40.50.510|PF03610|SSF53062 BD65_2442 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003764|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain superfamily|N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PIRSF038994|SSF51338|SSF51556|TIGR00221 BD65_2443 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007045|IPR011051|IPR014710|IPR021120|IPR027449 5-keto 4-deoxyuronate isomerase|5-keto-4-deoxyuronate isomerase, N-terminal|KduI/IolB isomerase|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold GO:0008697|GO:0016861|GO:0045490 G3DSA:2.60.120.10|G3DSA:2.60.120.520|MF_00687|PF04962|PIRSF006625|SSF51182 BD65_2444 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR011286|IPR020904|IPR036291 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase|NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0008678|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735|TIGR01832 BD65_2445 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008928|IPR010905|IPR012341 Glycosyl hydrolase, family 88|Six-hairpin glycosidase superfamily|Six-hairpin glycosidase-like superfamily GO:0003824 G3DSA:1.50.10.10|PF07470|SSF48208 BD65_2446 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007197|IPR013785|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PD968187|PF04055|PF13186|SSF102114|TIGR03942|TIGR04085 BD65_2447 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000917|IPR017849|IPR017850|IPR024607 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain superfamily|Sulfatase, N-terminal|Sulfatase, conserved site GO:0003824|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PS00149|SSF53649 BD65_2448 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016624 Uncharacterised conserved protein UCP014753 PF10022|PIRSF014753 BD65_2449 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000771|IPR011288|IPR013785 Aldolase-type TIM barrel|D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY|Fructose-bisphosphate aldolase, class-II GO:0003824|GO:0005975|GO:0008270|GO:0009025|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00806|SSF51569|TIGR00167|TIGR01858 BD65_245 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin-like phospholipase domain GO:0006629 G3DSA:3.40.1090.10|PF01734|SSF52151 BD65_2450 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|SSF52317 BD65_2451 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019637 Protein of unknown function DUF2501 PF10696 BD65_2452 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002201|IPR011916 Glycosyl transferase, family 9|Lipopolysaccharide heptosyltransferase III, putative GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756|TIGR02201 BD65_2453 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007016 O-antigen ligase-related PF04932 BD65_2454 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0005215|GO:0016020|GO:0055085 G3DSA:1.10.287.470|G3DSA:2.40.30.170|G3DSA:2.40.420.20|G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BD65_2455 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0016020|GO:0022857|GO:0055085 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BD65_2456 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001670|IPR016205|IPR018211 Alcohol dehydrogenase, iron-type, conserved site|Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA|Glycerol dehydrogenase GO:0016491|GO:0016614|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PIRSF000112|PS00060|PS00913|SSF56796 BD65_2457 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004006|IPR012736 DhaK domain|Dihydroxyacetone kinase DhaK, subunit 1 GO:0004371|GO:0006071 G3DSA:3.30.1180.20|G3DSA:3.40.50.10440|PF02733|SSF82549|TIGR02363 BD65_2458 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004007|IPR012737|IPR036117 DhaL domain|DhaL domain superfamily|Dihydroxyacetone kinase, subunit L GO:0004371|GO:0006071|GO:0016772 G3DSA:1.25.40.340|PF02734|SM01120|SSF101473|TIGR02365 BD65_2459 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000032|IPR001020|IPR004701|IPR008279|IPR008731|IPR012844|IPR035895|IPR036618|IPR036637|IPR036662 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain|HPr-like superfamily|PEP-utilising enzyme, mobile domain|Phosphocarrier protein HPr-like|Phosphohistidine domain superfamily|Phosphotransferase system, HPr histidine phosphorylation site|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, mannose-type IIA component|Phosphotransferase system, mannose-type IIA component superfamily|PtsI, HPr-binding domain superfamily GO:0009401|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.30.1340.10|G3DSA:3.40.50.510|G3DSA:3.50.30.10|PF00381|PF00391|PF03610|PF05524|PR00107|PS00369|SSF47831|SSF52009|SSF53062|SSF55594|TIGR01003|TIGR02364 BD65_246 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR011006|IPR028616|IPR036457 CheY-like superfamily|PPM-type phosphatase domain superfamily|Regulator of RpoS|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|G3DSA:3.60.40.10|MF_00958|PF00072|SM00448|SSF52172 BD65_2460 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR002078|IPR002197|IPR009057|IPR013767|IPR025662|IPR027417|IPR029016|IPR035965 DNA binding HTH domain, Fis-type|GAF-like domain superfamily|Homeobox-like domain superfamily|P-loop containing nucleoside triphosphate hydrolase|PAS domain|PAS domain superfamily|PAS fold|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1 GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF00989|PF02954|PS00675|SM00091|SSF46689|SSF52540|SSF55785 BD65_2461 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BD65_2462 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009885 Protein of unknown function DUF1435 PD058594|PF07256 BD65_2466 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002052|IPR007848|IPR013675|IPR023543|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Methyltransferase small, N-terminal|S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase C GO:0003676|GO:0006364|GO:0008168|GO:0008649|GO:0008990|GO:0032259 G3DSA:3.40.50.150|MF_01862|PF05175|PF08468|PS00092|SSF53335 BD65_2467 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004615|IPR036654 DNA polymerase III, psi subunit|DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 G3DSA:3.40.50.10220|PD032475|PF03603|PIRSF029225|SSF102220 BD65_2468 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR006464|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 G3DSA:3.40.630.30|PF00583|SSF55729|TIGR01575 BD65_2469 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000795|IPR004161|IPR004548|IPR005225|IPR009000|IPR027417|IPR031157|IPR032090|IPR035647|IPR038467 EF-G domain III/V-like|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Peptide chain release factor 3, C-terminal|Peptide chain release factor 3, C-terminal domain superfamily|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain superfamily GO:0003924|GO:0005525|GO:0005737|GO:0006415 G3DSA:3.30.70.3280|G3DSA:3.40.50.300|MF_00072|PF00009|PF03144|PF16658|PR00315|PS00301|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503 BD65_247 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR017476|IPR028357|IPR036220|IPR036291 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|NAD(P)-binding domain superfamily|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 BD65_2470 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|SM00749 BD65_2471 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009760 Protein of unknown function DUF1328 GO:0005886 MF_01361|PF07043|PIRSF036466 BD65_2472 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin-like phospholipase domain GO:0006629 G3DSA:3.40.1090.10|PF01734|SSF52151 BD65_2473 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001130|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01090|PS01137|SSF51556 BD65_2474 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002668|IPR011642|IPR011657|IPR018270 Concentrative nucleoside transporter C-terminal domain|Concentrative nucleoside transporter N-terminal domain|Concentrative nucleoside transporter, metazoan/bacterial|Nucleoside transporter/FeoB GTPase, Gate domain GO:0005337|GO:0016020|GO:1901642 PF01773|PF07662|PF07670|TIGR00804 BD65_2475 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002915|IPR011343|IPR013785|IPR023649 Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase|Deoxyribose-phosphate aldolase|Deoxyribose-phosphate aldolase type II GO:0003824|GO:0004139|GO:0005737|GO:0009264|GO:0016829 G3DSA:3.20.20.70|MF_00592|PF01791|PIRSF001357|SM01133|SSF51569|TIGR00126 BD65_2476 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000053|IPR000312|IPR013102|IPR013465|IPR017459|IPR017872|IPR018090|IPR035902|IPR036320|IPR036566 Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase family 3, N-terminal domain superfamily|Glycosyl transferase, family 3|Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily|Pyrimidine nucleoside phosphorylase, C-terminal|Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily|Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic|Pyrimidine-nucleoside phosphorylase, conserved site|Thymidine phosphorylase|Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206|GO:0006213|GO:0009032|GO:0016154|GO:0016757|GO:0016763 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|G3DSA:3.90.1170.30|MF_01628|PF00591|PF02885|PF07831|PIRSF000478|PS00647|SM00941|SSF47648|SSF52418|SSF54680|TIGR02643|TIGR02644 BD65_2477 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006124|IPR010045|IPR017849|IPR017850|IPR024052 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain superfamily|Metalloenzyme|Phosphopentomutase|Phosphopentomutase DeoB cap domain superfamily GO:0000287|GO:0003824|GO:0005737|GO:0008973|GO:0009117|GO:0043094|GO:0046872 G3DSA:3.30.70.1250|G3DSA:3.40.720.10|MF_00740|PF01676|PIRSF001491|SSF143856|SSF53649|TIGR01696 BD65_2478 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000845|IPR004402|IPR018016|IPR035994 Nucleoside phosphorylase domain|Nucleoside phosphorylase superfamily|Nucleoside phosphorylase, conserved site|Purine nucleoside phosphorylase DeoD-type GO:0003824|GO:0004731|GO:0006139|GO:0009116|GO:0016763 G3DSA:3.40.50.1580|MF_01627|PF01048|PS01232|SSF53167|TIGR00107 BD65_2479 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019305 Uncharacterised protein family Smp PF10144 BD65_248 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001801|IPR027444|IPR027454|IPR037150 Histone-like protein H-NS|Histone-like protein H-NS, C-terminal domain|Histone-like protein H-NS, C-terminal domain superfamily|Histone-like protein H-NS, N-terminal GO:0003677|GO:0005622|GO:0006355|GO:0046983 G3DSA:1.10.287.1050|G3DSA:4.10.430.10|PF00816|PIRSF002096|SM00528|SSF81273 BD65_2480 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023190|IPR023214|IPR036412 HAD superfamily|HAD-like superfamily|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 G3DSA:1.10.150.210|G3DSA:3.30.70.2020|G3DSA:3.40.50.1000|PF12710|SSF56784|TIGR00338|TIGR01488 BD65_2481 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01498|PF13481|PF13541|PR01874|SM00382|SSF52540|SSF54211|TIGR00416 BD65_2482 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001387|IPR004821|IPR006417|IPR010982|IPR014729|IPR016429|IPR027417|IPR038727 Bifunctional transcriptional regulator NadR|Cro/C1-type helix-turn-helix domain|Cytidyltransferase-like domain|Lambda repressor-like, DNA-binding domain superfamily|NadR/Ttd14, AAA domain|Nicotinamide-nucleotide adenylyltransferase|P-loop containing nucleoside triphosphate hydrolase|Rossmann-like alpha/beta/alpha sandwich fold GO:0000309|GO:0003677|GO:0003824|GO:0009058|GO:0009435|GO:0043565|GO:0045892 G3DSA:1.10.260.40|G3DSA:3.40.50.300|G3DSA:3.40.50.620|PF01381|PF13521|PIRSF004776|SM00530|SSF47413|SSF52374|SSF52540|TIGR00125|TIGR01526 BD65_2483 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR022374|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|Energy-dependent translational throttle protein EttA|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0045900 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540|TIGR03719 BD65_2484 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001757|IPR004014|IPR006068|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299|IPR036412 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD superfamily|HAD-like superfamily|P-type ATPase|P-type ATPase, A domain superfamily|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, transmembrane domain superfamily GO:0000166|GO:0016021 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00689|PF00690|PF00702|PR00119|PR00120|PS00154|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494 BD65_2485 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000189|IPR008258|IPR008939|IPR012289|IPR023346|IPR037061 Lysozyme-like domain superfamily|Lytic transglycosylase, superhelical U-shaped|Lytic transglycosylase, superhelical linker|Lytic transglycosylase, superhelical linker domain superfamily|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0004553|GO:0008933|GO:0016020|GO:0042597 G3DSA:1.10.1240.20|G3DSA:1.10.530.10|G3DSA:1.25.20.10|PF01464|PF14718|PS00922|SSF48435|SSF53955 BD65_2486 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000831|IPR010921|IPR013335|IPR038116 Trp repressor|Trp repressor, bacterial|Trp repressor/replication initiator|TrpR-like superfamily GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.1270.10|MF_00475|PD012582|PF01371|PIRSF003196|SSF48295|TIGR01321 BD65_2487 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002786|IPR026533|IPR029001 Inosine triphosphate pyrophosphatase-like|Non-canonical purine NTP phosphatase|Non-canonical purine NTP phosphatase/PRRC1 G3DSA:3.90.950.10|MF_00648|PF01931|SSF52972|TIGR00258 BD65_2488 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR010499|IPR011256|IPR018060|IPR018062|IPR020449|IPR029442 Bacterial transcription activator, effector binding|DNA binding HTH domain, AraC-type|GyrI-like small molecule binding domain|HTH domain AraC-type, conserved site|Homeobox-like domain superfamily|Regulatory factor, effector binding domain superfamily|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.20.80.10|PF06445|PF12833|PR00032|PS00041|SM00342|SM00871|SSF46689|SSF55136 BD65_2489 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001345|IPR013078|IPR023086|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase, GpmB, probable|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096 G3DSA:3.40.50.1240|MF_01040|PF00300|PIRSF000709|PS00175|SM00855|SSF53254 BD65_249 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001267|IPR020633|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidine kinase|Thymidine kinase, conserved site GO:0004797|GO:0005524 G3DSA:3.30.60.20|G3DSA:3.40.50.300|MF_00124|PF00265|PIRSF035805|PS00603|SSF52540|SSF57716 BD65_2490 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010292 Uncharacterised protein family CreA PF05981|PIRSF003174 BD65_2491 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001867|IPR011006|IPR016032|IPR036388 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BD65_2492 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001048|IPR001341|IPR001342|IPR002912|IPR005106|IPR011147|IPR018042|IPR019811|IPR027795|IPR036291|IPR036393 ACT domain|Acetylglutamate kinase-like superfamily|Aspartate kinase|Aspartate kinase, conserved site|Aspartate/glutamate/uridylate kinase|Aspartate/homoserine dehydrogenase, NAD-binding|Bifunctional aspartokinase/homoserine dehydrogenase I|CASTOR, ACT domain|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain superfamily GO:0004072|GO:0004412|GO:0006520|GO:0008652|GO:0009067|GO:0016491|GO:0050661|GO:0055114 G3DSA:3.30.2130.10|G3DSA:3.30.360.10|G3DSA:3.40.1160.10|G3DSA:3.40.50.720|PF00696|PF00742|PF01842|PF03447|PF13840|PIRSF000727|PS00324|PS01042|SSF51735|SSF53633|SSF55021|SSF55347|TIGR00657 BD65_2493 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000870|IPR006203|IPR006204|IPR013750|IPR014721|IPR020568|IPR036554 GHMP kinase N-terminal domain|GHMP kinase, ATP-binding, conserved site|GHMP kinase, C-terminal domain|GHMP kinase, C-terminal domain superfamily|Homoserine kinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004413|GO:0005524|GO:0006566 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00384|PF00288|PF08544|PIRSF000676|PR00958|PS00627|SSF54211|SSF55060|TIGR00191 BD65_2494 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000634|IPR001926|IPR004450|IPR029144|IPR036052|IPR037158 Pyridoxal-phosphate dependent enzyme|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine synthase, N-terminal|Threonine synthase, N-terminal domain superfamily|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0006520|GO:0030170 G3DSA:3.40.50.1100|G3DSA:3.90.1380.10|PF00291|PF14821|PS00165|SSF53686|TIGR00260 BD65_2495 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005583 Peroxide stress protein YaaA MF_00652|PF03883 BD65_2496 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001585|IPR004730|IPR013785|IPR018225 Aldolase-type TIM barrel|Transaldolase type 1|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0004801|GO:0005737|GO:0005975|GO:0006098 G3DSA:3.20.20.70|MF_00492|PF00923|PS00958|PS01054|SSF51569|TIGR00874 BD65_2497 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001453|IPR008284|IPR036425 MoaB/Mog domain|MoaB/Mog-like domain superfamily|Molybdenum cofactor biosynthesis, conserved site GO:0006777 G3DSA:3.40.980.10|PF00994|PS01078|SM00852|SSF53218|TIGR00177 BD65_2498 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BD65_2499 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001064|IPR011024|IPR016181 Acyl-CoA N-acyltransferase|Beta/gamma crystallin|Gamma-crystallin-like G3DSA:2.60.20.10|G3DSA:3.40.630.30|PF00030|SSF49695|SSF55729 BD65_25 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001792|IPR017968|IPR028627|IPR036046 Acylphosphatase, bacteria|Acylphosphatase, conserved site|Acylphosphatase-like domain|Acylphosphatase-like domain superfamily GO:0003998 G3DSA:3.30.70.100|MF_01450|PF00708|PS00150|PS00151|SSF54975 BD65_250 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001670|IPR012079|IPR015590|IPR016161|IPR016162|IPR016163|IPR018211 Alcohol dehydrogenase, iron-type, conserved site|Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde/histidinol dehydrogenase|Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0016491|GO:0016620|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.309.10|G3DSA:3.40.50.1970|G3DSA:3.40.605.10|PF00171|PF00465|PIRSF000111|PS00060|PS00913|SSF53720|SSF56796 BD65_2500 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 PF01184 BD65_2501 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain superfamily|Heat shock protein 70kD, peptide-binding domain superfamily GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|SSF100920|SSF100934|SSF53067|TIGR02350 BD65_2502 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253|IPR036410|IPR036869 Chaperone DnaJ|Chaperone DnaJ, C-terminal|Chaperone J-domain superfamily|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain|Heat shock protein DnaJ, cysteine-rich domain superfamily GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 BD65_2503 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004670|IPR023171 Na+/H+ antiporter NhaA|Na/H antiporter domain superfamily GO:0006814|GO:0006885|GO:0016021 G3DSA:1.20.1530.10|MF_01844|PF06965|TIGR00773 BD65_2504 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BD65_2505 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002583|IPR036510 Ribosomal protein S20|Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|SSF46992|TIGR00029 BD65_2506 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002606|IPR004821|IPR014729|IPR015864|IPR015865|IPR023465 Cytidyltransferase-like domain|FAD synthetase|Riboflavin kinase domain superfamily|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0003919|GO:0008531|GO:0009058|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|SM00904|SSF52374|SSF82114|TIGR00083|TIGR00125 BD65_2507 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR010663|IPR013155|IPR014729|IPR023585 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|Zinc finger, FPG/IleRS-type GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.20|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF06827|PF08264|PR00984|PS00178|SSF47323|SSF50677|SSF52374|TIGR00392 BD65_2508 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PS00855|TIGR00077 BD65_2509 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain G3DSA:2.40.10.330|G3DSA:3.10.50.40|PF00254|SSF54534 BD65_251 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|TIGR00427 BD65_2510 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 G3DSA:3.40.1010.20|G3DSA:3.40.50.11270|MF_00191|PF02401|TIGR00216 BD65_2511 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000846|IPR022663|IPR022664|IPR023940|IPR036291 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain superfamily GO:0008839|GO:0009089|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|SSF51735|SSF55347|TIGR00036 BD65_2512 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002474|IPR006274|IPR017926|IPR029062|IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain|Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily|Carbamoyl-phosphate synthase, small subunit|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|SM01097|SSF52021|SSF52317|TIGR01368 BD65_2513 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR016185|IPR036897|IPR036914 Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily|Methylglyoxal synthase-like domain|Methylglyoxal synthase-like domain superfamily|Pre-ATP-grasp domain superfamily GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_A|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00866|PS00867|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 BD65_2514 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PF01810|PIRSF006324 BD65_2516 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010619 Putative threonine/serine exporter PF06738 BD65_2517 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020914|IPR024528 Threonine/Serine exporter, ThrE|Uncharacterised protein family UPF0442 MF_01191|PF12821 BD65_2518 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001796|IPR012259|IPR017925|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase conserved site|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain superfamily GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PIRSF000194|PR00070|PS00075|SSF53597 BD65_2519 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022231 Protein of unknown function DUF3757 PF12582 BD65_252 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BD65_2520 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004617|IPR004843|IPR029052 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)|Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0008803|GO:0016787 G3DSA:3.60.21.10|MF_00199|PF00149|PIRSF000903|SSF56300|TIGR00668 BD65_2521 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007474|IPR023065|IPR036767 ApaG domain|ApaG domain superfamily|Uncharacterised protein family ApaG G3DSA:2.60.40.1470|MF_00791|PF04379|SSF110069 BD65_2522 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|SM00650|SSF53335|TIGR00755 BD65_2523 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005255|IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase|PdxA family GO:0042823|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|SSF53659|TIGR00557 BD65_2524 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000297|IPR015391|IPR023034|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl isomerase SurA|SurA N-terminal|Trigger factor/SurA domain superfamily GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 G3DSA:1.10.4030.10|G3DSA:3.10.50.40|MF_01183|PF00639|PF09312|SSF109998|SSF54534 BD65_2525 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005653|IPR007543|IPR020889 LPS-assembly protein LptD|Organic solvent tolerance protein, C-terminal|Organic solvent tolerance-like, N-terminal GO:0009279|GO:0010033|GO:0015920|GO:0019867|GO:0043165|GO:0061024 G3DSA:2.60.450.10|MF_01411|PF03968|PF04453 BD65_2526 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001623|IPR007791|IPR023749|IPR029024|IPR036869 Chaperone J-domain superfamily|Co-chaperone DjlA|Co-chaperone DjlA, N-terminal|DnaJ domain|TerB-like GO:0051087 G3DSA:1.10.287.110|G3DSA:1.10.3680.10|MF_01153|PF00226|PF05099|PR00625|SM00271|SSF46565 BD65_2527 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006145|IPR006224|IPR020103 Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.2350.10|PF00849|PS01129|SSF55120 BD65_2528 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000330|IPR001650|IPR014001|IPR022737|IPR023949|IPR027417|IPR038718 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase recycling, bacterial, C-terminal|RNA polymerase-associated protein RapA|SNF2-like, N-terminal domain superfamily|SNF2-related, N-terminal domain GO:0005524|GO:0006355|GO:0016817 G3DSA:2.30.30.140|G3DSA:2.30.30.930|G3DSA:3.30.360.80|G3DSA:3.40.50.10810|G3DSA:3.40.50.300|MF_01821|PF00176|PF00271|PF12137|SM00487|SM00490|SSF52540 BD65_2529 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006133|IPR006134|IPR006172|IPR012337|IPR017964|IPR023211|IPR036397 DNA polymerase, palm domain superfamily|DNA-directed DNA polymerase, family B|DNA-directed DNA polymerase, family B, conserved site|DNA-directed DNA polymerase, family B, exonuclease domain|DNA-directed DNA polymerase, family B, multifunctional domain|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0000166|GO:0003676|GO:0003677|GO:0003887 G3DSA:1.10.132.60|G3DSA:3.30.420.10|G3DSA:3.30.70.2250|G3DSA:3.90.1600.10|PF00136|PF03104|PR00106|PS00116|SM00486|SSF53098|SSF56672 BD65_253 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|SSF53850 BD65_2530 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR005968|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0016887|GO:0042626|GO:0071934 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR01277 BD65_2531 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032816 SNARE associated Golgi protein PF09335 BD65_2532 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR005947|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016020|GO:0016021|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01253 BD65_2533 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005948|IPR005967|IPR006059 Bacterial extracellular solute-binding protein|Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria|Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 G3DSA:3.40.190.10|PF01547|SSF53850|TIGR01254|TIGR01276 BD65_2534 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000914|IPR023767|IPR025370|IPR036390 Solute-binding protein family 5 domain|Transcriptional regulator SgrR|Transcriptional regulator SgrR, N-terminal HTH domain|Winged helix DNA-binding domain superfamily G3DSA:3.40.190.10|MF_01449|PF00496|PF12793|SSF46785|SSF53850 BD65_2535 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 PF15894 BD65_2536 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BD65_2537 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000573|IPR004431|IPR015928 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel GO:0003861|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|SSF52016|TIGR00171 BD65_2538 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001030|IPR004430|IPR015931|IPR018136|IPR036008 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase, iron-sulfur domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0003861|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.30.499.20|MF_01026|PF00330|PR00415|PS00450|PS01244|SSF53732|TIGR00170 BD65_2539 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004429|IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|SM01329|SSF53659|TIGR00169 BD65_254 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_2540 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000891|IPR002034|IPR005671|IPR013709|IPR013785|IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily|2-isopropylmalate synthase, bacterial-type|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:1.10.238.260|G3DSA:3.20.20.70|G3DSA:3.30.160.270|MF_01025|PF00682|PF08502|PS00815|PS00816|SM00917|SSF110921|SSF51569|TIGR00973 BD65_2541 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_2542 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824 G3DSA:3.40.50.12780|PF00501|PS00455|SSF56801 BD65_2543 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain superfamily|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518|TIGR00118 BD65_2544 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002912|IPR004789|IPR019455|IPR027271 ACT domain|Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal|Acetolactate synthase/Transcription factor NikR, C-terminal GO:0003984|GO:0009082 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF01842|PF10369|SSF55021|TIGR00119 BD65_2545 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000843|IPR001761|IPR010982|IPR012781|IPR028082 D-fructose-responsive transcription factor|LacI-type HTH domain|Lambda repressor-like, DNA-binding domain superfamily|Periplasmic binding protein-like I|Periplasmic binding protein/LacI sugar binding domain GO:0003677|GO:0006355|GO:0009750 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF00532|PS00356|SM00354|SSF47413|SSF53822|TIGR02417 BD65_2546 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 MF_00914|PD090021|PF06610 BD65_2547 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003444|IPR020603|IPR037914|IPR038619 MraZ domain|MraZ superfamily|SpoVT-AbrB domain superfamily|Transcriptional regulator MraZ GO:0003700|GO:0006355 G3DSA:2.40.330.20|MF_01008|PD006745|PF02381|SSF89447|TIGR00242 BD65_2548 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|SSF53335|SSF81799|TIGR00006 BD65_2549 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 MF_00910|PF04999|TIGR02209 BD65_255 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR025966|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Oligopeptide transport permease C-like, N-terminal domain GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BD65_2550 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001460|IPR005311|IPR012338|IPR036138|IPR037532 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, dimerisation domain superfamily|Penicillin-binding protein, transpeptidase|Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 G3DSA:3.30.450.330|G3DSA:3.40.710.10|G3DSA:3.90.1310.30|MF_02080|PF00905|PF03717|SSF56519|SSF56601 BD65_2551 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000713|IPR004101|IPR005761|IPR013221|IPR035911|IPR036565|IPR036615 Mur ligase, C-terminal|Mur ligase, C-terminal domain superfamily|Mur ligase, N-terminal catalytic domain|Mur ligase, central|Mur-like, catalytic domain superfamily|MurE/MurF, N-terminal|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|SSF53244|SSF53623|SSF63418|TIGR01085 BD65_2552 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000713|IPR004101|IPR005863|IPR013221|IPR035911|IPR036565|IPR036615 Mur ligase, C-terminal|Mur ligase, C-terminal domain superfamily|Mur ligase, N-terminal catalytic domain|Mur ligase, central|Mur-like, catalytic domain superfamily|MurE/MurF, N-terminal|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0009058|GO:0016874|GO:0047480|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_02019|PF01225|PF02875|PF08245|SSF53244|SSF53623|SSF63418|TIGR01143 BD65_2553 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PF10555|PS01347|PS01348|TIGR00445 BD65_2554 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004101|IPR005762|IPR013221|IPR036565|IPR036615 Mur ligase, C-terminal|Mur ligase, C-terminal domain superfamily|Mur ligase, central|Mur-like, catalytic domain superfamily|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01087 BD65_2555 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001182|IPR013437|IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site|Probable peptidoglycan glycosyltransferase FtsW|Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0009252|GO:0016021|GO:0051301 MF_00913|PF01098|PS00428|TIGR02614 BD65_2556 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|SSF53756|TIGR01133 BD65_2557 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000713|IPR004101|IPR005758|IPR013221|IPR036565|IPR036615 Mur ligase, C-terminal|Mur ligase, C-terminal domain superfamily|Mur ligase, N-terminal catalytic domain|Mur ligase, central|Mur-like, catalytic domain superfamily|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01082 BD65_2558 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain superfamily GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PIRSF039102|PS00843|PS00844|SSF52440|SSF56059|TIGR01205 BD65_2559 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005548|IPR013685|IPR026579 Cell division protein FtsQ|Cell division protein FtsQ/DivIB|POTRA domain, FtsQ-type GO:0090529 G3DSA:3.10.20.310|G3DSA:3.40.50.11690|MF_00911|PF03799|PF08478 BD65_256 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BD65_2560 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0051301 G3DSA:3.30.1490.110|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|SM00842|SSF53067|TIGR01174 BD65_2561 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR020805|IPR024757|IPR036525 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain|Tubulin/FtsZ, GTPase domain superfamily GO:0003924|GO:0005525|GO:0005737 G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01134|PS01135|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 BD65_2562 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004463|IPR011334|IPR015870|IPR020568 Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00388|PF03331|SSF54211|TIGR00325 BD65_2563 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007922 Protein of unknown function DUF721/UPF0232 PF05258 BD65_2564 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009502 Secretion monitor GO:0045182 MF_01332|PD089227|PF06558|PIRSF004572 BD65_2565 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417|IPR036266|IPR036670 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA, Wing/Scaffold superfamily|SecA, preprotein cross-linking domain|SecA, preprotein cross-linking domain superfamily GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 BD65_2566 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR003561|IPR015797|IPR020084|IPR020476 Mutator MutT|NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily GO:0006281|GO:0008413|GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PR01401|PS00893|SSF55811|TIGR00586 BD65_2567 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005584|IPR013088 DNA gyrase inhibitor YacG|Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 G3DSA:3.30.50.10|MF_00649|PF03884|SSF57716 BD65_2568 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009777|IPR027462|IPR036268 Cell division protein ZapD|Z ring-associated protein D, C-terminal|ZapD domain superfamily G3DSA:1.10.3900.10|G3DSA:2.60.440.10|MF_01092|PF07072|SSF160950 BD65_2569 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|SSF52540|TIGR00152 BD65_257 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BD65_2570 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001093|IPR005993|IPR013785|IPR015875 Aldolase-type TIM barrel|GMP reductase|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase GO:0003824|GO:0003920|GO:0009117|GO:0016491|GO:0055114|GO:1902560 G3DSA:3.20.20.70|MF_00596|PF00478|PIRSF000235|PS00487|SM01240|SSF51412|TIGR01305 BD65_2571 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003004|IPR018076 GspF/PilC family|Type II secretion system F domain G3DSA:1.20.81.30|PF00482|PR00812 BD65_2572 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001482|IPR007831|IPR027417|IPR037257 General secretory system II, protein E, N-terminal|General secretory system II, protein E, N-terminal superfamily|P-loop containing nucleoside triphosphate hydrolase|Type II/IV secretion system protein G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF05157|PS00662|SSF160246|SSF52540 BD65_2573 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012902 Prokaryotic N-terminal methylation site G3DSA:3.30.700.10|PF07963|PS00409|SSF54523|TIGR02532 BD65_2574 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277|IPR036068|IPR037128 Aldolase-type TIM barrel|Nicotinate phosphoribosyltransferase-like, C-terminal|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal|Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|SSF51690|SSF54675|TIGR00078 BD65_2575 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002502|IPR036505 N-acetylmuramoyl-L-alanine amidase domain|N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|SM00644|SSF55846 BD65_2576 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031347 Protein AmpE PF17113 BD65_2577 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003343|IPR003344|IPR008964|IPR013783|IPR015217|IPR018392|IPR024519|IPR036779|IPR038177 Bacterial Ig-like, group 2|Big-1 (bacterial Ig-like domain 1) domain|Immunoglobulin-like fold|Invasin, domain 3|Invasin/intimin cell-adhesion fragments|Inverse autotransporter, beta-domain|Inverse autotransporter, beta-domain superfamily|LysM domain|LysM domain superfamily G3DSA:2.40.160.160|G3DSA:2.60.40.10|G3DSA:2.60.40.1080|G3DSA:3.10.350.10|PF01476|PF02368|PF02369|PF09134|PF11924|SM00634|SSF49373 BD65_2578 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0006865|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF00324|PIRSF006060|PS00218 BD65_2579 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000524|IPR008920|IPR011711|IPR036388|IPR036390 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BD65_258 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007376|IPR036763 Putative dsDNA mimic superfamily|dsDNA mimic, putative G3DSA:3.10.450.140|MF_00680|PD020447|PF04269|PIRSF004916|SSF102816 BD65_2580 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004660|IPR005474|IPR009014|IPR029061 2-oxo-acid dehydrogenase E1 component homodimeric type|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase, N-terminal GO:0003824|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PIRSF000156|SSF52518|SSF52922|TIGR00759 BD65_2581 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006256|IPR011053|IPR023213|IPR036625 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain superfamily|Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex|E3-binding domain superfamily|Peripheral subunit-binding domain|Single hybrid motif GO:0004742|GO:0006096|GO:0016746|GO:0045254 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|SSF47005|SSF51230|SSF52777|TIGR01348 BD65_2582 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001100|IPR004099|IPR006258|IPR012999|IPR016156|IPR023753|IPR036188 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|FAD/NAD-linked reductase, dimerisation domain superfamily|Pyridine nucleotide-disulphide oxidoreductase, class I|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0009055|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|SSF51905|SSF55424|TIGR01350 BD65_2583 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 G3DSA:3.90.176.10|PF03496|SSF56399 BD65_2584 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001030|IPR004406|IPR015928|IPR015929|IPR015931|IPR015932|IPR015933|IPR018136|IPR036008|IPR036288 Aconitase B|Aconitase B, HEAT-like domain|Aconitase B, HEAT-like domain superfamily|Aconitase B, swivel|Aconitase family, 4Fe-4S cluster binding site|Aconitase, domain 2|Aconitase, iron-sulfur domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase, swivel GO:0003994|GO:0005829|GO:0006099|GO:0051539 G3DSA:1.25.40.310|G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF06434|PF11791|PIRSF036687|PS00450|PS01244|SSF52016|SSF53732|SSF74778|TIGR00117 BD65_2585 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008249 Uncharacterised protein family UPF0231 MF_01053|PD020773|PF06062|PIRSF006287 BD65_2586 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BD65_2587 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003826|IPR009165|IPR016067 S-adenosylmethionine decarboxylase family, prokaryotic|S-adenosylmethionine decarboxylase, bacterial|S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 G3DSA:3.60.90.10|MF_00465|PF02675|PIRSF001356|SSF56276|TIGR03331 BD65_2588 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001045|IPR029063|IPR030373|IPR035246|IPR037163 Polyamine biosynthesis domain, conserved site|S-adenosyl-L-methionine-dependent methyltransferase|Spermidine synthase, tetramerisation domain|Spermidine synthase, tetramerisation domain superfamily|Spermidine/spermine synthases GO:0003824 G3DSA:2.30.140.10|G3DSA:3.40.50.150|MF_00198|PF01564|PF17284|PS01330|SSF53335|TIGR00417 BD65_2589 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019114|IPR038432 Chaperone lipoprotein, PulS/OutS-like|PulS/OutS-like superfamily G3DSA:1.20.58.1630|PD074041|PF09691 BD65_259 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001736|IPR022924|IPR025202|IPR027379|IPR030840 Cardiolipin synthase|Cardiolipin synthase A|Cardiolipin synthase N-terminal|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824|GO:0008808|GO:0016780|GO:0032049 G3DSA:3.30.870.10|MF_00190|PF13091|PF13396|SM00155|SSF56024|TIGR04265 BD65_2590 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001117|IPR002355|IPR008972|IPR011706|IPR011707 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 1|Multicopper oxidase, type 2|Multicopper oxidase, type 3 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF00394|PF07731|PF07732|PS00080|SSF49503 BD65_2591 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000836|IPR005904|IPR029057 Hypoxanthine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004422|GO:0005737|GO:0006166|GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271|TIGR01203 BD65_2592 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001765|IPR015892|IPR036874 Carbonic anhydrase|Carbonic anhydrase superfamily|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|SM00947|SSF53056 BD65_2593 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_2594 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0016020|GO:0016021|GO:0043190|GO:0055085 PF01061|PIRSF006648|PR00164 BD65_2595 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BD65_2596 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003190|IPR009010 Aspartate decarboxylase|Aspartate decarboxylase-like domain superfamily GO:0004068|GO:0006523 G3DSA:2.40.40.20|MF_00446|PD009294|PF02261|PIRSF006246|SSF50692|TIGR00223 BD65_2597 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003721|IPR004821|IPR014729 Cytidyltransferase-like domain|Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004592|GO:0009058|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|SSF52374|TIGR00018|TIGR00125 BD65_2598 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|SSF51621|TIGR00222 BD65_2599 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000550|IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily|7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|PS00794|SSF55083|TIGR01498 BD65_26 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007453|IPR025526 DsrC-like domain superfamily|Sulphur transfer protein DsrC/TusE G3DSA:1.10.10.370|G3DSA:3.30.1420.10|PF04358|PIRSF006223|SSF69721|TIGR03342 BD65_2600 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002646|IPR010206|IPR025866|IPR032828 Poly A polymerase, head domain|Poly(A) polymerase I|Polymerase A arginine-rich C-terminal domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0004652|GO:0006378|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|MF_00957|PF01743|PF12626|PF12627|SSF81301|SSF81891|TIGR01942 BD65_2601 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000924|IPR014729|IPR020058|IPR022380 Glutamyl-Q tRNA(Asp) synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006400|GO:0043039 G3DSA:3.40.50.620|MF_01428|PF00749|PR00987|SSF52374|TIGR03838 BD65_2602 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000962|IPR012784|IPR020458|IPR020460|IPR037187 DksA, N-terminal domain superfamily|RNA polymerase-binding transcription factor DksA|Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site|Zinc finger, DksA/TraR C4-type, bacteria GO:0008270 G3DSA:1.20.120.910|MF_00926|PF01258|PR00618|PS01102|SSF109635|SSF57716|TIGR02420 BD65_2603 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005224 Sugar fermentation stimulation protein G3DSA:2.40.50.580|G3DSA:3.40.1350.60|MF_00095|PF03749|TIGR00230 BD65_2604 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004175|IPR009097|IPR014051 Cyclic phosphodiesterase|Phosphoesterase, HXTX|RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 G3DSA:3.90.1140.10|MF_01940|PF02834|SSF55144|TIGR02258 BD65_2605 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001650|IPR007502|IPR010225|IPR011545|IPR013689|IPR014001|IPR027417 ATP-dependent RNA helicase HrpB, C-terminal|ATP-dependent helicase HrpB|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0004386|GO:0005524|GO:0008026 G3DSA:1.20.120.1080|G3DSA:3.40.50.300|PF00270|PF00271|PF04408|PF08482|PIRSF005496|SM00487|SM00490|SM00847|SSF52540|TIGR01970 BD65_2606 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001264|IPR001460|IPR011813|IPR012338|IPR023346|IPR028166|IPR032730|IPR036950 Beta-lactamase/transpeptidase-like|Bifunctional transglycosylase second domain|Glycosyl transferase, family 51|Lysozyme-like domain superfamily|Penicillin binding protein transglycosylase domain|Penicillin-binding protein 1B|Penicillin-binding protein, transpeptidase|Transglycosylase PBP1b, N-terminal transmembrane domain GO:0008233|GO:0008658|GO:0008955|GO:0009252|GO:0009274|GO:0046677 G3DSA:1.10.3810.10|G3DSA:1.20.5.100|G3DSA:3.30.2060.10|G3DSA:3.40.710.10|PF00905|PF00912|PF14812|PF14814|PIRSF002799|SSF53955|SSF56601|TIGR02071 BD65_2607 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004639|IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0003824|GO:0008483|GO:0030170|GO:0033014|GO:0042286 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00375|PF00202|PS00600|SSF53383|TIGR00713 BD65_2608 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|PF00654|PR00762|SSF81340 BD65_2609 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000361|IPR016092|IPR017870|IPR023063|IPR035903 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion protein ErpA|FeS cluster insertion, C-terminal, conserved site|HesB-like domain superfamily GO:0005198|GO:0051536|GO:0097428 G3DSA:2.60.300.12|MF_01380|PF01521|PS01152|SSF89360|TIGR00049 BD65_2610 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005115 Uncharacterised domain UPF0126 PF03458 BD65_2611 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002491|IPR023544 ABC transporter periplasmic binding domain|ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 G3DSA:3.40.50.1980|MF_01000|PF01497|SSF53807 BD65_2612 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000845|IPR010049|IPR035994 MTA/SAH nucleosidase|Nucleoside phosphorylase domain|Nucleoside phosphorylase superfamily GO:0003824|GO:0008782|GO:0008930|GO:0009116|GO:0009164|GO:0019509 G3DSA:3.40.50.1580|MF_01684|PF01048|SSF53167|TIGR01704 BD65_2613 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003607|IPR006261|IPR006674|IPR020779|IPR023293|IPR026875 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily|HD domain|HD/PDEase domain|Phosphohydrolase-associated domain|dNTP triphosphohydrolase|dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832|GO:0016793 G3DSA:1.10.3210.10|G3DSA:1.10.3410.10|MF_00030|PF01966|PF13286|SM00471|SSF109604|TIGR01353 BD65_2614 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001478|IPR001940|IPR009003|IPR011782|IPR036034 PDZ domain|PDZ superfamily|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.120|PF00595|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494|TIGR02037 BD65_2615 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR008207|IPR011006|IPR019247|IPR036097|IPR036641|IPR036890 CheY-like superfamily|HAMP domain|HPT domain superfamily|Histidine kinase BarA, N-terminal|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:1.20.1480.50|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01627|PF02518|PF09984|PR00344|SM00073|SM00304|SM00387|SM00388|SM00448|SSF158472|SSF47226|SSF47384|SSF52172|SSF55874 BD65_2616 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001566|IPR002792|IPR010280|IPR012340|IPR029063|IPR030390|IPR030391 (Uracil-5)-methyltransferase family|23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD|Nucleic acid-binding, OB-fold|RNA methyltransferase TrmA, active site|RNA methyltransferase TrmA, conserved site|S-adenosyl-L-methionine-dependent methyltransferase|TRAM domain GO:0003723|GO:0006396|GO:0008173 G3DSA:2.40.50.140|G3DSA:3.40.1350.30|G3DSA:3.40.50.150|MF_01010|PF01938|PF05958|PS01230|PS01231|SSF50249|SSF53335|TIGR00479 BD65_2617 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain superfamily|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0015969 G3DSA:1.10.3210.10|G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 BD65_2618 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004518|IPR011551 NTP pyrophosphohydrolase MazG|NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|SSF101386|TIGR00444 BD65_2619 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|SSF52317|SSF52540|TIGR00337 BD65_262 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR027392 Transcription factor zinc-finger PF13453 BD65_2620 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR036849 Enolase|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site|Enolase-like, C-terminal domain superfamily|Enolase-like, N-terminal GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 BD65_2621 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007197|IPR013785|IPR024924|IPR027609 7-carboxy-7-deazaguanine synthase-like|Aldolase-type TIM barrel|Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|MF_00917|PF04055|PF13394|PIRSF000370|SSF102114|TIGR04322 BD65_2622 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007115|IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD family|6-pyruvoyl tetrahydropterin synthase/QueD superfamily G3DSA:3.30.479.10|PF01242|PIRSF006113|SSF55620|TIGR03367 BD65_2623 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001094|IPR001433|IPR001709|IPR003097|IPR008254|IPR010199|IPR017938|IPR023173|IPR029039|IPR029758|IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain|Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein pyridine nucleotide cytochrome reductase|Flavoprotein-like superfamily|NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel|Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding|Sulphite reductase [NADPH] flavoprotein, alpha chain|Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0016491|GO:0019344|GO:0050660|GO:0055114 G3DSA:1.20.990.10|G3DSA:2.40.30.10|G3DSA:3.40.50.360|G3DSA:3.40.50.80|MF_01541|PF00175|PF00258|PF00667|PIRSF000207|PR00369|PR00371|SSF52218|SSF52343|SSF63380|TIGR01931 BD65_2624 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005117|IPR006066|IPR006067|IPR011786|IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/Sulfite reductase ferredoxin-like domain superfamily|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site|Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0016491|GO:0020037|GO:0050661|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.20|MF_01540|PF01077|PF03460|PR00397|PS00365|SSF55124|SSF56014|TIGR02041 BD65_2625 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002500|IPR004511|IPR011800|IPR014729 Phosphoadenosine phosphosulphate reductase|Phosphoadenosine phosphosulphate reductase CysH|Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004604|GO:0019379|GO:0055114 G3DSA:3.40.50.620|MF_00063|PF01507|PIRSF000857|SSF52402|TIGR00434|TIGR02057 BD65_2626 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031807|IPR035069 HicB-like antitoxin of toxin-antitoxin system|TTHA1013/TTHA0281-like G3DSA:3.30.160.250|PF15919|SSF143100 BD65_2628 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007484 Peptidase M28 G3DSA:3.40.630.10|PF04389|SSF53187 BD65_2629 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000878|IPR003043|IPR006366|IPR006367|IPR012409|IPR014776|IPR014777|IPR019478|IPR028281|IPR035996|IPR036291|IPR037115 NAD(P)-binding domain superfamily|Sirohaem synthase|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Sirohaem synthase, dimerisation domain superfamily|Siroheme synthase, central domain|Tetrapyrrole methylase|Tetrapyrrole methylase superfamily|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004851|GO:0006779|GO:0008168|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|MF_01646|PF00590|PF10414|PF13241|PF14824|PIRSF036426|PS00839|PS00840|SSF51735|SSF53790|SSF75615|TIGR01469|TIGR01470 BD65_263 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|SSF54909 BD65_2630 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002500|IPR011784|IPR014729 Phosphoadenosine phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold|Sulphate adenylyltransferase, small subunit GO:0003824|GO:0004781|GO:0019419 G3DSA:3.40.50.620|MF_00064|PF01507|PIRSF002936|SSF52402|TIGR02039 BD65_2631 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000795|IPR005225|IPR009000|IPR009001|IPR011779|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Sulphate adenylyltransferase, large subunit|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation protein, beta-barrel domain superfamily GO:0003924|GO:0005525|GO:0006790 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00062|PF00009|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR02034 BD65_2632 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002891|IPR027417 Adenylyl-sulfate kinase|P-loop containing nucleoside triphosphate hydrolase GO:0000103|GO:0004020|GO:0005524 G3DSA:3.40.50.300|MF_00065|PF01583|SSF52540|TIGR00455 BD65_2633 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022721 Protein of unknown function DUF3561 PD070788|PF12084 BD65_2634 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007060|IPR023081 Cell division protein FtsB|Septum formation initiator FtsL/DivIC G3DSA:1.20.5.400|MF_00599|PF04977 BD65_2635 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001228|IPR018294|IPR029044|IPR034683 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Cytidylyltransferase IspD/TarI|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0050518|GO:0070567 G3DSA:3.90.550.10|MF_00108|PF01128|PS01295|SSF53448|TIGR00453 BD65_2636 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003526|IPR020555|IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685|GO:0016114 G3DSA:3.30.1330.50|MF_00107|PF02542|PS01350|SSF69765|TIGR00151 BD65_2637 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001656|IPR020103|IPR020119 Pseudouridine synthase TruD, conserved site|Pseudouridine synthase, TruD|Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.2340.10|G3DSA:3.30.2350.20|MF_01082|PF01142|PS01268|SSF55120|TIGR00094 BD65_2638 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002828|IPR030048|IPR036523 SurE-like phosphatase/nucleotidase superfamily|Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|SSF64167|TIGR00087 BD65_2639 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|MF_00090|PF01135|PS01279|SSF53335|TIGR00080 BD65_2640 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011055|IPR016047|IPR018392|IPR036779 Duplicated hybrid motif|LysM domain|LysM domain superfamily|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|SM00257|SSF51261 BD65_2641 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR009042|IPR012761|IPR013324|IPR013325|IPR014284|IPR036388 RNA polymerase sigma factor RpoS|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4-like|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00959|PF00140|PF04539|PF04542|PF04545|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02394|TIGR02937 BD65_2642 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR017261|IPR027417|IPR036187|IPR036678 DNA mismatch repair protein MutS|DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS, core domain superfamily|DNA mismatch repair protein MutS-like, N-terminal|DNA mismatch repair protein MutS/MSH|MutS, connector domain superfamily|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PIRSF037677|PS00486|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 BD65_2643 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 BD65_2644 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007345 Polysaccharide pyruvyl transferase PF04230 BD65_2645 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469 BD65_2646 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002797|IPR029303 Polysaccharide biosynthesis protein|Polysaccharide biosynthesis protein, C-terminal domain GO:0016020 PF01943|PF14667 BD65_2648 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BD65_2649 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PF01548 BD65_265 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031854 Putative membrane protein FidL-like PF15941 BD65_2650 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010921 Trp repressor/replication initiator GO:0043565 SSF48295 BD65_2652 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008207|IPR036641 HPT domain superfamily|Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 G3DSA:1.20.120.160|PF01627|SSF47226 BD65_2653 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001638|IPR001789|IPR003594|IPR004358|IPR011006|IPR036097|IPR036890 CheY-like superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain|Solute-binding protein family 3/N-terminal domain of MltF GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.190.10|G3DSA:3.40.50.2300|PF00072|PF00497|PF02518|PR00344|SM00062|SM00387|SM00448|SSF47384|SSF52172|SSF53850|SSF55874 BD65_2654 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR001789|IPR011006|IPR016032|IPR036388 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BD65_2656 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001867|IPR016032|IPR036388 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|SSF46894 BD65_2657 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008258|IPR023346 Lysozyme-like domain superfamily|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 BD65_2659 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic PD038222 BD65_266 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001867|IPR016032|IPR036388 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|SM00862|SSF46894 BD65_2660 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013388 Type III secretion apparatus protein OrgA/MxiK GO:0009405 PF09482 BD65_2661 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003282|IPR006182 Secretory protein YscJ/FliF|Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 G3DSA:3.30.300.30|G3DSA:3.30.70.1530|PF01514|PR01338|TIGR02544 BD65_2662 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 SSF140129 BD65_2663 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021123|IPR037203 Type III secretion, needle-protein-like|Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 G3DSA:1.20.58.90|PF09392|SSF140129 BD65_2664 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019029 Type III secretion system, PrgH/EprH-like GO:0016021 G3DSA:3.30.70.1770|PF09480 BD65_2665 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR018060|IPR020449 DNA binding HTH domain, AraC-type|Homeobox-like domain superfamily|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|SM00342|SSF46689 BD65_2666 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003522|IPR004846|IPR005644|IPR038591 NolW-like|NolW-like superfamily|Type II/III secretion system|Type III secretion system outer membrane pore YscC/HrcC GO:0009306 G3DSA:3.30.1370.120|G3DSA:3.55.50.30|PF00263|PF03958|PR01337|TIGR02516 BD65_2667 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010812|IPR013401 Hypersensitivity response secretion-like, HrpJ|Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009405|GO:0009986|GO:0019867|GO:0030254|GO:0046903|GO:0050709 G3DSA:1.10.150.630|PF07201|SSF140591|TIGR02568 BD65_2668 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001712|IPR006302|IPR025505 FHIPEP conserved site|Type III secretion protein HrcV|Type III secretion system FHIPEP GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:1.10.490.80|G3DSA:1.10.8.540|G3DSA:3.40.30.60|G3DSA:3.40.5.40|PF00771|PIRSF005419|PR00949|PS00994|TIGR01399 BD65_2669 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003065 Surface presentation of antigens protein SpaK G3DSA:3.30.1460.10|PF03519|PR01305|SSF69635 BD65_2670 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000194|IPR003593|IPR005714|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, type III secretion system, FliI/YscN|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 G3DSA:3.40.50.12240|PF00006|SM00382|SSF52540|TIGR01026 BD65_2673 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001172|IPR001543|IPR036429 Flagellar motor switch FliN/Type III secretion HrcQb|SpoA-like superfamily|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|SSF101801 BD65_2674 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005773|IPR005838 Type III secretion system inner membrane P protein|Yop virulence translocation protein R GO:0009306|GO:0015031|GO:0016020|GO:0016021 PF00813|PR01302|PS01060|PS01061|TIGR01102 BD65_2675 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002191|IPR006306 Bacterial export protein family 3|Type III secretion protein HrpO GO:0009306|GO:0016020|GO:0016021 PF01313|PIRSF004669|PR00952|TIGR01403 BD65_2676 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002010|IPR006304 Type III secretion protein SpaR/YscT|Type III secretion system inner membrane R protein GO:0006605|GO:0016020|GO:0016021 PF01311|PR00953|TIGR01401 BD65_2677 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006135|IPR006307|IPR029025 Type III exporter system, secretion apparatus protein BsaZ|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0016020|GO:0016021 G3DSA:3.40.1690.10|PF01312|PR00950|SSF160544|TIGR01404 BD65_2678 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005415|IPR011716|IPR011990|IPR016379 Tetratricopeptide TPR-3|Tetratricopeptide-like helical domain superfamily|Type III secretion system, low calcium response, chaperone LcrH/SycD|Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup GO:0005515 G3DSA:1.25.40.10|PF07720|PIRSF003165|PR01595|SSF48452|TIGR02552 BD65_2679 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006972 Secretion system effector C, SseC-like GO:0009405 PF04888 BD65_268 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001829|IPR008962|IPR013783|IPR016147|IPR016148|IPR036316 Immunoglobulin-like fold|PapD-like superfamily|Pili assembly chaperone, C-terminal|Pili assembly chaperone, C-terminal domain superfamily|Pili assembly chaperone, N-terminal|Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077|GO:0071555 G3DSA:2.60.40.10|PF00345|PF02753|PR00969|SSF49354|SSF49584 BD65_2680 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005427 Salmonella/Shigella invasin protein C GO:0009405 PF09599 BD65_2681 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009483|IPR036708 BipD-like superfamily|Invasion plasmid antigen IpaD GO:0009405 G3DSA:1.20.1710.10|PF06511|SSF140693 BD65_2683 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009081|IPR036736 ACP-like superfamily|Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 BD65_2684 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 G3DSA:3.30.1460.10|PF05932|SSF69635 BD65_2685 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000242|IPR003595|IPR029021 PTP type protein phosphatase|Protein-tyrosine phosphatase, catalytic|Protein-tyrosine phosphatase-like GO:0004725|GO:0006470 G3DSA:3.90.190.10|PF00102|SM00194|SM00404|SSF52799 BD65_2686 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005625 PepSY-associated TM protein PF03929 BD65_2687 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003610|IPR004302|IPR014756|IPR036573 Carbohydrate-binding module family 5/12|Carbohydrate-binding module superfamily 5/12|Cellulose/chitin-binding protein, N-terminal|Immunoglobulin E-set GO:0004553|GO:0005576|GO:0005975|GO:0030246 G3DSA:2.10.10.20|G3DSA:2.60.40.2550|G3DSA:2.70.50.50|G3DSA:3.30.70.2150|PF03067|SM00495|SSF51055|SSF81296 BD65_2688 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019114|IPR038432 Chaperone lipoprotein, PulS/OutS-like|PulS/OutS-like superfamily G3DSA:1.20.58.1630|PF09691 BD65_2689 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000045|IPR010627|IPR014032 Peptidase A24A, N-terminal|Peptidase A24A, prepilin type IV, bacterial|Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 G3DSA:1.20.120.1220|PF01478|PF06750|PR00864 BD65_269 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000015|IPR018030|IPR025885|IPR025949|IPR037224 Fimbrial membrane usher, conserved site|Outer membrane usher protein|PapC, N-terminal domain|PapC, N-terminal domain superfamily|PapC-like, C-terminal domain GO:0005515|GO:0009297|GO:0015473|GO:0016020 G3DSA:2.60.40.2070|G3DSA:2.60.40.2610|G3DSA:2.60.40.3110|G3DSA:3.10.20.410|PF00577|PF13953|PF13954|PS01151|SSF141729 BD65_2690 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007690|IPR023229 Type II secretion system protein M, periplasmic domain superfamily|Type II secretion system, protein M GO:0009306 G3DSA:3.30.1360.100|PF04612|SSF103054 BD65_2691 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007812|IPR024230|IPR025691 GspL periplasmic domain|GspL, cytoplasmic actin-ATPase-like domain|Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 G3DSA:3.30.420.370|G3DSA:3.30.420.380|PF05134|PF12693|PIRSF015761|SSF53067|TIGR01709 BD65_2692 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005628|IPR038072 General secretion pathway protein K|GspK, central domain superfamily GO:0009306|GO:0016021 G3DSA:1.10.40.60|G3DSA:3.30.1300.30|PF03934|PIRSF002786|SSF158544|SSF54523 BD65_2693 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 G3DSA:2.10.70.20|G3DSA:3.10.610.10|PF11612|SSF54523|TIGR01711 BD65_2694 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003413|IPR010052|IPR012902 Prokaryotic N-terminal methylation site|Type II secretion system protein I|Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.1300.30|PF02501|PF07963|PS00409|SSF54523|TIGR01707|TIGR02532 BD65_2695 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002416|IPR012902|IPR022346 General secretion pathway, GspH|Prokaryotic N-terminal methylation site|Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 G3DSA:3.55.40.10|PF12019|PR00885|SSF54523|TIGR01708|TIGR02532 BD65_2696 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000983|IPR010054|IPR012902|IPR013545 Bacterial general secretion pathway protein G-type pilin|General secretion pathway protein G|Prokaryotic N-terminal methylation site|Type II secretion system protein G GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF07963|PF08334|PR00813|PS00409|SSF54523|TIGR01710|TIGR02532 BD65_2697 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001992|IPR003004|IPR011850|IPR018076 General secretion pathway protein F|GspF/PilC family|Type II secretion system F domain|Type II secretion system conserved site GO:0008565|GO:0009306|GO:0015627|GO:0015628|GO:0016020 G3DSA:1.20.81.30|PF00482|PR00812|PS00874|TIGR02120 BD65_2698 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001482|IPR003593|IPR013369|IPR027417|IPR037257 AAA+ ATPase domain|General secretory system II, protein E, N-terminal superfamily|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system GspE|Type II/IV secretion system protein GO:0005524|GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.300.160|G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PS00662|SM00382|SSF160246|SSF52540|TIGR02533 BD65_2699 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001775|IPR004846|IPR005644|IPR013356|IPR038591 GspD/PilQ family|NolW-like|NolW-like superfamily|Type II secretion system GspD|Type II/III secretion system GO:0008565|GO:0009306|GO:0015627|GO:0015628|GO:0019867 G3DSA:3.30.1370.120|PF00263|PF03958|PR00811|TIGR02517 BD65_270 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008394|IPR008966 Adhesion domain superfamily|Enterobacteria AfaD invasin G3DSA:2.60.40.1950|PF05775|SSF49401 BD65_2700 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR024961 Type II secretion system protein C, N-terminal G3DSA:2.30.30.830|PF11356 BD65_2701 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001867|IPR016032|IPR036388 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|SM00862|SSF46894 BD65_2702 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|SSF81342 BD65_2705 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018535 Domain of unknown function DUF1996 PF09362 BD65_2706 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004646|IPR004647|IPR011167|IPR020557|IPR036660 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily|Fumarate lyase, conserved site|Iron-dependent fumarate hydratase GO:0003824|GO:0004333|GO:0006091|GO:0016829|GO:0016836 G3DSA:3.20.130.10|PF05681|PF05683|PIRSF001394|PS00163|SSF117457|TIGR00722|TIGR00723 BD65_2707 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BD65_2708 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008136|IPR036653 CinA, C-terminal|CinA-like, C-terminal G3DSA:3.90.950.20|PF02464|SSF142433|TIGR00199 BD65_2709 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|SM00382|SSF52540|SSF54752|TIGR02012 BD65_2710 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003783|IPR036388 Regulatory protein RecX|Winged helix-like DNA-binding domain superfamily GO:0006282 G3DSA:1.10.10.10|MF_01114|PF02631 BD65_2711 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily|Translation protein, beta-barrel domain superfamily GO:0000166|GO:0003676|GO:0004812|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0043039 G3DSA:2.40.30.130|G3DSA:3.10.310.40|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 BD65_2712 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003751|IPR036107 Carbon storage regulator superfamily|Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 G3DSA:3.30.70.1680|MF_00167|PD009007|PF02599|SSF117130|TIGR00202 BD65_2717 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006439|IPR010976|IPR023198|IPR023214|IPR036412 Beta-phosphoglucomutase hydrolase|HAD hydrolase, subfamily IA|HAD superfamily|HAD-like superfamily|Phosphoglycolate phosphatase-like, domain 2 GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01509|TIGR02009 BD65_2718 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020143|IPR032816 SNARE associated Golgi protein|Uncharacterised protein family, RP436 PD085709|PF09335 BD65_2719 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006334|IPR007370|IPR014746 Glutamate--cysteine ligase|Glutamate--cysteine ligase, monofunctional|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004357|GO:0006750 G3DSA:3.30.590.20|MF_00578|PF04262|SSF55931|TIGR01434 BD65_272 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal GO:0003677|GO:0006355 G3DSA:3.40.50.12740|PF00196|PR00038|PS00622|SM00421|SSF46894 BD65_2720 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003815|IPR011249|IPR037005 Metalloenzyme, LuxS/M16 peptidase-like|S-ribosylhomocysteinase (LuxS)|S-ribosylhomocysteinase (LuxS) superfamily GO:0003824|GO:0005506|GO:0009372|GO:0043768|GO:0046872 G3DSA:3.30.1360.80|MF_00091|PD013172|PF02664|PIRSF006160|PR01487|SSF63411 BD65_2721 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002550|IPR005170|IPR016169|IPR036318 CNNM, transmembrane domain|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|Transporter-associated domain GO:0050660 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF01595|PF03471|SM01091|SSF54631|SSF56176 BD65_2722 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PF01578 BD65_2723 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417|IPR036891 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, M-domain superfamily|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 BD65_2724 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000307|IPR020592|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain superfamily|Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|PS00732|SSF54565|TIGR00002 BD65_2725 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002676|IPR009000|IPR011033|IPR011961|IPR027275|IPR036976 16S rRNA processing protein RimM|PRC-barrel domain|PRC-barrel-like superfamily|RimM, N-terminal|RimM, N-terminal domain superfamily|Translation protein, beta-barrel domain superfamily GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|PF05239|SSF50346|SSF50447|TIGR02273 BD65_2726 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|SSF75217|TIGR00088 BD65_2727 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001857|IPR008991|IPR018257|IPR038657 Ribosomal protein L19|Ribosomal protein L19 superfamily|Ribosomal protein L19, conserved site|Translation protein SH3-like domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.790|MF_00402|PF01245|PIRSF002191|PR00061|PS01015|SSF50104|TIGR01024 BD65_2728 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007433 Protein of unknown function DUF481 PF04338 BD65_2729 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 PF03605|PIRSF004539|TIGR00770 BD65_273 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003538|IPR006260|IPR037682 Gram-negative bacterial TonB protein|TonB, C-terminal|TonB/TolA, C-terminal GO:0015343|GO:0015891|GO:0030288|GO:0031992|GO:0055085 G3DSA:3.30.2420.10|PF03544|PF16031|PR01374|SSF74653|TIGR01352 BD65_2730 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR007492|IPR011006 CheY-like superfamily|LytTR DNA-binding domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677 G3DSA:2.40.50.1020|G3DSA:3.40.50.2300|PF00072|PF04397|SM00448|SM00850|SSF52172 BD65_2731 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PIRSF001361|SSF51569|TIGR00034 BD65_2732 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002701|IPR003099|IPR008244|IPR008927|IPR011277|IPR036263|IPR036291|IPR036979 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|Bifunctional chorismate mutase/prephenate dehydrogenase T-protein|Chorismate mutase II, prokaryotic-type|Chorismate mutase domain superfamily|Chorismate mutase type II superfamily|Chorismate mutase, T-protein|NAD(P)-binding domain superfamily|Prephenate dehydrogenase GO:0004106|GO:0004665|GO:0005737|GO:0006571|GO:0008977|GO:0046417|GO:0055114 G3DSA:1.10.3660.10|G3DSA:1.20.59.10|G3DSA:3.40.50.720|PF01817|PF02153|PIRSF001499|SM00830|SSF48179|SSF48600|SSF51735|TIGR01799 BD65_2733 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001086|IPR002701|IPR008242|IPR010952|IPR018528|IPR036263|IPR036979 Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Chorismate mutase II, prokaryotic-type|Chorismate mutase domain superfamily|Chorismate mutase type II superfamily|Chorismate mutase, gammaproteobacteria|Prephenate dehydratase|Prephenate dehydratase, conserved site GO:0004106|GO:0004664|GO:0005737|GO:0009094|GO:0046417 G3DSA:1.20.59.10|G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PF01817|PIRSF001500|PS00857|PS00858|SM00830|SSF48600|SSF53850|SSF55021|TIGR01797 BD65_2734 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003489|IPR036567 Ribosome hibernation promoting factor/RaiA|Ribosome hibernation promotion factor-like GO:0044238 G3DSA:3.30.160.100|PF02482|SSF69754|TIGR00741 BD65_2735 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990|IPR017689|IPR039565 Outer membrane lipoprotein BamD-like|Outer membrane protein assembly factor BamD|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|MF_00922|PF13525|SSF48452|TIGR03302 BD65_2736 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103|IPR036986 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain superfamily|RNA-binding S4 domain|RNA-binding S4 domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|PF00849|PF01479|PS01129|SM00363|SSF55120|SSF55174|TIGR00005 BD65_2737 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003730|IPR011324|IPR038371 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase|Multi-copper polyphenol oxidoreductase superfamily G3DSA:3.60.140.10|PF02578|SSF64438|TIGR00726 BD65_2738 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299|IPR036628 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|Clp, N-terminal domain superfamily|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0019538|GO:0042026 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 BD65_274 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006683|IPR029069 HotDog domain superfamily|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 BD65_2745 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR036397 Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 BD65_2746 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527|SSF46689 BD65_2747 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005135|IPR036691 Endonuclease/exonuclease/phosphatase|Endonuclease/exonuclease/phosphatase superfamily G3DSA:3.60.10.10|PF03372|SSF56219 BD65_2748 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000189|IPR008258|IPR018392|IPR023346|IPR036779 LysM domain|LysM domain superfamily|Lysozyme-like domain superfamily|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|G3DSA:3.10.350.10|PF01464|PF01476|PS00922|SM00257|SSF53955|SSF54106 BD65_2749 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001279|IPR017782|IPR032282|IPR036866 Hydroxyacylglutathione hydrolase|Hydroxyacylglutathione hydrolase, C-terminal domain|Metallo-beta-lactamase|Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GO:0004416|GO:0019243 G3DSA:3.60.15.10|MF_01374|PF00753|PF16123|PIRSF005457|SM00849|SSF56281|TIGR03413 BD65_275 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006008 Intracellular septation protein A GO:0016021 MF_00189|PF04279|TIGR00997 BD65_2750 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BD65_2751 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002156|IPR012337|IPR022892|IPR036397 Ribonuclease H domain|Ribonuclease H superfamily|Ribonuclease H-like superfamily|Ribonuclease HI GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00042|PF00075|SSF53098 BD65_2752 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006054|IPR006309|IPR012337|IPR013520|IPR036397 DNA polymerase 3, epsilon subunit|DNA polymerase III epsilon subunit, exonuclease domain|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0003677|GO:0003887|GO:0006260 G3DSA:3.20.20.140|G3DSA:3.30.420.10|PF00929|SM00479|SSF53098|TIGR00573|TIGR01406 BD65_2754 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR015396|IPR036250|IPR037069 Acyl-CoA dehydrogenase, C-termina, bacterial type|Acyl-CoA dehydrogenase-like, C-terminal|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily|Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0016627|GO:0033539|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF09317|SSF47203|SSF56645 BD65_2755 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001347|IPR004515 Phosphoheptose isomerase|Sugar isomerase (SIS) GO:0005737|GO:0008968|GO:0097367|GO:1901135 G3DSA:3.40.50.10490|MF_00067|PF13580|SSF53697|TIGR00441 BD65_2756 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005490|IPR038063 L,D-transpeptidase catalytic domain|L,D-transpeptidase catalytic domain-like GO:0016740 PF03734|SSF141523 BD65_2757 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR026869|IPR029055 Nucleophile aminohydrolases, N-terminal|Putative glutamine amidotransferase type 2 G3DSA:3.60.20.10|PF13230|SSF56235 BD65_2758 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008703|IPR022615 Na(+)-translocating NADH-quinone reductase subunit A|Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0006814|GO:0016655|GO:0055114 MF_00425|PF05896|PF11973|TIGR01936 BD65_2759 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004338|IPR010966 Ion-translocating oxidoreductase NqrB/RnfD|Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016020|GO:0016021|GO:0016655|GO:0022904|GO:0055085 MF_00426|PF03116|PIRSF016055|TIGR01937 BD65_276 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002645|IPR011547|IPR036513 SLC26A/SulP transporter domain|STAS domain|STAS domain superfamily GO:0008272|GO:0015116|GO:0016021 G3DSA:3.30.750.24|PF00916|PF01740|SSF52091 BD65_2760 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007329|IPR010204 FMN-binding|Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016020|GO:0016021|GO:0016655 MF_00427|PF04205|PIRSF009437|SM00900|TIGR01938 BD65_2761 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003667|IPR011292 Na(+)-translocating NADH-quinone reductase subunit D|NqrDE/RnfAE GO:0016020|GO:0016655|GO:0055114 MF_00428|PF02508|PIRSF006102|TIGR01939 BD65_2762 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003667|IPR010967 Na(+)-translocating NADH-quinone reductase subunit E|NqrDE/RnfAE GO:0009276|GO:0016020|GO:0016021|GO:0016655|GO:0022904|GO:0055114 MF_00429|PF02508|PIRSF006102|TIGR01940 BD65_2763 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001041|IPR001433|IPR008333|IPR010205|IPR012675|IPR017938|IPR036010|IPR039261 2Fe-2S ferredoxin-like superfamily|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain superfamily|Ferredoxin-NADP reductase (FNR), nucleotide-binding domain|Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain|Na(+)-translocating NADH-quinone reductase subunit F|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0006814|GO:0009055|GO:0016021|GO:0016491|GO:0016655|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|MF_00430|PF00111|PF00175|PF00970|PIRSF000044|SSF52343|SSF54292|SSF63380|TIGR01941 BD65_2764 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003374|IPR024932 ApbE-like superfamily|Flavin transferase ApbE GO:0017013 G3DSA:3.10.520.20|PF02424|PIRSF006268|SSF143631 BD65_2765 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007495 (Na+)-NQR maturation factor NqrM PF04400 BD65_2766 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF03009|SSF51695 BD65_2767 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001126|IPR017961|IPR022880|IPR024728|IPR036775 DNA polymerase IV|DNA polymerase type-Y, HhH motif|DNA polymerase, Y-family, little finger domain|DNA polymerase, Y-family, little finger domain superfamily|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:2.30.40.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11798|PF11799|SSF100879|SSF56672 BD65_2768 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001160|IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20C, Xaa-His dipeptidase GO:0006508|GO:0016787 G3DSA:3.40.630.10|PF01546|PF07687|PIRSF016599|PR00934|SSF53187|TIGR01893 BD65_2769 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000836|IPR023747|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like|Xanthine-guanine phosphoribosyltransferase GO:0000310|GO:0009116 G3DSA:3.40.50.2020|MF_01903|PF00156|SSF53271 BD65_277 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009627 Uncharacterised protein family UPF0259 MF_01067|PF06790 BD65_2770 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010520|IPR029058 Alpha/Beta hydrolase fold|UPF0255 family G3DSA:3.40.50.1820|MF_01063|PF06500|SSF53474 BD65_2771 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009986|IPR038208 Sigma factor-binding protein Crl|Sigma factor-binding protein Crl superfamily GO:0045893 G3DSA:3.30.310.230|MF_01178|PF07417 BD65_2772 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797|IPR036393|IPR036974 Acetylglutamate kinase-like superfamily|Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA domain|PUA domain superfamily|PUA-like superfamily GO:0003723|GO:0004349|GO:0005737|GO:0006561 G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|SM00359|SSF53633|SSF88697|TIGR01027 BD65_2773 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163|IPR020593 Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|SSF53720|TIGR00407 BD65_2774 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009875|IPR009926|IPR012349|IPR023787 FMN-binding split barrel|PilZ domain|Type III secretion system flagellar brake protein YcgR|Type III secretion system flagellar brake protein YcgR, N-terminal GO:0035438|GO:0048037|GO:0071945 G3DSA:2.30.110.10|G3DSA:2.40.10.220|MF_01457|PF07238|PF07317 BD65_2775 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SSF90123 BD65_2776 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF00583|SSF55729 BD65_2777 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010854|IPR025543|IPR036275 Dodecin-like|Domain of unknown function DUF1471|YdgH-like superfamily G3DSA:3.30.1660.10|PF07338|SSF159871 BD65_2778 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002491 ABC transporter periplasmic binding domain G3DSA:3.40.50.1980|PF01497|SSF53807 BD65_2779 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000531|IPR010105|IPR012910|IPR036942|IPR037066 TonB-dependent receptor, plug domain|TonB-dependent receptor, plug domain superfamily|TonB-dependent receptor-like, beta-barrel|TonB-dependent receptor-like, beta-barrel domain superfamily|TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01783 BD65_278 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692 BD65_2780 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000623|IPR023000|IPR027417|IPR027544|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase 2|Shikimate kinase, conserved site|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase GO:0004765|GO:0009073 G3DSA:3.40.50.300|MF_00109|MF_01269|PF01202|PR01100|PS01128|SSF52540 BD65_2781 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005471|IPR014757|IPR029016|IPR036388|IPR036390 GAF-like domain superfamily|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BD65_2782 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 PF03169 BD65_2783 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009561 Protein of unknown function DUF1177 PF06675 BD65_2784 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010843 Uncharacterised protein family AroM PD037589|PF07302 BD65_2785 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009664|IPR011051|IPR014710 Pyrimidine/purine nucleoside phosphorylase|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold G3DSA:2.60.120.10|MF_01537|PF06865|SSF51182 BD65_2786 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007476 Putative exonuclease, RdgC GO:0006310 MF_00194|PF04381 BD65_2787 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000600 ROK family G3DSA:3.30.420.40|PF00480|PS01125|SSF53067 BD65_2788 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR027417|IPR038729 P-loop containing nucleoside triphosphate hydrolase|Rad50/SbcC-type AAA domain G3DSA:3.40.50.300|PF13476|PF13558|SSF52540 BD65_2789 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004593|IPR004843|IPR026843|IPR029052 Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like|Nuclease SbcCD subunit D|Nuclease SbcCD subunit D, C-terminal domain GO:0004519|GO:0006259|GO:0008408|GO:0016787 G3DSA:3.30.160.720|G3DSA:3.60.21.10|PF00149|PF12320|SSF56300|TIGR00619 BD65_279 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000758|IPR005618|IPR011250 Outer membrane protein, OmpW|Outer membrane protein/outer membrane enzyme PagP, beta-barrel|Virulence-related outer membrane protein GO:0009279|GO:0019867 G3DSA:2.40.160.20|PF03922|PS00695|SSF56925 BD65_2790 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001867|IPR011006|IPR011879|IPR016032|IPR036388 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000156|GO:0000160|GO:0003677|GO:0006355|GO:0006817 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172|TIGR02154 BD65_2791 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013767|IPR014310|IPR021766|IPR035965|IPR036097|IPR036890 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|PAS domain|PAS domain superfamily|PAS fold|Phosphate regulon sensor protein PhoR|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase, phosphate regulon sensor PhoR|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004721|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF11808|PR00344|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229|TIGR02966 BD65_2792 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011862|IPR024370 PBP domain|Phosphate binding protein GO:0042301 G3DSA:3.40.190.10|PF12849|SSF53850|TIGR02136 BD65_2793 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PF05525|TIGR00796 BD65_2794 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0006865|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF00324|PIRSF006060|PS00218 BD65_2795 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004185|IPR006047|IPR013780|IPR017069|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, family 13, N-terminal Ig-like domain|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Maltodextrin glucosidase GO:0003824|GO:0004553|GO:0004558|GO:0005737|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02903|PIRSF036918|SM00642|SSF51011|SSF51445 BD65_2796 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR036291 NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SSF51735 BD65_2797 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000866|IPR019479|IPR024706|IPR036249 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like superfamily GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|SSF52833 BD65_2798 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007431|IPR023491 Acyl carrier protein phosphodiesterase|Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 MF_01950|PF04336|PIRSF011489 BD65_2799 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003699|IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA|S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|SSF111337|TIGR00113 BD65_280 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|SM00749 BD65_2800 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002616|IPR004803|IPR036511 Queuine tRNA-ribosyltransferase-like|tRNA-guanine transglycosylase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0016763|GO:0101030 G3DSA:3.20.20.105|MF_00168|PF01702|SSF51713|TIGR00430|TIGR00449 BD65_2801 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|SM01323|TIGR00739 BD65_2802 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005791|IPR022645|IPR022646|IPR022813|IPR027398 Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|SecD export protein N-terminal TM domain GO:0006886|GO:0015450 G3DSA:3.30.1360.200|G3DSA:3.30.70.3400|MF_01463_B|PF02355|PF07549|PF13721|SSF82866|TIGR00916|TIGR01129 BD65_2803 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005665|IPR022645|IPR022646|IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|SSF82866|TIGR00916|TIGR00966 BD65_2804 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003796|IPR005144 ATP-cone domain|Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MF_00440|PF03477|TIGR00244 BD65_2805 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002125|IPR002734|IPR004794|IPR011549|IPR016192|IPR016193|IPR024072 APOBEC/CMP deaminase, zinc-binding|Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminase domain|Cytidine deaminase-like|Dihydrofolate reductase-like domain superfamily|Riboflavin biosynthesis protein RibD|Riboflavin-specific deaminase, C-terminal GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0016787|GO:0050661|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PS00903|SSF53597|SSF53927|TIGR00227|TIGR00326 BD65_2806 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002180|IPR034964|IPR036467 Lumazine synthase|Lumazine/riboflavin synthase|Lumazine/riboflavin synthase superfamily GO:0000906|GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|SSF52121|TIGR00114 BD65_2807 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006027|IPR011605|IPR035926 NusB antitermination factor|NusB-like superfamily|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|SSF48013|TIGR01951 BD65_2808 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006283|IPR010918|IPR016188|IPR036676|IPR036921 PurM-like, C-terminal domain|PurM-like, C-terminal domain superfamily|PurM-like, N-terminal domain|PurM-like, N-terminal domain superfamily|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_02128|PF00586|PF02769|PIRSF005303|SSF55326|SSF56042|TIGR01379 BD65_2809 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007686|IPR026037|IPR036681 PgpA-like superfamily|Phosphatidylglycerophosphatase A|YutG/PgpA domain GO:0006629|GO:0008962 PF04608|PIRSF006162|SSF101307 BD65_281 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002028|IPR011060|IPR013785|IPR018204 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain|Tryptophan synthase, alpha chain, active site GO:0003824|GO:0004834|GO:0006568 G3DSA:3.20.20.70|MF_00131|PF00290|PS00167|SSF51366|TIGR00262 BD65_2810 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR020826|IPR029061|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PS00802|SM00861|SSF52518|SSF52922|TIGR00204 BD65_2811 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000092|IPR008949|IPR033749 Isoprenoid synthase domain superfamily|Polyprenyl synthetase|Polyprenyl synthetase, conserved site GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 BD65_2812 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003761|IPR037004 Exonuclease VII, small subunit|Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|MF_00337|PD028235|PF02609|PIRSF006488|SSF116842|TIGR01280 BD65_2813 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003720|IPR004114|IPR014729|IPR020536|IPR026340|IPR036873 Rhodanese-like domain superfamily|Rossmann-like alpha/beta/alpha sandwich fold|THUMP domain|Thiazole biosynthesis domain|Thil, AANH domain|tRNA sulfurtransferase ThiI GO:0003723|GO:0004810|GO:0005737|GO:0016783|GO:0034227|GO:0052837 G3DSA:3.30.2130.30|G3DSA:3.40.250.10|G3DSA:3.40.50.620|MF_00021|PF02568|PF02926|SM00981|SSF143437|SSF52402|SSF52821|TIGR00342|TIGR04271 BD65_2814 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR002078|IPR002197|IPR009057|IPR011006|IPR025944|IPR027417 CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeobox-like domain superfamily|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF02954|PF14532|PS00688|SM00448|SSF46689|SSF52172|SSF52540 BD65_2815 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR017116|IPR036097|IPR036890 HAMP domain|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, PgtB|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.1480.50|G3DSA:3.30.565.10|PF00512|PF02518|PIRSF037119|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 BD65_2816 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:3.40.190.10|PF13343|SSF53850 BD65_2817 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000849|IPR011701|IPR021159|IPR036259 Glycerate/sugar phosphate transporter, conserved site|MFS transporter superfamily|Major facilitator superfamily|Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF07690|PIRSF002808|PS00942|SSF103473|TIGR00881 BD65_2818 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002818|IPR006287|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|Protein/nucleic acid deglycase DJ-1 G3DSA:3.40.50.880|PF01965|SSF52317|TIGR01383 BD65_2819 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR036291 6-phosphogluconate dehydrogenase, domain 2|6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain superfamily GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|SSF48179|SSF51735|TIGR00745 BD65_282 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001926|IPR006653|IPR006654|IPR023026|IPR036052 Pyridoxal-phosphate dependent enzyme|Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site GO:0000162|GO:0004834|GO:0006568 G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PS00168|SSF53686|TIGR00263 BD65_2820 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007551|IPR035570|IPR035571|IPR036183 Protein of unknown function DUF520|UPF0234, N-terminal|UPF0234-like, C-terminal|YajQ-like superfamily G3DSA:3.30.70.860|G3DSA:3.30.70.990|MF_00632|PF04461|SSF89963 BD65_2821 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|G3DSA:3.30.70.100|PF07690|SSF103473 BD65_2822 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000537|IPR006369|IPR030470 Protohaem IX farnesyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0008495|GO:0016021|GO:0016765|GO:0048034 G3DSA:1.10.357.140|MF_00154|PF01040|PS00943|TIGR01473 BD65_2823 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005171|IPR014210 Cytochrome C oxidase subunit IV, prokaryotes|Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 PF03626|TIGR02847 BD65_2824 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000298|IPR013833|IPR014206|IPR035973 Cytochrome c oxidase subunit III-like|Cytochrome c oxidase subunit III-like superfamily|Cytochrome c oxidase, subunit III, 4-helical bundle|Cytochrome o ubiquinol oxidase, subunit III GO:0004129|GO:0005886|GO:0008827|GO:0015002|GO:0016020|GO:0019646|GO:0022904 G3DSA:1.20.120.80|PF00510|SSF81452|TIGR02842 BD65_2825 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000883|IPR014207|IPR023615|IPR036927 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I, copper-binding site|Cytochrome c oxidase-like, subunit I superfamily|Cytochrome o ubiquinol oxidase, subunit I GO:0004129|GO:0009060|GO:0016021|GO:0016682|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|SSF81442|TIGR02843 BD65_2826 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002429|IPR006333|IPR008972|IPR010514|IPR036257 COX aromatic rich motif|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain superfamily|Cytochrome c oxidase subunit II-like C-terminal|Cytochrome o ubiquinol oxidase subunit II GO:0004129|GO:0005507|GO:0008827|GO:0016020|GO:0016021|GO:0016682|GO:0022900|GO:0055114 G3DSA:1.10.287.90|G3DSA:2.60.40.420|PF00116|PF06481|PIRSF000292|SSF49503|SSF81464|TIGR01433 BD65_2827 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018013|IPR036777 Nucleoside-specific channel-forming protein, Tsx-like|Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 PF03502|SSF111364 BD65_2828 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00901 BD65_2829 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005619 Uncharacterised protein family, YajG PF03923 BD65_283 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001240|IPR001468|IPR011060|IPR013785|IPR013798 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|N-(5'phosphoribosyl) anthranilate isomerase (PRAI)|Ribulose-phosphate binding barrel GO:0003824|GO:0004425|GO:0004640|GO:0006568 G3DSA:3.20.20.70|MF_00134_B|MF_00135|PF00218|PF00697|PS00614|SSF51366 BD65_2830 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002634|IPR036065 BolA protein|BolA-like superfamily G3DSA:3.30.300.90|PF01722|PIRSF003113|SSF82657 BD65_2831 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001179|IPR005215|IPR008880|IPR008881|IPR027304|IPR036611|IPR037041 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Trigger factor|Trigger factor ribosome-binding domain superfamily|Trigger factor, C-terminal|Trigger factor, C-terminal domain superfamily|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain superfamily GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.10.50.40|G3DSA:3.30.70.1050|MF_00303|PF00254|PF05697|PF05698|PIRSF003095|SSF102735|SSF109998|SSF54534|TIGR00115 BD65_2832 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001907|IPR018215|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, Ser active site|ClpP, histidine active site|ClpP/crotonase-like domain superfamily GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00381|PS00382|SSF52096|TIGR00493 BD65_2833 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417|IPR038366 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type|Zinc finger, ClpX C4-type superfamily GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.30.50.30|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 BD65_2834 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027417|IPR027543 AAA+ ATPase domain|ATPase, AAA-type, core|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|Lon, substrate-binding domain|P-loop containing nucleoside triphosphate hydrolase|PUA-like superfamily|Peptidase S16, Lon proteolytic domain|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 G3DSA:1.10.8.60|G3DSA:1.20.58.1480|G3DSA:2.30.130.40|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 BD65_2835 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|SM00411|SSF47729 BD65_2836 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000297|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Trigger factor/SurA domain superfamily GO:0003755 G3DSA:3.10.50.40|PF13145|PF13624|SSF109998|SSF54534 BD65_2837 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004509|IPR010994 Competence protein ComEA, helix-hairpin-helix domain|RuvA domain 2-like G3DSA:1.10.150.280|PF12836|SSF47781|TIGR00426 BD65_2838 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006684|IPR029069 Acyl-CoA thioester hydrolase YbgC/YbaW family|HotDog domain superfamily GO:0016787 G3DSA:3.10.129.10|PF13279|PIRSF003230|SSF54637|TIGR00051 BD65_2839 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014729|IPR018317 Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|SSF52402|TIGR00364 BD65_284 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000312|IPR005940|IPR017459|IPR035902|IPR036320 Anthranilate phosphoribosyl transferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase family 3, N-terminal domain superfamily|Glycosyl transferase, family 3|Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily GO:0000162|GO:0004048|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|MF_00211|PF00591|PF02885|SSF47648|SSF52418|TIGR01245 BD65_2840 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000914|IPR025370 Solute-binding protein family 5 domain|Transcriptional regulator SgrR, N-terminal HTH domain G3DSA:3.40.190.10|PF00496|PF12793|SSF53850 BD65_2841 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000150|IPR006379|IPR023214|IPR023938|IPR036412 Cof family|HAD superfamily|HAD-like superfamily|HAD-superfamily hydrolase, subfamily IIB|HMP-PP phosphatase GO:0016787|GO:0016818 G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|MF_01847|PF08282|PS01228|PS01229|SSF56784|TIGR00099|TIGR01484 BD65_2842 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001926|IPR036052 Pyridoxal-phosphate dependent enzyme|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|SSF53686 BD65_2843 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000485|IPR011008|IPR019887|IPR019888|IPR036388|IPR036390 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|SM00344|SSF46785|SSF54909 BD65_2844 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 BD65_2845 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 BD65_2846 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|SM00938|SSF54913 BD65_2847 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001905|IPR002229|IPR018047|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium transporter, conserved site|Ammonium/urea transporter|Blood group Rhesus C/E/D polypeptide GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PR00342|PS01219|SSF111352|TIGR00836 BD65_2848 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003703|IPR029069 Acyl-CoA thioesterase|HotDog domain superfamily GO:0006637|GO:0047617 G3DSA:3.10.129.90|PF13622|SSF54637|TIGR00189 BD65_2849 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014048|IPR036217|IPR036388 Methylated DNA-protein cysteine methyltransferase, DNA binding domain|Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Winged helix-like DNA-binding domain superfamily GO:0003824|GO:0006281 G3DSA:1.10.10.10|PF01035|SSF46767|TIGR00589 BD65_285 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|SSF52317|TIGR00566 BD65_2850 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007985|IPR036666 HHA superfamily|Haemolysin expression modulating, HHA G3DSA:1.20.1280.40|PF05321|SSF68989 BD65_2851 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019693 Biofilm formation regulator YbaJ PF10757 BD65_2852 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002150|IPR027493|IPR034704 L28p-like|Ribosomal protein L31|Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.50|MF_00502|PF01197|PR01249|SSF143800|TIGR00105 BD65_2853 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0006855|GO:0015562|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 BD65_2854 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0005215|GO:0016020|GO:0055085 G3DSA:1.10.287.470|G3DSA:2.40.30.170|G3DSA:2.40.420.20|G3DSA:2.40.50.100|PF00529|PF16576|SSF111369|TIGR01730 BD65_2855 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001647|IPR009057|IPR013572|IPR023772|IPR036271 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeobox-like domain superfamily|Tetracyclin repressor-like, C-terminal domain superfamily|Transcription regulator MAATS, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF08361|PR00455|PS01081|SSF46689|SSF48498 BD65_2856 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003787|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein G3DSA:3.40.1260.10|PF02635|SSF75169 BD65_2857 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006685|IPR006686|IPR010920|IPR011014|IPR011066|IPR023408|IPR024393|IPR025692 LSM domain superfamily|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS domain superfamily|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, conserved site|Mechanosensitive ion channel MscS, porin domain|Mechanosensitive ion channel MscS, transmembrane-2|Mechanosensitive ion channel inner membrane domain 1 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PF12794|PF12795|PS01246|SSF50182|SSF82689|SSF82861 BD65_2858 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019630 Protein of unknown function DUF2496, YbaM-related PF10689 BD65_2859 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010890|IPR038338 PriB/PriC superfamily|Primosomal replication PriB/PriC G3DSA:1.20.1270.340|PF07445 BD65_286 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005257|IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I, TrpE-like, bacterial|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0004049|GO:0009058 G3DSA:3.60.120.10|PF00425|PF04715|PIRSF001373|PR00095|SSF56322|TIGR00565 BD65_2860 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007401 Protein of unknown function DUF454 PF04304|PIRSF016789 BD65_2861 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000836|IPR005764|IPR029057 Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0003999|GO:0005737|GO:0006168|GO:0009116 G3DSA:3.40.50.2020|MF_00004|PF00156|SSF53271|TIGR01090 BD65_2862 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970 BD65_2863 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009936 Protein of unknown function DUF1468 PF07331 BD65_2864 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|G3DSA:3.40.190.150|PF03401|PIRSF017082|SSF53850 BD65_2865 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001867|IPR011006|IPR016032|IPR036388 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BD65_2866 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR013727|IPR036097|IPR036890 HAMP domain|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 BD65_2867 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001270|IPR003593|IPR008921|IPR012763|IPR021029|IPR022001|IPR022754|IPR027417|IPR038249 AAA+ ATPase domain|ClpA/B family|DNA polymerase III subunit tau, DnaB-binding domain IV|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|DNA polymerase III, tau subunit, C-terminal domain superfamily|DNA polymerase III, tau subunit, domain V|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.30.300.150|G3DSA:3.40.50.300|PF12168|PF12169|PF12170|PF13177|PR00300|SM00382|SSF48019|SSF52540|TIGR02397 BD65_2868 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004401|IPR036894 Nucleoid-associated protein YbaB-like domain superfamily|Nucleoid-associated protein YbaB/EbfC family G3DSA:3.30.1310.10|MF_00274|PF02575|PIRSF004555|SSF82607|TIGR00103 BD65_2869 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000093|IPR006171|IPR015967|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Recombination protein RecR, conserved site|TOPRIM domain GO:0003677|GO:0006281|GO:0006310 G3DSA:1.10.8.420|G3DSA:3.40.1360.10|MF_00017|PF02132|PF13662|PS01300|SM00493|SSF111304|TIGR00615 BD65_287 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003141|IPR004013|IPR016195 PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003824 G3DSA:1.10.150.650|G3DSA:3.20.20.140|PF02811|SM00481|SSF89550 BD65_2870 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011004 Trimeric LpxA-like superfamily SSF51161 BD65_2871 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001404|IPR003594|IPR019805|IPR020568|IPR020575|IPR036890|IPR037196 HSP90, C-terminal domain|Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.120.790|G3DSA:3.30.230.80|G3DSA:3.30.565.10|G3DSA:3.40.50.11260|MF_00505|PF00183|PF02518|PIRSF002583|PR00775|PS00298|SM00387|SSF110942|SSF54211|SSF55874 BD65_2872 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000850|IPR006259|IPR007862|IPR027417|IPR033690 Adenylate kinase subfamily|Adenylate kinase, active site lid domain|Adenylate kinase, conserved site|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004017|GO:0005524|GO:0006139|GO:0016776|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PF05191|PR00094|PS00113|SSF52540|TIGR01351 BD65_2873 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001015|IPR019772 Ferrochelatase|Ferrochelatase, active site GO:0004325|GO:0006783 G3DSA:3.40.50.1400|MF_00323|PF00762|PS00534|SSF53800|TIGR00109 BD65_2874 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 G3DSA:1.10.287.210|G3DSA:3.30.1890.10|PF02706|SSF160355 BD65_2875 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011611|IPR029056 Carbohydrate kinase PfkB|Ribokinase-like PF00294|SSF53613 BD65_2876 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003148|IPR004771|IPR006153|IPR036291|IPR038770 Cation/H+ exchanger|K+/H+ exchanger|NAD(P)-binding domain superfamily|Regulator of K+ conductance, N-terminal|Sodium/solute symporter superfamily GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0016021|GO:0055085 G3DSA:1.20.1530.20|G3DSA:3.40.50.720|PF00999|PF02254|SSF51735|TIGR00932 BD65_2878 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004843|IPR006146|IPR006179|IPR008334|IPR029052|IPR036907 5'-Nucleotidase, C-terminal|5'-Nucleotidase, C-terminal domain superfamily|5'-Nucleotidase, conserved site|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0000166|GO:0009166|GO:0016787|GO:0016788|GO:0046872 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|PS00785|PS00786|SSF55816|SSF56300 BD65_288 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|SSF55821|TIGR00057 BD65_2880 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR036397 Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 BD65_2881 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013216|IPR016584|IPR029063 Methyltransferase VrtF-like|Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|PF08241|PIRSF011491|SSF53335 BD65_2882 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527|SSF46689 BD65_2883 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011051|IPR014710|IPR027565 Cupin fold metalloprotein, WbuC family|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182|TIGR04366 BD65_2884 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 BD65_2885 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003331|IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like|UDP-N-acetylglucosamine 2-epimerase domain GO:0008761 G3DSA:3.40.50.2000|PF02350|SSF53756|TIGR00236 BD65_2886 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR029903|IPR036291 NAD(P)-binding domain superfamily|RmlD-like substrate binding domain G3DSA:3.40.50.720|PF04321|SSF51735 BD65_2887 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003869|IPR013692|IPR036291 NAD(P)-binding domain superfamily|Polysaccharide biosynthesis protein, CapD-like domain|UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 G3DSA:3.40.50.720|G3DSA:3.90.25.30|PF02719|PF08485|SSF51735 BD65_2889 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:3.40.50.2000 BD65_289 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103|IPR036986 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain superfamily|RNA-binding S4 domain|RNA-binding S4 domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|PF00849|PF01479|PS01149|SM00363|SSF55120|SSF55174|TIGR00093 BD65_2891 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004369|IPR007214|IPR036754 Prolyl-tRNA editing protein, YbaK/EbsC|YbaK/aminoacyl-tRNA synthetase-associated domain|YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 G3DSA:3.90.960.10|PF04073|PIRSF006181|SSF55826|TIGR00011 BD65_2892 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002816 Pheromone shutdown, TraB PF01963 BD65_2893 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001757|IPR006121|IPR006122|IPR008250|IPR017969|IPR018303|IPR023214|IPR023298|IPR023299|IPR027256|IPR036163|IPR036412 HAD superfamily|HAD-like superfamily|Heavy metal-associated domain superfamily|Heavy metal-associated domain, HMA|Heavy metal-associated domain, copper ion-binding|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain superfamily|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB|P-type ATPase, transmembrane domain superfamily GO:0000166|GO:0005507|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.20|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00943|PS00154|PS01047|SSF55008|SSF56784|SSF81653|SSF81665|TIGR00003|TIGR01494|TIGR01511|TIGR01512|TIGR01525 BD65_2894 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000551|IPR009061|IPR011789 Cu(I)-responsive transcriptional regulator|MerR-type HTH domain|Putative DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0005507|GO:0006355|GO:0045893 G3DSA:1.10.1660.10|PF13411|SM00422|SSF46955|TIGR02044 BD65_2895 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002810 NfeD-like, C-terminal domain G3DSA:2.40.50.140|PF01957|SSF141322 BD65_2896 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001107|IPR001972|IPR018080|IPR036013 Band 7 domain|Band 7/SPFH domain superfamily|Band 7/stomatin-like, conserved site|Stomatin family GO:0016020 G3DSA:3.30.479.30|PF01145|PR00721|PS01270|SM00244|SSF117892 BD65_2897 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990|IPR013766|IPR036249 Tetratricopeptide-like helical domain superfamily|Thioredoxin domain|Thioredoxin-like superfamily GO:0005515|GO:0045454 G3DSA:1.25.40.10|G3DSA:3.40.30.10|PF00085|PF14559|PF14561|SSF48452|SSF52833 BD65_2898 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR020904|IPR036291 NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BD65_2899 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008265|IPR013830|IPR036514 Lipase, GDSL, active site|SGNH hydrolase superfamily|SGNH hydrolase-type esterase domain GO:0006629|GO:0016298 G3DSA:3.40.50.1110|PF13472|PS01098|SSF52266 BD65_29 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001765|IPR036874 Carbonic anhydrase|Carbonic anhydrase superfamily GO:0004089|GO:0008270 G3DSA:3.40.1050.10|PF00484|SM00947|SSF53056 BD65_290 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003724|IPR025826|IPR027417 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR|Cob(I)alamin adenosyltransferase N-terminal domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0008817|GO:0009236 G3DSA:3.40.50.300|PF02572|PF12557|PIRSF015617|SSF52540|TIGR00708 BD65_2900 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_2901 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687 BD65_2902 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003135|IPR005875|IPR011054|IPR013815|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|Phosphoribosylaminoimidazole carboxylase, ATPase subunit|Pre-ATP-grasp domain superfamily|Rudiment single hybrid motif GO:0004638|GO:0005524|GO:0006189 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01928|PF02222|SSF51246|SSF52440|SSF56059|TIGR01161 BD65_2903 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000031|IPR024694|IPR033747|IPR035893 Class I PurE|PurE domain|PurE domain superfamily|PurE, prokaryotic type GO:0006189 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|SM01001|SSF52255|TIGR01162 BD65_2904 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010138|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 G3DSA:3.60.21.10|MF_00575|PF12850|SSF56300|TIGR01854 BD65_2905 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain superfamily|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PS00170|SSF50891 BD65_2906 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|SM00840|SSF47323|SSF52374|TIGR00435 BD65_2907 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001867|IPR016032|IPR036388 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|SM00862|SSF46894 BD65_2908 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031854 Putative membrane protein FidL-like PF15941 BD65_2909 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000259|IPR008966|IPR036937 Adhesion domain superfamily|Fimbrial-type adhesion domain|Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF00419|SSF49401 BD65_291 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR020904|IPR036291 NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|SM00822|SSF51735 BD65_2911 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000015|IPR018030|IPR025885|IPR025949|IPR037224 Fimbrial membrane usher, conserved site|Outer membrane usher protein|PapC, N-terminal domain|PapC, N-terminal domain superfamily|PapC-like, C-terminal domain GO:0005515|GO:0009297|GO:0015473|GO:0016020 G3DSA:2.60.40.2070|G3DSA:2.60.40.2610|G3DSA:2.60.40.3110|G3DSA:3.10.20.410|PF00577|PF13953|PF13954|PS01151|SSF141729 BD65_2912 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001829|IPR008962|IPR013783|IPR016147|IPR016148|IPR018046|IPR036316 Immunoglobulin-like fold|PapD-like superfamily|Pili assembly chaperone, C-terminal|Pili assembly chaperone, C-terminal domain superfamily|Pili assembly chaperone, N-terminal|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site GO:0030288|GO:0043711|GO:0061077|GO:0071555 G3DSA:2.60.40.10|PF00345|PF02753|PR00969|PS00635|SSF49354|SSF49584 BD65_2913 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000259|IPR008966|IPR036937 Adhesion domain superfamily|Fimbrial-type adhesion domain|Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF00419|SSF49401 BD65_2914 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000259|IPR008966|IPR036937 Adhesion domain superfamily|Fimbrial-type adhesion domain|Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF00419|SSF49401 BD65_2915 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000259|IPR008966|IPR036937 Adhesion domain superfamily|Fimbrial-type adhesion domain|Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF00419|SSF49401 BD65_2917 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007016|IPR021797|IPR031726 O-antigen ligase-related|Protein glycosylation ligase domain|Virulence factor membrane-bound polymerase, C-terminal PF04932|PF11846|PF15864 BD65_2918 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR036986 RNA-binding S4 domain superfamily GO:0003723 G3DSA:3.10.290.10|PF13275|SSF55174 BD65_2919 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000672|IPR020630|IPR020631|IPR020867|IPR036291 NAD(P)-binding domain superfamily|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0055114 G3DSA:3.40.50.10860|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00766|PS00767|SSF51735|SSF53223 BD65_292 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002142|IPR013703|IPR029045 ClpP/crotonase-like domain superfamily|Peptidase S49|Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886|GO:0006508|GO:0008233 G3DSA:3.40.1750.20|G3DSA:3.90.226.10|PF01343|PF08496|SSF52096 BD65_2921 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010998|IPR025166|IPR038488 Integrase, DNA-binding domain|Integrase, DNA-binding domain superfamily|Integrase/recombinase, N-terminal G3DSA:1.10.150.130|G3DSA:3.30.160.390|PF13356 BD65_2922 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BD65_2923 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000477 Reverse transcriptase domain PF00078|SSF56672 BD65_2925 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020353 mRNA interferase toxin YafO PF13957 BD65_2927 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527|SSF46689 BD65_2928 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR036397 Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 BD65_2929 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016181|IPR022050 Acyl-CoA N-acyltransferase|Thermostable hemolysin PF12261|SSF55729 BD65_293 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019633|IPR038191 Protein of unknown function DUF2498|YciN superfamily G3DSA:1.10.1900.30|PF10692 BD65_2930 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824 G3DSA:3.40.50.12780|PF00501|PS00455|SSF56801 BD65_2931 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016084 Haem oxygenase-like, multi-helical G3DSA:1.20.910.10|PF14518|SM01236|SSF48613 BD65_2932 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR020904|IPR036291 NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BD65_2933 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|SSF48452 BD65_2934 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008217 Ccc1 family PF01988 BD65_2935 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 PF01292|SSF81342 BD65_2936 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014550 Uncharacterised conserved protein UCP028704, OpgC PF10129 BD65_2937 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000811|IPR011833|IPR035090 Glycogen/starch/alpha-glucan phosphorylase|Glycosyl transferase, family 35|Phosphorylase pyridoxal-phosphate attachment site GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PIRSF000460|PS00102|SSF53756|TIGR02093 BD65_2939 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001932|IPR011006|IPR036457 CheY-like superfamily|PPM-type phosphatase domain|PPM-type phosphatase domain superfamily|Signal transduction response regulator, receiver domain GO:0000160|GO:0003824 G3DSA:3.40.50.2300|G3DSA:3.60.40.10|PF00072|PF07228|SM00331|SM00448|SSF52172 BD65_294 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003601|IPR003602|IPR005733|IPR006171|IPR013263|IPR013497|IPR013498|IPR013824|IPR013825|IPR013826|IPR023405|IPR023406|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase I, zinc ribbon-like, bacterial-type|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, central region, subdomain 3|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|DNA topoisomerase, type IA, zn finger|TOPRIM domain GO:0003677|GO:0003916|GO:0003917|GO:0005694|GO:0006265 G3DSA:1.10.290.10|G3DSA:1.10.460.10|G3DSA:2.20.25.10|G3DSA:2.70.20.10|G3DSA:3.30.65.10|G3DSA:3.40.50.140|MF_00952|PF01131|PF01396|PF01751|PF08272|PR00417|PS00396|SM00436|SM00437|SM00493|SSF56712|SSF57783|TIGR01051 BD65_2940 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002645|IPR003658|IPR036513 Anti-sigma factor antagonist|STAS domain|STAS domain superfamily GO:0006355|GO:0045152 G3DSA:3.30.750.24|PF01740|SSF52091|TIGR00377 BD65_2941 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001451|IPR005835|IPR011004|IPR029044 Hexapeptide repeat|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|Trimeric LpxA-like superfamily GO:0009058|GO:0016779 G3DSA:2.160.10.10|G3DSA:3.90.550.10|PF00132|PF00483|SSF51161|SSF53448 BD65_2942 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR036890 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily G3DSA:3.30.565.10|PF13581|SSF55874 BD65_2943 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BD65_2944 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021478 Protein of unknown function DUF3131 PF11329 BD65_2945 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021478 Protein of unknown function DUF3131 G3DSA:1.50.10.140|PF11329 BD65_2946 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021478 Protein of unknown function DUF3131 G3DSA:1.50.10.140|PF11329 BD65_2947 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006101|IPR006102|IPR006103|IPR006104|IPR008979|IPR013783|IPR017853|IPR036156 Beta-Galactosidase/glucuronidase domain superfamily|Galactose-binding-like domain superfamily|Glycoside hydrolase family 2, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, family 2|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycosyl hydrolases family 2, sugar binding domain|Immunoglobulin-like fold GO:0004553|GO:0005975 G3DSA:2.60.120.260|G3DSA:2.60.40.10|G3DSA:3.20.20.80|PF00703|PF02836|PF02837|PR00132|SSF49303|SSF49785|SSF51445 BD65_2948 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR006189|IPR008207|IPR011006|IPR013655|IPR035965|IPR036097|IPR036641|IPR036890 CHASE domain|CheY-like superfamily|HPT domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|PAC motif|PAS domain|PAS domain superfamily|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.450.350|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01627|PF02518|PF03924|PF08447|PF13426|PR00344|SM00073|SM00086|SM00091|SM00387|SM00388|SM00448|SM01079|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BD65_2949 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000160|IPR001789|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|SM00267|SM00448|SSF52172|SSF55073|TIGR00254 BD65_295 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_2950 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014973|IPR022123 Protein of unknown function DUF1835|Protein of unknown function DUF3658 PF08874|PF12395 BD65_2952 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR016032|IPR036388 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|SM00421|SSF46894 BD65_2953 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002059|IPR012340 Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|SSF50249 BD65_2954 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock domain|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BD65_2955 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|TIGR00494 BD65_2957 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF00583|SSF55729 BD65_2958 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000160|IPR007894|IPR029787 GGDEF domain|MASE2|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PF05230|SM00267|SSF55073|TIGR00254 BD65_2959 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003369|IPR006312|IPR024905 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E|Sec-independent protein translocase protein TatE GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|MF_00903|PF02416|TIGR01411 BD65_2960 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003698|IPR006638|IPR007197|IPR013785|IPR031691 Aldolase-type TIM barrel|Elp3/MiaB/NifB|Lipoyl synthase|Lipoyl synthase, N-terminal|Radical SAM GO:0003824|GO:0009107|GO:0016992|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00206|PF04055|PF16881|PIRSF005963|SM00729|SSF102114|TIGR00510 BD65_2961 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000544|IPR004143|IPR020605 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Octanoyltransferase|Octanoyltransferase, conserved site GO:0006464|GO:0009249|GO:0033819 G3DSA:3.30.930.10|MF_00013|PD006086|PF03099|PIRSF016262|PS01313|SSF55681|TIGR00214 BD65_2962 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007454|IPR027471 Uncharacterised protein family UPF0250|YbeD-like domain superfamily G3DSA:3.30.70.260|MF_00659|PF04359|SSF117991 BD65_2963 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001967|IPR012338|IPR012907|IPR015956|IPR018044|IPR037167 Beta-lactamase/transpeptidase-like|D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily|Penicillin-binding protein, C-terminal domain superfamily|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0004180|GO:0006508|GO:0009002 G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|SM00936|SSF56601|SSF69189 BD65_2964 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007730|IPR009009|IPR012997|IPR034718|IPR036680|IPR036908 Endolytic peptidoglycan transglycosylase RlpA|Rare lipoprotein A|RlpA-like domain superfamily|RlpA-like protein, double-psi beta-barrel domain|Sporulation-like domain|Sporulation-like domain superfamily GO:0016829|GO:0042834 G3DSA:2.40.40.10|G3DSA:3.30.70.1070|MF_02071|PF03330|PF05036|SSF110997|SSF50685|TIGR00413 BD65_2965 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001182|IPR011923|IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site|Probable peptidoglycan glycosyltransferase FtsW/RodA|Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021|GO:0051301 MF_02079|PF01098|PS00428|TIGR02210 BD65_2966 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001460|IPR005311|IPR012338|IPR017790|IPR036138 Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, dimerisation domain superfamily|Penicillin-binding protein, transpeptidase GO:0008658|GO:0009002|GO:0009252|GO:0016020 G3DSA:3.30.1390.30|G3DSA:3.40.710.10|G3DSA:3.90.1310.10|MF_02081|PF00905|PF03717|SSF56519|SSF56601|TIGR03423 BD65_2967 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003742|IPR029026|IPR029028 Alpha/beta knot methyltransferases|RNA methyltransferase RlmH|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0005737|GO:0006364|GO:0008168 G3DSA:3.40.1280.10|MF_00658|PF02590|PIRSF004505|SSF75217|TIGR00246 BD65_2968 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|SSF81301|TIGR00090 BD65_2969 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Nicotinate/nicotinamide nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|SSF52374|TIGR00125|TIGR00482 BD65_2970 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005790|IPR008921|IPR010372|IPR027417|IPR032780 DNA polymerase III delta, N-terminal|DNA polymerase III subunit delta, C-terminal|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF06144|PF14840|SSF48019|SSF52540|TIGR01128 BD65_2971 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 G3DSA:3.30.160.150|MF_01186|PF04390 BD65_2972 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR025709 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.10.20.590|G3DSA:3.10.330.110|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF13603|PR00985|PS00178|SSF47323|SSF50677|SSF52374|TIGR00396 BD65_2973 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009912 Zinc-ribbon containing domain PF07295 BD65_2974 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BD65_2975 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR010065|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|MetI-like superfamily GO:0016020|GO:0016021|GO:0022857|GO:0043190|GO:0055085|GO:0071705 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BD65_2976 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR010065|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|MetI-like superfamily GO:0016020|GO:0016021|GO:0022857|GO:0043190|GO:0055085|GO:0071705 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BD65_2977 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BD65_2979 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003010|IPR004563|IPR036526 Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase|Carbon-nitrogen hydrolase superfamily GO:0006807|GO:0016021|GO:0016410|GO:0042158 G3DSA:3.60.110.10|MF_01148|PF00795|SSF56317|TIGR00546 BD65_298 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000573|IPR001030|IPR006249|IPR015928|IPR015931|IPR018136|IPR036008 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase family, 4Fe-4S cluster binding site|Aconitase, iron-sulfur domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/Iron-responsive element-binding protein 2 G3DSA:1.10.1440.20|G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.30.499.20|PF00330|PF00694|PR00415|PS00450|PS01244|SSF52016|SSF53732|TIGR01341 BD65_2980 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000644|IPR005170|IPR016169|IPR036318 CBS domain|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|Transporter-associated domain GO:0050660 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|SM00116|SM01091|SSF54631|SSF56176 BD65_2981 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002036|IPR020549|IPR023091 Endoribonuclease YbeY|Endoribonuclease YbeY, conserved site|Metalloprotease catalytic domain superfamily, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|PS01306|SSF55486|TIGR00043 BD65_2982 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|SSF52540 BD65_2983 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR038135 Elp3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, N-terminal domain superfamily|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0016740|GO:0051536|GO:0051539 G3DSA:3.40.50.12160|G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|PS01278|SM00729|SSF102114|TIGR00089|TIGR01574 BD65_2984 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002938|IPR010971|IPR036188 FAD-binding domain|FAD/NAD(P)-binding domain superfamily|Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.30.9.50|G3DSA:3.50.50.60|PF01494|PR00420|SSF51905|TIGR01988 BD65_299 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000926|IPR032677|IPR036144 GTP cyclohydrolase II|GTP cyclohydrolase II, RibA|RibA-like superfamily GO:0003935|GO:0009231 G3DSA:3.40.50.10990|MF_00179|PF00925|SSF142695|TIGR00505 BD65_2992 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|SSF52402|SSF56235|TIGR01536 BD65_2993 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006357|IPR023214|IPR036412 HAD superfamily|HAD-like superfamily|HAD-superfamily hydrolase, subfamily IIA G3DSA:3.40.50.1000|PF13242|PF13344|SSF56784|TIGR01460 BD65_2994 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000600|IPR000835|IPR036388|IPR036390 MarR-type HTH domain|ROK family|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PF01047|PS01125|SSF46785|SSF53067 BD65_2995 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003764|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain superfamily|N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PIRSF038994|SSF51338|SSF51556|TIGR00221 BD65_2996 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004547|IPR006148|IPR018321|IPR037171 Glucosamine-6-phosphate isomerase|Glucosamine-6-phosphate isomerase, conserved site|Glucosamine/galactosamine-6-phosphate isomerase|NagB/RpiA transferase-like GO:0004342|GO:0005975|GO:0006044 G3DSA:3.40.50.1360|MF_01241|PF01182|PS01161|SSF100950|TIGR00502 BD65_2997 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001127|IPR001996|IPR003352|IPR010974|IPR011055|IPR018113|IPR036878 Duplicated hybrid motif|Glucose permease domain IIB|Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1|Phosphotransferase system, N-acetylglucosamine-specific IIBC component|Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0008982|GO:0009401|GO:0015572|GO:0016020|GO:0016021|GO:0019866 G3DSA:2.70.70.10|G3DSA:3.30.1360.60|PF00358|PF00367|PF02378|PS00371|PS01035|SSF51261|SSF55604|TIGR00826|TIGR00830|TIGR01998 BD65_2998 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000924|IPR001412|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061|IPR022861 Aminoacyl-tRNA synthetase, class I, conserved site|Glutamine-tRNA ligase, alpha-bundle domain superfamily|Glutamine-tRNA ligase, bacterial|Glutamine-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, N-terminal|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0043039 G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00126|PF00749|PF03950|PR00987|PS00178|SSF50715|SSF52374|TIGR00440 BD65_2999 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005318|IPR023614 Outer membrane porin, bacterial|Porin domain superfamily GO:0016021 G3DSA:2.40.160.10|PF03573 BD65_3 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009809 Cell division protein ZapC MF_00906|PF07126|PIRSF010252 BD65_30 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005170|IPR006037|IPR006153|IPR016169|IPR023729|IPR036318|IPR036721|IPR038770 Cation/H+ exchanger|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|K(+)/H(+) antiporter NhaP2|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, C-terminal domain superfamily|Sodium/solute symporter superfamily|Transporter-associated domain GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0008324|GO:0015299|GO:0016021|GO:0050660|GO:0055085 G3DSA:1.20.1530.20|G3DSA:3.30.465.10|G3DSA:3.30.70.1450|MF_01075|PF00999|PF02080|PF03471|SM01091|SSF116726|SSF56176 BD65_300 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000326|IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase|Phosphatidic acid phosphatase type 2/haloperoxidase superfamily G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 BD65_3000 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025727 YbfN-like lipoprotein PF13982 BD65_3001 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004866|IPR004867|IPR008965|IPR012291|IPR013783|IPR014756|IPR015882|IPR015883|IPR017853|IPR025705|IPR029018 Beta-hexosaminidase|Beta-hexosaminidase, bacterial type, N-terminal|Beta-hexosaminidase-like, domain 2|CBM2, carbohydrate-binding domain superfamily|CBM2/CBM3, carbohydrate-binding domain superfamily|Chitobiase C-terminal domain|Chitobiase/beta-hexosaminidases, N-terminal domain|Glycoside hydrolase family 20, catalytic domain|Glycoside hydrolase superfamily|Immunoglobulin E-set|Immunoglobulin-like fold GO:0004553|GO:0004563|GO:0005975|GO:0030246|GO:0030247 G3DSA:2.60.40.10|G3DSA:2.60.40.290|G3DSA:3.20.20.80|G3DSA:3.30.379.10|PF00728|PF02838|PF03173|PF03174|PR00738|SM01081|SSF49384|SSF51445|SSF55545|SSF81296 BD65_3002 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002481|IPR036388|IPR036390 Ferric-uptake regulator|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.1490.190|PF01475|SSF46785 BD65_3003 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001226|IPR008254|IPR010086|IPR029039 Flavodoxin, conserved site|Flavodoxin, long chain|Flavodoxin/nitric oxide synthase|Flavoprotein-like superfamily GO:0009055|GO:0010181 G3DSA:3.40.50.360|PF00258|PIRSF038996|PS00201|SSF52218|TIGR01752 BD65_3004 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004089|IPR004090|IPR004091 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, methyl-accepting site|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004888|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|PS00538|SM00283|SSF58104 BD65_3005 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PF01402 BD65_3006 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF12697|PR00111|PR00412|SSF53474 BD65_3007 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005621|IPR010985|IPR013321|IPR026577|IPR033761|IPR036835 Arc-type ribbon-helix-helix|Negative modulator of initiation of replication SeqA|Negative modulator of initiation of replication SeqA, N-terminal|Replication modulator SeqA, C-terminal DNA-binding domain|Replication modulator SeqA, C-terminal DNA-binding domain superfamily|Ribbon-helix-helix GO:0003677|GO:0006355|GO:0032297 G3DSA:1.10.1220.10|G3DSA:1.20.1380.10|MF_00908|PF03925|PF17206|PIRSF019401|SSF47598|SSF82808 BD65_3008 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005843|IPR005844|IPR005845|IPR005846|IPR005852|IPR016055|IPR016066|IPR036900 Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, C-terminal domain superfamily|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucomutase, alpha-D-glucose specific GO:0000287|GO:0004614|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PS00710|SSF53738|SSF55957|TIGR01132 BD65_3009 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BD65_301 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010445|IPR032906 Lipopolysaccharide assembly protein A|Lipopolysaccharide assembly protein A domain GO:0005886|GO:0005887|GO:0008653 MF_01948|PF06305 BD65_3010 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001867|IPR011006|IPR036388 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BD65_3011 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003018|IPR003594|IPR003661|IPR003852|IPR004358|IPR025201|IPR029016|IPR036097|IPR036890|IPR038318 GAF domain|GAF-like domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|KdpD, transmembrane domain superfamily|Sensor protein KdpD, transmembrane domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0005515|GO:0007165|GO:0016020|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.620|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.300|PF00512|PF02518|PF02702|PF13492|PF13493|PR00344|SM00387|SM00388|SSF47384|SSF52402|SSF55781|SSF55874 BD65_3012 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MF_00276|PF02669|PIRSF001296|TIGR00681 BD65_3013 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001757|IPR006391|IPR008250|IPR018303|IPR023298|IPR023299|IPR036412 HAD-like superfamily|P-type ATPase|P-type ATPase, A domain superfamily|P-type ATPase, B chain, subfamily IA|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, transmembrane domain superfamily GO:0000166|GO:0005524|GO:0006813|GO:0008556|GO:0016021 G3DSA:2.70.150.20|G3DSA:3.40.1110.10|MF_00285|PF00122|PF00702|PR00119|PS00154|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01497 BD65_3014 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MF_00275|PF03814|PIRSF001294|TIGR00680 BD65_3015 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019663 Uncharacterised protein YbfA PF10725 BD65_3016 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007553|IPR013560|IPR017087 Domain of unknown function DUF1722|Domain of unknown function DUF523|Uncharacterised conserved protein UCP037004 PF04463|PF08349|PIRSF037004 BD65_3017 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002081|IPR005101|IPR006050|IPR014729|IPR018394|IPR036134|IPR036155 Cryptochrome/DNA photolyase class 1|Cryptochrome/DNA photolyase class 1, conserved site, C-terminal|Cryptochrome/DNA photolyase, FAD-binding domain|Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily|Cryptochrome/photolyase, N-terminal domain superfamily|DNA photolyase, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:1.10.579.10|G3DSA:1.25.40.80|G3DSA:3.40.50.620|PF00875|PF03441|PR00147|PS00394|PS00691|SSF48173|SSF52425 BD65_3018 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000396|IPR024225|IPR036866 Cyclic-AMP phosphodiesterase class-II, conserved site|Cyclic-AMP phosphodiesterase, class-II|Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GO:0004115|GO:0006198|GO:0008081 G3DSA:3.60.15.10|PF02112|PIRSF000962|PR00388|PS00607|SSF56281 BD65_3019 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002678|IPR036069 GTP cyclohydrolase 1 type 2/Nif3|GTP cyclohydrolase 1 type 2/Nif3 superfamily G3DSA:3.40.1390.30|PF01784|SSF102705|TIGR00486 BD65_302 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990|IPR019734|IPR030865 Lipopolysaccharide assembly protein B|Tetratricopeptide repeat|Tetratricopeptide-like helical domain superfamily GO:0005515|GO:0008653 G3DSA:1.25.40.10|MF_00994|PF13176|PF13432|SM00028|SSF48452 BD65_3020 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003833|IPR010016|IPR029000 Carboxyltransferase domain, subdomain C and D|Cyclophilin-like domain superfamily|KipI family G3DSA:2.40.100.10|PF02682|SM00796|SSF160467|SSF50891|TIGR00370 BD65_3021 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003778|IPR029000 Carboxyltransferase domain, subdomain A and B|Cyclophilin-like domain superfamily G3DSA:2.40.100.10|PF02626|SM00797|SSF50891|TIGR00724 BD65_3022 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005501|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|UPF0271 family, LamB/YcsF/PxpA GO:0003824|GO:0005975 G3DSA:3.20.20.370|MF_00691|PF03746|SSF88713 BD65_3023 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010374 Protein of unknown function DUF969 PF06149 BD65_3024 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009323 Protein of unknown function DUF979 PF06166 BD65_3025 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000816|IPR016125|IPR029762|IPR033694|IPR036440 Peptidase C15, pyroglutamyl peptidase I|Peptidase C15, pyroglutamyl peptidase I-like|Peptidase C15, pyroglutamyl peptidase I-like superfamily|Pyroglutamyl peptidase I, Cys active site|Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 G3DSA:3.40.630.20|MF_00417|PF01470|PIRSF015592|PR00706|PS01334|SSF53182|TIGR00504 BD65_3026 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002020|IPR010953|IPR016142|IPR016143|IPR019810|IPR024176|IPR036969 Citrate synthase|Citrate synthase active site|Citrate synthase superfamily|Citrate synthase, bacterial-type|Citrate synthase, type I|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0004108|GO:0005737|GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|G3DSA:2.20.28.60|PF00285|PIRSF001369|PR00143|PS00480|SSF48256|TIGR01798 BD65_3027 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000701|IPR014314|IPR018495|IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit|Succinate dehydrogenase, cytochrome b subunit, conserved site|Succinate dehydrogenase, cytochrome b556 subunit|Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0000104|GO:0006099|GO:0009055|GO:0016020|GO:0016627|GO:0045281 G3DSA:1.20.1300.10|PF01127|PIRSF000178|PS01000|PS01001|SSF81343|TIGR02970 BD65_3028 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014312|IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit|Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016020|GO:0016021|GO:0020037 G3DSA:1.20.1300.10|PIRSF000169|SSF81343|TIGR02968 BD65_3029 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003952|IPR003953|IPR011281|IPR014006|IPR015939|IPR027477|IPR036188|IPR037099 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain superfamily|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase, flavoprotein subunit|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0006099|GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PR00368|PS00504|SSF46977|SSF51905|SSF56425|TIGR01812|TIGR01816 BD65_303 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|SSF47598 BD65_3030 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004489|IPR009051|IPR012675|IPR017900|IPR025192|IPR036010 2Fe-2S ferredoxin-like superfamily|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Beta-grasp domain superfamily|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13534|PS00198|SSF46548|SSF54292|TIGR00384 BD65_3031 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001017|IPR005475|IPR011603|IPR029061|IPR031717|IPR032106 2-oxoglutarate dehydrogenase E1 component|2-oxoglutarate dehydrogenase E1 component, N-terminal domain|Dehydrogenase, E1 component|Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal|Thiamin diphosphate-binding fold|Transketolase-like, pyrimidine-binding domain GO:0004591|GO:0006099|GO:0016624|GO:0030976|GO:0055114 G3DSA:1.10.287.1150|G3DSA:3.40.50.11610|G3DSA:3.40.50.12470|G3DSA:3.40.50.970|PF00676|PF02779|PF16078|PF16870|PIRSF000157|SM00861|SSF52518|TIGR00239 BD65_3032 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006255|IPR011053|IPR023213|IPR036625 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain superfamily|Dihydrolipoamide succinyltransferase|E3-binding domain superfamily|Peripheral subunit-binding domain|Single hybrid motif GO:0004149|GO:0006099|GO:0016746|GO:0045252 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|SSF47005|SSF51230|SSF52777|TIGR01347 BD65_3033 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, succinyl-CoA synthetase-type|Succinate--CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0006099 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PS01217|SSF52210|SSF56059|TIGR01016 BD65_3034 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003781|IPR005810|IPR005811|IPR016102|IPR017440|IPR033847|IPR036291 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|ATP-citrate lyase/succinyl-CoA ligase, conserved site|CoA-binding|NAD(P)-binding domain superfamily|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|MF_01988|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|SM00881|SSF51735|SSF52210|TIGR01019 BD65_3035 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004843|IPR006146|IPR006179|IPR008334|IPR029052|IPR036907 5'-Nucleotidase, C-terminal|5'-Nucleotidase, C-terminal domain superfamily|5'-Nucleotidase, conserved site|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0000166|GO:0009166|GO:0016787|GO:0016788|GO:0046872 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|PS00785|PS00786|SSF55816|SSF56300 BD65_3036 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 PF01654|PIRSF006446 BD65_3037 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PIRSF000267|TIGR00203 BD65_3038 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011724|IPR012994 Cyd operon protein YbgT|Membrane bound YbgT-like PF08173|TIGR02106 BD65_3039 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011846 Cyd operon protein YbgE PF09600|TIGR02112 BD65_304 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010854|IPR025543|IPR036275 Dodecin-like|Domain of unknown function DUF1471|YdgH-like superfamily G3DSA:3.30.1660.10|PF07338|SSF159871 BD65_3040 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006683|IPR006684|IPR008272|IPR014166|IPR029069 4-hydroxybenzoyl-CoA thioesterase, active site|Acyl-CoA thioester hydrolase YbgC/YbaW family|HotDog domain superfamily|Thioesterase domain|Tol-Pal system-associated acyl-CoA thioesterase GO:0016787|GO:0016790 G3DSA:3.10.129.10|PF03061|PIRSF003230|PS01328|SSF54637|TIGR00051|TIGR02799 BD65_3041 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002898|IPR014163 MotA/TolQ/ExbB proton channel|Tol-Pal system, TolQ GO:0016021|GO:0043213 MF_02202|PF01618|TIGR02796 BD65_3042 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003400|IPR014168 Biopolymer transport protein ExbD/TolR|Tol-Pal system protein TolR GO:0015031|GO:0016021|GO:0022857|GO:0055085 G3DSA:3.30.420.270|MF_02203|PF02472|TIGR02801 BD65_3043 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 G3DSA:3.30.1150.10|PF06519|SSF74653|TIGR02794 BD65_3044 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007195|IPR011042|IPR011659|IPR014167|IPR036752 Six-bladed beta-propeller, TolB-like|Tol-Pal system protein TolB|TolB, N-terminal|TolB, N-terminal domain superfamily|WD40-like Beta Propeller GO:0015031|GO:0017038|GO:0042597 G3DSA:2.120.10.30|G3DSA:3.40.50.10070|MF_00671|PF04052|PF07676|SSF52964|SSF69304|TIGR02800 BD65_3045 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006664|IPR006665|IPR006690|IPR014169|IPR036737|IPR039001 OmpA-like domain|OmpA-like domain superfamily|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial|Peptidoglycan-associated lipoprotein|Peptidoglycan-associated lipoprotein, C-terminal GO:0009279|GO:0016021|GO:0051301 G3DSA:3.30.1330.60|MF_02204|PF00691|PR01021|PS01068|SSF103088|TIGR02802 BD65_3046 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990|IPR014162|IPR019734|IPR032519|IPR034706 Cell division coordinator CpoB|Cell division coordinator CpoB, C-terminal|Tetratricopeptide repeat|Tetratricopeptide-like helical domain superfamily|YbgF, trimerisation domain GO:0005515|GO:0051301|GO:0070206 G3DSA:1.20.5.110|G3DSA:1.25.40.10|MF_02066|PF13174|PF13432|PF16331|SSF48452|TIGR02795 BD65_3049 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003473|IPR023513|IPR036094 Quinolinate synthase A, type 1|Quinolinate synthetase A|Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0016765|GO:0051539 G3DSA:3.40.50.10800|MF_00567|PF02445|SSF142754|TIGR00550 BD65_305 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001754|IPR011060|IPR013785|IPR014732|IPR018089 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0044205 G3DSA:3.20.20.70|MF_01200_B|PF00215|PS00156|SM00934|SSF51366|TIGR01740 BD65_3050 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001638|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR036097|IPR036641|IPR036890 CheY-like superfamily|HPT domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain|Solute-binding protein family 3/N-terminal domain of MltF GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.190.10|G3DSA:3.40.50.2300|PF00072|PF00497|PF00512|PF02518|PR00344|SM00062|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF53850|SSF55874 BD65_3051 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PF04973|TIGR01528 BD65_3052 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR001789|IPR011006|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal GO:0000160|GO:0003677|GO:0006355 G3DSA:3.40.50.12740|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BD65_3053 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PIRSF001361|SSF51569|TIGR00034 BD65_3054 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001345|IPR005952|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096|GO:0016868 G3DSA:3.40.50.1240|MF_01039|PF00300|PIRSF000709|PS00175|SM00855|SSF53254|TIGR01258 BD65_3057 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008183|IPR011013|IPR013458|IPR014718|IPR015443 Aldose 1-/Glucose-6-phosphate 1-epimerase|Aldose 1-epimerase|Aldose 1-epimerase, bacterial|Galactose mutarotase-like domain superfamily|Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0004034|GO:0005975|GO:0006012|GO:0016853|GO:0019318|GO:0030246 G3DSA:2.70.98.10|PF01263|PIRSF005096|SSF74650|TIGR02636 BD65_3058 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000705|IPR006203|IPR006204|IPR006206|IPR013750|IPR014721|IPR019539|IPR019741|IPR020568|IPR022963|IPR036554 GHMP kinase N-terminal domain|GHMP kinase, ATP-binding, conserved site|GHMP kinase, C-terminal domain|GHMP kinase, C-terminal domain superfamily|Galactokinase|Galactokinase galactose-binding domain|Galactokinase, bacterial|Galactokinase, conserved site|Mevalonate/galactokinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004335|GO:0005524|GO:0005534|GO:0005737|GO:0006012|GO:0016301|GO:0016773|GO:0046835 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00246|PF00288|PF08544|PF10509|PIRSF000530|PR00473|PR00959|PS00106|PS00627|SSF54211|SSF55060|TIGR00131 BD65_3059 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001937|IPR005849|IPR005850|IPR019779|IPR036265 Galactose-1-phosphate uridyl transferase, C-terminal|Galactose-1-phosphate uridyl transferase, N-terminal|Galactose-1-phosphate uridyl transferase, class I|Galactose-1-phosphate uridyl transferase, class I His-active site|HIT-like superfamily GO:0006012|GO:0008108|GO:0008270|GO:0033499 G3DSA:3.30.428.10|PF01087|PF02744|PIRSF000808|PS00117|SSF54197|TIGR00209 BD65_306 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001950|IPR005872|IPR036877 Archaeal/bacterial translation initiation factor SUI1|SUI1 domain|SUI1 domain superfamily GO:0003743|GO:0006413 G3DSA:3.30.780.10|PF01253|PIRSF037511|SSF55159|TIGR01158 BD65_3060 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005886|IPR016040|IPR036291 NAD(P)-binding domain|NAD(P)-binding domain superfamily|UDP-glucose 4-epimerase GO:0003978|GO:0006012 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|SSF51735|TIGR01179 BD65_3061 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517 BD65_3062 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR003725|IPR004606|IPR005116|IPR008995|IPR016462|IPR036388|IPR036390 Molybdate-dependent transcriptional regulator ModE|Molybdate/tungstate binding, C-terminal|Molybdenum-binding protein ModE, N-terminal|Molybdenum-pterin binding|Transcription regulator HTH, LysR|Transport-associated OB, type 1|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355|GO:0015689|GO:0030151 G3DSA:1.10.10.10|G3DSA:2.40.50.100|PF00126|PF03459|PIRSF005763|SSF46785|SSF50331|TIGR00637|TIGR00638 BD65_3063 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 MF_01484|PF10766 BD65_3064 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 G3DSA:3.40.190.10|PF13531|PIRSF004846|SSF53850|TIGR01256 BD65_3065 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR011867|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016020|GO:0016021|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR02141 BD65_3066 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR004606|IPR005116|IPR008995|IPR011868|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate ABC transporter, ATP-binding protein|Molybdate/tungstate binding, C-terminal|Molybdenum-pterin binding|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 1 GO:0005524|GO:0015098|GO:0015689|GO:0016020|GO:0016887 G3DSA:2.40.50.100|G3DSA:3.40.50.300|PF00005|PF03459|PS00211|SM00382|SSF50331|SSF52540|TIGR00638|TIGR02142 BD65_3067 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000150|IPR006379|IPR023214|IPR036412 Cof family|HAD superfamily|HAD-like superfamily|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PR00119|PS01229|SSF56784|TIGR00099|TIGR01484 BD65_3068 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011045|IPR015943|IPR019405|IPR022528 6-phosphogluconolactonase, YbhE-type|Lactonase, 7-bladed beta propeller|Nitrous oxide reductase, N-terminal|WD40/YVTN repeat-like-containing domain superfamily GO:0005515|GO:0005975|GO:0006098|GO:0017057 G3DSA:2.130.10.10|MF_01605|PF10282|SSF50974 BD65_3069 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00834|PF00202|PIRSF000521|PS00600|SSF53383|TIGR00508 BD65_307 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008816 Glycine zipper 2TM domain GO:0019867 PF05433 BD65_3070 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elp3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|SM00729|SM00876|SSF102114|TIGR00433 BD65_3071 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001917|IPR004723|IPR004839|IPR015421|IPR015422|IPR015424|IPR022834 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type|8-amino-7-oxononanoate synthase, Proteobacteria|Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0008710|GO:0009058|GO:0009102|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01693|PF00155|PS00599|SSF53383|TIGR00858 BD65_3072 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011814|IPR013216|IPR029063 Malonyl-[acyl-carrier protein] O-methyltransferase BioC|Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168|GO:0009102|GO:0010340 G3DSA:3.40.50.150|MF_00835|PF08241|SSF53335|TIGR02072 BD65_3073 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|SSF52540|TIGR00347 BD65_3074 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BD65_3075 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417|IPR036876 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UVR domain superfamily|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006289|GO:0009380|GO:0016787|GO:0016887 G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 BD65_3076 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018668|IPR036361 DNA-binding protein VF530-like|SAP domain superfamily GO:0003677 G3DSA:1.10.720.30|PF09905 BD65_3077 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000531|IPR012910|IPR036942|IPR037066 TonB-dependent receptor, plug domain|TonB-dependent receptor, plug domain superfamily|TonB-dependent receptor-like, beta-barrel|TonB-dependent receptor-like, beta-barrel domain superfamily G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 BD65_3078 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002491 ABC transporter periplasmic binding domain G3DSA:3.40.50.1980|PF01497|SSF53807 BD65_3079 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000522|IPR037294 ABC transporter, BtuC-like|ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 BD65_308 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001585|IPR004731|IPR013785|IPR018225 Aldolase-type TIM barrel|Transaldolase type 3B/Fructose-6-phosphate aldolase|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0005975 G3DSA:3.20.20.70|PF00923|PS00958|PS01054|SSF51569|TIGR00875 BD65_3080 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_3081 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002882|IPR010119|IPR038136 Gluconeogenesis factor|Gluconeogenesis factor superfamily|LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 G3DSA:3.40.50.12300|MF_00973|PF01933|SSF142338|TIGR01826 BD65_3083 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000385|IPR006638|IPR007197|IPR010505|IPR013483|IPR013785 Aldolase-type TIM barrel|Elp3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Molybdenum cofactor biosynthesis protein A|Molybdenum cofactor synthesis C-terminal|Radical SAM GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_01225_B|PF04055|PF06463|PF13353|PS01305|SM00729|SSF102114|TIGR02666 BD65_3084 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002820|IPR023045|IPR036522 Molybdenum cofactor biosynthesis C|Molybdopterin cofactor biosynthesis C (MoaC) domain|Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 G3DSA:3.30.70.640|MF_01224_B|PF01967|SSF55040|TIGR00581 BD65_3085 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003749|IPR012675|IPR016155 Beta-grasp domain superfamily|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|Sulfur carrier ThiS/MoaD-like G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01682 BD65_3086 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003448|IPR036563 Molybdopterin biosynthesis MoaE|Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 G3DSA:3.90.1170.40|PF02391|SSF54690 BD65_3087 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006214 Bax inhibitor 1-related PF01027 BD65_3088 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PF12698|PR00164 BD65_3089 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic PF12698 BD65_309 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR000160|IPR001610|IPR003018|IPR013655|IPR013656|IPR029016|IPR029787|IPR035965 GAF domain|GAF-like domain superfamily|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS domain superfamily|PAS fold-3|PAS fold-4 GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00990|PF01590|PF08447|PF08448|SM00065|SM00086|SM00091|SM00267|SSF55073|SSF55781|SSF55785|TIGR00229|TIGR00254 BD65_3090 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_3091 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:1.10.287.470|G3DSA:2.40.30.170|G3DSA:2.40.50.100|PF16576|SSF111369 BD65_3092 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001647|IPR009057|IPR015292|IPR023772|IPR036271 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeobox-like domain superfamily|Tetracyclin repressor-like, C-terminal domain superfamily|Transcription regulator YbiH, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF09209|PR00455|PS01081|SSF46689|SSF48498 BD65_3093 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|SM00487|SM00490|SSF52540 BD65_3094 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001269|IPR013785|IPR018517|IPR032886 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine(16) synthase GO:0002943|GO:0003824|GO:0008033|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.20.225.30|G3DSA:3.20.20.70|MF_02043|PF01207|PIRSF006621|PS01136|SSF51395 BD65_3095 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001611|IPR003591|IPR032675 Leucine-rich repeat|Leucine-rich repeat domain superfamily|Leucine-rich repeat, typical subtype GO:0005515 G3DSA:3.80.10.10|PF00560|PF13855|SM00364|SM00365|SM00369|SSF52058 BD65_3096 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001967|IPR012338|IPR018044 Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 G3DSA:3.40.710.10|PF00768|PR00725|SSF56601 BD65_3097 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006094|IPR012256|IPR015409|IPR016164|IPR016167|IPR016169|IPR016172|IPR016173|IPR036318 D-lactate dehydrogenase|D-lactate dehydrogenase, C-terminal subdomain 1|D-lactate dehydrogenase, C-terminal subdomain 2|D-lactate dehydrogenase, membrane binding, C-terminal|FAD linked oxidase, N-terminal|FAD-binding, type PCMH, subdomain 1|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|FAD-linked oxidase-like, C-terminal GO:0003824|GO:0005887|GO:0006089|GO:0016491|GO:0016901|GO:0019516|GO:0022904|GO:0050660|GO:0055085|GO:0055114 G3DSA:3.30.1370.20|G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.30.70.610|MF_02092|PF01565|PF09330|PIRSF000101|SSF55103|SSF56176 BD65_3098 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023577|IPR033469 CYTH domain|CYTH-like domain superfamily G3DSA:2.40.320.10|PD009560|PF01928|SM01118|SSF55154 BD65_3099 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002711|IPR003615 HNH endonuclease|HNH nuclease GO:0003676|GO:0004519 PF01844|SM00507 BD65_31 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008878 Transposase IS66, Orf2 PF05717 BD65_310 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001900|IPR003029|IPR004476|IPR011129|IPR011804|IPR012340|IPR013223|IPR022966 Cold shock domain|Nucleic acid-binding, OB-fold|Ribonuclease B, N-terminal OB domain|Ribonuclease II|Ribonuclease II/R|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006401|GO:0008859|GO:0016070 G3DSA:2.40.50.140|G3DSA:2.40.50.640|MF_01036|PF00575|PF00773|PF08206|PS01175|SM00357|SM00955|SSF50249|TIGR00358|TIGR02062 BD65_3100 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020941 Suppressor of fused-like domain PF05076 BD65_3101 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 BD65_3102 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR012693|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, phosphonate import, PhnC|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015416|GO:0015716|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR02315 BD65_3103 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005770|IPR017797 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein|Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190|GO:0055085 G3DSA:3.40.190.10|PF12974|SSF53850|TIGR01098|TIGR03431 BD65_3104 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR005769|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|ABC transporter, permease PhnE/PtxC|MetI-like superfamily GO:0005887|GO:0015604|GO:0015716|GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01097 BD65_3105 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR005769|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|ABC transporter, permease PhnE/PtxC|MetI-like superfamily GO:0005887|GO:0015604|GO:0015716|GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01097 BD65_3106 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009921 Domain of unknown function DUF1456 PF07308 BD65_3107 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001307|IPR001763|IPR036873 Rhodanese-like domain|Rhodanese-like domain superfamily|Thiosulphate sulfurtransferase, conserved site GO:0004792 G3DSA:3.40.250.10|PF00581|PS00380|PS00683|SM00450|SSF52821 BD65_3108 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 G3DSA:3.40.190.10|G3DSA:3.40.190.120|PF04069|SSF53850 BD65_3109 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|PR00173|SSF161098 BD65_311 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000445|IPR003265|IPR003651|IPR004035|IPR004036|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PF10576|PIRSF001435|PS00764|PS01155|SM00478|SM00525|SSF48150|TIGR01083 BD65_3110 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_3111 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_3112 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF13520|PIRSF006060 BD65_3113 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000310|IPR005308|IPR008286|IPR011193|IPR015421|IPR015422|IPR015424|IPR036633 Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, C-terminal domain superfamily|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0005737|GO:0006520|GO:0016831 G3DSA:3.40.50.2300|G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|SSF53383|SSF55904 BD65_3114 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001959|IPR010095 Probable transposase, IS891/IS1136/IS1341|Transposase IS605, OrfB, C-terminal PF01385|PF07282|TIGR01766 BD65_3116 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BD65_3117 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001702|IPR001897|IPR023614 Porin domain superfamily|Porin, Gram-negative type|Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 G3DSA:2.40.160.10|PF00267|PR00182|PR00183|SSF56935 BD65_3118 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006555|IPR010614|IPR014001|IPR027417|IPR039000 ATP-dependent DNA helicase DinG|ATP-dependent helicase, C-terminal|DEAD2|Helicase superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006139|GO:0008026|GO:0016818 G3DSA:3.40.50.300|MF_02205|PF06733|PF13307|SM00487|SM00491|SSF52540 BD65_3119 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000312|IPR017459|IPR035902|IPR036320 Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase family 3, N-terminal domain superfamily|Glycosyl transferase, family 3|Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|PF00591|PF02885|SSF47648|SSF52418 BD65_312 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003667|IPR010968 Ion-translocating oxidoreductase complex subunit E|NqrDE/RnfAE GO:0016020|GO:0022900 MF_00478|PF02508|PIRSF006102|TIGR01948 BD65_3120 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010286|IPR016909|IPR029063 Ribosomal RNA large subunit methyltransferase F|Ribosomal RNA large subunit methyltransferase F-like|S-adenosyl-L-methionine-dependent methyltransferase GO:0005737|GO:0006364|GO:0008168|GO:0008988 G3DSA:3.40.50.150|MF_01848|PF05971|PIRSF029038|SSF53335 BD65_3121 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BD65_3122 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR010065|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|MetI-like superfamily GO:0016020|GO:0016021|GO:0022857|GO:0043190|GO:0055085|GO:0071705 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BD65_3123 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001320|IPR001638|IPR018313 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0004970|GO:0016020 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SM00079|SSF53850 BD65_3124 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002177|IPR008331|IPR009078|IPR012347|IPR023067|IPR023188 DNA protection during starvation protein, gammaproteobacteria|DNA-binding protein Dps|DNA-binding protein Dps, conserved site|Ferritin-like|Ferritin-like superfamily|Ferritin/DPS protein domain GO:0006879|GO:0008199|GO:0016722|GO:0055114 G3DSA:1.20.1260.10|MF_01441|PF00210|PIRSF005900|PR01346|PS00818|SSF47240 BD65_3125 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023149|IPR023506|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Trans-aconitate 2-methyltransferase|Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 G3DSA:1.10.150.290|G3DSA:3.40.50.150|MF_00560|PF13649|SSF53335 BD65_3126 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BD65_3127 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000758|IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel|Virulence-related outer membrane protein GO:0009279 G3DSA:2.40.160.20|PF13505|PR00316|PS00694|SSF56925 BD65_3128 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000644|IPR006667|IPR036739|IPR038048 CBS domain|Magnesium transporter MgtE, transmembrane domain|SLC41 divalent cation transporters, integral membrane domain|SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 G3DSA:1.10.357.20|G3DSA:3.10.580.10|PF00571|PF01769|SSF161093|SSF54631 BD65_313 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007329|IPR010209 FMN-binding|Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0010181|GO:0016020|GO:0022900 MF_00479|PF04205|PIRSF006091|SM00900|TIGR01947 BD65_3130 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002524|IPR027469|IPR027470|IPR036837 Cation efflux protein|Cation efflux protein, cytoplasmic domain|Cation efflux protein, cytoplasmic domain superfamily|Cation efflux transmembrane domain superfamily GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PF16916|SSF160240|SSF161111|TIGR01297 BD65_3131 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|SM00382|SSF52540 BD65_3132 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000594|IPR012730|IPR035985 Molybdopterin synthase sulfurylase MoeB|THIF-type NAD/FAD binding fold|Ubiquitin-activating enzyme GO:0006777|GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572|TIGR02355 BD65_3133 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001453|IPR005110|IPR005111|IPR008284|IPR036135|IPR036425|IPR036688 MoaB/Mog domain|MoaB/Mog-like domain superfamily|MoeA, C-terminal, domain IV|MoeA, C-terminal, domain IV superfamily|MoeA, N-terminal and linker domain|MoeA, N-terminal and linker domain superfamily|Molybdenum cofactor biosynthesis, conserved site GO:0006777|GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PS01079|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 BD65_3134 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010323|IPR011990 Protein of unknown function DUF924|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.20.58.320|G3DSA:1.25.40.10|PF06041|SSF48452 BD65_3135 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000801|IPR014186|IPR029058 Alpha/Beta hydrolase fold|Putative esterase|S-formylglutathione hydrolase GO:0018738|GO:0046294 G3DSA:3.40.50.1820|PF00756|SSF53474|TIGR02821 BD65_3136 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002328|IPR011032|IPR013149|IPR013154|IPR014183|IPR020843|IPR036291 Alcohol dehydrogenase class III|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like superfamily|NAD(P)-binding domain superfamily|Polyketide synthase, enoylreductase domain GO:0006069|GO:0008270|GO:0016491|GO:0051903|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|SM00829|SSF50129|SSF51735|TIGR02818 BD65_3137 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.290|PF00126|PF03466|SSF46785|SSF53850 BD65_3138 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010645|IPR036259 MFS transporter superfamily|Uncharacterised MFS-type transporter YbfB G3DSA:1.20.1250.20|PF06779|SSF103473 BD65_3139 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001474|IPR018234|IPR020602 GTP cyclohydrolase I|GTP cyclohydrolase I domain|GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 G3DSA:1.10.286.10|G3DSA:3.30.1130.10|MF_00223|PF01227|PS00859|PS00860|SSF55620|TIGR00063 BD65_314 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004338|IPR011303 Ion-translocating oxidoreductase NqrB/RnfD|Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016020|GO:0016021|GO:0022900|GO:0055085 MF_00462|PF03116|TIGR01946 BD65_3140 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007349 Domain of unknown function DUF418 PF04235 BD65_3141 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain superfamily|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|SM00354|SSF47413|SSF53822 BD65_3143 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BD65_3144 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_3145 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PF02653 BD65_3146 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003848|IPR023604 Domain of unknown function DUF218|Uncharacterised protein family SanA PF02698|PIRSF005011 BD65_3147 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001891|IPR012301|IPR012302|IPR015884|IPR023667|IPR036291|IPR037062 Malic enzyme, N-terminal domain|Malic enzyme, N-terminal domain superfamily|Malic enzyme, NAD-binding|Malic enzyme, conserved site|Malic oxidoreductase|NAD(P)-binding domain superfamily|NAD-dependent malic enzyme, proteobacteria GO:0004470|GO:0004471|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.720|MF_01619|PF00390|PF03949|PIRSF000106|PR00072|PS00331|SM00919|SM01274|SSF51735|SSF53223 BD65_3148 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BD65_3149 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_315 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR011256|IPR018060|IPR020449|IPR029442 DNA binding HTH domain, AraC-type|GyrI-like small molecule binding domain|Homeobox-like domain superfamily|Regulatory factor, effector binding domain superfamily|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.20.80.10|PF06445|PF12833|PR00032|SM00342|SSF46689|SSF55136 BD65_3150 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002125|IPR006263|IPR013171|IPR016192|IPR016193|IPR020797 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminase domain|Cytidine deaminase, bacteria|Cytidine deaminase, homodimeric|Cytidine deaminase-like|Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0003824|GO:0004126|GO:0008270|GO:0009972|GO:0016787 G3DSA:3.40.140.10|MF_01558|PF00383|PF08211|PIRSF006334|PS00903|SSF53927|TIGR01355 BD65_3151 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005261|IPR007300 CidB/LrgB family|Conserved hypothetical protein CHP00659 PF04172|TIGR00659 BD65_3152 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005538|IPR022957 LrgA/CidA family|Uncharacterised protein family UPF0299 GO:0016021 MF_01144|PF03788 BD65_3153 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002686|IPR036515 Transposase IS200-like|Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|SM01321|SSF143422 BD65_3154 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001959|IPR010095 Probable transposase, IS891/IS1136/IS1341|Transposase IS605, OrfB, C-terminal PF01385|PF07282|TIGR01766 BD65_3157 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001412|IPR002547|IPR004495|IPR009080|IPR012340|IPR014729|IPR014758|IPR015413|IPR023458|IPR029038|IPR033911 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Methionine-tRNA ligase, type 1|Methioninyl-tRNA synthetase core domain|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, Zn-domain|Methionyl-tRNA synthetase, beta subunit, C-terminal|Methionyl/Leucyl tRNA synthetase|Nucleic acid-binding, OB-fold|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-binding domain GO:0000049|GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.20.28.20|G3DSA:2.40.50.140|G3DSA:3.40.50.620|MF_00098|PF01588|PF09334|PR01041|PS00178|SSF47323|SSF50249|SSF52374|SSF57770|TIGR00398|TIGR00399 BD65_3158 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000808|IPR019591|IPR027417|IPR033756|IPR034904 Fe-S cluster assembly domain superfamily|Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35|Mrp, conserved site|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|MF_02040|PF10609|PS01215|SSF117916|SSF52540 BD65_3159 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000764|IPR006083|IPR026008|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase/uridine kinase|Uridine kinase|Uridine kinase-like GO:0004849|GO:0005524|GO:0016301|GO:0016773 G3DSA:3.40.50.300|MF_00551|PF00485|PR00988|SSF52540|TIGR00235 BD65_3160 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011962|IPR029054|IPR036157 dCTP deaminase|dUTPase-like|dUTPase-like superfamily GO:0006229|GO:0008829 G3DSA:2.70.40.10|MF_00146|PF00692|SSF51283|TIGR02274 BD65_3161 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007844 AsmA PF05170 BD65_3163 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004669|IPR018385 C4-dicarboxylate anaerobic carrier|C4-dicarboxylate anaerobic carrier-like GO:0015556|GO:0015740|GO:0016021 PF03606|TIGR00771 BD65_3164 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000644|IPR005170|IPR005496|IPR016169|IPR036318 CBS domain|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|Integral membrane protein TerC|Transporter-associated domain GO:0016021|GO:0050660 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PF03741|SM01091|SSF54631|SSF56176 BD65_3165 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005771|IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011|GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448|TIGR01099 BD65_3166 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448 BD65_3167 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006113|IPR006114|IPR006115|IPR006183|IPR006184|IPR008927|IPR013328|IPR036291 6-phosphogluconate dehydrogenase|6-phosphogluconate dehydrogenase, C-terminal|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, decarboxylating|6-phosphogluconate dehydrogenase, domain 2|6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|6-phosphogluconate-binding site|NAD(P)-binding domain superfamily GO:0004616|GO:0006098|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:1.20.5.320|G3DSA:3.40.50.720|PF00393|PF03446|PIRSF000109|PR00076|PS00461|SM01350|SSF48179|SSF51735|TIGR00873 BD65_3168 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002496|IPR008179|IPR021130|IPR023019|IPR038019 Histidine biosynthesis bifunctional protein HisIE|Phosphoribosyl-AMP cyclohydrolase domain|Phosphoribosyl-AMP cyclohydrolase domain superfamily|Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like GO:0000105|GO:0004635|GO:0004636 G3DSA:1.10.287.1080|G3DSA:3.10.20.400|MF_01019|MF_01020|PD002610|PF01502|PF01503|SSF101386|SSF141734|TIGR03188 BD65_3169 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004651|IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel GO:0000105|GO:0000107|GO:0003824|GO:0005737 G3DSA:3.20.20.70|MF_01013|PF00977|SSF51366|TIGR00735 BD65_3170 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006062|IPR006063|IPR011060|IPR013785|IPR023016 Aldolase-type TIM barrel|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0003949 G3DSA:3.20.20.70|MF_01014|PF00977|SSF51366|TIGR00007 BD65_3171 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010139|IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|PR00096|SSF52317|TIGR01855 BD65_3172 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000807|IPR005954|IPR006543|IPR006549|IPR020565|IPR020566|IPR020568|IPR023214|IPR036412|IPR038494 HAD superfamily|HAD-like superfamily|HAD-superfamily hydrolase,subfamily IIIA|Histidine biosynthesis bifunctional protein HisB|Histidinol-phosphatase|Histidinol-phosphate phosphatase|Imidazole glycerol phosphate dehydratase domain superfamily|Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000105|GO:0004401|GO:0004424|GO:0005737|GO:0016791 G3DSA:3.30.230.40|G3DSA:3.40.50.1000|MF_00076|MF_01022|PF00475|PF13242|PS00954|PS00955|SSF54211|SSF56784|TIGR01261|TIGR01656|TIGR01662 BD65_3173 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001917|IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0000105|GO:0003824|GO:0004400|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PS00599|SSF53383|TIGR01141 BD65_3174 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001692|IPR012131|IPR016161|IPR022695 Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, conserved site|Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PS00611|SSF53720|TIGR00069 BD65_3175 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011322|IPR013115|IPR013820|IPR015867|IPR018198|IPR020621 ATP phosphoribosyltransferase HisG, long form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site|Histidine biosynthesis HisG, C-terminal|Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 G3DSA:3.30.70.120|G3DSA:3.40.190.10|MF_00079|PF01634|PF08029|PS01316|SSF53850|SSF54913|TIGR00070|TIGR03455 BD65_3176 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002686|IPR036515 Transposase IS200-like|Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|SM01321|SSF143422 BD65_3179 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001509|IPR036291 NAD(P)-binding domain superfamily|NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 BD65_3180 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004045|IPR004046|IPR036249|IPR036282 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal domain superfamily|Glutathione S-transferase, N-terminal|Thioredoxin-like superfamily GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BD65_3181 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006385|IPR023214|IPR036412 HAD superfamily|HAD-like superfamily|HAD-superfamily hydrolase, subfamily IB, SerB1-like G3DSA:1.20.1440.100|G3DSA:3.40.50.1000|PF12710|SSF56784|TIGR01488|TIGR01490 BD65_3183 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005123|IPR026992|IPR027443 Isopenicillin N synthase-like|Non-haem dioxygenase N-terminal domain|Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 G3DSA:2.60.120.330|PF03171|PF14226|PR00682|SSF51197 BD65_3184 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000277|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383 BD65_3185 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000644|IPR001216|IPR001926|IPR036052 CBS domain|Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Pyridoxal-phosphate dependent enzyme|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0006535 G3DSA:3.10.580.10|G3DSA:3.40.50.1100|PF00291|PF00571|PS00901|SM00116|SSF53686|SSF54631 BD65_3186 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001967|IPR012338|IPR012907|IPR015956|IPR018044|IPR037167 Beta-lactamase/transpeptidase-like|D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily|Penicillin-binding protein, C-terminal domain superfamily|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0004180|GO:0006508|GO:0009002 G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|SM00936|SSF56601|SSF69189 BD65_3187 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004644|IPR005130|IPR005131|IPR029009 Allosteric substrate binding domain superfamily|Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit GO:0003941|GO:0006094|GO:0051539 G3DSA:3.30.1330.90|PF03313|PF03315|SSF143548|TIGR00720 BD65_3188 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 TIGR00814 BD65_3189 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001034|IPR014036|IPR018356|IPR037171 DeoR C-terminal sensor domain|DeoR-type HTH domain|NagB/RpiA transferase-like|Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0005622|GO:0006355 PF00455|PF08220|PS00894|SM00420|SM01134|SSF100950 BD65_319 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009051|IPR010208|IPR011538|IPR017896|IPR017900|IPR019554|IPR026902|IPR037225 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Ion-translocating oxidoreductase complex, subunit RnfC/RsxC|NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily|RnfC Barrel sandwich hybrid domain|Soluble ligand binding domain GO:0009055|GO:0016020|GO:0051536|GO:0051539 G3DSA:1.10.1060.10|G3DSA:3.40.50.11540|MF_00461|PF01512|PF10531|PF13237|PF13375|PS00198|SSF142019|SSF46548|TIGR01945 BD65_3190 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002915|IPR011343|IPR013785|IPR028581 Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase|Deoxyribose-phosphate aldolase|Deoxyribose-phosphate aldolase type I GO:0003824|GO:0004139|GO:0005737|GO:0009264|GO:0016829 G3DSA:3.20.20.70|MF_00114|PF01791|PIRSF001357|SM01133|SSF51569|TIGR00126 BD65_3191 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000326|IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase|Phosphatidic acid phosphatase type 2/haloperoxidase superfamily G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 BD65_3192 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000326|IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase|Phosphatidic acid phosphatase type 2/haloperoxidase superfamily G3DSA:1.20.144.10|PF01569|SSF48317 BD65_3193 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006037|IPR006512|IPR023017|IPR036721 Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, C-terminal domain superfamily|Transport protein YbjL, putative|YidE/YbjL duplication GO:0006813|GO:0008324 G3DSA:3.30.70.1450|MF_01015|PF02080|PF06826|SSF116726|TIGR01625 BD65_3194 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002109|IPR011767|IPR011902|IPR014025|IPR036249 Glutaredoxin|Glutaredoxin active site|Glutaredoxin subgroup|Glutaredoxin, GrxA|Thioredoxin-like superfamily GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PR00160|PS00195|SSF52833|TIGR02183 BD65_3195 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010815 Protein of unknown function DUF1418 PF07214 BD65_3196 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019660 Putative sensory transduction regulator YbjN PF10722 BD65_3197 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001188|IPR006059 Bacterial extracellular solute-binding protein|Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 G3DSA:3.40.190.10|PF13416|PIRSF019574|PR00909|SSF53850 BD65_3198 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR005893|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Spermidine/putrescine ABC transporter, ATP-binding subunit|Transport-associated OB, type 2 GO:0005524|GO:0015417|GO:0015846|GO:0016887|GO:0022857|GO:0043190|GO:0055085 G3DSA:2.40.50.140|G3DSA:2.40.50.940|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540|TIGR01187 BD65_3199 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_32 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004291|IPR024474 Transposase, IS66|Zinc-finger binding domain of transposase IS66 PF03050|PF13005 BD65_320 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007202|IPR010207|IPR011005|IPR016463|IPR017900 4Fe-4S domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Dihydropteroate synthase-like|Electron transport complex, RnfB/RsxB, Proteobacteria|Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0005886|GO:0009055|GO:0022900|GO:0044237|GO:0051536 G3DSA:3.20.20.20|G3DSA:3.30.70.20|MF_00463|PF04060|PF14697|PIRSF005784|PS00198|SSF54862|TIGR01944 BD65_3200 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_3201 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019703 Protein of unknown function DUF2593 PF10767 BD65_3202 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010280|IPR011825|IPR029063|IPR030390|IPR030391 (Uracil-5)-methyltransferase family|23S rRNA (uracil(747)-C(5))-methyltransferase RlmC|RNA methyltransferase TrmA, active site|RNA methyltransferase TrmA, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0006396|GO:0008173|GO:0016070|GO:0016436 G3DSA:3.40.1350.30|G3DSA:3.40.50.150|MF_01012|PF05958|PS01230|PS01231|SSF53335|TIGR02085 BD65_3203 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001320|IPR001638|IPR005768|IPR018313 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site|Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0004970|GO:0016020|GO:0030288|GO:0071705 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SM00079|SSF53850|TIGR01096 BD65_3204 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR010065|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|MetI-like superfamily GO:0016020|GO:0016021|GO:0022857|GO:0043190|GO:0055085|GO:0071705 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BD65_3205 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR010065|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|MetI-like superfamily GO:0016020|GO:0016021|GO:0022857|GO:0043190|GO:0055085|GO:0071705 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BD65_3206 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001320|IPR001638|IPR005768|IPR018313 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site|Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0004970|GO:0016020|GO:0030288|GO:0071705 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SM00079|SSF53850|TIGR01096 BD65_3207 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BD65_3208 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR024289 Domain of unknown function DUF3828 PF12883 BD65_3209 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002765|IPR035439 UPF0145 domain superfamily|Uncharacterised protein family UPF0145 G3DSA:3.30.110.70|MF_00338|PF01906|SSF117782 BD65_321 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003667|IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA|NqrDE/RnfAE GO:0016020|GO:0022900 MF_00459|PF02508|PIRSF006102|TIGR01943 BD65_3210 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001509|IPR036291 NAD(P)-binding domain superfamily|NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 BD65_3211 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016040|IPR021295|IPR036291 NAD(P)-binding domain|NAD(P)-binding domain superfamily|Protein of unknown function DUF2867 G3DSA:3.40.50.720|PF11066|PF13460|SSF51735 BD65_3212 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001597|IPR015421|IPR015422|IPR015424|IPR023603 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|Threonine aldolase GO:0003824|GO:0006520|GO:0016829 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF017617|SSF53383 BD65_3213 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001041|IPR001433|IPR001709|IPR001834|IPR006058|IPR008333|IPR012675|IPR017938|IPR036010|IPR039261 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-like superfamily|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain superfamily|Ferredoxin-NADP reductase (FNR), nucleotide-binding domain|Flavoprotein pyridine nucleotide cytochrome reductase|Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain|NADH:cytochrome b5 reductase (CBR)|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00406|PS00197|SSF52343|SSF54292|SSF63380 BD65_3214 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004137|IPR010048|IPR011254|IPR016099|IPR016100 Hydroxylamine reductase|Hydroxylamine reductase/Ni-containing CO dehydrogenase|Prismane, alpha-bundle|Prismane-like superfamily|Prismane-like, alpha/beta-sandwich GO:0003824|GO:0005737|GO:0016491|GO:0016661|GO:0051536|GO:0055114 G3DSA:1.20.1270.20|G3DSA:3.40.50.2030|MF_00069|PF03063|PIRSF000076|SSF56821|TIGR01703 BD65_3215 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005642 Lysine exporter LysO PD022789|PF03956 BD65_3217 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007488 Protein of unknown function DUF535 PF04393 BD65_3219 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0005215|GO:0016020|GO:0055085 G3DSA:1.10.287.470|G3DSA:2.40.30.170|G3DSA:2.40.420.20|G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BD65_322 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019690 Protein of unknown function DUF2569 PF10754 BD65_3220 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR003838|IPR017871|IPR025857|IPR027417 AAA+ ATPase domain|ABC transporter permease protein domain|ABC transporter, conserved site|ABC transporter-like|MacB-like periplasmic core domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02687|PF12704|PS00211|SM00382|SSF52540 BD65_3221 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR012751|IPR019844 Cold shock domain|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|CspD, cold shock|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0005737|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249|TIGR02381 BD65_3222 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003769|IPR014719|IPR022935 ATP-dependent Clp protease adaptor protein ClpS|Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0030163 G3DSA:3.30.1390.10|MF_00302|PF02617|SSF54736 BD65_3223 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR013461|IPR018368|IPR019489|IPR027417|IPR028299|IPR036628 AAA+ ATPase domain|ATP-dependent Clp protease ATP-binding subunit ClpA|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|Clp, N-terminal domain superfamily|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0019538|GO:0043335 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR02639 BD65_3224 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004368|IPR006196|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|SM00316|SSF50249|TIGR00008 BD65_3225 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004616|IPR016181 Acyl-CoA N-acyltransferase|Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 G3DSA:2.30.210.20|G3DSA:3.40.630.70|MF_00688|PF03588|SSF55729|TIGR00667 BD65_3226 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR011527|IPR014223|IPR017871|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016021|GO:0016887|GO:0034775|GO:0042626|GO:0045454|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR02868 BD65_3227 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR011527|IPR014216|IPR017871|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016021|GO:0016887|GO:0042626|GO:0042883|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR02857 BD65_3228 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000103|IPR005982|IPR008255|IPR023753|IPR036188 FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|SSF51905|TIGR01292 BD65_3229 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000485|IPR011008|IPR019887|IPR019888|IPR036388|IPR036390 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|SM00344|SSF46785|SSF54909 BD65_323 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000559|IPR020628|IPR027417 Formate-tetrahydrofolate ligase, FTHFS|Formate-tetrahydrofolate ligase, FTHFS, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0004329|GO:0005524 G3DSA:3.10.410.10|G3DSA:3.30.1510.10|G3DSA:3.40.50.300|MF_01543|PF01268|PS00722|SSF52540 BD65_3230 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002543|IPR018541|IPR025199|IPR027417|IPR036388|IPR036390 DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0000166|GO:0003677|GO:0005524 G3DSA:1.10.10.10|G3DSA:3.30.980.40|G3DSA:3.40.50.300|PF01580|PF09397|PF13491|SM00843|SSF46785|SSF52540 BD65_3231 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004564|IPR018323|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA, Proteobacteria|Outer membrane lipoprotein carrier protein LolA-like GO:0042597|GO:0042953|GO:0042954 G3DSA:2.50.20.10|MF_00240|PF03548|SSF89392|TIGR00547 BD65_3232 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003593|IPR003959|IPR008921|IPR021886|IPR027417|IPR032423 AAA C-terminal domain|AAA+ ATPase domain|ATPase, AAA-type, core|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0006260 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF00004|PF12002|PF16193|SM00382|SSF48019|SSF52540 BD65_3233 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|SSF46589|SSF55681|TIGR00414 BD65_3235 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR023745|IPR036259 MFS transporter superfamily|MSF-type transporter, YcaD|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|MF_01149|PF07690|SSF103473 BD65_3236 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001989|IPR007197|IPR012838|IPR012839|IPR013785 Aldolase-type TIM barrel|Organic radical enzyme activase|Pyruvate formate-lyase 1 activating enzyme|Radical SAM|Radical-activating enzyme, conserved site GO:0003824|GO:0016491|GO:0043365|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.20.20.70|PF04055|PF13353|PIRSF000371|PS01087|SSF102114|TIGR02493 BD65_3237 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001150|IPR004184|IPR005949|IPR019777 Formate C-acetyltransferase glycine radical, conserved site|Formate acetyltransferase|Glycine radical domain|Pyruvate formate lyase domain GO:0003824|GO:0005737|GO:0005975|GO:0008861 G3DSA:3.20.70.20|PF01228|PF02901|PIRSF000379|PS00850|SSF51998|TIGR01255 BD65_3238 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000292|IPR023271|IPR023999|IPR024002 Aquaporin-like|Formate transporter FocA, putative|Formate/nitrite transporter|Formate/nitrite transporter, conserved site GO:0015499|GO:0015724|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1080.10|PF01226|PS01005|PS01006|TIGR00790|TIGR04060 BD65_3239 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003776 YcaO-like domain PF02624|TIGR00702 BD65_324 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004537|IPR014431|IPR014710|IPR015392|IPR015985|IPR029063 Domain of unknown function DUF1971|RmlC-like jelly roll fold|S-adenosyl-L-methionine-dependent methyltransferase|Tellurite resistance methyltransferase TehB-like domain|Tellurite resistance methyltransferase, TehB|Tellurite resistance methyltransferase, TehB type-2 GO:0005737|GO:0008757|GO:0046690 G3DSA:2.60.120.10|G3DSA:3.40.50.150|PF03848|PF09313|PIRSF005215|SSF51197|SSF53335|TIGR00477 BD65_3240 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004550|IPR006034|IPR020827|IPR027473|IPR027474|IPR027475|IPR036152|IPR037152 Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|Asparaginase/glutaminase-like|Asparaginase/glutaminase-like superfamily|L-asparaginase, C-terminal|L-asparaginase, N-terminal|L-asparaginase, N-terminal domain superfamily|L-asparaginase, type II GO:0004067|GO:0006520|GO:0006528 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|SM00870|SSF53774|TIGR00520 BD65_3241 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR022278 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Phosphoserine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00160|PF00266|PIRSF000525|PS00595|SSF53383|TIGR01364 BD65_3242 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001986|IPR006264|IPR013792|IPR023193|IPR036968 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|Enolpyruvate transferase domain superfamily|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0009073|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00104|PS00885|SSF55205|TIGR01356 BD65_3243 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|SSF52540|TIGR00017 BD65_3244 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PIRSF002111|PR00681|SM00316|SSF50249|TIGR00717 BD65_3245 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000119|IPR005685|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain superfamily|Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 G3DSA:4.10.520.10|MF_00381|PF00216|PR01727|PS00045|SM00411|SSF47729|TIGR00988 BD65_3246 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001279|IPR004477|IPR004797|IPR025405|IPR036866 ComEC/Rec2-related protein|Competence protein ComEC/Rec2|Domain of unknown function DUF4131|Metallo-beta-lactamase|Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GO:0016021|GO:0030420 G3DSA:3.60.15.10|PF00753|PF03772|PF13567|SM00849|SSF56281|TIGR00360|TIGR00361 BD65_3247 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR011527|IPR011917|IPR017871|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter, conserved site|ABC transporter, lipid A export, MsbA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016021|GO:0016887|GO:0034040|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR02203 BD65_3248 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003758|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 MF_00409|PF02606|SSF52540|TIGR00682 BD65_3249 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009770 Domain of unknown function DUF1338 G3DSA:3.10.180.80|PF07063|SM01150 BD65_325 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000683|IPR004104|IPR036291 NAD(P)-binding domain superfamily|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|SSF51735 BD65_3250 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock domain|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BD65_3251 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002059|IPR011129|IPR012156|IPR012340 Cold shock domain|Cold shock, CspA|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|SM00357|SSF50249 BD65_3252 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005651|IPR038053 Trm112-like|Uncharacterised protein family UPF0434 G3DSA:2.20.25.10|MF_01187|PF03966|SSF158997 BD65_3253 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|SSF53448|TIGR00466 BD65_3254 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain superfamily G3DSA:3.90.1200.10|PF01636|SSF56112 BD65_3255 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003848 Domain of unknown function DUF218 PF02698 BD65_3256 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025714|IPR029063|IPR033664 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase|tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 G3DSA:3.40.50.150|MF_02057|PF13847|SSF53335 BD65_3257 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005582|IPR033439|IPR033440|IPR033441|IPR036141|IPR036388|IPR036390|IPR038198 Chromosome partition protein MukF|Chromosome partition protein MukF, C-terminal domain|Chromosome partition protein MukF, middle domain|Chromosome partition protein MukF, winged-helix domain|MukF, C-terminal domain superfamily|MukF, middle domain superfamily|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0005509|GO:0006260|GO:0007059 G3DSA:1.10.10.10|G3DSA:1.10.225.40|G3DSA:1.20.58.590|MF_01803|PF03882|PF17192|PF17193|PIRSF018282|SSF140570|SSF46785 BD65_3258 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 G3DSA:1.10.10.2250|G3DSA:1.10.10.2260|MF_01802|PF04288 BD65_3259 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007406|IPR012090|IPR027417|IPR032520 Chromosome partition protein MukB|MukB, N-terminal domain|MukB, hinge domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 G3DSA:1.20.1060.30|G3DSA:1.20.58.850|G3DSA:3.40.1140.10|MF_01800|PF04310|PF13558|PF16330|PIRSF005246|SSF52540 BD65_326 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016833|IPR038770 Putative sodium bile acid cotransporter|Sodium/solute symporter superfamily G3DSA:1.20.1530.20|PF13593|PIRSF026166 BD65_3260 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002477|IPR005490|IPR036365|IPR038063 L,D-transpeptidase catalytic domain|L,D-transpeptidase catalytic domain-like|PGBD-like superfamily|Peptidoglycan binding-like GO:0016740 PF01471|PF03734|SSF141523|SSF47090 BD65_3261 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009045|IPR010275 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily|Protein of unknown function DUF882 G3DSA:3.30.1380.10|PF05951|SSF55166 BD65_3262 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001279|IPR036866 Metallo-beta-lactamase|Ribonuclease Z/Hydroxyacylglutathione hydrolase-like G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BD65_3263 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001633|IPR024744|IPR035919 EAL domain|EAL domain superfamily|Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain G3DSA:3.20.20.450|PF00563|PF12792|SM00052|SSF141868 BD65_3264 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000796|IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Aspartate/other aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0006520|GO:0008483|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PR00799|PS00105|SSF53383 BD65_3265 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001702|IPR001897|IPR013793|IPR023614 Porin domain superfamily|Porin, Gram-negative type|Porin, Gram-negative type, conserved site|Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 G3DSA:2.40.160.10|PF00267|PR00182|PR00183|PS00576|SSF56935 BD65_3266 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002312|IPR004364|IPR004365|IPR004522|IPR012340 Aminoacyl-tRNA synthetase, class II (D/K/N)|Asparagine-tRNA ligase|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004816|GO:0005524|GO:0005737|GO:0006418|GO:0006421 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00534|PF00152|PF01336|PR01042|SSF50249|SSF55681|TIGR00457 BD65_3267 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007229|IPR036068 Nicotinate phosphoribosyltransferase family|Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 G3DSA:3.20.140.10|PF04095|SSF51690 BD65_327 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001365|IPR006330|IPR006650|IPR028893|IPR032466 Adenosine deaminase|Adenosine/AMP deaminase active site|Adenosine/AMP deaminase domain|Adenosine/adenine deaminase|Metal-dependent hydrolase GO:0004000|GO:0009168|GO:0019239 G3DSA:3.20.20.140|MF_00540|PF00962|PS00485|SSF51556|TIGR01430 BD65_328 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010352 Protein of unknown function DUF945 PF06097 BD65_329 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001250|IPR011051|IPR014710|IPR016305|IPR018050 Mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type I|Phosphomannose isomerase, type I, conserved site|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold GO:0004476|GO:0005975|GO:0008270|GO:0009298 G3DSA:1.10.441.10|G3DSA:2.60.120.10|PF01238|PIRSF001480|PR00714|PS00965|PS00966|SSF51182|TIGR00218 BD65_331 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000362|IPR005677|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate hydratase, class II|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004333|GO:0006099|GO:0006106|GO:0016829|GO:0045239 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00743|PF00206|PF10415|PR00145|PR00149|PS00163|SSF48557|TIGR00979 BD65_332 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008865|IPR036381|IPR036384 DNA replication terminus site-binding protein|Replication terminator Tus superfamily|Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 G3DSA:3.30.54.10|G3DSA:3.50.14.10|MF_00483|PF05472|SSF56596|TIGR02648 BD65_333 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000600|IPR036388|IPR036390 ROK family|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|SSF46785|SSF53067 BD65_334 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|SSF52540|TIGR00347 BD65_335 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|PF00654|PR00762|SSF81340 BD65_336 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010595 Protein of unknown function DUF1161 PD336997|PF06649 BD65_337 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009700 Protein of unknown function DUF1283 MF_01581|PD073251|PF06932 BD65_338 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003844 Uncharacterised protein family UPF0060 GO:0016020 MF_00010|PF02694 BD65_339 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR020904|IPR036291 NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BD65_34 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002686|IPR036515 Transposase IS200-like|Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|SM01321|SSF143422 BD65_340 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002502|IPR036365|IPR036366|IPR036505 N-acetylmuramoyl-L-alanine amidase domain|N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily|PGBD superfamily|PGBD-like superfamily GO:0008745|GO:0009253 G3DSA:1.10.101.10|G3DSA:3.40.80.10|PF01510|SM00644|SSF47090|SSF55846 BD65_341 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007213|IPR029063 Methyltransferase Ppm1/Ppm2/Tcmp|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF04072|SSF53335 BD65_343 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005083 Serine/Threonine acetyltransferase, YopJ PF03421 BD65_345 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000845|IPR011271|IPR018953|IPR035994|IPR037109 AMP nucleosidase|AMP nucleoside phosphorylase, N-terminal|AMP nucleoside phosphorylase, N-terminal domain superfamily|Nucleoside phosphorylase domain|Nucleoside phosphorylase superfamily GO:0003824|GO:0008714|GO:0009116|GO:0044209 G3DSA:3.30.1730.10|G3DSA:3.40.50.1580|MF_01932|PF01048|PF10423|SSF53167|TIGR01717 BD65_347 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009216 Virulence factor SrfB PF07520|PIRSF034585 BD65_348 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017030 Virulence effector, SrfC PF10139|PIRSF034586 BD65_349 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010662|IPR029058 Alpha/Beta hydrolase fold|Putative hydrolase RBBP9/YdeN GO:0016787 G3DSA:3.40.50.1820|PF06821|SSF53474 BD65_350 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel SSF56925 BD65_351 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001279|IPR029228|IPR029229|IPR036527|IPR036866|IPR038536 Alkyl sulfatase dimerisation domain|Alkyl sulfatase, C-terminal|Alkyl/aryl-sulfatase, dimerisation domain superfamily|Metallo-beta-lactamase|Ribonuclease Z/Hydroxyacylglutathione hydrolase-like|SCP2 sterol-binding domain superfamily GO:0046983 G3DSA:1.25.40.880|G3DSA:3.30.1050.10|G3DSA:3.60.15.30|PF00753|PF14863|PF14864|SM00849|SSF55718|SSF56281 BD65_352 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002129|IPR010977|IPR015421|IPR015422|IPR015424|IPR021115 Aromatic-L-amino-acid decarboxylase|Pyridoxal phosphate-dependent decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|Pyridoxal-phosphate binding site GO:0003824|GO:0006520|GO:0016831|GO:0019752|GO:0030170 G3DSA:1.20.1340.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00282|PR00800|PS00392|SSF53383 BD65_353 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016946 Uncharacterised conserved protein UCP030125 PIRSF030125 BD65_354 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:3.90.79.10 BD65_356 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006439|IPR011951|IPR023198|IPR023214|IPR036412 HAD hydrolase, subfamily IA|HAD superfamily|HAD-like superfamily|HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB|Phosphoglycolate phosphatase-like, domain 2 GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01549|TIGR02254 BD65_357 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007791|IPR025266|IPR028932|IPR029024 Co-chaperone DjlA, N-terminal|TerB, N-terminal|TerB-C domain|TerB-like G3DSA:1.10.3680.10|PF05099|PF13208|PF15615|SSF158682 BD65_358 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010499|IPR011256|IPR024911|IPR029442 Bacterial transcription activator, effector binding|DNA gyrase inhibitor GyrI|GyrI-like small molecule binding domain|Regulatory factor, effector binding domain superfamily GO:0008657 G3DSA:3.20.80.10|MF_01896|PF06445|SM00871|SSF55136 BD65_359 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001497|IPR008332|IPR014048|IPR023546|IPR036217|IPR036388|IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily|Methylated DNA-protein cysteine methyltransferase, DNA binding domain|Methylated-DNA--protein-cysteine methyltransferase|Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-like DNA-binding domain superfamily GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|MF_00772|PF01035|PF02870|PS00374|SSF46767|SSF53155|TIGR00589 BD65_360 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000595|IPR012318|IPR014710|IPR018335|IPR018490|IPR036388|IPR036390 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|SM00100|SM00419|SSF46785|SSF51206 BD65_361 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006016 UspA G3DSA:3.40.50.12370|PF00582|SSF52402 BD65_362 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR036237 Xylose isomerase-like superfamily SSF51658 BD65_363 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012136|IPR029035|IPR034300 DHS-like NAD/FAD-binding domain superfamily|NADP transhydrogenase beta-like domain|NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 G3DSA:3.40.50.1220|PF02233|PIRSF000204|SSF52467 BD65_364 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007698|IPR007886|IPR008142|IPR008143|IPR024605|IPR026255|IPR036291 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|NAD(P) transhydrogenase, alpha subunit|NAD(P) transhydrogenase, alpha subunit, C-terminal|NAD(P)-binding domain superfamily GO:0008746|GO:0016491|GO:0055114|GO:1902600 G3DSA:3.40.50.720|PF01262|PF05222|PF12769|PIRSF000203|PS00836|PS00837|SM01002|SM01003|SSF51735|SSF52283|TIGR00561 BD65_366 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010854|IPR025539|IPR025543|IPR036275 Dodecin-like|Domain of unknown function DUF1471|YdgH protein|YdgH-like superfamily G3DSA:3.30.1660.10|PF07338|PIRSF014774|SSF159871 BD65_367 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004754 Amino acid antiporter|Amino acid/polyamine transporter I GO:0006865|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF13520|PIRSF006060|TIGR00905 BD65_37 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000109|IPR005279|IPR018456|IPR036259 Dipeptide/tripeptide permease|MFS transporter superfamily|PTR2 family proton/oligopeptide symporter, conserved site|Proton-dependent oligopeptide transporter family GO:0005215|GO:0006857|GO:0015833|GO:0016020|GO:0022857|GO:0055085|GO:1904680 G3DSA:1.20.1250.20|PF00854|PS01022|PS01023|SSF103473|TIGR00924 BD65_370 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001867|IPR011006|IPR036388 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BD65_371 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR036097|IPR036890 HAMP domain|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF02518|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 BD65_372 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001424|IPR018152|IPR036423 Superoxide dismutase, copper/zinc binding domain|Superoxide dismutase, copper/zinc, binding site|Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:2.60.40.200|PF00080|PS00087|SSF49329 BD65_373 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BD65_374 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeobox-like domain superfamily GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PS00041|SM00342|SSF46689 BD65_375 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005247|IPR008914|IPR036610 PEBP-like superfamily|Phosphatidylethanolamine-binding protein|YbhB/YbcL G3DSA:3.90.280.10|PF01161|SSF49777|TIGR00481 BD65_376 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000036|IPR020079|IPR020080 Outer membrane adhesin/peptidase omptin|Peptidase A26, omptin|Peptidase A26, omptin, conserved site GO:0004175|GO:0004190|GO:0006508|GO:0009279 G3DSA:2.40.128.90|PF01278|PIRSF001522|PR00482|PS00834|SSF69917 BD65_378 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001254|IPR008256|IPR009003|IPR018114|IPR033116 Peptidase S1, PA clan|Peptidase S1B|Serine proteases, trypsin domain|Serine proteases, trypsin family, histidine active site|Serine proteases, trypsin family, serine active site GO:0004252|GO:0006508|GO:0008236 G3DSA:2.40.10.10|PF00089|PR00839|PS00134|PS00135|SM00020|SSF50494 BD65_38 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related PF03795|SSF54909 BD65_380 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001650|IPR003593|IPR007502|IPR010222|IPR011545|IPR011709|IPR014001|IPR024590|IPR027417 AAA+ ATPase domain|DEAD/DEAH box helicase domain|Domain of unknown function DUF1605|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase HrpA|RNA helicase HrpA, C-terminal GO:0003676|GO:0004004|GO:0004386|GO:0005524 G3DSA:1.20.120.1080|G3DSA:3.40.50.300|PF00270|PF00271|PF04408|PF07717|PF11898|SM00382|SM00487|SM00490|SM00847|SSF52540|TIGR01967 BD65_381 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003680|IPR023048|IPR029039 Flavodoxin-like fold|Flavoprotein-like superfamily|NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 G3DSA:3.40.50.360|MF_01216|PF02525|SSF52218 BD65_382 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008309 Uncharacterised conserved protein UCP025560 PF07027|PIRSF025560 BD65_383 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025985 YnbE-like lipoprotein PD052969|PF13617 BD65_384 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010499|IPR011256|IPR029441 Bacterial transcription activator, effector binding|Integron-associated effector binding protein|Regulatory factor, effector binding domain superfamily G3DSA:3.20.80.10|PF14526|SM00871|SSF55136 BD65_385 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021730 Dicarboxylate transport PF11739 BD65_386 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006139|IPR006140|IPR029752|IPR029753|IPR036291 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain superfamily GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|PS00671|SSF51735|SSF52283 BD65_387 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005184|IPR038670 Domain of unknown function DUF306, Meta/HslJ|HslJ-like superfamily G3DSA:2.40.128.270|PF03724 BD65_388 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005590 Protein of unknown function DUF333 PF03891 BD65_389 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PF02308|PR01837 BD65_39 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004960|IPR011920 Bacterial lipid A biosynthesis acyltransferase|Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 MF_01942|PF03279|PIRSF026649|TIGR02207 BD65_390 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000390 Small multidrug resistance protein family GO:0016021 G3DSA:1.10.3730.20|PF00893|SSF103481 BD65_391 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002869|IPR002880|IPR009014|IPR011766|IPR011895|IPR017900|IPR019456|IPR019752|IPR029061|IPR033412|IPR037112 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate-flavodoxin oxidoreductase|Pyruvate-flavodoxin oxidoreductase, EKR domain|Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0005506|GO:0016491|GO:0016903|GO:0022900|GO:0030976|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.40.50.920|G3DSA:3.40.50.970|G3DSA:3.40.920.10|G3DSA:4.10.780.10|PF01558|PF01855|PF02775|PF10371|PF13484|PF17147|PIRSF000159|PS00198|SM00890|SSF52518|SSF52922|SSF53323|SSF54862|TIGR02176 BD65_392 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011063|IPR012089|IPR014729|IPR035107 Rossmann-like alpha/beta/alpha sandwich fold|tRNA thiolation protein, TtcA/Ctu1 type|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal|tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 G3DSA:3.40.50.620|MF_01850|PF01171|PIRSF004976|SSF52402 BD65_393 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|G3DSA:3.30.460.20|PF01544|SSF143865|SSF144083 BD65_394 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BD65_395 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 G3DSA:3.40.630.10|PF00246|SSF53187 BD65_396 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013341|IPR013342|IPR018110|IPR029017|IPR029065|IPR036849 Enolase C-terminal domain-like|Enolase-like, C-terminal domain superfamily|Enolase-like, N-terminal|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PS00909|SM00922|SSF51604|SSF54826 BD65_397 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002065|IPR013740|IPR018219|IPR036249 Redoxin|Thiol peroxidase Tpx|Thiol peroxidase conserved site|Thioredoxin-like superfamily GO:0008379|GO:0016209|GO:0016491|GO:0016684|GO:0055114 G3DSA:3.40.30.10|MF_00269|PF08534|PS01265|SSF52833 BD65_398 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR002078|IPR003593|IPR009057|IPR013767|IPR025662|IPR025943|IPR025944|IPR027417|IPR030828|IPR035965 AAA+ ATPase domain|Homeobox-like domain superfamily|P-loop containing nucleoside triphosphate hydrolase|PAS domain|PAS domain superfamily|PAS fold|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|TyrR family, helix-turn-helix domain GO:0003677|GO:0005524|GO:0006355|GO:0008134 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.30.70.260|G3DSA:3.40.50.300|PF00158|PF00989|PS00675|PS00676|PS00688|SM00091|SM00382|SSF46689|SSF52540|SSF55021|SSF55785|TIGR04381 BD65_399 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011979|IPR024467 Conserved hypothetical protein CHP02293|Domain of unknown function DUF2384 PF09722|TIGR02293 BD65_4 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001041|IPR005302|IPR005303|IPR006058|IPR011037|IPR012675|IPR036010 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-like superfamily|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain superfamily|MOSC, N-terminal beta barrel|Molybdenum cofactor sulfurase, C-terminal|Pyruvate kinase-like, insert domain superfamily GO:0003824|GO:0009055|GO:0030151|GO:0030170|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PF03473|PF03476|PS00197|SSF141673|SSF50800|SSF54292 BD65_40 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001763|IPR020936|IPR022111|IPR036873 Rhodanase, C-terminal|Rhodanese-like domain|Rhodanese-like domain superfamily|Uncharacterised protein family UPF0176 G3DSA:3.30.70.100|G3DSA:3.40.250.10|MF_00469|PF00581|PF12368|SM00450|SSF52821 BD65_400 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014914 RES domain PF08808|SM00953 BD65_401 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006507|IPR021147 Protein of unknown function DUF697|Uncharacterised protein family UPF0283 MF_01085|PF05128|TIGR01620 BD65_402 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007413|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF463, YcjX-like protein PF04317|PIRSF019381|SSF52540 BD65_403 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014321 Phage shock protein, PspD PF09584|TIGR02979 BD65_404 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007168|IPR014320 Phage shock protein, PspC|Phage shock protein, PspC, N-terminal PF04024|TIGR02978 BD65_405 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009554 Phage shock protein B GO:0006355|GO:0009271 PF06667|TIGR02976 BD65_406 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007157|IPR014319 Phage shock protein, PspA|PspA/IM30 PF04012|TIGR02977 BD65_407 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR014317|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeobox-like domain superfamily|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Transcription activator PspF GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00676|PS00688|SM00382|SSF46689|SSF52540|TIGR02974 BD65_409 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 G3DSA:3.90.210.10|PF02917|PR01395|SSF56399 BD65_41 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BD65_410 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|SSF53850 BD65_411 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 PF00528|SSF161098 BD65_412 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR025966|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Oligopeptide transport permease C-like, N-terminal domain GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BD65_413 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR013563|IPR027417 AAA+ ATPase domain|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|SM00382|SSF52540|TIGR01727 BD65_414 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_415 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR014358|IPR036291 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|SSF51735 BD65_416 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000109|IPR005279|IPR018456|IPR023517|IPR036259 Amino acid/peptide transporter family, dipeptide and tripeptide permease A|Dipeptide/tripeptide permease|MFS transporter superfamily|PTR2 family proton/oligopeptide symporter, conserved site|Proton-dependent oligopeptide transporter family GO:0005215|GO:0006857|GO:0015833|GO:0016020|GO:0022857|GO:0055085|GO:1904680 G3DSA:1.20.1250.20|MF_01878|PF00854|PS01023|SSF103473|TIGR00924 BD65_417 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:1.10.1660.10|PF13591 BD65_418 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001623|IPR002939|IPR008971|IPR018253|IPR036869 Chaperone DnaJ, C-terminal|Chaperone J-domain superfamily|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:1.20.5.460|G3DSA:2.60.260.20|PF00226|PF01556|PR00625|PS00636|SM00271|SSF46565|SSF49493 BD65_42 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR016032|IPR036388 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 BD65_420 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009698 Protein of unknown function DUF1282 PF06930 BD65_422 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020317 Uncharacterised protein family YjbD PD063639|PF11656 BD65_423 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004045|IPR004046|IPR036249|IPR036282 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal domain superfamily|Glutathione S-transferase, N-terminal|Thioredoxin-like superfamily GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BD65_424 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004625|IPR013749|IPR023685|IPR029056 Pyridoxal kinase PdxY|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Pyridoxine kinase|Ribokinase-like GO:0008478|GO:0009443 G3DSA:3.40.1190.20|MF_01639|PF08543|SSF53613|TIGR00687 BD65_425 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024107|IPR036986 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|RNA-binding S4 domain superfamily|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02006|PF00579|PF01479|PR01040|PS00178|SM00363|SSF52374|SSF55174|TIGR00234 BD65_426 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000659|IPR011576|IPR012349|IPR019576|IPR019740 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase|Pyridoxamine 5'-phosphate oxidase, conserved site|Pyridoxamine 5'-phosphate oxidase, putative|Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0004733|GO:0008615|GO:0010181|GO:0016638|GO:0048037|GO:0055114 G3DSA:2.30.110.10|MF_01629|PF01243|PF10590|PIRSF000190|PS01064|SSF50475|TIGR00558 BD65_427 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 G3DSA:3.30.420.40|MF_01270|PF03702|SSF53067 BD65_428 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008816 Glycine zipper 2TM domain GO:0019867 PF05433 BD65_429 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000835|IPR023071|IPR023187|IPR036388|IPR036390 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Transcriptional regulator, SlyA|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|MF_01819|PF01047|PR00598|PS01117|SM00347|SSF46785 BD65_43 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006076|IPR023493|IPR036188 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain superfamily|N-methyl-L-tryptophan oxidase MTOX GO:0016491|GO:0050131|GO:0050660|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|MF_00515|PF01266|SSF51905|SSF54373 BD65_431 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020471|IPR023210|IPR036812 Aldo/keto reductase|NADP-dependent oxidoreductase domain|NADP-dependent oxidoreductase domain superfamily GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|SSF51430 BD65_432 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010710 Protein of unknown function DUF1289 PF06945 BD65_433 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000917|IPR012549|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain superfamily|Phosphoethanolamine transferase, N-terminal|Sulfatase, N-terminal GO:0003824|GO:0008484|GO:0016021 G3DSA:3.40.720.10|PF00884|PF08019|SSF53649 BD65_434 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001647|IPR009057|IPR011075|IPR036271 DNA-binding HTH domain, TetR-type|Homeobox-like domain superfamily|Tetracyclin repressor-like, C-terminal domain superfamily|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF16925|SSF46689|SSF48498 BD65_435 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|SSF51395 BD65_436 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004360|IPR004361|IPR018146|IPR029068 Glyoxalase I|Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|SSF54593|TIGR00068 BD65_437 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005987|IPR012337|IPR013520|IPR036397 Exonuclease, RNase T/DNA polymerase III|Ribonuclease H superfamily|Ribonuclease H-like superfamily|Ribonuclease T GO:0003676|GO:0004540|GO:0006396 G3DSA:3.30.420.10|MF_00157|PF00929|SM00479|SSF53098|TIGR01298 BD65_438 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002109|IPR004480|IPR014434|IPR036249 Glutaredoxin|Monothiol glutaredoxin|Monothiol glutaredoxin-related|Thioredoxin-like superfamily GO:0009055|GO:0015035|GO:0015036|GO:0045454 G3DSA:3.40.30.10|PF00462|PIRSF005894|SSF52833|TIGR00365 BD65_439 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000064|IPR038765 Endopeptidase, NLPC/P60 domain|Papain-like cysteine peptidase superfamily G3DSA:3.90.1720.10|PF00877|SSF54001 BD65_44 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025730 Biofilm regulator BssS PD060858|PF13991 BD65_440 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001189|IPR019831|IPR019832|IPR019833|IPR036314|IPR036324 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, C-terminal domain superfamily|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, N-terminal domain superfamily|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|G3DSA:2.40.500.20|PF00081|PF02777|PIRSF000349|PR01703|PS00088|SSF46609|SSF54719 BD65_442 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000843|IPR010982|IPR023588|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain superfamily|Periplasmic binding protein-like I|Transcription regulator HTH, PurR GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|MF_01277|PF00356|PF13377|PR00036|PS00356|SM00354|SSF47413|SSF53822 BD65_443 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BD65_444 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004812|IPR011701|IPR036259 Drug resistance transporter Bcr/CmlA subfamily|MFS transporter superfamily|Major facilitator superfamily GO:0006855|GO:0015238|GO:0016021|GO:0055085 G3DSA:1.20.1720.10|PF07690|SSF103473|TIGR00710 BD65_445 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003333|IPR029063 Mycolic acid cyclopropane synthase|S-adenosyl-L-methionine-dependent methyltransferase GO:0008610 G3DSA:3.40.50.150|PF02353|PIRSF003085|SSF53335 BD65_446 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha, N-terminal domain-like superfamily|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel G3DSA:2.40.30.20|PF00677|PIRSF000498|SSF63380|TIGR00187 BD65_447 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002528|IPR022913 Multi antimicrobial extrusion protein|Multidrug resistance protein MdtK GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 MF_00400|PF01554|PIRSF006603|TIGR00797 BD65_45 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010391|IPR036687 DNA damage-inducible protein DinI-like|DinI-like superfamily G3DSA:3.30.910.10|PF06183|SSF54857 BD65_451 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001697|IPR011037|IPR015793|IPR015795|IPR015806|IPR015813|IPR018209|IPR036918 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, C-terminal domain superfamily|Pyruvate kinase, active site|Pyruvate kinase, barrel|Pyruvate kinase, insert domain superfamily|Pyruvate kinase-like, insert domain superfamily|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|SSF50800|SSF51621|SSF52935|TIGR01064 BD65_452 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006817|IPR016367 Lipoprotein leucine-zipper|Murein-lipoprotein GO:0019867 G3DSA:1.20.5.190|PF04728|PIRSF002855|SSF58042 BD65_453 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005490|IPR038063 L,D-transpeptidase catalytic domain|L,D-transpeptidase catalytic domain-like GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BD65_454 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003808|IPR023939 Cysteine desulfuration protein SufE|Fe-S metabolism associated domain, SufE-like GO:0006790|GO:0016226 G3DSA:3.90.1010.10|MF_01832|PF02657|SSF82649 BD65_455 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000192|IPR010970|IPR015421|IPR015422|IPR015424|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase, SufS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0006534|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PS00595|SSF53383|TIGR01979 BD65_456 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000825|IPR011542|IPR037284 SUF system FeS cluster assembly, SufBD|SUF system FeS cluster assembly, SufBD superfamily|SUF system FeS cluster assembly, SufD GO:0016226 PF01458|SSF101960|TIGR01981 BD65_457 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR010230|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|FeS cluster assembly SUF system, ATPase SufC|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR01978 BD65_458 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000825|IPR010231|IPR037284 SUF system FeS cluster assembly, SufB|SUF system FeS cluster assembly, SufBD|SUF system FeS cluster assembly, SufBD superfamily GO:0016226 PF01458|SSF101960|TIGR01980 BD65_459 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000361|IPR016092|IPR017870|IPR035903 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site|HesB-like domain superfamily GO:0005198|GO:0051536|GO:0097428 G3DSA:2.60.300.12|PF01521|PS01152|SSF89360|TIGR00049 BD65_46 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002195|IPR004721|IPR006680|IPR032466 Amidohydrolase-related|Dihydroorotase homodimeric type|Dihydroorotase, conserved site|Metal-dependent hydrolase GO:0004151|GO:0016787|GO:0016812|GO:0019856 G3DSA:3.20.20.140|MF_00219|PF01979|PIRSF001237|PS00483|SSF51556|TIGR00856 BD65_461 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain superfamily|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BD65_462 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004113|IPR006094|IPR009051|IPR016164|IPR017896|IPR017900|IPR036318 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|FAD linked oxidase, N-terminal|FAD-binding, type PCMH-like superfamily|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal GO:0003824|GO:0016491|GO:0050660|GO:0051536|GO:0055114 G3DSA:3.30.465.40|PF01565|PF02913|PF13183|PS00198|SSF46548|SSF55103|SSF56176 BD65_463 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BD65_464 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000121|IPR002192|IPR006319|IPR008279|IPR013815|IPR015813|IPR018274|IPR023151|IPR036637 ATP-grasp fold, subdomain 1|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphoenolpyruvate synthase|Phosphohistidine domain superfamily|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824|GO:0005524|GO:0006090|GO:0008986|GO:0016301|GO:0016310|GO:0016772 G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000854|PS00370|PS00742|SSF51621|SSF52009|SSF56059|TIGR01418 BD65_465 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005177|IPR008917|IPR026530 Bifunctional kinase-pyrophosphorylase|Phosphoenolpyruvate synthase regulatory protein|Transcription factor, Skn-1-like, DNA-binding domain superfamily GO:0003677|GO:0005524|GO:0006355|GO:0016772 MF_01062|PF03618|SSF47454 BD65_466 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PIRSF001361|SSF51569|TIGR00034 BD65_467 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000531|IPR010916|IPR010949|IPR011276|IPR012910|IPR036942|IPR037066 TonB box, conserved site|TonB-dependent haem/haemoglobin receptor|TonB-dependent haemoglobin/transferrin/lactoferrin receptor|TonB-dependent receptor, plug domain|TonB-dependent receptor, plug domain superfamily|TonB-dependent receptor-like, beta-barrel|TonB-dependent receptor-like, beta-barrel domain superfamily GO:0015232|GO:0015886|GO:0019867|GO:0022857|GO:0055085 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS00430|SSF56935|TIGR01785|TIGR01786 BD65_468 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 G3DSA:3.40.1570.10|PF05171|SSF144064 BD65_469 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002491 ABC transporter periplasmic binding domain G3DSA:3.40.50.1980|PF01497|SSF53807 BD65_47 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.100|PF03992|SSF54909 BD65_470 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000522|IPR037294 ABC transporter, BtuC-like|ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 BD65_471 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_472 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003846 Uncharacterised protein family UPF0061 MF_00692|PF02696 BD65_473 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004143|IPR004562|IPR019491|IPR023741 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Lipoate protein ligase, C-terminal|Lipoate-protein ligase A|Lipoyltransferase/lipoate-protein ligase GO:0006464|GO:0009249|GO:0016979 G3DSA:3.30.390.50|G3DSA:3.30.930.10|MF_01602|PF03099|PF10437|SSF55681|SSF82649|TIGR00545 BD65_474 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000064|IPR038765 Endopeptidase, NLPC/P60 domain|Papain-like cysteine peptidase superfamily G3DSA:3.90.1720.10|PF00877|SSF54001 BD65_475 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF G3DSA:1.10.3730.20|MF_00538|SSF103481 BD65_476 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620|IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE|EamA domain GO:0016020|GO:0016021 G3DSA:1.10.3730.20|MF_01869|PF00892|SSF103481 BD65_477 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003342|IPR022839 Glycosyl transferase family 39/83|Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0000030|GO:0006493|GO:0016020|GO:0016763 MF_01165|PF02366 BD65_478 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002509|IPR011330|IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810|GO:0016811 MF_01870|PF01522|SSF88713 BD65_479 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001509|IPR002376|IPR005793|IPR011034|IPR021168|IPR036291|IPR036477 Bifunctional polymyxin resistance protein, ArnA|Formyl transferase, C-terminal|Formyl transferase, N-terminal|Formyl transferase, N-terminal domain superfamily|Formyl transferase-like, C-terminal domain superfamily|NAD(P)-binding domain superfamily|NAD-dependent epimerase/dehydratase GO:0003824|GO:0009058|GO:0016742|GO:0050662|GO:0055114 G3DSA:3.40.50.12230|G3DSA:3.40.50.720|MF_01166|PF00551|PF01370|PF02911|PIRSF036506|SSF50486|SSF51735|SSF53328 BD65_48 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR036691 Endonuclease/exonuclease/phosphatase superfamily G3DSA:3.60.10.10|SSF56219 BD65_480 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001173|IPR022857|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases|Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 G3DSA:3.90.550.10|MF_01164|PF00535|SSF53448 BD65_481 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000653|IPR015421|IPR015422|IPR015424|IPR022850 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0003824|GO:0008483 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01167|PF01041|PIRSF000390|SSF53383 BD65_482 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR023693|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, vitamin B12, BtuD|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015889|GO:0016887 G3DSA:3.40.50.300|MF_01005|PF00005|PS00211|SM00382|SSF52540 BD65_483 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000522|IPR023691|IPR037294 ABC transporter, BtuC-like|ABC transporter, permease protein, BtuC-like|ABC transporter, vitamin B12 import, permease protein BtuC GO:0005215|GO:0015889|GO:0016020 G3DSA:1.10.3470.10|MF_01004|PF01032|SSF81345 BD65_484 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BD65_485 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006522 Phage virion morphogensis protein PF05069|TIGR01635 BD65_487 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR036597 Fido-like domain superfamily G3DSA:1.10.3290.10 BD65_488 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003812|IPR036597 Fido domain|Fido-like domain superfamily G3DSA:1.10.3290.10|PF02661|SSF140931 BD65_489 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006531|IPR013046|IPR037026 Gp5 N-terminal|Phage baseplate assembly protein V/Gp45|Vgr protein, OB-fold domain superfamily G3DSA:2.40.50.230|G3DSA:2.60.220.40|PF04717|TIGR01644 BD65_49 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003029|IPR004659|IPR012340|IPR019307|IPR021968|IPR022967|IPR028878 Nucleic acid-binding, OB-fold|Polyribonucleotide phosphorylase C-terminal|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E|Ribonuclease E/G|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006396|GO:0008995 G3DSA:2.40.50.140|G3DSA:3.40.1260.20|MF_00970|PF00575|PF10150|PF12111|SM00316|SSF50249|TIGR00757 BD65_490 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000119|IPR005684|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain superfamily|Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 G3DSA:4.10.520.10|MF_00380|PF00216|PR01727|PS00045|SM00411|SSF47729|TIGR00987 BD65_491 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825|IPR036690 B3/B4 tRNA-binding domain|Ferrodoxin-fold anticodon-binding domain|Ferrodoxin-fold anticodon-binding domain superfamily|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain superfamily|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 BD65_492 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm|Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|SSF46589|SSF55681|TIGR00468 BD65_493 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005813|IPR035566 Ribosomal protein L20|Ribosomal protein L20, C-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|G3DSA:1.10.720.90|MF_00382|PD002389|PF00453|PR00062|PS00937|SSF74731|TIGR01032 BD65_494 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001706|IPR018265|IPR021137|IPR037229 Ribosomal protein L35|Ribosomal protein L35 superfamily|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.530|MF_00514|PF01632|PR00064|PS00936|SSF143034|TIGR00001 BD65_495 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001288|IPR019815|IPR036788 Translation initiation factor 3|Translation initiation factor 3 (IF-3), C-terminal domain superfamily|Translation initiation factor 3, C-terminal GO:0003743|GO:0006413 G3DSA:3.30.110.10|PF00707|SSF55200|TIGR00168 BD65_496 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002314|IPR002320|IPR004095|IPR004154|IPR012675|IPR012676|IPR012947|IPR018163|IPR036621 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Anticodon-binding domain superfamily|Beta-grasp domain superfamily|TGS|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF02824|PF03129|PF07973|PR01047|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418 BD65_497 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012427 Protein of unknown function DUF1622 PF07784 BD65_498 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025309 KTSC domain PF13619 BD65_5 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000241|IPR002052|IPR004114|IPR017244|IPR019614|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Putative RNA methylase domain|Ribosomal RNA large subunit methyltransferase K/L|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosylmethionine-dependent methyltransferase|THUMP domain GO:0003676|GO:0003723|GO:0005737|GO:0008168|GO:0008990|GO:0031167|GO:0032259 G3DSA:3.30.2130.30|G3DSA:3.30.750.80|G3DSA:3.40.50.150|MF_01858|PF01170|PF02926|PF10672|PIRSF037618|PS00092|PS01261|SM00981|SSF53335 BD65_50 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103|IPR036986 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain superfamily|RNA-binding S4 domain|RNA-binding S4 domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|PF00849|PF01479|PS01129|SM00363|SSF55120|SSF55174|TIGR00005 BD65_503 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|TIGR00427 BD65_504 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000189|IPR008258|IPR023346 Lysozyme-like domain superfamily|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|PF01464|PS00922|SSF53955 BD65_505 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006127|IPR006128|IPR006129 Adhesin B|Adhesion lipoprotein|Periplasmic solute binding protein, ZnuA-like GO:0007155|GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|PR00690|PR00691|SSF53807 BD65_506 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_507 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001626|IPR037294 ABC transporter, BtuC-like|ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 G3DSA:1.10.3470.10|PF00950|SSF81345 BD65_508 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001626|IPR037294 ABC transporter, BtuC-like|ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 G3DSA:1.10.3470.10|PF00950|SSF81345 BD65_509 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011009|IPR016477 Fructosamine/Ketosamine-3-kinase|Protein kinase-like domain superfamily G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF03881|PIRSF006221|SSF56112 BD65_51 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0047429 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 BD65_510 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025229 YniB-like protein PD035714|PF14002 BD65_512 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006439|IPR023198|IPR023214|IPR036412 HAD hydrolase, subfamily IA|HAD superfamily|HAD-like superfamily|Phosphoglycolate phosphatase-like, domain 2 GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01509 BD65_513 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007404|IPR016956 Inner membrane protein YdjM|LexA-binding, inner membrane-associated putative hydrolase PF04307|PIRSF030780 BD65_514 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001991|IPR036458 Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|SSF118215 BD65_515 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002477|IPR002502|IPR036365|IPR036366|IPR036505 N-acetylmuramoyl-L-alanine amidase domain|N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily|PGBD superfamily|PGBD-like superfamily|Peptidoglycan binding-like GO:0008745|GO:0009253 G3DSA:1.10.101.10|G3DSA:3.40.80.10|PF01471|PF01510|SM00644|SSF47090|SSF55846 BD65_516 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005471|IPR014757|IPR029016|IPR036388|IPR036390 GAF-like domain superfamily|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BD65_517 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|G3DSA:1.20.1720.10|PF07690|PR01036|SSF103473 BD65_518 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001915|IPR022919 Peptidase M48|Peptidase M48, protease HtpX, putative GO:0004222|GO:0006508 G3DSA:3.30.2010.10|MF_00188|PF01435 BD65_519 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001478|IPR004447|IPR005151|IPR020992|IPR029045|IPR036034 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain superfamily|PDZ domain|PDZ superfamily|Tail specific protease|Tail specific protease, C-terminal GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.90.226.10|PF00595|PF03572|PF11818|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 BD65_52 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003772 Large ribosomal RNA subunit accumulation protein YceD PF02620 BD65_520 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016103|IPR023529|IPR035236|IPR036442 ProQ/FinO domain|ProQ/FinO domain superfamily|RNA chaperone ProQ|RNA chaperone ProQ, C-terminal GO:0003723|GO:0010608|GO:0033592|GO:0034057 G3DSA:1.10.1710.10|MF_00749|PF04352|PF17516|SM00945|SSF48657 BD65_521 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003018|IPR029016 GAF domain|GAF-like domain superfamily GO:0005515 G3DSA:3.30.450.40|PF13185|SM00065|SSF55781 BD65_522 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005219|IPR007498 Intermembrane transport protein PqiA-like|Intermembrane transport protein PqiA-like, Enterobacteria-type PF04403|TIGR00155 BD65_523 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003399 Mce/MlaD PF02470 BD65_524 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR000160|IPR001610|IPR013655|IPR013656|IPR029787|IPR035965 GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS domain superfamily|PAS fold-3|PAS fold-4 GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF08447|PF08448|SM00086|SM00091|SM00267|SSF55073|SSF55785|TIGR00229|TIGR00254 BD65_525 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009950 Protein of unknown function DUF1480 PD060427|PF07351 BD65_526 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007374|IPR009326|IPR015947 ASCH domain|PUA-like superfamily|Protein of unknown function DUF984 G3DSA:3.10.400.10|PF04266|PIRSF021320|SM01022|SSF88697 BD65_53 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|SSF57829|TIGR01031 BD65_530 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008517 Protein of unknown function DUF799 G3DSA:3.40.50.10610|PF05643 BD65_531 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990|IPR014508 Tetratricopeptide-like helical domain superfamily|Uncharacterised conserved protein withTPR-like repeats GO:0005515 G3DSA:1.25.40.10|PF16068|PIRSF020555 BD65_532 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005534 Curli production assembly/transport component CsgG GO:0030288 G3DSA:3.40.50.10610|PF03783|SSF52964 BD65_536 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system PF11903 BD65_537 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031552|IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily|Type II bacterial toxin-antitoxin system, ParE-like toxin G3DSA:3.30.2310.20|PF15781|SSF143011 BD65_538 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001466|IPR001586|IPR012338 Beta-lactamase, class-C active site|Beta-lactamase-related|Beta-lactamase/transpeptidase-like GO:0008800|GO:0017001|GO:0030288 G3DSA:3.40.710.10|PF00144|PS00336|SSF56601 BD65_539 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BD65_54 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003664|IPR012281 Fatty acid synthesis PlsX protein|Phospholipid biosynthesis protein, PlsX-like GO:0003824|GO:0006633|GO:0016747 G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|SSF53659|TIGR00182 BD65_540 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019648 Protein of unknown function DUF2511 PF10709 BD65_541 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008457 Copper resistance protein D GO:0016021 PF05425 BD65_542 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007348|IPR014756 CopC domain|Immunoglobulin E-set GO:0005507|GO:0042597|GO:0046688 G3DSA:2.60.40.1220|PF04234|SSF81296 BD65_543 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008331|IPR009078|IPR012347 Ferritin-like|Ferritin-like superfamily|Ferritin/DPS protein domain GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|SSF47240 BD65_544 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009052|IPR036745 DNA polymerase III-theta superfamily|DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 G3DSA:1.20.58.250|PD057609|PF06440|SSF46575 BD65_545 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000073|IPR002410|IPR005944|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Peptidase S33|Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508|GO:0008233 G3DSA:3.40.50.1820|PF00561|PIRSF006431|PR00793|SSF53474|TIGR01249 BD65_548 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012337|IPR013520|IPR036397 Exonuclease, RNase T/DNA polymerase III|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676 G3DSA:3.30.420.10|PF00929|SM00479|SSF53098 BD65_549 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001375|IPR002470|IPR023302|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Peptidase S9A, N-terminal domain|Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508|GO:0008236|GO:0070008 G3DSA:2.130.10.120|G3DSA:3.40.50.1820|PF00326|PF02897|PR00862|SSF50993|SSF53474 BD65_55 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|SSF53901|TIGR00747 BD65_551 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025603|IPR038703 YebF/Cmi superfamily|YebF/Colicin-M immunity protein G3DSA:3.10.450.300|PD077599|PF13995 BD65_552 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007374|IPR008314|IPR015947 ASCH domain|PUA-like superfamily|Uncharacterised conserved protein UCP029143 G3DSA:2.30.130.30|MF_00684|PF04266|PIRSF029143|SM01022|SSF88697 BD65_553 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009813|IPR038627 Uncharacterised protein family YebG|YebG-like superfamily G3DSA:1.10.10.710|PF07130 BD65_554 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR012677|IPR014001|IPR027417|IPR028619 ATP-dependent RNA helicase DEAD-box, conserved site|ATP-dependent RNA helicase DbpA|DEAD box helicase DbpA/CsdA, RNA-binding domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleotide-binding alpha-beta plait domain superfamily|P-loop containing nucleoside triphosphate hydrolase GO:0000027|GO:0003676|GO:0003724|GO:0005524 G3DSA:3.30.70.330|G3DSA:3.40.50.300|MF_00965|PF00270|PF00271|PF03880|PS00039|SM00487|SM00490|SSF52540 BD65_555 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003135|IPR005862|IPR011054|IPR013815|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|Formate-dependent phosphoribosylglycinamide formyltransferase|Pre-ATP-grasp domain superfamily|Rudiment single hybrid motif GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01643|PF02222|SSF51246|SSF52440|SSF56059|TIGR01142 BD65_556 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005371 Uncharacterised protein family UPF0181 MF_00507|PD026807|PF03701 BD65_557 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005801|IPR005802|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal|Para-aminobenzoate synthase, component I GO:0009058|GO:0009396 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|SSF56322|TIGR00553 BD65_558 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000059|IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase, NudL, conserved site|NUDIX hydrolase-like domain superfamily GO:0000287|GO:0009132|GO:0016787|GO:0016818|GO:0030145 G3DSA:3.90.79.10|PF00293|PS01293|SSF55811 BD65_559 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004644|IPR005130|IPR005131|IPR029009 Allosteric substrate binding domain superfamily|Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit GO:0003941|GO:0006094|GO:0051539 G3DSA:3.30.1330.90|PF03313|PF03315|SSF143548|TIGR00720 BD65_56 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase domain superfamily|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0004314|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|SM00827|SSF52151|SSF55048|TIGR00128 BD65_561 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000644|IPR005170|IPR005496|IPR016169|IPR036318 CBS domain|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|Integral membrane protein TerC|Transporter-associated domain GO:0016021|GO:0050660 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PF03741|SM01091|SSF54631|SSF56176 BD65_562 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004701|IPR004720|IPR013789|IPR018455|IPR036662|IPR036667 Phosphotransferase system, mannose family IIA component|Phosphotransferase system, mannose-type IIA component|Phosphotransferase system, mannose-type IIA component superfamily|Phosphotransferase system, sorbose subfamily IIB component|Phosphotransferase system, sorbose subfamily IIB component superfamily|Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008643|GO:0008982|GO:0009401|GO:0016021|GO:0016773 G3DSA:3.40.35.10|G3DSA:3.40.50.510|PF03610|PF03830|SSF52728|SSF53062|TIGR00824|TIGR00854 BD65_563 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 PF03609|TIGR00822 BD65_564 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 PF03613|TIGR00828 BD65_565 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009328 Protein of unknown function DUF986 MF_01071|PD091196|PF06173|PIRSF020687 BD65_566 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003810|IPR022929 Putative manganese efflux pump|Putative manganese efflux pump MntP MF_01521|PF02659 BD65_567 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003382|IPR036551 Flavin prenyltransferase-like|Flavoprotein GO:0003824 G3DSA:3.40.50.1950|PF02441|SSF52507 BD65_568 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001486|IPR009050|IPR012292 Globin-like superfamily|Globin/Protoglobin|Truncated hemoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF01152|SSF46458 BD65_569 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF00583|SSF55729 BD65_57 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR011284|IPR020904|IPR036291 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735|TIGR01830 BD65_570 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786|IPR036250|IPR037069 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase-like, C-terminal|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily|Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00073|SSF47203|SSF56645 BD65_571 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001031|IPR029058 Alpha/Beta hydrolase fold|Thioesterase GO:0009058|GO:0016788 G3DSA:3.40.50.1820|PF00975|SSF53474 BD65_572 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000172|IPR007867|IPR012132|IPR036188 FAD/NAD(P)-binding domain superfamily|Glucose-methanol-choline oxidoreductase|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.410.40|G3DSA:3.50.50.60|PF00732|PF05199|PIRSF000137|PS00623|SSF51905|SSF54373 BD65_573 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000873|IPR001242|IPR009081|IPR010071|IPR020459|IPR020845|IPR023213|IPR025110|IPR036736 ACP-like superfamily|AMP-binding|AMP-binding enzyme, C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Chloramphenicol acetyltransferase-like domain superfamily|Condensation domain|Phosphopantetheine binding ACP domain GO:0003824 G3DSA:1.10.1200.10|G3DSA:3.30.300.30|G3DSA:3.30.559.10|G3DSA:3.30.559.30|G3DSA:3.40.50.12780|PF00501|PF00550|PF00668|PF13193|PR00154|PS00455|SSF47336|SSF52777|SSF56801|TIGR01733 BD65_574 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|G3DSA:1.20.1720.10|PF07690|SSF103473 BD65_575 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001307|IPR001763|IPR001845|IPR036388|IPR036390|IPR036873 HTH ArsR-type DNA-binding domain|Rhodanese-like domain|Rhodanese-like domain superfamily|Thiosulphate sulfurtransferase, conserved site|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0004792|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.250.10|PF00581|PF12840|PR00778|PS00380|SM00418|SM00450|SSF46785|SSF52821 BD65_576 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021329 Protein of unknown function DUF2938 PF11158 BD65_578 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016718|IPR025714|IPR029063 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase|rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 G3DSA:3.40.50.150|PF13847|PIRSF018249|SSF53335 BD65_579 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001460|IPR005311|IPR012338|IPR036138|IPR037532 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, dimerisation domain superfamily|Penicillin-binding protein, transpeptidase|Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 G3DSA:3.30.450.330|G3DSA:3.40.710.10|G3DSA:3.90.1310.30|MF_02080|PF00905|PF03717|SSF56519|SSF56601 BD65_58 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003231|IPR006162|IPR009081|IPR036736 ACP-like superfamily|Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain GO:0006633 G3DSA:1.10.1200.10|MF_01217|PF00550|PS00012|SSF47336|TIGR00517 BD65_580 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003730|IPR011324|IPR038371 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase|Multi-copper polyphenol oxidoreductase superfamily G3DSA:3.60.140.10|PF02578|SSF64438|TIGR00726 BD65_581 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock domain|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BD65_582 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019672 Protein of unknown function DUF2627 PF10736 BD65_583 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009746|IPR011250 Antimicrobial peptide resistance/lipid A acylation PagP|Outer membrane protein/outer membrane enzyme PagP, beta-barrel G3DSA:2.40.160.20|MF_00837|PD103779|PF07017|SSF56925 BD65_584 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0006865|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF00324|PIRSF006060|PS00218 BD65_585 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025135 Protein of unknown function DUF4060 PF13269 BD65_586 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019701 Bacteriophage P22, NinX PF10765 BD65_587 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025594 YebO-like protein PF13974 BD65_588 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025611 YobH-like protein PF13996 BD65_589 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020262 Uncharacterised protein family YecJ PD060536|PF10964 BD65_59 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|SM00825|SSF53901|TIGR03150 BD65_591 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeobox-like domain superfamily|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BD65_593 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004754 Amino acid antiporter|Amino acid/polyamine transporter I GO:0006865|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF13520|PIRSF006060|TIGR00905 BD65_594 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 BD65_595 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000687|IPR011009|IPR018935 Protein kinase-like domain superfamily|RIO kinase|RIO kinase, conserved site GO:0004674|GO:0005524 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF01163|PS01245|SM00090|SSF56112 BD65_596 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR000160|IPR001610|IPR013655|IPR029787|IPR035965 GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS domain superfamily|PAS fold-3 GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF08447|PF13426|SM00086|SM00091|SM00267|SSF55073|SSF55785|TIGR00229|TIGR00254 BD65_597 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005135|IPR036691 Endonuclease/exonuclease/phosphatase|Endonuclease/exonuclease/phosphatase superfamily G3DSA:3.60.10.10|PF03372|SSF56219 BD65_598 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003558|IPR035992 Cytolethal distending toxin A/C|Ricin B-like lectins GO:0009405 G3DSA:2.80.10.50|PF03498|SSF50370 BD65_599 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010486|IPR028623|IPR038303 HNS-dependent expression A/B|HNS-dependent expression A/B superfamily|HNS-dependent expression B GO:0009268|GO:0051082 G3DSA:1.10.890.10|MF_00947|PD070929|PF06411 BD65_6 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781|IPR037118 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase|Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0003677|GO:0004832|GO:0005524|GO:0005737|GO:0006438|GO:0016887 G3DSA:1.10.287.380|G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|SM00382|SSF52540 BD65_60 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001544|IPR017824|IPR018300|IPR036038 Aminodeoxychorismate lyase, class IV|Aminotransferase class IV|Aminotransferase, class IV, conserved site|Aminotransferase-like, PLP-dependent enzymes GO:0003824|GO:0008696|GO:0030170|GO:0046656 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|SSF56752|TIGR03461 BD65_600 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain superfamily GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PIRSF039102|PS00843|PS00844|SSF52440|SSF56059|TIGR01205 BD65_601 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF13673|SSF55729 BD65_603 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BD65_604 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock domain|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BD65_607 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006879|IPR011330|IPR022948 Carbohydrate deacetylase YdjC-like|Chitooligosaccharide deacetylase ChbG-like, bacteria|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0000272|GO:0003824|GO:0005975|GO:0016811 G3DSA:3.20.20.370|MF_01246|PF04794|SSF88713 BD65_608 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR011051|IPR013096|IPR014710|IPR018060|IPR018062|IPR020449 Cupin 2, conserved barrel|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeobox-like domain superfamily|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF07883|PF12833|PR00032|PS00041|SM00342|SSF46689|SSF51182 BD65_609 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003188|IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit|Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 G3DSA:1.20.58.280|PF02255|PIRSF000699|SSF46973 BD65_61 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003770 Endolytic murein transglycosylase G3DSA:3.30.160.60|MF_02065|PF02618|TIGR00247 BD65_610 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001360|IPR017853|IPR018120 Glycoside hydrolase family 1|Glycoside hydrolase family 1, active site|Glycoside hydrolase superfamily GO:0004553|GO:0005975 G3DSA:3.20.20.80|PF00232|PR00131|PS00572|SSF51445 BD65_611 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003352|IPR004501|IPR004796 Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 3|Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016020|GO:0016021 PF02378|PIRSF006351|TIGR00359|TIGR00410 BD65_612 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003501|IPR036095 PTS system IIB component-like superfamily|Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 G3DSA:3.40.50.2300|PF02302|SSF52794 BD65_613 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103|IPR036986 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain superfamily|RNA-binding S4 domain|RNA-binding S4 domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|G3DSA:3.30.70.1560|G3DSA:3.30.70.580|PF00849|PF01479|PS01149|SM00363|SSF55120|SSF55174|TIGR00093 BD65_614 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018636 Protein of unknown function DUF2058 PF09831 BD65_616 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PF03553 BD65_617 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF13520|PIRSF006060 BD65_618 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003876 Arginine deiminase GO:0006527|GO:0016990 G3DSA:1.10.3930.10|G3DSA:3.75.10.10|MF_00242|PF02274|PIRSF006356|PR01466|SSF55909|TIGR01078 BD65_62 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR018094|IPR018095|IPR027417|IPR039430 P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase|Thymidylate kinase, conserved site|Thymidylate kinase-like domain GO:0004798|GO:0005524|GO:0006233 G3DSA:3.40.50.300|MF_00165|PF02223|PS01331|SSF52540|TIGR00041 BD65_621 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006145|IPR006224|IPR020103 Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.2350.10|PF00849|PS01129|SSF55120 BD65_622 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002129|IPR010107|IPR015421|IPR015424|IPR021115 Glutamate decarboxylase|Pyridoxal phosphate-dependent decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major domain|Pyridoxal-phosphate binding site GO:0003824|GO:0004351|GO:0006536|GO:0016831|GO:0019752|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.160|PF00282|PS00392|SSF53383|TIGR01788 BD65_623 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR022520 Amino acid/polyamine transporter I|Putative glutamate/gamma-aminobutyrate antiporter GO:0016020|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF13520|PIRSF006060|TIGR03813 BD65_624 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012338|IPR015868 Beta-lactamase/transpeptidase-like|Glutaminase GO:0004359|GO:0006541 G3DSA:3.40.710.10|MF_00313|PF04960|SSF56601|TIGR03814 BD65_625 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013099 Potassium channel domain G3DSA:1.10.287.70|PF07885|SSF81324 BD65_626 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001223|IPR017853 Glycoside hydrolase family 18, catalytic domain|Glycoside hydrolase superfamily GO:0005975 G3DSA:3.20.20.80|PF00704|SSF51445 BD65_627 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031837|IPR038692 Cthe_2751-like superfamily|Domain of unknown function DUF5071 G3DSA:1.25.40.750|PF16804 BD65_629 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF13673|SSF55729 BD65_63 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004622|IPR008921|IPR015199|IPR027417 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta prime subunit|DNA polymerase III, delta subunit, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF09115|PF13177|SSF48019|SSF52540|TIGR00678 BD65_630 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002686|IPR036515 Transposase IS200-like|Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|SM01321|SSF143422 BD65_631 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR036188 FAD/NAD(P)-binding domain superfamily G3DSA:3.50.50.60|PF13450|SSF51905 BD65_632 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009056|IPR014353|IPR036909 Cytochrome c-like domain|Cytochrome c-like domain superfamily|Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016020|GO:0016614|GO:0020037 G3DSA:1.10.760.10|PF13442|PIRSF000018|SSF46626 BD65_634 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006061|IPR026045 Ferric binding protein|Solute-binding family 1, conserved site GO:0055085 G3DSA:3.40.190.10|PF13343|PIRSF002825|PS01037|SSF53850 BD65_635 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_636 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR008995|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF50331|SSF52540 BD65_64 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised hydrolase TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01091|PS01137|SSF51556|TIGR00010 BD65_640 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003122|IPR003660|IPR004089|IPR004090|IPR035440 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor Tar-related, ligand-binding|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Methyl-accepting chemotaxis protein, four helix bundle domain superfamily GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF02203|PR00260|SM00283|SM00304|SSF47170|SSF58104 BD65_642 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002514|IPR009057 Homeobox-like domain superfamily|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BD65_643 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001584|IPR012337|IPR025948|IPR036397 HTH-like domain|Integrase, catalytic core|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|SSF53098 BD65_647 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 G3DSA:1.20.120.1760|PF01066|PIRSF000847|PS00379|TIGR00560 BD65_648 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000305|IPR001162|IPR001943|IPR004791|IPR010994|IPR035901|IPR036876|IPR038476 GIY-YIG endonuclease|GIY-YIG endonuclease superfamily|RuvA domain 2-like|UVR domain|UVR domain superfamily|UvrABC system, subunit C|UvrC family homology region|UvrC homology region 2 superfamily GO:0005515|GO:0006289|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.30.420.340|G3DSA:3.40.1440.10|MF_00203|PF01541|PF02151|PF08459|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 BD65_649 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR001789|IPR011006|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal GO:0000160|GO:0003677|GO:0006355 G3DSA:3.40.50.12740|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BD65_65 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001996|IPR003352|IPR004719|IPR011299|IPR018113|IPR036878 Glucose permease domain IIB|PTS system glucose-specific IIBC component|Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1|Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0005355|GO:0008982|GO:0009401|GO:0016020|GO:0016021|GO:1904659 G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|SSF55604|TIGR00826|TIGR00852|TIGR02002 BD65_650 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic PF10769 BD65_651 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002347|IPR020904|IPR036291 NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BD65_653 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0006865|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF00324|PIRSF006060|PS00218 BD65_654 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000310|IPR005308|IPR008286|IPR011193|IPR015421|IPR015422|IPR015424|IPR036633 Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, C-terminal domain superfamily|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0005737|GO:0006520|GO:0016831 G3DSA:3.40.50.2300|G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|SSF53383|SSF55904 BD65_655 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004754 Amino acid antiporter|Amino acid/polyamine transporter I GO:0006865|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF13520|PIRSF006060|TIGR00905 BD65_656 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001867|IPR011990|IPR016032|IPR036388 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.11830|PF00486|SM00862|SSF46894 BD65_657 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001734|IPR011851|IPR018212|IPR038377 Sodium/glucose symporter superfamily|Sodium/proline symporter|Sodium/solute symporter|Sodium/solute symporter, conserved site GO:0005298|GO:0006814|GO:0015824|GO:0016020|GO:0016021|GO:0022857|GO:0031402|GO:0055085 G3DSA:1.20.1730.10|PF00474|PS00456|PS00457|TIGR00813|TIGR02121 BD65_658 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002872|IPR005933|IPR010985|IPR013321|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR024082|IPR024089|IPR024090|IPR025703|IPR029041|IPR029510 Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase|Arc-type ribbon-helix-helix|Bifunctional protein PutA|Delta-1-pyrroline-5-carboxylate dehydrogenase 3|FAD-linked oxidoreductase-like|Proline dehydrogenase PutA, domain I|Proline dehydrogenase PutA, domain I/II|Proline dehydrogenase PutA, domain II|Proline dehydrogenase domain|Ribbon-helix-helix GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0006561|GO:0010133|GO:0016491|GO:0016620|GO:0055114 G3DSA:1.10.1220.10|G3DSA:1.20.5.550|G3DSA:3.20.20.220|G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PF01619|PF14850|PIRSF000197|PS00070|PS00687|SSF47598|SSF51730|SSF53720|SSF81935|TIGR01238 BD65_659 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BD65_66 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001310|IPR019808|IPR036265 HIT-like superfamily|Histidine triad (HIT) protein|Histidine triad, conserved site G3DSA:3.30.428.10|PF01230|PR00332|PS00892|SSF54197 BD65_660 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR010065|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|MetI-like superfamily GO:0016020|GO:0016021|GO:0022857|GO:0043190|GO:0055085|GO:0071705 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BD65_661 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001320|IPR001638|IPR018313 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0004970|GO:0016020 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SM00079|SSF53850 BD65_662 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001926|IPR005966|IPR023702|IPR027278|IPR036052 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase|D-cysteine desulfhydrase|D-cysteine desulphhydrase, bacterial|Pyridoxal-phosphate dependent enzyme|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0003824|GO:0019148 G3DSA:3.40.50.1100|MF_01045|PF00291|PIRSF006278|SSF53686|TIGR01275 BD65_663 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004107|IPR022523 Flagellar regulator, FliZ|Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PF02899|TIGR03823 BD65_664 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR012845|IPR013324|IPR013325|IPR014284|IPR028617 RNA polymerase sigma factor FliA|RNA polymerase sigma factor, FliA/WhiG|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4-like|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.1740.10|G3DSA:1.20.140.160|MF_00962|PF04539|PF04542|PF04545|PIRSF000770|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02479|TIGR02937 BD65_665 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.10.8.410|G3DSA:1.20.1330.10|G3DSA:1.20.58.1830|G3DSA:3.30.70.3070|PF00669|PF00700|PR00207|SSF64518 BD65_666 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.10.8.410|G3DSA:1.20.1330.10|G3DSA:1.20.58.1830|G3DSA:2.170.280.10|G3DSA:2.30.220.10|PF00669|PF00700|PR00207|SSF64518 BD65_667 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.10.8.410|G3DSA:1.20.1330.10|G3DSA:1.20.58.1830|G3DSA:2.170.280.10|G3DSA:2.30.220.10|PF00669|PF00700|PR00207|SSF64518 BD65_668 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003481|IPR010809|IPR010810 Flagellar hook-associated protein 2, C-terminal|Flagellar hook-associated protein 2, N-terminal|Flagellin hook, IN motif GO:0006928|GO:0007155|GO:0009288|GO:0009424|GO:0044781 PF02465|PF07195|PF07196 BD65_669 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003713|IPR036584 Flagellar protein FliS|Flagellar protein FliS superfamily GO:0044780 G3DSA:1.20.120.340|PF02561|PIRSF039090|SSF101116|TIGR00208 BD65_67 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010824|IPR038483 Protein of unknown function DUF1425|YcfL-like superfamily G3DSA:2.60.40.3230|PF07233 BD65_670 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008622 Flagellar protein FliT G3DSA:1.20.58.380|MF_01180|PF05400 BD65_671 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeobox-like domain superfamily GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342|SSF46689 BD65_672 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003607|IPR029151|IPR033479 Double Cache domain 1|HD/PDEase domain|Periplasmic sensor-like domain superfamily G3DSA:1.10.3210.10|G3DSA:1.20.1480.50|G3DSA:3.30.450.20|PF02743|PF13487|SM00471|SSF103190|SSF109604 BD65_673 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003148|IPR013099|IPR036291 NAD(P)-binding domain superfamily|Potassium channel domain|Regulator of K+ conductance, N-terminal GO:0006813 G3DSA:1.10.287.70|G3DSA:3.40.50.720|PF02254|PF07885|SSF51735|SSF81324 BD65_674 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001604|IPR018524|IPR020821 DNA/RNA non-specific endonuclease|DNA/RNA non-specific endonuclease, active site|Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 G3DSA:3.40.570.10|PF01223|PS01070|SM00477|SM00892|SSF54060 BD65_675 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MF_00724|PF02049|PR01006|TIGR00205 BD65_676 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000067|IPR006182|IPR013556 Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF GO:0003774|GO:0009431|GO:0071973 G3DSA:3.30.300.30|PF01514|PF08345|PIRSF004862|PR01009|TIGR00206 BD65_677 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000090|IPR011002|IPR023087|IPR028263|IPR032779 Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, C-terminal|Flagellar motor switch protein FliG, N-terminal domain|Flagellar motor switch protein FliG, alpha-helical|Flagellar motor switch protein FliG, middle domain GO:0003774|GO:0006935|GO:0009288|GO:0071973 G3DSA:1.10.220.30|PF01706|PF14841|PF14842|PIRSF003161|PR00954|SSF48029|TIGR00207 BD65_678 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000563|IPR018035 Flagellar assembly protein FliH|Flagellar assembly protein FliH/Type III secretion system HrpE GO:0003774|GO:0009288|GO:0071973 PF02108|PR01003 BD65_679 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000194|IPR003593|IPR005714|IPR020003|IPR020005|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI/YscN|Flagellar export ATPase FliI, clade 1|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257|GO:0044780|GO:0071973 G3DSA:3.40.50.12240|PF00006|PS00152|SM00382|SSF52540|TIGR01026|TIGR03496 BD65_68 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014094 Penicillin-binding protein activator LpoB G3DSA:3.40.50.10610|MF_01889|PF13036|TIGR02722 BD65_680 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012823|IPR018006 Flagellar FliJ, proteobacteria|Flagellar export FliJ GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PF02050|PIRSF019404|PR01004|TIGR02473 BD65_681 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001635|IPR021136|IPR038610 Flagellar hook-length control protein FliK|Flagellar hook-length control protein-like, C-terminal|FliK-like, C-terminal domain superfamily GO:0009424|GO:0044780 G3DSA:3.30.750.140|PF02120|PR01007 BD65_682 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748 BD65_683 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001543|IPR001689|IPR028976|IPR036429 CheC-like superfamily|Flagellar motor switch protein FliM|SpoA-like superfamily|Surface presentation of antigen (SpoA) GO:0003774|GO:0009425|GO:0071973 G3DSA:3.40.1550.10|PF01052|PF02154|PIRSF002888|PR00955|SSF101801|SSF103039|TIGR01397 BD65_684 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001172|IPR001543|IPR012826|IPR031576|IPR036429 Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Flagellar motor switch protein FliN, N-terminal|SpoA-like superfamily|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020|GO:0071973 G3DSA:2.30.330.10|PF01052|PF16973|PR00956|SSF101801|TIGR02480 BD65_685 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PF04347|TIGR03500 BD65_686 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005837|IPR005838 Flagellar transport protein FliP|Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PF00813|PR00951|PR01302|PS01060|PS01061|TIGR01103 BD65_687 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002191|IPR006305 Bacterial export protein family 3|Flagellar biosynthesis protein FliQ GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF01313|PIRSF004669|PR00952|TIGR01402 BD65_688 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002010|IPR006303 Flagellar biosynthesis protein FliR|Type III secretion system inner membrane R protein GO:0006605|GO:0016020|GO:0016021|GO:0044780 PF01311|PR00953|TIGR01400 BD65_689 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001029|IPR013384 Flagellar hook-associated protein 3|Flagellin, D0/D1 domain GO:0005198|GO:0009424|GO:0071973 G3DSA:1.20.1330.10|PF00669|SSF64518|TIGR02550 BD65_69 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002575|IPR011009|IPR014093 Aminoglycoside phosphotransferase|Protein kinase-like domain superfamily|Thiamine kinase GO:0006772|GO:0016310|GO:0019165 G3DSA:3.90.1200.10|MF_01604|PF01636|SSF56112|TIGR02721 BD65_690 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001444|IPR002371|IPR010930 Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780|GO:0071973 PF00460|PF06429|PR01005|SSF64518|TIGR02492 BD65_691 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002901|IPR013377|IPR019301 Flagellar protein FlgJ, N-terminal|Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain|Peptidoglycan hydrolase FlgJ GO:0004040|GO:0016798|GO:0044780 G3DSA:1.10.530.10|G3DSA:2.10.70.40|PF01832|PF10135|PR01002|SM00047|TIGR02541 BD65_692 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MF_00416|PF02119|PR01010 BD65_693 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MF_00415|PF02107|PR01008 BD65_694 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001444|IPR010930|IPR012834|IPR019776|IPR020013|IPR037925 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-basal body protein, FlgE/F/G|Flagellar hook-basal body protein, FlgE/F/G-like GO:0009426|GO:0071973 PF00460|PF06429|PS00588|SSF117143|TIGR02488|TIGR03506 BD65_695 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001444|IPR010930|IPR020013|IPR037925 Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-basal body protein, FlgE/F/G|Flagellar hook-basal body protein, FlgE/F/G-like GO:0071973 PF00460|PF06429|SSF117143|TIGR03506 BD65_696 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001444|IPR010930|IPR011491|IPR019776|IPR020013|IPR037058|IPR037925 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook protein FlgE|Flagellar hook protein FlgE superfamily|Flagellar hook-basal body protein, FlgE/F/G|Flagellar hook-basal body protein, FlgE/F/G-like GO:0071973 G3DSA:2.60.98.20|PF00460|PF06429|PF07559|PS00588|SSF117143|TIGR03506 BD65_697 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005648|IPR025963|IPR025965 Flagellar hook capping protein|FlgD Ig-like domain|FlgD Tudor-like domain G3DSA:2.30.30.910|G3DSA:2.60.40.4070|PF03963|PF13860|PF13861 BD65_698 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001444|IPR006299|IPR010930|IPR019776 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PS00588|TIGR01395 BD65_699 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001444|IPR006300|IPR019776 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PF00460|PIRSF002889|PS00588|TIGR01396 BD65_7 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005219|IPR007498 Intermembrane transport protein PqiA-like|Intermembrane transport protein PqiA-like, Enterobacteria-type PF04403|TIGR00155 BD65_70 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001764|IPR017853|IPR019800|IPR022956|IPR036962 Beta-hexosaminidase, bacterial|Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal|Glycoside hydrolase, family 3, N-terminal domain superfamily|Glycoside hydrolase, family 3, active site GO:0004553|GO:0004563|GO:0005975 G3DSA:3.20.20.300|MF_00364|PF00933|PS00775|SSF51445 BD65_700 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013974|IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain G3DSA:2.30.30.760|PF13144|SM00858|TIGR03170 BD65_701 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007412|IPR031316|IPR035890 Anti-sigma-28 factor FlgM superfamily|Anti-sigma-28 factor FlgM, C-terminal|Anti-sigma-28 factor, FlgM GO:0045892 PF04316|SSF101498|TIGR03824 BD65_702 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007809|IPR036679 FlgN-like protein|FlgN-like superfamily GO:0005515|GO:0044780 G3DSA:1.20.58.300|PF05130|SSF140566 BD65_703 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009420 Flagellar protein FlhE PF06366 BD65_704 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001712|IPR006301|IPR025505 FHIPEP conserved site|Flagellar biosynthesis protein FlhA|Type III secretion system FHIPEP GO:0009306|GO:0016020|GO:0016021|GO:0044780 G3DSA:1.10.490.80|G3DSA:1.10.8.540|G3DSA:3.40.30.60|PF00771|PIRSF005419|PR00949|PS00994|TIGR01398 BD65_705 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006135|IPR006136|IPR029025 Flagellar biosynthetic protein FlhB|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0044780 G3DSA:3.40.1690.10|PF01312|PR00950|SSF160544|TIGR00328 BD65_707 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000209|IPR015500|IPR022398|IPR023827|IPR023828|IPR036852 Peptidase S8, subtilisin, Asp-active site|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain|Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00136|PS00137|PS00138|SSF52743 BD65_708 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 G3DSA:1.10.287.500|G3DSA:1.20.5.590|PF04344|PIRSF002884|SSF75708 BD65_709 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BD65_71 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008886|IPR022987|IPR029058 Alpha/Beta hydrolase fold|Uncharacterised protein family UPF0227|Uncharacterised protein family UPF0227/Esterase YqiA G3DSA:3.40.50.1820|MF_01047|PF05728|SSF53474 BD65_710 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000673|IPR001789|IPR008248|IPR011006|IPR035909 CheY-like superfamily|Methylesterase CheB, C-terminal|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|SM00448|SSF52172|SSF52738 BD65_711 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000780|IPR022641|IPR022642|IPR026024|IPR029063|IPR036804 Chemotaxis protein methyltransferase CheR|Chemotaxis receptor methyltransferase CheR, N-terminal|Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|SM00138|SSF47757|SSF53335 BD65_712 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003122|IPR003660|IPR004089|IPR004090|IPR004091|IPR035440 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor Tar-related, ligand-binding|Chemotaxis methyl-accepting receptor, methyl-accepting site|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Methyl-accepting chemotaxis protein, four helix bundle domain superfamily GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:1.20.120.30|PF00015|PF00672|PF02203|PR00260|PS00538|SM00283|SM00304|SM00319|SSF47170|SSF58104 BD65_713 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003122|IPR003660|IPR004089|IPR004090|IPR004091|IPR035440 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor Tar-related, ligand-binding|Chemotaxis methyl-accepting receptor, methyl-accepting site|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Methyl-accepting chemotaxis protein, four helix bundle domain superfamily GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:1.20.120.30|PF00015|PF00672|PF02203|PR00260|PS00538|SM00283|SM00304|SM00319|SSF47170|SSF58104 BD65_714 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002545|IPR036061 CheW-like domain|CheW-like domain superfamily GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|SM00260|SSF50341 BD65_715 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002545|IPR003594|IPR004105|IPR004358|IPR008207|IPR015162|IPR035891|IPR036061|IPR036097|IPR036641|IPR036890|IPR037006 CheW-like domain|CheW-like domain superfamily|CheY binding|CheY-binding domain of CheA|HPT domain superfamily|Histidine kinase CheA-like, homodimeric domain|Histidine kinase CheA-like, homodimeric domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|G3DSA:3.30.70.400|PF01584|PF01627|PF02518|PF02895|PF09078|PR00344|SM00073|SM00260|SM00387|SM01231|SSF47226|SSF47384|SSF50341|SSF55052|SSF55874 BD65_716 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006665|IPR025713|IPR036737 Motility protein B, N-terminal domain|OmpA-like domain|OmpA-like domain superfamily G3DSA:3.30.1330.60|PF00691|PF13677|SSF103088 BD65_717 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000540|IPR002898|IPR022522 Flagellar motor protein MotA, conserved site|Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel PF01618|PS01307|TIGR03818 BD65_718 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 MF_01891|PD016592|PF05280|PIRSF003159|SSF160930 BD65_719 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023559|IPR036194 Flagellar transcriptional activator FlhD|Flagellar transcriptional activator FlhD superfamily GO:0044780|GO:0045893 G3DSA:1.10.4000.10|MF_00725|PD015582|PF05247|SSF63592 BD65_72 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023753|IPR036188 FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily GO:0016491|GO:0055114 G3DSA:3.50.50.100|PF07992|PR00368|PR00411|SSF51905 BD65_720 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA G3DSA:3.40.50.620|PF00582|PIRSF006276|SSF52402 BD65_721 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 G3DSA:3.30.70.260|PF02308|PR01837 BD65_722 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003122|IPR003660|IPR004089|IPR004090|IPR004091|IPR035440 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor Tar-related, ligand-binding|Chemotaxis methyl-accepting receptor, methyl-accepting site|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Methyl-accepting chemotaxis protein, four helix bundle domain superfamily GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF02203|PR00260|PS00538|SM00283|SM00304|SSF47170|SSF58104 BD65_723 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019717 Dextransucrase DSRB MF_01549|PF10781 BD65_724 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock domain|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BD65_725 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004199|IPR006101|IPR006102|IPR006103|IPR006104|IPR008979|IPR011013|IPR013783|IPR014718|IPR017853|IPR023230|IPR023232|IPR023933|IPR032312|IPR036156 Beta galactosidase small chain/ domain 5|Beta-Galactosidase/glucuronidase domain superfamily|Beta-galactosidase, domain 4|Galactose mutarotase-like domain superfamily|Galactose-binding-like domain superfamily|Glycoside hydrolase family 2, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, family 2|Glycoside hydrolase, family 2, active site|Glycoside hydrolase, family 2, beta-galactosidase|Glycoside hydrolase, family 2, conserved site|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase-type carbohydrate-binding|Glycosyl hydrolases family 2, sugar binding domain|Immunoglobulin-like fold GO:0003824|GO:0004553|GO:0004565|GO:0005975|GO:0009341|GO:0016798|GO:0030246 G3DSA:2.60.120.260|G3DSA:2.60.40.10|G3DSA:2.70.98.10|G3DSA:3.20.20.80|MF_01687|PF00703|PF02836|PF02837|PF02929|PF16353|PR00132|PS00608|PS00719|SM01038|SSF49303|SSF49785|SSF51445|SSF74650 BD65_726 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011032|IPR013149|IPR013154|IPR014189|IPR020843|IPR036291 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like superfamily|NAD(P)-binding domain superfamily|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase PIG3 GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735|TIGR02824 BD65_727 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019713 Inner membrane protein YlaC PF10777 BD65_728 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR021266 Kdo hydroxylase PF11004 BD65_729 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017704 Putative selenium-binding protein YdfZ PF14001|TIGR03318 BD65_73 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008816 Glycine zipper 2TM domain GO:0019867 PF05433 BD65_731 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010384|IPR024079 Metallopeptidase, catalytic domain superfamily|MtfA family GO:0008237 G3DSA:1.10.472.150|G3DSA:3.40.390.10|MF_01593|PF06167|SSF55486 BD65_734 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR038488 Integrase, DNA-binding domain superfamily G3DSA:3.30.160.390 BD65_735 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003542|IPR008278|IPR037143 4'-phosphopantetheinyl transferase domain|4'-phosphopantetheinyl transferase domain superfamily|Enterobactin synthetase-like, component D GO:0000287|GO:0008897|GO:0009239|GO:0009366|GO:0016780 G3DSA:3.90.470.20|PF01648|PR01399|SSF56214 BD65_736 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001898|IPR030676 Citrate carrier CitT-related|Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 PF00939|PIRSF002457|TIGR00785 BD65_737 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002736|IPR017551 Triphosphoribosyl-dephospho-CoA protein|Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 G3DSA:1.10.4200.10|MF_00397|PF01874|TIGR03125 BD65_738 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 PF03802|TIGR03124 BD65_739 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006472|IPR037171 Citrate lyase, alpha subunit|NagB/RpiA transferase-like GO:0005737|GO:0006084|GO:0008814|GO:0009346 G3DSA:3.40.1080.10|PF04223|PIRSF009451|SSF100950|TIGR01584 BD65_74 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417|IPR036101|IPR037235 CarD-like/TRCF domain|CarD-like/TRCF domain superfamily|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|TRCF-like, C-terminal domain|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:2.30.30.840|G3DSA:3.30.2060.10|G3DSA:3.40.50.11140|G3DSA:3.40.50.11180|G3DSA:3.40.50.300|G3DSA:3.90.1150.50|MF_00969|PF00270|PF00271|PF02559|PF03461|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 BD65_740 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005000|IPR006475|IPR011206|IPR015813 Citrate lyase beta subunit-like|Citrate lyase, beta subunit, bacteria|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824|GO:0005737|GO:0006084|GO:0008816|GO:0009346 G3DSA:3.20.20.60|PF03328|PIRSF015582|SSF51621|TIGR01588 BD65_741 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006495|IPR023439 Citrate lyase acyl carrier protein CitD|Malonate decarboxylase/citrate lyase acyl carrier protein GO:0005737 MF_00805|PD015389|PF06857|PIRSF002736|TIGR01608 BD65_742 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004821|IPR005216|IPR013166|IPR014729|IPR016181 Acyl-CoA N-acyltransferase|Citrate lyase ligase|Citrate lyase ligase, C-terminal|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0008771|GO:0009058 G3DSA:3.40.50.620|G3DSA:3.40.630.30|PD016147|PF08218|PIRSF005751|SM00764|SSF52374|SSF55729|TIGR00124|TIGR00125 BD65_743 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000014|IPR003594|IPR004358|IPR016120|IPR029151|IPR033463|IPR035965|IPR036890 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|PAS domain|PAS domain superfamily|Periplasmic sensor-like domain superfamily|Signal transduction histidine kinase, sporulation regulator SpoOB|Signal transduction histidine kinase-related protein, C-terminal|Single cache domain 3 GO:0000155|GO:0000160|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF17203|PR00344|SM00091|SM00387|SSF103190|SSF55785|SSF55874|SSF55890 BD65_744 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR011006|IPR024187|IPR028141 CheY-like superfamily|Signal transduction response regulator, citrate/malate metabolism|Signal transduction response regulator, receiver domain|Transcriptional regulator GO:0000160|GO:0003700 G3DSA:3.40.50.2300|PF00072|PF12431|PIRSF006171|SM00448|SSF52172 BD65_745 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR001789|IPR011006|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal GO:0000160|GO:0003677|GO:0006355 G3DSA:3.40.50.12740|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BD65_746 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR007895|IPR011712|IPR036890 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|MASE1|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF02518|PF05231|PF07730|SM00387|SSF55874 BD65_747 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000849|IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily|Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF07690|PIRSF002808|SSF103473 BD65_748 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR026045 Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|SSF53850 BD65_749 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_75 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003838|IPR011925|IPR025857 ABC transporter permease protein domain|Lipoprotein-releasing system transmembrane protein LolC/E|MacB-like periplasmic core domain GO:0016020|GO:0016021|GO:0042953|GO:0042954 PF02687|PF12704|TIGR02212 BD65_750 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005524|GO:0016887|GO:0022857|GO:0043190|GO:0055085 G3DSA:2.40.50.140|G3DSA:2.40.50.940|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BD65_751 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000595|IPR012318|IPR014710|IPR018490|IPR036388|IPR036390 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SM00419|SSF46785|SSF51206 BD65_753 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007458 Protein of unknown function DUF496 MF_00683|PD030876|PF04363|PIRSF028773 BD65_754 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 PF04632 BD65_755 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013120|IPR036291 Male sterility, NAD-binding|NAD(P)-binding domain superfamily G3DSA:3.40.50.720|PF07993|SSF51735 BD65_756 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012337|IPR013520|IPR013620|IPR023607|IPR036397|IPR038649 Exodeoxyribonuclease I|Exodeoxyribonuclease I, C-terminal|Exonuclease I, SH3-like domain superfamily|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0004529|GO:0006281|GO:0008852 G3DSA:1.20.1280.70|G3DSA:2.30.30.450|G3DSA:3.30.420.10|PF00929|PF08411|PIRSF000977|SM00479|SSF53098 BD65_757 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF13520|PIRSF006060 BD65_759 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000531|IPR010916|IPR012910|IPR036942|IPR037066 TonB box, conserved site|TonB-dependent receptor, plug domain|TonB-dependent receptor, plug domain superfamily|TonB-dependent receptor-like, beta-barrel|TonB-dependent receptor-like, beta-barrel domain superfamily G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS00430|SSF56935 BD65_76 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR011924|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Lipoprotein releasing system, ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016887|GO:0044873 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR02211 BD65_760 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BD65_761 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000522|IPR037294 ABC transporter, BtuC-like|ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 BD65_762 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002491 ABC transporter periplasmic binding domain G3DSA:3.40.50.1980|PF01497|SSF53807 BD65_763 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0006865|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1740.10|PF00324|PIRSF006060|PS00218 BD65_765 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002686|IPR036515 Transposase IS200-like|Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|SM01321|SSF143422 BD65_766 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001959|IPR010095|IPR021027 Probable transposase, IS891/IS1136/IS1341|Transposase IS605, OrfB, C-terminal|Transposase, putative, helix-turn-helix domain PF01385|PF07282|PF12323|TIGR01766 BD65_767 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004630|IPR018383 Uncharacterised protein family UPF0324, bacteria|Uncharacterised protein family UPF0324, prokaryote GO:0016021 PF03601|TIGR00698 BD65_768 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001719|IPR013022|IPR018246|IPR036237 AP endonuclease 2|AP endonuclease 2, zinc binding site|Xylose isomerase-like superfamily|Xylose isomerase-like, TIM barrel domain GO:0003677|GO:0006281|GO:0008270 G3DSA:3.20.20.150|MF_00152|PF01261|PS00729|PS00730|PS00731|SM00518|SSF51658|TIGR00587 BD65_769 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003352|IPR003353|IPR003501|IPR006327|IPR036095 PTS system IIB component-like superfamily|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, EIIC|Phosphotransferase system, fructose IIC component|Phosphotransferase system, fructose-specific IIB subunit GO:0005351|GO:0008982|GO:0009401|GO:0016020|GO:0016021|GO:0022877 G3DSA:3.40.50.2300|PF02302|PF02378|SSF52794|TIGR00829|TIGR01427 BD65_77 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003838|IPR011925|IPR011926|IPR025857 ABC transporter permease protein domain|Lipoprotein-releasing system transmembrane protein LolC/E|Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type|MacB-like periplasmic core domain GO:0016020|GO:0016021|GO:0042953|GO:0042954|GO:0044874 PF02687|PF12704|TIGR02212|TIGR02213 BD65_770 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002173|IPR011611|IPR017583|IPR022463|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Fructose 1-phosphate kinase|Ribokinase-like|Tagatose/fructose phosphokinase GO:0005975|GO:0008662|GO:0016773 G3DSA:3.40.1190.20|PF00294|PIRSF000535|PS00583|PS00584|SSF53613|TIGR03168|TIGR03828 BD65_771 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000032|IPR001020|IPR002114|IPR002178|IPR016152|IPR035895 HPr-like superfamily|PTS EIIA type-2 domain|Phosphocarrier protein HPr-like|Phosphotransferase system, HPr histidine phosphorylation site|Phosphotransferase system, HPr serine phosphorylation site|Phosphotransferase/anion transporter G3DSA:3.30.1340.10|G3DSA:3.40.930.10|PF00359|PF00381|PR00107|PS00369|PS00372|PS00589|SSF55594|SSF55804|TIGR01003 BD65_772 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|SSF55811 BD65_773 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005126|IPR009154|IPR036280|IPR038266 Membrane-bound tetrahaem cytochrome TorC/YecK|Multiheme cytochrome superfamily|NapC/NirT cytochrome c superfamily|NapC/NirT cytochrome c, N-terminal GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 G3DSA:1.10.3820.10|PF03264|PIRSF000014|SSF48695 BD65_774 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006655|IPR006656|IPR006657|IPR006658|IPR009010 Aspartate decarboxylase-like domain superfamily|Molybdopterin dinucleotide-binding domain|Molybdopterin guanine dinucleotide-containing S/N-oxide reductase|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0043546|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|G3DSA:3.90.55.10|PF00384|PF01568|PS00490|SSF50692|SSF53706|TIGR00509 BD65_776 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002293|IPR013059|IPR018227 Amino acid/polyamine transporter 2|Amino acid/polyamine transporter I|Tryptophan/tyrosine transporter GO:0003333|GO:0005887|GO:0015173|GO:0015801|GO:0016020|GO:0022857|GO:0055085 PF03222|PIRSF006060|PR00166|TIGR00837 BD65_777 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001059|IPR008991|IPR011897|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2, domain 2|Translation elongation factor P-like, YeiP|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain superfamily GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00646|PF01132|PF08207|PF09285|PIRSF005901|PS01275|SM00841|SM01185|SSF50104|SSF50249|TIGR02178 BD65_778 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004628|IPR036237 Mannonate dehydratase|Xylose isomerase-like superfamily GO:0006064|GO:0008927 G3DSA:3.20.20.150|MF_00106|PF03786|PIRSF016049|SSF51658|TIGR00695 BD65_779 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000669|IPR008927|IPR013118|IPR013131|IPR013328|IPR023027|IPR036291 6-phosphogluconate dehydrogenase, domain 2|6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|Mannitol dehydrogenase|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|Mannitol dehydrogenase, conserved site|NAD(P)-binding domain superfamily GO:0003824|GO:0016491|GO:0019594|GO:0050662|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01232|PF08125|PR00084|PS00974|SSF48179|SSF51735 BD65_78 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000600|IPR023505 N-acetyl-D-glucosamine kinase|ROK family GO:0045127 G3DSA:3.30.420.40|MF_01271|PF00480|PS01125|SSF53067 BD65_781 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF02492|PF07683|SM00833|SSF52540 BD65_782 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000326|IPR032908|IPR036938 Lipid A 1-diphosphate synthase|Phosphatidic acid phosphatase type 2/haloperoxidase|Phosphatidic acid phosphatase type 2/haloperoxidase superfamily GO:0005886|GO:0043165|GO:0050380 MF_01945|PF01569|SM00014|SSF48317 BD65_783 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000064|IPR038765 Endopeptidase, NLPC/P60 domain|Papain-like cysteine peptidase superfamily G3DSA:3.90.1720.10|PF00877|SSF54001 BD65_784 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001633|IPR024744|IPR035919 EAL domain|EAL domain superfamily|Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain G3DSA:3.20.20.450|PF00563|PF12792|SM00052|SSF141868 BD65_785 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|SSF53850 BD65_786 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 BD65_787 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR025966|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Oligopeptide transport permease C-like, N-terminal domain GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BD65_788 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BD65_789 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020489 Uncharacterised protein family YejG PD073777|PF13989 BD65_79 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003000|IPR026591|IPR027546|IPR029035 DHS-like NAD/FAD-binding domain superfamily|Sirtuin family|Sirtuin, catalytic core small domain superfamily|Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 G3DSA:3.30.1600.10|G3DSA:3.40.50.1220|MF_01121|PF02146|SSF52467 BD65_790 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004812|IPR011701|IPR036259 Drug resistance transporter Bcr/CmlA subfamily|MFS transporter superfamily|Major facilitator superfamily GO:0006855|GO:0015238|GO:0016021|GO:0055085 G3DSA:1.20.1720.10|PF07690|SSF103473|TIGR00710 BD65_791 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103|IPR036986 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain superfamily|RNA-binding S4 domain|RNA-binding S4 domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|G3DSA:3.30.70.1560|G3DSA:3.30.70.580|PF00849|PF01479|PS01149|SM00363|SSF55120|SSF55174|TIGR00093 BD65_792 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001650|IPR006935|IPR011332|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Zinc-binding ribosomal protein GO:0003677|GO:0005524|GO:0006412|GO:0016787 G3DSA:3.40.50.300|PF00271|PF04851|SM00487|SM00490|SSF52540|SSF57829 BD65_793 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011035|IPR020055|IPR020056|IPR029751 Ribosomal protein L25|Ribosomal protein L25, short-form|Ribosomal protein L25/Gln-tRNA synthetase, N-terminal|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.40.240.10|MF_01336|PD012503|PF01386|SSF50715 BD65_794 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007358 Nucleoid-associated protein NdpA GO:0009295 MF_00730|PF04245 BD65_795 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009857|IPR023202 Uncharacterised protein family UPF0352|YejL-like superfamily G3DSA:1.10.3390.10|MF_00816|PD027794|PF07208|PIRSF006188|SSF158651 BD65_796 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000917|IPR012159|IPR017849|IPR017850|IPR024588 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain superfamily|Inner membrane protein YejM|Inner membrane protein YejM, N-terminal|Sulfatase, N-terminal GO:0003824|GO:0008484 G3DSA:3.40.720.10|PF00884|PF11893|PIRSF004950|SSF53649 BD65_798 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002734|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Dihydrofolate reductase-like domain superfamily GO:0008703|GO:0009231|GO:0055114 G3DSA:3.40.430.10|PF01872|SSF53597 BD65_799 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001647|IPR009057|IPR036271 DNA-binding HTH domain, TetR-type|Homeobox-like domain superfamily|Tetracyclin repressor-like, C-terminal domain superfamily GO:0003677 G3DSA:1.10.357.10|PF00440|SSF46689|SSF48498 BD65_8 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003399 Mce/MlaD PF02470 BD65_80 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001261|IPR002933|IPR010161|IPR011650|IPR036264 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Bacterial exopeptidase dimerisation domain|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006508|GO:0006518|GO:0008237|GO:0008270|GO:0016787|GO:0045148 G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_00550|PF01546|PF07687|PIRSF037215|PS00758|PS00759|SSF53187|SSF55031|TIGR01882 BD65_801 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010391|IPR036687 DNA damage-inducible protein DinI-like|DinI-like superfamily G3DSA:3.30.910.10|PF06183|SSF54857 BD65_802 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001279|IPR024884|IPR036866 Metallo-beta-lactamase|N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D|Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GO:0008270|GO:0070290 G3DSA:3.60.15.10|PF12706|PIRSF038896|SSF56281 BD65_803 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BD65_804 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF13302|SSF55729 BD65_807 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001702|IPR001897|IPR013793|IPR023614 Porin domain superfamily|Porin, Gram-negative type|Porin, Gram-negative type, conserved site|Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 G3DSA:2.40.160.10|PF00267|PR00182|PR00183|PS00576|SSF56935 BD65_808 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002686|IPR036515 Transposase IS200-like|Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|SM01321|SSF143422 BD65_809 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BD65_81 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003347 JmjC domain G3DSA:1.10.10.2510|G3DSA:2.60.120.650|PF08007|SM00558|SSF51197 BD65_810 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003661|IPR008207|IPR030861|IPR032306|IPR036097|IPR036641|IPR036890|IPR038616 HPT domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Phosphotransferase RcsD|Phosphotransferase RcsD, RcsD-ABL domain|Phosphotransferase RcsD, RcsD-ABL domain superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000155|GO:0000160|GO:0005887|GO:0007165|GO:0009927 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.565.10|G3DSA:3.40.50.11620|MF_00980|PF01627|PF02518|PF16359|SM00387|SM00388|SSF47226|SSF47384|SSF55874 BD65_811 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR001789|IPR011006|IPR016032|IPR030864|IPR036388 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Transcriptional regulatory protein RcsB|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|MF_00981|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BD65_812 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR019017|IPR030856|IPR036097|IPR036890|IPR038388 CheY-like superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|RcsC, C-terminal domain superfamily|Sensor histidine kinase RcsC|Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004673|GO:0005524|GO:0005886|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772|GO:0018106 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.10970|G3DSA:3.40.50.2300|MF_00979|PF00072|PF00512|PF02518|PF09456|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 BD65_813 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002205|IPR005743|IPR006691|IPR013757|IPR013758|IPR013760|IPR035516 DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal|DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain superfamily|Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|SM00434|SSF101904|SSF56719|TIGR01063 BD65_814 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010233|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 G3DSA:3.40.50.150|MF_00472|PF13489|SSF53335|TIGR01983 BD65_815 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000788|IPR005144|IPR008926|IPR013346|IPR013509 ATP-cone domain|Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, class I , alpha subunit GO:0004748|GO:0005524|GO:0006260|GO:0055114 G3DSA:1.10.1650.20|G3DSA:3.20.70.20|PF00317|PF02867|PF03477|PR01183|PS00089|SSF48168|SSF51998|TIGR02506 BD65_816 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000358|IPR009078|IPR012348|IPR030475 Ferritin-like superfamily|Ribonucleotide reductase small subunit family|Ribonucleotide reductase small subunit, acitve site|Ribonucleotide reductase-like GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF00268|PS00368|SSF47240 BD65_817 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001041|IPR006058|IPR012675|IPR036010 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-like superfamily|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain superfamily GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PS00197|SSF54292 BD65_818 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR008936 Rho GTPase activation protein GO:0007165 SSF48350 BD65_819 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005658|IPR023084|IPR036198 Ecotin superfamily|Proteinase inhibitor I11, ecotin|Proteinase inhibitor I11, ecotin, gammaproteobacteria G3DSA:2.60.40.550|MF_00706|PF03974|PIRSF006865|SSF49772 BD65_82 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR003661|IPR004358|IPR015014|IPR036097|IPR036890|IPR038429 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|PhoQ Sensor|PhoQ Sensor superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0005524|GO:0007165|GO:0016020|GO:0016310|GO:0016772|GO:0018106|GO:0046872 G3DSA:1.10.287.130|G3DSA:3.30.450.140|G3DSA:3.30.565.10|PF02518|PF08918|PR00344|SM00387|SM00388|SSF47384|SSF55874 BD65_820 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001453|IPR008135|IPR036425|IPR036653 CinA-like, C-terminal|Competence-induced protein CinA|MoaB/Mog domain|MoaB/Mog-like domain superfamily G3DSA:3.40.980.10|MF_00226_B|PF00994|PIRSF006728|SM00852|SSF142433|SSF53218|TIGR00177|TIGR00200 BD65_821 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007267|IPR016480 Glucose translocase, bactoprenol-linked|GtrA-like protein GO:0000271|GO:0016021 PF04138|PIRSF006298 BD65_822 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BD65_823 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025686 Glucosyl transferase II PF14264 BD65_824 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013059|IPR013061|IPR018227 Amino acid/polyamine transporter 2|Tryptophan/tryrosine permease, conserved site|Tryptophan/tyrosine transporter GO:0003333|GO:0005887|GO:0015173|GO:0015801 G3DSA:1.20.1740.10|PF03222|PR00166|PS00594|TIGR00837 BD65_825 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009998|IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel|YfaZ PF07437|SSF56925 BD65_826 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002226|IPR010582|IPR011614|IPR018028|IPR020835|IPR024708|IPR024711|IPR037060 Catalase active site|Catalase core domain|Catalase core domain superfamily|Catalase haem-binding site|Catalase immune-responsive domain|Catalase superfamily|Catalase, mono-functional, haem-containing|Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|PF06628|PIRSF038928|PR00067|PS00437|PS00438|SM01060|SSF56634 BD65_827 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000873|IPR010192|IPR020845|IPR025110 2-succinylbenzoate--CoA ligase|AMP-binding enzyme, C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0005524|GO:0008756|GO:0009234 G3DSA:3.30.300.30|G3DSA:3.40.50.12780|PF00501|PF13193|PS00455|SSF56801|TIGR01923 BD65_828 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010196|IPR013342|IPR029017|IPR029065|IPR036849 Enolase C-terminal domain-like|Enolase-like, C-terminal domain superfamily|Enolase-like, N-terminal|Mandelate racemase/muconate lactonizing enzyme, C-terminal|o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00470|PF13378|SM00922|SSF51604|SSF54826|TIGR01927 BD65_829 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001753|IPR010198|IPR014748|IPR018376|IPR029045 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB|ClpP/crotonase-like domain superfamily|Enoyl-CoA hydratase, C-terminal|Enoyl-CoA hydratase/isomerase|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008935|GO:0009234 G3DSA:1.10.12.10|G3DSA:3.90.226.10|MF_01934|PF00378|PS00166|SSF52096|TIGR01929 BD65_83 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR001867|IPR011006|IPR036388 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BD65_830 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000073|IPR022485|IPR029058 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase|Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 GO:0009234|GO:0070205 G3DSA:3.40.50.1820|MF_01660|PF12697|SSF53474|TIGR03695 BD65_831 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004433|IPR011766|IPR012001|IPR029061|IPR032264 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase|Menaquinone biosynthesis protein MenD, middle domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0003824|GO:0009234|GO:0030976|GO:0070204 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|MF_01659|PF02775|PF02776|PF16582|PIRSF004983|SSF52518|TIGR00173 BD65_832 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004561|IPR005801|IPR015890|IPR034681 ADC synthase|Chorismate-utilising enzyme, C-terminal|Isochorismate synthase|Isochorismate synthase MenF GO:0008909|GO:0009058|GO:0009234 G3DSA:3.60.120.10|MF_01935|PF00425|SSF56322|TIGR00543 BD65_833 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 PF05957 BD65_834 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009476 Protein of unknown function DUF1097 PF06496 BD65_835 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001750|IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 MF_00445|PF00361|TIGR01770 BD65_836 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001750|IPR003918|IPR010227 NADH-quinone oxidoreductase, chain M/4|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437|TIGR01972 BD65_837 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001516|IPR001750|IPR003945|IPR018393 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH-plastoquinone oxidoreductase, chain 5|NADH-plastoquinone oxidoreductase, chain 5 subgroup|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 PF00361|PF00662|PR01434|PR01435|TIGR01974 BD65_838 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001133|IPR039428 NADH-ubiquinone oxidoreductase chain 4L/K|NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like GO:0016651|GO:0042773|GO:0055114 MF_01456|PF00420 BD65_839 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 G3DSA:1.20.120.1200|PF00499 BD65_84 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel PF13505|SSF56925 BD65_840 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010226|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 G3DSA:3.30.70.3270|MF_01351|PF12838|PS00198|SSF54862|TIGR01971 BD65_841 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001694|IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MF_01350|PF00146|PS00667|PS00668 BD65_842 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000283|IPR006656|IPR006657|IPR006963|IPR009010|IPR010228|IPR019574|IPR036010 2Fe-2S ferredoxin-like superfamily|Aspartate decarboxylase-like domain superfamily|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site|NADH:ubiquinone oxidoreductase, subunit G|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008137|GO:0009055|GO:0016020|GO:0016491|GO:0016651|GO:0042773|GO:0043546|GO:0051536|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.740|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PF10588|PF13510|PS00641|PS00642|PS00643|SM00926|SM00929|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01973 BD65_843 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001949|IPR011537|IPR011538|IPR019575|IPR037207|IPR037225 NADH ubiquinone oxidoreductase, F subunit|NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily|NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain|NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 G3DSA:1.20.1440.230|G3DSA:3.10.20.600|G3DSA:3.40.50.11540|PF01512|PF10589|PS00644|PS00645|SM00928|SSF140490|SSF142019|SSF142984|TIGR01959 BD65_844 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002023|IPR036249 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like superfamily GO:0016491|GO:0055114 G3DSA:1.10.10.1590|G3DSA:3.40.30.10|PF01257|PIRSF000216|PS01099|SSF52833|TIGR01958 BD65_845 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001135|IPR001268|IPR010218|IPR014029|IPR022885|IPR023062|IPR029014|IPR037232|IPR038290 NAD(P)H-quinone oxidoreductase subunit D/H|NADH dehydrogenase, subunit C|NADH dehydrogenase, subunit CD|NADH-quinone oxidoreductase, subunit D|NADH-quinone oxidoreductase, subunit D superfamily|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily|NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site|[NiFe]-hydrogenase, large subunit GO:0008137|GO:0016651|GO:0030964|GO:0048038|GO:0050136|GO:0051287|GO:0055114 G3DSA:1.10.645.20|G3DSA:3.30.460.80|MF_01357|MF_01358|MF_01359|PD001581|PF00329|PF00346|PS00535|SSF143243|SSF56762|TIGR01961|TIGR01962 BD65_846 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006137|IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0008137|GO:0048038|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.40.50.12280|MF_01356|PF01058|PS01150|SSF56770|TIGR01957 BD65_847 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000440|IPR023043|IPR038430 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid|NADH:ubiquinone oxidoreductase, subunit 3 superfamily|NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0016651|GO:0055114 G3DSA:1.20.58.1610|MF_01394|PF00507 BD65_848 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_849 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 BD65_85 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000362|IPR004769|IPR008948|IPR013539|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase PurB, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0006188|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF08328|PR00149|PS00163|SSF48557|TIGR00928 BD65_850 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003607|IPR006674|IPR022971 5'-deoxynucleotidase YfbR|HD domain|HD/PDEase domain G3DSA:1.10.3210.10|MF_01100|PD353566|PF13023|SM00471|SSF109604 BD65_851 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004680|IPR006037|IPR031312|IPR036721 Citrate transporter-like domain|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, C-terminal domain superfamily|Sodium/sulphate symporter, conserved site GO:0006813|GO:0008324|GO:0016021|GO:0055085 G3DSA:3.30.70.1450|PF02080|PF03600|PS01271|SSF116726 BD65_853 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005587|IPR023145|IPR023146 Uncharacterised protein family UPF0304, YfbU|YfbU, alpha-helical bundle domain superfamily|YfbU, helix-hairpin domain superfamily G3DSA:1.10.287.680|G3DSA:1.10.3190.10|MF_00762|PD035118|PF03887|PIRSF006272|SSF116960 BD65_854 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007334 Uncharacterised protein family UPF0208 MF_01101|PF04217 BD65_855 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|SSF53067|TIGR00016 BD65_856 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002505|IPR004614|IPR010766|IPR016475|IPR027417|IPR028979 DRTGG|HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily|P-loop containing nucleoside triphosphate hydrolase|Phosphate acetyl/butaryl transferase|Phosphate acetyltransferase|Phosphate acetyltransferase, bacteria GO:0008959|GO:0016407|GO:0016746 G3DSA:3.40.1390.20|G3DSA:3.40.50.10750|G3DSA:3.40.50.10950|G3DSA:3.40.50.300|PF01515|PF07085|PF13500|PIRSF006107|SSF52540|SSF53659|SSF75138|TIGR00651 BD65_857 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain superfamily|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|SM00354|SSF47413|SSF53822 BD65_858 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002178|IPR016152 PTS EIIA type-2 domain|Phosphotransferase/anion transporter G3DSA:3.40.930.10|PF00359|SSF55804 BD65_859 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003501|IPR036095 PTS system IIB component-like superfamily|Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 G3DSA:3.40.50.2300|PF02302|SSF52794 BD65_86 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007451|IPR035932 HflD-like superfamily|High frequency lysogenization protein HflD G3DSA:1.10.3890.10|MF_00695|PD037115|PF04356|SSF101322 BD65_860 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 PF03611 BD65_861 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR015797|IPR024195 NUDIX hydrolase domain|NUDIX hydrolase, YfcD, predicted|NUDIX hydrolase-like domain superfamily GO:0016787|GO:0016817 G3DSA:3.90.79.10|PF00293|PIRSF017340|SSF55811 BD65_862 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000979|IPR020935|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|Phosphodiesterase MJ0936/Vps29|Phosphodiesterase YfcE, conserved site G3DSA:3.60.21.10|PF12850|PS01269|SSF56300|TIGR00040 BD65_863 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001633|IPR035919 EAL domain|EAL domain superfamily G3DSA:3.20.20.450|PF00563|SM00052|SSF141868 BD65_864 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004045|IPR004046|IPR036249|IPR036282 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal domain superfamily|Glutathione S-transferase, N-terminal|Thioredoxin-like superfamily GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BD65_865 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001509|IPR010099|IPR013549|IPR036291 Domain of unknown function DUF1731|Epimerase family protein SDR39U1|NAD(P)-binding domain superfamily|NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PF08338|SSF51735|TIGR01777 BD65_866 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BD65_867 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR010065|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|MetI-like superfamily GO:0016020|GO:0016021|GO:0022857|GO:0043190|GO:0055085|GO:0071705 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BD65_868 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR010065|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|MetI-like superfamily GO:0016020|GO:0016021|GO:0022857|GO:0043190|GO:0055085|GO:0071705 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BD65_869 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001638|IPR005768|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site|Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SSF53850|TIGR01096 BD65_87 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|SSF52402|TIGR00420 BD65_870 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003382|IPR004507|IPR036551 Flavin prenyltransferase UbiX-like|Flavin prenyltransferase-like|Flavoprotein GO:0003824 G3DSA:3.40.50.1950|MF_01984|PF02441|SSF52507|TIGR00421 BD65_871 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000836|IPR005854|IPR029055|IPR029057 Amidophosphoribosyltransferase|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004044|GO:0009113|GO:0009116 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF00156|PF13522|PIRSF000485|SSF53271|SSF56235|TIGR01134 BD65_872 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674 BD65_873 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007730|IPR032898|IPR036680 Cell division protein DedD|Sporulation-like domain|Sporulation-like domain superfamily GO:0030428|GO:0032506|GO:0042834 G3DSA:3.30.70.1070|MF_02022|PF05036|SSF110997 BD65_874 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001645|IPR004101|IPR013221|IPR018109|IPR036565|IPR036615 Folylpolyglutamate synthetase|Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, C-terminal domain superfamily|Mur ligase, central|Mur-like, catalytic domain superfamily GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF02875|PF08245|PIRSF001563|PS01012|SSF53244|SSF53623|TIGR01499 BD65_875 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000438|IPR029045|IPR034733 Acetyl-CoA carboxylase|Acetyl-CoA carboxylase carboxyl transferase, beta subunit|ClpP/crotonase-like domain superfamily GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_01395|PF01039|PR01070|SSF52096|TIGR00515 BD65_876 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR032816 SNARE associated Golgi protein PF09335 BD65_877 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001406|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|SSF55120|TIGR00071 BD65_878 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000534|IPR012280|IPR036291 NAD(P)-binding domain superfamily|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01118|PF02774|PIRSF000148|SM00859|SSF51735|SSF55347 BD65_879 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006139|IPR006140|IPR020921|IPR024531|IPR029752|IPR029753|IPR036291|IPR038251 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|Erythronate-4-phosphate dehydrogenase|Erythronate-4-phosphate dehydrogenase, dimerisation domain|NAD(P)-binding domain superfamily|PdxB, dimerisation domain superfamily GO:0005737|GO:0008615|GO:0016616|GO:0033711|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.1370.170|G3DSA:3.40.50.720|MF_01825|PF00389|PF02826|PF11890|PS00065|PS00671|SSF51735|SSF52283 BD65_88 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|SSF55811 BD65_880 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009057|IPR011051|IPR013096|IPR014710|IPR018060|IPR018062|IPR020449 Cupin 2, conserved barrel|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeobox-like domain superfamily|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF07883|PF12833|PR00032|PS00041|SM00342|SSF46689|SSF51182 BD65_881 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BD65_882 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 G3DSA:1.10.3730.20|PF00892|SSF103481 BD65_883 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000524|IPR004839|IPR015421|IPR015422|IPR015424|IPR036388|IPR036390 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|Transcription regulator HTH, GntR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PR00035|SM00345|SSF46785|SSF53383 BD65_884 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000866|IPR036249 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like superfamily GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 BD65_885 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR012336|IPR017937|IPR036249 Thioredoxin, conserved site|Thioredoxin-like fold|Thioredoxin-like superfamily GO:0045454 G3DSA:3.40.30.10|PF13462|PS00194|SSF52833 BD65_886 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017937|IPR028250|IPR036249 Thiol:disulfide interchange protein DsbD, N-terminal domain|Thioredoxin, conserved site|Thioredoxin-like superfamily GO:0045454 G3DSA:3.40.30.10|PF11412|PF13899|PS00194|SSF52833 BD65_888 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 PIRSF020588 BD65_889 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007803|IPR027443 Aspartyl/asparaginy/proline hydroxylase|Isopenicillin N synthase-like GO:0018193 G3DSA:2.60.120.330|PF05118|SSF51197 BD65_89 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000748|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.30.70.1560|G3DSA:3.30.70.580|PF00849|PS01149|SSF55120|TIGR00093 BD65_890 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014030|IPR014031|IPR016039|IPR018201|IPR020841 Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824 G3DSA:3.40.47.10|PF00109|PF02801|PS00606|SM00825|SSF53901 BD65_891 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006076|IPR008471|IPR017610|IPR023032|IPR036188 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain superfamily|MnmC-like methyltransferase|tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC|tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0004808|GO:0008033|GO:0008168|GO:0016491|GO:0016645|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.40.50.150|G3DSA:3.50.50.60|MF_01102|PF01266|PF05430|SSF51905|TIGR03197 BD65_892 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR014987 Uncharacterised protein family YfcL PF08891 BD65_893 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007411 Elongation factor P hydroxylase PF04315 BD65_894 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BD65_895 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005073|IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily|Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 G3DSA:3.30.1380.10|PF03411|PIRSF018455|SSF55166 BD65_896 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000453|IPR020541|IPR035904 Chorismate synthase|Chorismate synthase AroC superfamily|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|SSF103263|TIGR00033 BD65_897 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002052|IPR004556|IPR007848|IPR017127|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Ribosomal protein L3-specific, glutamine-N5-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0005622|GO:0006479|GO:0008168|GO:0008276|GO:0009007|GO:0032259|GO:0032775 G3DSA:3.40.50.150|MF_02125|PF05175|PIRSF037167|PS00092|SSF53335|TIGR00536|TIGR03533 BD65_898 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002625|IPR022990|IPR036063 Smr domain|Smr domain superfamily|Uncharacterised protein family UPF0115 G3DSA:3.30.1370.110|MF_01042|PF01713|SM00463|SSF160443 BD65_899 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004449|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 G3DSA:3.40.50.1240|PF00300|SSF53254|TIGR00249 BD65_9 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|PF03886|SSF159594 BD65_90 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004439|IPR019818|IPR024084 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0004450|GO:0006099|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|SM01329|SSF53659|TIGR00183 BD65_900 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001753|IPR006108|IPR006176|IPR006180|IPR008927|IPR012802|IPR029045|IPR036291 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|ClpP/crotonase-like domain superfamily|Enoyl-CoA hydratase/isomerase|Fatty oxidation complex, alpha subunit FadJ|NAD(P)-binding domain superfamily GO:0003824|GO:0003857|GO:0004300|GO:0006631|GO:0006635|GO:0008692|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.50|G3DSA:3.40.50.720|G3DSA:3.90.226.10|MF_01617|PF00378|PF00725|PF02737|PS00067|SSF48179|SSF51735|SSF52096|TIGR02440 BD65_901 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002155|IPR012806|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Acetyl-CoA C-acyltransferase FadI|Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0003988|GO:0005737|GO:0006631|GO:0016042|GO:0016747 G3DSA:3.40.47.10|MF_01618|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|SSF53901|TIGR01930|TIGR02446 BD65_902 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005272|IPR035571 Conserved hypothetical protein CHP00743|UPF0234-like, C-terminal G3DSA:3.30.70.860|PF04175|TIGR00743 BD65_903 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) G3DSA:2.40.160.60|PF03349|SSF56935 BD65_904 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007428 MlaA lipoprotein GO:0016020 PF04333|PR01805 BD65_905 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990|IPR017560 Cytochrome c-type biogenesis protein CcmI|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|PF14559|SSF48452|TIGR03142 BD65_906 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005616|IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily|CcmH/CycL/Ccl2/NrfF family G3DSA:1.10.8.640|PF03918 BD65_907 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004799|IPR013740|IPR017937|IPR036249 Periplasmic protein thiol:disulphide oxidoreductase DsbE|Redoxin|Thioredoxin, conserved site|Thioredoxin-like superfamily GO:0015036|GO:0016491|GO:0017004|GO:0030288|GO:0045454 G3DSA:3.40.30.10|PF08534|PS00194|SSF52833|TIGR00385 BD65_908 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002541|IPR003567|IPR003568|IPR032523 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein|Cytochrome c-type biogenesis protein CcmF|Cytochrome c-type biogenesis protein CcmF, C-terminal GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PF16327|PR01410|PR01411|TIGR00353 BD65_909 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004329|IPR036127 CcmE-like superfamily|CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 G3DSA:2.40.50.140|MF_01959|PF03100|SSF82093 BD65_91 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001690|IPR016181|IPR018311 Acyl-CoA N-acyltransferase|Autoinducer synthase|Autoinducer synthesis, conserved site GO:0016740 G3DSA:3.40.630.30|PF00765|PR01549|PS00949|SSF55729 BD65_910 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PF04995|TIGR03141 BD65_911 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002541|IPR003557 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PR01386|TIGR01191 BD65_912 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003544|IPR026031 Cytochrome c-type biogenesis protein CcmB|Cytochrome c-type biogenesis protein CcmB, bacteria GO:0015232|GO:0015886|GO:0016020|GO:0017004 PF03379|PIRSF002764|PR01414|TIGR01190 BD65_913 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR005895|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, haem export, CcmA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0016887|GO:0017004 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR01189 BD65_916 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004624|IPR013987|IPR013988 PhnA protein|PhnA protein, C-terminal|PhnA protein, N-terminal G3DSA:2.20.25.10|G3DSA:2.30.30.40|PF03831|PF08274|SSF57783|SSF82057|TIGR00686 BD65_917 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011757|IPR023346|IPR031304 Lysozyme-like domain superfamily|Lytic transglycosylase MltB|Transglycosylase SLT domain 2 G3DSA:1.10.530.10|G3DSA:1.10.8.350|PF13406|SSF53955|TIGR02282 BD65_918 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR031807|IPR035069 HicB-like antitoxin of toxin-antitoxin system|TTHA1013/TTHA0281-like G3DSA:3.30.160.250|PF15970|SSF143100 BD65_919 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 PF01292|SSF81342 BD65_92 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR005143|IPR016032|IPR036388|IPR036693 Signal transduction response regulator, C-terminal effector|Transcription factor LuxR-like, autoinducer-binding domain|Transcription factor LuxR-like, autoinducer-binding domain superfamily|Transcription regulator LuxR, C-terminal|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.80|PF00196|PF03472|PR00038|SM00421|SSF46894|SSF75516 BD65_920 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 BD65_921 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010856|IPR027443 Isopenicillin N synthase-like|Protein of unknown function DUF1479 G3DSA:2.60.120.330|PF07350|SSF51197 BD65_922 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR010559|IPR011620|IPR036890 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region|Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 G3DSA:1.10.1760.20|G3DSA:3.30.565.10|PF02518|PF06580|PF07694|SM00387|SSF55781|SSF55874 BD65_923 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR007492|IPR011006 CheY-like superfamily|LytTR DNA-binding domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677 G3DSA:2.40.50.40|G3DSA:3.40.50.2300|PF00072|PF04397|SM00448|SM00850|SSF52172 BD65_924 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BD65_925 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 G3DSA:3.30.420.40|G3DSA:3.40.367.20|MF_00524|PF02685|SSF53067|TIGR00749 BD65_926 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007896 Chlorhexidine efflux transporter PF05232 BD65_927 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.290|PF00126|PF03466|PR00039|SSF46785|SSF53850 BD65_928 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR019638 Protein of unknown function DUF2502 PF10697 BD65_929 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 MF_00221|PF01566|PR00447|TIGR01197 BD65_930 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002668|IPR011642|IPR011657 Concentrative nucleoside transporter C-terminal domain|Concentrative nucleoside transporter N-terminal domain|Nucleoside transporter/FeoB GTPase, Gate domain PF01773|PF07662|PF07670 BD65_936 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0043039 G3DSA:1.10.10.350|G3DSA:3.40.50.620|MF_00022|PF00749|PR00987|PS00178|SSF48163|SSF52374|TIGR00464 BD65_939 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR009267 Putative nucleotidyltransferase PF06042 BD65_94 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001360|IPR017853|IPR018120|IPR033132 Glycoside hydrolase family 1|Glycoside hydrolase family 1, active site|Glycoside hydrolase superfamily|Glycosyl hydrolases family 1, N-terminal conserved site GO:0004553|GO:0005975 G3DSA:3.20.20.80|PF00232|PR00131|PS00572|PS00653|SSF51445 BD65_940 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR025577 FlxA-like protein PF14282 BD65_941 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR024530 Putative quorum-sensing-regulated virulence factor PD056452|PF12843 BD65_942 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001357|IPR001679|IPR003583|IPR004149|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239|IPR033136|IPR036420 BRCT domain|BRCT domain superfamily|Helix-hairpin-helix DNA-binding motif, class 1|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|NAD-dependent DNA ligase, conserved site|Nucleic acid-binding, OB-fold|RuvA domain 2-like|Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003677|GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.20.70.80|G3DSA:2.40.50.140|G3DSA:3.30.1490.70|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03119|PF03120|PF12826|PF14520|PIRSF001604|PS01055|PS01056|SM00278|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575 BD65_943 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007449|IPR011919|IPR036765 Cell division protein ZipA|ZipA, C-terminal FtsZ-binding domain|ZipA, C-terminal FtsZ-binding domain superfamily GO:0016021|GO:0090529 G3DSA:3.30.1400.10|MF_00509|PD035754|PF04354|SM00771|SSF64383|TIGR02205 BD65_944 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 MF_00468|PF07264 BD65_945 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001216|IPR001926|IPR005856|IPR005859|IPR036052 Cysteine synthase|Cysteine synthase CysK|Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Pyridoxal-phosphate dependent enzyme|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|SSF53686|TIGR01136|TIGR01139 BD65_946 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000032|IPR001020|IPR002114|IPR035895 HPr-like superfamily|Phosphocarrier protein HPr-like|Phosphotransferase system, HPr histidine phosphorylation site|Phosphotransferase system, HPr serine phosphorylation site G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|PS00589|SSF55594|TIGR01003 BD65_947 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000121|IPR006318|IPR008279|IPR008731|IPR015813|IPR018274|IPR023151|IPR024692|IPR036618|IPR036637 PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphohistidine domain superfamily|Phosphotransferase system, enzyme I|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, enzyme I-like|PtsI, HPr-binding domain superfamily|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824|GO:0008965|GO:0009401|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.50.30.10|PF00391|PF02896|PF05524|PIRSF000732|PR01736|PS00370|PS00742|SSF47831|SSF51621|SSF52009|TIGR01417 BD65_948 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001127|IPR011055 Duplicated hybrid motif|Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 G3DSA:2.70.70.10|PF00358|PS00371|SSF51261|TIGR00830 BD65_949 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001216|IPR001926|IPR005856|IPR005858|IPR036052 Cysteine synthase|Cysteine synthase CysM|Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Pyridoxal-phosphate dependent enzyme|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|SSF53686|TIGR01136|TIGR01138 BD65_95 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001567|IPR024077 Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 G3DSA:1.10.1370.10|G3DSA:1.10.1370.40|PF01432|SSF55486 BD65_950 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR005666|IPR008995|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Sulphate transport system permease protein 1 GO:0005524|GO:0008272|GO:0015419|GO:0016020|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF50331|SSF52540|TIGR00968 BD65_951 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR005667|IPR011866|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00969|TIGR02140 BD65_952 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000515|IPR005667|IPR011865|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00969|TIGR02139 BD65_953 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 G3DSA:3.40.190.10|PF13531|SSF53850|TIGR00971 BD65_954 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004742|IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily|Sialic acid transporter GO:0015136|GO:0015739|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|MF_01238|PF07690|SSF103473 BD65_955 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000281|IPR001347|IPR009057|IPR036388 Helix-turn-helix protein RpiR|Homeobox-like domain superfamily|Sugar isomerase (SIS)|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0006355|GO:0097367|GO:1901135 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|SSF46689|SSF53697 BD65_956 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004375|IPR037012 YhcH/YjgK/YiaL family|YhcH/YjgK/YiaL superfamily G3DSA:2.60.120.370|PF04074|SSF51197|TIGR00022 BD65_957 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000600 ROK family G3DSA:3.30.420.40|PF00480|PS01125|SSF53067 BD65_958 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007260|IPR011060|IPR013785 Aldolase-type TIM barrel|Putative N-acetylmannosamine-6-phosphate epimerase|Ribulose-phosphate binding barrel GO:0003824|GO:0006051|GO:0047465 G3DSA:3.20.20.70|PF04131|SSF51366 BD65_959 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002220|IPR013785|IPR020624 Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, conserved site GO:0003824|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|PS00665|SM01130|SSF51569 BD65_96 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic G3DSA:1.10.287.950|SSF58104 BD65_960 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006314|IPR011008 Dimeric alpha-beta barrel|Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 PF04261|SSF54909|TIGR01413 BD65_961 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010938|IPR038714 Protein of unknown function DUF1131|YfeY-like superfamily G3DSA:2.60.460.10|PD105195|PF06572 BD65_962 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005220|IPR016052|IPR036700 Bacterial OB-fold|Bacterial OB-fold superfamily|Bacteriophage 933W, L0136 G3DSA:2.40.50.200|PF04076|SSF101756|TIGR00156 BD65_963 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181|IPR017255|IPR023072 Acetyltransferase, GNAT, predicted|Acetyltransferase, YpeA|Acyl-CoA N-acyltransferase|GNAT domain GO:0016747 G3DSA:3.40.630.30|MF_01127|PF00583|PIRSF037663|SSF55729 BD65_964 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001260|IPR018375|IPR036406 Coproporphyrinogen III oxidase, aerobic|Coproporphyrinogen III oxidase, conserved site|Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 G3DSA:3.40.1500.10|MF_00333|PF01218|PIRSF000166|PR00073|PS01021|SSF102886 BD65_965 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003791 Protein of unknown function UPF0178 MF_00489|PF02639 BD65_966 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR015884|IPR036291|IPR037062 Malic enzyme, N-terminal domain|Malic enzyme, N-terminal domain superfamily|Malic enzyme, NAD-binding|Malic enzyme, conserved site|NAD(P)-binding domain superfamily|NAD(P)-dependent malic enzyme|Phosphate acetyl/butaryl transferase GO:0004470|GO:0004471|GO:0006108|GO:0016746|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.10950|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|PS00331|SM00919|SM01274|SSF51735|SSF53223|SSF53659 BD65_967 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000086|IPR004385|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase-like domain superfamily|Nucleoside diphosphate pyrophosphatase GO:0016787|GO:0016818|GO:0046872 G3DSA:3.90.79.10|PF00293|SSF55811|TIGR00052 BD65_968 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005126|IPR011885|IPR024717|IPR036280|IPR038266 Denitrification system component NapC/NirT/NrfH|Multiheme cytochrome superfamily|NapC/NirT cytochrome c superfamily|NapC/NirT cytochrome c, N-terminal|Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 G3DSA:1.10.3820.10|PF03264|PIRSF000013|SSF48695|TIGR02161 BD65_969 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005591|IPR036280 Multiheme cytochrome superfamily|Nitrate reductase cytochrome c-type subunit NapB G3DSA:1.10.1130.10|PF03892|PIRSF006105|SSF48695 BD65_97 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 PF03390|PIRSF005348 BD65_970 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006656|IPR006657|IPR006963|IPR009010|IPR010051|IPR019546|IPR027467 Aspartate decarboxylase-like domain superfamily|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Periplasmic nitrate reductase, large subunit|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0008940|GO:0016491|GO:0030151|GO:0042597|GO:0043546|GO:0051539|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.30.200.210|G3DSA:3.40.228.10|G3DSA:3.40.50.740|MF_01630|PF00384|PF01568|PF04879|PF10518|PS00551|SM00926|SSF50692|SSF53706|TIGR01409|TIGR01706 BD65_971 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005623 Chaperone NapD, nitrate reductase assembly G3DSA:3.30.70.920|MF_02200|PF03927 BD65_972 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004496|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Ferredoxin-type protein NapF GO:0051539 G3DSA:3.30.70.20|MF_02201|PF12838|PS00198|SSF54862|TIGR00402 BD65_973 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000792|IPR001789|IPR011006|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal GO:0000160|GO:0003677|GO:0006355 G3DSA:3.40.50.12740|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BD65_974 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR017162|IPR036388 Uncharacterised conserved protein UCP037266|Winged helix-like DNA-binding domain superfamily G3DSA:1.10.10.10|PF09904|PIRSF037266 BD65_975 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0006855|GO:0015562|GO:0016020|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 BD65_976 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002701|IPR008240|IPR036263 Chorismate mutase II, prokaryotic-type|Chorismate mutase type II superfamily|Chorismate mutase, periplasmic GO:0046417 G3DSA:1.20.140.170|PF01817|PIRSF026640|SM00830|SSF48600|TIGR01806 BD65_977 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|PF12688|SSF48452 BD65_978 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006504|IPR006660|IPR036249 Arsenate reductase-like|Thioredoxin-like superfamily|Transcriptional regulator Spx/MgsR G3DSA:3.40.30.10|PF03960|SSF52833|TIGR01617 BD65_979 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001261|IPR002933|IPR005941|IPR011650|IPR036264 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Bacterial exopeptidase dimerisation domain|Peptidase M20|Peptidase M20, dimerisation domain|Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0006508|GO:0008237|GO:0009014|GO:0009089|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_01690|PF01546|PF07687|PS00758|SSF53187|SSF55031|TIGR01246 BD65_98 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001789|IPR011006|IPR024187 CheY-like superfamily|Signal transduction response regulator, citrate/malate metabolism|Signal transduction response regulator, receiver domain GO:0000160|GO:0003700 G3DSA:3.40.50.2300|PF00072|PIRSF006171|SM00448|SSF52172 BD65_980 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003709|IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily|Peptidase M15B GO:0006508|GO:0008233 G3DSA:3.30.1380.10|PF02557|SSF55166 BD65_981 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR020910 Uncharacterised protein family UPF0370 MF_01566|PF13980 BD65_982 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|SSF53474 BD65_983 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR007807|IPR016181|IPR024914|IPR027417|IPR033442|IPR038321 Acyl-CoA N-acyltransferase|GNAT domain|Helicase domain|P-loop containing nucleoside triphosphate hydrolase|TmcA, C-terminal domain superfamily|tRNA(Met) cytidine acetyltransferase TmcA|tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain GO:0000049|GO:0002101|GO:0051391|GO:0051392 G3DSA:1.20.120.890|G3DSA:3.40.50.11040|G3DSA:3.40.50.12320|MF_01886|PF05127|PF13718|PF17176|SSF52540|SSF55729 BD65_984 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR007382 Uncharacterised protein family UPF0756, transmembrame MF_01874|PD021096|PF04284 BD65_985 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001636|IPR018236|IPR028923 Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|PS01058|SSF56104|TIGR00081 BD65_986 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR010653|IPR014524 NlpB/DapX lipoprotein|Outer membrane protein assembly factor BamC G3DSA:3.30.310.170|G3DSA:3.30.530.50|MF_00924|PF06804|PIRSF026343 BD65_987 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002220|IPR005263|IPR013785|IPR020624|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00665|PS00666|SM01130|SSF51569|TIGR00674 BD65_988 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 G3DSA:3.30.70.260|PF13740|PIRSF028103|SSF55021 BD65_989 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000866|IPR024706|IPR036249 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like superfamily GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|SSF52833 BD65_99 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003594|IPR004358|IPR013767|IPR029151|IPR033463|IPR035965|IPR036890|IPR039506 Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|PAS domain superfamily|PAS fold|Periplasmic sensor-like domain superfamily|Signal transduction histidine kinase-related protein, C-terminal|Single cache domain 3|SpoOB, alpha-helical domain GO:0006355|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00989|PF02518|PF14689|PF17203|PR00344|SM00387|SSF103190|SSF55785|SSF55874 BD65_990 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BD65_991 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001915|IPR011990|IPR030873 Beta-barrel assembly-enhancing protease|Peptidase M48|Tetratricopeptide-like helical domain superfamily GO:0004222|GO:0005515|GO:0006508|GO:0008237|GO:0016020|GO:0061077 G3DSA:1.25.40.10|G3DSA:3.30.2010.10|MF_00997|PF01435|PF14559|SSF48452 BD65_992 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006659|IPR006660|IPR036249 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like superfamily GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|SSF52833|TIGR00014 BD65_993 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR013317|IPR017788|IPR020591|IPR022864|IPR027417 Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|DnaA regulatory inactivator Hda|DnaA regulatory inactivator Hda, Enterobacteriaceae|P-loop containing nucleoside triphosphate hydrolase GO:0032297 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01158|PF00308|PR00051|SSF52540|TIGR03420 BD65_994 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0016020|GO:0022857|GO:0055085 PF00860|PS01116|TIGR00801 BD65_995 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR005765|IPR029057|IPR034332 Phosphoribosyltransferase-like|Uracil phosphoribosyl transferase|Uracil phosphoribosyltransferase, bacterial-type GO:0004845|GO:0006223 G3DSA:3.40.50.2020|MF_01218_B|PF14681|SSF53271|TIGR01091 BD65_996 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR004733|IPR010918|IPR016188|IPR036676|IPR036921 Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, C-terminal domain|PurM-like, C-terminal domain superfamily|PurM-like, N-terminal domain|PurM-like, N-terminal domain superfamily GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|SSF55326|SSF56042|TIGR00878 BD65_997 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR001555|IPR002376|IPR004607|IPR036477 Formyl transferase, N-terminal|Formyl transferase, N-terminal domain superfamily|Phosphoribosylglycinamide formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|PS00373|SSF53328|TIGR00639 BD65_998 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF13302|SSF55729 BD65_999 /data/g2d_mirror_genbank/Yersinia_ruckeri_YRB/ASM83425v1_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR00972