BD65_1555 739995011d1e3029099197705942024a 449 SMART SM00878 336 441 1.3E-64 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BD65_1555 739995011d1e3029099197705942024a 449 Gene3D G3DSA:3.30.470.20 86 433 9.0E-158 T 14-10-2018 BD65_1555 739995011d1e3029099197705942024a 449 Gene3D G3DSA:3.30.1490.20 131 203 9.0E-158 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BD65_1555 739995011d1e3029099197705942024a 449 Gene3D G3DSA:3.40.50.20 1 85 2.6E-34 T 14-10-2018 BD65_1555 739995011d1e3029099197705942024a 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BD65_1555 739995011d1e3029099197705942024a 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.5E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BD65_1555 739995011d1e3029099197705942024a 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BD65_1555 739995011d1e3029099197705942024a 449 SUPERFAMILY SSF52440 1 113 1.8E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BD65_1555 739995011d1e3029099197705942024a 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.7E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BD65_1555 739995011d1e3029099197705942024a 449 SUPERFAMILY SSF51246 331 444 6.8E-44 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BD65_1555 739995011d1e3029099197705942024a 449 SUPERFAMILY SSF56059 83 347 2.36E-69 T 14-10-2018 BD65_1555 739995011d1e3029099197705942024a 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 5.4E-85 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BD65_1555 739995011d1e3029099197705942024a 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 1.0E-249 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 BD65_3202 b68c3c128339069a25c65ee989138a03 379 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BD65_3202 b68c3c128339069a25c65ee989138a03 379 Gene3D G3DSA:3.40.50.150 14 368 4.1E-73 T 14-10-2018 BD65_3202 b68c3c128339069a25c65ee989138a03 379 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 6.5E-203 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 BD65_3202 b68c3c128339069a25c65ee989138a03 379 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 79.618 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 BD65_3202 b68c3c128339069a25c65ee989138a03 379 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 21 374 8.0E-16 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BD65_3202 b68c3c128339069a25c65ee989138a03 379 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site BD65_3202 b68c3c128339069a25c65ee989138a03 379 Gene3D G3DSA:3.40.1350.30 56 211 4.1E-73 T 14-10-2018 BD65_3202 b68c3c128339069a25c65ee989138a03 379 SUPERFAMILY SSF53335 3 374 8.88E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_3022 ce1f17219153b8991373595879e5a872 245 SUPERFAMILY SSF88713 1 242 8.15E-93 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BD65_3022 ce1f17219153b8991373595879e5a872 245 Pfam PF03746 LamB/YcsF family 3 232 5.1E-95 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BD65_3022 ce1f17219153b8991373595879e5a872 245 Gene3D G3DSA:3.20.20.370 1 245 1.0E-101 T 14-10-2018 BD65_3022 ce1f17219153b8991373595879e5a872 245 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 42.701 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.2E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 SUPERFAMILY SSF50447 205 301 4.71E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.7E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 Gene3D G3DSA:2.40.30.10 206 334 7.5E-53 T 14-10-2018 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.5E-236 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 2.9E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.7E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 SUPERFAMILY SSF52540 6 219 2.92E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.46 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 SUPERFAMILY SSF50465 298 393 1.58E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 Gene3D G3DSA:2.40.30.10 338 393 1.7E-29 T 14-10-2018 BD65_2204 85ac9159fcb2ffde47eeb7bab78b0e9a 394 Gene3D G3DSA:3.40.50.300 1 203 1.1E-69 T 14-10-2018 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 Pfam PF13180 PDZ domain 293 381 3.2E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 Pfam PF13365 Trypsin-like peptidase domain 115 251 5.7E-30 T 14-10-2018 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 475 3.7E-160 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 SUPERFAMILY SSF50494 4 299 6.75E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 SUPERFAMILY SSF50156 272 381 4.93E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 Gene3D G3DSA:2.30.42.10 389 477 5.5E-29 T 14-10-2018 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 SUPERFAMILY SSF50156 405 474 3.42E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 Gene3D G3DSA:2.40.10.120 37 284 8.6E-82 T 14-10-2018 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 PRINTS PR00834 HtrA/DegQ protease family signature 125 137 2.7E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 PRINTS PR00834 HtrA/DegQ protease family signature 187 211 2.7E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 2.7E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 2.7E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 PRINTS PR00834 HtrA/DegQ protease family signature 146 166 2.7E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 PRINTS PR00834 HtrA/DegQ protease family signature 330 342 2.7E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 SMART SM00228 290 372 2.4E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 SMART SM00228 397 469 6.6E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 390 465 1.9E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_2614 feaff871a45fde4cafa0aca473aed32e 477 Gene3D G3DSA:2.30.42.10 288 388 5.1E-27 T 14-10-2018 BD65_1458 356f6127c9376f375354cd41e19cee08 396 Gene3D G3DSA:3.40.50.150 186 382 4.2E-50 T 14-10-2018 BD65_1458 356f6127c9376f375354cd41e19cee08 396 PIRSF PIRSF037565 1 375 1.7E-164 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 BD65_1458 356f6127c9376f375354cd41e19cee08 396 SUPERFAMILY SSF53335 192 373 3.82E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1458 356f6127c9376f375354cd41e19cee08 396 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 50.053 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 BD65_1458 356f6127c9376f375354cd41e19cee08 396 Gene3D G3DSA:3.40.50.150 7 182 9.6E-56 T 14-10-2018 BD65_1458 356f6127c9376f375354cd41e19cee08 396 Pfam PF05175 Methyltransferase small domain 200 371 1.8E-53 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BD65_1458 356f6127c9376f375354cd41e19cee08 396 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_15 b2f42d1d3563420e68968dbac84442b8 168 Gene3D G3DSA:3.40.50.300 32 145 6.6E-28 T 14-10-2018 BD65_15 b2f42d1d3563420e68968dbac84442b8 168 PIRSF PIRSF003093 1 168 2.2E-81 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 BD65_15 b2f42d1d3563420e68968dbac84442b8 168 Pfam PF03846 Cell division inhibitor SulA 8 120 1.9E-53 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 BD65_15 b2f42d1d3563420e68968dbac84442b8 168 SUPERFAMILY SSF52540 32 146 2.6E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_15 b2f42d1d3563420e68968dbac84442b8 168 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 168 40.197 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 BD65_1524 f3ca91f238e7bfd767b41e58620e219b 552 SUPERFAMILY SSF51011 475 550 6.64E-18 T 14-10-2018 BD65_1524 f3ca91f238e7bfd767b41e58620e219b 552 Gene3D G3DSA:3.20.20.80 7 467 5.5E-187 T 14-10-2018 BD65_1524 f3ca91f238e7bfd767b41e58620e219b 552 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 549 1.5E-250 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 BD65_1524 f3ca91f238e7bfd767b41e58620e219b 552 Pfam PF00128 Alpha amylase, catalytic domain 30 371 3.0E-123 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BD65_1524 f3ca91f238e7bfd767b41e58620e219b 552 SUPERFAMILY SSF51445 5 472 1.21E-152 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_1524 f3ca91f238e7bfd767b41e58620e219b 552 Gene3D G3DSA:2.60.40.1180 476 549 2.2E-18 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BD65_1524 f3ca91f238e7bfd767b41e58620e219b 552 Pfam PF16657 Maltogenic Amylase, C-terminal domain 475 545 2.6E-7 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal BD65_1524 f3ca91f238e7bfd767b41e58620e219b 552 SMART SM00642 15 414 2.5E-149 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BD65_1524 f3ca91f238e7bfd767b41e58620e219b 552 Gene3D G3DSA:3.90.400.10 107 175 5.5E-187 T 14-10-2018 BD65_678 2e0d805419c0894c0d5950e63995615d 237 Pfam PF02108 Flagellar assembly protein FliH 104 228 6.9E-40 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BD65_678 2e0d805419c0894c0d5950e63995615d 237 PRINTS PR01003 Flagellar assembly protein FliH signature 85 103 4.0E-79 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BD65_678 2e0d805419c0894c0d5950e63995615d 237 PRINTS PR01003 Flagellar assembly protein FliH signature 142 164 4.0E-79 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BD65_678 2e0d805419c0894c0d5950e63995615d 237 PRINTS PR01003 Flagellar assembly protein FliH signature 104 123 4.0E-79 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BD65_678 2e0d805419c0894c0d5950e63995615d 237 PRINTS PR01003 Flagellar assembly protein FliH signature 62 84 4.0E-79 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BD65_678 2e0d805419c0894c0d5950e63995615d 237 PRINTS PR01003 Flagellar assembly protein FliH signature 210 235 4.0E-79 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BD65_678 2e0d805419c0894c0d5950e63995615d 237 PRINTS PR01003 Flagellar assembly protein FliH signature 165 192 4.0E-79 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BD65_678 2e0d805419c0894c0d5950e63995615d 237 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 4.0E-79 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BD65_678 2e0d805419c0894c0d5950e63995615d 237 PRINTS PR01003 Flagellar assembly protein FliH signature 124 141 4.0E-79 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BD65_678 2e0d805419c0894c0d5950e63995615d 237 PRINTS PR01003 Flagellar assembly protein FliH signature 193 209 4.0E-79 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BD65_1312 7dc6e6786c5051c85b2c1f46e34590e5 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 2.2E-72 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BD65_1312 7dc6e6786c5051c85b2c1f46e34590e5 273 SUPERFAMILY SSF48179 163 271 3.4E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_1312 7dc6e6786c5051c85b2c1f46e34590e5 273 SUPERFAMILY SSF51735 4 161 1.88E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1312 7dc6e6786c5051c85b2c1f46e34590e5 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 1.8E-28 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BD65_1312 7dc6e6786c5051c85b2c1f46e34590e5 273 Gene3D G3DSA:1.10.3730.10 166 273 4.4E-33 T 14-10-2018 BD65_1312 7dc6e6786c5051c85b2c1f46e34590e5 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 247 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BD65_1312 7dc6e6786c5051c85b2c1f46e34590e5 273 PIRSF PIRSF000193 3 271 1.3E-74 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BD65_1312 7dc6e6786c5051c85b2c1f46e34590e5 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.659 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BD65_1312 7dc6e6786c5051c85b2c1f46e34590e5 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 6.8E-20 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BD65_1312 7dc6e6786c5051c85b2c1f46e34590e5 273 Gene3D G3DSA:3.40.50.720 2 165 4.0E-49 T 14-10-2018 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 362 6.3E-32 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 Gene3D G3DSA:1.20.272.10 242 363 2.9E-43 T 14-10-2018 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.9E-42 T 14-10-2018 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 9.4E-135 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 SUPERFAMILY SSF52540 35 222 1.62E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 Gene3D G3DSA:3.30.300.150 500 628 1.2E-46 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 Gene3D G3DSA:3.40.50.300 13 177 1.6E-104 T 14-10-2018 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 SUPERFAMILY SSF48019 243 367 4.25E-35 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 SMART SM00382 37 178 2.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 502 643 1.6E-59 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 420 500 2.5E-19 T 14-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2867 da81ae82b4303a04a12599ab5763d05b 646 Gene3D G3DSA:1.10.8.60 8 240 1.6E-104 T 14-10-2018 BD65_55 cc608b8589fb3d572b53f15e7de80c71 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 8.7E-144 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BD65_55 cc608b8589fb3d572b53f15e7de80c71 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 1.8E-35 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BD65_55 cc608b8589fb3d572b53f15e7de80c71 317 SUPERFAMILY SSF53901 4 317 9.29E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_55 cc608b8589fb3d572b53f15e7de80c71 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.227 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BD65_55 cc608b8589fb3d572b53f15e7de80c71 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.3E-32 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BD65_55 cc608b8589fb3d572b53f15e7de80c71 317 Gene3D G3DSA:3.40.47.10 1 317 1.1E-123 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_186 7169f66cda9dfa827204c1b874c15d82 252 SUPERFAMILY SSF52540 3 207 3.22E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_186 7169f66cda9dfa827204c1b874c15d82 252 Pfam PF00005 ABC transporter 20 149 5.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_186 7169f66cda9dfa827204c1b874c15d82 252 SMART SM00382 29 199 7.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_186 7169f66cda9dfa827204c1b874c15d82 252 Gene3D G3DSA:3.40.50.300 1 238 9.2E-58 T 14-10-2018 BD65_372 35402db90e87dc6cd2bb9a0e8f45ae36 172 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 36 171 1.5E-28 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BD65_372 35402db90e87dc6cd2bb9a0e8f45ae36 172 Gene3D G3DSA:2.60.40.200 19 172 3.9E-49 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BD65_372 35402db90e87dc6cd2bb9a0e8f45ae36 172 SUPERFAMILY SSF49329 23 172 7.07E-45 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BD65_372 35402db90e87dc6cd2bb9a0e8f45ae36 172 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 64 74 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BD65_718 a5f87a3ba0af05c3bec4e861209aedca 193 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 187 46.498 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 BD65_718 a5f87a3ba0af05c3bec4e861209aedca 193 PIRSF PIRSF003159 1 182 4.8E-91 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 BD65_718 a5f87a3ba0af05c3bec4e861209aedca 193 SUPERFAMILY SSF160930 5 161 1.12E-65 T 14-10-2018 BD65_718 a5f87a3ba0af05c3bec4e861209aedca 193 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 7.8E-85 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 BD65_718 a5f87a3ba0af05c3bec4e861209aedca 193 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 193 8.0E-108 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 BD65_2271 8132daf2d223382675d34ad2105c7133 244 Gene3D G3DSA:2.60.40.10 27 143 3.8E-39 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2271 8132daf2d223382675d34ad2105c7133 244 SUPERFAMILY SSF49354 22 142 7.06E-39 T 14-10-2018 IPR008962 PapD-like superfamily BD65_2271 8132daf2d223382675d34ad2105c7133 244 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 101 118 - T 14-10-2018 IPR018046 Pili assembly chaperone, conserved site BD65_2271 8132daf2d223382675d34ad2105c7133 244 PRINTS PR00969 Pili chaperone signature 28 37 2.9E-31 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2271 8132daf2d223382675d34ad2105c7133 244 PRINTS PR00969 Pili chaperone signature 73 94 2.9E-31 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2271 8132daf2d223382675d34ad2105c7133 244 PRINTS PR00969 Pili chaperone signature 161 176 2.9E-31 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2271 8132daf2d223382675d34ad2105c7133 244 PRINTS PR00969 Pili chaperone signature 125 140 2.9E-31 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2271 8132daf2d223382675d34ad2105c7133 244 PRINTS PR00969 Pili chaperone signature 102 119 2.9E-31 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2271 8132daf2d223382675d34ad2105c7133 244 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 225 1.2E-10 T 14-10-2018 IPR016148 Pili assembly chaperone, C-terminal BD65_2271 8132daf2d223382675d34ad2105c7133 244 SUPERFAMILY SSF49584 151 237 2.09E-16 T 14-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BD65_2271 8132daf2d223382675d34ad2105c7133 244 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 143 8.7E-40 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BD65_2271 8132daf2d223382675d34ad2105c7133 244 Gene3D G3DSA:2.60.40.10 147 237 1.4E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_1774 638e316a379ba6aa923e0e6897370c00 355 SUPERFAMILY SSF51735 3 345 2.82E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1774 638e316a379ba6aa923e0e6897370c00 355 Gene3D G3DSA:3.90.25.10 202 334 1.6E-139 T 14-10-2018 BD65_1774 638e316a379ba6aa923e0e6897370c00 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 340 7.2E-161 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 BD65_1774 638e316a379ba6aa923e0e6897370c00 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 6.9E-99 T 14-10-2018 IPR016040 NAD(P)-binding domain BD65_1774 638e316a379ba6aa923e0e6897370c00 355 Gene3D G3DSA:3.40.50.720 3 326 1.6E-139 T 14-10-2018 BD65_2254 3f2762c40cbe857ff5d80bc85679fe99 652 SUPERFAMILY SSF56801 12 643 5.1E-187 T 14-10-2018 BD65_2254 3f2762c40cbe857ff5d80bc85679fe99 652 Gene3D G3DSA:3.30.300.30 518 652 5.2E-34 T 14-10-2018 BD65_2254 3f2762c40cbe857ff5d80bc85679fe99 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 9.4E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 BD65_2254 3f2762c40cbe857ff5d80bc85679fe99 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 BD65_2254 3f2762c40cbe857ff5d80bc85679fe99 652 Pfam PF00501 AMP-binding enzyme 84 522 4.3E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_2254 3f2762c40cbe857ff5d80bc85679fe99 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.2E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BD65_2254 3f2762c40cbe857ff5d80bc85679fe99 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.96 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 BD65_2254 3f2762c40cbe857ff5d80bc85679fe99 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_2254 3f2762c40cbe857ff5d80bc85679fe99 652 Gene3D G3DSA:3.40.50.12780 53 515 2.8E-103 T 14-10-2018 BD65_1902 58c04efcd6e2286f390d4694351ca330 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.609 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BD65_1902 58c04efcd6e2286f390d4694351ca330 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 6.7E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BD65_1902 58c04efcd6e2286f390d4694351ca330 157 SUPERFAMILY SSF75217 1 152 8.5E-46 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BD65_1902 58c04efcd6e2286f390d4694351ca330 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 152 3.2E-73 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BD65_1902 58c04efcd6e2286f390d4694351ca330 157 Gene3D G3DSA:3.40.1280.10 1 157 3.8E-74 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BD65_1902 58c04efcd6e2286f390d4694351ca330 157 PIRSF PIRSF029256 1 154 5.1E-72 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 2.6E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.0E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 SUPERFAMILY SSF50447 205 301 3.53E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 SUPERFAMILY SSF50465 298 393 4.89E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 Gene3D G3DSA:2.40.30.10 206 334 1.4E-53 T 14-10-2018 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 Gene3D G3DSA:2.40.30.10 338 393 7.3E-28 T 14-10-2018 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 2.7E-238 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.259 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 SUPERFAMILY SSF52540 6 219 4.53E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.7E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 Gene3D G3DSA:3.40.50.300 1 203 3.8E-71 T 14-10-2018 BD65_1658 1e289da03d5d0a27d9510da3d03ab703 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.3E-32 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BD65_2219 45a2fac6cae4870c4a4e43211f471c5b 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.983 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2219 45a2fac6cae4870c4a4e43211f471c5b 104 Gene3D G3DSA:2.30.30.30 2 104 3.1E-40 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 BD65_2219 45a2fac6cae4870c4a4e43211f471c5b 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2219 45a2fac6cae4870c4a4e43211f471c5b 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 2.0E-39 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2219 45a2fac6cae4870c4a4e43211f471c5b 104 SUPERFAMILY SSF50104 4 100 1.02E-32 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BD65_2219 45a2fac6cae4870c4a4e43211f471c5b 104 SMART SM00739 4 31 0.0014 T 14-10-2018 IPR005824 KOW BD65_2219 45a2fac6cae4870c4a4e43211f471c5b 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 5.0E-23 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1541 41693f3cc122e39ca2ca73d5a23480dd 481 SUPERFAMILY SSF111283 19 480 1.57E-130 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BD65_1541 41693f3cc122e39ca2ca73d5a23480dd 481 Gene3D G3DSA:3.30.2290.10 8 238 1.1E-18 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BD65_1541 41693f3cc122e39ca2ca73d5a23480dd 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 4.2E-68 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BD65_1541 41693f3cc122e39ca2ca73d5a23480dd 481 PIRSF PIRSF004919 14 481 4.2E-145 T 14-10-2018 IPR025502 TldD BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 PRINTS PR00996 Glutamate methyltransferase family signature 121 141 2.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 PRINTS PR00996 Glutamate methyltransferase family signature 246 269 2.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 PRINTS PR00996 Glutamate methyltransferase family signature 49 62 2.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 PRINTS PR00996 Glutamate methyltransferase family signature 155 171 2.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 PRINTS PR00996 Glutamate methyltransferase family signature 227 241 2.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 2.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 Gene3D G3DSA:1.10.155.10 14 93 2.4E-32 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 PIRSF PIRSF000410 10 288 4.7E-99 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 282 3.6E-58 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 SUPERFAMILY SSF47757 19 94 2.88E-24 T 14-10-2018 BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 SUPERFAMILY SSF53335 95 284 5.42E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 Gene3D G3DSA:3.40.50.150 94 287 1.0E-71 T 14-10-2018 BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 SMART SM00138 27 287 8.3E-114 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BD65_711 48f9d58e469bbd904d88bbe15b7cb058 290 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 80 5.9E-18 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BD65_2332 a76a19ae98e2d83a27dd19f46174f17a 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 4.5E-46 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BD65_2332 a76a19ae98e2d83a27dd19f46174f17a 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 59.324 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BD65_2332 a76a19ae98e2d83a27dd19f46174f17a 312 PIRSF PIRSF000102 1 310 1.8E-59 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BD65_2332 a76a19ae98e2d83a27dd19f46174f17a 312 SUPERFAMILY SSF51735 1 145 3.55E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2332 a76a19ae98e2d83a27dd19f46174f17a 312 Gene3D G3DSA:3.90.110.10 147 312 1.2E-53 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BD65_2332 a76a19ae98e2d83a27dd19f46174f17a 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 3.2E-50 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BD65_2332 a76a19ae98e2d83a27dd19f46174f17a 312 SUPERFAMILY SSF56327 146 311 2.47E-41 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BD65_2332 a76a19ae98e2d83a27dd19f46174f17a 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 7.0E-136 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 BD65_2332 a76a19ae98e2d83a27dd19f46174f17a 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 BD65_2332 a76a19ae98e2d83a27dd19f46174f17a 312 Gene3D G3DSA:3.40.50.720 1 146 1.8E-64 T 14-10-2018 BD65_1162 978713733aa6182160da29b9d49ebcea 343 SUPERFAMILY SSF55021 248 343 3.32E-25 T 14-10-2018 BD65_1162 978713733aa6182160da29b9d49ebcea 343 Gene3D G3DSA:3.40.50.300 1 232 1.1E-77 T 14-10-2018 BD65_1162 978713733aa6182160da29b9d49ebcea 343 Gene3D G3DSA:3.30.70.260 233 343 1.1E-37 T 14-10-2018 BD65_1162 978713733aa6182160da29b9d49ebcea 343 Pfam PF09383 NIL domain 268 339 6.7E-19 T 14-10-2018 IPR018449 NIL domain BD65_1162 978713733aa6182160da29b9d49ebcea 343 SUPERFAMILY SSF52540 1 240 1.61E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1162 978713733aa6182160da29b9d49ebcea 343 Pfam PF00005 ABC transporter 21 169 7.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1162 978713733aa6182160da29b9d49ebcea 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 6.3E-195 T 14-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 BD65_1162 978713733aa6182160da29b9d49ebcea 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1162 978713733aa6182160da29b9d49ebcea 343 SMART SM00382 30 217 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1162 978713733aa6182160da29b9d49ebcea 343 SMART SM00930 265 340 1.2E-24 T 14-10-2018 IPR018449 NIL domain BD65_610 bedebd4307577aeba20b569850129bfd 461 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site BD65_610 bedebd4307577aeba20b569850129bfd 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 9.9E-15 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_610 bedebd4307577aeba20b569850129bfd 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 405 422 9.9E-15 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_610 bedebd4307577aeba20b569850129bfd 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 9.9E-15 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_610 bedebd4307577aeba20b569850129bfd 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 384 395 9.9E-15 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_610 bedebd4307577aeba20b569850129bfd 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 429 441 9.9E-15 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_610 bedebd4307577aeba20b569850129bfd 461 Gene3D G3DSA:3.20.20.80 3 459 1.7E-151 T 14-10-2018 BD65_610 bedebd4307577aeba20b569850129bfd 461 SUPERFAMILY SSF51445 1 460 2.14E-159 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_610 bedebd4307577aeba20b569850129bfd 461 Pfam PF00232 Glycosyl hydrolase family 1 2 460 1.1E-134 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_298 e6c47719284cb238c939ae626b2d837e 890 SUPERFAMILY SSF52016 630 890 3.14E-88 T 14-10-2018 BD65_298 e6c47719284cb238c939ae626b2d837e 890 Gene3D G3DSA:3.30.499.10 373 590 3.8E-99 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 PRINTS PR00415 Aconitase family signature 431 442 1.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 PRINTS PR00415 Aconitase family signature 372 386 1.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 PRINTS PR00415 Aconitase family signature 493 506 1.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 PRINTS PR00415 Aconitase family signature 279 292 1.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 PRINTS PR00415 Aconitase family signature 170 178 1.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 PRINTS PR00415 Aconitase family signature 203 216 1.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 PRINTS PR00415 Aconitase family signature 146 159 1.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 PRINTS PR00415 Aconitase family signature 217 232 1.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 PRINTS PR00415 Aconitase family signature 293 306 1.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 Gene3D G3DSA:1.10.1440.20 592 651 1.3E-17 T 14-10-2018 BD65_298 e6c47719284cb238c939ae626b2d837e 890 Pfam PF00694 Aconitase C-terminal domain 691 817 3.7E-49 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 SUPERFAMILY SSF53732 10 626 1.27E-221 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 890 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 BD65_298 e6c47719284cb238c939ae626b2d837e 890 Gene3D G3DSA:3.20.19.10 652 890 4.1E-105 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 Gene3D G3DSA:3.30.499.20 6 372 1.5E-158 T 14-10-2018 BD65_298 e6c47719284cb238c939ae626b2d837e 890 Pfam PF00330 Aconitase family (aconitate hydratase) 74 562 1.1E-180 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_298 e6c47719284cb238c939ae626b2d837e 890 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BD65_3257 8006291156fcee0e8b6a85713d872cc0 440 Gene3D G3DSA:1.10.225.40 353 440 1.4E-42 T 14-10-2018 IPR038198 MukF, C-terminal domain superfamily BD65_3257 8006291156fcee0e8b6a85713d872cc0 440 Gene3D G3DSA:1.10.10.10 24 118 1.3E-52 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_3257 8006291156fcee0e8b6a85713d872cc0 440 Gene3D G3DSA:1.20.58.590 119 311 1.1E-86 T 14-10-2018 IPR036141 MukF, middle domain superfamily BD65_3257 8006291156fcee0e8b6a85713d872cc0 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.431 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 BD65_3257 8006291156fcee0e8b6a85713d872cc0 440 SUPERFAMILY SSF46785 8 118 6.53E-49 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_3257 8006291156fcee0e8b6a85713d872cc0 440 PIRSF PIRSF018282 1 440 4.0E-247 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 BD65_3257 8006291156fcee0e8b6a85713d872cc0 440 Pfam PF03882 MukF winged-helix domain 3 117 7.8E-58 T 14-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain BD65_3257 8006291156fcee0e8b6a85713d872cc0 440 Pfam PF17193 MukF C-terminal domain 283 440 1.7E-79 T 14-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain BD65_3257 8006291156fcee0e8b6a85713d872cc0 440 SUPERFAMILY SSF140570 119 281 1.14E-75 T 14-10-2018 IPR036141 MukF, middle domain superfamily BD65_3257 8006291156fcee0e8b6a85713d872cc0 440 Pfam PF17192 MukF middle domain 121 281 4.7E-84 T 14-10-2018 IPR033440 Chromosome partition protein MukF, middle domain BD65_272 27fea135f5b54d1e7c57faa929d95a97 222 Gene3D G3DSA:3.40.50.12740 17 207 3.2E-12 T 14-10-2018 BD65_272 27fea135f5b54d1e7c57faa929d95a97 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 7.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_272 27fea135f5b54d1e7c57faa929d95a97 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 7.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_272 27fea135f5b54d1e7c57faa929d95a97 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 7.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_272 27fea135f5b54d1e7c57faa929d95a97 222 SMART SM00421 144 201 3.4E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_272 27fea135f5b54d1e7c57faa929d95a97 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_272 27fea135f5b54d1e7c57faa929d95a97 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 198 1.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_272 27fea135f5b54d1e7c57faa929d95a97 222 SUPERFAMILY SSF46894 140 206 3.74E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2159 02f04311ffb28516a8b980426d92ee63 326 Hamap MF_02021 Cell division protein DamX [damX]. 1 326 25.453 T 14-10-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 BD65_2159 02f04311ffb28516a8b980426d92ee63 326 Gene3D G3DSA:3.30.70.1070 221 325 9.9E-33 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BD65_2159 02f04311ffb28516a8b980426d92ee63 326 SUPERFAMILY SSF110997 242 305 5.1E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BD65_2159 02f04311ffb28516a8b980426d92ee63 326 Pfam PF05036 Sporulation related domain 242 315 8.6E-10 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 BD65_3105 25e4664ee523a1942dbb84a2d29cd6f0 305 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 32 282 2.6E-77 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 BD65_3105 25e4664ee523a1942dbb84a2d29cd6f0 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 270 6.1E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_3105 25e4664ee523a1942dbb84a2d29cd6f0 305 Gene3D G3DSA:1.10.3720.10 81 282 4.4E-25 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3105 25e4664ee523a1942dbb84a2d29cd6f0 305 SUPERFAMILY SSF161098 84 274 1.41E-27 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 96 8.8E-5 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 SUPERFAMILY SSF52343 100 231 6.29E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 1.2E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 1.2E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 1.2E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 1.2E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 1.2E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 Gene3D G3DSA:2.40.30.10 2 98 1.1E-23 T 14-10-2018 BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 1.7E-22 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 Gene3D G3DSA:3.40.50.80 99 233 1.2E-27 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_1678 26aefe408160cd0bbc2318ee5c452b06 233 SUPERFAMILY SSF63380 3 97 9.68E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BD65_555 122c8345cb7470a9d02bef67c1e44c11 393 SUPERFAMILY SSF52440 4 112 2.01E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BD65_555 122c8345cb7470a9d02bef67c1e44c11 393 Pfam PF02222 ATP-grasp domain 123 295 2.5E-56 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BD65_555 122c8345cb7470a9d02bef67c1e44c11 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 5.2E-190 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BD65_555 122c8345cb7470a9d02bef67c1e44c11 393 Gene3D G3DSA:3.40.50.20 2 122 3.7E-54 T 14-10-2018 BD65_555 122c8345cb7470a9d02bef67c1e44c11 393 Gene3D G3DSA:3.30.470.20 197 390 2.3E-61 T 14-10-2018 BD65_555 122c8345cb7470a9d02bef67c1e44c11 393 SUPERFAMILY SSF51246 320 390 9.1E-20 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BD65_555 122c8345cb7470a9d02bef67c1e44c11 393 SUPERFAMILY SSF56059 113 314 9.02E-55 T 14-10-2018 BD65_555 122c8345cb7470a9d02bef67c1e44c11 393 Gene3D G3DSA:3.30.1490.20 123 196 2.5E-31 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BD65_555 122c8345cb7470a9d02bef67c1e44c11 393 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 391 51.931 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BD65_3214 9d83f7ca9d80629d50234e998d8ed5d4 550 Gene3D G3DSA:1.20.1270.20 149 232 2.0E-29 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 BD65_3214 9d83f7ca9d80629d50234e998d8ed5d4 550 Gene3D G3DSA:1.20.1270.20 1 140 2.9E-37 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 BD65_3214 9d83f7ca9d80629d50234e998d8ed5d4 550 Gene3D G3DSA:3.40.50.2030 380 548 1.5E-58 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 BD65_3214 9d83f7ca9d80629d50234e998d8ed5d4 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.627 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 BD65_3214 9d83f7ca9d80629d50234e998d8ed5d4 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 1.4E-241 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 BD65_3214 9d83f7ca9d80629d50234e998d8ed5d4 550 Gene3D G3DSA:3.40.50.2030 234 379 3.1E-59 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 BD65_3214 9d83f7ca9d80629d50234e998d8ed5d4 550 SUPERFAMILY SSF56821 1 548 4.27E-186 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 BD65_3214 9d83f7ca9d80629d50234e998d8ed5d4 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 544 3.2E-158 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 BD65_3214 9d83f7ca9d80629d50234e998d8ed5d4 550 PIRSF PIRSF000076 1 550 1.6E-239 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 BD65_2373 a00f7e5d2fec2b05dd9d805d00ce36c2 146 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 6 143 35.237 T 14-10-2018 IPR011194 Uncharacterised protein family UPF0306 BD65_2373 a00f7e5d2fec2b05dd9d805d00ce36c2 146 PIRSF PIRSF009554 3 146 1.1E-62 T 14-10-2018 IPR011194 Uncharacterised protein family UPF0306 BD65_2373 a00f7e5d2fec2b05dd9d805d00ce36c2 146 SUPERFAMILY SSF50475 5 141 3.47E-16 T 14-10-2018 BD65_2373 a00f7e5d2fec2b05dd9d805d00ce36c2 146 Gene3D G3DSA:2.30.110.10 1 141 3.4E-12 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 Gene3D G3DSA:1.10.260.40 5 64 5.8E-7 T 14-10-2018 BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 Pfam PF01381 Helix-turn-helix 7 58 2.7E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 3.9E-153 T 14-10-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0000309|GO:0009435 KEGG: 00760+2.7.7.1+2.7.1.22 BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 SUPERFAMILY SSF47413 6 59 1.21E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 Pfam PF13521 AAA domain 234 394 9.0E-33 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 SUPERFAMILY SSF52540 232 405 5.96E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 SUPERFAMILY SSF52374 65 234 9.65E-21 T 14-10-2018 BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 Gene3D G3DSA:3.40.50.300 231 399 2.2E-57 T 14-10-2018 BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 7.1E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 SMART SM00530 6 62 1.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 PIRSF PIRSF004776 2 415 3.4E-215 T 14-10-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 BD65_2482 7cc8b32c8363ac85ee8946a6f4cd1be1 429 Gene3D G3DSA:3.40.50.620 65 230 1.2E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2893 cc96481e4bde60e6387e28843203eb88 911 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 368 872 4.3E-84 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 SUPERFAMILY SSF81665 363 862 4.58E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 SUPERFAMILY SSF55008 174 243 4.71E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 446 460 1.1E-25 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 731 1.1E-25 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 818 830 1.1E-25 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 612 1.1E-25 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 742 752 1.1E-25 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 795 814 1.1E-25 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 SUPERFAMILY SSF81653 399 496 6.93E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Pfam PF00122 E1-E2 ATPase 397 577 4.0E-50 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 180 238 5.9E-9 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Gene3D G3DSA:2.70.150.20 389 501 2.5E-32 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Gene3D G3DSA:3.30.70.100 178 241 4.8E-20 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Gene3D G3DSA:3.30.70.100 71 132 1.4E-12 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Gene3D G3DSA:3.40.50.1000 579 847 2.4E-92 T 14-10-2018 IPR023214 HAD superfamily BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Pfam PF00403 Heavy-metal-associated domain 8 62 8.4E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Pfam PF00403 Heavy-metal-associated domain 184 236 2.1E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Pfam PF00403 Heavy-metal-associated domain 73 128 2.0E-7 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 329 904 2.3E-181 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Pfam PF00702 haloacid dehalogenase-like hydrolase 595 809 5.2E-50 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 ProSitePatterns PS01047 Heavy-metal-associated domain. 182 211 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Gene3D G3DSA:3.30.70.100 6 65 2.4E-12 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00943 Copper-transporting ATPase signature 519 533 6.4E-8 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00943 Copper-transporting ATPase signature 314 333 6.4E-8 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00943 Copper-transporting ATPase signature 581 596 6.4E-8 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00943 Copper-transporting ATPase signature 772 789 6.4E-8 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 PRINTS PR00943 Copper-transporting ATPase signature 386 404 6.4E-8 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 600 606 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 SUPERFAMILY SSF55008 3 65 5.89E-13 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 363 905 9.9E-113 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 Gene3D G3DSA:3.40.1110.10 609 727 2.4E-92 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 310 904 3.0E-186 T 14-10-2018 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 SUPERFAMILY SSF55008 71 133 1.44E-11 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BD65_2893 cc96481e4bde60e6387e28843203eb88 911 SUPERFAMILY SSF56784 596 901 3.74E-62 T 14-10-2018 IPR036412 HAD-like superfamily BD65_3100 c040393af27c25c8a01fb3b37f8073d9 367 Pfam PF05076 Suppressor of fused protein (SUFU) 201 363 5.8E-20 T 14-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 BD65_2632 a3cb93af712e69146badc19c2e2891d7 213 SUPERFAMILY SSF52540 36 207 1.71E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2632 a3cb93af712e69146badc19c2e2891d7 213 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 22 205 2.0E-82 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BD65_2632 a3cb93af712e69146badc19c2e2891d7 213 Gene3D G3DSA:3.40.50.300 17 213 3.0E-75 T 14-10-2018 BD65_2632 a3cb93af712e69146badc19c2e2891d7 213 Pfam PF01583 Adenylylsulphate kinase 39 191 8.6E-70 T 14-10-2018 BD65_2632 a3cb93af712e69146badc19c2e2891d7 213 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 38 209 37.14 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BD65_440 d06c01a99c8396a577130aa5b035926f 192 PIRSF PIRSF000349 1 192 7.2E-85 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 SUPERFAMILY SSF46609 1 83 9.69E-36 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 7.4E-39 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.9E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 4.9E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 4.9E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.9E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 4.9E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.3E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 Gene3D G3DSA:2.40.500.20 84 192 5.8E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 Gene3D G3DSA:1.10.287.990 20 82 1.0E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_440 d06c01a99c8396a577130aa5b035926f 192 SUPERFAMILY SSF54719 82 191 4.84E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_61 bcebf84f86335dcead44f2e6ce93ca13 341 Pfam PF02618 YceG-like family 44 329 6.9E-81 T 14-10-2018 IPR003770 Endolytic murein transglycosylase BD65_61 bcebf84f86335dcead44f2e6ce93ca13 341 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 6 333 33.241 T 14-10-2018 IPR003770 Endolytic murein transglycosylase BD65_61 bcebf84f86335dcead44f2e6ce93ca13 341 Gene3D G3DSA:3.30.160.60 72 110 1.6E-22 T 14-10-2018 BD65_61 bcebf84f86335dcead44f2e6ce93ca13 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 8 338 6.4E-123 T 14-10-2018 IPR003770 Endolytic murein transglycosylase BD65_61 bcebf84f86335dcead44f2e6ce93ca13 341 Gene3D G3DSA:3.30.160.60 303 341 8.1E-21 T 14-10-2018 BD65_1751 5957303fef70ec4538d3a77039c0f2fb 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 6.1E-22 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BD65_1751 5957303fef70ec4538d3a77039c0f2fb 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 300 6.7E-107 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 BD65_1751 5957303fef70ec4538d3a77039c0f2fb 303 Gene3D G3DSA:1.10.150.130 9 103 1.3E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BD65_1751 5957303fef70ec4538d3a77039c0f2fb 303 SUPERFAMILY SSF56349 113 296 1.06E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_1751 5957303fef70ec4538d3a77039c0f2fb 303 Pfam PF00589 Phage integrase family 117 284 1.9E-51 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_1751 5957303fef70ec4538d3a77039c0f2fb 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 298 55.99 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BD65_1751 5957303fef70ec4538d3a77039c0f2fb 303 SUPERFAMILY SSF47823 11 102 1.96E-9 T 14-10-2018 BD65_1751 5957303fef70ec4538d3a77039c0f2fb 303 Gene3D G3DSA:1.10.443.10 116 292 1.1E-56 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BD65_2325 a1b2e6a773af1b8f9a2ac4cd1f0c9f2e 578 Gene3D G3DSA:3.10.20.310 190 266 7.3E-24 T 14-10-2018 BD65_2325 a1b2e6a773af1b8f9a2ac4cd1f0c9f2e 578 Gene3D G3DSA:3.10.20.310 102 189 2.4E-29 T 14-10-2018 BD65_2325 a1b2e6a773af1b8f9a2ac4cd1f0c9f2e 578 Gene3D G3DSA:2.40.160.50 267 578 2.1E-124 T 14-10-2018 BD65_2325 a1b2e6a773af1b8f9a2ac4cd1f0c9f2e 578 Pfam PF01103 Surface antigen 295 575 1.7E-31 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BD65_2325 a1b2e6a773af1b8f9a2ac4cd1f0c9f2e 578 Gene3D G3DSA:3.10.20.310 21 101 2.3E-30 T 14-10-2018 BD65_2325 a1b2e6a773af1b8f9a2ac4cd1f0c9f2e 578 Pfam PF07244 Surface antigen variable number repeat 190 250 9.0E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BD65_2325 a1b2e6a773af1b8f9a2ac4cd1f0c9f2e 578 Pfam PF17243 POTRA domain TamA domain 1 26 99 1.2E-20 T 14-10-2018 IPR035243 TamA, POTRA domain 1 BD65_1227 30140f08d79c3f4362069c2247b8a590 289 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 284 20.363 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BD65_1227 30140f08d79c3f4362069c2247b8a590 289 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BD65_1227 30140f08d79c3f4362069c2247b8a590 289 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 285 1.3E-103 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BD65_1227 30140f08d79c3f4362069c2247b8a590 289 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 279 2.7E-79 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BD65_3232 8d0b69ce66cb245edbf573943cca6d67 447 Gene3D G3DSA:3.40.50.300 1 164 9.7E-48 T 14-10-2018 BD65_3232 8d0b69ce66cb245edbf573943cca6d67 447 Gene3D G3DSA:1.20.272.10 241 345 7.6E-44 T 14-10-2018 BD65_3232 8d0b69ce66cb245edbf573943cca6d67 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 3.8E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_3232 8d0b69ce66cb245edbf573943cca6d67 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 4.8E-64 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal BD65_3232 8d0b69ce66cb245edbf573943cca6d67 447 SUPERFAMILY SSF52540 6 237 1.93E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3232 8d0b69ce66cb245edbf573943cca6d67 447 SUPERFAMILY SSF48019 252 434 5.67E-71 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BD65_3232 8d0b69ce66cb245edbf573943cca6d67 447 Pfam PF16193 AAA C-terminal domain 188 267 3.3E-22 T 14-10-2018 IPR032423 AAA C-terminal domain BD65_3232 8d0b69ce66cb245edbf573943cca6d67 447 Gene3D G3DSA:1.10.8.60 165 240 4.9E-27 T 14-10-2018 BD65_3232 8d0b69ce66cb245edbf573943cca6d67 447 Gene3D G3DSA:1.10.3710.10 346 447 1.5E-37 T 14-10-2018 BD65_3232 8d0b69ce66cb245edbf573943cca6d67 447 SMART SM00382 49 165 4.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.182 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 SUPERFAMILY SSF54980 393 468 1.01E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 529 0.0 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 Gene3D G3DSA:3.30.70.3280 390 529 6.7E-52 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 153 1.3E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 Gene3D G3DSA:3.40.50.300 110 275 1.3E-118 T 14-10-2018 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 Gene3D G3DSA:3.40.50.300 72 379 1.3E-118 T 14-10-2018 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 SUPERFAMILY SSF50447 262 393 4.2E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 7.2E-46 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 2.6E-12 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 SUPERFAMILY SSF52540 10 277 4.01E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2469 8a78f49502203b75ea43e3a9c9e6d0f3 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 9.0E-46 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal BD65_2021 39618b3357c08eb0edb5b9a810537334 270 SUPERFAMILY SSF56784 1 269 5.52E-78 T 14-10-2018 IPR036412 HAD-like superfamily BD65_2021 39618b3357c08eb0edb5b9a810537334 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 14-10-2018 BD65_2021 39618b3357c08eb0edb5b9a810537334 270 Gene3D G3DSA:3.40.50.1000 5 265 3.7E-94 T 14-10-2018 IPR023214 HAD superfamily BD65_2021 39618b3357c08eb0edb5b9a810537334 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 6.4E-69 T 14-10-2018 IPR000150 Cof family GO:0016787 BD65_2021 39618b3357c08eb0edb5b9a810537334 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 14-10-2018 BD65_2021 39618b3357c08eb0edb5b9a810537334 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 2.7E-68 T 14-10-2018 BD65_2021 39618b3357c08eb0edb5b9a810537334 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 4.3E-28 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BD65_2021 39618b3357c08eb0edb5b9a810537334 270 Gene3D G3DSA:3.30.1240.10 87 193 3.7E-94 T 14-10-2018 BD65_2861 4903e050c74fb50fa0e01a8452d749ed 187 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 15 183 7.4E-72 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BD65_2861 4903e050c74fb50fa0e01a8452d749ed 187 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 15 184 38.527 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BD65_2861 4903e050c74fb50fa0e01a8452d749ed 187 SUPERFAMILY SSF53271 18 184 1.01E-52 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BD65_2861 4903e050c74fb50fa0e01a8452d749ed 187 Gene3D G3DSA:3.40.50.2020 2 187 2.0E-68 T 14-10-2018 BD65_2861 4903e050c74fb50fa0e01a8452d749ed 187 Pfam PF00156 Phosphoribosyl transferase domain 35 170 2.4E-16 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BD65_64 44f799018dd5e8f5594f0bd792e3b96b 270 SUPERFAMILY SSF51556 1 257 7.45E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_64 44f799018dd5e8f5594f0bd792e3b96b 270 PIRSF PIRSF005902 1 258 2.0E-73 T 14-10-2018 IPR001130 TatD family GO:0016788 BD65_64 44f799018dd5e8f5594f0bd792e3b96b 270 Pfam PF01026 TatD related DNase 4 255 7.0E-76 T 14-10-2018 IPR001130 TatD family GO:0016788 BD65_64 44f799018dd5e8f5594f0bd792e3b96b 270 Gene3D G3DSA:3.20.20.140 1 263 2.2E-98 T 14-10-2018 BD65_64 44f799018dd5e8f5594f0bd792e3b96b 270 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BD65_64 44f799018dd5e8f5594f0bd792e3b96b 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BD65_64 44f799018dd5e8f5594f0bd792e3b96b 270 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 2.3E-90 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 BD65_1185 0868430d6390ed71445f29768df0bc6f 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BD65_1185 0868430d6390ed71445f29768df0bc6f 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 5.4E-123 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 BD65_1185 0868430d6390ed71445f29768df0bc6f 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BD65_1185 0868430d6390ed71445f29768df0bc6f 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 3.1E-24 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 BD65_1185 0868430d6390ed71445f29768df0bc6f 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.621 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 BD65_1185 0868430d6390ed71445f29768df0bc6f 340 Gene3D G3DSA:2.160.10.10 100 309 3.8E-67 T 14-10-2018 BD65_1185 0868430d6390ed71445f29768df0bc6f 340 SUPERFAMILY SSF51161 33 316 2.5E-86 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BD65_1185 0868430d6390ed71445f29768df0bc6f 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.6E-9 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_1185 0868430d6390ed71445f29768df0bc6f 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 4.8E-7 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_1185 0868430d6390ed71445f29768df0bc6f 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 256 3.2E-8 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_1185 0868430d6390ed71445f29768df0bc6f 340 Gene3D G3DSA:3.40.1390.10 1 99 2.9E-37 T 14-10-2018 BD65_1165 80095395cc9b7510b6892e64c02da213 136 Pfam PF16358 RcsF lipoprotein 39 134 4.0E-53 T 14-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 BD65_1165 80095395cc9b7510b6892e64c02da213 136 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 135 37.263 T 14-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 BD65_1165 80095395cc9b7510b6892e64c02da213 136 Gene3D G3DSA:3.30.110.70 32 136 2.2E-40 T 14-10-2018 BD65_927 90e3c29d5db60a2a40ff9ee68ae82c0f 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_927 90e3c29d5db60a2a40ff9ee68ae82c0f 287 Gene3D G3DSA:3.40.190.290 94 266 1.1E-18 T 14-10-2018 BD65_927 90e3c29d5db60a2a40ff9ee68ae82c0f 287 Pfam PF03466 LysR substrate binding domain 91 285 1.8E-25 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_927 90e3c29d5db60a2a40ff9ee68ae82c0f 287 SUPERFAMILY SSF53850 91 284 3.39E-29 T 14-10-2018 BD65_927 90e3c29d5db60a2a40ff9ee68ae82c0f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_927 90e3c29d5db60a2a40ff9ee68ae82c0f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_927 90e3c29d5db60a2a40ff9ee68ae82c0f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_927 90e3c29d5db60a2a40ff9ee68ae82c0f 287 SUPERFAMILY SSF46785 6 81 1.66E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_927 90e3c29d5db60a2a40ff9ee68ae82c0f 287 Gene3D G3DSA:1.10.10.10 1 85 5.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1553 cd09b07e0aafe2d02590e2385564f281 150 SUPERFAMILY SSF52304 4 146 5.23E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BD65_1553 cd09b07e0aafe2d02590e2385564f281 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 75.416 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BD65_1553 cd09b07e0aafe2d02590e2385564f281 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 150 7.0E-68 T 14-10-2018 BD65_1553 cd09b07e0aafe2d02590e2385564f281 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BD65_1553 cd09b07e0aafe2d02590e2385564f281 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.7E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BD65_1553 cd09b07e0aafe2d02590e2385564f281 150 PIRSF PIRSF001399 3 149 3.2E-59 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BD65_1553 cd09b07e0aafe2d02590e2385564f281 150 Pfam PF01220 Dehydroquinase class II 7 142 3.5E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BD65_1553 cd09b07e0aafe2d02590e2385564f281 150 Gene3D G3DSA:3.40.50.9100 1 150 5.9E-69 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BD65_1749 5626648a294933d8e1cea03d09134c72 720 SUPERFAMILY SSF52540 4 642 9.16E-183 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1749 5626648a294933d8e1cea03d09134c72 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.8E-75 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BD65_1749 5626648a294933d8e1cea03d09134c72 720 Gene3D G3DSA:3.40.50.300 281 636 8.1E-138 T 14-10-2018 BD65_1749 5626648a294933d8e1cea03d09134c72 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 BD65_1749 5626648a294933d8e1cea03d09134c72 720 Gene3D G3DSA:1.10.486.10 382 538 8.1E-138 T 14-10-2018 BD65_1749 5626648a294933d8e1cea03d09134c72 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 3.7E-76 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BD65_1749 5626648a294933d8e1cea03d09134c72 720 Gene3D G3DSA:3.40.50.300 10 274 6.7E-106 T 14-10-2018 BD65_1749 5626648a294933d8e1cea03d09134c72 720 Gene3D G3DSA:1.10.10.160 114 187 6.7E-106 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily BD65_1699 061c92b75e2c48c52b8cb29424e821b7 249 Gene3D G3DSA:3.20.20.190 9 237 2.3E-78 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_1699 061c92b75e2c48c52b8cb29424e821b7 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 240 2.2E-37 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BD65_1699 061c92b75e2c48c52b8cb29424e821b7 249 SUPERFAMILY SSF51695 6 241 8.37E-61 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Gene3D G3DSA:2.40.160.50 426 795 3.6E-144 T 14-10-2018 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Gene3D G3DSA:3.10.20.310 347 425 4.1E-26 T 14-10-2018 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Gene3D G3DSA:3.10.20.310 175 264 4.3E-23 T 14-10-2018 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Pfam PF07244 Surface antigen variable number repeat 348 421 9.2E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Pfam PF07244 Surface antigen variable number repeat 266 344 6.6E-11 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Pfam PF07244 Surface antigen variable number repeat 176 263 3.1E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Pfam PF07244 Surface antigen variable number repeat 92 172 5.3E-11 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Gene3D G3DSA:3.10.20.310 19 91 6.4E-21 T 14-10-2018 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Pfam PF01103 Surface antigen 448 795 7.0E-100 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 PIRSF PIRSF006076 1 795 2.8E-254 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 795 26.07 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Gene3D G3DSA:3.10.20.310 92 174 1.0E-15 T 14-10-2018 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 795 6.5E-285 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BD65_1187 0233d39fb83cae67f919c3844890d4f6 795 Gene3D G3DSA:3.10.20.310 265 346 3.1E-16 T 14-10-2018 BD65_2111 2686595792d67d6e478458dcdb0daed7 331 SUPERFAMILY SSF47413 5 62 1.2E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_2111 2686595792d67d6e478458dcdb0daed7 331 SUPERFAMILY SSF53822 63 317 2.94E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_2111 2686595792d67d6e478458dcdb0daed7 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 312 4.0E-32 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain BD65_2111 2686595792d67d6e478458dcdb0daed7 331 SMART SM00354 5 75 6.0E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_2111 2686595792d67d6e478458dcdb0daed7 331 Gene3D G3DSA:3.40.50.2300 161 292 1.7E-62 T 14-10-2018 BD65_2111 2686595792d67d6e478458dcdb0daed7 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 9.3E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_2111 2686595792d67d6e478458dcdb0daed7 331 Gene3D G3DSA:1.10.260.40 1 61 1.1E-13 T 14-10-2018 BD65_2111 2686595792d67d6e478458dcdb0daed7 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 BD65_2111 2686595792d67d6e478458dcdb0daed7 331 Gene3D G3DSA:3.40.50.2300 67 308 1.7E-62 T 14-10-2018 BD65_2064 c580aa2bd075952608b2df2374aed1ba 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 508 1.8E-220 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_2064 c580aa2bd075952608b2df2374aed1ba 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 BD65_2064 c580aa2bd075952608b2df2374aed1ba 511 Gene3D G3DSA:1.20.200.10 198 509 1.4E-124 T 14-10-2018 BD65_2064 c580aa2bd075952608b2df2374aed1ba 511 Pfam PF00221 Aromatic amino acid lyase 11 471 4.0E-184 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 BD65_2064 c580aa2bd075952608b2df2374aed1ba 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.185 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_2064 c580aa2bd075952608b2df2374aed1ba 511 SUPERFAMILY SSF48557 3 506 7.46E-191 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 BD65_2064 c580aa2bd075952608b2df2374aed1ba 511 Gene3D G3DSA:1.10.275.10 2 197 3.7E-69 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal BD65_795 551c3625ab727a1a7608b1ab90b31adb 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-22 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 BD65_795 551c3625ab727a1a7608b1ab90b31adb 75 SUPERFAMILY SSF158651 1 75 5.49E-31 T 14-10-2018 IPR023202 YejL-like superfamily BD65_795 551c3625ab727a1a7608b1ab90b31adb 75 Gene3D G3DSA:1.10.3390.10 1 75 2.6E-34 T 14-10-2018 IPR023202 YejL-like superfamily BD65_795 551c3625ab727a1a7608b1ab90b31adb 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.26 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 BD65_795 551c3625ab727a1a7608b1ab90b31adb 75 PIRSF PIRSF006188 1 72 1.7E-34 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 BD65_795 551c3625ab727a1a7608b1ab90b31adb 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.8E-23 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 Gene3D G3DSA:3.30.390.30 338 450 1.9E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PIRSF PIRSF000350 1 447 9.8E-86 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 4.0E-66 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 4.0E-66 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 4.0E-66 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 4.0E-66 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 4.0E-66 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.0E-66 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 4.0E-66 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 4.0E-66 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 4.0E-66 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 SUPERFAMILY SSF55424 336 450 1.22E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 Gene3D G3DSA:3.50.50.60 144 261 2.0E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 1.5E-217 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 SUPERFAMILY SSF51905 1 365 1.1E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.2E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 Gene3D G3DSA:3.50.50.60 5 318 2.0E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 2.0E-68 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.3E-28 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.3E-28 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.3E-28 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.3E-28 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.3E-28 T 14-10-2018 BD65_2099 e7a009e7624a905c757ed68bd4f32a34 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BD65_1264 4dd47e343428b98e185f6f63f28b2c68 577 Gene3D G3DSA:2.40.50.460 462 576 2.0E-7 T 14-10-2018 BD65_1264 4dd47e343428b98e185f6f63f28b2c68 577 Pfam PF01368 DHH family 74 178 3.2E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_1264 4dd47e343428b98e185f6f63f28b2c68 577 SUPERFAMILY SSF64182 50 467 8.11E-118 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily BD65_1264 4dd47e343428b98e185f6f63f28b2c68 577 Pfam PF02272 DHHA1 domain 322 452 1.8E-27 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BD65_1264 4dd47e343428b98e185f6f63f28b2c68 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 573 1.2E-159 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 BD65_1264 4dd47e343428b98e185f6f63f28b2c68 577 Gene3D G3DSA:3.90.1640.30 50 326 2.5E-88 T 14-10-2018 BD65_1264 4dd47e343428b98e185f6f63f28b2c68 577 Gene3D G3DSA:3.10.310.30 328 458 3.4E-31 T 14-10-2018 BD65_1400 7cb33c8ad233578d5527a45120064455 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 6.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family BD65_1400 7cb33c8ad233578d5527a45120064455 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 6.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family BD65_1400 7cb33c8ad233578d5527a45120064455 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 6.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family BD65_1400 7cb33c8ad233578d5527a45120064455 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 6.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family BD65_1400 7cb33c8ad233578d5527a45120064455 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 6.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family BD65_1400 7cb33c8ad233578d5527a45120064455 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 6.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family BD65_1400 7cb33c8ad233578d5527a45120064455 337 Pfam PF00814 Glycoprotease family 24 307 1.3E-104 T 14-10-2018 IPR000905 Gcp-like domain BD65_1400 7cb33c8ad233578d5527a45120064455 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.491 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BD65_1400 7cb33c8ad233578d5527a45120064455 337 Gene3D G3DSA:3.30.420.40 129 293 2.9E-134 T 14-10-2018 BD65_1400 7cb33c8ad233578d5527a45120064455 337 SUPERFAMILY SSF53067 3 123 1.55E-31 T 14-10-2018 BD65_1400 7cb33c8ad233578d5527a45120064455 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.8E-137 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BD65_1400 7cb33c8ad233578d5527a45120064455 337 SUPERFAMILY SSF53067 101 309 1.44E-45 T 14-10-2018 BD65_1400 7cb33c8ad233578d5527a45120064455 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 BD65_1400 7cb33c8ad233578d5527a45120064455 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 1.3E-128 T 14-10-2018 IPR017861 Kae1/TsaD family BD65_1400 7cb33c8ad233578d5527a45120064455 337 Gene3D G3DSA:3.30.420.40 3 315 2.9E-134 T 14-10-2018 BD65_3176 763294108df505892e280632e777796d 166 SMART SM01321 14 134 3.9E-41 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_3176 763294108df505892e280632e777796d 166 Gene3D G3DSA:3.30.70.1290 5 141 2.4E-40 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_3176 763294108df505892e280632e777796d 166 SUPERFAMILY SSF143422 6 135 2.75E-44 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_3176 763294108df505892e280632e777796d 166 Pfam PF01797 Transposase IS200 like 16 134 8.7E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_1237 c917ae6b4ae9c5e614da89791ba1f0c6 311 SUPERFAMILY SSF53850 94 301 7.29E-36 T 14-10-2018 BD65_1237 c917ae6b4ae9c5e614da89791ba1f0c6 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1237 c917ae6b4ae9c5e614da89791ba1f0c6 311 Pfam PF03466 LysR substrate binding domain 93 297 1.2E-34 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1237 c917ae6b4ae9c5e614da89791ba1f0c6 311 Gene3D G3DSA:3.40.190.290 96 305 1.6E-34 T 14-10-2018 BD65_1237 c917ae6b4ae9c5e614da89791ba1f0c6 311 Gene3D G3DSA:1.10.10.10 4 95 2.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1237 c917ae6b4ae9c5e614da89791ba1f0c6 311 SUPERFAMILY SSF46785 3 84 2.95E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 SUPERFAMILY SSF53383 130 562 1.38E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 PIRSF PIRSF009393 1 712 2.3E-284 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 Gene3D G3DSA:3.40.640.10 130 424 3.9E-93 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 Gene3D G3DSA:3.90.1150.10 425 594 2.4E-69 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 Gene3D G3DSA:3.90.100.10 595 713 4.0E-48 T 14-10-2018 BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 SUPERFAMILY SSF55904 567 708 8.63E-45 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 3.3E-27 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 5.0E-46 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 2.4E-196 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BD65_654 43ac9c1800e8c4999414cd7262496ea0 713 Gene3D G3DSA:3.40.50.2300 1 129 3.1E-55 T 14-10-2018 BD65_240 60a09b6bf6642d6079432fd84af8c735 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 53 2.8E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_240 60a09b6bf6642d6079432fd84af8c735 276 Gene3D G3DSA:1.10.10.10 1 81 3.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_240 60a09b6bf6642d6079432fd84af8c735 276 SUPERFAMILY SSF46785 2 83 5.99E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2077 a9abfac9a3be590d1f9040fd144dd9a4 326 Gene3D G3DSA:3.40.50.300 1 321 5.9E-93 T 14-10-2018 BD65_2077 a9abfac9a3be590d1f9040fd144dd9a4 326 Pfam PF00005 ABC transporter 24 181 1.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2077 a9abfac9a3be590d1f9040fd144dd9a4 326 SMART SM00382 32 231 2.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2077 a9abfac9a3be590d1f9040fd144dd9a4 326 SUPERFAMILY SSF52540 3 253 7.76E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2077 a9abfac9a3be590d1f9040fd144dd9a4 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 2.8E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_2077 a9abfac9a3be590d1f9040fd144dd9a4 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2077 a9abfac9a3be590d1f9040fd144dd9a4 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 4.9E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_2385 6e472e59d546385b3615ef9933eabc71 144 PIRSF PIRSF000368 1 144 1.6E-55 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 BD65_2385 6e472e59d546385b3615ef9933eabc71 144 ProSitePatterns PS01087 Radical activating enzymes signature. 4 25 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 BD65_2385 6e472e59d546385b3615ef9933eabc71 144 SUPERFAMILY SSF102114 10 115 1.96E-6 T 14-10-2018 BD65_2385 6e472e59d546385b3615ef9933eabc71 144 Gene3D G3DSA:3.20.20.70 1 144 1.7E-20 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2385 6e472e59d546385b3615ef9933eabc71 144 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 1 143 9.0E-59 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 BD65_2385 6e472e59d546385b3615ef9933eabc71 144 Pfam PF13353 4Fe-4S single cluster domain 2 141 1.0E-49 T 14-10-2018 BD65_1745 c6b1edace033b49043e107660c8dcd86 157 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 4 132 3.7E-48 T 14-10-2018 IPR027565 Cupin fold metalloprotein, WbuC family BD65_1745 c6b1edace033b49043e107660c8dcd86 157 SUPERFAMILY SSF51182 25 121 1.54E-17 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BD65_1745 c6b1edace033b49043e107660c8dcd86 157 Gene3D G3DSA:2.60.120.10 13 128 3.1E-10 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 SUPERFAMILY SSF81301 13 286 1.96E-89 T 14-10-2018 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Gene3D G3DSA:3.30.460.10 111 284 2.7E-66 T 14-10-2018 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Gene3D G3DSA:1.10.4050.10 1 110 2.5E-30 T 14-10-2018 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 27 944 19.387 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Gene3D G3DSA:1.20.120.330 285 440 1.6E-54 T 14-10-2018 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 SUPERFAMILY SSF81301 525 814 5.76E-90 T 14-10-2018 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Gene3D G3DSA:1.20.120.330 812 944 4.3E-46 T 14-10-2018 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Gene3D G3DSA:1.20.120.1510 450 561 2.8E-31 T 14-10-2018 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 SUPERFAMILY SSF81593 287 436 1.1E-41 T 14-10-2018 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 3.5E-43 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Pfam PF08335 GlnD PII-uridylyltransferase 825 917 2.0E-9 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Gene3D G3DSA:3.30.460.100 562 811 2.4E-97 T 14-10-2018 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 275 1.1E-92 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 804 1.9E-98 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 BD65_1393 0b970f7cdd4196cd1dfa176bbe19919a 944 SUPERFAMILY SSF81593 815 943 1.1E-32 T 14-10-2018 BD65_2636 38769119d43622acf3d4c8728b01659d 160 Gene3D G3DSA:3.30.1330.50 1 160 6.0E-72 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BD65_2636 38769119d43622acf3d4c8728b01659d 160 Pfam PF02542 YgbB family 1 154 1.3E-66 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BD65_2636 38769119d43622acf3d4c8728b01659d 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BD65_2636 38769119d43622acf3d4c8728b01659d 160 SUPERFAMILY SSF69765 1 157 2.62E-66 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BD65_2636 38769119d43622acf3d4c8728b01659d 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 2.5E-71 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BD65_2636 38769119d43622acf3d4c8728b01659d 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.601 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BD65_2146 78571f09f2ea33fa82fab5fe70526096 292 Gene3D G3DSA:3.90.1280.10 226 283 2.9E-23 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BD65_2146 78571f09f2ea33fa82fab5fe70526096 292 SUPERFAMILY SSF64397 4 232 3.01E-76 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BD65_2146 78571f09f2ea33fa82fab5fe70526096 292 PIRSF PIRSF005261 1 284 1.7E-74 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BD65_2146 78571f09f2ea33fa82fab5fe70526096 292 Pfam PF01430 Hsp33 protein 5 273 8.7E-86 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BD65_2146 78571f09f2ea33fa82fab5fe70526096 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 33.24 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BD65_2146 78571f09f2ea33fa82fab5fe70526096 292 SUPERFAMILY SSF118352 225 281 1.07E-19 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BD65_2146 78571f09f2ea33fa82fab5fe70526096 292 Gene3D G3DSA:1.10.287.480 177 225 5.0E-23 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily BD65_2146 78571f09f2ea33fa82fab5fe70526096 292 Gene3D G3DSA:3.55.30.10 1 176 1.1E-65 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BD65_959 82ff559bb881db1f157cfefac8d4baa3 296 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 3.0E-52 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_959 82ff559bb881db1f157cfefac8d4baa3 296 Gene3D G3DSA:3.20.20.70 1 295 9.1E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_959 82ff559bb881db1f157cfefac8d4baa3 296 SUPERFAMILY SSF51569 1 292 1.04E-72 T 14-10-2018 BD65_959 82ff559bb881db1f157cfefac8d4baa3 296 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_959 82ff559bb881db1f157cfefac8d4baa3 296 SMART SM01130 3 294 4.9E-69 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_959 82ff559bb881db1f157cfefac8d4baa3 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 3.6E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_959 82ff559bb881db1f157cfefac8d4baa3 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 3.6E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_959 82ff559bb881db1f157cfefac8d4baa3 296 PIRSF PIRSF001365 1 296 8.6E-67 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_2735 571be4fd1bdfbf8ac18f58787c133abe 243 Pfam PF13525 Outer membrane lipoprotein 28 236 3.4E-83 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like BD65_2735 571be4fd1bdfbf8ac18f58787c133abe 243 SUPERFAMILY SSF48452 27 119 1.14E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2735 571be4fd1bdfbf8ac18f58787c133abe 243 Gene3D G3DSA:1.25.40.10 29 243 1.7E-62 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2735 571be4fd1bdfbf8ac18f58787c133abe 243 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 2.1E-88 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD BD65_2735 571be4fd1bdfbf8ac18f58787c133abe 243 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 38.587 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD BD65_2527 9b814709e0583a3f16fd1d8809b34e12 217 SUPERFAMILY SSF55120 6 214 1.44E-60 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2527 9b814709e0583a3f16fd1d8809b34e12 217 Gene3D G3DSA:3.30.2350.10 2 217 3.3E-71 T 14-10-2018 BD65_2527 9b814709e0583a3f16fd1d8809b34e12 217 Pfam PF00849 RNA pseudouridylate synthase 20 167 7.7E-27 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2527 9b814709e0583a3f16fd1d8809b34e12 217 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 58 72 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 SUPERFAMILY SSF51735 2 169 1.81E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 Gene3D G3DSA:3.90.110.10 170 435 9.7E-105 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 SUPERFAMILY SSF56327 172 435 5.11E-96 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 4.0E-45 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.0E-45 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 4.0E-45 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 4.0E-45 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 4.0E-45 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.0E-45 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 4.0E-45 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 Pfam PF02056 Family 4 glycosyl hydrolase 5 185 3.1E-55 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 Gene3D G3DSA:3.40.50.720 1 169 9.3E-61 T 14-10-2018 BD65_2173 60d34ba2c82404253f2c23e2a6e0bf6e 435 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 3.0E-54 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 BD65_519 7542537ca1640e82e842de7642655edf 679 SUPERFAMILY SSF52096 168 536 2.32E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_519 7542537ca1640e82e842de7642655edf 679 SUPERFAMILY SSF50156 217 344 1.33E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BD65_519 7542537ca1640e82e842de7642655edf 679 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 199 552 5.3E-124 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BD65_519 7542537ca1640e82e842de7642655edf 679 Gene3D G3DSA:3.90.226.10 340 546 5.7E-51 T 14-10-2018 BD65_519 7542537ca1640e82e842de7642655edf 679 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 241 321 7.6E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_519 7542537ca1640e82e842de7642655edf 679 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 535 668 5.5E-40 T 14-10-2018 IPR020992 Tail specific protease, C-terminal BD65_519 7542537ca1640e82e842de7642655edf 679 Gene3D G3DSA:2.30.42.10 247 339 3.7E-16 T 14-10-2018 BD65_519 7542537ca1640e82e842de7642655edf 679 SMART SM00245 327 532 4.7E-78 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BD65_519 7542537ca1640e82e842de7642655edf 679 SMART SM00228 247 324 2.4E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_519 7542537ca1640e82e842de7642655edf 679 Pfam PF03572 Peptidase family S41 357 530 1.4E-52 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 165 172 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 Gene3D G3DSA:3.50.30.10 251 474 4.7E-50 T 14-10-2018 BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 Gene3D G3DSA:1.10.274.10 268 393 4.7E-50 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 SUPERFAMILY SSF52009 373 475 5.1E-21 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 Pfam PF00391 PEP-utilising enzyme, mobile domain 398 471 3.0E-13 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 PRINTS PR00107 Phosphocarrier protein signature 205 222 2.1E-8 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 PRINTS PR00107 Phosphocarrier protein signature 190 205 2.1E-8 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 PRINTS PR00107 Phosphocarrier protein signature 165 181 2.1E-8 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 SUPERFAMILY SSF53062 1 127 4.45E-32 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 SUPERFAMILY SSF55594 155 239 6.02E-20 T 14-10-2018 IPR035895 HPr-like superfamily BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 156 232 2.8E-15 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 Pfam PF05524 PEP-utilising enzyme, N-terminal 251 373 2.1E-21 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 Gene3D G3DSA:3.40.50.510 1 132 9.9E-43 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 Gene3D G3DSA:3.30.1340.10 154 240 1.2E-20 T 14-10-2018 IPR035895 HPr-like superfamily BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 SUPERFAMILY SSF47831 275 390 2.62E-27 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 Pfam PF00381 PTS HPr component phosphorylation site 157 234 1.5E-16 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 125 2.4E-36 T 14-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain BD65_2459 fc43f4796d6b53f5c77c7258a4b434f7 477 Pfam PF03610 PTS system fructose IIA component 4 119 2.2E-24 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 BD65_2377 6deffea00cc07a3756a2bccb38577f92 378 Pfam PF07969 Amidohydrolase family 217 377 9.0E-11 T 14-10-2018 IPR013108 Amidohydrolase 3 BD65_2377 6deffea00cc07a3756a2bccb38577f92 378 PIRSF PIRSF038971 1 378 3.0E-156 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_2377 6deffea00cc07a3756a2bccb38577f92 378 Gene3D G3DSA:3.20.20.140 1 261 1.2E-8 T 14-10-2018 BD65_2377 6deffea00cc07a3756a2bccb38577f92 378 Gene3D G3DSA:3.20.20.140 319 341 6.1E-8 T 14-10-2018 BD65_2377 6deffea00cc07a3756a2bccb38577f92 378 SUPERFAMILY SSF51556 50 345 4.51E-23 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_2377 6deffea00cc07a3756a2bccb38577f92 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 1.6E-156 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_2377 6deffea00cc07a3756a2bccb38577f92 378 Gene3D G3DSA:2.30.40.10 342 375 6.1E-8 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_2377 6deffea00cc07a3756a2bccb38577f92 378 SUPERFAMILY SSF51338 2 377 8.89E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 2.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 115 134 2.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 152 163 2.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 37 47 2.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 257 326 8.5E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 285 293 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 Gene3D G3DSA:3.40.50.80 105 243 2.2E-26 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_3213 c1b0e8e780d159d11b601781df39296b 334 PRINTS PR00406 Cytochrome B5 reductase signature 206 214 2.1E-5 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 PRINTS PR00406 Cytochrome B5 reductase signature 55 62 2.1E-5 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 PRINTS PR00406 Cytochrome B5 reductase signature 115 134 2.1E-5 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 SUPERFAMILY SSF52343 95 236 2.49E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_3213 c1b0e8e780d159d11b601781df39296b 334 Pfam PF00970 Oxidoreductase FAD-binding domain 35 104 2.6E-7 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 Gene3D G3DSA:3.10.20.30 247 334 6.2E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_3213 c1b0e8e780d159d11b601781df39296b 334 SUPERFAMILY SSF63380 11 105 4.64E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BD65_3213 c1b0e8e780d159d11b601781df39296b 334 Pfam PF00175 Oxidoreductase NAD-binding domain 116 219 2.2E-14 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 SUPERFAMILY SSF54292 230 331 6.69E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BD65_3213 c1b0e8e780d159d11b601781df39296b 334 Gene3D G3DSA:2.40.30.10 7 102 4.8E-19 T 14-10-2018 BD65_1869 0aee5034e601d710c3f50f3b2677716f 213 Gene3D G3DSA:2.40.50.230 2 89 3.9E-33 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily BD65_1869 0aee5034e601d710c3f50f3b2677716f 213 Pfam PF04717 Type VI secretion system, phage-baseplate injector 9 119 1.3E-44 T 14-10-2018 IPR006531 Gp5 N-terminal BD65_1869 0aee5034e601d710c3f50f3b2677716f 213 Gene3D G3DSA:2.60.220.40 91 163 3.0E-31 T 14-10-2018 BD65_1869 0aee5034e601d710c3f50f3b2677716f 213 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 11 211 1.9E-66 T 14-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 BD65_1394 12c97f1acd791377805981b16734f776 436 SMART SM01118 2 202 2.4E-38 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BD65_1394 12c97f1acd791377805981b16734f776 436 Gene3D G3DSA:2.40.320.10 1 200 8.3E-37 T 14-10-2018 BD65_1394 12c97f1acd791377805981b16734f776 436 SUPERFAMILY SSF55154 1 218 7.19E-52 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 BD65_1394 12c97f1acd791377805981b16734f776 436 Pfam PF01928 CYTH domain 4 196 1.8E-26 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BD65_391 f81258dd74055822100471978c20d8f8 1176 Pfam PF10371 Domain of unknown function 627 678 1.3E-23 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 BD65_391 f81258dd74055822100471978c20d8f8 1176 SUPERFAMILY SSF54862 665 837 4.06E-21 T 14-10-2018 BD65_391 f81258dd74055822100471978c20d8f8 1176 Gene3D G3DSA:4.10.780.10 633 668 1.7E-7 T 14-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily BD65_391 f81258dd74055822100471978c20d8f8 1176 SUPERFAMILY SSF52518 794 1163 4.65E-117 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_391 f81258dd74055822100471978c20d8f8 1176 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 6.7E-81 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 BD65_391 f81258dd74055822100471978c20d8f8 1176 SUPERFAMILY SSF53323 417 668 2.75E-73 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 BD65_391 f81258dd74055822100471978c20d8f8 1176 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 956 1068 1.8E-8 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BD65_391 f81258dd74055822100471978c20d8f8 1176 Gene3D G3DSA:3.40.50.970 1 254 7.6E-106 T 14-10-2018 BD65_391 f81258dd74055822100471978c20d8f8 1176 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 3.0E-9 T 14-10-2018 BD65_391 f81258dd74055822100471978c20d8f8 1176 SUPERFAMILY SSF52518 2 254 4.12E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_391 f81258dd74055822100471978c20d8f8 1176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_391 f81258dd74055822100471978c20d8f8 1176 SUPERFAMILY SSF52922 255 409 6.12E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BD65_391 f81258dd74055822100471978c20d8f8 1176 Gene3D G3DSA:3.40.50.970 793 1170 1.0E-149 T 14-10-2018 BD65_391 f81258dd74055822100471978c20d8f8 1176 PIRSF PIRSF000159 1 1176 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 BD65_391 f81258dd74055822100471978c20d8f8 1176 Gene3D G3DSA:3.40.920.10 416 623 6.8E-73 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 BD65_391 f81258dd74055822100471978c20d8f8 1176 Gene3D G3DSA:3.30.70.20 669 791 6.6E-37 T 14-10-2018 BD65_391 f81258dd74055822100471978c20d8f8 1176 SMART SM00890 622 679 7.4E-30 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 BD65_391 f81258dd74055822100471978c20d8f8 1176 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 607 3.6E-33 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 BD65_391 f81258dd74055822100471978c20d8f8 1176 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1167 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 BD65_391 f81258dd74055822100471978c20d8f8 1176 Gene3D G3DSA:3.40.50.920 255 414 1.2E-53 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BD65_391 f81258dd74055822100471978c20d8f8 1176 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 350 4.1E-14 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II BD65_3069 60dbf9144f656bc7d134fcc1ca3b149c 423 Pfam PF00202 Aminotransferase class-III 27 420 1.2E-127 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_3069 60dbf9144f656bc7d134fcc1ca3b149c 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_3069 60dbf9144f656bc7d134fcc1ca3b149c 423 PIRSF PIRSF000521 27 423 1.4E-28 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_3069 60dbf9144f656bc7d134fcc1ca3b149c 423 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 423 50.131 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 BD65_3069 60dbf9144f656bc7d134fcc1ca3b149c 423 SUPERFAMILY SSF53383 1 422 1.04E-136 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_3069 60dbf9144f656bc7d134fcc1ca3b149c 423 Gene3D G3DSA:3.90.1150.10 10 414 5.3E-172 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_3069 60dbf9144f656bc7d134fcc1ca3b149c 423 Gene3D G3DSA:3.40.640.10 61 330 5.3E-172 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_3069 60dbf9144f656bc7d134fcc1ca3b149c 423 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 4.8E-184 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 BD65_1303 997e54e2f39679aa4ea8ea9a182b2f04 243 SUPERFAMILY SSF88697 2 70 9.44E-17 T 14-10-2018 IPR015947 PUA-like superfamily BD65_1303 997e54e2f39679aa4ea8ea9a182b2f04 243 Pfam PF04452 RNA methyltransferase 20 236 1.3E-72 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BD65_1303 997e54e2f39679aa4ea8ea9a182b2f04 243 SUPERFAMILY SSF75217 75 242 2.15E-51 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BD65_1303 997e54e2f39679aa4ea8ea9a182b2f04 243 Gene3D G3DSA:2.40.240.20 1 73 7.7E-23 T 14-10-2018 BD65_1303 997e54e2f39679aa4ea8ea9a182b2f04 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 4.6E-88 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BD65_1303 997e54e2f39679aa4ea8ea9a182b2f04 243 PIRSF PIRSF015601 2 242 4.5E-54 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BD65_1303 997e54e2f39679aa4ea8ea9a182b2f04 243 Gene3D G3DSA:3.40.1280.10 74 243 1.9E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BD65_526 f82630840c1396a3e6f0f7fdd167a580 132 Gene3D G3DSA:3.10.400.10 1 131 2.4E-41 T 14-10-2018 BD65_526 f82630840c1396a3e6f0f7fdd167a580 132 Pfam PF04266 ASCH domain 20 128 1.3E-21 T 14-10-2018 IPR007374 ASCH domain BD65_526 f82630840c1396a3e6f0f7fdd167a580 132 SMART SM01022 15 128 1.5E-35 T 14-10-2018 IPR007374 ASCH domain BD65_526 f82630840c1396a3e6f0f7fdd167a580 132 PIRSF PIRSF021320 1 131 9.2E-42 T 14-10-2018 IPR009326 Protein of unknown function DUF984 BD65_526 f82630840c1396a3e6f0f7fdd167a580 132 SUPERFAMILY SSF88697 4 128 6.21E-44 T 14-10-2018 IPR015947 PUA-like superfamily BD65_3150 13e0df8419de760e4e1a78fb382118bf 294 PIRSF PIRSF006334 14 294 1.2E-106 T 14-10-2018 BD65_3150 13e0df8419de760e4e1a78fb382118bf 294 SUPERFAMILY SSF53927 1 149 1.05E-41 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BD65_3150 13e0df8419de760e4e1a78fb382118bf 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 2.0E-12 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BD65_3150 13e0df8419de760e4e1a78fb382118bf 294 Gene3D G3DSA:3.40.140.10 180 294 6.1E-28 T 14-10-2018 BD65_3150 13e0df8419de760e4e1a78fb382118bf 294 SUPERFAMILY SSF53927 153 291 5.35E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BD65_3150 13e0df8419de760e4e1a78fb382118bf 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 278 2.4E-44 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 BD65_3150 13e0df8419de760e4e1a78fb382118bf 294 Gene3D G3DSA:3.40.140.10 29 179 6.4E-43 T 14-10-2018 BD65_3150 13e0df8419de760e4e1a78fb382118bf 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BD65_3150 13e0df8419de760e4e1a78fb382118bf 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 284 4.8E-85 T 14-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 BD65_3150 13e0df8419de760e4e1a78fb382118bf 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.334 T 14-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 BD65_1781 c832dfa91f9b986bc6016a82588114a9 429 SMART SM00487 28 234 2.7E-51 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_1781 c832dfa91f9b986bc6016a82588114a9 429 Gene3D G3DSA:3.40.50.300 227 393 1.6E-44 T 14-10-2018 BD65_1781 c832dfa91f9b986bc6016a82588114a9 429 SMART SM00490 270 351 4.5E-30 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1781 c832dfa91f9b986bc6016a82588114a9 429 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.455 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 BD65_1781 c832dfa91f9b986bc6016a82588114a9 429 Gene3D G3DSA:3.40.50.300 2 222 3.4E-67 T 14-10-2018 BD65_1781 c832dfa91f9b986bc6016a82588114a9 429 Pfam PF00270 DEAD/DEAH box helicase 33 206 3.3E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_1781 c832dfa91f9b986bc6016a82588114a9 429 Pfam PF00271 Helicase conserved C-terminal domain 243 351 2.5E-28 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1781 c832dfa91f9b986bc6016a82588114a9 429 SUPERFAMILY SSF52540 84 363 9.43E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1781 c832dfa91f9b986bc6016a82588114a9 429 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BD65_2813 64f34520611e455aa96a48c6efeac329 482 Gene3D G3DSA:3.40.50.620 175 396 1.9E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2813 64f34520611e455aa96a48c6efeac329 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 373 1.0E-131 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 BD65_2813 64f34520611e455aa96a48c6efeac329 482 Pfam PF02926 THUMP domain 29 161 6.7E-22 T 14-10-2018 IPR004114 THUMP domain GO:0003723 BD65_2813 64f34520611e455aa96a48c6efeac329 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 2.1E-79 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 BD65_2813 64f34520611e455aa96a48c6efeac329 482 SUPERFAMILY SSF52821 390 481 6.55E-12 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_2813 64f34520611e455aa96a48c6efeac329 482 SUPERFAMILY SSF52402 174 372 4.41E-42 T 14-10-2018 BD65_2813 64f34520611e455aa96a48c6efeac329 482 SMART SM00981 75 165 4.4E-21 T 14-10-2018 IPR004114 THUMP domain GO:0003723 BD65_2813 64f34520611e455aa96a48c6efeac329 482 SUPERFAMILY SSF143437 1 173 8.55E-47 T 14-10-2018 BD65_2813 64f34520611e455aa96a48c6efeac329 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 9.6E-42 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 BD65_2813 64f34520611e455aa96a48c6efeac329 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 227.826 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 BD65_2813 64f34520611e455aa96a48c6efeac329 482 Gene3D G3DSA:3.40.250.10 397 482 1.2E-8 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_2813 64f34520611e455aa96a48c6efeac329 482 Gene3D G3DSA:3.30.2130.30 1 174 3.9E-34 T 14-10-2018 BD65_2511 d1b44a6d6028b6f018518aa609f884a0 273 SUPERFAMILY SSF55347 131 240 6.98E-37 T 14-10-2018 BD65_2511 d1b44a6d6028b6f018518aa609f884a0 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 34.8 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_2511 d1b44a6d6028b6f018518aa609f884a0 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 3.2E-42 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_2511 d1b44a6d6028b6f018518aa609f884a0 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 1.1E-41 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_2511 d1b44a6d6028b6f018518aa609f884a0 273 Gene3D G3DSA:3.30.360.10 131 238 2.4E-102 T 14-10-2018 BD65_2511 d1b44a6d6028b6f018518aa609f884a0 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_2511 d1b44a6d6028b6f018518aa609f884a0 273 PIRSF PIRSF000161 4 272 6.3E-89 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_2511 d1b44a6d6028b6f018518aa609f884a0 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 269 1.7E-106 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_2511 d1b44a6d6028b6f018518aa609f884a0 273 Gene3D G3DSA:3.40.50.720 7 268 2.4E-102 T 14-10-2018 BD65_2511 d1b44a6d6028b6f018518aa609f884a0 273 SUPERFAMILY SSF51735 4 272 1.14E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2213 37dd206a14d77ee1c07f68e9ddf79c19 110 Gene3D G3DSA:3.90.470.10 1 110 2.4E-46 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BD65_2213 37dd206a14d77ee1c07f68e9ddf79c19 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.2E-50 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2213 37dd206a14d77ee1c07f68e9ddf79c19 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 9.7E-38 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BD65_2213 37dd206a14d77ee1c07f68e9ddf79c19 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2213 37dd206a14d77ee1c07f68e9ddf79c19 110 SUPERFAMILY SSF54843 1 109 2.35E-42 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BD65_2213 37dd206a14d77ee1c07f68e9ddf79c19 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.77 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_3034 562797343f35d2175508f8cfd460696d 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BD65_3034 562797343f35d2175508f8cfd460696d 290 Pfam PF02629 CoA binding domain 6 99 9.0E-33 T 14-10-2018 IPR003781 CoA-binding GO:0048037 BD65_3034 562797343f35d2175508f8cfd460696d 290 Gene3D G3DSA:3.40.50.261 124 289 2.1E-75 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_3034 562797343f35d2175508f8cfd460696d 290 Pfam PF00549 CoA-ligase 151 271 3.8E-20 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_3034 562797343f35d2175508f8cfd460696d 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.093 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_3034 562797343f35d2175508f8cfd460696d 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 9.3E-41 T 14-10-2018 BD65_3034 562797343f35d2175508f8cfd460696d 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 9.3E-41 T 14-10-2018 BD65_3034 562797343f35d2175508f8cfd460696d 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 9.3E-41 T 14-10-2018 BD65_3034 562797343f35d2175508f8cfd460696d 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 9.3E-41 T 14-10-2018 BD65_3034 562797343f35d2175508f8cfd460696d 290 Gene3D G3DSA:3.40.50.720 1 123 1.7E-52 T 14-10-2018 BD65_3034 562797343f35d2175508f8cfd460696d 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 2.6E-145 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_3034 562797343f35d2175508f8cfd460696d 290 SUPERFAMILY SSF51735 1 122 2.67E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_3034 562797343f35d2175508f8cfd460696d 290 SUPERFAMILY SSF52210 123 287 7.33E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_3034 562797343f35d2175508f8cfd460696d 290 SMART SM00881 4 100 1.6E-38 T 14-10-2018 IPR003781 CoA-binding GO:0048037 BD65_3034 562797343f35d2175508f8cfd460696d 290 PIRSF PIRSF001553 1 290 7.2E-134 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_3034 562797343f35d2175508f8cfd460696d 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BD65_3070 21f60fb8ab32272a86d92d6bc4a22eb4 345 Gene3D G3DSA:3.20.20.70 4 315 3.9E-133 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_3070 21f60fb8ab32272a86d92d6bc4a22eb4 345 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.078 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BD65_3070 21f60fb8ab32272a86d92d6bc4a22eb4 345 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 9.9E-20 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BD65_3070 21f60fb8ab32272a86d92d6bc4a22eb4 345 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 9.7E-125 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BD65_3070 21f60fb8ab32272a86d92d6bc4a22eb4 345 SMART SM00876 220 312 1.2E-48 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BD65_3070 21f60fb8ab32272a86d92d6bc4a22eb4 345 PIRSF PIRSF001619 1 319 8.3E-139 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BD65_3070 21f60fb8ab32272a86d92d6bc4a22eb4 345 SMART SM00729 43 255 5.1E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BD65_3070 21f60fb8ab32272a86d92d6bc4a22eb4 345 SUPERFAMILY SSF102114 5 313 1.7E-93 T 14-10-2018 BD65_3070 21f60fb8ab32272a86d92d6bc4a22eb4 345 Pfam PF04055 Radical SAM superfamily 50 202 2.9E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_1639 4a6bc906ad3fd3f72643a2c9cb042ddf 354 SUPERFAMILY SSF51726 2 352 5.93E-122 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BD65_1639 4a6bc906ad3fd3f72643a2c9cb042ddf 354 Gene3D G3DSA:3.20.20.210 1 354 3.0E-163 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BD65_1639 4a6bc906ad3fd3f72643a2c9cb042ddf 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 4.2E-137 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BD65_1639 4a6bc906ad3fd3f72643a2c9cb042ddf 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BD65_1639 4a6bc906ad3fd3f72643a2c9cb042ddf 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BD65_1639 4a6bc906ad3fd3f72643a2c9cb042ddf 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.623 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BD65_1639 4a6bc906ad3fd3f72643a2c9cb042ddf 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 2.5E-141 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 Pfam PF00989 PAS fold 221 322 1.9E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 SMART SM00387 429 537 1.5E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 Pfam PF17203 Single cache domain 3 47 178 4.0E-21 T 14-10-2018 IPR033463 Single cache domain 3 BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 SUPERFAMILY SSF103190 46 177 2.88E-35 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 Gene3D G3DSA:3.30.565.10 386 534 2.7E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 SUPERFAMILY SSF55874 400 534 1.96E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 SUPERFAMILY SSF55785 219 321 3.24E-6 T 14-10-2018 IPR035965 PAS domain superfamily BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 Gene3D G3DSA:3.30.450.20 40 180 6.4E-41 T 14-10-2018 BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 Gene3D G3DSA:3.30.450.20 208 324 1.1E-24 T 14-10-2018 BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 482 1.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 1.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 1.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 331 383 1.6E-11 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain BD65_99 b47c42dad638617d963b9f8f2f2cf2ab 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 433 535 1.8E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2980 822c465392890449d5fcd830484f9e5e 292 SUPERFAMILY SSF54631 66 202 4.42E-32 T 14-10-2018 BD65_2980 822c465392890449d5fcd830484f9e5e 292 Gene3D G3DSA:3.30.465.10 198 292 8.0E-34 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BD65_2980 822c465392890449d5fcd830484f9e5e 292 Pfam PF00571 CBS domain 69 123 6.9E-8 T 14-10-2018 IPR000644 CBS domain BD65_2980 822c465392890449d5fcd830484f9e5e 292 Pfam PF00571 CBS domain 143 189 9.3E-5 T 14-10-2018 IPR000644 CBS domain BD65_2980 822c465392890449d5fcd830484f9e5e 292 SMART SM01091 205 283 2.8E-28 T 14-10-2018 IPR005170 Transporter-associated domain BD65_2980 822c465392890449d5fcd830484f9e5e 292 Pfam PF03471 Transporter associated domain 206 281 3.2E-21 T 14-10-2018 IPR005170 Transporter-associated domain BD65_2980 822c465392890449d5fcd830484f9e5e 292 SMART SM00116 141 189 2.5 T 14-10-2018 IPR000644 CBS domain BD65_2980 822c465392890449d5fcd830484f9e5e 292 SMART SM00116 78 127 2.9 T 14-10-2018 IPR000644 CBS domain BD65_2980 822c465392890449d5fcd830484f9e5e 292 SUPERFAMILY SSF56176 203 289 2.48E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BD65_2980 822c465392890449d5fcd830484f9e5e 292 Gene3D G3DSA:3.10.580.10 51 197 5.4E-56 T 14-10-2018 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 SUPERFAMILY SSF53748 4 383 7.66E-143 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 Pfam PF00162 Phosphoglycerate kinase 6 373 3.3E-137 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.926 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 Gene3D G3DSA:3.40.50.1260 165 373 4.4E-153 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 Gene3D G3DSA:3.40.50.1260 10 378 4.4E-153 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1291 663ae35461e8c98af7eb48e62e2d051a 387 PIRSF PIRSF000724 1 387 6.1E-132 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_2143 c4549875f12caadbd6b16a743806d61f 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2143 c4549875f12caadbd6b16a743806d61f 239 SUPERFAMILY SSF52172 3 126 1.17E-41 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2143 c4549875f12caadbd6b16a743806d61f 239 SUPERFAMILY SSF46894 132 234 2.3E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2143 c4549875f12caadbd6b16a743806d61f 239 SMART SM00862 156 232 1.7E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2143 c4549875f12caadbd6b16a743806d61f 239 Gene3D G3DSA:3.40.50.2300 1 126 3.2E-40 T 14-10-2018 BD65_2143 c4549875f12caadbd6b16a743806d61f 239 SMART SM00448 5 116 1.2E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2143 c4549875f12caadbd6b16a743806d61f 239 Gene3D G3DSA:1.10.10.10 130 239 1.5E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2143 c4549875f12caadbd6b16a743806d61f 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_980 cadc86f233f21102f5de92065d90f36a 224 Gene3D G3DSA:3.30.1380.10 4 193 6.6E-34 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BD65_980 cadc86f233f21102f5de92065d90f36a 224 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 21 177 8.8E-38 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 BD65_980 cadc86f233f21102f5de92065d90f36a 224 SUPERFAMILY SSF55166 16 178 2.79E-20 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BD65_2611 be68b98cf34f0442839d75d608993af8 260 Gene3D G3DSA:3.40.50.1980 7 126 3.4E-36 T 14-10-2018 BD65_2611 be68b98cf34f0442839d75d608993af8 260 Gene3D G3DSA:3.40.50.1980 129 252 6.9E-35 T 14-10-2018 BD65_2611 be68b98cf34f0442839d75d608993af8 260 Pfam PF01497 Periplasmic binding protein 11 210 3.6E-25 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain BD65_2611 be68b98cf34f0442839d75d608993af8 260 SUPERFAMILY SSF53807 8 249 2.47E-55 T 14-10-2018 BD65_2611 be68b98cf34f0442839d75d608993af8 260 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 253 48.018 T 14-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 BD65_3165 635db87de0ec0ba4ab55c3c8e22ea293 298 SUPERFAMILY SSF53448 2 277 8.56E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_3165 635db87de0ec0ba4ab55c3c8e22ea293 298 Gene3D G3DSA:3.90.550.10 3 298 5.5E-86 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_3165 635db87de0ec0ba4ab55c3c8e22ea293 298 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 6 273 1.1E-114 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 BD65_3165 635db87de0ec0ba4ab55c3c8e22ea293 298 Pfam PF00483 Nucleotidyl transferase 6 273 3.8E-25 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BD65_946 952d54fa8e9c4416c29288c2e5348abd 85 SUPERFAMILY SSF55594 1 82 9.42E-27 T 14-10-2018 IPR035895 HPr-like superfamily BD65_946 952d54fa8e9c4416c29288c2e5348abd 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.1E-30 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_946 952d54fa8e9c4416c29288c2e5348abd 85 Gene3D G3DSA:3.30.1340.10 1 85 5.1E-35 T 14-10-2018 IPR035895 HPr-like superfamily BD65_946 952d54fa8e9c4416c29288c2e5348abd 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.9E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_946 952d54fa8e9c4416c29288c2e5348abd 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.9E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_946 952d54fa8e9c4416c29288c2e5348abd 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.9E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_946 952d54fa8e9c4416c29288c2e5348abd 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BD65_946 952d54fa8e9c4416c29288c2e5348abd 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BD65_946 952d54fa8e9c4416c29288c2e5348abd 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 5.5E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_2055 5236a68e787fd91dc99920a948474cd4 461 SUPERFAMILY SSF53383 73 377 3.55E-44 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_2055 5236a68e787fd91dc99920a948474cd4 461 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 454 3.5E-184 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 BD65_2055 5236a68e787fd91dc99920a948474cd4 461 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 461 242.983 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 BD65_2055 5236a68e787fd91dc99920a948474cd4 461 Gene3D G3DSA:3.40.640.10 94 358 1.8E-157 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_2055 5236a68e787fd91dc99920a948474cd4 461 Gene3D G3DSA:3.90.1150.110 11 453 1.8E-157 T 14-10-2018 BD65_2055 5236a68e787fd91dc99920a948474cd4 461 Pfam PF03841 L-seryl-tRNA selenium transferase 82 449 2.1E-169 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 BD65_2055 5236a68e787fd91dc99920a948474cd4 461 Pfam PF12390 Selenocysteine synthase N terminal 9 48 3.5E-9 T 14-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 SUPERFAMILY SSF143243 24 228 4.58E-60 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 598 1.2E-174 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 598 41.858 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 184 25.004 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 SUPERFAMILY SSF56762 224 598 1.7E-120 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 176 3.1E-42 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 159 6.0E-26 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 Gene3D G3DSA:3.30.460.80 6 156 1.2E-35 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 Gene3D G3DSA:1.10.645.20 213 598 8.6E-143 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 598 72.229 T 14-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 1.4E-45 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_845 381648f9dd63b1de5a37475a31faeae1 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 598 6.2E-104 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_809 eeb178f140432e1451580666502cd4f2 384 SUPERFAMILY SSF103473 20 377 1.03E-31 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_809 eeb178f140432e1451580666502cd4f2 384 Gene3D G3DSA:1.20.1250.20 15 189 1.7E-11 T 14-10-2018 BD65_809 eeb178f140432e1451580666502cd4f2 384 Gene3D G3DSA:1.20.1250.20 202 382 2.6E-19 T 14-10-2018 BD65_809 eeb178f140432e1451580666502cd4f2 384 Pfam PF07690 Major Facilitator Superfamily 22 322 1.6E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_289 36d112f92090f7ec24ba407c16842445 321 SUPERFAMILY SSF55174 5 98 1.47E-12 T 14-10-2018 BD65_289 36d112f92090f7ec24ba407c16842445 321 Gene3D G3DSA:3.10.290.10 1 61 8.4E-23 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BD65_289 36d112f92090f7ec24ba407c16842445 321 Pfam PF00849 RNA pseudouridylate synthase 69 199 5.5E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_289 36d112f92090f7ec24ba407c16842445 321 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BD65_289 36d112f92090f7ec24ba407c16842445 321 SMART SM00363 3 74 2.0E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_289 36d112f92090f7ec24ba407c16842445 321 Pfam PF01479 S4 domain 4 44 1.6E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_289 36d112f92090f7ec24ba407c16842445 321 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 2.7E-62 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BD65_289 36d112f92090f7ec24ba407c16842445 321 Gene3D G3DSA:3.30.2350.10 63 251 5.3E-53 T 14-10-2018 BD65_289 36d112f92090f7ec24ba407c16842445 321 SUPERFAMILY SSF55120 69 233 1.5E-44 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_1060 6e0772752dcf814474c164456ff55ecd 384 Gene3D G3DSA:3.20.20.10 99 251 1.6E-150 T 14-10-2018 IPR029066 PLP-binding barrel BD65_1060 6e0772752dcf814474c164456ff55ecd 384 Pfam PF01168 Alanine racemase, N-terminal domain 33 264 4.5E-18 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1060 6e0772752dcf814474c164456ff55ecd 384 SUPERFAMILY SSF51419 35 267 3.55E-24 T 14-10-2018 IPR029066 PLP-binding barrel BD65_1060 6e0772752dcf814474c164456ff55ecd 384 Gene3D G3DSA:2.40.37.30 8 380 1.6E-150 T 14-10-2018 BD65_2176 9375566f4db22a03363c9f6b2c65e965 406 Gene3D G3DSA:3.90.1150.10 29 392 2.7E-155 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_2176 9375566f4db22a03363c9f6b2c65e965 406 SUPERFAMILY SSF53383 18 399 7.4E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_2176 9375566f4db22a03363c9f6b2c65e965 406 PIRSF PIRSF000521 26 155 1.8E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_2176 9375566f4db22a03363c9f6b2c65e965 406 PIRSF PIRSF000521 173 402 2.6E-35 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_2176 9375566f4db22a03363c9f6b2c65e965 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 71.21 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BD65_2176 9375566f4db22a03363c9f6b2c65e965 406 Pfam PF00202 Aminotransferase class-III 24 399 2.7E-136 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_2176 9375566f4db22a03363c9f6b2c65e965 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 7.7E-153 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BD65_2176 9375566f4db22a03363c9f6b2c65e965 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_2176 9375566f4db22a03363c9f6b2c65e965 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 2.5E-206 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 BD65_2176 9375566f4db22a03363c9f6b2c65e965 406 Gene3D G3DSA:3.40.640.10 59 304 2.7E-155 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_673 0c9f7272c8c1c1a8a8a8108c5fdf27ef 391 Gene3D G3DSA:1.10.287.70 134 229 1.6E-14 T 14-10-2018 BD65_673 0c9f7272c8c1c1a8a8a8108c5fdf27ef 391 SUPERFAMILY SSF81324 121 262 1.31E-17 T 14-10-2018 BD65_673 0c9f7272c8c1c1a8a8a8108c5fdf27ef 391 Pfam PF07885 Ion channel 147 218 2.5E-13 T 14-10-2018 IPR013099 Potassium channel domain BD65_673 0c9f7272c8c1c1a8a8a8108c5fdf27ef 391 Pfam PF02254 TrkA-N domain 243 356 2.4E-16 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BD65_673 0c9f7272c8c1c1a8a8a8108c5fdf27ef 391 SUPERFAMILY SSF51735 240 375 6.06E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_673 0c9f7272c8c1c1a8a8a8108c5fdf27ef 391 Gene3D G3DSA:3.40.50.720 238 385 1.6E-27 T 14-10-2018 BD65_504 fbfc4662d06bb9345ef72016652bb2be 210 SUPERFAMILY SSF53955 43 207 7.17E-30 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_504 fbfc4662d06bb9345ef72016652bb2be 210 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 65 93 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BD65_504 fbfc4662d06bb9345ef72016652bb2be 210 Pfam PF01464 Transglycosylase SLT domain 47 170 1.1E-27 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 BD65_504 fbfc4662d06bb9345ef72016652bb2be 210 Gene3D G3DSA:1.10.530.10 33 208 2.6E-44 T 14-10-2018 BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 SMART SM00387 345 455 9.3E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 SMART SM00304 184 237 2.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 Gene3D G3DSA:3.30.450.210 27 147 8.5E-10 T 14-10-2018 IPR038515 CpxA, periplasmic domain superfamily BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 83 153 1.3E-10 T 14-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 Pfam PF00672 HAMP domain 184 234 8.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 SUPERFAMILY SSF55874 289 455 1.01E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 SUPERFAMILY SSF47384 224 299 2.35E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 Gene3D G3DSA:3.30.565.10 304 454 2.1E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 3.6E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 Gene3D G3DSA:1.10.287.130 188 302 9.5E-38 T 14-10-2018 BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 454 4.2E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 SMART SM00388 238 300 3.8E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1901 f8e57cf72dcd14c2646046469d59e3c3 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_471 994588d6cf8cdeda7e579e00a2f441e9 228 ProSitePatterns PS00211 ABC transporters family signature. 104 118 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_471 994588d6cf8cdeda7e579e00a2f441e9 228 Pfam PF00005 ABC transporter 2 138 4.2E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_471 994588d6cf8cdeda7e579e00a2f441e9 228 SUPERFAMILY SSF52540 1 199 4.55E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_471 994588d6cf8cdeda7e579e00a2f441e9 228 Gene3D G3DSA:3.40.50.300 1 228 1.1E-64 T 14-10-2018 BD65_471 994588d6cf8cdeda7e579e00a2f441e9 228 SMART SM00382 1 187 6.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1419 71166aac7678efeabc53262f09615d6b 1037 Gene3D G3DSA:3.90.640.50 55 127 5.1E-94 T 14-10-2018 BD65_1419 71166aac7678efeabc53262f09615d6b 1037 Gene3D G3DSA:3.40.50.300 461 730 1.0E-109 T 14-10-2018 BD65_1419 71166aac7678efeabc53262f09615d6b 1037 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 727 1030 8.1E-68 T 14-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal BD65_1419 71166aac7678efeabc53262f09615d6b 1037 Gene3D G3DSA:1.20.58.2040 731 884 5.3E-79 T 14-10-2018 BD65_1419 71166aac7678efeabc53262f09615d6b 1037 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 38 724 4.4E-216 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 BD65_1419 71166aac7678efeabc53262f09615d6b 1037 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 29 218 7.0E-51 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 BD65_1419 71166aac7678efeabc53262f09615d6b 1037 ProDom PD047574 TYPE I RESTRICTION HYDROLASE DEOXYRIBONUCLEASE SITE-SPECIFIC HSDR ENZYME SYSTEM ENDONUCLEASE 836 858 4.0E-5 T 14-10-2018 BD65_1419 71166aac7678efeabc53262f09615d6b 1037 Gene3D G3DSA:3.40.50.300 270 460 2.0E-74 T 14-10-2018 BD65_1419 71166aac7678efeabc53262f09615d6b 1037 SUPERFAMILY SSF52540 228 441 2.66E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1419 71166aac7678efeabc53262f09615d6b 1037 SMART SM00487 267 477 9.8E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_1419 71166aac7678efeabc53262f09615d6b 1037 Gene3D G3DSA:3.90.1570.50 29 263 5.1E-94 T 14-10-2018 BD65_1419 71166aac7678efeabc53262f09615d6b 1037 Pfam PF04851 Type III restriction enzyme, res subunit 270 438 1.4E-35 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BD65_1419 71166aac7678efeabc53262f09615d6b 1037 Gene3D G3DSA:1.10.10.2110 794 835 5.3E-79 T 14-10-2018 BD65_968 328c07f398174976cba67f59b5f6c504 199 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 10 193 2.0E-104 T 14-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 BD65_968 328c07f398174976cba67f59b5f6c504 199 Gene3D G3DSA:1.10.3820.10 18 195 1.2E-39 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily BD65_968 328c07f398174976cba67f59b5f6c504 199 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 21 192 9.2E-79 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal BD65_968 328c07f398174976cba67f59b5f6c504 199 SUPERFAMILY SSF48695 16 193 1.04E-64 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BD65_968 328c07f398174976cba67f59b5f6c504 199 PIRSF PIRSF000013 1 199 2.2E-107 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 SUPERFAMILY SSF51735 8 182 4.82E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 6.9E-50 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 PIRSF PIRSF000114 1 336 7.1E-101 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 Gene3D G3DSA:3.40.50.720 2 191 1.4E-54 T 14-10-2018 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 8.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 8.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 8.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 8.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 8.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 8.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.028 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 8.2E-53 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 SUPERFAMILY SSF48179 184 335 5.5E-58 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BD65_1904 9ee418a0954db8ce157157e40a0b8851 339 Gene3D G3DSA:1.10.1040.10 193 338 3.2E-53 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BD65_333 aceb59b17f08a1be90af7797166d4f44 404 Gene3D G3DSA:1.10.10.10 1 81 4.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_333 aceb59b17f08a1be90af7797166d4f44 404 Gene3D G3DSA:3.30.420.40 208 376 3.4E-89 T 14-10-2018 BD65_333 aceb59b17f08a1be90af7797166d4f44 404 SUPERFAMILY SSF53067 86 393 1.15E-41 T 14-10-2018 BD65_333 aceb59b17f08a1be90af7797166d4f44 404 SUPERFAMILY SSF46785 11 76 2.73E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_333 aceb59b17f08a1be90af7797166d4f44 404 Pfam PF00480 ROK family 97 388 1.4E-49 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_333 aceb59b17f08a1be90af7797166d4f44 404 Gene3D G3DSA:3.30.420.40 91 381 3.4E-89 T 14-10-2018 BD65_1545 56a8097739b195bf261be927eb238314 197 Pfam PF02545 Maf-like protein 4 184 2.3E-57 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BD65_1545 56a8097739b195bf261be927eb238314 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 8.4E-61 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BD65_1545 56a8097739b195bf261be927eb238314 197 SUPERFAMILY SSF52972 2 184 8.5E-60 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BD65_1545 56a8097739b195bf261be927eb238314 197 Gene3D G3DSA:3.90.950.10 2 190 5.9E-72 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BD65_1545 56a8097739b195bf261be927eb238314 197 PIRSF PIRSF006305 1 190 2.3E-50 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BD65_1545 56a8097739b195bf261be927eb238314 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 30.825 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 Gene3D G3DSA:3.40.50.1100 25 327 2.5E-128 T 14-10-2018 BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 SUPERFAMILY SSF55021 420 512 3.89E-25 T 14-10-2018 BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 SUPERFAMILY SSF55021 336 423 2.2E-27 T 14-10-2018 BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 SUPERFAMILY SSF53686 14 365 5.63E-99 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 8.6E-259 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 Gene3D G3DSA:3.40.50.1100 61 157 2.5E-128 T 14-10-2018 BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 Gene3D G3DSA:3.40.1020.10 338 514 1.1E-72 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 1.9E-28 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 7.9E-26 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BD65_1788 d4f62781cdd4aff0304b388b3ea280db 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 316 3.2E-76 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BD65_1913 d798944956808cf6ffad1f9a05ce149b 310 Gene3D G3DSA:3.40.50.720 3 302 3.1E-120 T 14-10-2018 BD65_1913 d798944956808cf6ffad1f9a05ce149b 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 49.255 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 BD65_1913 d798944956808cf6ffad1f9a05ce149b 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 6.6E-136 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 BD65_1913 d798944956808cf6ffad1f9a05ce149b 310 Gene3D G3DSA:3.90.25.10 168 290 3.1E-120 T 14-10-2018 BD65_1913 d798944956808cf6ffad1f9a05ce149b 310 SUPERFAMILY SSF51735 1 306 7.25E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1913 d798944956808cf6ffad1f9a05ce149b 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 2.9E-46 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 2.3E-64 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 SUPERFAMILY SSF56784 1 158 2.07E-37 T 14-10-2018 IPR036412 HAD-like superfamily BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 4.9E-44 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 SUPERFAMILY SSF54211 252 342 2.28E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 50.831 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 5.1E-77 T 14-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 36.381 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 148 7.1E-24 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 Gene3D G3DSA:3.40.50.1000 1 162 6.5E-43 T 14-10-2018 IPR023214 HAD superfamily BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 Gene3D G3DSA:3.30.230.40 255 355 1.7E-35 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 Gene3D G3DSA:3.30.230.40 163 254 4.0E-35 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 SUPERFAMILY SSF54211 167 251 1.39E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BD65_3172 ca4334c51ad1038bdd661a2d9952691b 355 Pfam PF13242 HAD-hyrolase-like 103 146 1.1E-4 T 14-10-2018 BD65_2953 da124541039973ad8459254cdc26fe64 159 SUPERFAMILY SSF50249 2 62 1.22E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2953 da124541039973ad8459254cdc26fe64 159 Gene3D G3DSA:2.40.50.140 1 68 6.6E-18 T 14-10-2018 BD65_2953 da124541039973ad8459254cdc26fe64 159 Pfam PF00313 'Cold-shock' DNA-binding domain 1 61 1.9E-9 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 SMART SM00116 96 144 4.2E-7 T 14-10-2018 IPR000644 CBS domain BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 SMART SM00116 158 206 4.0E-7 T 14-10-2018 IPR000644 CBS domain BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 SMART SM01240 7 473 0.0 T 14-10-2018 BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 Pfam PF00571 CBS domain 95 140 5.2E-6 T 14-10-2018 IPR000644 CBS domain BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 Pfam PF00571 CBS domain 149 202 4.4E-4 T 14-10-2018 IPR000644 CBS domain BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 6.3E-194 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 2.4E-159 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 Gene3D G3DSA:3.20.20.70 1 486 1.4E-203 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 SUPERFAMILY SSF54631 95 203 3.92E-23 T 14-10-2018 BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 SUPERFAMILY SSF51412 2 477 4.58E-123 T 14-10-2018 BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.256 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BD65_1025 63f4c9f876829a2bdab31203fbd5fd8e 487 PIRSF PIRSF000130 1 487 9.6E-194 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BD65_25 a213b4ea6062cd365b16700b33dab8be 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BD65_25 a213b4ea6062cd365b16700b33dab8be 92 Pfam PF00708 Acylphosphatase 8 90 1.3E-23 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BD65_25 a213b4ea6062cd365b16700b33dab8be 92 SUPERFAMILY SSF54975 2 92 5.01E-28 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BD65_25 a213b4ea6062cd365b16700b33dab8be 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 27.987 T 14-10-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BD65_25 a213b4ea6062cd365b16700b33dab8be 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BD65_25 a213b4ea6062cd365b16700b33dab8be 92 Gene3D G3DSA:3.30.70.100 1 91 1.0E-28 T 14-10-2018 BD65_1703 5c74793eeea04653042973e5b8991b57 439 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 BD65_1703 5c74793eeea04653042973e5b8991b57 439 Gene3D G3DSA:3.40.190.10 147 426 2.5E-164 T 14-10-2018 BD65_1703 5c74793eeea04653042973e5b8991b57 439 Gene3D G3DSA:3.40.190.10 31 385 2.5E-164 T 14-10-2018 BD65_1703 5c74793eeea04653042973e5b8991b57 439 SUPERFAMILY SSF53850 27 427 2.03E-73 T 14-10-2018 BD65_1703 5c74793eeea04653042973e5b8991b57 439 Pfam PF13416 Bacterial extracellular solute-binding protein 46 369 2.2E-39 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BD65_308 34328c163cbf22f751dffc8ff95e4050 221 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BD65_308 34328c163cbf22f751dffc8ff95e4050 221 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 213 1.5E-80 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BD65_308 34328c163cbf22f751dffc8ff95e4050 221 Gene3D G3DSA:3.20.20.70 1 220 5.2E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_308 34328c163cbf22f751dffc8ff95e4050 221 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 201 3.7E-42 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BD65_308 34328c163cbf22f751dffc8ff95e4050 221 SUPERFAMILY SSF51569 1 216 3.35E-62 T 14-10-2018 BD65_308 34328c163cbf22f751dffc8ff95e4050 221 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BD65_3168 56a730c974687fd43e4190b58a4efdff 204 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 1.0E-25 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BD65_3168 56a730c974687fd43e4190b58a4efdff 204 SUPERFAMILY SSF101386 114 203 8.07E-24 T 14-10-2018 BD65_3168 56a730c974687fd43e4190b58a4efdff 204 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 197 1.6E-30 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BD65_3168 56a730c974687fd43e4190b58a4efdff 204 SUPERFAMILY SSF141734 6 121 1.18E-45 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BD65_3168 56a730c974687fd43e4190b58a4efdff 204 Gene3D G3DSA:3.10.20.400 3 97 2.8E-34 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BD65_3168 56a730c974687fd43e4190b58a4efdff 204 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.579 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 BD65_3168 56a730c974687fd43e4190b58a4efdff 204 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 201 1.1E-16 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 BD65_3168 56a730c974687fd43e4190b58a4efdff 204 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 4.2E-31 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BD65_3168 56a730c974687fd43e4190b58a4efdff 204 Gene3D G3DSA:1.10.287.1080 112 204 4.4E-28 T 14-10-2018 BD65_3168 56a730c974687fd43e4190b58a4efdff 204 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.56 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BD65_1640 c78e10ba1a583682e65cec492a19dc25 258 Gene3D G3DSA:3.90.79.10 126 257 9.4E-40 T 14-10-2018 BD65_1640 c78e10ba1a583682e65cec492a19dc25 258 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 1.0E-8 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 BD65_1640 c78e10ba1a583682e65cec492a19dc25 258 Gene3D G3DSA:3.90.79.20 2 125 5.0E-46 T 14-10-2018 BD65_1640 c78e10ba1a583682e65cec492a19dc25 258 Pfam PF00293 NUDIX domain 131 234 1.0E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_1640 c78e10ba1a583682e65cec492a19dc25 258 SUPERFAMILY SSF55811 79 241 8.39E-40 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_1640 c78e10ba1a583682e65cec492a19dc25 258 SUPERFAMILY SSF55811 2 96 4.87E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_1640 c78e10ba1a583682e65cec492a19dc25 258 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 45.01 T 14-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 BD65_1640 c78e10ba1a583682e65cec492a19dc25 258 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BD65_2755 ea461dda246c21037f56284b507e9153 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.618 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 BD65_2755 ea461dda246c21037f56284b507e9153 193 Gene3D G3DSA:3.40.50.10490 1 192 4.3E-72 T 14-10-2018 BD65_2755 ea461dda246c21037f56284b507e9153 193 Pfam PF13580 SIS domain 24 146 6.1E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_2755 ea461dda246c21037f56284b507e9153 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.5E-84 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 BD65_2755 ea461dda246c21037f56284b507e9153 193 SUPERFAMILY SSF53697 1 189 6.27E-52 T 14-10-2018 BD65_42 acab6d44cfbad66eb8075524b4d87b8b 197 Gene3D G3DSA:1.10.10.10 104 193 3.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_42 acab6d44cfbad66eb8075524b4d87b8b 197 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 186 2.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_42 acab6d44cfbad66eb8075524b4d87b8b 197 SUPERFAMILY SSF46894 127 191 4.08E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_42 acab6d44cfbad66eb8075524b4d87b8b 197 SMART SM00421 133 190 2.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2523 b0e10edbd12176d7897a57a841a50277 330 SUPERFAMILY SSF53659 6 327 4.55E-111 T 14-10-2018 BD65_2523 b0e10edbd12176d7897a57a841a50277 330 Gene3D G3DSA:3.40.718.10 1 330 3.7E-129 T 14-10-2018 BD65_2523 b0e10edbd12176d7897a57a841a50277 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 6.8E-106 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 BD65_2523 b0e10edbd12176d7897a57a841a50277 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 328 36.214 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 BD65_2523 b0e10edbd12176d7897a57a841a50277 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 4.4E-128 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 BD65_1439 07bac766a44a4ffd8db857fea300af26 272 Pfam PF11924 Inverse autotransporter, beta-domain 67 262 5.6E-56 T 14-10-2018 IPR024519 Inverse autotransporter, beta-domain BD65_1439 07bac766a44a4ffd8db857fea300af26 272 Gene3D G3DSA:2.40.160.160 110 269 8.1E-56 T 14-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily BD65_1439 07bac766a44a4ffd8db857fea300af26 272 PRINTS PR01369 Intimin signature 225 244 6.2E-8 T 14-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 BD65_1439 07bac766a44a4ffd8db857fea300af26 272 PRINTS PR01369 Intimin signature 67 82 6.2E-8 T 14-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 BD65_1439 07bac766a44a4ffd8db857fea300af26 272 PRINTS PR01369 Intimin signature 197 212 6.2E-8 T 14-10-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 BD65_1032 5b61ccbcd2486df3169e6c8ad4cdca28 377 Pfam PF04551 GcpE protein 14 354 7.5E-129 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BD65_1032 5b61ccbcd2486df3169e6c8ad4cdca28 377 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 364 34.08 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BD65_1032 5b61ccbcd2486df3169e6c8ad4cdca28 377 Gene3D G3DSA:3.20.20.20 1 261 1.6E-103 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1032 5b61ccbcd2486df3169e6c8ad4cdca28 377 SUPERFAMILY SSF51717 16 207 1.41E-10 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1032 5b61ccbcd2486df3169e6c8ad4cdca28 377 SUPERFAMILY SSF56014 266 334 9.16E-11 T 14-10-2018 BD65_1032 5b61ccbcd2486df3169e6c8ad4cdca28 377 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 2.0E-122 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BD65_1032 5b61ccbcd2486df3169e6c8ad4cdca28 377 Gene3D G3DSA:3.30.413.10 262 361 1.5E-21 T 14-10-2018 BD65_1032 5b61ccbcd2486df3169e6c8ad4cdca28 377 PIRSF PIRSF004640 1 364 4.7E-144 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BD65_2504 f5264a0c7ccb897f0d268c0dab2b5d65 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_2504 f5264a0c7ccb897f0d268c0dab2b5d65 296 Gene3D G3DSA:3.40.190.10 169 265 6.1E-8 T 14-10-2018 BD65_2504 f5264a0c7ccb897f0d268c0dab2b5d65 296 SUPERFAMILY SSF46785 2 85 1.39E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2504 f5264a0c7ccb897f0d268c0dab2b5d65 296 Gene3D G3DSA:1.10.10.10 3 93 1.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2504 f5264a0c7ccb897f0d268c0dab2b5d65 296 SUPERFAMILY SSF53850 90 287 1.71E-26 T 14-10-2018 BD65_2504 f5264a0c7ccb897f0d268c0dab2b5d65 296 Gene3D G3DSA:3.40.190.10 97 281 6.1E-8 T 14-10-2018 BD65_2504 f5264a0c7ccb897f0d268c0dab2b5d65 296 Pfam PF03466 LysR substrate binding domain 96 285 1.1E-11 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_840 287fb524c7eb8527c04897cedd5955cc 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_840 287fb524c7eb8527c04897cedd5955cc 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 147 26.819 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_840 287fb524c7eb8527c04897cedd5955cc 180 Gene3D G3DSA:3.30.70.3270 33 176 2.4E-42 T 14-10-2018 BD65_840 287fb524c7eb8527c04897cedd5955cc 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 4.6E-51 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_840 287fb524c7eb8527c04897cedd5955cc 180 SUPERFAMILY SSF54862 33 155 9.21E-29 T 14-10-2018 BD65_840 287fb524c7eb8527c04897cedd5955cc 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.7E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BD65_2131 bfb38ae041a02b63382db7752f620f91 260 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 46.2 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 BD65_2131 bfb38ae041a02b63382db7752f620f91 260 Pfam PF00561 alpha/beta hydrolase fold 16 242 8.6E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BD65_2131 bfb38ae041a02b63382db7752f620f91 260 Gene3D G3DSA:3.40.50.1820 1 253 6.8E-74 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_2131 bfb38ae041a02b63382db7752f620f91 260 SUPERFAMILY SSF53474 3 252 7.03E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_2131 bfb38ae041a02b63382db7752f620f91 260 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 1.7E-103 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 BD65_282 6f06a82a2cf8fbe5cf620972bfb7871b 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 6.3E-189 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BD65_282 6f06a82a2cf8fbe5cf620972bfb7871b 396 SUPERFAMILY SSF53686 4 389 2.88E-142 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BD65_282 6f06a82a2cf8fbe5cf620972bfb7871b 396 Gene3D G3DSA:3.40.50.1100 53 383 6.8E-182 T 14-10-2018 BD65_282 6f06a82a2cf8fbe5cf620972bfb7871b 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BD65_282 6f06a82a2cf8fbe5cf620972bfb7871b 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 1.7E-48 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BD65_282 6f06a82a2cf8fbe5cf620972bfb7871b 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.523 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BD65_282 6f06a82a2cf8fbe5cf620972bfb7871b 396 Gene3D G3DSA:3.40.50.1100 9 204 6.8E-182 T 14-10-2018 BD65_282 6f06a82a2cf8fbe5cf620972bfb7871b 396 PIRSF PIRSF001413 1 396 9.0E-170 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BD65_3240 2225934b99428c69cd3912c19f66e582 345 Pfam PF00710 Asparaginase, N-terminal 25 214 6.6E-60 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 BD65_3240 2225934b99428c69cd3912c19f66e582 345 Gene3D G3DSA:3.40.50.40 232 345 5.4E-41 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 BD65_3240 2225934b99428c69cd3912c19f66e582 345 SUPERFAMILY SSF53774 24 343 2.49E-101 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 BD65_3240 2225934b99428c69cd3912c19f66e582 345 PIRSF PIRSF001220 21 345 1.1E-88 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BD65_3240 2225934b99428c69cd3912c19f66e582 345 SMART SM00870 25 339 4.7E-136 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BD65_3240 2225934b99428c69cd3912c19f66e582 345 PIRSF PIRSF500176 22 345 1.2E-78 T 14-10-2018 BD65_3240 2225934b99428c69cd3912c19f66e582 345 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 BD65_3240 2225934b99428c69cd3912c19f66e582 345 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 BD65_3240 2225934b99428c69cd3912c19f66e582 345 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 6 342 2.7E-149 T 14-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 BD65_3240 2225934b99428c69cd3912c19f66e582 345 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 9.2E-23 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BD65_3240 2225934b99428c69cd3912c19f66e582 345 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 9.2E-23 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BD65_3240 2225934b99428c69cd3912c19f66e582 345 PRINTS PR00139 Asparaginase/glutaminase family signature 279 297 9.2E-23 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BD65_3240 2225934b99428c69cd3912c19f66e582 345 Gene3D G3DSA:3.40.50.1170 23 231 4.7E-82 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 BD65_205 d2767612e158bb17be4c8c60069977f2 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 83 9.0E-35 T 14-10-2018 IPR027354 YcgL domain BD65_205 d2767612e158bb17be4c8c60069977f2 92 SUPERFAMILY SSF160191 1 86 5.89E-38 T 14-10-2018 IPR038068 YcgL-like superfamily BD65_205 d2767612e158bb17be4c8c60069977f2 92 Pfam PF05166 YcgL domain 3 75 2.4E-33 T 14-10-2018 IPR027354 YcgL domain BD65_205 d2767612e158bb17be4c8c60069977f2 92 Gene3D G3DSA:3.10.510.20 1 74 1.8E-31 T 14-10-2018 IPR038068 YcgL-like superfamily BD65_205 d2767612e158bb17be4c8c60069977f2 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.157 T 14-10-2018 IPR027354 YcgL domain BD65_1155 9d87d4c139eeaf2fa38bae1ecb1d8bb4 451 Gene3D G3DSA:3.30.870.10 24 232 1.9E-176 T 14-10-2018 BD65_1155 9d87d4c139eeaf2fa38bae1ecb1d8bb4 451 SUPERFAMILY SSF56024 253 393 6.28E-18 T 14-10-2018 BD65_1155 9d87d4c139eeaf2fa38bae1ecb1d8bb4 451 SMART SM00155 352 379 4.9E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BD65_1155 9d87d4c139eeaf2fa38bae1ecb1d8bb4 451 SMART SM00155 133 159 0.0035 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BD65_1155 9d87d4c139eeaf2fa38bae1ecb1d8bb4 451 SUPERFAMILY SSF56024 10 210 1.73E-27 T 14-10-2018 BD65_1155 9d87d4c139eeaf2fa38bae1ecb1d8bb4 451 PIRSF PIRSF000850 1 451 8.4E-255 T 14-10-2018 BD65_1155 9d87d4c139eeaf2fa38bae1ecb1d8bb4 451 Gene3D G3DSA:3.30.870.10 18 447 1.9E-176 T 14-10-2018 BD65_1155 9d87d4c139eeaf2fa38bae1ecb1d8bb4 451 Pfam PF13091 PLD-like domain 257 404 2.9E-21 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 SUPERFAMILY SSF47170 49 194 1.7E-13 T 14-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 SMART SM00283 289 536 5.5E-90 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 SUPERFAMILY SSF58104 256 537 7.98E-70 T 14-10-2018 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 416 445 1.1E-62 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 339 1.1E-62 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 414 1.1E-62 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 81 96 1.1E-62 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 26 51 1.1E-62 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 464 493 1.1E-62 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 Pfam PF02203 Tar ligand binding domain homologue 23 185 6.7E-28 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 SMART SM00304 236 288 1.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 314 336 - T 14-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 504 1.4E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 Pfam PF00672 HAMP domain 236 283 1.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_722 412170acf87e4d7b664ebb6814c8be6a 574 Gene3D G3DSA:1.10.287.950 236 538 5.2E-90 T 14-10-2018 BD65_1396 55db874414c5e86789506f04f2650379 415 PIRSF PIRSF000813 1 408 1.7E-202 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BD65_1396 55db874414c5e86789506f04f2650379 415 Pfam PF01966 HD domain 229 327 4.8E-13 T 14-10-2018 IPR006674 HD domain BD65_1396 55db874414c5e86789506f04f2650379 415 SUPERFAMILY SSF81301 2 119 8.61E-30 T 14-10-2018 BD65_1396 55db874414c5e86789506f04f2650379 415 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.936 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BD65_1396 55db874414c5e86789506f04f2650379 415 Gene3D G3DSA:1.10.3090.10 122 406 5.7E-46 T 14-10-2018 BD65_1396 55db874414c5e86789506f04f2650379 415 Pfam PF01743 Poly A polymerase head domain 3 122 2.3E-17 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BD65_1396 55db874414c5e86789506f04f2650379 415 SUPERFAMILY SSF81891 120 402 7.85E-58 T 14-10-2018 BD65_1396 55db874414c5e86789506f04f2650379 415 Gene3D G3DSA:3.30.460.10 1 121 3.4E-27 T 14-10-2018 BD65_1396 55db874414c5e86789506f04f2650379 415 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.375 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BD65_1396 55db874414c5e86789506f04f2650379 415 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 2.5E-18 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BD65_1396 55db874414c5e86789506f04f2650379 415 SMART SM00471 224 359 3.2E-5 T 14-10-2018 IPR003607 HD/PDEase domain BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 546 1.8E-49 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 SUPERFAMILY SSF52467 188 362 4.75E-63 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.7E-46 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 Gene3D G3DSA:3.40.50.970 1 178 1.4E-72 T 14-10-2018 BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 Gene3D G3DSA:3.40.50.970 364 562 6.1E-67 T 14-10-2018 BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 570 2.3E-278 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 170 3.5E-60 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 SUPERFAMILY SSF52518 2 179 1.77E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 Gene3D G3DSA:3.40.50.1220 190 360 4.0E-61 T 14-10-2018 BD65_2543 39b52a28ba01fb5114416ffa6e26fc3c 575 SUPERFAMILY SSF52518 368 572 2.86E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_2414 005f8e9204325720fda0f96586007371 238 Pfam PF01863 Protein of unknown function DUF45 26 228 1.1E-60 T 14-10-2018 IPR002725 Protein of unknown function DUF45 BD65_2414 005f8e9204325720fda0f96586007371 238 Gene3D G3DSA:3.30.2010.10 136 232 1.2E-15 T 14-10-2018 BD65_47 885b103fe95bc2b6c72dd8feceb3159f 95 Gene3D G3DSA:3.30.70.100 1 95 1.1E-31 T 14-10-2018 BD65_47 885b103fe95bc2b6c72dd8feceb3159f 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 77 2.7E-18 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BD65_47 885b103fe95bc2b6c72dd8feceb3159f 95 SUPERFAMILY SSF54909 4 94 7.87E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 SUPERFAMILY SSF50156 381 456 7.23E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 455 6.8E-160 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 Gene3D G3DSA:2.40.10.120 39 263 2.0E-86 T 14-10-2018 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 379 445 2.9E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 264 346 9.4E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 PRINTS PR00834 HtrA/DegQ protease family signature 125 145 4.5E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 PRINTS PR00834 HtrA/DegQ protease family signature 104 116 4.5E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 4.5E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 4.5E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 PRINTS PR00834 HtrA/DegQ protease family signature 309 321 4.5E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 PRINTS PR00834 HtrA/DegQ protease family signature 201 218 4.5E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 SMART SM00228 269 351 1.3E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 SMART SM00228 371 449 7.1E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 SUPERFAMILY SSF50494 40 265 4.92E-65 T 14-10-2018 IPR009003 Peptidase S1, PA clan BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 SUPERFAMILY SSF50156 227 352 4.86E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 Pfam PF13365 Trypsin-like peptidase domain 94 230 4.7E-33 T 14-10-2018 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 Gene3D G3DSA:2.30.42.10 368 457 3.1E-26 T 14-10-2018 BD65_1500 4b5a9f464be4f8c17aaadbedc17ba3c2 457 Gene3D G3DSA:2.30.42.10 267 367 4.1E-29 T 14-10-2018 BD65_404 18a1cedf50505da5d9c22b9541bfeb00 119 Pfam PF04024 PspC domain 8 64 2.1E-15 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal BD65_404 18a1cedf50505da5d9c22b9541bfeb00 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 8 119 2.9E-39 T 14-10-2018 IPR014320 Phage shock protein, PspC BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 PIRSF PIRSF036687 1 859 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 4.2E-67 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 9.0E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 SUPERFAMILY SSF74778 2 160 4.71E-68 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 SUPERFAMILY SSF53732 379 860 6.41E-151 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 Gene3D G3DSA:3.30.499.10 402 529 8.2E-152 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 Gene3D G3DSA:3.40.1060.10 385 681 8.2E-152 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 Gene3D G3DSA:1.25.40.310 1 161 5.5E-74 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 Gene3D G3DSA:3.20.19.10 162 361 1.1E-80 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.7E-98 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 Gene3D G3DSA:3.30.499.10 683 865 1.3E-75 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BD65_2584 c690415ccaa46862fd1bef5436a6a2f9 865 SUPERFAMILY SSF52016 163 371 2.56E-71 T 14-10-2018 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 Pfam PF00550 Phosphopantetheine attachment site 221 280 7.2E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 PIRSF PIRSF001111 1 292 2.5E-133 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 Gene3D G3DSA:1.10.1200.10 216 289 1.4E-24 T 14-10-2018 IPR036736 ACP-like superfamily BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 SUPERFAMILY SSF52499 1 208 1.7E-58 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 Gene3D G3DSA:3.40.50.850 1 207 1.2E-71 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 PRINTS PR01398 Isochorismatase signature 2 14 1.1E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 PRINTS PR01398 Isochorismatase signature 186 203 1.1E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 PRINTS PR01398 Isochorismatase signature 80 99 1.1E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 PRINTS PR01398 Isochorismatase signature 112 134 1.1E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 PRINTS PR01398 Isochorismatase signature 168 186 1.1E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 PRINTS PR01398 Isochorismatase signature 63 80 1.1E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 Pfam PF00857 Isochorismatase family 32 200 9.6E-33 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 BD65_1339 4affaa1a01da21955de9bcb9aeefa61f 294 SUPERFAMILY SSF47336 220 288 9.55E-8 T 14-10-2018 IPR036736 ACP-like superfamily BD65_2568 6db82084fef126e333a838aa81d6a5cd 250 Pfam PF07072 Cell division protein 22 228 6.0E-78 T 14-10-2018 IPR009777 Cell division protein ZapD BD65_2568 6db82084fef126e333a838aa81d6a5cd 250 SUPERFAMILY SSF160950 6 250 1.83E-91 T 14-10-2018 IPR036268 ZapD domain superfamily BD65_2568 6db82084fef126e333a838aa81d6a5cd 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 250 32.658 T 14-10-2018 IPR009777 Cell division protein ZapD BD65_2568 6db82084fef126e333a838aa81d6a5cd 250 Gene3D G3DSA:2.60.440.10 9 250 4.6E-84 T 14-10-2018 IPR027462 Z ring-associated protein D, C-terminal BD65_2568 6db82084fef126e333a838aa81d6a5cd 250 Gene3D G3DSA:1.10.3900.10 16 182 4.6E-84 T 14-10-2018 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 SUPERFAMILY SSF52935 351 479 1.18E-38 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 SUPERFAMILY SSF51621 3 345 2.97E-86 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 Gene3D G3DSA:2.40.33.10 74 172 2.3E-151 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 1.2E-129 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 4.7E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 4.7E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 4.7E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.7E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.7E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 4.7E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 4.7E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 3.9E-30 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 1.3E-169 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 Gene3D G3DSA:3.40.1380.20 342 475 2.3E-151 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_190 b1ad1a9f40212902385595625f93c4b1 480 SUPERFAMILY SSF50800 74 168 4.36E-24 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BD65_190 b1ad1a9f40212902385595625f93c4b1 480 Gene3D G3DSA:3.20.20.60 6 341 2.3E-151 T 14-10-2018 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 SUPERFAMILY SSF48108 396 554 5.49E-53 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Gene3D G3DSA:1.10.1030.10 404 522 4.4E-39 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Gene3D G3DSA:3.40.50.1380 937 1073 2.9E-35 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 SUPERFAMILY SSF52440 1 127 4.75E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.153 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 SMART SM01096 424 547 1.4E-73 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 SUPERFAMILY SSF52440 558 676 1.58E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Pfam PF02142 MGS-like domain 957 1041 4.7E-18 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.354 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 SUPERFAMILY SSF56059 674 934 6.72E-104 T 14-10-2018 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 SUPERFAMILY SSF56059 128 401 6.54E-109 T 14-10-2018 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Gene3D G3DSA:3.40.50.20 524 663 5.8E-64 T 14-10-2018 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 5.0E-37 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.6E-76 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Gene3D G3DSA:3.40.50.20 1 116 1.5E-50 T 14-10-2018 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 7.4E-40 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 SUPERFAMILY SSF52335 939 1071 1.31E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 SMART SM00851 956 1042 1.3E-30 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Gene3D G3DSA:3.30.470.20 119 403 2.3E-132 T 14-10-2018 BD65_2513 cd02390e6315a60725c65db25ab3a516 1077 Gene3D G3DSA:3.30.470.20 666 936 1.4E-125 T 14-10-2018 BD65_3032 b5ccac45b935342a39ed2f765291085a 405 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 403 9.3E-82 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BD65_3032 b5ccac45b935342a39ed2f765291085a 405 Gene3D G3DSA:4.10.320.10 103 152 1.3E-22 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BD65_3032 b5ccac45b935342a39ed2f765291085a 405 Gene3D G3DSA:2.40.50.100 2 80 1.3E-22 T 14-10-2018 BD65_3032 b5ccac45b935342a39ed2f765291085a 405 SUPERFAMILY SSF52777 175 404 2.31E-89 T 14-10-2018 BD65_3032 b5ccac45b935342a39ed2f765291085a 405 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 405 9.0E-189 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BD65_3032 b5ccac45b935342a39ed2f765291085a 405 Gene3D G3DSA:3.30.559.10 173 405 1.8E-97 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BD65_3032 b5ccac45b935342a39ed2f765291085a 405 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BD65_3032 b5ccac45b935342a39ed2f765291085a 405 SUPERFAMILY SSF47005 106 150 1.07E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BD65_3032 b5ccac45b935342a39ed2f765291085a 405 Pfam PF02817 e3 binding domain 114 146 4.4E-11 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BD65_3032 b5ccac45b935342a39ed2f765291085a 405 SUPERFAMILY SSF51230 2 95 2.49E-24 T 14-10-2018 IPR011053 Single hybrid motif BD65_3032 b5ccac45b935342a39ed2f765291085a 405 Pfam PF00364 Biotin-requiring enzyme 5 77 3.7E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.4E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Gene3D G3DSA:2.40.50.150 833 955 8.0E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Gene3D G3DSA:3.90.1110.10 317 440 5.1E-36 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.304 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Gene3D G3DSA:3.90.1110.10 157 245 8.8E-28 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Gene3D G3DSA:2.40.270.10 1009 1242 2.1E-92 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 6.2E-160 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.9E-25 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.2E-57 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Gene3D G3DSA:2.40.270.10 790 832 5.4E-7 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Gene3D G3DSA:3.90.1100.10 643 713 5.4E-21 T 14-10-2018 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Gene3D G3DSA:2.40.50.100 714 788 6.9E-32 T 14-10-2018 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 224 1.0E-6 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 336 454 3.5E-16 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Gene3D G3DSA:3.90.1800.10 1252 1306 8.1E-11 T 14-10-2018 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Gene3D G3DSA:3.90.1100.10 441 626 2.7E-70 T 14-10-2018 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 Gene3D G3DSA:3.90.1100.10 19 156 2.6E-49 T 14-10-2018 BD65_1651 ba318341451d628f2c6abc0450a81607 1342 SUPERFAMILY SSF64484 11 1340 0.0 T 14-10-2018 BD65_1247 399c0066389de2a08b9aae32a670b6ca 114 SUPERFAMILY SSF54523 33 103 1.02E-6 T 14-10-2018 BD65_1247 399c0066389de2a08b9aae32a670b6ca 114 Gene3D G3DSA:3.30.1300.30 28 114 8.0E-7 T 14-10-2018 BD65_1247 399c0066389de2a08b9aae32a670b6ca 114 TIGRFAM TIGR01707 gspI: type II secretion system protein I 1 98 6.2E-16 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 PRINTS PR00415 Aconitase family signature 286 300 1.4E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 PRINTS PR00415 Aconitase family signature 108 116 1.4E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 PRINTS PR00415 Aconitase family signature 119 132 1.4E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 PRINTS PR00415 Aconitase family signature 133 148 1.4E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 PRINTS PR00415 Aconitase family signature 343 354 1.4E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 PRINTS PR00415 Aconitase family signature 195 208 1.4E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 PRINTS PR00415 Aconitase family signature 209 222 1.4E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 PRINTS PR00415 Aconitase family signature 399 412 1.4E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 PRINTS PR00415 Aconitase family signature 82 95 1.4E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 Gene3D G3DSA:3.30.499.10 323 469 5.2E-51 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 7.1E-265 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 61.751 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 Pfam PF00330 Aconitase family (aconitate hydratase) 8 457 5.1E-162 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 Gene3D G3DSA:3.30.499.20 4 286 3.3E-99 T 14-10-2018 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 SUPERFAMILY SSF53732 2 465 2.88E-168 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BD65_2538 aa6dca80db63aa5de0eadb3d58544b44 470 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BD65_230 1da85aa232654c1a16c8cbcca860920e 215 Pfam PF00857 Isochorismatase family 3 206 9.4E-37 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 BD65_230 1da85aa232654c1a16c8cbcca860920e 215 SUPERFAMILY SSF52499 2 211 9.55E-55 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BD65_230 1da85aa232654c1a16c8cbcca860920e 215 Gene3D G3DSA:3.40.50.850 1 210 2.7E-64 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 Gene3D G3DSA:1.10.285.10 14 374 3.7E-175 T 14-10-2018 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 SUPERFAMILY SSF51735 202 446 3.94E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 Gene3D G3DSA:3.40.50.720 209 373 3.7E-175 T 14-10-2018 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 SMART SM00839 204 445 5.9E-94 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 1.3E-33 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 1.3E-33 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 1.3E-33 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 1.3E-33 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 Gene3D G3DSA:1.10.285.10 401 447 2.3E-10 T 14-10-2018 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 9.5E-51 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 SUPERFAMILY SSF53223 7 196 5.12E-74 T 14-10-2018 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 Gene3D G3DSA:3.40.50.10860 55 190 3.7E-175 T 14-10-2018 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 3.5E-86 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BD65_2103 cd208b53d4c5b1a902bf4026e3b4d800 447 PIRSF PIRSF000185 22 447 3.3E-116 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 9.0E-54 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 SMART SM01134 72 233 5.8E-72 T 14-10-2018 BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 SUPERFAMILY SSF100950 74 233 1.01E-29 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 Gene3D G3DSA:1.10.10.10 1 58 2.0E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 Gene3D G3DSA:3.30.750.70 70 133 2.7E-10 T 14-10-2018 BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 SMART SM00420 6 58 5.2E-27 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.1E-24 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.7E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.7E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BD65_2123 edda54bb2c7a67562b039c3cf1f2c848 252 SUPERFAMILY SSF46785 3 73 1.62E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1266 6fbdff29981e632775db31e4b06368ad 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 299 3.5E-119 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BD65_1266 6fbdff29981e632775db31e4b06368ad 299 Pfam PF00589 Phage integrase family 114 285 2.8E-55 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_1266 6fbdff29981e632775db31e4b06368ad 299 Gene3D G3DSA:1.10.150.130 5 100 5.8E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BD65_1266 6fbdff29981e632775db31e4b06368ad 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 4.7E-24 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BD65_1266 6fbdff29981e632775db31e4b06368ad 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 299 59.569 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BD65_1266 6fbdff29981e632775db31e4b06368ad 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 63.754 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BD65_1266 6fbdff29981e632775db31e4b06368ad 299 SUPERFAMILY SSF56349 107 297 3.83E-58 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_1266 6fbdff29981e632775db31e4b06368ad 299 SUPERFAMILY SSF47823 5 101 4.71E-37 T 14-10-2018 BD65_1266 6fbdff29981e632775db31e4b06368ad 299 Gene3D G3DSA:1.10.443.10 111 293 1.9E-78 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BD65_62 5d05285dfa0f92d311d45578ba0b7ede 212 Pfam PF02223 Thymidylate kinase 8 198 1.3E-60 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 BD65_62 5d05285dfa0f92d311d45578ba0b7ede 212 SUPERFAMILY SSF52540 1 205 1.86E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_62 5d05285dfa0f92d311d45578ba0b7ede 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 4.6E-64 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BD65_62 5d05285dfa0f92d311d45578ba0b7ede 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BD65_62 5d05285dfa0f92d311d45578ba0b7ede 212 Gene3D G3DSA:3.40.50.300 1 208 1.5E-62 T 14-10-2018 BD65_62 5d05285dfa0f92d311d45578ba0b7ede 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.269 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BD65_1859 1b5e5b0ec024014eefe877a050518858 153 Pfam PF06995 Phage P2 GpU 6 125 1.6E-43 T 14-10-2018 IPR009734 Myoviridae, GpU BD65_1859 1b5e5b0ec024014eefe877a050518858 153 PIRSF PIRSF029208 1 147 1.4E-58 T 14-10-2018 IPR016912 Bacteriophage P2, GpU BD65_983 4452a5cb19ad112403a463fcdcaf3094 693 SUPERFAMILY SSF55729 340 536 7.09E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_983 4452a5cb19ad112403a463fcdcaf3094 693 Pfam PF17176 tRNA-binding domain 562 677 5.4E-43 T 14-10-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain BD65_983 4452a5cb19ad112403a463fcdcaf3094 693 SUPERFAMILY SSF52540 159 277 2.97E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_983 4452a5cb19ad112403a463fcdcaf3094 693 Pfam PF13718 GNAT acetyltransferase 2 362 499 8.2E-10 T 14-10-2018 IPR000182 GNAT domain BD65_983 4452a5cb19ad112403a463fcdcaf3094 693 Pfam PF13718 GNAT acetyltransferase 2 503 554 5.1E-7 T 14-10-2018 IPR000182 GNAT domain BD65_983 4452a5cb19ad112403a463fcdcaf3094 693 Pfam PF05127 Helicase 221 329 6.4E-32 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 BD65_983 4452a5cb19ad112403a463fcdcaf3094 693 Gene3D G3DSA:3.40.50.11040 1 177 9.1E-59 T 14-10-2018 BD65_983 4452a5cb19ad112403a463fcdcaf3094 693 Gene3D G3DSA:3.40.50.12320 179 319 6.8E-46 T 14-10-2018 BD65_983 4452a5cb19ad112403a463fcdcaf3094 693 Gene3D G3DSA:1.20.120.890 555 692 4.9E-51 T 14-10-2018 IPR038321 TmcA, C-terminal domain superfamily BD65_983 4452a5cb19ad112403a463fcdcaf3094 693 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 5 675 47.877 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 BD65_1841 ed58b801ea0edb1e3cb32d593b57b116 176 SUPERFAMILY SSF56235 2 172 5.9E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_1841 ed58b801ea0edb1e3cb32d593b57b116 176 Gene3D G3DSA:3.60.20.10 1 173 4.8E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_1841 ed58b801ea0edb1e3cb32d593b57b116 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.7E-86 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BD65_1841 ed58b801ea0edb1e3cb32d593b57b116 176 Pfam PF00227 Proteasome subunit 2 165 1.9E-21 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 BD65_1841 ed58b801ea0edb1e3cb32d593b57b116 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.776 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BD65_1841 ed58b801ea0edb1e3cb32d593b57b116 176 PIRSF PIRSF039093 1 175 1.3E-87 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 Gene3D G3DSA:2.40.50.140 1 82 1.0E-29 T 14-10-2018 BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 Gene3D G3DSA:2.40.50.640 83 155 5.0E-30 T 14-10-2018 BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.067 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 SMART SM00357 23 79 2.5E-10 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 Pfam PF00575 S1 RNA binding domain 560 639 4.1E-10 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 5.3E-220 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 SMART SM00955 189 517 7.2E-126 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 Pfam PF08206 Ribonuclease B OB domain 24 80 5.9E-18 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 Pfam PF00773 RNB domain 189 516 1.1E-87 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 SUPERFAMILY SSF50249 8 80 6.12E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 SUPERFAMILY SSF50249 84 171 2.06E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 SUPERFAMILY SSF50249 560 643 5.43E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 SUPERFAMILY SSF50249 170 555 4.34E-116 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_310 4eef67fed449c68e7c612add3ef29ebd 644 Gene3D G3DSA:2.40.50.140 558 644 8.0E-35 T 14-10-2018 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 330 1.6E-45 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 PRINTS PR00397 Sirohaem Fe-binding site signature 478 496 4.0E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 4.0E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 478 494 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 571 57.922 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 559 9.2E-289 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 Gene3D G3DSA:3.30.413.10 141 348 5.3E-89 T 14-10-2018 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 SUPERFAMILY SSF55124 346 422 2.94E-21 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 431 558 0.0012 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 SUPERFAMILY SSF55124 14 142 2.13E-25 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 Gene3D G3DSA:3.90.480.20 17 407 5.3E-89 T 14-10-2018 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 SUPERFAMILY SSF56014 150 344 3.93E-57 T 14-10-2018 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 416 5.3E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 139 3.6E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 Gene3D G3DSA:3.30.413.10 426 568 9.2E-36 T 14-10-2018 BD65_2624 233adaa30dd87f0a9d14a07928309bd8 571 SUPERFAMILY SSF56014 429 561 7.33E-35 T 14-10-2018 BD65_890 cf1adf97b6d45d587a08ccdb93716afa 405 Gene3D G3DSA:3.40.47.10 4 258 8.7E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_890 cf1adf97b6d45d587a08ccdb93716afa 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 360 5.9E-30 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BD65_890 cf1adf97b6d45d587a08ccdb93716afa 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 245 1.4E-40 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BD65_890 cf1adf97b6d45d587a08ccdb93716afa 405 SUPERFAMILY SSF53901 1 250 4.45E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_890 cf1adf97b6d45d587a08ccdb93716afa 405 SUPERFAMILY SSF53901 214 403 6.58E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_890 cf1adf97b6d45d587a08ccdb93716afa 405 SMART SM00825 Beta-ketoacyl synthase 4 405 3.1E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BD65_890 cf1adf97b6d45d587a08ccdb93716afa 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site BD65_890 cf1adf97b6d45d587a08ccdb93716afa 405 Gene3D G3DSA:3.40.47.10 259 405 3.9E-51 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 SMART SM00267 438 610 3.7E-52 T 14-10-2018 IPR000160 GGDEF domain BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 Pfam PF08448 PAS fold 338 439 7.1E-9 T 14-10-2018 IPR013656 PAS fold-4 BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 SUPERFAMILY SSF55785 186 297 3.06E-24 T 14-10-2018 IPR035965 PAS domain superfamily BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 Pfam PF08447 PAS fold 203 288 1.1E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 Gene3D G3DSA:3.30.450.40 13 158 3.1E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 Gene3D G3DSA:3.30.450.20 315 447 8.5E-20 T 14-10-2018 BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 330 445 1.1E-8 T 14-10-2018 IPR000014 PAS domain BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 176 301 8.3E-25 T 14-10-2018 IPR000014 PAS domain BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 SUPERFAMILY SSF55785 324 435 1.08E-11 T 14-10-2018 IPR035965 PAS domain superfamily BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 SUPERFAMILY SSF55073 454 608 6.83E-40 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 Gene3D G3DSA:3.30.70.270 448 610 1.6E-49 T 14-10-2018 BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 SMART SM00065 26 171 7.0E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 Pfam PF01590 GAF domain 31 151 3.4E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 SMART SM00086 252 294 4.2E-8 T 14-10-2018 IPR001610 PAC motif BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 SUPERFAMILY SSF55781 30 158 7.85E-25 T 14-10-2018 BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 446 608 1.7E-36 T 14-10-2018 IPR000160 GGDEF domain BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 Gene3D G3DSA:3.30.450.20 176 310 1.4E-24 T 14-10-2018 BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 Pfam PF00990 Diguanylate cyclase, GGDEF domain 450 605 5.1E-43 T 14-10-2018 IPR000160 GGDEF domain BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 SMART SM00091 331 397 1.0 T 14-10-2018 IPR000014 PAS domain BD65_309 e86765e63555eb9bd5347e3ffa97f28f 610 SMART SM00091 179 245 1.6E-11 T 14-10-2018 IPR000014 PAS domain BD65_2269 38bde196cbafbf72b79f0c70c1a62044 203 SMART SM00421 140 197 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2269 38bde196cbafbf72b79f0c70c1a62044 203 SUPERFAMILY SSF46894 134 195 1.26E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2269 38bde196cbafbf72b79f0c70c1a62044 203 Gene3D G3DSA:3.40.50.12740 3 200 6.0E-13 T 14-10-2018 BD65_2269 38bde196cbafbf72b79f0c70c1a62044 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 194 1.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2269 38bde196cbafbf72b79f0c70c1a62044 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.4E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2269 38bde196cbafbf72b79f0c70c1a62044 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.4E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2269 38bde196cbafbf72b79f0c70c1a62044 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.4E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PIRSF PIRSF001336 17 659 6.2E-254 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 657 1.3E-270 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 658 42.687 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 101 368 2.7E-68 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 125 143 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 Gene3D G3DSA:2.40.37.10 39 591 5.5E-235 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 Gene3D G3DSA:3.20.20.10 94 370 5.5E-235 T 14-10-2018 IPR029066 PLP-binding barrel BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 302 315 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01180 Arginine decarboxylase signature 197 218 2.0E-72 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01180 Arginine decarboxylase signature 93 108 2.0E-72 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01180 Arginine decarboxylase signature 567 588 2.0E-72 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01180 Arginine decarboxylase signature 221 243 2.0E-72 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01180 Arginine decarboxylase signature 348 365 2.0E-72 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01180 Arginine decarboxylase signature 489 510 2.0E-72 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01180 Arginine decarboxylase signature 514 539 2.0E-72 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01180 Arginine decarboxylase signature 117 131 2.0E-72 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01180 Arginine decarboxylase signature 171 186 2.0E-72 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 SUPERFAMILY SSF50621 482 588 5.93E-8 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 Gene3D G3DSA:1.20.58.930 387 482 5.5E-235 T 14-10-2018 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 SUPERFAMILY SSF51419 93 370 1.96E-67 T 14-10-2018 IPR029066 PLP-binding barrel BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 125 143 8.3E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 358 377 8.3E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 147 159 8.3E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 264 277 8.3E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BD65_1296 0cf06b2559c986f4ec27f681601d4657 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 567 580 8.3E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 3.0E-14 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 3.0E-14 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 3.0E-14 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00097 Anthranilate synthase component II signature 52 61 7.4E-37 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00097 Anthranilate synthase component II signature 124 136 7.4E-37 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00097 Anthranilate synthase component II signature 4 18 7.4E-37 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00097 Anthranilate synthase component II signature 79 90 7.4E-37 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00097 Anthranilate synthase component II signature 166 179 7.4E-37 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00097 Anthranilate synthase component II signature 104 112 7.4E-37 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 Gene3D G3DSA:3.40.50.880 1 193 1.1E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 2.8E-6 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 2.8E-6 T 14-10-2018 BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 SUPERFAMILY SSF52317 4 191 1.99E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.8E-44 T 14-10-2018 IPR017926 Glutamine amidotransferase BD65_285 6b735b0beda05fb13ff91ba27f03f8b4 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 1.7E-54 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_2806 9a105e3068362c94146364e14bd7c413 156 SUPERFAMILY SSF52121 3 154 1.06E-59 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_2806 9a105e3068362c94146364e14bd7c413 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 7.7E-59 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_2806 9a105e3068362c94146364e14bd7c413 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.6E-55 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_2806 9a105e3068362c94146364e14bd7c413 156 Gene3D G3DSA:3.40.50.960 1 156 5.0E-63 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_2806 9a105e3068362c94146364e14bd7c413 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.969 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_760 0f63d8fd25cab0b6f912954fa097494a 262 Gene3D G3DSA:3.40.50.300 5 254 4.3E-58 T 14-10-2018 BD65_760 0f63d8fd25cab0b6f912954fa097494a 262 SUPERFAMILY SSF52540 5 228 4.5E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_760 0f63d8fd25cab0b6f912954fa097494a 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_760 0f63d8fd25cab0b6f912954fa097494a 262 Pfam PF00005 ABC transporter 22 165 1.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_760 0f63d8fd25cab0b6f912954fa097494a 262 SMART SM00382 30 215 3.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2065 0215bf3312c31b9c7cd3fea6f024a8dd 464 Gene3D G3DSA:1.20.1740.10 7 461 9.1E-66 T 14-10-2018 BD65_2065 0215bf3312c31b9c7cd3fea6f024a8dd 464 Pfam PF00324 Amino acid permease 16 450 4.3E-107 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BD65_2065 0215bf3312c31b9c7cd3fea6f024a8dd 464 PIRSF PIRSF006060 1 464 3.0E-74 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_2065 0215bf3312c31b9c7cd3fea6f024a8dd 464 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BD65_1348 8771465a2bec97fde887d48962e67804 2386 SUPERFAMILY SSF47336 2056 2128 3.31E-13 T 14-10-2018 IPR036736 ACP-like superfamily BD65_1348 8771465a2bec97fde887d48962e67804 2386 SUPERFAMILY SSF53474 2137 2376 2.84E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1348 8771465a2bec97fde887d48962e67804 2386 SUPERFAMILY SSF52777 21 207 6.56E-21 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Gene3D G3DSA:3.40.50.1820 2054 2377 1.9E-103 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1348 8771465a2bec97fde887d48962e67804 2386 Gene3D G3DSA:3.30.559.30 236 461 1.7E-48 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Gene3D G3DSA:3.40.50.12780 1537 1938 1.3E-137 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Gene3D G3DSA:3.40.50.12780 482 880 1.2E-120 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Pfam PF00975 Thioesterase domain 2154 2363 3.7E-31 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Gene3D G3DSA:3.30.300.30 1940 2053 1.5E-31 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Pfam PF00550 Phosphopantetheine attachment site 2065 2127 2.9E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BD65_1348 8771465a2bec97fde887d48962e67804 2386 Pfam PF00550 Phosphopantetheine attachment site 1000 1061 1.4E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BD65_1348 8771465a2bec97fde887d48962e67804 2386 Pfam PF13193 AMP-binding enzyme C-terminal domain 895 972 5.1E-10 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BD65_1348 8771465a2bec97fde887d48962e67804 2386 Pfam PF13193 AMP-binding enzyme C-terminal domain 1954 2037 5.9E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BD65_1348 8771465a2bec97fde887d48962e67804 2386 ProSitePatterns PS00455 Putative AMP-binding domain signature. 632 643 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_1348 8771465a2bec97fde887d48962e67804 2386 Gene3D G3DSA:3.30.559.10 19 230 3.2E-37 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BD65_1348 8771465a2bec97fde887d48962e67804 2386 SUPERFAMILY SSF52777 1277 1510 1.11E-43 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Pfam PF00668 Condensation domain 1094 1526 2.6E-69 T 14-10-2018 IPR001242 Condensation domain BD65_1348 8771465a2bec97fde887d48962e67804 2386 Pfam PF00668 Condensation domain 14 469 3.2E-53 T 14-10-2018 IPR001242 Condensation domain BD65_1348 8771465a2bec97fde887d48962e67804 2386 SUPERFAMILY SSF56801 450 1010 1.44E-138 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 SUPERFAMILY SSF56801 1520 2075 1.44E-154 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Gene3D G3DSA:3.30.559.30 1278 1523 1.9E-98 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Pfam PF00501 AMP-binding enzyme 492 887 4.5E-89 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Pfam PF00501 AMP-binding enzyme 1546 1946 1.4E-100 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Gene3D G3DSA:1.10.1200.10 984 1069 1.1E-18 T 14-10-2018 IPR036736 ACP-like superfamily BD65_1348 8771465a2bec97fde887d48962e67804 2386 Gene3D G3DSA:3.30.559.10 1101 1461 1.9E-98 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BD65_1348 8771465a2bec97fde887d48962e67804 2386 SUPERFAMILY SSF47336 991 1061 8.92E-14 T 14-10-2018 IPR036736 ACP-like superfamily BD65_1348 8771465a2bec97fde887d48962e67804 2386 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1567 1970 6.1E-129 T 14-10-2018 IPR010071 Amino acid adenylation domain BD65_1348 8771465a2bec97fde887d48962e67804 2386 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 512 911 1.5E-114 T 14-10-2018 IPR010071 Amino acid adenylation domain BD65_1348 8771465a2bec97fde887d48962e67804 2386 SUPERFAMILY SSF52777 1092 1292 8.34E-28 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 SUPERFAMILY SSF52777 215 453 3.78E-30 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 SMART SM00823 Phosphopantetheine attachment site 997 1065 0.0063 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BD65_1348 8771465a2bec97fde887d48962e67804 2386 SMART SM00823 Phosphopantetheine attachment site 2062 2131 0.036 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BD65_1348 8771465a2bec97fde887d48962e67804 2386 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1685 1696 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_1348 8771465a2bec97fde887d48962e67804 2386 SMART SM00824 Thioesterase 2156 2372 6.5E-6 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 BD65_1348 8771465a2bec97fde887d48962e67804 2386 Gene3D G3DSA:3.30.300.30 881 983 2.7E-29 T 14-10-2018 BD65_1348 8771465a2bec97fde887d48962e67804 2386 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2086 2101 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site BD65_2356 c308ceff39299cf0ad61d2b33be9719f 136 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 BD65_2356 c308ceff39299cf0ad61d2b33be9719f 136 SUPERFAMILY SSF89919 2 110 2.35E-31 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily BD65_2356 c308ceff39299cf0ad61d2b33be9719f 136 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 103 3.0E-49 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BD65_2356 c308ceff39299cf0ad61d2b33be9719f 136 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 6.5E-41 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BD65_2356 c308ceff39299cf0ad61d2b33be9719f 136 Pfam PF02033 Ribosome-binding factor A 7 115 3.5E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BD65_2356 c308ceff39299cf0ad61d2b33be9719f 136 Gene3D G3DSA:3.30.300.20 1 111 2.0E-38 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BD65_2356 c308ceff39299cf0ad61d2b33be9719f 136 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 116 25.761 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 SUPERFAMILY SSF52980 900 1184 4.93E-91 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 Gene3D G3DSA:3.90.320.10 889 1189 1.6E-110 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 Gene3D G3DSA:3.40.50.300 445 845 1.4E-167 T 14-10-2018 BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 7 1183 23.017 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 SUPERFAMILY SSF52540 18 819 3.73E-107 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 Gene3D G3DSA:3.40.50.300 9 436 1.0E-162 T 14-10-2018 BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 436 1.6E-59 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 Gene3D G3DSA:1.10.3170.10 156 349 1.0E-162 T 14-10-2018 BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 Pfam PF13361 UvrD-like helicase C-terminal domain 443 808 8.4E-19 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1182 0.0 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BD65_1220 e7d1858b99789129a9de637ffaf4893f 1194 Gene3D G3DSA:1.10.486.10 583 728 1.4E-167 T 14-10-2018 BD65_3223 3e210456f6514c93753243050d2b3316 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 BD65_3223 3e210456f6514c93753243050d2b3316 758 SUPERFAMILY SSF52540 168 426 2.45E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3223 3e210456f6514c93753243050d2b3316 758 Gene3D G3DSA:3.40.50.300 438 651 3.3E-79 T 14-10-2018 BD65_3223 3e210456f6514c93753243050d2b3316 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 732 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 BD65_3223 3e210456f6514c93753243050d2b3316 758 Gene3D G3DSA:3.40.50.300 158 349 4.1E-63 T 14-10-2018 BD65_3223 3e210456f6514c93753243050d2b3316 758 Gene3D G3DSA:1.10.8.60 351 437 1.2E-35 T 14-10-2018 BD65_3223 3e210456f6514c93753243050d2b3316 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BD65_3223 3e210456f6514c93753243050d2b3316 758 SMART SM01086 652 741 7.5E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BD65_3223 3e210456f6514c93753243050d2b3316 758 SMART SM00382 205 351 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3223 3e210456f6514c93753243050d2b3316 758 SMART SM00382 486 653 2.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3223 3e210456f6514c93753243050d2b3316 758 Gene3D G3DSA:1.10.8.60 652 757 3.5E-35 T 14-10-2018 BD65_3223 3e210456f6514c93753243050d2b3316 758 Gene3D G3DSA:1.10.1780.10 1 143 1.0E-44 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BD65_3223 3e210456f6514c93753243050d2b3316 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.2E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_3223 3e210456f6514c93753243050d2b3316 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.2E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_3223 3e210456f6514c93753243050d2b3316 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.2E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_3223 3e210456f6514c93753243050d2b3316 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.2E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_3223 3e210456f6514c93753243050d2b3316 758 SUPERFAMILY SSF81923 1 141 3.66E-58 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BD65_3223 3e210456f6514c93753243050d2b3316 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 342 5.8E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_3223 3e210456f6514c93753243050d2b3316 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.1E-14 T 14-10-2018 IPR004176 Clp, N-terminal BD65_3223 3e210456f6514c93753243050d2b3316 758 SUPERFAMILY SSF52540 436 747 3.86E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3223 3e210456f6514c93753243050d2b3316 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 646 3.2E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_3223 3e210456f6514c93753243050d2b3316 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 2.3E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BD65_123 7a45492fba0e996a04e93383605605d5 495 Gene3D G3DSA:3.40.605.10 10 452 1.1E-138 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BD65_123 7a45492fba0e996a04e93383605605d5 495 Gene3D G3DSA:3.40.309.10 250 440 1.1E-138 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BD65_123 7a45492fba0e996a04e93383605605d5 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BD65_123 7a45492fba0e996a04e93383605605d5 495 SUPERFAMILY SSF53720 4 458 2.36E-120 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BD65_123 7a45492fba0e996a04e93383605605d5 495 Pfam PF00171 Aldehyde dehydrogenase family 12 461 9.1E-118 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BD65_123 7a45492fba0e996a04e93383605605d5 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BD65_123 7a45492fba0e996a04e93383605605d5 495 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 489 8.3E-254 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 BD65_123 7a45492fba0e996a04e93383605605d5 495 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 489 57.447 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 Pfam PF08442 ATP-grasp domain 2 203 1.5E-83 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 Gene3D G3DSA:3.40.50.261 240 387 3.1E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 Gene3D G3DSA:3.30.1490.20 21 104 4.6E-97 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 SUPERFAMILY SSF52210 240 384 4.84E-52 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 Pfam PF00549 CoA-ligase 262 382 3.7E-24 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.401 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 SUPERFAMILY SSF56059 1 238 3.18E-81 T 14-10-2018 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 Gene3D G3DSA:3.30.470.20 1 234 4.6E-97 T 14-10-2018 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.6E-181 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_3033 9c66bffb5120ab9dc517e0a5bbe7b977 388 PIRSF PIRSF001554 1 388 8.4E-155 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_370 78d82f13cd9560c7ac908022e7308aee 241 SUPERFAMILY SSF52172 1 187 1.36E-31 T 14-10-2018 IPR011006 CheY-like superfamily BD65_370 78d82f13cd9560c7ac908022e7308aee 241 Pfam PF00072 Response regulator receiver domain 4 112 2.7E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_370 78d82f13cd9560c7ac908022e7308aee 241 SMART SM00448 2 112 3.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_370 78d82f13cd9560c7ac908022e7308aee 241 Gene3D G3DSA:3.40.50.2300 1 118 4.6E-27 T 14-10-2018 BD65_370 78d82f13cd9560c7ac908022e7308aee 241 SMART SM00862 155 231 2.8E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_370 78d82f13cd9560c7ac908022e7308aee 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 5.9E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_370 78d82f13cd9560c7ac908022e7308aee 241 Gene3D G3DSA:1.10.10.10 119 238 1.9E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 Gene3D G3DSA:1.20.1260.10 1 157 6.8E-71 T 14-10-2018 IPR012347 Ferritin-like BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 PRINTS PR00601 Bacterioferritin signature 107 127 1.3E-74 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 PRINTS PR00601 Bacterioferritin signature 128 149 1.3E-74 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 PRINTS PR00601 Bacterioferritin signature 3 22 1.3E-74 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 PRINTS PR00601 Bacterioferritin signature 23 43 1.3E-74 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 PRINTS PR00601 Bacterioferritin signature 86 106 1.3E-74 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 PRINTS PR00601 Bacterioferritin signature 44 64 1.3E-74 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 PRINTS PR00601 Bacterioferritin signature 65 85 1.3E-74 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 PIRSF PIRSF002560 1 157 1.3E-70 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 SUPERFAMILY SSF47240 1 156 1.05E-52 T 14-10-2018 IPR009078 Ferritin-like superfamily BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 1.3E-79 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BD65_2206 e0f4ec0d9a4324fa449521d6e5123b6c 157 Pfam PF00210 Ferritin-like domain 8 143 5.8E-39 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BD65_2457 a4667b212960b7c2eb6780ca70146a80 356 Gene3D G3DSA:3.30.1180.20 184 356 2.5E-63 T 14-10-2018 BD65_2457 a4667b212960b7c2eb6780ca70146a80 356 Pfam PF02733 Dak1 domain 17 351 8.2E-126 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BD65_2457 a4667b212960b7c2eb6780ca70146a80 356 SUPERFAMILY SSF82549 11 355 5.49E-125 T 14-10-2018 BD65_2457 a4667b212960b7c2eb6780ca70146a80 356 Gene3D G3DSA:3.40.50.10440 11 183 1.6E-63 T 14-10-2018 BD65_2457 a4667b212960b7c2eb6780ca70146a80 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 7.8E-147 T 14-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.727 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 SUPERFAMILY SSF100920 384 533 4.32E-51 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 Gene3D G3DSA:3.30.420.40 23 374 3.3E-112 T 14-10-2018 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 Gene3D G3DSA:3.90.640.10 238 311 3.3E-112 T 14-10-2018 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 Gene3D G3DSA:2.60.34.10 389 518 3.0E-50 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 Gene3D G3DSA:3.30.420.40 194 361 3.3E-112 T 14-10-2018 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 SUPERFAMILY SSF100934 504 615 1.16E-35 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 SUPERFAMILY SSF53067 200 377 1.51E-50 T 14-10-2018 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 Gene3D G3DSA:1.20.1270.10 520 615 4.5E-27 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 Pfam PF00012 Hsp70 protein 22 600 5.4E-194 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 SUPERFAMILY SSF53067 20 196 5.5E-51 T 14-10-2018 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 5.8E-270 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.0E-55 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.0E-55 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.0E-55 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.0E-55 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.0E-55 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.0E-55 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.0E-55 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 PRINTS PR00301 70kDa heat shock protein signature 70 78 1.0E-55 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1044 e71097f9b11922bd9e58caa1d34f933b 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.0E-55 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 Gene3D G3DSA:3.40.50.300 76 344 6.4E-113 T 14-10-2018 BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 3.1E-262 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 SUPERFAMILY SSF52540 77 348 3.62E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 SUPERFAMILY SSF50615 1 75 2.62E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 SMART SM00382 142 405 1.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.849 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 3.8E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 Gene3D G3DSA:1.10.1140.10 345 460 4.4E-60 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 Gene3D G3DSA:2.40.10.170 2 75 1.0E-30 T 14-10-2018 BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 SUPERFAMILY SSF47917 345 459 2.09E-55 T 14-10-2018 BD65_1989 e4aea7c19dfb288d5574ee9e70d00c9d 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 1.3E-21 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_2958 c938b9043e86da33d495fb37e2476698 319 SUPERFAMILY SSF55073 163 317 4.94E-44 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_2958 c938b9043e86da33d495fb37e2476698 319 SMART SM00267 147 318 2.6E-57 T 14-10-2018 IPR000160 GGDEF domain BD65_2958 c938b9043e86da33d495fb37e2476698 319 Gene3D G3DSA:3.30.70.270 143 318 3.0E-52 T 14-10-2018 BD65_2958 c938b9043e86da33d495fb37e2476698 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 314 1.9E-45 T 14-10-2018 IPR000160 GGDEF domain BD65_2958 c938b9043e86da33d495fb37e2476698 319 Pfam PF05230 MASE2 domain 2 75 9.8E-23 T 14-10-2018 IPR007894 MASE2 BD65_2958 c938b9043e86da33d495fb37e2476698 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 318 2.2E-53 T 14-10-2018 IPR000160 GGDEF domain BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 SUPERFAMILY SSF55666 450 548 1.4E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 SMART SM00322 552 617 1.4E-12 T 14-10-2018 IPR004087 K Homology domain GO:0003676 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 SUPERFAMILY SSF54791 554 622 2.15E-17 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 SMART SM00316 620 690 6.1E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 SUPERFAMILY SSF54211 291 488 2.43E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Pfam PF00013 KH domain 556 614 1.6E-9 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Pfam PF00575 S1 RNA binding domain 619 690 3.3E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Gene3D G3DSA:3.30.1370.10 550 621 2.4E-19 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 3.0E-18 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 6.0E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Gene3D G3DSA:3.30.230.70 236 549 5.5E-116 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 SUPERFAMILY SSF55666 145 235 1.96E-30 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 PIRSF PIRSF005499 2 705 4.3E-302 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 320 2.3E-25 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 SUPERFAMILY SSF54211 5 144 3.64E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 1.2E-13 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 2.4E-7 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 SUPERFAMILY SSF50249 608 692 2.23E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.548 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Gene3D G3DSA:2.40.50.140 622 693 8.6E-29 T 14-10-2018 BD65_2359 dc5fe321e204e7e3a999fb0d64e92d6a 706 Gene3D G3DSA:3.30.230.70 4 235 1.1E-78 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_2844 8d184cba4d15f1535b5d5f9b9eb8acec 589 Pfam PF00664 ABC transporter transmembrane region 21 291 6.9E-39 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BD65_2844 8d184cba4d15f1535b5d5f9b9eb8acec 589 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2844 8d184cba4d15f1535b5d5f9b9eb8acec 589 Gene3D G3DSA:1.20.1560.10 2 319 3.6E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_2844 8d184cba4d15f1535b5d5f9b9eb8acec 589 Pfam PF00005 ABC transporter 352 500 9.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2844 8d184cba4d15f1535b5d5f9b9eb8acec 589 SUPERFAMILY SSF90123 7 320 3.27E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_2844 8d184cba4d15f1535b5d5f9b9eb8acec 589 SMART SM00382 361 547 2.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2844 8d184cba4d15f1535b5d5f9b9eb8acec 589 SUPERFAMILY SSF52540 332 572 9.02E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2844 8d184cba4d15f1535b5d5f9b9eb8acec 589 Gene3D G3DSA:3.40.50.300 327 586 3.7E-78 T 14-10-2018 BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 5.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 5.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 Gene3D G3DSA:3.40.50.720 1 250 1.2E-69 T 14-10-2018 BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 249 1.1E-106 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 SUPERFAMILY SSF51735 9 249 2.01E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 248 2.2E-52 T 14-10-2018 BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 97 117 1.4E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 77 94 1.4E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 201 220 1.4E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 227 246 1.4E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 162 185 1.4E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 1.4E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BD65_1338 241ec585fa4cf1ef4e9949ef7b207073 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BD65_49 9374872b6d3cb607b07c3f55670d5142 1143 Gene3D G3DSA:2.40.50.140 32 125 1.2E-33 T 14-10-2018 BD65_49 9374872b6d3cb607b07c3f55670d5142 1143 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1108 1140 4.5E-16 T 14-10-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal BD65_49 9374872b6d3cb607b07c3f55670d5142 1143 Hamap MF_00970 Ribonuclease E [rne]. 1 1129 38.355 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 BD65_49 9374872b6d3cb607b07c3f55670d5142 1143 SMART SM00316 37 119 9.6E-13 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_49 9374872b6d3cb607b07c3f55670d5142 1143 Gene3D G3DSA:3.40.1260.20 401 510 1.1E-42 T 14-10-2018 BD65_49 9374872b6d3cb607b07c3f55670d5142 1143 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 7.4E-169 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BD65_49 9374872b6d3cb607b07c3f55670d5142 1143 Pfam PF00575 S1 RNA binding domain 36 118 1.4E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_49 9374872b6d3cb607b07c3f55670d5142 1143 Pfam PF10150 Ribonuclease E/G family 121 391 1.2E-91 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BD65_49 9374872b6d3cb607b07c3f55670d5142 1143 SUPERFAMILY SSF50249 40 124 1.18E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 Gene3D G3DSA:1.10.3210.10 32 207 2.4E-39 T 14-10-2018 BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 Pfam PF13291 ACT domain 664 740 2.5E-17 T 14-10-2018 IPR002912 ACT domain BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 Gene3D G3DSA:3.10.20.30 399 471 6.3E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 SUPERFAMILY SSF81271 398 464 3.92E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 SUPERFAMILY SSF81301 196 409 2.13E-64 T 14-10-2018 BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 Gene3D G3DSA:3.30.70.260 663 743 4.2E-18 T 14-10-2018 BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 SMART SM00954 251 361 3.5E-66 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 Pfam PF02824 TGS domain 405 464 7.5E-21 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 Gene3D G3DSA:3.30.460.10 209 341 3.5E-50 T 14-10-2018 BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 Pfam PF13328 HD domain 50 191 2.8E-41 T 14-10-2018 IPR003607 HD/PDEase domain BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.3E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 739 4.2E-188 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 SUPERFAMILY SSF55021 665 741 1.89E-13 T 14-10-2018 BD65_2617 c6ebd7f8b4f4f79504daa4cf9f432d8c 744 SUPERFAMILY SSF109604 26 207 1.66E-46 T 14-10-2018 BD65_392 2c71ad09489c665d7b8a4f65e56b8ff3 297 Pfam PF01171 PP-loop family 41 203 1.2E-14 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BD65_392 2c71ad09489c665d7b8a4f65e56b8ff3 297 Gene3D G3DSA:3.40.50.620 2 264 2.8E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_392 2c71ad09489c665d7b8a4f65e56b8ff3 297 PIRSF PIRSF004976 2 275 5.9E-70 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 BD65_392 2c71ad09489c665d7b8a4f65e56b8ff3 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 55.42 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 BD65_392 2c71ad09489c665d7b8a4f65e56b8ff3 297 SUPERFAMILY SSF52402 15 232 2.79E-53 T 14-10-2018 BD65_945 0004d9189622cd5b219ea3e7fd8bdc92 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.9E-143 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BD65_945 0004d9189622cd5b219ea3e7fd8bdc92 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BD65_945 0004d9189622cd5b219ea3e7fd8bdc92 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.0E-135 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BD65_945 0004d9189622cd5b219ea3e7fd8bdc92 322 SUPERFAMILY SSF53686 3 316 1.07E-97 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BD65_945 0004d9189622cd5b219ea3e7fd8bdc92 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 6.8E-67 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BD65_945 0004d9189622cd5b219ea3e7fd8bdc92 322 Gene3D G3DSA:3.40.50.1100 12 306 4.2E-123 T 14-10-2018 BD65_945 0004d9189622cd5b219ea3e7fd8bdc92 322 Gene3D G3DSA:3.40.50.1100 43 145 4.2E-123 T 14-10-2018 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 SUPERFAMILY SSF52172 6 186 1.39E-45 T 14-10-2018 IPR011006 CheY-like superfamily BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 Pfam PF00158 Sigma-54 interaction domain 141 307 8.6E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 2.8E-243 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 Gene3D G3DSA:3.40.50.300 130 311 5.3E-66 T 14-10-2018 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 SMART SM00448 4 115 2.9E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 Gene3D G3DSA:1.10.8.60 312 378 6.5E-19 T 14-10-2018 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 SUPERFAMILY SSF46689 381 470 2.01E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 SMART SM00382 161 312 6.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 Gene3D G3DSA:1.10.10.60 380 470 4.8E-29 T 14-10-2018 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 Pfam PF00072 Response regulator receiver domain 6 115 3.6E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 Gene3D G3DSA:3.40.50.2300 1 124 3.6E-44 T 14-10-2018 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 SUPERFAMILY SSF52540 140 384 9.31E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.7E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 8.0E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 8.0E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_1952 d66c45a92ddd36f4406000767e10d6ed 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 SUPERFAMILY SSF160240 300 361 1.44E-8 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 Pfam PF01545 Cation efflux family 12 202 8.7E-44 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 SUPERFAMILY SSF160240 381 453 3.66E-9 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 SUPERFAMILY SSF160240 211 283 9.42E-10 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 273 2.5E-60 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 Gene3D G3DSA:3.30.70.1350 367 458 7.1E-8 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 Gene3D G3DSA:3.30.70.1350 204 283 5.1E-10 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 Gene3D G3DSA:3.30.70.1350 284 363 1.3E-9 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 Pfam PF16916 Dimerisation domain of Zinc Transporter 380 453 1.2E-7 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 Pfam PF16916 Dimerisation domain of Zinc Transporter 295 361 1.8E-7 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 Pfam PF16916 Dimerisation domain of Zinc Transporter 211 279 2.4E-8 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 SUPERFAMILY SSF161111 6 204 2.75E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BD65_3130 54a7835bf19996843a26ebc2dd9f30ab 463 Gene3D G3DSA:1.20.1510.10 6 203 2.5E-59 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BD65_2164 6ace475830cb05a88f3c114480c851a6 473 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 1.1E-92 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 SUPERFAMILY SSF51735 1 112 3.71E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2164 6ace475830cb05a88f3c114480c851a6 473 Pfam PF14824 Sirohaem biosynthesis protein central 121 146 7.9E-9 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 4.1E-18 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 Gene3D G3DSA:3.30.160.110 113 148 4.1E-20 T 14-10-2018 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 Gene3D G3DSA:3.30.950.10 332 472 4.4E-46 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 Gene3D G3DSA:1.10.8.210 149 213 9.9E-27 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 Pfam PF13241 Putative NAD(P)-binding 6 115 1.3E-23 T 14-10-2018 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 Gene3D G3DSA:3.40.50.720 1 112 2.8E-29 T 14-10-2018 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 1.3E-46 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 SUPERFAMILY SSF53790 215 461 2.22E-78 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 3.2E-70 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 Gene3D G3DSA:3.40.1010.10 215 331 1.8E-43 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 51.121 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 PIRSF PIRSF036426 1 465 8.0E-202 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2164 6ace475830cb05a88f3c114480c851a6 473 SUPERFAMILY SSF75615 114 207 5.36E-27 T 14-10-2018 BD65_2207 5013740864b2f00848b0f7d1d514adb1 103 Gene3D G3DSA:3.30.70.600 1 103 7.5E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BD65_2207 5013740864b2f00848b0f7d1d514adb1 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2207 5013740864b2f00848b0f7d1d514adb1 103 SMART SM01403 7 101 2.6E-56 T 14-10-2018 IPR027486 Ribosomal protein S10 domain BD65_2207 5013740864b2f00848b0f7d1d514adb1 103 SUPERFAMILY SSF54999 5 101 1.1E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BD65_2207 5013740864b2f00848b0f7d1d514adb1 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.0E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2207 5013740864b2f00848b0f7d1d514adb1 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.0E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2207 5013740864b2f00848b0f7d1d514adb1 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.0E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2207 5013740864b2f00848b0f7d1d514adb1 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.274 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2207 5013740864b2f00848b0f7d1d514adb1 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.7E-46 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2207 5013740864b2f00848b0f7d1d514adb1 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.8E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Gene3D G3DSA:1.10.287.130 548 637 1.4E-19 T 14-10-2018 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SUPERFAMILY SSF53850 51 266 3.09E-19 T 14-10-2018 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 299 509 1.1E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SMART SM00062 52 270 0.0036 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SMART SM00062 294 512 2.6E-11 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Pfam PF00512 His Kinase A (phospho-acceptor) domain 577 639 4.6E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Pfam PF00072 Response regulator receiver domain 830 943 1.5E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SMART SM00388 576 639 6.7E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SMART SM00387 686 802 5.2E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Gene3D G3DSA:3.30.565.10 638 804 5.6E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Gene3D G3DSA:3.40.190.10 285 508 7.9E-44 T 14-10-2018 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SUPERFAMILY SSF55874 628 800 5.89E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SUPERFAMILY SSF47226 927 1039 1.31E-10 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Gene3D G3DSA:3.40.190.10 380 471 7.9E-44 T 14-10-2018 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SMART SM00448 828 944 3.0E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 PRINTS PR00344 Bacterial sensor protein C-terminal signature 786 799 3.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 PRINTS PR00344 Bacterial sensor protein C-terminal signature 727 741 3.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 755 3.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 PRINTS PR00344 Bacterial sensor protein C-terminal signature 762 780 3.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SUPERFAMILY SSF53850 287 509 3.2E-32 T 14-10-2018 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SUPERFAMILY SSF47384 563 639 4.71E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 687 800 4.4E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Gene3D G3DSA:3.40.50.2300 823 950 1.3E-22 T 14-10-2018 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Gene3D G3DSA:3.40.190.10 136 229 1.2E-30 T 14-10-2018 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Gene3D G3DSA:3.40.190.10 51 266 1.2E-30 T 14-10-2018 BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 267 4.2E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_3050 b0caf5eb48d58a066153c3efc8fcf016 1063 SUPERFAMILY SSF52172 825 945 2.13E-23 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 SUPERFAMILY SSF52540 416 618 3.55E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 SUPERFAMILY SSF81767 227 368 3.53E-45 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 SUPERFAMILY SSF52540 5 415 9.93E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 SUPERFAMILY SSF81886 620 892 7.98E-83 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.937 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 Gene3D G3DSA:1.10.3060.10 621 833 9.8E-82 T 14-10-2018 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 Pfam PF01043 SecA preprotein cross-linking domain 232 358 7.5E-40 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 PRINTS PR00906 SecA protein signature 101 115 2.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 PRINTS PR00906 SecA protein signature 63 87 2.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 PRINTS PR00906 SecA protein signature 376 393 2.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 PRINTS PR00906 SecA protein signature 170 190 2.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 PRINTS PR00906 SecA protein signature 339 361 2.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 PRINTS PR00906 SecA protein signature 117 127 2.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 PRINTS PR00906 SecA protein signature 413 426 2.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 Gene3D G3DSA:3.40.50.300 417 620 1.6E-87 T 14-10-2018 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 Pfam PF02810 SEC-C motif 884 902 1.8E-9 T 14-10-2018 IPR004027 SEC-C motif BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 SMART SM00957 6 402 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 SMART SM00958 228 358 2.0E-85 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 Gene3D G3DSA:3.40.50.300 22 415 1.8E-176 T 14-10-2018 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 Pfam PF07517 SecA DEAD-like domain 7 402 1.1E-130 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 Gene3D G3DSA:3.90.1440.10 229 368 1.8E-176 T 14-10-2018 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 ProSitePatterns PS01312 SecA family signature. 500 515 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 BD65_2565 9123bace8b6791fb52cb96dd72c84e38 905 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.2E-68 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 Gene3D G3DSA:3.40.50.150 169 372 1.8E-146 T 14-10-2018 BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 PIRSF PIRSF037618 1 703 1.3E-296 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 SUPERFAMILY SSF53335 396 701 5.77E-67 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 14-10-2018 IPR000241 Putative RNA methylase domain BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 448 664 8.7E-20 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 SUPERFAMILY SSF53335 148 373 1.39E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 Pfam PF02926 THUMP domain 23 153 1.3E-16 T 14-10-2018 IPR004114 THUMP domain GO:0003723 BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 Gene3D G3DSA:3.30.2130.30 5 255 1.8E-146 T 14-10-2018 BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.291 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 Gene3D G3DSA:3.40.50.150 484 702 4.9E-73 T 14-10-2018 BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 9.8E-61 T 14-10-2018 IPR000241 Putative RNA methylase domain BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 Gene3D G3DSA:3.30.750.80 392 483 2.7E-36 T 14-10-2018 BD65_5 abaedc9f5ce41f756c3d3d5888e2ae56 706 SMART SM00981 56 154 3.1E-19 T 14-10-2018 IPR004114 THUMP domain GO:0003723 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 PRINTS PR00143 Citrate synthase signature 379 393 4.3E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 PRINTS PR00143 Citrate synthase signature 219 234 4.3E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 PRINTS PR00143 Citrate synthase signature 359 375 4.3E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 PRINTS PR00143 Citrate synthase signature 241 269 4.3E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 PRINTS PR00143 Citrate synthase signature 165 178 4.3E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 PRINTS PR00143 Citrate synthase signature 296 316 4.3E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 PIRSF PIRSF001369 38 427 1.1E-173 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 8.7E-133 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 SUPERFAMILY SSF48256 4 422 4.19E-167 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 Gene3D G3DSA:1.10.580.10 57 410 1.0E-151 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 5.3E-235 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 Gene3D G3DSA:2.20.28.60 1 50 7.3E-22 T 14-10-2018 BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 Gene3D G3DSA:1.10.230.10 268 376 1.0E-151 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BD65_3026 4b48d5c948638aca29c57ca0e4eff437 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BD65_3134 7c3444170c6a675c26ec172359251bd5 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 174 7.1E-59 T 14-10-2018 IPR010323 Protein of unknown function DUF924 BD65_3134 7c3444170c6a675c26ec172359251bd5 179 Gene3D G3DSA:1.20.58.320 1 78 6.0E-27 T 14-10-2018 BD65_3134 7c3444170c6a675c26ec172359251bd5 179 Gene3D G3DSA:1.25.40.10 79 179 9.1E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_3134 7c3444170c6a675c26ec172359251bd5 179 SUPERFAMILY SSF48452 2 174 7.59E-65 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_366 112fb08b7d27b2095ae0634a6fb84e29 317 Pfam PF07338 Protein of unknown function (DUF1471) 120 176 1.3E-17 T 14-10-2018 IPR010854 Domain of unknown function DUF1471 BD65_366 112fb08b7d27b2095ae0634a6fb84e29 317 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 4.0E-19 T 14-10-2018 IPR010854 Domain of unknown function DUF1471 BD65_366 112fb08b7d27b2095ae0634a6fb84e29 317 Pfam PF07338 Protein of unknown function (DUF1471) 261 317 3.3E-21 T 14-10-2018 IPR010854 Domain of unknown function DUF1471 BD65_366 112fb08b7d27b2095ae0634a6fb84e29 317 SUPERFAMILY SSF159871 108 180 1.16E-16 T 14-10-2018 IPR036275 YdgH-like superfamily BD65_366 112fb08b7d27b2095ae0634a6fb84e29 317 SUPERFAMILY SSF159871 241 317 1.28E-19 T 14-10-2018 IPR036275 YdgH-like superfamily BD65_366 112fb08b7d27b2095ae0634a6fb84e29 317 Gene3D G3DSA:3.30.1660.10 107 176 8.4E-22 T 14-10-2018 IPR025543 Dodecin-like BD65_366 112fb08b7d27b2095ae0634a6fb84e29 317 Gene3D G3DSA:3.30.1660.10 245 317 1.8E-30 T 14-10-2018 IPR025543 Dodecin-like BD65_366 112fb08b7d27b2095ae0634a6fb84e29 317 SUPERFAMILY SSF159871 3 94 2.75E-21 T 14-10-2018 IPR036275 YdgH-like superfamily BD65_366 112fb08b7d27b2095ae0634a6fb84e29 317 PIRSF PIRSF014774 1 317 6.9E-180 T 14-10-2018 IPR025539 YdgH protein BD65_366 112fb08b7d27b2095ae0634a6fb84e29 317 Gene3D G3DSA:3.30.1660.10 22 91 2.4E-24 T 14-10-2018 IPR025543 Dodecin-like BD65_2278 5b40a430e3dd5a8d364564c4dd9a0b9a 244 Gene3D G3DSA:3.10.20.30 3 106 9.6E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_2278 5b40a430e3dd5a8d364564c4dd9a0b9a 244 Gene3D G3DSA:1.10.1060.10 107 244 1.2E-51 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_2278 5b40a430e3dd5a8d364564c4dd9a0b9a 244 SUPERFAMILY SSF54292 4 106 8.89E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BD65_2278 5b40a430e3dd5a8d364564c4dd9a0b9a 244 SUPERFAMILY SSF46548 107 229 7.85E-31 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_2278 5b40a430e3dd5a8d364564c4dd9a0b9a 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.3E-31 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2278 5b40a430e3dd5a8d364564c4dd9a0b9a 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_2278 5b40a430e3dd5a8d364564c4dd9a0b9a 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BD65_2278 5b40a430e3dd5a8d364564c4dd9a0b9a 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 2.8E-97 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2278 5b40a430e3dd5a8d364564c4dd9a0b9a 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 1.2E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BD65_3091 32f6451b7173d9f9d6742034251a4165 328 Gene3D G3DSA:1.10.287.470 179 206 1.8E-25 T 14-10-2018 BD65_3091 32f6451b7173d9f9d6742034251a4165 328 SUPERFAMILY SSF111369 179 324 1.7E-12 T 14-10-2018 BD65_3091 32f6451b7173d9f9d6742034251a4165 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 34 319 1.1E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BD65_3091 32f6451b7173d9f9d6742034251a4165 328 Gene3D G3DSA:1.10.287.470 108 174 5.0E-9 T 14-10-2018 BD65_3091 32f6451b7173d9f9d6742034251a4165 328 SUPERFAMILY SSF111369 41 103 8.11E-9 T 14-10-2018 BD65_3091 32f6451b7173d9f9d6742034251a4165 328 Gene3D G3DSA:2.40.50.100 43 77 2.1E-12 T 14-10-2018 BD65_3091 32f6451b7173d9f9d6742034251a4165 328 Gene3D G3DSA:2.40.30.170 242 321 1.8E-25 T 14-10-2018 BD65_3091 32f6451b7173d9f9d6742034251a4165 328 Gene3D G3DSA:2.40.50.100 207 241 1.8E-25 T 14-10-2018 BD65_3091 32f6451b7173d9f9d6742034251a4165 328 Gene3D G3DSA:1.10.287.470 78 105 2.1E-12 T 14-10-2018 BD65_269 de7590abdb79dca2e5941b1f9243c9cf 829 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 294 304 - T 14-10-2018 IPR018030 Fimbrial membrane usher, conserved site BD65_269 de7590abdb79dca2e5941b1f9243c9cf 829 SUPERFAMILY SSF141729 33 156 3.27E-27 T 14-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 BD65_269 de7590abdb79dca2e5941b1f9243c9cf 829 Pfam PF13953 PapC C-terminal domain 748 814 4.6E-23 T 14-10-2018 IPR025949 PapC-like, C-terminal domain BD65_269 de7590abdb79dca2e5941b1f9243c9cf 829 Gene3D G3DSA:2.60.40.3110 252 341 1.3E-33 T 14-10-2018 BD65_269 de7590abdb79dca2e5941b1f9243c9cf 829 Gene3D G3DSA:2.60.40.2070 745 829 2.9E-28 T 14-10-2018 BD65_269 de7590abdb79dca2e5941b1f9243c9cf 829 Pfam PF13954 PapC N-terminal domain 15 164 2.2E-35 T 14-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 BD65_269 de7590abdb79dca2e5941b1f9243c9cf 829 Gene3D G3DSA:3.10.20.410 26 153 4.0E-37 T 14-10-2018 BD65_269 de7590abdb79dca2e5941b1f9243c9cf 829 Gene3D G3DSA:2.60.40.2610 654 744 7.1E-32 T 14-10-2018 BD65_269 de7590abdb79dca2e5941b1f9243c9cf 829 Pfam PF00577 Outer membrane usher protein 183 739 1.3E-177 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BD65_1198 30f7e21c73772d480ae87f70fd20474f 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0019 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_1198 30f7e21c73772d480ae87f70fd20474f 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 2.1E-158 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 BD65_1198 30f7e21c73772d480ae87f70fd20474f 274 Gene3D G3DSA:2.160.10.10 87 257 1.7E-57 T 14-10-2018 BD65_1198 30f7e21c73772d480ae87f70fd20474f 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 7.4E-12 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_1198 30f7e21c73772d480ae87f70fd20474f 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 4.2E-25 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 BD65_1198 30f7e21c73772d480ae87f70fd20474f 274 SUPERFAMILY SSF51161 1 256 3.19E-79 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BD65_1198 30f7e21c73772d480ae87f70fd20474f 274 Gene3D G3DSA:1.10.166.10 1 70 1.6E-33 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 BD65_1198 30f7e21c73772d480ae87f70fd20474f 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.018 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 BD65_1198 30f7e21c73772d480ae87f70fd20474f 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BD65_1334 162d875a85628dc75028710a74c1f434 442 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 442 49.811 T 14-10-2018 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 BD65_1334 162d875a85628dc75028710a74c1f434 442 Pfam PF01490 Transmembrane amino acid transporter protein 24 441 3.0E-7 T 14-10-2018 IPR013057 Amino acid transporter, transmembrane domain BD65_1334 162d875a85628dc75028710a74c1f434 442 TIGRFAM TIGR00814 stp: serine transporter 16 432 1.6E-166 T 14-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 BD65_2794 2c648a28f700854253f62ea212992704 463 PIRSF PIRSF006060 4 461 2.9E-72 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_2794 2c648a28f700854253f62ea212992704 463 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BD65_2794 2c648a28f700854253f62ea212992704 463 Pfam PF00324 Amino acid permease 17 455 2.3E-110 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BD65_2794 2c648a28f700854253f62ea212992704 463 Gene3D G3DSA:1.20.1740.10 7 461 1.3E-61 T 14-10-2018 BD65_2150 c6880232a285daa5c35021413fb66325 181 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BD65_2150 c6880232a285daa5c35021413fb66325 181 Gene3D G3DSA:3.90.79.10 7 181 1.7E-46 T 14-10-2018 BD65_2150 c6880232a285daa5c35021413fb66325 181 Pfam PF00293 NUDIX domain 45 124 4.3E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_2150 c6880232a285daa5c35021413fb66325 181 SUPERFAMILY SSF55811 3 179 9.61E-40 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 89 1.8E-27 T 14-10-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 Pfam PF14814 Bifunctional transglycosylase second domain 123 207 2.2E-29 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 Gene3D G3DSA:3.30.2060.10 121 210 1.1E-266 T 14-10-2018 BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 Gene3D G3DSA:1.10.3810.10 211 414 1.1E-266 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 Gene3D G3DSA:1.20.5.100 64 106 2.5E-19 T 14-10-2018 BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 78 804 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 SUPERFAMILY SSF53955 207 413 2.53E-65 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 Gene3D G3DSA:3.40.710.10 113 771 1.1E-266 T 14-10-2018 BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 PIRSF PIRSF002799 51 825 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 SUPERFAMILY SSF56601 372 796 1.01E-106 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 Pfam PF00912 Transglycosylase 219 390 5.1E-54 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2606 72abd1624660b45c54cbabdb77e3ea54 825 Pfam PF00905 Penicillin binding protein transpeptidase domain 483 729 3.1E-21 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BD65_2675 ded477de287028e7bd1b0a351ab12e12 87 Pfam PF01313 Bacterial export proteins, family 3 4 75 3.9E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BD65_2675 ded477de287028e7bd1b0a351ab12e12 87 PIRSF PIRSF004669 1 86 2.5E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BD65_2675 ded477de287028e7bd1b0a351ab12e12 87 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 4 80 7.6E-26 T 14-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 BD65_2675 ded477de287028e7bd1b0a351ab12e12 87 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 52 74 2.1E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BD65_2675 ded477de287028e7bd1b0a351ab12e12 87 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 37 52 2.1E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BD65_2675 ded477de287028e7bd1b0a351ab12e12 87 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 16 37 2.1E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BD65_2730 9c96a1ce1f5ec6b0de4dfb9d6b13ea27 238 Pfam PF00072 Response regulator receiver domain 5 112 6.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2730 9c96a1ce1f5ec6b0de4dfb9d6b13ea27 238 Pfam PF04397 LytTr DNA-binding domain 143 235 1.5E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BD65_2730 9c96a1ce1f5ec6b0de4dfb9d6b13ea27 238 Gene3D G3DSA:2.40.50.1020 132 237 4.8E-12 T 14-10-2018 BD65_2730 9c96a1ce1f5ec6b0de4dfb9d6b13ea27 238 Gene3D G3DSA:3.40.50.2300 1 128 3.6E-31 T 14-10-2018 BD65_2730 9c96a1ce1f5ec6b0de4dfb9d6b13ea27 238 SUPERFAMILY SSF52172 1 128 1.21E-31 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2730 9c96a1ce1f5ec6b0de4dfb9d6b13ea27 238 SMART SM00448 2 112 9.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2730 9c96a1ce1f5ec6b0de4dfb9d6b13ea27 238 SMART SM00850 142 236 2.6E-25 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BD65_53 7f3eaee928b008b8c80fd81346c2a94d 55 Pfam PF01783 Ribosomal L32p protein family 2 54 1.1E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_53 7f3eaee928b008b8c80fd81346c2a94d 55 SUPERFAMILY SSF57829 2 54 1.04E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BD65_53 7f3eaee928b008b8c80fd81346c2a94d 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.225 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_53 7f3eaee928b008b8c80fd81346c2a94d 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.5E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2342 640e6d0d747d6a6e443833601cde5f02 220 Gene3D G3DSA:1.10.10.10 122 219 4.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2342 640e6d0d747d6a6e443833601cde5f02 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.5E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2342 640e6d0d747d6a6e443833601cde5f02 220 SUPERFAMILY SSF52172 1 176 7.32E-38 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2342 640e6d0d747d6a6e443833601cde5f02 220 Pfam PF00072 Response regulator receiver domain 4 113 3.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2342 640e6d0d747d6a6e443833601cde5f02 220 SMART SM00448 1 112 2.9E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2342 640e6d0d747d6a6e443833601cde5f02 220 Gene3D G3DSA:3.40.50.2300 1 121 8.6E-38 T 14-10-2018 BD65_2342 640e6d0d747d6a6e443833601cde5f02 220 SMART SM00862 145 216 5.2E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_518 5aa02b18c497a4aad4146af3920b35dd 294 Pfam PF01435 Peptidase family M48 74 289 2.2E-38 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BD65_518 5aa02b18c497a4aad4146af3920b35dd 294 Hamap MF_00188 Protease HtpX [htpX]. 1 290 26.306 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 BD65_518 5aa02b18c497a4aad4146af3920b35dd 294 Gene3D G3DSA:3.30.2010.10 64 157 2.7E-37 T 14-10-2018 BD65_2818 5649ea7da02dc81027ce3e762405e124 196 Pfam PF01965 DJ-1/PfpI family 4 169 1.8E-41 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BD65_2818 5649ea7da02dc81027ce3e762405e124 196 SUPERFAMILY SSF52317 5 189 2.29E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_2818 5649ea7da02dc81027ce3e762405e124 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 1.3E-63 T 14-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 BD65_2818 5649ea7da02dc81027ce3e762405e124 196 Gene3D G3DSA:3.40.50.880 1 196 6.5E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_3236 7bce4a6b04367e786e01db1b2b659504 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 BD65_3236 7bce4a6b04367e786e01db1b2b659504 246 Gene3D G3DSA:3.20.20.70 2 246 4.6E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_3236 7bce4a6b04367e786e01db1b2b659504 246 Pfam PF13353 4Fe-4S single cluster domain 16 131 5.0E-18 T 14-10-2018 BD65_3236 7bce4a6b04367e786e01db1b2b659504 246 SUPERFAMILY SSF102114 23 211 1.24E-22 T 14-10-2018 BD65_3236 7bce4a6b04367e786e01db1b2b659504 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.1E-106 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 BD65_3236 7bce4a6b04367e786e01db1b2b659504 246 PIRSF PIRSF000371 44 246 3.2E-45 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 BD65_3236 7bce4a6b04367e786e01db1b2b659504 246 PIRSF PIRSF000371 2 47 4.4E-11 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 BD65_3236 7bce4a6b04367e786e01db1b2b659504 246 Pfam PF04055 Radical SAM superfamily 24 178 7.5E-31 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_784 9e29c2c0069af0c25543b92d099eea47 520 Pfam PF12792 CSS motif domain associated with EAL 45 232 2.5E-34 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain BD65_784 9e29c2c0069af0c25543b92d099eea47 520 SMART SM00052 265 509 4.3E-81 T 14-10-2018 IPR001633 EAL domain BD65_784 9e29c2c0069af0c25543b92d099eea47 520 Pfam PF00563 EAL domain 272 504 6.4E-61 T 14-10-2018 IPR001633 EAL domain BD65_784 9e29c2c0069af0c25543b92d099eea47 520 Gene3D G3DSA:3.20.20.450 264 519 8.4E-72 T 14-10-2018 IPR035919 EAL domain superfamily BD65_784 9e29c2c0069af0c25543b92d099eea47 520 SUPERFAMILY SSF141868 271 516 4.71E-69 T 14-10-2018 IPR035919 EAL domain superfamily BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.152 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 SUPERFAMILY SSF50615 10 94 9.22E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 Gene3D G3DSA:2.40.30.20 1 93 1.0E-29 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.5E-261 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 PIRSF PIRSF039088 1 513 5.1E-232 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 SUPERFAMILY SSF52540 96 381 3.47E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 Gene3D G3DSA:3.40.50.300 94 382 2.1E-133 T 14-10-2018 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 2.1E-13 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.9E-45 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 5.1E-74 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 SUPERFAMILY SSF47917 383 511 1.18E-45 T 14-10-2018 BD65_1987 ed632d695d83c6a95031eabeaa28ec2a 513 Gene3D G3DSA:1.20.150.20 383 513 2.6E-50 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_3121 3a4a6d2a4d1983f5aecac1375a8cc70f 240 SUPERFAMILY SSF52540 1 235 7.42E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3121 3a4a6d2a4d1983f5aecac1375a8cc70f 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_3121 3a4a6d2a4d1983f5aecac1375a8cc70f 240 SMART SM00382 26 213 3.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3121 3a4a6d2a4d1983f5aecac1375a8cc70f 240 PIRSF PIRSF039085 1 240 9.1E-110 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BD65_3121 3a4a6d2a4d1983f5aecac1375a8cc70f 240 Gene3D G3DSA:3.40.50.300 1 239 1.5E-80 T 14-10-2018 BD65_3121 3a4a6d2a4d1983f5aecac1375a8cc70f 240 Pfam PF00005 ABC transporter 17 165 5.3E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 Gene3D G3DSA:1.10.1220.10 11 52 1.1E-22 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 SUPERFAMILY SSF47598 4 45 1.89E-10 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 Gene3D G3DSA:3.40.309.10 887 1084 1.2E-143 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 Gene3D G3DSA:3.40.605.10 636 1112 1.2E-143 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 Pfam PF01619 Proline dehydrogenase 271 570 3.6E-100 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 SUPERFAMILY SSF53720 629 1112 1.02E-128 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 Gene3D G3DSA:3.20.20.220 220 611 1.9E-160 T 14-10-2018 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 884 891 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 Gene3D G3DSA:1.20.5.550 88 139 3.0E-29 T 14-10-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 PIRSF PIRSF000197 75 1324 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 SUPERFAMILY SSF81935 89 262 4.18E-65 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 611 1115 7.5E-252 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 149 260 2.2E-45 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 SUPERFAMILY SSF51730 263 619 1.02E-122 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 912 923 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BD65_658 e26471c87082b2eebe47b6c03d90bdae 1324 Pfam PF00171 Aldehyde dehydrogenase family 662 1106 3.0E-115 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 Gene3D G3DSA:1.20.1340.10 1 81 5.4E-32 T 14-10-2018 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 Gene3D G3DSA:3.90.1150.10 370 473 1.6E-11 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 288 309 - T 14-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 35 402 2.8E-98 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 Gene3D G3DSA:3.40.640.10 84 369 7.8E-92 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 SUPERFAMILY SSF53383 1 470 2.39E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 47 66 6.4E-45 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 385 404 6.4E-45 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 73 92 6.4E-45 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 94 112 6.4E-45 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 113 132 6.4E-45 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 342 357 6.4E-45 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 29 46 6.4E-45 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 BD65_352 cf475f22b8b20da9f0263e7989ebc52e 473 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 6 25 6.4E-45 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 BD65_1971 5bf45bbfcad944457ac224308c8804b5 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1971 5bf45bbfcad944457ac224308c8804b5 501 SUPERFAMILY SSF52540 266 482 2.66E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1971 5bf45bbfcad944457ac224308c8804b5 501 Pfam PF00005 ABC transporter 22 169 8.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1971 5bf45bbfcad944457ac224308c8804b5 501 Pfam PF00005 ABC transporter 269 423 1.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1971 5bf45bbfcad944457ac224308c8804b5 501 Gene3D G3DSA:3.40.50.300 1 250 3.7E-54 T 14-10-2018 BD65_1971 5bf45bbfcad944457ac224308c8804b5 501 SMART SM00382 29 226 4.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1971 5bf45bbfcad944457ac224308c8804b5 501 SMART SM00382 277 472 4.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1971 5bf45bbfcad944457ac224308c8804b5 501 Gene3D G3DSA:3.40.50.300 255 500 5.1E-48 T 14-10-2018 BD65_1971 5bf45bbfcad944457ac224308c8804b5 501 SUPERFAMILY SSF52540 3 231 7.37E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2483 85763af52a690eed60715232e5c476d5 555 Pfam PF12848 ABC transporter 230 306 3.6E-12 T 14-10-2018 IPR032781 ABC-transporter extension domain BD65_2483 85763af52a690eed60715232e5c476d5 555 Pfam PF00005 ABC transporter 22 191 6.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2483 85763af52a690eed60715232e5c476d5 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 3.1E-294 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 BD65_2483 85763af52a690eed60715232e5c476d5 555 SMART SM00382 31 236 4.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2483 85763af52a690eed60715232e5c476d5 555 SMART SM00382 348 522 4.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2483 85763af52a690eed60715232e5c476d5 555 SUPERFAMILY SSF52540 11 243 1.27E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2483 85763af52a690eed60715232e5c476d5 555 Pfam PF00005 ABC transporter 340 473 1.1E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2483 85763af52a690eed60715232e5c476d5 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2483 85763af52a690eed60715232e5c476d5 555 SUPERFAMILY SSF52540 303 532 3.17E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2483 85763af52a690eed60715232e5c476d5 555 Gene3D G3DSA:3.40.50.300 1 285 9.7E-88 T 14-10-2018 BD65_2483 85763af52a690eed60715232e5c476d5 555 Gene3D G3DSA:3.40.50.300 286 555 7.1E-77 T 14-10-2018 BD65_3189 eb863e9c82bcdfa2c401bd25f556e1dc 254 SUPERFAMILY SSF100950 76 238 9.21E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BD65_3189 eb863e9c82bcdfa2c401bd25f556e1dc 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BD65_3189 eb863e9c82bcdfa2c401bd25f556e1dc 254 SMART SM00420 8 57 1.6E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BD65_3189 eb863e9c82bcdfa2c401bd25f556e1dc 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 55 2.2E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BD65_3189 eb863e9c82bcdfa2c401bd25f556e1dc 254 SMART SM01134 75 236 1.4E-62 T 14-10-2018 BD65_3189 eb863e9c82bcdfa2c401bd25f556e1dc 254 Pfam PF00455 DeoR C terminal sensor domain 77 235 1.1E-46 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain BD65_1821 94a0c085058e4495d1d217def26a9722 825 Gene3D G3DSA:2.170.130.10 65 192 6.4E-42 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BD65_1821 94a0c085058e4495d1d217def26a9722 825 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 51 825 2.7E-146 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 BD65_1821 94a0c085058e4495d1d217def26a9722 825 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 57 825 1.5E-106 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 BD65_1821 94a0c085058e4495d1d217def26a9722 825 Gene3D G3DSA:2.40.170.20 193 825 1.9E-136 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BD65_1821 94a0c085058e4495d1d217def26a9722 825 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 176 1.8E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BD65_1821 94a0c085058e4495d1d217def26a9722 825 Pfam PF00593 TonB dependent receptor 307 824 4.4E-32 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BD65_1821 94a0c085058e4495d1d217def26a9722 825 SUPERFAMILY SSF56935 68 825 5.5E-74 T 14-10-2018 BD65_116 3187a38fdb3583451c75fa013df4262b 585 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 110 1.0E-6 T 14-10-2018 IPR029095 NarX-like, N-terminal BD65_116 3187a38fdb3583451c75fa013df4262b 585 SUPERFAMILY SSF158472 173 221 3.53E-9 T 14-10-2018 BD65_116 3187a38fdb3583451c75fa013df4262b 585 PIRSF PIRSF003167 1 585 7.4E-190 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 BD65_116 3187a38fdb3583451c75fa013df4262b 585 Pfam PF00672 HAMP domain 173 221 1.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_116 3187a38fdb3583451c75fa013df4262b 585 Pfam PF07730 Histidine kinase 384 447 4.4E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BD65_116 3187a38fdb3583451c75fa013df4262b 585 Gene3D G3DSA:1.10.287.130 170 282 8.6E-9 T 14-10-2018 BD65_116 3187a38fdb3583451c75fa013df4262b 585 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 490 580 3.0E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_116 3187a38fdb3583451c75fa013df4262b 585 Gene3D G3DSA:3.30.565.10 455 579 4.7E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_116 3187a38fdb3583451c75fa013df4262b 585 SUPERFAMILY SSF55874 455 578 6.94E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_116 3187a38fdb3583451c75fa013df4262b 585 SMART SM00304 173 226 4.4E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_116 3187a38fdb3583451c75fa013df4262b 585 Gene3D G3DSA:1.20.120.960 39 145 4.8E-36 T 14-10-2018 BD65_116 3187a38fdb3583451c75fa013df4262b 585 SMART SM00387 488 581 4.7E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2756 5a26b137d3e9e636ce2c32b43ba7fa96 240 Pfam PF03734 L,D-transpeptidase catalytic domain 43 158 4.3E-7 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BD65_2756 5a26b137d3e9e636ce2c32b43ba7fa96 240 SUPERFAMILY SSF141523 40 158 1.07E-8 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BD65_1390 06827cd84ad540b781573d27dc817889 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 2.8E-82 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_1390 06827cd84ad540b781573d27dc817889 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 42.656 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_1390 06827cd84ad540b781573d27dc817889 217 SUPERFAMILY SSF55821 7 211 1.24E-86 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BD65_1390 06827cd84ad540b781573d27dc817889 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 5.1E-84 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_1390 06827cd84ad540b781573d27dc817889 217 Gene3D G3DSA:3.90.870.10 1 217 9.9E-96 T 14-10-2018 BD65_3125 2a7b848990248bb6790be82a646d2dc9 258 Gene3D G3DSA:3.40.50.150 9 254 3.0E-84 T 14-10-2018 BD65_3125 2a7b848990248bb6790be82a646d2dc9 258 SUPERFAMILY SSF53335 7 210 9.97E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_3125 2a7b848990248bb6790be82a646d2dc9 258 Pfam PF13649 Methyltransferase domain 36 124 1.2E-13 T 14-10-2018 BD65_3125 2a7b848990248bb6790be82a646d2dc9 258 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 257 41.943 T 14-10-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 BD65_3125 2a7b848990248bb6790be82a646d2dc9 258 Gene3D G3DSA:1.10.150.290 132 238 3.0E-84 T 14-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 BD65_238 fd1a14e1be8d78d30f3061006cd9ddf3 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 4.5E-89 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 BD65_238 fd1a14e1be8d78d30f3061006cd9ddf3 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 7.4E-106 T 14-10-2018 BD65_238 fd1a14e1be8d78d30f3061006cd9ddf3 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.1E-21 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BD65_238 fd1a14e1be8d78d30f3061006cd9ddf3 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 BD65_238 fd1a14e1be8d78d30f3061006cd9ddf3 268 SUPERFAMILY SSF56219 1 268 1.13E-87 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BD65_238 fd1a14e1be8d78d30f3061006cd9ddf3 268 Gene3D G3DSA:3.60.10.10 1 267 4.6E-83 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BD65_742 8bb28b96af8d71c312639e811169c2e7 355 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 111 335 1.0E-94 T 14-10-2018 BD65_742 8bb28b96af8d71c312639e811169c2e7 355 Pfam PF08218 Citrate lyase ligase C-terminal domain 145 331 4.4E-81 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 BD65_742 8bb28b96af8d71c312639e811169c2e7 355 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 8 337 5.1E-155 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 BD65_742 8bb28b96af8d71c312639e811169c2e7 355 SMART SM00764 145 331 4.4E-132 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 BD65_742 8bb28b96af8d71c312639e811169c2e7 355 Gene3D G3DSA:3.40.50.620 143 324 9.1E-17 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_742 8bb28b96af8d71c312639e811169c2e7 355 SUPERFAMILY SSF52374 144 333 1.41E-25 T 14-10-2018 BD65_742 8bb28b96af8d71c312639e811169c2e7 355 PIRSF PIRSF005751 1 348 2.8E-135 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 BD65_742 8bb28b96af8d71c312639e811169c2e7 355 Gene3D G3DSA:3.40.630.30 2 120 3.0E-8 T 14-10-2018 BD65_742 8bb28b96af8d71c312639e811169c2e7 355 SUPERFAMILY SSF55729 4 115 1.21E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_742 8bb28b96af8d71c312639e811169c2e7 355 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 145 201 6.4E-10 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BD65_1953 d74bb5ddbd20a1889432298610f7396c 457 Pfam PF04055 Radical SAM superfamily 57 226 2.2E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_1953 d74bb5ddbd20a1889432298610f7396c 457 SUPERFAMILY SSF102114 6 444 4.71E-145 T 14-10-2018 BD65_1953 d74bb5ddbd20a1889432298610f7396c 457 PIRSF PIRSF000167 4 454 3.9E-173 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 BD65_1953 d74bb5ddbd20a1889432298610f7396c 457 Gene3D G3DSA:1.10.10.920 364 457 1.5E-36 T 14-10-2018 BD65_1953 d74bb5ddbd20a1889432298610f7396c 457 Pfam PF06969 HemN C-terminal domain 364 431 1.1E-10 T 14-10-2018 IPR010723 HemN, C-terminal BD65_1953 d74bb5ddbd20a1889432298610f7396c 457 SMART SM00729 52 272 2.4E-55 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BD65_1953 d74bb5ddbd20a1889432298610f7396c 457 Gene3D G3DSA:3.80.30.20 1 363 1.8E-136 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BD65_1953 d74bb5ddbd20a1889432298610f7396c 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 2.0E-217 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 BD65_181 640430c21b13da7a4564aa293d901cc3 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 BD65_181 640430c21b13da7a4564aa293d901cc3 173 Gene3D G3DSA:3.30.420.10 2 159 9.1E-54 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_181 640430c21b13da7a4564aa293d901cc3 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.323 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BD65_181 640430c21b13da7a4564aa293d901cc3 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 1.5E-79 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BD65_181 640430c21b13da7a4564aa293d901cc3 173 SUPERFAMILY SSF53098 3 156 3.79E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_181 640430c21b13da7a4564aa293d901cc3 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.4E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BD65_181 640430c21b13da7a4564aa293d901cc3 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.4E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BD65_181 640430c21b13da7a4564aa293d901cc3 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.4E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BD65_181 640430c21b13da7a4564aa293d901cc3 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.4E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BD65_181 640430c21b13da7a4564aa293d901cc3 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.4E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BD65_181 640430c21b13da7a4564aa293d901cc3 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 4.4E-65 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BD65_44 66a1b1e2c97e9e6863cd41f9900422c5 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 2.0E-37 T 14-10-2018 IPR025730 Biofilm regulator BssS BD65_44 66a1b1e2c97e9e6863cd41f9900422c5 84 Pfam PF13991 BssS protein family 11 81 5.4E-37 T 14-10-2018 IPR025730 Biofilm regulator BssS BD65_1807 020afd592c1d31bf489c9dfb18d53666 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site BD65_1807 020afd592c1d31bf489c9dfb18d53666 367 Gene3D G3DSA:3.40.50.150 14 362 8.3E-144 T 14-10-2018 BD65_1807 020afd592c1d31bf489c9dfb18d53666 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.588 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 BD65_1807 020afd592c1d31bf489c9dfb18d53666 367 Gene3D G3DSA:3.40.1350.30 45 189 8.3E-144 T 14-10-2018 BD65_1807 020afd592c1d31bf489c9dfb18d53666 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 366 7.1E-187 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 BD65_1807 020afd592c1d31bf489c9dfb18d53666 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BD65_1807 020afd592c1d31bf489c9dfb18d53666 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 366 3.1E-191 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BD65_1807 020afd592c1d31bf489c9dfb18d53666 367 SUPERFAMILY SSF53335 7 365 6.9E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1058 29b7b3d6f97c989a29433cd928494593 299 Pfam PF14503 YhfZ C-terminal domain 76 299 2.6E-83 T 14-10-2018 IPR032791 Uncharacterised protein YhfZ, C-terminal domain BD65_1058 29b7b3d6f97c989a29433cd928494593 299 Gene3D G3DSA:3.40.190.10 167 256 1.5E-68 T 14-10-2018 BD65_1058 29b7b3d6f97c989a29433cd928494593 299 SUPERFAMILY SSF53850 74 299 6.09E-84 T 14-10-2018 BD65_1058 29b7b3d6f97c989a29433cd928494593 299 Pfam PF14502 Helix-turn-helix domain 25 71 1.2E-22 T 14-10-2018 BD65_1058 29b7b3d6f97c989a29433cd928494593 299 Gene3D G3DSA:3.40.190.10 91 299 1.5E-68 T 14-10-2018 BD65_1058 29b7b3d6f97c989a29433cd928494593 299 Gene3D G3DSA:1.10.10.10 18 77 1.3E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1058 29b7b3d6f97c989a29433cd928494593 299 SUPERFAMILY SSF46785 24 75 5.61E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_948 e19add76e22317870915ee3f90fa9016 169 SUPERFAMILY SSF51261 12 167 2.44E-56 T 14-10-2018 IPR011055 Duplicated hybrid motif BD65_948 e19add76e22317870915ee3f90fa9016 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.5E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BD65_948 e19add76e22317870915ee3f90fa9016 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BD65_948 e19add76e22317870915ee3f90fa9016 169 Gene3D G3DSA:2.70.70.10 9 169 5.5E-64 T 14-10-2018 IPR011055 Duplicated hybrid motif BD65_948 e19add76e22317870915ee3f90fa9016 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 1.4E-50 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BD65_2789 b13b3ec6f4fadc22a1e93aa0a4324e1b 411 Gene3D G3DSA:3.60.21.10 1 281 3.7E-88 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BD65_2789 b13b3ec6f4fadc22a1e93aa0a4324e1b 411 Gene3D G3DSA:3.30.160.720 283 345 6.8E-26 T 14-10-2018 BD65_2789 b13b3ec6f4fadc22a1e93aa0a4324e1b 411 SUPERFAMILY SSF56300 1 340 5.7E-56 T 14-10-2018 BD65_2789 b13b3ec6f4fadc22a1e93aa0a4324e1b 411 Pfam PF00149 Calcineurin-like phosphoesterase 1 94 8.0E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BD65_2789 b13b3ec6f4fadc22a1e93aa0a4324e1b 411 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 1.9E-75 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 BD65_2789 b13b3ec6f4fadc22a1e93aa0a4324e1b 411 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 283 378 2.8E-23 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain BD65_3122 09bcd85177e3442733a8c3a2971defb9 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 1.1E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BD65_3122 09bcd85177e3442733a8c3a2971defb9 218 Gene3D G3DSA:1.10.3720.10 1 216 3.7E-54 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3122 09bcd85177e3442733a8c3a2971defb9 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 3.8E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_3122 09bcd85177e3442733a8c3a2971defb9 218 SUPERFAMILY SSF161098 13 201 6.02E-44 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1263 b51df9568e84a269c65893220522193a 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 1.7E-156 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BD65_1263 b51df9568e84a269c65893220522193a 310 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 310 33.568 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BD65_1263 b51df9568e84a269c65893220522193a 310 SMART SM00937 30 140 2.5E-56 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 BD65_1263 b51df9568e84a269c65893220522193a 310 Gene3D G3DSA:3.30.70.1660 75 303 8.1E-98 T 14-10-2018 BD65_1263 b51df9568e84a269c65893220522193a 310 Pfam PF00472 RF-1 domain 173 282 1.9E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BD65_1263 b51df9568e84a269c65893220522193a 310 SUPERFAMILY SSF75620 1 309 1.57E-135 T 14-10-2018 BD65_1263 b51df9568e84a269c65893220522193a 310 Gene3D G3DSA:1.20.58.410 1 61 5.7E-15 T 14-10-2018 BD65_1263 b51df9568e84a269c65893220522193a 310 Gene3D G3DSA:3.30.160.20 171 266 8.1E-98 T 14-10-2018 BD65_1263 b51df9568e84a269c65893220522193a 310 Pfam PF03462 PCRF domain 2 164 1.4E-50 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 BD65_1263 b51df9568e84a269c65893220522193a 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BD65_1974 5d9fb330db416b7d49dfbd3ebb5f1c05 502 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 3.1E-24 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 BD65_1974 5d9fb330db416b7d49dfbd3ebb5f1c05 502 Gene3D G3DSA:2.40.128.430 331 440 3.5E-92 T 14-10-2018 BD65_1974 5d9fb330db416b7d49dfbd3ebb5f1c05 502 Gene3D G3DSA:1.20.58.1510 287 494 3.5E-92 T 14-10-2018 BD65_1974 5d9fb330db416b7d49dfbd3ebb5f1c05 502 Hamap MF_01625 ATPase RavA [ravA]. 1 498 57.586 T 14-10-2018 IPR023671 ATPase RavA GO:0005737|GO:0016887 BD65_1974 5d9fb330db416b7d49dfbd3ebb5f1c05 502 Gene3D G3DSA:1.10.8.300 222 285 5.0E-27 T 14-10-2018 BD65_1974 5d9fb330db416b7d49dfbd3ebb5f1c05 502 Gene3D G3DSA:3.40.50.300 1 221 5.4E-62 T 14-10-2018 BD65_1974 5d9fb330db416b7d49dfbd3ebb5f1c05 502 SUPERFAMILY SSF52540 22 287 3.35E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1974 5d9fb330db416b7d49dfbd3ebb5f1c05 502 SMART SM00382 38 187 3.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1974 5d9fb330db416b7d49dfbd3ebb5f1c05 502 Pfam PF12592 Protein of unknown function (DUF3763) 443 497 3.9E-20 T 14-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 2.7E-21 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 PIRSF PIRSF036426 1 465 1.1E-203 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 Gene3D G3DSA:3.40.50.720 1 112 3.4E-33 T 14-10-2018 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 2.6E-80 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 Gene3D G3DSA:1.10.8.210 149 212 6.9E-17 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 SUPERFAMILY SSF53790 213 455 1.26E-80 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 Pfam PF13241 Putative NAD(P)-binding 6 115 1.1E-29 T 14-10-2018 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 9.6E-8 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 9.1E-50 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 SUPERFAMILY SSF51735 2 113 7.88E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 Gene3D G3DSA:3.30.160.110 113 148 6.7E-19 T 14-10-2018 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 1.4E-92 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 Gene3D G3DSA:3.30.950.10 331 468 4.9E-46 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 Gene3D G3DSA:3.40.1010.10 214 330 2.6E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 52.545 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BD65_2629 464d6567e0bc6a5bfd2c67f96d48358b 472 SUPERFAMILY SSF75615 114 209 9.29E-28 T 14-10-2018 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 Pfam PF00672 HAMP domain 218 263 5.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 Gene3D G3DSA:1.10.287.950 216 518 3.7E-98 T 14-10-2018 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 Pfam PF02203 Tar ligand binding domain homologue 1 175 5.1E-50 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 SUPERFAMILY SSF47170 25 181 1.07E-43 T 14-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 SMART SM00283 269 516 2.9E-95 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 3.7E-89 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 3.7E-89 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 3.7E-89 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 3.7E-89 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 3.7E-89 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 3.7E-89 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.7E-89 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 SMART SM00304 216 268 4.7E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 Gene3D G3DSA:1.20.120.30 22 193 1.1E-57 T 14-10-2018 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 SUPERFAMILY SSF58104 236 519 1.57E-75 T 14-10-2018 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 SMART SM00319 44 182 6.2E-41 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 4.3E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_713 cbbd495cbdf3f8d6477aa2621243bf48 555 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 14-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BD65_2695 c7d980e6c20daba998ad6a03c7e651d7 199 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.0E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_2695 c7d980e6c20daba998ad6a03c7e651d7 199 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 3.2E-11 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BD65_2695 c7d980e6c20daba998ad6a03c7e651d7 199 PRINTS PR00885 Bacterial general secretion pathway protein H signature 142 157 3.2E-11 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BD65_2695 c7d980e6c20daba998ad6a03c7e651d7 199 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 3.2E-11 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BD65_2695 c7d980e6c20daba998ad6a03c7e651d7 199 Pfam PF12019 Type II transport protein GspH 46 170 6.2E-7 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BD65_2695 c7d980e6c20daba998ad6a03c7e651d7 199 SUPERFAMILY SSF54523 13 125 2.12E-9 T 14-10-2018 BD65_2695 c7d980e6c20daba998ad6a03c7e651d7 199 Gene3D G3DSA:3.55.40.10 38 186 2.5E-22 T 14-10-2018 BD65_2695 c7d980e6c20daba998ad6a03c7e651d7 199 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 11 167 8.2E-18 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BD65_1967 0dfeab56ac5938f5ccd30472b1ca4cfd 330 Pfam PF13377 Periplasmic binding protein-like domain 166 327 1.0E-43 T 14-10-2018 BD65_1967 0dfeab56ac5938f5ccd30472b1ca4cfd 330 Gene3D G3DSA:3.40.50.2300 158 320 2.9E-84 T 14-10-2018 BD65_1967 0dfeab56ac5938f5ccd30472b1ca4cfd 330 Gene3D G3DSA:1.10.260.40 1 56 3.7E-23 T 14-10-2018 BD65_1967 0dfeab56ac5938f5ccd30472b1ca4cfd 330 SMART SM00354 1 68 2.4E-32 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_1967 0dfeab56ac5938f5ccd30472b1ca4cfd 330 SUPERFAMILY SSF53822 57 328 5.39E-89 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_1967 0dfeab56ac5938f5ccd30472b1ca4cfd 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 2.7E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_1967 0dfeab56ac5938f5ccd30472b1ca4cfd 330 SUPERFAMILY SSF47413 1 56 1.16E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_1967 0dfeab56ac5938f5ccd30472b1ca4cfd 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 14-10-2018 BD65_1967 0dfeab56ac5938f5ccd30472b1ca4cfd 330 Gene3D G3DSA:3.40.50.2300 66 319 2.9E-84 T 14-10-2018 BD65_1530 d0f936f6d4b8f959d83638a1bb201d8c 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 3.2E-18 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BD65_1530 d0f936f6d4b8f959d83638a1bb201d8c 136 PIRSF PIRSF006092 26 128 2.9E-24 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BD65_1530 d0f936f6d4b8f959d83638a1bb201d8c 136 Gene3D G3DSA:3.10.50.30 45 136 2.2E-31 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BD65_1530 d0f936f6d4b8f959d83638a1bb201d8c 136 Gene3D G3DSA:1.10.286.20 1 44 1.4E-24 T 14-10-2018 BD65_1530 d0f936f6d4b8f959d83638a1bb201d8c 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.771 T 14-10-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0070063 BD65_1530 d0f936f6d4b8f959d83638a1bb201d8c 136 SUPERFAMILY SSF54534 49 126 2.35E-18 T 14-10-2018 BD65_1530 d0f936f6d4b8f959d83638a1bb201d8c 136 Pfam PF14760 Rnk N-terminus 4 43 7.7E-13 T 14-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain BD65_749 6b0a2f378d8d5bbb468a10d0b46d2bb8 692 SUPERFAMILY SSF161098 140 405 8.94E-44 T 14-10-2018 IPR035906 MetI-like superfamily BD65_749 6b0a2f378d8d5bbb468a10d0b46d2bb8 692 SUPERFAMILY SSF161098 434 674 8.32E-44 T 14-10-2018 IPR035906 MetI-like superfamily BD65_749 6b0a2f378d8d5bbb468a10d0b46d2bb8 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 209 400 7.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_749 6b0a2f378d8d5bbb468a10d0b46d2bb8 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 501 677 3.0E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_749 6b0a2f378d8d5bbb468a10d0b46d2bb8 692 Gene3D G3DSA:1.10.3720.10 138 410 1.1E-51 T 14-10-2018 IPR035906 MetI-like superfamily BD65_749 6b0a2f378d8d5bbb468a10d0b46d2bb8 692 Gene3D G3DSA:1.10.3720.10 426 688 9.9E-45 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3080 1e8c649337e53816402555070359f85c 246 SMART SM00382 26 203 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3080 1e8c649337e53816402555070359f85c 246 Pfam PF00005 ABC transporter 18 152 5.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3080 1e8c649337e53816402555070359f85c 246 SUPERFAMILY SSF52540 2 219 5.53E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3080 1e8c649337e53816402555070359f85c 246 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_3080 1e8c649337e53816402555070359f85c 246 Gene3D G3DSA:3.40.50.300 1 244 6.4E-57 T 14-10-2018 BD65_897 7216102b80f4be7f6940231d55c11366 310 PIRSF PIRSF037167 2 307 4.9E-147 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BD65_897 7216102b80f4be7f6940231d55c11366 310 SUPERFAMILY SSF53335 15 293 7.12E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_897 7216102b80f4be7f6940231d55c11366 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 303 3.9E-100 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BD65_897 7216102b80f4be7f6940231d55c11366 310 Pfam PF05175 Methyltransferase small domain 132 216 2.6E-16 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BD65_897 7216102b80f4be7f6940231d55c11366 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 52.729 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BD65_897 7216102b80f4be7f6940231d55c11366 310 Gene3D G3DSA:3.40.50.150 109 276 9.4E-45 T 14-10-2018 BD65_897 7216102b80f4be7f6940231d55c11366 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.6E-135 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BD65_897 7216102b80f4be7f6940231d55c11366 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_1643 9592caacc759868c2799bf99e8baf65c 216 Pfam PF02581 Thiamine monophosphate synthase 23 191 7.8E-53 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BD65_1643 9592caacc759868c2799bf99e8baf65c 216 SUPERFAMILY SSF51391 5 209 4.97E-61 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BD65_1643 9592caacc759868c2799bf99e8baf65c 216 Gene3D G3DSA:3.20.20.70 8 212 1.1E-57 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1643 9592caacc759868c2799bf99e8baf65c 216 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 209 19.73 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BD65_1643 9592caacc759868c2799bf99e8baf65c 216 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 24 203 6.0E-54 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BD65_1088 e2d704c50818a0f6899bc24e86afef5b 191 Pfam PF08281 Sigma-70, region 4 130 180 6.2E-19 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_1088 e2d704c50818a0f6899bc24e86afef5b 191 Gene3D G3DSA:1.10.1740.10 1 120 1.5E-46 T 14-10-2018 BD65_1088 e2d704c50818a0f6899bc24e86afef5b 191 SUPERFAMILY SSF88659 122 183 2.24E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BD65_1088 e2d704c50818a0f6899bc24e86afef5b 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_1088 e2d704c50818a0f6899bc24e86afef5b 191 Pfam PF04542 Sigma-70 region 2 25 91 1.2E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BD65_1088 e2d704c50818a0f6899bc24e86afef5b 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 183 4.0E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BD65_1088 e2d704c50818a0f6899bc24e86afef5b 191 Gene3D G3DSA:1.10.10.10 121 191 5.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1088 e2d704c50818a0f6899bc24e86afef5b 191 SUPERFAMILY SSF88946 2 103 6.75E-30 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BD65_1088 e2d704c50818a0f6899bc24e86afef5b 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 9.0E-100 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_306 894e5e68ae0e22e14343cbe354916b64 108 PIRSF PIRSF037511 1 108 2.4E-33 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 BD65_306 894e5e68ae0e22e14343cbe354916b64 108 Pfam PF01253 Translation initiation factor SUI1 32 101 1.1E-17 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 BD65_306 894e5e68ae0e22e14343cbe354916b64 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 1.2E-37 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 BD65_306 894e5e68ae0e22e14343cbe354916b64 108 SUPERFAMILY SSF55159 5 104 1.96E-23 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 BD65_306 894e5e68ae0e22e14343cbe354916b64 108 Gene3D G3DSA:3.30.780.10 28 108 1.8E-32 T 14-10-2018 BD65_1391 a28a45f04c3570b14e69f8fa24aab8e1 96 Pfam PF04380 Membrane fusogenic activity 1 78 7.3E-28 T 14-10-2018 IPR007475 Membrane fusogenic activity BD65_1925 76f248988d6cccc49665b0404d5ba699 198 Gene3D G3DSA:1.10.357.10 9 198 7.2E-74 T 14-10-2018 BD65_1925 76f248988d6cccc49665b0404d5ba699 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 7.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_1925 76f248988d6cccc49665b0404d5ba699 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.885 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 BD65_1925 76f248988d6cccc49665b0404d5ba699 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BD65_1925 76f248988d6cccc49665b0404d5ba699 198 SUPERFAMILY SSF46689 10 73 6.98E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1925 76f248988d6cccc49665b0404d5ba699 198 SUPERFAMILY SSF48498 86 195 4.73E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BD65_2549 f1c3f16664b781249d90cbf623821cff 106 Pfam PF04999 Cell division protein FtsL 11 104 6.1E-34 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BD65_2549 f1c3f16664b781249d90cbf623821cff 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 103 9.7E-28 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BD65_2549 f1c3f16664b781249d90cbf623821cff 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 17.241 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BD65_291 9c473e1a7e89763482b3427cf409ea75 253 Gene3D G3DSA:3.40.50.720 1 252 8.5E-71 T 14-10-2018 BD65_291 9c473e1a7e89763482b3427cf409ea75 253 SUPERFAMILY SSF51735 10 242 8.42E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_291 9c473e1a7e89763482b3427cf409ea75 253 Pfam PF00106 short chain dehydrogenase 14 209 3.0E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_291 9c473e1a7e89763482b3427cf409ea75 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 0.0013 T 14-10-2018 BD65_291 9c473e1a7e89763482b3427cf409ea75 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_291 9c473e1a7e89763482b3427cf409ea75 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_291 9c473e1a7e89763482b3427cf409ea75 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_291 9c473e1a7e89763482b3427cf409ea75 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_291 9c473e1a7e89763482b3427cf409ea75 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_291 9c473e1a7e89763482b3427cf409ea75 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_291 9c473e1a7e89763482b3427cf409ea75 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BD65_2300 510dbfb1da3dae556da62cdb3dbd656f 141 Pfam PF02082 Transcriptional regulator 2 82 1.5E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type BD65_2300 510dbfb1da3dae556da62cdb3dbd656f 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site BD65_2300 510dbfb1da3dae556da62cdb3dbd656f 141 SUPERFAMILY SSF46785 2 130 1.58E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2300 510dbfb1da3dae556da62cdb3dbd656f 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 129 4.2E-37 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type BD65_2300 510dbfb1da3dae556da62cdb3dbd656f 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.93 T 14-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 BD65_2300 510dbfb1da3dae556da62cdb3dbd656f 141 Gene3D G3DSA:1.10.10.10 1 136 2.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_966 64162428ca4a41422eef841b0077b40d 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 1.4E-27 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BD65_966 64162428ca4a41422eef841b0077b40d 759 SMART SM00919 163 401 5.3E-139 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BD65_966 64162428ca4a41422eef841b0077b40d 759 SUPERFAMILY SSF53223 10 161 9.35E-53 T 14-10-2018 BD65_966 64162428ca4a41422eef841b0077b40d 759 Gene3D G3DSA:3.40.50.10380 1 160 7.2E-69 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BD65_966 64162428ca4a41422eef841b0077b40d 759 SUPERFAMILY SSF51735 163 453 2.83E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_966 64162428ca4a41422eef841b0077b40d 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 4.2E-17 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BD65_966 64162428ca4a41422eef841b0077b40d 759 Gene3D G3DSA:3.40.50.720 161 446 1.4E-81 T 14-10-2018 BD65_966 64162428ca4a41422eef841b0077b40d 759 SUPERFAMILY SSF53659 430 754 2.43E-91 T 14-10-2018 BD65_966 64162428ca4a41422eef841b0077b40d 759 PIRSF PIRSF036684 1 758 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 BD65_966 64162428ca4a41422eef841b0077b40d 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 1.2E-95 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BD65_966 64162428ca4a41422eef841b0077b40d 759 Gene3D G3DSA:3.40.50.10750 573 727 2.5E-92 T 14-10-2018 BD65_966 64162428ca4a41422eef841b0077b40d 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BD65_966 64162428ca4a41422eef841b0077b40d 759 SMART SM01274 18 151 1.2E-80 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BD65_966 64162428ca4a41422eef841b0077b40d 759 Gene3D G3DSA:3.40.50.10950 447 751 2.5E-92 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00369 268 291 8.4 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00369 61 83 68.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00369 199 221 0.39 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00369 222 244 5.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00369 156 176 31.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00369 130 153 0.038 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00369 107 129 0.015 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00369 245 267 0.11 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00369 84 106 0.47 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 Gene3D G3DSA:3.80.10.10 4 297 5.8E-79 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00364 107 126 0.27 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00364 245 264 34.0 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00364 153 172 32.0 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00364 222 241 36.0 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00364 199 218 190.0 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00364 130 149 18.0 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00364 268 287 25.0 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SUPERFAMILY SSF52058 17 288 2.62E-63 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 Pfam PF13855 Leucine rich repeat 178 235 9.5E-12 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 Pfam PF13855 Leucine rich repeat 105 143 5.1E-8 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 Pfam PF13855 Leucine rich repeat 40 97 1.2E-9 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 Pfam PF00560 Leucine Rich Repeat 271 285 0.99 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00365 153 184 740.0 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00365 245 270 26.0 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00365 84 102 140.0 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00365 199 220 620.0 T 14-10-2018 BD65_3095 47edebbf00e8491cdedfb3eda2cd4249 300 SMART SM00365 107 129 16.0 T 14-10-2018 BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 Pfam PF08447 PAS fold 290 374 1.5E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 SMART SM00091 20 86 2.4E-10 T 14-10-2018 IPR000014 PAS domain BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 SMART SM00091 266 332 2.8E-5 T 14-10-2018 IPR000014 PAS domain BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 SMART SM00091 144 209 0.34 T 14-10-2018 IPR000014 PAS domain BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 SUPERFAMILY SSF55785 254 377 1.8E-22 T 14-10-2018 IPR035965 PAS domain superfamily BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 SUPERFAMILY SSF55073 403 563 4.87E-45 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 Gene3D G3DSA:3.30.450.20 141 268 2.6E-18 T 14-10-2018 BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 Pfam PF08448 PAS fold 28 133 6.5E-12 T 14-10-2018 IPR013656 PAS fold-4 BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 Pfam PF08448 PAS fold 152 252 6.1E-9 T 14-10-2018 IPR013656 PAS fold-4 BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 SMART SM00086 93 135 0.063 T 14-10-2018 IPR001610 PAC motif BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 SMART SM00086 338 380 0.0015 T 14-10-2018 IPR001610 PAC motif BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 561 2.8E-45 T 14-10-2018 IPR000160 GGDEF domain BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 Gene3D G3DSA:3.30.450.20 269 377 6.4E-24 T 14-10-2018 BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 Gene3D G3DSA:3.30.450.20 16 135 7.5E-21 T 14-10-2018 BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 SMART SM00267 387 565 9.6E-58 T 14-10-2018 IPR000160 GGDEF domain BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 262 387 2.5E-15 T 14-10-2018 IPR000014 PAS domain BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 134 2.1E-17 T 14-10-2018 IPR000014 PAS domain BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 SUPERFAMILY SSF55785 9 133 3.67E-24 T 14-10-2018 IPR035965 PAS domain superfamily BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 SUPERFAMILY SSF55785 145 244 8.25E-11 T 14-10-2018 IPR035965 PAS domain superfamily BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 Gene3D G3DSA:3.30.70.270 384 566 1.1E-55 T 14-10-2018 BD65_524 4e22d793d8f45d67ca3bab7fb78caaaf 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 564 3.0E-49 T 14-10-2018 IPR000160 GGDEF domain BD65_622 6959be1b4873609b1c04e677b5356417 467 SUPERFAMILY SSF53383 8 451 1.19E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_622 6959be1b4873609b1c04e677b5356417 467 Gene3D G3DSA:3.40.640.10 67 359 3.5E-81 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_622 6959be1b4873609b1c04e677b5356417 467 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 270 291 - T 14-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 BD65_622 6959be1b4873609b1c04e677b5356417 467 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 34 384 2.8E-109 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BD65_622 6959be1b4873609b1c04e677b5356417 467 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 17 449 3.3E-204 T 14-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 BD65_622 6959be1b4873609b1c04e677b5356417 467 Gene3D G3DSA:3.90.1150.160 361 467 1.2E-35 T 14-10-2018 BD65_640 befa53e50411db376afc77e51d1d1779 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 481 4.2E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_640 befa53e50411db376afc77e51d1d1779 537 SMART SM00304 213 265 8.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_640 befa53e50411db376afc77e51d1d1779 537 SUPERFAMILY SSF58104 233 515 6.54E-74 T 14-10-2018 BD65_640 befa53e50411db376afc77e51d1d1779 537 Pfam PF02203 Tar ligand binding domain homologue 1 168 1.0E-18 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BD65_640 befa53e50411db376afc77e51d1d1779 537 SUPERFAMILY SSF47170 29 164 3.66E-6 T 14-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BD65_640 befa53e50411db376afc77e51d1d1779 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 4.8E-63 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_640 befa53e50411db376afc77e51d1d1779 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.8E-63 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_640 befa53e50411db376afc77e51d1d1779 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 4.8E-63 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_640 befa53e50411db376afc77e51d1d1779 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 4.8E-63 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_640 befa53e50411db376afc77e51d1d1779 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 4.8E-63 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_640 befa53e50411db376afc77e51d1d1779 537 Gene3D G3DSA:1.10.287.950 213 515 9.1E-89 T 14-10-2018 BD65_640 befa53e50411db376afc77e51d1d1779 537 SMART SM00283 266 513 1.6E-91 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_2707 99eab2445c2d7b549f732daecc4ab380 435 Gene3D G3DSA:1.20.1250.20 2 188 4.0E-12 T 14-10-2018 BD65_2707 99eab2445c2d7b549f732daecc4ab380 435 Pfam PF07690 Major Facilitator Superfamily 12 286 1.3E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2707 99eab2445c2d7b549f732daecc4ab380 435 Gene3D G3DSA:1.20.1250.20 201 381 3.9E-19 T 14-10-2018 BD65_2707 99eab2445c2d7b549f732daecc4ab380 435 SUPERFAMILY SSF103473 7 370 3.92E-38 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_364 8f1e859073289117d02aca31a84899cf 509 Gene3D G3DSA:3.40.50.720 3 365 5.2E-164 T 14-10-2018 BD65_364 8f1e859073289117d02aca31a84899cf 509 SMART SM01002 146 311 7.2E-86 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BD65_364 8f1e859073289117d02aca31a84899cf 509 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.5E-75 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BD65_364 8f1e859073289117d02aca31a84899cf 509 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 508 1.3E-292 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BD65_364 8f1e859073289117d02aca31a84899cf 509 SMART SM01003 4 137 1.6E-76 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BD65_364 8f1e859073289117d02aca31a84899cf 509 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.1E-52 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BD65_364 8f1e859073289117d02aca31a84899cf 509 PIRSF PIRSF000203 1 508 1.9E-279 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BD65_364 8f1e859073289117d02aca31a84899cf 509 Gene3D G3DSA:3.40.50.720 137 318 5.2E-164 T 14-10-2018 BD65_364 8f1e859073289117d02aca31a84899cf 509 SUPERFAMILY SSF52283 1 168 1.53E-57 T 14-10-2018 BD65_364 8f1e859073289117d02aca31a84899cf 509 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 BD65_364 8f1e859073289117d02aca31a84899cf 509 SUPERFAMILY SSF51735 137 316 1.32E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_364 8f1e859073289117d02aca31a84899cf 509 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 BD65_364 8f1e859073289117d02aca31a84899cf 509 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 426 508 5.3E-36 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BD65_2050 11210ccd809e5187c9a8ccc8af7d74ac 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 BD65_2050 11210ccd809e5187c9a8ccc8af7d74ac 195 Gene3D G3DSA:2.20.25.90 44 105 1.2E-16 T 14-10-2018 BD65_2050 11210ccd809e5187c9a8ccc8af7d74ac 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 1.1E-19 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_2050 11210ccd809e5187c9a8ccc8af7d74ac 195 Pfam PF00384 Molybdopterin oxidoreductase 107 145 1.2E-6 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_2050 11210ccd809e5187c9a8ccc8af7d74ac 195 SUPERFAMILY SSF53706 35 195 1.83E-57 T 14-10-2018 BD65_2050 11210ccd809e5187c9a8ccc8af7d74ac 195 SMART SM00926 43 104 1.9E-22 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_2050 11210ccd809e5187c9a8ccc8af7d74ac 195 Gene3D G3DSA:3.40.50.740 107 195 4.6E-35 T 14-10-2018 BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 9 1292 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 SMART SM00487 71 255 2.1E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 SMART SM00847 460 554 1.7E-36 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 Pfam PF00271 Helicase conserved C-terminal domain 282 399 3.6E-11 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 617 693 1.8E-18 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 SMART SM00490 300 400 1.3E-15 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 Pfam PF04408 Helicase associated domain (HA2) 462 552 5.0E-18 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 SUPERFAMILY SSF52540 70 600 1.31E-111 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 Gene3D G3DSA:3.40.50.300 31 248 4.3E-73 T 14-10-2018 BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 Gene3D G3DSA:1.20.120.1080 445 545 8.1E-20 T 14-10-2018 BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 SMART SM00382 88 380 5.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 Pfam PF00270 DEAD/DEAH box helicase 81 229 2.9E-6 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 Gene3D G3DSA:3.40.50.300 249 417 3.8E-56 T 14-10-2018 BD65_380 2a42a86fd790884e59f72dc1b8c23ec4 1295 Pfam PF11898 Domain of unknown function (DUF3418) 708 1292 4.2E-235 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 SUPERFAMILY SSF46785 675 772 2.01E-40 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 Pfam PF03288 Poxvirus D5 protein-like 675 772 1.1E-17 T 14-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 SUPERFAMILY SSF57783 32 95 2.38E-7 T 14-10-2018 BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 Pfam PF13362 Toprim domain 214 303 3.9E-8 T 14-10-2018 IPR006171 TOPRIM domain BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 SUPERFAMILY SSF52540 474 629 1.73E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 Gene3D G3DSA:3.40.50.300 459 638 4.8E-12 T 14-10-2018 BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 Gene3D G3DSA:1.10.10.10 674 773 4.6E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 SMART SM00885 339 466 1.1E-16 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 Pfam PF08706 D5 N terminal like 373 470 2.2E-7 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 SMART SM00778 32 68 7.8E-18 T 14-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 BD65_1114 c448d7af0c312858b9e52646ada96ed6 777 Pfam PF08273 Zinc-binding domain of primase-helicase 32 68 1.1E-17 T 14-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 Gene3D G3DSA:3.20.20.60 400 741 7.6E-100 T 14-10-2018 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 Pfam PF01590 GAF domain 18 152 2.1E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 1.4E-23 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 Gene3D G3DSA:3.50.30.10 175 399 1.3E-55 T 14-10-2018 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 730 1.6E-129 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 419 707 5.4E-101 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 SMART SM00065 17 164 3.4E-27 T 14-10-2018 IPR003018 GAF domain GO:0005515 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 Gene3D G3DSA:1.10.274.10 190 313 1.3E-55 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 SUPERFAMILY SSF51621 420 715 2.15E-93 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 SUPERFAMILY SSF55781 2 159 2.84E-30 T 14-10-2018 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 SUPERFAMILY SSF52009 293 413 1.09E-25 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 4.8E-16 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 SUPERFAMILY SSF47831 203 309 5.49E-26 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.6E-25 T 14-10-2018 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 7.6E-25 T 14-10-2018 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 7.6E-25 T 14-10-2018 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 7.6E-25 T 14-10-2018 BD65_1228 a0ca800be2f78d4750484e92afead7a9 748 Gene3D G3DSA:3.30.450.40 1 163 2.6E-44 T 14-10-2018 IPR029016 GAF-like domain superfamily BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 7.4E-25 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.707 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 Gene3D G3DSA:3.40.50.720 161 313 2.1E-43 T 14-10-2018 BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 1.0E-158 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 1.8E-48 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 SUPERFAMILY SSF69075 317 418 5.36E-28 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 SUPERFAMILY SSF51735 162 315 2.9E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 Gene3D G3DSA:3.30.460.30 1 158 1.1E-58 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 SUPERFAMILY SSF69742 1 158 8.89E-48 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.6E-49 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BD65_146 a73c02ed044d213f47e518b00f7b43d0 420 PIRSF PIRSF000445 1 420 3.6E-155 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BD65_902 826d56f6a57819ad694de646dea9dde6 98 Gene3D G3DSA:3.30.70.860 27 98 1.3E-27 T 14-10-2018 IPR035571 UPF0234-like, C-terminal BD65_902 826d56f6a57819ad694de646dea9dde6 98 Pfam PF04175 Protein of unknown function (DUF406) 8 98 1.3E-39 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 BD65_902 826d56f6a57819ad694de646dea9dde6 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 5 98 1.4E-40 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 BD65_1624 c106f28795c9540f9c272ed8e16a0ef2 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 1.9E-253 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BD65_1624 c106f28795c9540f9c272ed8e16a0ef2 532 Gene3D G3DSA:3.20.20.360 2 410 2.2E-191 T 14-10-2018 BD65_1624 c106f28795c9540f9c272ed8e16a0ef2 532 Gene3D G3DSA:1.20.1220.12 411 532 6.0E-51 T 14-10-2018 BD65_1624 c106f28795c9540f9c272ed8e16a0ef2 532 PIRSF PIRSF001363 2 532 1.8E-248 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BD65_1624 c106f28795c9540f9c272ed8e16a0ef2 532 SUPERFAMILY SSF51645 13 531 6.54E-189 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BD65_1624 c106f28795c9540f9c272ed8e16a0ef2 532 Pfam PF01274 Malate synthase 12 531 3.8E-207 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BD65_393 939182df2eadfb0dca31b1e648cf3d4e 327 Gene3D G3DSA:1.20.58.340 270 327 4.7E-11 T 14-10-2018 BD65_393 939182df2eadfb0dca31b1e648cf3d4e 327 Gene3D G3DSA:3.30.460.20 1 139 3.7E-42 T 14-10-2018 BD65_393 939182df2eadfb0dca31b1e648cf3d4e 327 Gene3D G3DSA:1.20.58.340 140 262 9.4E-42 T 14-10-2018 BD65_393 939182df2eadfb0dca31b1e648cf3d4e 327 SUPERFAMILY SSF143865 13 259 6.67E-51 T 14-10-2018 BD65_393 939182df2eadfb0dca31b1e648cf3d4e 327 SUPERFAMILY SSF144083 263 324 2.48E-13 T 14-10-2018 BD65_393 939182df2eadfb0dca31b1e648cf3d4e 327 Pfam PF01544 CorA-like Mg2+ transporter protein 38 323 1.0E-62 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 BD65_1020 cbc168ca3707bd434701a40a8815b198 152 SUPERFAMILY SSF89872 28 152 2.22E-46 T 14-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily BD65_1020 cbc168ca3707bd434701a40a8815b198 152 PIRSF PIRSF009103 3 152 5.3E-56 T 14-10-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 BD65_1020 cbc168ca3707bd434701a40a8815b198 152 Gene3D G3DSA:3.40.1420.10 24 152 4.7E-46 T 14-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily BD65_1020 cbc168ca3707bd434701a40a8815b198 152 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 35 150 1.8E-47 T 14-10-2018 BD65_2485 28e8512ba8db94a4732cb338635b8bca 639 SUPERFAMILY SSF48435 23 471 5.1E-134 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 BD65_2485 28e8512ba8db94a4732cb338635b8bca 639 Gene3D G3DSA:1.10.530.10 467 639 8.1E-53 T 14-10-2018 BD65_2485 28e8512ba8db94a4732cb338635b8bca 639 Pfam PF01464 Transglycosylase SLT domain 478 590 3.2E-33 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 BD65_2485 28e8512ba8db94a4732cb338635b8bca 639 Gene3D G3DSA:1.10.1240.20 397 466 1.1E-27 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 BD65_2485 28e8512ba8db94a4732cb338635b8bca 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BD65_2485 28e8512ba8db94a4732cb338635b8bca 639 SUPERFAMILY SSF53955 473 632 5.33E-51 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_2485 28e8512ba8db94a4732cb338635b8bca 639 Gene3D G3DSA:1.25.20.10 23 383 1.3E-118 T 14-10-2018 BD65_2485 28e8512ba8db94a4732cb338635b8bca 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 400 466 1.4E-25 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 BD65_2035 bfd87bc76618431ad7ac03b130a6d625 689 Pfam PF05746 DALR anticodon binding domain 582 679 1.0E-7 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BD65_2035 bfd87bc76618431ad7ac03b130a6d625 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.561 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2035 bfd87bc76618431ad7ac03b130a6d625 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 7.6E-211 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2035 bfd87bc76618431ad7ac03b130a6d625 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2035 bfd87bc76618431ad7ac03b130a6d625 689 SUPERFAMILY SSF109604 339 538 3.77E-16 T 14-10-2018 BD65_2035 bfd87bc76618431ad7ac03b130a6d625 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.8E-37 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2035 bfd87bc76618431ad7ac03b130a6d625 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.8E-37 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2035 bfd87bc76618431ad7ac03b130a6d625 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.8E-37 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2035 bfd87bc76618431ad7ac03b130a6d625 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.8E-37 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2035 bfd87bc76618431ad7ac03b130a6d625 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.8E-37 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_769 99ea17dd784bdedd00ec24802597b6ea 558 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 105 188 9.1E-40 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BD65_769 99ea17dd784bdedd00ec24802597b6ea 558 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 216 548 1.5E-144 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BD65_769 99ea17dd784bdedd00ec24802597b6ea 558 SUPERFAMILY SSF52794 103 203 1.71E-34 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BD65_769 99ea17dd784bdedd00ec24802597b6ea 558 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 106 187 4.3E-18 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BD65_769 99ea17dd784bdedd00ec24802597b6ea 558 SUPERFAMILY SSF52794 4 88 7.06E-9 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BD65_769 99ea17dd784bdedd00ec24802597b6ea 558 Gene3D G3DSA:3.40.50.2300 94 204 3.1E-38 T 14-10-2018 BD65_769 99ea17dd784bdedd00ec24802597b6ea 558 Pfam PF02378 Phosphotransferase system, EIIC 229 492 1.7E-16 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BD65_1733 ef11f4866ff78e6f581ea8eff9d4abdf 423 Gene3D G3DSA:3.50.50.60 1 114 3.7E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1733 ef11f4866ff78e6f581ea8eff9d4abdf 423 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 419 49.523 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 BD65_1733 ef11f4866ff78e6f581ea8eff9d4abdf 423 Pfam PF00890 FAD binding domain 4 403 5.5E-63 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_1733 ef11f4866ff78e6f581ea8eff9d4abdf 423 Gene3D G3DSA:3.50.50.60 246 419 3.1E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1733 ef11f4866ff78e6f581ea8eff9d4abdf 423 PIRSF PIRSF000141 1 422 5.5E-170 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 BD65_1733 ef11f4866ff78e6f581ea8eff9d4abdf 423 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 415 2.5E-177 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 BD65_1733 ef11f4866ff78e6f581ea8eff9d4abdf 423 SUPERFAMILY SSF51905 1 418 3.9E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2338 69554d2aa512d229762d0879d739589d 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.1E-43 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2338 69554d2aa512d229762d0879d739589d 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2338 69554d2aa512d229762d0879d739589d 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2338 69554d2aa512d229762d0879d739589d 85 SUPERFAMILY SSF110324 2 79 1.88E-34 T 14-10-2018 BD65_2338 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2338 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2338 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2338 69554d2aa512d229762d0879d739589d 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-30 T 14-10-2018 BD65_2338 69554d2aa512d229762d0879d739589d 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.288 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2338 69554d2aa512d229762d0879d739589d 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.0E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1856 7018f5947e54337c000456247d4dca29 300 SUPERFAMILY SSF161111 9 207 1.44E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BD65_1856 7018f5947e54337c000456247d4dca29 300 Gene3D G3DSA:3.30.70.1350 207 290 8.1E-34 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BD65_1856 7018f5947e54337c000456247d4dca29 300 SUPERFAMILY SSF160240 209 288 1.31E-25 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BD65_1856 7018f5947e54337c000456247d4dca29 300 Gene3D G3DSA:1.20.1510.10 8 206 1.4E-65 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BD65_1856 7018f5947e54337c000456247d4dca29 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 61.423 T 14-10-2018 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 BD65_1856 7018f5947e54337c000456247d4dca29 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 1.6E-25 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BD65_1856 7018f5947e54337c000456247d4dca29 300 Pfam PF01545 Cation efflux family 16 206 2.2E-43 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BD65_1856 7018f5947e54337c000456247d4dca29 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 288 5.6E-74 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BD65_1380 44444c6bb13e2c895716e18502a76938 303 Pfam PF03466 LysR substrate binding domain 91 292 1.2E-37 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1380 44444c6bb13e2c895716e18502a76938 303 SUPERFAMILY SSF53850 91 294 7.6E-39 T 14-10-2018 BD65_1380 44444c6bb13e2c895716e18502a76938 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1380 44444c6bb13e2c895716e18502a76938 303 Gene3D G3DSA:3.40.190.10 93 291 1.1E-59 T 14-10-2018 BD65_1380 44444c6bb13e2c895716e18502a76938 303 Gene3D G3DSA:1.10.10.10 3 88 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1380 44444c6bb13e2c895716e18502a76938 303 SUPERFAMILY SSF46785 3 112 1.3E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1380 44444c6bb13e2c895716e18502a76938 303 Gene3D G3DSA:3.40.190.10 164 264 1.1E-59 T 14-10-2018 BD65_561 85afe237188f9de8a2371262b7a4457e 511 Pfam PF03471 Transporter associated domain 429 507 2.4E-15 T 14-10-2018 IPR005170 Transporter-associated domain BD65_561 85afe237188f9de8a2371262b7a4457e 511 Pfam PF00571 CBS domain 365 415 6.0E-5 T 14-10-2018 IPR000644 CBS domain BD65_561 85afe237188f9de8a2371262b7a4457e 511 Gene3D G3DSA:3.30.465.10 433 507 1.7E-14 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BD65_561 85afe237188f9de8a2371262b7a4457e 511 SUPERFAMILY SSF56176 423 506 1.45E-15 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BD65_561 85afe237188f9de8a2371262b7a4457e 511 Pfam PF03741 Integral membrane protein TerC family 14 203 8.4E-48 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BD65_561 85afe237188f9de8a2371262b7a4457e 511 SUPERFAMILY SSF54631 284 418 1.26E-23 T 14-10-2018 BD65_561 85afe237188f9de8a2371262b7a4457e 511 SMART SM01091 427 508 6.4E-18 T 14-10-2018 IPR005170 Transporter-associated domain BD65_561 85afe237188f9de8a2371262b7a4457e 511 Gene3D G3DSA:3.10.580.10 277 432 1.9E-43 T 14-10-2018 BD65_2067 a1730fb3419da905ccc1be527dff3b76 487 Pfam PF12146 Serine aminopeptidase, S33 118 237 4.9E-9 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 BD65_2067 a1730fb3419da905ccc1be527dff3b76 487 SUPERFAMILY SSF53474 78 342 8.67E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_2067 a1730fb3419da905ccc1be527dff3b76 487 Gene3D G3DSA:3.40.50.1820 108 347 4.3E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_50 c314896f0988de546e8f417e35c3ce9b 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 1.5E-91 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_50 c314896f0988de546e8f417e35c3ce9b 320 Pfam PF00849 RNA pseudouridylate synthase 102 249 3.0E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_50 c314896f0988de546e8f417e35c3ce9b 320 SMART SM00363 20 80 7.5E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_50 c314896f0988de546e8f417e35c3ce9b 320 SUPERFAMILY SSF55120 95 312 1.92E-64 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_50 c314896f0988de546e8f417e35c3ce9b 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_50 c314896f0988de546e8f417e35c3ce9b 320 Gene3D G3DSA:3.30.2350.10 92 317 4.2E-84 T 14-10-2018 BD65_50 c314896f0988de546e8f417e35c3ce9b 320 Pfam PF01479 S4 domain 20 66 3.8E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_50 c314896f0988de546e8f417e35c3ce9b 320 SUPERFAMILY SSF55174 19 70 3.2E-8 T 14-10-2018 BD65_50 c314896f0988de546e8f417e35c3ce9b 320 Gene3D G3DSA:3.10.290.10 7 72 4.0E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BD65_3207 6bee750fe50933ad212369fafd3c93ae 242 SUPERFAMILY SSF52540 3 233 1.01E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3207 6bee750fe50933ad212369fafd3c93ae 242 Pfam PF00005 ABC transporter 20 170 5.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3207 6bee750fe50933ad212369fafd3c93ae 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_3207 6bee750fe50933ad212369fafd3c93ae 242 PIRSF PIRSF039085 1 242 2.8E-83 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BD65_3207 6bee750fe50933ad212369fafd3c93ae 242 SMART SM00382 27 218 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3207 6bee750fe50933ad212369fafd3c93ae 242 Gene3D G3DSA:3.40.50.300 1 241 6.3E-70 T 14-10-2018 BD65_281 1961d64f63f01e263c3a57ef0f621f30 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.0E-104 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BD65_281 1961d64f63f01e263c3a57ef0f621f30 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.995 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BD65_281 1961d64f63f01e263c3a57ef0f621f30 268 SUPERFAMILY SSF51366 1 266 7.16E-91 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BD65_281 1961d64f63f01e263c3a57ef0f621f30 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BD65_281 1961d64f63f01e263c3a57ef0f621f30 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 8.4E-97 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BD65_281 1961d64f63f01e263c3a57ef0f621f30 268 Gene3D G3DSA:3.20.20.70 1 268 2.4E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_877 ac9bc93bbec9c3fee71456398f9592aa 277 SUPERFAMILY SSF55120 17 272 8.78E-90 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_877 ac9bc93bbec9c3fee71456398f9592aa 277 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 16 258 34.707 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_877 ac9bc93bbec9c3fee71456398f9592aa 277 Gene3D G3DSA:3.30.70.660 120 257 2.5E-50 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 BD65_877 ac9bc93bbec9c3fee71456398f9592aa 277 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 17 253 5.3E-77 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_877 ac9bc93bbec9c3fee71456398f9592aa 277 PIRSF PIRSF001430 16 267 4.9E-77 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_877 ac9bc93bbec9c3fee71456398f9592aa 277 Gene3D G3DSA:3.30.70.580 14 119 1.0E-38 T 14-10-2018 BD65_877 ac9bc93bbec9c3fee71456398f9592aa 277 Pfam PF01416 tRNA pseudouridine synthase 23 117 2.5E-9 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_877 ac9bc93bbec9c3fee71456398f9592aa 277 Pfam PF01416 tRNA pseudouridine synthase 157 259 4.3E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 338 417 2.4E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 Gene3D G3DSA:3.40.50.720 20 107 3.7E-34 T 14-10-2018 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 Gene3D G3DSA:3.90.190.20 323 491 7.0E-52 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 SUPERFAMILY SSF53244 323 476 3.66E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 SUPERFAMILY SSF51984 20 106 9.16E-29 T 14-10-2018 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 1.7E-184 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 Pfam PF01225 Mur ligase family, catalytic domain 21 119 8.9E-30 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.724 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 SUPERFAMILY SSF53623 105 322 1.83E-74 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 Pfam PF08245 Mur ligase middle domain 124 304 1.3E-26 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BD65_2557 77a1cce2ce73f498831610dc1fe040a2 491 Gene3D G3DSA:3.40.1190.10 108 322 1.8E-88 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_2594 c43fd6e0d15177f77ab5a475783ae982 256 Pfam PF01061 ABC-2 type transporter 9 218 1.1E-36 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BD65_2594 c43fd6e0d15177f77ab5a475783ae982 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.5E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BD65_2594 c43fd6e0d15177f77ab5a475783ae982 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.5E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BD65_2594 c43fd6e0d15177f77ab5a475783ae982 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.5E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BD65_2594 c43fd6e0d15177f77ab5a475783ae982 256 PIRSF PIRSF006648 9 253 2.2E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BD65_1001 c220795b8a36c99b43dd70bf3437569f 729 Gene3D G3DSA:1.10.3720.10 495 722 2.9E-21 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1001 c220795b8a36c99b43dd70bf3437569f 729 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 447 716 1.2E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1001 c220795b8a36c99b43dd70bf3437569f 729 SUPERFAMILY SSF161098 495 711 1.7E-20 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1001 c220795b8a36c99b43dd70bf3437569f 729 SUPERFAMILY SSF69322 159 369 2.75E-9 T 14-10-2018 BD65_1001 c220795b8a36c99b43dd70bf3437569f 729 SUPERFAMILY SSF161098 417 498 3.4E-6 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3136 f454929605380402c462baf500f210ec 374 SMART SM00829 13 370 1.5E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BD65_3136 f454929605380402c462baf500f210ec 374 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 129 1.3E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BD65_3136 f454929605380402c462baf500f210ec 374 SUPERFAMILY SSF50129 2 189 7.76E-75 T 14-10-2018 IPR011032 GroES-like superfamily BD65_3136 f454929605380402c462baf500f210ec 374 Pfam PF00107 Zinc-binding dehydrogenase 200 325 1.7E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BD65_3136 f454929605380402c462baf500f210ec 374 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BD65_3136 f454929605380402c462baf500f210ec 374 Gene3D G3DSA:3.40.50.720 177 315 6.6E-156 T 14-10-2018 BD65_3136 f454929605380402c462baf500f210ec 374 Gene3D G3DSA:3.90.180.10 9 367 6.6E-156 T 14-10-2018 BD65_3136 f454929605380402c462baf500f210ec 374 SUPERFAMILY SSF50129 321 372 4.47E-13 T 14-10-2018 IPR011032 GroES-like superfamily BD65_3136 f454929605380402c462baf500f210ec 374 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 1.3E-225 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 BD65_3136 f454929605380402c462baf500f210ec 374 SUPERFAMILY SSF51735 163 337 4.59E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_411 2fcad3e577070f777a9b15e01030b8ae 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 2.1E-43 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_411 2fcad3e577070f777a9b15e01030b8ae 321 SUPERFAMILY SSF161098 69 300 8.9E-23 T 14-10-2018 IPR035906 MetI-like superfamily BD65_235 008e6605786aa6d68273448b12796387 639 Gene3D G3DSA:1.10.460.10 162 602 1.7E-175 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BD65_235 008e6605786aa6d68273448b12796387 639 Pfam PF01751 Toprim domain 2 135 5.2E-17 T 14-10-2018 IPR006171 TOPRIM domain BD65_235 008e6605786aa6d68273448b12796387 639 SMART SM00493 1 124 1.1E-30 T 14-10-2018 IPR006171 TOPRIM domain BD65_235 008e6605786aa6d68273448b12796387 639 SMART SM00437 280 558 1.2E-105 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BD65_235 008e6605786aa6d68273448b12796387 639 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 623 2.7E-277 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BD65_235 008e6605786aa6d68273448b12796387 639 Pfam PF01131 DNA topoisomerase 158 593 3.5E-113 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_235 008e6605786aa6d68273448b12796387 639 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 639 66.002 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BD65_235 008e6605786aa6d68273448b12796387 639 SMART SM00436 128 223 1.4E-37 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BD65_235 008e6605786aa6d68273448b12796387 639 Gene3D G3DSA:3.40.50.140 1 156 1.2E-63 T 14-10-2018 BD65_235 008e6605786aa6d68273448b12796387 639 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BD65_235 008e6605786aa6d68273448b12796387 639 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 6.1E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_235 008e6605786aa6d68273448b12796387 639 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 6.1E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_235 008e6605786aa6d68273448b12796387 639 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 6.1E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_235 008e6605786aa6d68273448b12796387 639 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 6.1E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_235 008e6605786aa6d68273448b12796387 639 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 6.1E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_235 008e6605786aa6d68273448b12796387 639 Gene3D G3DSA:2.70.20.10 217 488 1.7E-175 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BD65_235 008e6605786aa6d68273448b12796387 639 Gene3D G3DSA:1.10.290.10 289 416 1.7E-175 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BD65_235 008e6605786aa6d68273448b12796387 639 SUPERFAMILY SSF56712 1 608 2.35E-189 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 Gene3D G3DSA:3.40.190.10 135 228 9.3E-44 T 14-10-2018 BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 SMART SM00062 49 268 0.0025 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 428 544 8.0E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 Gene3D G3DSA:3.40.50.2300 654 786 3.5E-20 T 14-10-2018 BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 2.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 544 2.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 525 2.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 Pfam PF00072 Response regulator receiver domain 672 779 6.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 SUPERFAMILY SSF52172 667 787 7.68E-20 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 Gene3D G3DSA:3.30.565.10 382 548 1.7E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 Gene3D G3DSA:1.10.287.130 298 381 7.4E-6 T 14-10-2018 BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 SUPERFAMILY SSF55874 371 548 6.55E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 SMART SM00387 427 547 9.3E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 266 2.5E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 Gene3D G3DSA:3.40.190.10 40 265 9.3E-44 T 14-10-2018 BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 SMART SM00448 669 784 1.8E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 SUPERFAMILY SSF47384 300 379 1.51E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_2653 fc16a5bb294e8e6e33e07f7f35cc1ae1 793 SUPERFAMILY SSF53850 44 265 1.44E-25 T 14-10-2018 BD65_564 2bb24d876fed96ae8fa2b9582a2fa435 282 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 11 280 7.6E-112 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 BD65_564 2bb24d876fed96ae8fa2b9582a2fa435 282 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 10 280 1.2E-141 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 BD65_1825 dd5f665facdbf64d7328361f4d554445 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BD65_1825 dd5f665facdbf64d7328361f4d554445 334 Gene3D G3DSA:3.40.50.720 6 330 1.0E-126 T 14-10-2018 BD65_1825 dd5f665facdbf64d7328361f4d554445 334 Gene3D G3DSA:3.30.360.10 153 312 1.0E-126 T 14-10-2018 BD65_1825 dd5f665facdbf64d7328361f4d554445 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 39.521 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BD65_1825 dd5f665facdbf64d7328361f4d554445 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 1.3E-33 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BD65_1825 dd5f665facdbf64d7328361f4d554445 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 2.1E-125 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BD65_1825 dd5f665facdbf64d7328361f4d554445 334 SUPERFAMILY SSF51735 2 183 1.21E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1825 dd5f665facdbf64d7328361f4d554445 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 2.5E-14 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BD65_1825 dd5f665facdbf64d7328361f4d554445 334 SMART SM00859 3 146 7.5E-51 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BD65_1825 dd5f665facdbf64d7328361f4d554445 334 SUPERFAMILY SSF55347 154 308 3.38E-49 T 14-10-2018 BD65_594 66ae879033c16e500ae7417c3ab8a63a 572 SUPERFAMILY SSF52540 322 569 6.55E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_594 66ae879033c16e500ae7417c3ab8a63a 572 Gene3D G3DSA:3.40.50.300 329 571 1.9E-93 T 14-10-2018 BD65_594 66ae879033c16e500ae7417c3ab8a63a 572 Gene3D G3DSA:1.20.1560.10 1 320 1.5E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_594 66ae879033c16e500ae7417c3ab8a63a 572 Pfam PF00005 ABC transporter 350 498 2.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_594 66ae879033c16e500ae7417c3ab8a63a 572 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_594 66ae879033c16e500ae7417c3ab8a63a 572 Pfam PF00664 ABC transporter transmembrane region 18 287 1.1E-52 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BD65_594 66ae879033c16e500ae7417c3ab8a63a 572 SUPERFAMILY SSF90123 3 319 2.09E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_594 66ae879033c16e500ae7417c3ab8a63a 572 SMART SM00382 358 544 3.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 SUPERFAMILY SSF47384 232 313 3.53E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 471 1.6E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 SUPERFAMILY SSF55874 321 470 6.16E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 Gene3D G3DSA:3.30.565.10 312 471 7.4E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 SMART SM00388 249 317 1.5E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 313 1.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 Gene3D G3DSA:1.10.287.130 193 311 1.7E-17 T 14-10-2018 BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 2.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 2.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 2.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1068 4c23a3e43166235a418c20ccff62c16a 475 SMART SM00387 360 472 5.2E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_552 83f1aaba304edc37311a7658ec83db23 102 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 1 102 30.897 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 BD65_552 83f1aaba304edc37311a7658ec83db23 102 PIRSF PIRSF029143 1 102 4.3E-47 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 BD65_552 83f1aaba304edc37311a7658ec83db23 102 Pfam PF04266 ASCH domain 5 93 1.8E-14 T 14-10-2018 IPR007374 ASCH domain BD65_552 83f1aaba304edc37311a7658ec83db23 102 Gene3D G3DSA:2.30.130.30 1 102 1.5E-42 T 14-10-2018 BD65_552 83f1aaba304edc37311a7658ec83db23 102 SMART SM01022 5 101 5.5E-26 T 14-10-2018 IPR007374 ASCH domain BD65_552 83f1aaba304edc37311a7658ec83db23 102 SUPERFAMILY SSF88697 2 100 1.56E-32 T 14-10-2018 IPR015947 PUA-like superfamily BD65_2841 976cb80a1ff2317c45a962a0e1687875 273 SUPERFAMILY SSF56784 1 262 1.28E-60 T 14-10-2018 IPR036412 HAD-like superfamily BD65_2841 976cb80a1ff2317c45a962a0e1687875 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 BD65_2841 976cb80a1ff2317c45a962a0e1687875 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 14-10-2018 BD65_2841 976cb80a1ff2317c45a962a0e1687875 273 Gene3D G3DSA:3.40.50.1000 6 254 6.7E-55 T 14-10-2018 IPR023214 HAD superfamily BD65_2841 976cb80a1ff2317c45a962a0e1687875 273 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 273 60.994 T 14-10-2018 IPR023938 HMP-PP phosphatase GO:0016818 BD65_2841 976cb80a1ff2317c45a962a0e1687875 273 Gene3D G3DSA:3.30.1240.10 82 184 6.7E-55 T 14-10-2018 BD65_2841 976cb80a1ff2317c45a962a0e1687875 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 2.5E-53 T 14-10-2018 BD65_2841 976cb80a1ff2317c45a962a0e1687875 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 4.3E-34 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BD65_2841 976cb80a1ff2317c45a962a0e1687875 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 4.4E-54 T 14-10-2018 IPR000150 Cof family GO:0016787 BD65_736 7a311e68b9cbcce010d9f73d1841fdd3 487 PIRSF PIRSF002457 1 487 4.4E-153 T 14-10-2018 IPR030676 Citrate carrier CitT-related BD65_736 7a311e68b9cbcce010d9f73d1841fdd3 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 484 3.9E-169 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BD65_736 7a311e68b9cbcce010d9f73d1841fdd3 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 480 4.7E-161 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BD65_323 360eba5d275c1a333a6367107e6b6fdf 581 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 581 40.621 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BD65_323 360eba5d275c1a333a6367107e6b6fdf 581 Pfam PF01268 Formate--tetrahydrofolate ligase 18 580 1.3E-228 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BD65_323 360eba5d275c1a333a6367107e6b6fdf 581 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BD65_323 360eba5d275c1a333a6367107e6b6fdf 581 Gene3D G3DSA:3.40.50.300 18 459 4.8E-182 T 14-10-2018 BD65_323 360eba5d275c1a333a6367107e6b6fdf 581 Gene3D G3DSA:3.30.1510.10 133 264 4.8E-182 T 14-10-2018 BD65_323 360eba5d275c1a333a6367107e6b6fdf 581 Gene3D G3DSA:3.10.410.10 469 557 7.1E-27 T 14-10-2018 BD65_323 360eba5d275c1a333a6367107e6b6fdf 581 SUPERFAMILY SSF52540 19 579 4.07E-208 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2038 7076f46221386b456274183fe680f7ed 799 Gene3D G3DSA:2.60.40.2610 620 710 1.7E-10 T 14-10-2018 BD65_2038 7076f46221386b456274183fe680f7ed 799 Pfam PF13953 PapC C-terminal domain 717 772 4.0E-10 T 14-10-2018 IPR025949 PapC-like, C-terminal domain BD65_2038 7076f46221386b456274183fe680f7ed 799 Gene3D G3DSA:2.60.40.3110 240 329 3.6E-8 T 14-10-2018 BD65_2038 7076f46221386b456274183fe680f7ed 799 Pfam PF00577 Outer membrane usher protein 219 693 1.3E-36 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BD65_2038 7076f46221386b456274183fe680f7ed 799 Gene3D G3DSA:2.60.40.2070 716 791 2.2E-5 T 14-10-2018 BD65_2212 b809f598f80073bab3bc75627b009ce4 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-45 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 BD65_2212 b809f598f80073bab3bc75627b009ce4 92 Gene3D G3DSA:3.30.860.10 1 92 3.9E-43 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2212 b809f598f80073bab3bc75627b009ce4 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2212 b809f598f80073bab3bc75627b009ce4 92 Pfam PF00203 Ribosomal protein S19 3 83 1.3E-35 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2212 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.5E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2212 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.5E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2212 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.5E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2212 b809f598f80073bab3bc75627b009ce4 92 PIRSF PIRSF002144 1 92 1.8E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2212 b809f598f80073bab3bc75627b009ce4 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.571 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2212 b809f598f80073bab3bc75627b009ce4 92 SUPERFAMILY SSF54570 3 84 5.75E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_1571 35aa0d9d8ca6f783633ddd3301f70cad 183 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.47 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BD65_1571 35aa0d9d8ca6f783633ddd3301f70cad 183 SUPERFAMILY SSF50249 4 183 2.95E-63 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_1571 35aa0d9d8ca6f783633ddd3301f70cad 183 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 183 2.4E-62 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BD65_1571 35aa0d9d8ca6f783633ddd3301f70cad 183 Gene3D G3DSA:2.40.50.140 2 149 3.2E-53 T 14-10-2018 BD65_1571 35aa0d9d8ca6f783633ddd3301f70cad 183 Pfam PF00436 Single-strand binding protein family 6 112 7.5E-44 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BD65_1571 35aa0d9d8ca6f783633ddd3301f70cad 183 PIRSF PIRSF002070 2 172 1.5E-40 T 14-10-2018 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 Gene3D G3DSA:3.40.50.10380 18 268 5.4E-115 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 SMART SM00919 271 531 3.7E-133 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 3.3E-102 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 PRINTS PR00072 Malic enzyme signature 242 260 9.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 PRINTS PR00072 Malic enzyme signature 408 424 9.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 PRINTS PR00072 Malic enzyme signature 147 176 9.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 PRINTS PR00072 Malic enzyme signature 183 205 9.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 PRINTS PR00072 Malic enzyme signature 267 283 9.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 PRINTS PR00072 Malic enzyme signature 87 111 9.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 PRINTS PR00072 Malic enzyme signature 298 314 9.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 SUPERFAMILY SSF51735 271 562 8.37E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_3147 dc9a1500dac040343a219c1482b75f66 565 SUPERFAMILY SSF53223 6 270 7.19E-111 T 14-10-2018 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.296 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 4.3E-79 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 Gene3D G3DSA:3.40.50.720 269 565 6.7E-108 T 14-10-2018 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 SMART SM01274 81 261 6.1E-110 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BD65_3147 dc9a1500dac040343a219c1482b75f66 565 PIRSF PIRSF000106 3 563 2.6E-228 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 SUPERFAMILY SSF47336 1036 1089 2.49E-11 T 14-10-2018 IPR036736 ACP-like superfamily BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 SUPERFAMILY SSF52777 247 498 2.33E-32 T 14-10-2018 BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 Pfam PF00501 AMP-binding enzyme 533 925 2.3E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 Pfam PF00668 Condensation domain 102 512 8.0E-27 T 14-10-2018 IPR001242 Condensation domain BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 552 949 2.8E-119 T 14-10-2018 IPR010071 Amino acid adenylation domain BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 ProSitePatterns PS00455 Putative AMP-binding domain signature. 669 680 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 Gene3D G3DSA:3.30.300.30 920 1029 2.6E-33 T 14-10-2018 BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 Gene3D G3DSA:1.10.1200.10 1030 1115 1.1E-14 T 14-10-2018 IPR036736 ACP-like superfamily BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 Pfam PF00550 Phosphopantetheine attachment site 1043 1091 8.3E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 SUPERFAMILY SSF52777 63 258 3.22E-12 T 14-10-2018 BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 PRINTS PR00154 AMP-binding signature 664 675 6.5E-5 T 14-10-2018 IPR020459 AMP-binding BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 PRINTS PR00154 AMP-binding signature 676 684 6.5E-5 T 14-10-2018 IPR020459 AMP-binding BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 Gene3D G3DSA:3.30.559.10 60 243 1.4E-35 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 Gene3D G3DSA:3.40.50.12780 523 918 3.4E-109 T 14-10-2018 BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 SUPERFAMILY SSF56801 503 1052 7.98E-142 T 14-10-2018 BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 Gene3D G3DSA:3.30.559.30 245 504 2.2E-61 T 14-10-2018 BD65_573 7bf465a1b5bc0d4572589d3ea81c1a0a 1123 Pfam PF13193 AMP-binding enzyme C-terminal domain 934 1014 3.7E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BD65_672 fb2227886c3525b5a09bffaac4f1ee18 962 SMART SM00471 590 900 6.1E-5 T 14-10-2018 IPR003607 HD/PDEase domain BD65_672 fb2227886c3525b5a09bffaac4f1ee18 962 SUPERFAMILY SSF109604 586 697 6.28E-8 T 14-10-2018 BD65_672 fb2227886c3525b5a09bffaac4f1ee18 962 Gene3D G3DSA:3.30.450.20 140 229 7.8E-12 T 14-10-2018 BD65_672 fb2227886c3525b5a09bffaac4f1ee18 962 Pfam PF13487 HD domain 817 882 2.5E-22 T 14-10-2018 BD65_672 fb2227886c3525b5a09bffaac4f1ee18 962 Gene3D G3DSA:1.20.1480.50 323 412 3.7E-5 T 14-10-2018 BD65_672 fb2227886c3525b5a09bffaac4f1ee18 962 Pfam PF02743 Cache domain 86 318 1.2E-15 T 14-10-2018 IPR033479 Double Cache domain 1 BD65_672 fb2227886c3525b5a09bffaac4f1ee18 962 Gene3D G3DSA:1.10.3210.10 808 941 1.0E-24 T 14-10-2018 BD65_672 fb2227886c3525b5a09bffaac4f1ee18 962 Gene3D G3DSA:1.10.3210.10 570 689 1.5E-17 T 14-10-2018 BD65_672 fb2227886c3525b5a09bffaac4f1ee18 962 SUPERFAMILY SSF103190 144 239 1.41E-8 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BD65_672 fb2227886c3525b5a09bffaac4f1ee18 962 SUPERFAMILY SSF109604 813 917 1.35E-6 T 14-10-2018 BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 Pfam PF00248 Aldo/keto reductase family 18 192 3.2E-36 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 Pfam PF00248 Aldo/keto reductase family 202 261 4.5E-9 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 PRINTS PR00069 Aldo-keto reductase signature 123 140 3.5E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 PRINTS PR00069 Aldo-keto reductase signature 157 186 3.5E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 PRINTS PR00069 Aldo-keto reductase signature 37 61 3.5E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 PRINTS PR00069 Aldo-keto reductase signature 91 109 3.5E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 PRINTS PR00069 Aldo-keto reductase signature 196 220 3.5E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 SUPERFAMILY SSF51430 7 267 8.38E-87 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 Gene3D G3DSA:3.20.20.100 1 273 5.9E-115 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 PIRSF PIRSF000097 1 115 2.4E-42 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BD65_1374 f505a4c84f510339bb0a6b230d8f29ed 273 PIRSF PIRSF000097 110 269 1.1E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 PIRSF PIRSF000148 1 368 3.6E-68 T 14-10-2018 BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 Gene3D G3DSA:3.30.360.10 135 350 1.3E-149 T 14-10-2018 BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 Gene3D G3DSA:3.40.50.720 4 356 1.3E-149 T 14-10-2018 BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 3.7E-215 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 2.9E-57 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 34.007 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 3.8E-24 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 SUPERFAMILY SSF51735 1 147 1.3E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 SUPERFAMILY SSF55347 134 354 2.58E-78 T 14-10-2018 BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_2115 6e2406fce4a19c2fa03e205d69055207 368 SMART SM00859 3 122 2.5E-24 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BD65_880 df53cd0ddf77dddb94ddfeb6340b1b5b 257 Gene3D G3DSA:1.10.10.60 157 257 1.7E-22 T 14-10-2018 BD65_880 df53cd0ddf77dddb94ddfeb6340b1b5b 257 Pfam PF07883 Cupin domain 27 87 1.6E-6 T 14-10-2018 IPR013096 Cupin 2, conserved barrel BD65_880 df53cd0ddf77dddb94ddfeb6340b1b5b 257 Gene3D G3DSA:2.60.120.10 14 92 2.3E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_880 df53cd0ddf77dddb94ddfeb6340b1b5b 257 SUPERFAMILY SSF51182 14 88 1.02E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BD65_880 df53cd0ddf77dddb94ddfeb6340b1b5b 257 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 250 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BD65_880 df53cd0ddf77dddb94ddfeb6340b1b5b 257 SMART SM00342 172 254 1.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_880 df53cd0ddf77dddb94ddfeb6340b1b5b 257 Pfam PF12833 Helix-turn-helix domain 178 255 4.5E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_880 df53cd0ddf77dddb94ddfeb6340b1b5b 257 SUPERFAMILY SSF46689 208 256 1.08E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_880 df53cd0ddf77dddb94ddfeb6340b1b5b 257 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 2.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_880 df53cd0ddf77dddb94ddfeb6340b1b5b 257 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 2.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_1908 234ee975c481917a325c2b2fb3140df1 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 49.877 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_1908 234ee975c481917a325c2b2fb3140df1 515 Gene3D G3DSA:3.40.720.10 7 511 5.4E-215 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BD65_1908 234ee975c481917a325c2b2fb3140df1 515 SUPERFAMILY SSF64158 79 311 6.41E-85 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_1908 234ee975c481917a325c2b2fb3140df1 515 PIRSF PIRSF001492 1 515 2.2E-203 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_1908 234ee975c481917a325c2b2fb3140df1 515 Pfam PF01676 Metalloenzyme superfamily 6 501 4.4E-81 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BD65_1908 234ee975c481917a325c2b2fb3140df1 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 2.8E-236 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_1908 234ee975c481917a325c2b2fb3140df1 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 300 5.6E-82 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_1908 234ee975c481917a325c2b2fb3140df1 515 Gene3D G3DSA:3.40.1450.10 79 313 5.4E-215 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_1908 234ee975c481917a325c2b2fb3140df1 515 SUPERFAMILY SSF53649 5 511 5.23E-73 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 SMART SM00354 4 74 1.5E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 SUPERFAMILY SSF47413 4 60 2.67E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 Pfam PF13377 Periplasmic binding protein-like domain 168 314 1.8E-16 T 14-10-2018 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 SUPERFAMILY SSF53822 63 314 3.26E-61 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_1526 8c1b2ba169620801589860e6d40db39d 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 1.2E-150 T 14-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 Gene3D G3DSA:3.40.50.2300 68 301 5.3E-67 T 14-10-2018 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 Gene3D G3DSA:1.10.260.40 1 61 6.4E-21 T 14-10-2018 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 Gene3D G3DSA:3.40.50.2300 163 279 5.3E-67 T 14-10-2018 BD65_1526 8c1b2ba169620801589860e6d40db39d 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 8.7E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_3181 ef3dc9095c5577319e838e95689ab283 229 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 2.1E-46 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like BD65_3181 ef3dc9095c5577319e838e95689ab283 229 SUPERFAMILY SSF56784 1 205 4.75E-27 T 14-10-2018 IPR036412 HAD-like superfamily BD65_3181 ef3dc9095c5577319e838e95689ab283 229 Gene3D G3DSA:3.40.50.1000 3 214 3.7E-64 T 14-10-2018 IPR023214 HAD superfamily BD65_3181 ef3dc9095c5577319e838e95689ab283 229 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 5.6E-25 T 14-10-2018 BD65_3181 ef3dc9095c5577319e838e95689ab283 229 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 8.8E-37 T 14-10-2018 BD65_3181 ef3dc9095c5577319e838e95689ab283 229 Gene3D G3DSA:1.20.1440.100 15 87 3.7E-64 T 14-10-2018 BD65_2533 423d3bdd18048316ec62ef6a37ec763c 332 Gene3D G3DSA:3.40.190.10 128 327 8.3E-119 T 14-10-2018 BD65_2533 423d3bdd18048316ec62ef6a37ec763c 332 SUPERFAMILY SSF53850 26 327 1.26E-65 T 14-10-2018 BD65_2533 423d3bdd18048316ec62ef6a37ec763c 332 Gene3D G3DSA:3.40.190.10 28 302 8.3E-119 T 14-10-2018 BD65_2533 423d3bdd18048316ec62ef6a37ec763c 332 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 23 326 2.9E-143 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 BD65_2533 423d3bdd18048316ec62ef6a37ec763c 332 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 10 331 6.2E-161 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 BD65_2533 423d3bdd18048316ec62ef6a37ec763c 332 Pfam PF01547 Bacterial extracellular solute-binding protein 46 277 7.3E-17 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BD65_1209 5995a1d8b83ec792daa833cef702fcdf 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1209 5995a1d8b83ec792daa833cef702fcdf 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1209 5995a1d8b83ec792daa833cef702fcdf 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1209 5995a1d8b83ec792daa833cef702fcdf 305 SUPERFAMILY SSF46785 3 87 2.01E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1209 5995a1d8b83ec792daa833cef702fcdf 305 SUPERFAMILY SSF53850 93 296 4.5E-39 T 14-10-2018 BD65_1209 5995a1d8b83ec792daa833cef702fcdf 305 Gene3D G3DSA:3.40.190.10 163 262 4.0E-59 T 14-10-2018 BD65_1209 5995a1d8b83ec792daa833cef702fcdf 305 Pfam PF03466 LysR substrate binding domain 91 292 1.9E-38 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1209 5995a1d8b83ec792daa833cef702fcdf 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.3E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1209 5995a1d8b83ec792daa833cef702fcdf 305 Gene3D G3DSA:1.10.10.10 7 94 4.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1209 5995a1d8b83ec792daa833cef702fcdf 305 Gene3D G3DSA:3.40.190.10 103 288 4.0E-59 T 14-10-2018 BD65_2839 58861ad780fac9e6b5de53f488569c1f 232 Gene3D G3DSA:3.40.50.620 1 232 3.5E-84 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2839 58861ad780fac9e6b5de53f488569c1f 232 SUPERFAMILY SSF52402 1 215 1.92E-68 T 14-10-2018 BD65_2839 58861ad780fac9e6b5de53f488569c1f 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 214 1.9E-83 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BD65_2839 58861ad780fac9e6b5de53f488569c1f 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 220 50.747 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BD65_2839 58861ad780fac9e6b5de53f488569c1f 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 207 1.8E-84 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BD65_2839 58861ad780fac9e6b5de53f488569c1f 232 PIRSF PIRSF006293 1 226 1.1E-85 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BD65_1376 503c140d393e87e8fdb7b627321d5a7f 477 Gene3D G3DSA:2.60.40.420 167 347 3.6E-54 T 14-10-2018 IPR008972 Cupredoxin BD65_1376 503c140d393e87e8fdb7b627321d5a7f 477 Pfam PF07731 Multicopper oxidase 360 470 1.0E-13 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 BD65_1376 503c140d393e87e8fdb7b627321d5a7f 477 Gene3D G3DSA:2.60.40.420 348 475 4.5E-24 T 14-10-2018 IPR008972 Cupredoxin BD65_1376 503c140d393e87e8fdb7b627321d5a7f 477 Gene3D G3DSA:2.60.40.420 30 166 3.0E-31 T 14-10-2018 IPR008972 Cupredoxin BD65_1376 503c140d393e87e8fdb7b627321d5a7f 477 Pfam PF07732 Multicopper oxidase 61 168 1.2E-24 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BD65_1376 503c140d393e87e8fdb7b627321d5a7f 477 SUPERFAMILY SSF49503 174 293 3.17E-31 T 14-10-2018 IPR008972 Cupredoxin BD65_1376 503c140d393e87e8fdb7b627321d5a7f 477 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 470 58.229 T 14-10-2018 IPR026589 Cell division protein FtsP GO:0043093 BD65_1376 503c140d393e87e8fdb7b627321d5a7f 477 SUPERFAMILY SSF49503 3 167 1.3E-23 T 14-10-2018 IPR008972 Cupredoxin BD65_1376 503c140d393e87e8fdb7b627321d5a7f 477 SUPERFAMILY SSF49503 316 468 1.1E-17 T 14-10-2018 IPR008972 Cupredoxin BD65_1775 74cc211b11db9b639e85c93864f50623 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 79.905 T 14-10-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 BD65_1775 74cc211b11db9b639e85c93864f50623 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 6.1E-26 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BD65_1775 74cc211b11db9b639e85c93864f50623 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 189 3.5E-57 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BD65_1775 74cc211b11db9b639e85c93864f50623 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 6.7E-118 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BD65_1775 74cc211b11db9b639e85c93864f50623 420 SUPERFAMILY SSF51735 5 198 2.77E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1775 74cc211b11db9b639e85c93864f50623 420 Gene3D G3DSA:3.40.50.720 2 202 8.4E-63 T 14-10-2018 BD65_1775 74cc211b11db9b639e85c93864f50623 420 PIRSF PIRSF500136 1 420 6.5E-147 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 BD65_1775 74cc211b11db9b639e85c93864f50623 420 SUPERFAMILY SSF48179 206 298 2.04E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_1775 74cc211b11db9b639e85c93864f50623 420 SMART SM00984 324 420 1.6E-27 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BD65_1775 74cc211b11db9b639e85c93864f50623 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 2.0E-20 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BD65_1775 74cc211b11db9b639e85c93864f50623 420 SUPERFAMILY SSF52413 311 419 8.89E-27 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BD65_1775 74cc211b11db9b639e85c93864f50623 420 Gene3D G3DSA:3.40.50.720 205 420 9.7E-60 T 14-10-2018 BD65_1775 74cc211b11db9b639e85c93864f50623 420 PIRSF PIRSF000124 4 419 4.9E-73 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BD65_2217 e6c739b6fe1cd9cf502f78fb1db9f102 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.204 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2217 e6c739b6fe1cd9cf502f78fb1db9f102 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2217 e6c739b6fe1cd9cf502f78fb1db9f102 84 Gene3D G3DSA:2.40.50.140 1 84 6.7E-40 T 14-10-2018 BD65_2217 e6c739b6fe1cd9cf502f78fb1db9f102 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 6.5E-38 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2217 e6c739b6fe1cd9cf502f78fb1db9f102 84 SUPERFAMILY SSF50249 5 82 2.66E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2217 e6c739b6fe1cd9cf502f78fb1db9f102 84 Pfam PF00366 Ribosomal protein S17 10 76 1.6E-33 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2217 e6c739b6fe1cd9cf502f78fb1db9f102 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 9.2E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2217 e6c739b6fe1cd9cf502f78fb1db9f102 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 9.2E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2217 e6c739b6fe1cd9cf502f78fb1db9f102 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 9.2E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2217 e6c739b6fe1cd9cf502f78fb1db9f102 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_83 0e12eba0c0c138808a6bb40104912aa9 223 Gene3D G3DSA:3.40.50.2300 1 121 7.0E-40 T 14-10-2018 BD65_83 0e12eba0c0c138808a6bb40104912aa9 223 SUPERFAMILY SSF52172 1 175 4.13E-39 T 14-10-2018 IPR011006 CheY-like superfamily BD65_83 0e12eba0c0c138808a6bb40104912aa9 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 2.6E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_83 0e12eba0c0c138808a6bb40104912aa9 223 Gene3D G3DSA:1.10.10.10 123 223 6.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_83 0e12eba0c0c138808a6bb40104912aa9 223 SMART SM00448 1 112 3.4E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_83 0e12eba0c0c138808a6bb40104912aa9 223 SMART SM00862 145 220 2.8E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_83 0e12eba0c0c138808a6bb40104912aa9 223 Pfam PF00072 Response regulator receiver domain 3 112 3.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_774 fa5d3707c684f5c4efc028cf9256dc7d 826 Gene3D G3DSA:2.40.40.20 657 820 7.7E-51 T 14-10-2018 BD65_774 fa5d3707c684f5c4efc028cf9256dc7d 826 Gene3D G3DSA:3.40.228.10 198 649 4.8E-234 T 14-10-2018 BD65_774 fa5d3707c684f5c4efc028cf9256dc7d 826 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 506 523 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BD65_774 fa5d3707c684f5c4efc028cf9256dc7d 826 SUPERFAMILY SSF53706 63 683 5.1E-170 T 14-10-2018 BD65_774 fa5d3707c684f5c4efc028cf9256dc7d 826 Pfam PF01568 Molydopterin dinucleotide binding domain 683 797 8.9E-26 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BD65_774 fa5d3707c684f5c4efc028cf9256dc7d 826 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 62 823 0.0 T 14-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 BD65_774 fa5d3707c684f5c4efc028cf9256dc7d 826 SUPERFAMILY SSF50692 675 821 1.29E-39 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BD65_774 fa5d3707c684f5c4efc028cf9256dc7d 826 Gene3D G3DSA:3.90.55.10 61 623 4.8E-234 T 14-10-2018 BD65_774 fa5d3707c684f5c4efc028cf9256dc7d 826 Gene3D G3DSA:3.40.50.740 105 572 4.8E-234 T 14-10-2018 BD65_774 fa5d3707c684f5c4efc028cf9256dc7d 826 Pfam PF00384 Molybdopterin oxidoreductase 105 563 1.4E-94 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 Pfam PF00231 ATP synthase 5 288 7.6E-96 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 SUPERFAMILY SSF52943 2 289 6.93E-96 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 Gene3D G3DSA:3.40.1380.10 61 208 4.1E-111 T 14-10-2018 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 Gene3D G3DSA:1.10.287.80 6 285 4.1E-111 T 14-10-2018 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 36.249 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 4.3E-111 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 5.2E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 5.2E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 5.2E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1988 e3a93d8fadcd5d0bc4775838641dbb15 289 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 5.2E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_2786 888d4e2870def890405ce8823e88d5be 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 41.916 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 BD65_2786 888d4e2870def890405ce8823e88d5be 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 1.1E-129 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 BD65_148 a01d9810baf07a42c8f961e0f323dedd 281 SUPERFAMILY SSF53335 3 272 3.78E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_148 a01d9810baf07a42c8f961e0f323dedd 281 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_148 a01d9810baf07a42c8f961e0f323dedd 281 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 270 3.2E-90 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BD65_148 a01d9810baf07a42c8f961e0f323dedd 281 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 274 5.3E-90 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BD65_148 a01d9810baf07a42c8f961e0f323dedd 281 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 274 45.846 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BD65_148 a01d9810baf07a42c8f961e0f323dedd 281 Gene3D G3DSA:3.40.50.150 85 275 2.2E-62 T 14-10-2018 BD65_148 a01d9810baf07a42c8f961e0f323dedd 281 Pfam PF13847 Methyltransferase domain 109 247 2.2E-24 T 14-10-2018 IPR025714 Methyltransferase domain BD65_148 a01d9810baf07a42c8f961e0f323dedd 281 Gene3D G3DSA:1.10.8.10 1 84 4.3E-22 T 14-10-2018 BD65_2405 93eebf418008b7c8bde25d45cb8935bb 361 Pfam PF14072 DNA-sulfur modification-associated 12 345 1.9E-119 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB BD65_2405 93eebf418008b7c8bde25d45cb8935bb 361 TIGRFAM TIGR03187 DGQHR: DGQHR domain 14 288 4.1E-87 T 14-10-2018 IPR017601 DGQHR-containing domain BD65_2405 93eebf418008b7c8bde25d45cb8935bb 361 TIGRFAM TIGR03233 DNA_S_dndB: DNA sulfur modification protein DndB 8 357 1.3E-138 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB BD65_77 a7ee3e65e51a236a327e99b34f9fa9a8 415 Pfam PF02687 FtsX-like permease family 302 407 1.6E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BD65_77 a7ee3e65e51a236a327e99b34f9fa9a8 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 414 6.0E-155 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 BD65_77 a7ee3e65e51a236a327e99b34f9fa9a8 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 6 415 1.1E-206 T 14-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 BD65_77 a7ee3e65e51a236a327e99b34f9fa9a8 415 Pfam PF12704 MacB-like periplasmic core domain 28 237 9.7E-15 T 14-10-2018 IPR025857 MacB-like periplasmic core domain BD65_1842 cfacae610bfda09fb682d19d29f673a7 443 Gene3D G3DSA:1.10.8.60 335 440 2.8E-41 T 14-10-2018 BD65_1842 cfacae610bfda09fb682d19d29f673a7 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 3.6E-231 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BD65_1842 cfacae610bfda09fb682d19d29f673a7 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 9.3E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_1842 cfacae610bfda09fb682d19d29f673a7 443 SUPERFAMILY SSF52540 3 441 5.02E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1842 cfacae610bfda09fb682d19d29f673a7 443 SMART SM00382 49 332 6.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1842 cfacae610bfda09fb682d19d29f673a7 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 2.6E-41 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_1842 cfacae610bfda09fb682d19d29f673a7 443 SMART SM01086 335 429 2.2E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BD65_1842 cfacae610bfda09fb682d19d29f673a7 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 3.4E-6 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BD65_1842 cfacae610bfda09fb682d19d29f673a7 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.622 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BD65_2056 fffff73bd84be30c65f867347df91141 621 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 616 3.0E-203 T 14-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 BD65_2056 fffff73bd84be30c65f867347df91141 621 SUPERFAMILY SSF52540 2 165 4.64E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2056 fffff73bd84be30c65f867347df91141 621 Gene3D G3DSA:3.40.50.300 1 173 1.3E-44 T 14-10-2018 BD65_2056 fffff73bd84be30c65f867347df91141 621 Gene3D G3DSA:1.10.10.10 556 616 4.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2056 fffff73bd84be30c65f867347df91141 621 SUPERFAMILY SSF46785 426 493 1.13E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2056 fffff73bd84be30c65f867347df91141 621 Pfam PF00009 Elongation factor Tu GTP binding domain 2 165 1.4E-31 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2056 fffff73bd84be30c65f867347df91141 621 Pfam PF09107 Elongation factor SelB, winged helix 569 614 4.4E-20 T 14-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 BD65_2056 fffff73bd84be30c65f867347df91141 621 SUPERFAMILY SSF50465 280 359 6.12E-9 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BD65_2056 fffff73bd84be30c65f867347df91141 621 SUPERFAMILY SSF46785 565 616 7.89E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2056 fffff73bd84be30c65f867347df91141 621 SUPERFAMILY SSF50447 180 298 5.61E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_2056 fffff73bd84be30c65f867347df91141 621 Gene3D G3DSA:2.40.30.10 176 293 6.7E-23 T 14-10-2018 BD65_2056 fffff73bd84be30c65f867347df91141 621 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BD65_2056 fffff73bd84be30c65f867347df91141 621 Pfam PF09106 Elongation factor SelB, winged helix 434 489 2.6E-15 T 14-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 BD65_2056 fffff73bd84be30c65f867347df91141 621 Gene3D G3DSA:1.10.10.10 496 555 5.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2056 fffff73bd84be30c65f867347df91141 621 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.6E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2056 fffff73bd84be30c65f867347df91141 621 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.6E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2056 fffff73bd84be30c65f867347df91141 621 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.6E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2056 fffff73bd84be30c65f867347df91141 621 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.6E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.2E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 Gene3D G3DSA:3.30.390.30 346 467 1.6E-45 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 4.3E-63 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PIRSF PIRSF000350 1 468 3.8E-87 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.3E-68 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.3E-68 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.3E-68 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.3E-68 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.3E-68 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.3E-68 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.3E-68 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.3E-68 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.3E-68 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 5.2E-41 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.2E-41 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 5.2E-41 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.2E-41 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 5.2E-41 T 14-10-2018 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 SUPERFAMILY SSF55424 346 466 6.7E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 Gene3D G3DSA:3.50.50.60 150 271 6.4E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 Gene3D G3DSA:3.50.50.60 9 332 6.4E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 458 1.9E-148 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BD65_2582 0e6acf8ba5139735ff0270a4a35309c6 474 SUPERFAMILY SSF51905 2 337 7.41E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1183 176707d337776b707182223d770eaab3 262 PIRSF PIRSF000456 4 262 6.6E-108 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BD65_1183 176707d337776b707182223d770eaab3 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_1183 176707d337776b707182223d770eaab3 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 47 7.7E-7 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_1183 176707d337776b707182223d770eaab3 262 Gene3D G3DSA:2.160.10.10 1 196 1.1E-54 T 14-10-2018 BD65_1183 176707d337776b707182223d770eaab3 262 SUPERFAMILY SSF51161 2 262 9.98E-79 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BD65_1183 176707d337776b707182223d770eaab3 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BD65_1183 176707d337776b707182223d770eaab3 262 Gene3D G3DSA:1.20.1180.10 197 262 7.2E-27 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 BD65_1183 176707d337776b707182223d770eaab3 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.3E-28 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 BD65_1183 176707d337776b707182223d770eaab3 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BD65_1183 176707d337776b707182223d770eaab3 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.628 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BD65_1183 176707d337776b707182223d770eaab3 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.6E-110 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 3.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 3.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 SMART SM00304 199 251 5.4E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 451 1.4E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 Gene3D G3DSA:3.30.565.10 320 473 2.5E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 SUPERFAMILY SSF47384 235 314 1.26E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 SMART SM00387 360 473 8.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 SUPERFAMILY SSF55874 307 469 1.06E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 314 8.2E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 SMART SM00388 252 317 2.0E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 Pfam PF08521 Two-component sensor kinase N-terminal 27 175 9.5E-42 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal BD65_2866 d9874f4c7d7da6fc51a4fc696489ca67 473 Gene3D G3DSA:1.10.287.130 203 317 1.7E-16 T 14-10-2018 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BD65_1084 742965413d858343738d69c5f6bd2b3a 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.8E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 Pfam PF00679 Elongation factor G C-terminus 399 482 7.8E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BD65_1084 742965413d858343738d69c5f6bd2b3a 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 3.0E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal BD65_1084 742965413d858343738d69c5f6bd2b3a 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 171 1.8E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 SUPERFAMILY SSF54980 292 370 3.02E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like BD65_1084 742965413d858343738d69c5f6bd2b3a 599 Gene3D G3DSA:3.30.70.3380 368 478 9.5E-40 T 14-10-2018 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.7E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 Gene3D G3DSA:3.30.70.2570 479 553 7.8E-34 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily BD65_1084 742965413d858343738d69c5f6bd2b3a 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 5.8E-300 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 SUPERFAMILY SSF54980 399 493 9.11E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like BD65_1084 742965413d858343738d69c5f6bd2b3a 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.482 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 SUPERFAMILY SSF52540 2 235 9.43E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1084 742965413d858343738d69c5f6bd2b3a 599 Gene3D G3DSA:3.40.50.300 1 185 1.5E-70 T 14-10-2018 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 Gene3D G3DSA:3.30.70.870 286 367 2.3E-35 T 14-10-2018 BD65_1084 742965413d858343738d69c5f6bd2b3a 599 Gene3D G3DSA:2.40.30.10 186 285 1.8E-34 T 14-10-2018 BD65_2876 8e231595e1f096366073347f6f68eb0c 563 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 1.4E-78 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BD65_2876 8e231595e1f096366073347f6f68eb0c 563 SUPERFAMILY SSF51735 418 547 2.04E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2876 8e231595e1f096366073347f6f68eb0c 563 Gene3D G3DSA:1.20.1530.20 6 396 4.3E-79 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily BD65_2876 8e231595e1f096366073347f6f68eb0c 563 Pfam PF02254 TrkA-N domain 421 534 7.2E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BD65_2876 8e231595e1f096366073347f6f68eb0c 563 Gene3D G3DSA:3.40.50.720 412 550 8.4E-29 T 14-10-2018 BD65_2876 8e231595e1f096366073347f6f68eb0c 563 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 1.3E-80 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 BD65_376 311bdd7723cb36993fd958c176674771 314 PRINTS PR00482 Omptin serine protease signature 189 210 6.2E-100 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 PRINTS PR00482 Omptin serine protease signature 258 278 6.2E-100 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 PRINTS PR00482 Omptin serine protease signature 82 107 6.2E-100 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 PRINTS PR00482 Omptin serine protease signature 211 232 6.2E-100 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 PRINTS PR00482 Omptin serine protease signature 237 257 6.2E-100 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 PRINTS PR00482 Omptin serine protease signature 114 141 6.2E-100 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 PRINTS PR00482 Omptin serine protease signature 56 81 6.2E-100 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 PRINTS PR00482 Omptin serine protease signature 142 169 6.2E-100 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 PRINTS PR00482 Omptin serine protease signature 36 50 6.2E-100 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 ProSitePatterns PS00834 Aspartyl proteases, omptin family signature 1. 114 123 - T 14-10-2018 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 PIRSF PIRSF001522 1 314 2.1E-117 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 Pfam PF01278 Omptin family 29 314 1.5E-105 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 BD65_376 311bdd7723cb36993fd958c176674771 314 Gene3D G3DSA:2.40.128.90 22 314 2.6E-105 T 14-10-2018 BD65_376 311bdd7723cb36993fd958c176674771 314 SUPERFAMILY SSF69917 27 314 1.57E-93 T 14-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 BD65_2232 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:1.10.1050.10 1 102 7.6E-46 T 14-10-2018 BD65_2232 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF01479 S4 domain 97 143 7.2E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2232 f6d97c4f5674721605c1c4c9ef0497c7 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 8.6E-86 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BD65_2232 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:3.10.290.10 103 191 3.5E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BD65_2232 f6d97c4f5674721605c1c4c9ef0497c7 206 SUPERFAMILY SSF55174 3 206 6.54E-72 T 14-10-2018 BD65_2232 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM00363 96 160 8.2E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2232 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM01390 3 95 6.1E-50 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BD65_2232 f6d97c4f5674721605c1c4c9ef0497c7 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.196 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BD65_2232 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 6.8E-33 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BD65_2232 f6d97c4f5674721605c1c4c9ef0497c7 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_952 cfda17c44e9538d6d3d9a4994809b5c4 277 SUPERFAMILY SSF161098 17 265 3.27E-57 T 14-10-2018 IPR035906 MetI-like superfamily BD65_952 cfda17c44e9538d6d3d9a4994809b5c4 277 Gene3D G3DSA:1.10.3720.10 14 272 3.4E-69 T 14-10-2018 IPR035906 MetI-like superfamily BD65_952 cfda17c44e9538d6d3d9a4994809b5c4 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 269 7.5E-113 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 BD65_952 cfda17c44e9538d6d3d9a4994809b5c4 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 270 4.4E-114 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 BD65_952 cfda17c44e9538d6d3d9a4994809b5c4 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 7.0E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_2054 ecfc4fa50e47263b1504c9e6b282650f 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 23 306 6.4E-113 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 BD65_2054 ecfc4fa50e47263b1504c9e6b282650f 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 307 5.9E-119 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 BD65_2054 ecfc4fa50e47263b1504c9e6b282650f 309 SUPERFAMILY SSF144020 26 308 1.31E-94 T 14-10-2018 IPR024064 FdhE-like superfamily BD65_2054 ecfc4fa50e47263b1504c9e6b282650f 309 PIRSF PIRSF018296 1 309 9.9E-134 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 BD65_2054 ecfc4fa50e47263b1504c9e6b282650f 309 Gene3D G3DSA:3.90.1670.10 26 309 5.9E-90 T 14-10-2018 IPR024064 FdhE-like superfamily BD65_2054 ecfc4fa50e47263b1504c9e6b282650f 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 308 49.558 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 BD65_125 e9e1fc9daa0aa81bc9856480bad3dae1 359 SUPERFAMILY SSF53187 1 322 6.62E-83 T 14-10-2018 BD65_125 e9e1fc9daa0aa81bc9856480bad3dae1 359 Gene3D G3DSA:3.40.630.10 1 334 7.5E-109 T 14-10-2018 BD65_125 e9e1fc9daa0aa81bc9856480bad3dae1 359 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 335 137.189 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 BD65_125 e9e1fc9daa0aa81bc9856480bad3dae1 359 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 45 323 9.5E-61 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 BD65_125 e9e1fc9daa0aa81bc9856480bad3dae1 359 PIRSF PIRSF017020 1 329 1.7E-115 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 BD65_125 e9e1fc9daa0aa81bc9856480bad3dae1 359 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 321 5.4E-132 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 BD65_2752 14298a4ad4e098caf446ba922492ee92 254 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 1.0E-87 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2752 14298a4ad4e098caf446ba922492ee92 254 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 5.5E-92 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2752 14298a4ad4e098caf446ba922492ee92 254 SUPERFAMILY SSF53098 4 185 5.06E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2752 14298a4ad4e098caf446ba922492ee92 254 Gene3D G3DSA:3.30.420.10 4 190 3.2E-58 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2752 14298a4ad4e098caf446ba922492ee92 254 SMART SM00479 7 184 9.5E-50 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BD65_2752 14298a4ad4e098caf446ba922492ee92 254 Pfam PF00929 Exonuclease 9 175 3.7E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BD65_2752 14298a4ad4e098caf446ba922492ee92 254 Gene3D G3DSA:3.20.20.140 209 254 1.2E-7 T 14-10-2018 BD65_2597 c6cf98403eaa5edb4a9ebd53c027cc12 284 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 1.5E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BD65_2597 c6cf98403eaa5edb4a9ebd53c027cc12 284 SUPERFAMILY SSF52374 1 281 7.04E-105 T 14-10-2018 BD65_2597 c6cf98403eaa5edb4a9ebd53c027cc12 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.388 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BD65_2597 c6cf98403eaa5edb4a9ebd53c027cc12 284 Gene3D G3DSA:3.30.1300.10 180 283 2.8E-31 T 14-10-2018 BD65_2597 c6cf98403eaa5edb4a9ebd53c027cc12 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 8.2E-101 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BD65_2597 c6cf98403eaa5edb4a9ebd53c027cc12 284 Gene3D G3DSA:3.40.50.620 1 179 1.0E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2597 c6cf98403eaa5edb4a9ebd53c027cc12 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 1.1E-111 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 Pfam PF13377 Periplasmic binding protein-like domain 176 334 1.8E-29 T 14-10-2018 BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 Gene3D G3DSA:1.10.260.40 5 60 1.6E-24 T 14-10-2018 BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 3.4E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 SMART SM00354 6 76 3.0E-34 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 Gene3D G3DSA:3.40.50.2300 165 294 1.3E-65 T 14-10-2018 BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 Gene3D G3DSA:3.40.50.2300 61 309 1.3E-65 T 14-10-2018 BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 SUPERFAMILY SSF53822 66 335 5.14E-77 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-10-2018 BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 SUPERFAMILY SSF47413 6 64 1.45E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 7.2E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_3141 ffa946be40f7c2b703bd38a91d75fa12 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 7.2E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_2447 ffbaa2965dc00e3e0a6a06e7e99430ae 536 Pfam PF00884 Sulfatase 35 385 2.6E-74 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BD65_2447 ffbaa2965dc00e3e0a6a06e7e99430ae 536 Gene3D G3DSA:3.40.720.10 32 428 1.8E-99 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BD65_2447 ffbaa2965dc00e3e0a6a06e7e99430ae 536 ProSitePatterns PS00149 Sulfatases signature 2. 152 162 - T 14-10-2018 IPR024607 Sulfatase, conserved site BD65_2447 ffbaa2965dc00e3e0a6a06e7e99430ae 536 Gene3D G3DSA:3.30.1120.10 455 519 3.7E-12 T 14-10-2018 BD65_2447 ffbaa2965dc00e3e0a6a06e7e99430ae 536 SUPERFAMILY SSF53649 33 521 3.63E-108 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Gene3D G3DSA:1.10.290.10 286 410 7.7E-164 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 738 54.816 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 SUPERFAMILY SSF57783 593 628 2.55E-6 T 14-10-2018 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Gene3D G3DSA:1.10.460.10 171 577 7.7E-164 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BD65_294 6960e7ab2c1313747382736c62aed73f 871 SMART SM00436 139 227 2.9E-48 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Gene3D G3DSA:2.20.25.10 814 871 3.2E-31 T 14-10-2018 BD65_294 6960e7ab2c1313747382736c62aed73f 871 SMART SM00437 278 533 7.6E-120 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 1.8E-255 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 SMART SM00493 3 138 5.0E-35 T 14-10-2018 IPR006171 TOPRIM domain BD65_294 6960e7ab2c1313747382736c62aed73f 871 Pfam PF01751 Toprim domain 5 148 8.4E-33 T 14-10-2018 IPR006171 TOPRIM domain BD65_294 6960e7ab2c1313747382736c62aed73f 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 6.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 6.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 6.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 6.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 6.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 SUPERFAMILY SSF57783 751 813 5.61E-19 T 14-10-2018 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 3.7E-5 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 750 4.5E-11 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Gene3D G3DSA:3.40.50.140 1 169 1.0E-67 T 14-10-2018 BD65_294 6960e7ab2c1313747382736c62aed73f 871 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Gene3D G3DSA:3.30.65.10 706 750 1.1E-5 T 14-10-2018 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Gene3D G3DSA:3.30.65.10 751 813 2.2E-31 T 14-10-2018 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Pfam PF01131 DNA topoisomerase 163 571 5.4E-127 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 870 1.3E-23 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 764 799 3.9E-12 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 BD65_294 6960e7ab2c1313747382736c62aed73f 871 SUPERFAMILY SSF57783 815 871 5.95E-23 T 14-10-2018 BD65_294 6960e7ab2c1313747382736c62aed73f 871 Gene3D G3DSA:2.70.20.10 219 479 7.7E-164 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BD65_294 6960e7ab2c1313747382736c62aed73f 871 SUPERFAMILY SSF57783 707 749 7.82E-7 T 14-10-2018 BD65_294 6960e7ab2c1313747382736c62aed73f 871 SUPERFAMILY SSF56712 3 614 1.57E-201 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BD65_3160 bcebf6b4c24a954ad10df7c546df58a1 193 SUPERFAMILY SSF51283 1 193 1.31E-60 T 14-10-2018 IPR036157 dUTPase-like superfamily BD65_3160 bcebf6b4c24a954ad10df7c546df58a1 193 Pfam PF00692 dUTPase 79 185 6.6E-9 T 14-10-2018 IPR029054 dUTPase-like BD65_3160 bcebf6b4c24a954ad10df7c546df58a1 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 5.9E-69 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 BD65_3160 bcebf6b4c24a954ad10df7c546df58a1 193 Gene3D G3DSA:2.70.40.10 1 193 4.8E-53 T 14-10-2018 IPR036157 dUTPase-like superfamily BD65_3160 bcebf6b4c24a954ad10df7c546df58a1 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 34.693 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 BD65_2422 8cb26c774511aa3a88f90233acc23b54 424 Pfam PF00589 Phage integrase family 207 383 6.1E-18 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_2422 8cb26c774511aa3a88f90233acc23b54 424 SUPERFAMILY SSF56349 97 384 3.53E-48 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_2422 8cb26c774511aa3a88f90233acc23b54 424 Gene3D G3DSA:3.30.160.390 1 87 4.0E-35 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily BD65_2422 8cb26c774511aa3a88f90233acc23b54 424 Pfam PF13356 Arm DNA-binding domain 3 87 3.5E-21 T 14-10-2018 IPR025166 Integrase, DNA-binding domain BD65_2422 8cb26c774511aa3a88f90233acc23b54 424 Gene3D G3DSA:1.10.443.10 205 390 2.9E-14 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BD65_2422 8cb26c774511aa3a88f90233acc23b54 424 Gene3D G3DSA:1.10.150.130 88 203 1.6E-26 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BD65_913 10f14f4dab5d171a208604dae8f70dee 208 SUPERFAMILY SSF52540 2 188 2.56E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_913 10f14f4dab5d171a208604dae8f70dee 208 SMART SM00382 26 206 5.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_913 10f14f4dab5d171a208604dae8f70dee 208 Pfam PF00005 ABC transporter 18 157 4.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_913 10f14f4dab5d171a208604dae8f70dee 208 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_913 10f14f4dab5d171a208604dae8f70dee 208 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 201 7.6E-80 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 BD65_913 10f14f4dab5d171a208604dae8f70dee 208 Gene3D G3DSA:3.40.50.300 1 194 5.2E-44 T 14-10-2018 BD65_1911 b9b6d31fcfcde7d6aaa444ab2465120d 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 8.2E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BD65_1911 b9b6d31fcfcde7d6aaa444ab2465120d 341 SMART SM00829 12 338 9.1E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BD65_1911 b9b6d31fcfcde7d6aaa444ab2465120d 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 2.0E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BD65_1911 b9b6d31fcfcde7d6aaa444ab2465120d 341 SUPERFAMILY SSF50129 1 173 5.63E-53 T 14-10-2018 IPR011032 GroES-like superfamily BD65_1911 b9b6d31fcfcde7d6aaa444ab2465120d 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 2.6E-181 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BD65_1911 b9b6d31fcfcde7d6aaa444ab2465120d 341 Gene3D G3DSA:3.90.180.10 21 328 9.9E-120 T 14-10-2018 BD65_1911 b9b6d31fcfcde7d6aaa444ab2465120d 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.361 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BD65_1911 b9b6d31fcfcde7d6aaa444ab2465120d 341 SUPERFAMILY SSF51735 141 305 1.63E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1911 b9b6d31fcfcde7d6aaa444ab2465120d 341 Gene3D G3DSA:3.40.50.720 153 286 9.9E-120 T 14-10-2018 BD65_1911 b9b6d31fcfcde7d6aaa444ab2465120d 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1083 21.139 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 Gene3D G3DSA:1.10.486.10 456 664 7.7E-203 T 14-10-2018 BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 Gene3D G3DSA:1.10.10.160 79 187 1.1E-130 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 Gene3D G3DSA:3.40.50.10930 4 315 1.1E-130 T 14-10-2018 BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 SUPERFAMILY SSF52540 1 347 1.12E-128 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 SUPERFAMILY SSF52540 365 812 6.05E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 Gene3D G3DSA:1.10.10.990 865 935 8.0E-26 T 14-10-2018 BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 Gene3D G3DSA:3.40.50.300 334 809 7.7E-203 T 14-10-2018 BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 SUPERFAMILY SSF52980 819 1118 1.88E-92 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 4.2E-302 T 14-10-2018 BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 PIRSF PIRSF000980 1 1123 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BD65_1222 ed0bc621ccfc594d607f5db79d687d15 1123 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1088 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BD65_474 1127bf936224cc470a491193447a68c6 152 Gene3D G3DSA:3.90.1720.10 31 152 1.6E-39 T 14-10-2018 BD65_474 1127bf936224cc470a491193447a68c6 152 SUPERFAMILY SSF54001 31 152 3.19E-39 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BD65_474 1127bf936224cc470a491193447a68c6 152 Pfam PF00877 NlpC/P60 family 45 151 2.2E-29 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 SUPERFAMILY SSF53738 305 446 1.12E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 3.4E-18 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 SUPERFAMILY SSF53738 209 317 2.35E-8 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 SUPERFAMILY SSF55957 432 543 1.15E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 Gene3D G3DSA:3.40.120.10 221 318 1.4E-44 T 14-10-2018 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 6.9E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 Gene3D G3DSA:3.40.120.10 319 442 3.6E-36 T 14-10-2018 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 Gene3D G3DSA:3.30.310.50 443 546 9.6E-35 T 14-10-2018 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 7.3E-38 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 483 538 7.1E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 Gene3D G3DSA:3.40.120.10 12 218 1.2E-77 T 14-10-2018 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 0.0 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 SUPERFAMILY SSF53738 26 235 6.36E-53 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_3008 5ff4a7e7d04d9f07a67a42e697cdc64a 547 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 Gene3D G3DSA:3.90.1600.10 298 400 3.4E-30 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 Gene3D G3DSA:3.90.1600.10 401 583 1.7E-56 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 Gene3D G3DSA:1.10.132.60 590 734 2.8E-61 T 14-10-2018 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 Pfam PF03104 DNA polymerase family B, exonuclease domain 154 246 1.3E-5 T 14-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 Pfam PF03104 DNA polymerase family B, exonuclease domain 25 113 1.6E-6 T 14-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 SUPERFAMILY SSF56672 335 728 5.45E-117 T 14-10-2018 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 Pfam PF00136 DNA polymerase family B 328 689 2.2E-41 T 14-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 Gene3D G3DSA:3.30.70.2250 1 55 2.9E-22 T 14-10-2018 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 SMART SM00486 98 505 7.1E-67 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 491 499 5.9E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 439 451 5.9E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 365 378 5.9E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 SUPERFAMILY SSF53098 3 339 1.93E-81 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 Gene3D G3DSA:3.30.420.10 101 297 1.4E-73 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2529 4cb9cf354ee914119ce8c14a5238add4 734 ProSitePatterns PS00116 DNA polymerase family B signature. 493 501 - T 14-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_871 c19ebd7c629691f1a87b288d7a5b8418 505 Pfam PF13522 Glutamine amidotransferase domain 65 210 4.6E-15 T 14-10-2018 BD65_871 c19ebd7c629691f1a87b288d7a5b8418 505 Gene3D G3DSA:3.40.50.2020 279 443 1.8E-161 T 14-10-2018 BD65_871 c19ebd7c629691f1a87b288d7a5b8418 505 Gene3D G3DSA:3.60.20.10 2 414 1.8E-161 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_871 c19ebd7c629691f1a87b288d7a5b8418 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.99 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BD65_871 c19ebd7c629691f1a87b288d7a5b8418 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 2.5E-8 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BD65_871 c19ebd7c629691f1a87b288d7a5b8418 505 PIRSF PIRSF000485 1 483 7.3E-170 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BD65_871 c19ebd7c629691f1a87b288d7a5b8418 505 SUPERFAMILY SSF56235 2 259 1.12E-75 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_871 c19ebd7c629691f1a87b288d7a5b8418 505 SUPERFAMILY SSF53271 252 485 1.22E-72 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BD65_871 c19ebd7c629691f1a87b288d7a5b8418 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 9.6E-162 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 PIRSF PIRSF000722 2 400 3.5E-144 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 Pfam PF00871 Acetokinase family 6 393 1.9E-176 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 2.1E-183 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 Gene3D G3DSA:3.30.420.40 199 400 2.0E-87 T 14-10-2018 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 SUPERFAMILY SSF53067 160 398 8.64E-85 T 14-10-2018 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 SUPERFAMILY SSF53067 4 199 6.47E-63 T 14-10-2018 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 PRINTS PR00471 Acetate kinase family signature 6 17 6.2E-49 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 PRINTS PR00471 Acetate kinase family signature 325 341 6.2E-49 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 PRINTS PR00471 Acetate kinase family signature 380 392 6.2E-49 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 PRINTS PR00471 Acetate kinase family signature 176 189 6.2E-49 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 PRINTS PR00471 Acetate kinase family signature 206 227 6.2E-49 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 PRINTS PR00471 Acetate kinase family signature 302 315 6.2E-49 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 188.463 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_855 d7a0c56c02467112a21eb0e18fb9d450 400 Gene3D G3DSA:3.30.420.40 3 198 2.4E-77 T 14-10-2018 BD65_3230 b5ed55bf7f56fadb1bac90b7131c0b84 1192 SUPERFAMILY SSF46785 1125 1190 7.62E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_3230 b5ed55bf7f56fadb1bac90b7131c0b84 1192 Gene3D G3DSA:1.10.10.10 1129 1192 7.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_3230 b5ed55bf7f56fadb1bac90b7131c0b84 1192 SMART SM00843 1125 1190 2.3E-41 T 14-10-2018 IPR018541 FtsK gamma domain BD65_3230 b5ed55bf7f56fadb1bac90b7131c0b84 1192 SUPERFAMILY SSF52540 784 1096 7.7E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3230 b5ed55bf7f56fadb1bac90b7131c0b84 1192 Pfam PF01580 FtsK/SpoIIIE family 810 1023 1.0E-72 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BD65_3230 b5ed55bf7f56fadb1bac90b7131c0b84 1192 Gene3D G3DSA:3.30.980.40 702 806 3.1E-34 T 14-10-2018 BD65_3230 b5ed55bf7f56fadb1bac90b7131c0b84 1192 Gene3D G3DSA:3.40.50.300 807 1109 4.4E-124 T 14-10-2018 BD65_3230 b5ed55bf7f56fadb1bac90b7131c0b84 1192 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 1.7E-45 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region BD65_3230 b5ed55bf7f56fadb1bac90b7131c0b84 1192 Pfam PF09397 Ftsk gamma domain 1127 1187 2.3E-27 T 14-10-2018 IPR018541 FtsK gamma domain BD65_158 85e0b988924d76c44746ada58fe08ab0 504 SUPERFAMILY SSF103473 25 199 2.22E-14 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_158 85e0b988924d76c44746ada58fe08ab0 504 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 19 488 9.7E-62 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BD65_158 85e0b988924d76c44746ada58fe08ab0 504 SUPERFAMILY SSF103473 221 486 4.05E-11 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_158 85e0b988924d76c44746ada58fe08ab0 504 Pfam PF00854 POT family 90 445 7.9E-25 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BD65_158 85e0b988924d76c44746ada58fe08ab0 504 Gene3D G3DSA:1.20.1250.20 12 488 6.5E-86 T 14-10-2018 BD65_778 ec176f68f53f8bc3aef07054a2140d7a 396 SUPERFAMILY SSF51658 1 383 5.89E-79 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily BD65_778 ec176f68f53f8bc3aef07054a2140d7a 396 Gene3D G3DSA:3.20.20.150 1 391 3.0E-146 T 14-10-2018 BD65_778 ec176f68f53f8bc3aef07054a2140d7a 396 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 2.2E-211 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 BD65_778 ec176f68f53f8bc3aef07054a2140d7a 396 PIRSF PIRSF016049 1 392 6.4E-178 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 BD65_778 ec176f68f53f8bc3aef07054a2140d7a 396 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 4.8E-156 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 BD65_778 ec176f68f53f8bc3aef07054a2140d7a 396 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 396 222.473 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 BD65_1538 488ea734402d73d85cb709b71d5618f2 311 SUPERFAMILY SSF111369 46 202 5.62E-20 T 14-10-2018 BD65_1538 488ea734402d73d85cb709b71d5618f2 311 Pfam PF13533 Biotin-lipoyl like 47 95 1.8E-17 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BD65_1538 488ea734402d73d85cb709b71d5618f2 311 Gene3D G3DSA:2.40.50.100 47 111 6.1E-11 T 14-10-2018 BD65_1538 488ea734402d73d85cb709b71d5618f2 311 Pfam PF13437 HlyD family secretion protein 156 241 2.5E-11 T 14-10-2018 BD65_1538 488ea734402d73d85cb709b71d5618f2 311 Gene3D G3DSA:2.40.30.170 171 296 1.8E-20 T 14-10-2018 BD65_1538 488ea734402d73d85cb709b71d5618f2 311 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 243 1.4E-28 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BD65_1538 488ea734402d73d85cb709b71d5618f2 311 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 311 54.858 T 14-10-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA BD65_1621 293e0136e330d3e192711df3a24f8cbd 279 Pfam PF09339 IclR helix-turn-helix domain 29 79 8.4E-18 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BD65_1621 293e0136e330d3e192711df3a24f8cbd 279 SMART SM00346 27 117 4.0E-34 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BD65_1621 293e0136e330d3e192711df3a24f8cbd 279 Gene3D G3DSA:1.10.10.10 25 100 5.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1621 293e0136e330d3e192711df3a24f8cbd 279 SUPERFAMILY SSF55781 98 274 1.5E-50 T 14-10-2018 BD65_1621 293e0136e330d3e192711df3a24f8cbd 279 SUPERFAMILY SSF46785 27 100 1.39E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1621 293e0136e330d3e192711df3a24f8cbd 279 Pfam PF01614 Bacterial transcriptional regulator 148 271 1.6E-39 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal BD65_1621 293e0136e330d3e192711df3a24f8cbd 279 Gene3D G3DSA:3.30.450.40 101 278 6.0E-67 T 14-10-2018 IPR029016 GAF-like domain superfamily BD65_1816 f94cbb4ced7d652a7cede38390e67d6e 79 Pfam PF05534 HicB family 34 73 2.4E-13 T 14-10-2018 IPR008651 Uncharacterised protein family HicB BD65_1816 f94cbb4ced7d652a7cede38390e67d6e 79 SUPERFAMILY SSF47598 44 77 4.45E-6 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BD65_848 27a5f155fb602387dfe4b0b4e45f163b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_848 27a5f155fb602387dfe4b0b4e45f163b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_848 27a5f155fb602387dfe4b0b4e45f163b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_848 27a5f155fb602387dfe4b0b4e45f163b 308 SUPERFAMILY SSF53850 96 252 3.72E-30 T 14-10-2018 BD65_848 27a5f155fb602387dfe4b0b4e45f163b 308 Gene3D G3DSA:1.10.10.10 8 92 9.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_848 27a5f155fb602387dfe4b0b4e45f163b 308 SUPERFAMILY SSF46785 11 119 1.04E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_848 27a5f155fb602387dfe4b0b4e45f163b 308 Gene3D G3DSA:3.40.190.10 103 269 3.5E-59 T 14-10-2018 BD65_848 27a5f155fb602387dfe4b0b4e45f163b 308 Pfam PF03466 LysR substrate binding domain 97 248 1.0E-28 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_848 27a5f155fb602387dfe4b0b4e45f163b 308 Gene3D G3DSA:3.40.190.10 169 262 3.5E-59 T 14-10-2018 BD65_848 27a5f155fb602387dfe4b0b4e45f163b 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 7.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1442 395ca6e483d3cb1cc50f3650db17dd3d 129 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 67 2.4E-6 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal BD65_2693 15ca9a08bb2ea47670cb03ea40eb804a 188 Gene3D G3DSA:2.10.70.20 137 185 1.3E-11 T 14-10-2018 BD65_2693 15ca9a08bb2ea47670cb03ea40eb804a 188 Gene3D G3DSA:3.10.610.10 25 133 9.5E-18 T 14-10-2018 BD65_2693 15ca9a08bb2ea47670cb03ea40eb804a 188 Pfam PF11612 Type II secretion system (T2SS), protein J 46 179 3.6E-27 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 BD65_2693 15ca9a08bb2ea47670cb03ea40eb804a 188 SUPERFAMILY SSF54523 27 183 9.42E-43 T 14-10-2018 BD65_2693 15ca9a08bb2ea47670cb03ea40eb804a 188 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 1 180 1.5E-42 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 BD65_1205 8d95768a87ce4633a0a32a4924fea0c1 454 Gene3D G3DSA:3.30.1850.10 1 119 7.2E-52 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BD65_1205 8d95768a87ce4633a0a32a4924fea0c1 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 1.4E-46 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BD65_1205 8d95768a87ce4633a0a32a4924fea0c1 454 Pfam PF03641 Possible lysine decarboxylase 190 329 7.5E-33 T 14-10-2018 IPR031100 LOG family BD65_1205 8d95768a87ce4633a0a32a4924fea0c1 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 4.4E-57 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BD65_1205 8d95768a87ce4633a0a32a4924fea0c1 454 SUPERFAMILY SSF102405 119 330 2.44E-40 T 14-10-2018 BD65_1205 8d95768a87ce4633a0a32a4924fea0c1 454 Gene3D G3DSA:3.40.50.450 120 452 4.6E-121 T 14-10-2018 BD65_955 15b30adb6997e016ae0962b2b09ca323 294 SUPERFAMILY SSF46689 12 86 3.58E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_955 15b30adb6997e016ae0962b2b09ca323 294 Gene3D G3DSA:1.10.10.10 9 90 2.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_955 15b30adb6997e016ae0962b2b09ca323 294 SUPERFAMILY SSF53697 106 290 6.81E-42 T 14-10-2018 BD65_955 15b30adb6997e016ae0962b2b09ca323 294 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 86 7.3E-22 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BD65_955 15b30adb6997e016ae0962b2b09ca323 294 Gene3D G3DSA:3.40.50.10490 110 292 7.5E-45 T 14-10-2018 BD65_955 15b30adb6997e016ae0962b2b09ca323 294 Pfam PF01380 SIS domain 140 267 5.9E-18 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_930 5d1156ab74d5b444345fa5a587c22b3f 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 2.0E-16 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BD65_930 5d1156ab74d5b444345fa5a587c22b3f 394 Pfam PF07670 Nucleoside recognition 92 190 1.3E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BD65_930 5d1156ab74d5b444345fa5a587c22b3f 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 2.4E-59 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BD65_2896 b839f12c5f9c2945fc078d0dc7c4db5d 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site BD65_2896 b839f12c5f9c2945fc078d0dc7c4db5d 304 SUPERFAMILY SSF117892 49 183 6.93E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily BD65_2896 b839f12c5f9c2945fc078d0dc7c4db5d 304 Gene3D G3DSA:3.30.479.30 46 178 2.8E-42 T 14-10-2018 BD65_2896 b839f12c5f9c2945fc078d0dc7c4db5d 304 PRINTS PR00721 Stomatin signature 128 151 2.0E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BD65_2896 b839f12c5f9c2945fc078d0dc7c4db5d 304 PRINTS PR00721 Stomatin signature 171 192 2.0E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BD65_2896 b839f12c5f9c2945fc078d0dc7c4db5d 304 PRINTS PR00721 Stomatin signature 108 125 2.0E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BD65_2896 b839f12c5f9c2945fc078d0dc7c4db5d 304 PRINTS PR00721 Stomatin signature 152 170 2.0E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BD65_2896 b839f12c5f9c2945fc078d0dc7c4db5d 304 PRINTS PR00721 Stomatin signature 73 94 2.0E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BD65_2896 b839f12c5f9c2945fc078d0dc7c4db5d 304 Pfam PF01145 SPFH domain / Band 7 family 22 200 7.5E-31 T 14-10-2018 IPR001107 Band 7 domain BD65_2896 b839f12c5f9c2945fc078d0dc7c4db5d 304 SMART SM00244 18 176 3.0E-59 T 14-10-2018 IPR001107 Band 7 domain BD65_634 1172b1947711f4619ed8a545cb6b11fb 338 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 126 143 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 BD65_634 1172b1947711f4619ed8a545cb6b11fb 338 Pfam PF13343 Bacterial extracellular solute-binding protein 81 305 3.1E-24 T 14-10-2018 BD65_634 1172b1947711f4619ed8a545cb6b11fb 338 Gene3D G3DSA:3.40.190.10 34 308 5.7E-109 T 14-10-2018 BD65_634 1172b1947711f4619ed8a545cb6b11fb 338 PIRSF PIRSF002825 7 338 5.7E-82 T 14-10-2018 IPR026045 Ferric binding protein BD65_634 1172b1947711f4619ed8a545cb6b11fb 338 Gene3D G3DSA:3.40.190.10 128 313 5.7E-109 T 14-10-2018 BD65_634 1172b1947711f4619ed8a545cb6b11fb 338 SUPERFAMILY SSF53850 33 326 2.72E-73 T 14-10-2018 BD65_1684 18fb1061e2ff440930064512ca1ce6d5 259 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 5.2E-78 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BD65_1684 18fb1061e2ff440930064512ca1ce6d5 259 ProSitePatterns PS01218 TatC family signature. 154 173 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site BD65_1684 18fb1061e2ff440930064512ca1ce6d5 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.8E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BD65_1684 18fb1061e2ff440930064512ca1ce6d5 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.8E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BD65_1684 18fb1061e2ff440930064512ca1ce6d5 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.8E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BD65_1684 18fb1061e2ff440930064512ca1ce6d5 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.8E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BD65_1684 18fb1061e2ff440930064512ca1ce6d5 259 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 3.0E-64 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BD65_1684 18fb1061e2ff440930064512ca1ce6d5 259 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 241 15.9 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 Gene3D G3DSA:2.30.22.10 133 189 6.1E-27 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 ProSitePatterns PS01071 grpE protein signature. 144 187 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 Hamap MF_01151 Protein GrpE [grpE]. 4 189 21.468 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 Pfam PF01025 GrpE 21 189 2.0E-49 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 Gene3D G3DSA:3.90.20.20 30 132 3.3E-34 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 SUPERFAMILY SSF51064 134 190 7.85E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 PRINTS PR00773 GrpE protein signature 141 156 4.1E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 PRINTS PR00773 GrpE protein signature 168 187 4.1E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 PRINTS PR00773 GrpE protein signature 86 101 4.1E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 PRINTS PR00773 GrpE protein signature 58 74 4.1E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BD65_1096 c16dc3438f0c1a62ed7fb93de7ac57fa 192 SUPERFAMILY SSF58014 44 133 4.45E-26 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 22 205 6.3E-51 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 Gene3D G3DSA:1.20.59.20 236 320 6.8E-31 T 14-10-2018 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 Pfam PF01171 PP-loop family 23 200 3.4E-54 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 SUPERFAMILY SSF52402 14 235 6.84E-60 T 14-10-2018 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 SUPERFAMILY SSF56037 328 439 1.65E-31 T 14-10-2018 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 Gene3D G3DSA:3.40.50.620 12 235 1.7E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 10 309 23.484 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 SUPERFAMILY SSF82829 236 320 5.75E-26 T 14-10-2018 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 366 410 1.6E-13 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 SMART SM00977 366 438 5.1E-22 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 Pfam PF11734 TilS substrate C-terminal domain 366 438 3.1E-25 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BD65_1174 403453f655bcd8ce4cccdfa9cb95e08f 448 Pfam PF09179 TilS substrate binding domain 250 317 6.8E-19 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BD65_580 badc5f93d7eca00e7f0932bc2078a247 246 Gene3D G3DSA:3.60.140.10 29 212 2.5E-48 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily BD65_580 badc5f93d7eca00e7f0932bc2078a247 246 SUPERFAMILY SSF64438 12 193 1.03E-46 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BD65_580 badc5f93d7eca00e7f0932bc2078a247 246 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 40 192 4.8E-42 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BD65_580 badc5f93d7eca00e7f0932bc2078a247 246 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 39 192 6.9E-43 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BD65_856 cb7018be0db48a7baf94af4674f2c386 715 PIRSF PIRSF006107 1 714 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BD65_856 cb7018be0db48a7baf94af4674f2c386 715 Pfam PF13500 AAA domain 3 229 3.3E-51 T 14-10-2018 BD65_856 cb7018be0db48a7baf94af4674f2c386 715 Gene3D G3DSA:3.40.1390.20 225 365 2.6E-14 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BD65_856 cb7018be0db48a7baf94af4674f2c386 715 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 7.5E-127 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BD65_856 cb7018be0db48a7baf94af4674f2c386 715 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 2.5E-135 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BD65_856 cb7018be0db48a7baf94af4674f2c386 715 SUPERFAMILY SSF52540 3 240 8.5E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_856 cb7018be0db48a7baf94af4674f2c386 715 Gene3D G3DSA:3.40.50.10950 398 708 4.5E-135 T 14-10-2018 BD65_856 cb7018be0db48a7baf94af4674f2c386 715 SUPERFAMILY SSF53659 392 709 1.32E-93 T 14-10-2018 BD65_856 cb7018be0db48a7baf94af4674f2c386 715 Gene3D G3DSA:3.40.50.10750 529 682 4.5E-135 T 14-10-2018 BD65_856 cb7018be0db48a7baf94af4674f2c386 715 Pfam PF07085 DRTGG domain 233 344 2.8E-28 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BD65_856 cb7018be0db48a7baf94af4674f2c386 715 SUPERFAMILY SSF75138 229 353 4.32E-25 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BD65_856 cb7018be0db48a7baf94af4674f2c386 715 Gene3D G3DSA:3.40.50.300 1 210 5.7E-12 T 14-10-2018 BD65_3253 ac9ee32841802fdce8c7fb1e27d91ec8 252 Pfam PF02348 Cytidylyltransferase 4 221 1.3E-69 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 BD65_3253 ac9ee32841802fdce8c7fb1e27d91ec8 252 Gene3D G3DSA:3.90.550.10 1 249 1.9E-99 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_3253 ac9ee32841802fdce8c7fb1e27d91ec8 252 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.8E-123 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 BD65_3253 ac9ee32841802fdce8c7fb1e27d91ec8 252 SUPERFAMILY SSF53448 3 247 9.46E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_3253 ac9ee32841802fdce8c7fb1e27d91ec8 252 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.177 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 BD65_698 15a68a0f7082726b32bfc94c2c7461ec 134 Pfam PF00460 Flagella basal body rod protein 7 37 3.3E-9 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BD65_698 15a68a0f7082726b32bfc94c2c7461ec 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 1.4E-52 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 BD65_698 15a68a0f7082726b32bfc94c2c7461ec 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BD65_698 15a68a0f7082726b32bfc94c2c7461ec 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 2.6E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BD65_2503 73c7cb5cf428e427ba050b58ca2ad3cd 394 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 387 23.675 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BD65_2503 73c7cb5cf428e427ba050b58ca2ad3cd 394 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 1.1E-172 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BD65_2503 73c7cb5cf428e427ba050b58ca2ad3cd 394 Gene3D G3DSA:1.20.1530.10 2 388 9.3E-155 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily BD65_2503 73c7cb5cf428e427ba050b58ca2ad3cd 394 Pfam PF06965 Na+/H+ antiporter 1 7 380 3.4E-150 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BD65_1577 6c75d195b046ab46d9d083ecf399cf3f 451 Gene3D G3DSA:3.40.50.300 164 443 2.2E-104 T 14-10-2018 BD65_1577 6c75d195b046ab46d9d083ecf399cf3f 451 Gene3D G3DSA:1.10.860.10 2 163 2.4E-54 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BD65_1577 6c75d195b046ab46d9d083ecf399cf3f 451 Pfam PF00772 DnaB-like helicase N terminal domain 7 108 4.2E-36 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BD65_1577 6c75d195b046ab46d9d083ecf399cf3f 451 SMART SM00382 203 409 2.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1577 6c75d195b046ab46d9d083ecf399cf3f 451 SUPERFAMILY SSF48024 5 116 7.45E-38 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 BD65_1577 6c75d195b046ab46d9d083ecf399cf3f 451 SUPERFAMILY SSF52540 184 436 8.26E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1577 6c75d195b046ab46d9d083ecf399cf3f 451 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 6 444 6.4E-175 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 BD65_1577 6c75d195b046ab46d9d083ecf399cf3f 451 Pfam PF03796 DnaB-like helicase C terminal domain 186 442 1.7E-111 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 BD65_884 2d9094cc52386769ab90135a401c1c78 166 SUPERFAMILY SSF52833 41 157 3.02E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_884 2d9094cc52386769ab90135a401c1c78 166 Pfam PF00578 AhpC/TSA family 45 134 5.2E-11 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BD65_884 2d9094cc52386769ab90135a401c1c78 166 Gene3D G3DSA:3.40.30.10 40 155 2.1E-20 T 14-10-2018 BD65_2571 f8f863ce4c9724071d98cf6e34a72d8f 398 Pfam PF00482 Type II secretion system (T2SS), protein F 269 389 3.5E-28 T 14-10-2018 IPR018076 Type II secretion system F domain BD65_2571 f8f863ce4c9724071d98cf6e34a72d8f 398 Pfam PF00482 Type II secretion system (T2SS), protein F 63 186 5.7E-27 T 14-10-2018 IPR018076 Type II secretion system F domain BD65_2571 f8f863ce4c9724071d98cf6e34a72d8f 398 Gene3D G3DSA:1.20.81.30 54 164 2.5E-27 T 14-10-2018 BD65_2571 f8f863ce4c9724071d98cf6e34a72d8f 398 Gene3D G3DSA:1.20.81.30 250 360 4.6E-24 T 14-10-2018 BD65_2571 f8f863ce4c9724071d98cf6e34a72d8f 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 5.8E-13 T 14-10-2018 IPR003004 GspF/PilC family BD65_2571 f8f863ce4c9724071d98cf6e34a72d8f 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 378 397 5.8E-13 T 14-10-2018 IPR003004 GspF/PilC family BD65_2571 f8f863ce4c9724071d98cf6e34a72d8f 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 5.8E-13 T 14-10-2018 IPR003004 GspF/PilC family BD65_2571 f8f863ce4c9724071d98cf6e34a72d8f 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 362 376 5.8E-13 T 14-10-2018 IPR003004 GspF/PilC family BD65_1508 7d6d5525cea45748189326e73bc508ba 267 SUPERFAMILY SSF52540 8 237 2.61E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1508 7d6d5525cea45748189326e73bc508ba 267 Gene3D G3DSA:3.40.50.300 6 249 1.3E-62 T 14-10-2018 BD65_1508 7d6d5525cea45748189326e73bc508ba 267 SMART SM00382 33 230 7.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1508 7d6d5525cea45748189326e73bc508ba 267 Pfam PF00005 ABC transporter 25 172 1.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1508 7d6d5525cea45748189326e73bc508ba 267 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_986 a2fa0b71bd01f57d9f117a4d0bfe4838 349 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 344 39.292 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC BD65_986 a2fa0b71bd01f57d9f117a4d0bfe4838 349 Gene3D G3DSA:3.30.310.170 227 349 5.9E-52 T 14-10-2018 BD65_986 a2fa0b71bd01f57d9f117a4d0bfe4838 349 PIRSF PIRSF026343 9 346 1.1E-118 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC BD65_986 a2fa0b71bd01f57d9f117a4d0bfe4838 349 Pfam PF06804 NlpB/DapX lipoprotein 40 343 2.8E-112 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein BD65_986 a2fa0b71bd01f57d9f117a4d0bfe4838 349 Gene3D G3DSA:3.30.530.50 101 213 7.5E-44 T 14-10-2018 BD65_184 4b824243634e59363f9434b50708c329 493 Pfam PF00854 POT family 82 441 2.2E-91 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BD65_184 4b824243634e59363f9434b50708c329 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BD65_184 4b824243634e59363f9434b50708c329 493 SUPERFAMILY SSF103473 7 489 2.22E-28 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_184 4b824243634e59363f9434b50708c329 493 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 46.438 T 14-10-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B BD65_184 4b824243634e59363f9434b50708c329 493 Gene3D G3DSA:1.20.1250.20 6 483 4.0E-113 T 14-10-2018 BD65_184 4b824243634e59363f9434b50708c329 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 5.6E-186 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 SUPERFAMILY SSF55347 176 488 1.14E-112 T 14-10-2018 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 SUPERFAMILY SSF51735 5 189 8.86E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 Gene3D G3DSA:3.30.360.10 176 476 2.3E-168 T 14-10-2018 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.935 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 7.8E-200 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 Gene3D G3DSA:3.40.50.720 12 437 2.3E-168 T 14-10-2018 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 7.0E-59 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 PIRSF PIRSF000110 1 491 1.3E-182 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 1.4E-47 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 1.4E-47 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 1.4E-47 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 1.4E-47 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 1.4E-47 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_192 d2a71cae4ff6f1f34ba133a39e0a5569 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 1.3E-115 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BD65_2375 02e24e1da0c62dd6400402edb67d8c87 219 SUPERFAMILY SSF51735 1 200 7.69E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2375 02e24e1da0c62dd6400402edb67d8c87 219 Pfam PF13460 NAD(P)H-binding 8 189 2.2E-6 T 14-10-2018 IPR016040 NAD(P)-binding domain BD65_2375 02e24e1da0c62dd6400402edb67d8c87 219 Gene3D G3DSA:3.40.50.720 1 214 2.1E-50 T 14-10-2018 BD65_2375 02e24e1da0c62dd6400402edb67d8c87 219 SMART SM00859 3 95 0.0053 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 SUPERFAMILY SSF51735 314 495 3.53E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 Gene3D G3DSA:1.10.1040.50 497 709 4.1E-73 T 14-10-2018 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 51.9 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 9.6E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 SUPERFAMILY SSF52096 2 305 6.59E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 SUPERFAMILY SSF48179 495 611 4.0E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 9.4E-61 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 Gene3D G3DSA:3.40.50.720 314 496 2.9E-66 T 14-10-2018 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 3.8E-24 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 Gene3D G3DSA:3.90.226.10 1 311 2.3E-91 T 14-10-2018 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BD65_1676 364a68a9af589d3c1a7bb18a3bc7a458 729 SUPERFAMILY SSF48179 623 714 1.45E-22 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_1305 7c3a0fd83dfb4692ed66901e58a52e75 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.51 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 BD65_1305 7c3a0fd83dfb4692ed66901e58a52e75 187 Gene3D G3DSA:3.40.1740.10 1 187 3.8E-65 T 14-10-2018 BD65_1305 7c3a0fd83dfb4692ed66901e58a52e75 187 SUPERFAMILY SSF143456 1 187 2.09E-66 T 14-10-2018 BD65_1305 7c3a0fd83dfb4692ed66901e58a52e75 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.6E-49 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 BD65_324 5788567d961217443ad2d524e120c1c7 293 Pfam PF09313 Domain of unknown function (DUF1971) 8 88 6.6E-29 T 14-10-2018 IPR015392 Domain of unknown function DUF1971 BD65_324 5788567d961217443ad2d524e120c1c7 293 Gene3D G3DSA:2.60.120.10 1 106 2.2E-38 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_324 5788567d961217443ad2d524e120c1c7 293 SUPERFAMILY SSF53335 101 265 3.38E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_324 5788567d961217443ad2d524e120c1c7 293 PIRSF PIRSF005215 1 287 1.1E-134 T 14-10-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 BD65_324 5788567d961217443ad2d524e120c1c7 293 SUPERFAMILY SSF51197 1 101 9.06E-36 T 14-10-2018 BD65_324 5788567d961217443ad2d524e120c1c7 293 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 48 285 6.6E-107 T 14-10-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 BD65_324 5788567d961217443ad2d524e120c1c7 293 Pfam PF03848 Tellurite resistance protein TehB 90 282 7.0E-101 T 14-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain BD65_324 5788567d961217443ad2d524e120c1c7 293 Gene3D G3DSA:3.40.50.150 107 286 1.1E-40 T 14-10-2018 BD65_763 44c481f40ef0da5cfcbbdd034fb2fbdd 478 Pfam PF00324 Amino acid permease 9 463 2.8E-143 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BD65_763 44c481f40ef0da5cfcbbdd034fb2fbdd 478 PIRSF PIRSF006060 1 472 5.5E-81 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_763 44c481f40ef0da5cfcbbdd034fb2fbdd 478 ProSitePatterns PS00218 Amino acid permeases signature. 34 65 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BD65_763 44c481f40ef0da5cfcbbdd034fb2fbdd 478 Gene3D G3DSA:1.20.1740.10 2 468 8.9E-64 T 14-10-2018 BD65_591 94cb87a8e3528e6f775c68a0a17b03c8 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 103 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BD65_591 94cb87a8e3528e6f775c68a0a17b03c8 128 Gene3D G3DSA:1.10.10.60 3 60 2.1E-19 T 14-10-2018 BD65_591 94cb87a8e3528e6f775c68a0a17b03c8 128 Gene3D G3DSA:1.10.10.60 61 119 1.0E-16 T 14-10-2018 BD65_591 94cb87a8e3528e6f775c68a0a17b03c8 128 SUPERFAMILY SSF46689 10 58 7.7E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_591 94cb87a8e3528e6f775c68a0a17b03c8 128 SUPERFAMILY SSF46689 60 110 1.93E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_591 94cb87a8e3528e6f775c68a0a17b03c8 128 Pfam PF12833 Helix-turn-helix domain 30 108 1.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_591 94cb87a8e3528e6f775c68a0a17b03c8 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 1.4E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_591 94cb87a8e3528e6f775c68a0a17b03c8 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 1.4E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_591 94cb87a8e3528e6f775c68a0a17b03c8 128 SMART SM00342 24 107 9.2E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_771 fbed8d8975d0969566097e6521df7627 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 139 2.0E-29 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BD65_771 fbed8d8975d0969566097e6521df7627 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain BD65_771 fbed8d8975d0969566097e6521df7627 377 Gene3D G3DSA:3.30.1340.10 286 370 1.7E-25 T 14-10-2018 IPR035895 HPr-like superfamily BD65_771 fbed8d8975d0969566097e6521df7627 377 SUPERFAMILY SSF55804 2 140 2.22E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BD65_771 fbed8d8975d0969566097e6521df7627 377 Gene3D G3DSA:3.40.930.10 1 143 1.2E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BD65_771 fbed8d8975d0969566097e6521df7627 377 Pfam PF00381 PTS HPr component phosphorylation site 287 368 8.3E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_771 fbed8d8975d0969566097e6521df7627 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BD65_771 fbed8d8975d0969566097e6521df7627 377 SUPERFAMILY SSF55594 287 375 3.27E-23 T 14-10-2018 IPR035895 HPr-like superfamily BD65_771 fbed8d8975d0969566097e6521df7627 377 SUPERFAMILY SSF55804 148 276 2.62E-12 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BD65_771 fbed8d8975d0969566097e6521df7627 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BD65_771 fbed8d8975d0969566097e6521df7627 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 3.3E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_771 fbed8d8975d0969566097e6521df7627 377 PRINTS PR00107 Phosphocarrier protein signature 325 340 7.8E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_771 fbed8d8975d0969566097e6521df7627 377 PRINTS PR00107 Phosphocarrier protein signature 340 357 7.8E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_771 fbed8d8975d0969566097e6521df7627 377 PRINTS PR00107 Phosphocarrier protein signature 297 313 7.8E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 SUPERFAMILY SSF46785 5 67 6.83E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.3E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.3E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.3E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 4.3E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 8.7E-15 T 14-10-2018 BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 SUPERFAMILY SSF54909 68 153 2.28E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 Gene3D G3DSA:3.30.70.920 59 141 2.9E-35 T 14-10-2018 BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 SMART SM00344 7 114 5.9E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BD65_1978 ed2a0683dc6e61ab7e2d3daa07cf8ad3 153 Gene3D G3DSA:1.10.10.10 3 57 1.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_901 cc92ae203596498ba71d5574c454af71 436 Gene3D G3DSA:3.40.47.10 7 435 7.2E-116 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_901 cc92ae203596498ba71d5574c454af71 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 1.5E-36 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BD65_901 cc92ae203596498ba71d5574c454af71 436 PIRSF PIRSF000429 9 436 1.3E-124 T 14-10-2018 IPR002155 Thiolase GO:0016747 BD65_901 cc92ae203596498ba71d5574c454af71 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BD65_901 cc92ae203596498ba71d5574c454af71 436 SUPERFAMILY SSF53901 15 295 1.24E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_901 cc92ae203596498ba71d5574c454af71 436 SUPERFAMILY SSF53901 297 435 1.22E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_901 cc92ae203596498ba71d5574c454af71 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 9.7E-63 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BD65_901 cc92ae203596498ba71d5574c454af71 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 2.4E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 BD65_901 cc92ae203596498ba71d5574c454af71 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BD65_901 cc92ae203596498ba71d5574c454af71 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 69.931 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BD65_901 cc92ae203596498ba71d5574c454af71 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 3.6E-253 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BD65_901 cc92ae203596498ba71d5574c454af71 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 BD65_1141 3c25961c83dd3a9f869d44715da24044 323 Gene3D G3DSA:1.10.620.20 6 292 1.9E-111 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 BD65_1141 3c25961c83dd3a9f869d44715da24044 323 PIRSF PIRSF000355 4 320 6.2E-81 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1141 3c25961c83dd3a9f869d44715da24044 323 Pfam PF00268 Ribonucleotide reductase, small chain 13 277 3.4E-85 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1141 3c25961c83dd3a9f869d44715da24044 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 10 323 1.0E-143 T 14-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1141 3c25961c83dd3a9f869d44715da24044 323 SUPERFAMILY SSF47240 9 323 6.2E-103 T 14-10-2018 IPR009078 Ferritin-like superfamily BD65_1141 3c25961c83dd3a9f869d44715da24044 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 101 117 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1977 04faeab588dcbcd991bcc4f6fd582e8c 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 2.5E-185 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 BD65_1977 04faeab588dcbcd991bcc4f6fd582e8c 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.349 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 BD65_1977 04faeab588dcbcd991bcc4f6fd582e8c 330 SUPERFAMILY SSF55681 5 325 2.95E-96 T 14-10-2018 BD65_1977 04faeab588dcbcd991bcc4f6fd582e8c 330 PIRSF PIRSF001555 1 329 9.0E-154 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 BD65_1977 04faeab588dcbcd991bcc4f6fd582e8c 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 6.9E-94 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 BD65_1977 04faeab588dcbcd991bcc4f6fd582e8c 330 Gene3D G3DSA:3.30.930.10 1 330 1.0E-141 T 14-10-2018 BD65_1981 06781c334a371d208032ad69642c4580 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 1.0E-61 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BD65_1981 06781c334a371d208032ad69642c4580 206 Gene3D G3DSA:3.40.50.150 1 205 2.4E-72 T 14-10-2018 BD65_1981 06781c334a371d208032ad69642c4580 206 SUPERFAMILY SSF53335 4 204 1.69E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1981 06781c334a371d208032ad69642c4580 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.92 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BD65_1981 06781c334a371d208032ad69642c4580 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 204 4.3E-58 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BD65_1981 06781c334a371d208032ad69642c4580 206 PIRSF PIRSF003078 1 206 5.4E-63 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.416 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 Gene3D G3DSA:2.40.50.140 563 675 3.5E-29 T 14-10-2018 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 SUPERFAMILY SSF47323 390 544 2.18E-43 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 Pfam PF01588 Putative tRNA binding domain 579 672 1.1E-20 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 Gene3D G3DSA:1.10.730.10 389 526 2.7E-33 T 14-10-2018 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 Pfam PF09334 tRNA synthetases class I (M) 9 396 5.3E-165 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 SUPERFAMILY SSF50249 568 674 4.9E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 SUPERFAMILY SSF52374 6 387 7.84E-104 T 14-10-2018 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 2.0E-201 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 SUPERFAMILY SSF57770 142 176 7.98E-13 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 Gene3D G3DSA:3.40.50.620 9 384 2.3E-163 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 555 675 7.2E-43 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BD65_3157 e8585a7d96ca5b797a07faa576fc53b5 675 Gene3D G3DSA:2.20.28.20 142 176 2.3E-163 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_1930 fc20853715cc8d28e6d9745c64b40d72 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1930 fc20853715cc8d28e6d9745c64b40d72 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1930 fc20853715cc8d28e6d9745c64b40d72 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1930 fc20853715cc8d28e6d9745c64b40d72 304 Pfam PF03466 LysR substrate binding domain 89 290 7.2E-35 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1930 fc20853715cc8d28e6d9745c64b40d72 304 Gene3D G3DSA:3.40.190.290 92 297 4.3E-33 T 14-10-2018 BD65_1930 fc20853715cc8d28e6d9745c64b40d72 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1930 fc20853715cc8d28e6d9745c64b40d72 304 SUPERFAMILY SSF46785 3 111 1.89E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1930 fc20853715cc8d28e6d9745c64b40d72 304 Gene3D G3DSA:1.10.10.10 3 91 4.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1930 fc20853715cc8d28e6d9745c64b40d72 304 SUPERFAMILY SSF53850 90 293 3.26E-32 T 14-10-2018 BD65_1589 1970b3dd842345ab191e68e9d9fa8f85 370 SMART SM00382 28 211 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1589 1970b3dd842345ab191e68e9d9fa8f85 370 Gene3D G3DSA:2.40.50.140 291 345 7.6E-29 T 14-10-2018 BD65_1589 1970b3dd842345ab191e68e9d9fa8f85 370 SUPERFAMILY SSF52540 4 243 1.08E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1589 1970b3dd842345ab191e68e9d9fa8f85 370 Pfam PF00005 ABC transporter 20 161 1.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1589 1970b3dd842345ab191e68e9d9fa8f85 370 Gene3D G3DSA:3.40.50.300 1 238 2.5E-75 T 14-10-2018 BD65_1589 1970b3dd842345ab191e68e9d9fa8f85 370 Pfam PF08402 TOBE domain 281 353 6.5E-10 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BD65_1589 1970b3dd842345ab191e68e9d9fa8f85 370 Gene3D G3DSA:2.40.50.100 239 290 1.8E-18 T 14-10-2018 BD65_1589 1970b3dd842345ab191e68e9d9fa8f85 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1589 1970b3dd842345ab191e68e9d9fa8f85 370 SUPERFAMILY SSF50331 236 362 3.19E-30 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BD65_2520 3b368c58aadc446e937212cfa23a8d45 287 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.303 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BD65_2520 3b368c58aadc446e937212cfa23a8d45 287 Pfam PF00149 Calcineurin-like phosphoesterase 2 127 1.5E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BD65_2520 3b368c58aadc446e937212cfa23a8d45 287 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 277 8.2E-152 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BD65_2520 3b368c58aadc446e937212cfa23a8d45 287 Gene3D G3DSA:3.60.21.10 1 280 1.9E-81 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BD65_2520 3b368c58aadc446e937212cfa23a8d45 287 PIRSF PIRSF000903 1 275 2.0E-123 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BD65_2520 3b368c58aadc446e937212cfa23a8d45 287 SUPERFAMILY SSF56300 1 259 9.17E-56 T 14-10-2018 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 Gene3D G3DSA:3.40.50.261 131 283 1.9E-46 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 Pfam PF00583 Acetyltransferase (GNAT) family 762 863 2.1E-10 T 14-10-2018 IPR000182 GNAT domain BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 SUPERFAMILY SSF52210 125 286 6.15E-36 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 SUPERFAMILY SSF51735 2 136 1.48E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 SMART SM00881 9 104 1.7E-21 T 14-10-2018 IPR003781 CoA-binding GO:0048037 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 Pfam PF13549 ATP-grasp domain 472 694 6.0E-74 T 14-10-2018 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 Pfam PF13380 CoA binding domain 13 129 3.7E-20 T 14-10-2018 IPR003781 CoA-binding GO:0048037 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 Gene3D G3DSA:3.40.630.30 717 880 1.1E-40 T 14-10-2018 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 Gene3D G3DSA:3.40.50.720 2 130 1.8E-29 T 14-10-2018 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 Gene3D G3DSA:3.30.1490.20 499 576 1.7E-56 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 SUPERFAMILY SSF55729 728 867 6.13E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 SUPERFAMILY SSF52210 287 447 8.77E-36 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 Gene3D G3DSA:3.30.470.20 479 690 1.7E-56 T 14-10-2018 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 Gene3D G3DSA:3.40.50.261 285 455 7.4E-44 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 SUPERFAMILY SSF56059 481 687 7.07E-27 T 14-10-2018 BD65_1154 c407c93c58c89dc540ddae8ec85beea3 880 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 1.1E-44 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 43.314 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 PIRSF PIRSF005901 1 190 9.6E-60 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 SUPERFAMILY SSF50104 1 64 1.93E-10 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 SUPERFAMILY SSF50249 67 130 2.57E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 1.7E-98 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 SUPERFAMILY SSF50249 132 189 1.88E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 Gene3D G3DSA:2.40.50.140 66 130 9.3E-16 T 14-10-2018 BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 Gene3D G3DSA:2.30.30.30 1 65 1.2E-14 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 3.4E-14 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 SMART SM01185 69 125 1.5E-14 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 Gene3D G3DSA:2.40.50.140 132 189 9.3E-20 T 14-10-2018 BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 SMART SM00841 133 188 3.3E-24 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 61 3.3E-16 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like BD65_777 7f142e61aada1417bd8c7282dc9312e8 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.1E-17 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BD65_1381 f483c89abd82630435eaff0655f924f6 631 Gene3D G3DSA:3.30.565.10 3 216 4.7E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1381 f483c89abd82630435eaff0655f924f6 631 Gene3D G3DSA:3.30.230.10 217 390 3.2E-58 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 9.2E-158 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 SUPERFAMILY SSF56719 389 622 5.75E-77 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BD65_1381 f483c89abd82630435eaff0655f924f6 631 Pfam PF00204 DNA gyrase B 219 385 3.2E-39 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_1381 f483c89abd82630435eaff0655f924f6 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 SMART SM00387 28 174 4.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1381 f483c89abd82630435eaff0655f924f6 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 2.7E-24 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_1381 f483c89abd82630435eaff0655f924f6 631 SUPERFAMILY SSF55874 6 216 6.57E-69 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1381 f483c89abd82630435eaff0655f924f6 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 3.0E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1381 f483c89abd82630435eaff0655f924f6 631 SUPERFAMILY SSF54211 218 383 1.06E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_1381 f483c89abd82630435eaff0655f924f6 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.128 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1381 f483c89abd82630435eaff0655f924f6 631 SMART SM00433 35 625 8.4E-207 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_1381 f483c89abd82630435eaff0655f924f6 631 Pfam PF01751 Toprim domain 414 523 4.9E-12 T 14-10-2018 IPR006171 TOPRIM domain BD65_1381 f483c89abd82630435eaff0655f924f6 631 Gene3D G3DSA:3.40.50.670 391 624 1.2E-93 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 7.5E-59 T 14-10-2018 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 7.5E-59 T 14-10-2018 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 7.5E-59 T 14-10-2018 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 7.5E-59 T 14-10-2018 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 7.5E-59 T 14-10-2018 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 7.5E-59 T 14-10-2018 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 7.5E-59 T 14-10-2018 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 7.5E-59 T 14-10-2018 BD65_1381 f483c89abd82630435eaff0655f924f6 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 7.5E-59 T 14-10-2018 BD65_402 8bfd16310769985eaf3d73d7aa42bcfd 465 SUPERFAMILY SSF52540 7 194 3.44E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_402 8bfd16310769985eaf3d73d7aa42bcfd 465 Pfam PF04317 YcjX-like family, DUF463 20 464 2.6E-187 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein BD65_402 8bfd16310769985eaf3d73d7aa42bcfd 465 PIRSF PIRSF019381 1 465 3.7E-217 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein BD65_881 adff1a87a2092c28fe77e51b90365ead 311 SUPERFAMILY SSF103481 42 138 2.75E-10 T 14-10-2018 BD65_881 adff1a87a2092c28fe77e51b90365ead 311 SUPERFAMILY SSF103481 187 283 4.58E-13 T 14-10-2018 BD65_881 adff1a87a2092c28fe77e51b90365ead 311 Pfam PF00892 EamA-like transporter family 150 280 2.5E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_881 adff1a87a2092c28fe77e51b90365ead 311 Pfam PF00892 EamA-like transporter family 4 135 1.6E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 Gene3D G3DSA:3.30.70.890 168 277 2.9E-98 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 PRINTS PR00958 Homoserine kinase signature 254 269 6.8E-33 T 14-10-2018 BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 PRINTS PR00958 Homoserine kinase signature 175 192 6.8E-33 T 14-10-2018 BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 PRINTS PR00958 Homoserine kinase signature 137 150 6.8E-33 T 14-10-2018 BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 PRINTS PR00958 Homoserine kinase signature 9 24 6.8E-33 T 14-10-2018 BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 PRINTS PR00958 Homoserine kinase signature 97 112 6.8E-33 T 14-10-2018 BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 307 2.4E-113 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 Pfam PF00288 GHMP kinases N terminal domain 84 150 5.1E-14 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 SUPERFAMILY SSF55060 173 288 1.76E-31 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 SUPERFAMILY SSF54211 1 161 7.21E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 Gene3D G3DSA:3.30.230.10 4 167 2.9E-98 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 Pfam PF08544 GHMP kinases C terminal 224 285 2.5E-7 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 PIRSF PIRSF000676 1 308 2.5E-84 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BD65_2493 5ca1c7b8fa4d776384413ee3617ff941 309 Hamap MF_00384 Homoserine kinase [thrB]. 4 308 28.417 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BD65_2216 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Gene3D G3DSA:1.10.287.310 1 63 8.5E-30 T 14-10-2018 BD65_2216 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.366 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2216 8b2fd8a4265bcf8859aa63a35e3fcda4 63 SUPERFAMILY SSF46561 1 61 1.03E-21 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2216 8b2fd8a4265bcf8859aa63a35e3fcda4 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.4E-22 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2216 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.3E-22 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_787 9ef73f979d0f75d97ca8492fb897a144 341 SUPERFAMILY SSF161098 136 321 7.19E-17 T 14-10-2018 IPR035906 MetI-like superfamily BD65_787 9ef73f979d0f75d97ca8492fb897a144 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 12 46 1.9E-7 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BD65_787 9ef73f979d0f75d97ca8492fb897a144 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 1.3E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_787 9ef73f979d0f75d97ca8492fb897a144 341 Gene3D G3DSA:1.10.3720.10 130 335 1.1E-14 T 14-10-2018 IPR035906 MetI-like superfamily BD65_788 1f6d2421c442255f1741cde2a51204cf 531 Pfam PF00005 ABC transporter 305 455 1.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_788 1f6d2421c442255f1741cde2a51204cf 531 Gene3D G3DSA:3.40.50.300 275 531 2.4E-82 T 14-10-2018 BD65_788 1f6d2421c442255f1741cde2a51204cf 531 Gene3D G3DSA:3.40.50.300 5 270 1.1E-80 T 14-10-2018 BD65_788 1f6d2421c442255f1741cde2a51204cf 531 SUPERFAMILY SSF52540 7 258 6.66E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_788 1f6d2421c442255f1741cde2a51204cf 531 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 265 1.1E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_788 1f6d2421c442255f1741cde2a51204cf 531 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_788 1f6d2421c442255f1741cde2a51204cf 531 SMART SM00382 36 236 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_788 1f6d2421c442255f1741cde2a51204cf 531 SMART SM00382 313 503 1.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_788 1f6d2421c442255f1741cde2a51204cf 531 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_788 1f6d2421c442255f1741cde2a51204cf 531 SUPERFAMILY SSF52540 277 526 4.11E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_788 1f6d2421c442255f1741cde2a51204cf 531 Pfam PF00005 ABC transporter 28 186 1.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1683 f90f8d8605f803e027a059c4962ade7e 260 Pfam PF01026 TatD related DNase 2 257 3.4E-67 T 14-10-2018 IPR001130 TatD family GO:0016788 BD65_1683 f90f8d8605f803e027a059c4962ade7e 260 PIRSF PIRSF005902 1 260 2.4E-71 T 14-10-2018 IPR001130 TatD family GO:0016788 BD65_1683 f90f8d8605f803e027a059c4962ade7e 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BD65_1683 f90f8d8605f803e027a059c4962ade7e 260 Gene3D G3DSA:3.20.20.140 1 260 5.7E-95 T 14-10-2018 BD65_1683 f90f8d8605f803e027a059c4962ade7e 260 SUPERFAMILY SSF51556 1 259 2.43E-79 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_1683 f90f8d8605f803e027a059c4962ade7e 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 260 63.748 T 14-10-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 BD65_1683 f90f8d8605f803e027a059c4962ade7e 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.504 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 SUPERFAMILY SSF56053 1 82 2.49E-22 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 PIRSF PIRSF002162 1 177 7.0E-44 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 Pfam PF00347 Ribosomal protein L6 11 82 7.5E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 Pfam PF00347 Ribosomal protein L6 90 164 6.6E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 SUPERFAMILY SSF56053 83 177 9.08E-36 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.5E-72 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 Gene3D G3DSA:3.90.930.12 83 177 9.7E-40 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2223 536bc8cad3f2f2b8e2ea2cd541d33e09 177 Gene3D G3DSA:3.90.930.12 1 82 7.7E-29 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2404 26f11db1855509f54f4767a7a6be664a 544 SUPERFAMILY SSF52402 36 225 3.35E-18 T 14-10-2018 BD65_2404 26f11db1855509f54f4767a7a6be664a 544 Gene3D G3DSA:3.40.50.620 17 232 2.1E-33 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2404 26f11db1855509f54f4767a7a6be664a 544 TIGRFAM TIGR03183 DNA_S_dndC: putative sulfurtransferase DndC 32 485 4.5E-160 T 14-10-2018 IPR017598 Sulphur transferase DndC, putative BD65_2404 26f11db1855509f54f4767a7a6be664a 544 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 46 225 1.6E-8 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 BD65_2467 b007808081e273fec1644a92f2a1def0 145 Pfam PF03603 DNA polymerase III psi subunit 3 127 1.3E-48 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2467 b007808081e273fec1644a92f2a1def0 145 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 2.0E-37 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2467 b007808081e273fec1644a92f2a1def0 145 SUPERFAMILY SSF102220 27 135 3.66E-35 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2467 b007808081e273fec1644a92f2a1def0 145 PIRSF PIRSF029225 2 131 3.5E-52 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2467 b007808081e273fec1644a92f2a1def0 145 Gene3D G3DSA:3.40.50.10220 33 137 3.9E-38 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_3183 a24d48ddbec35f77d75fb6d0c5cacb81 345 PRINTS PR00682 Isopenicillin N synthase signature 203 224 2.4E-12 T 14-10-2018 BD65_3183 a24d48ddbec35f77d75fb6d0c5cacb81 345 PRINTS PR00682 Isopenicillin N synthase signature 32 49 2.4E-12 T 14-10-2018 BD65_3183 a24d48ddbec35f77d75fb6d0c5cacb81 345 PRINTS PR00682 Isopenicillin N synthase signature 239 265 2.4E-12 T 14-10-2018 BD65_3183 a24d48ddbec35f77d75fb6d0c5cacb81 345 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 182 278 2.7E-19 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BD65_3183 a24d48ddbec35f77d75fb6d0c5cacb81 345 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 10 133 5.3E-36 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain BD65_3183 a24d48ddbec35f77d75fb6d0c5cacb81 345 SUPERFAMILY SSF51197 6 289 1.92E-81 T 14-10-2018 BD65_3183 a24d48ddbec35f77d75fb6d0c5cacb81 345 Gene3D G3DSA:2.60.120.330 3 323 1.2E-82 T 14-10-2018 IPR027443 Isopenicillin N synthase-like BD65_1161 753f5ce9f7d70b486fd500e34e086304 188 PIRSF PIRSF004682 1 188 2.7E-63 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 BD65_1161 753f5ce9f7d70b486fd500e34e086304 188 Gene3D G3DSA:3.40.50.1000 4 188 6.8E-63 T 14-10-2018 IPR023214 HAD superfamily BD65_1161 753f5ce9f7d70b486fd500e34e086304 188 SUPERFAMILY SSF56784 3 183 1.49E-50 T 14-10-2018 IPR036412 HAD-like superfamily BD65_1161 753f5ce9f7d70b486fd500e34e086304 188 Pfam PF13242 HAD-hyrolase-like 109 178 1.4E-10 T 14-10-2018 BD65_1161 753f5ce9f7d70b486fd500e34e086304 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 154 2.0E-37 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BD65_1161 753f5ce9f7d70b486fd500e34e086304 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 153 1.3E-38 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 BD65_1161 753f5ce9f7d70b486fd500e34e086304 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 4.2E-91 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 BD65_2731 875c020c45aa28c33edc417a9931adbd 359 SUPERFAMILY SSF51569 9 346 5.68E-134 T 14-10-2018 BD65_2731 875c020c45aa28c33edc417a9931adbd 359 Gene3D G3DSA:3.20.20.70 3 350 5.0E-154 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2731 875c020c45aa28c33edc417a9931adbd 359 PIRSF PIRSF001361 1 354 6.5E-162 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BD65_2731 875c020c45aa28c33edc417a9931adbd 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 348 9.3E-166 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BD65_2731 875c020c45aa28c33edc417a9931adbd 359 Pfam PF00793 DAHP synthetase I family 40 340 3.2E-104 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BD65_1094 132880f370ec5bd45fe52eb90b37854f 127 SUPERFAMILY SSF51998 27 125 2.24E-24 T 14-10-2018 BD65_1094 132880f370ec5bd45fe52eb90b37854f 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 42.298 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA BD65_1094 132880f370ec5bd45fe52eb90b37854f 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BD65_1094 132880f370ec5bd45fe52eb90b37854f 127 Gene3D G3DSA:3.20.70.20 54 127 4.7E-25 T 14-10-2018 BD65_1094 132880f370ec5bd45fe52eb90b37854f 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 2.1E-72 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA BD65_1094 132880f370ec5bd45fe52eb90b37854f 127 Pfam PF01228 Glycine radical 14 108 2.0E-23 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 BD65_1094 132880f370ec5bd45fe52eb90b37854f 127 PIRSF PIRSF000378 2 127 3.7E-55 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA BD65_2812 f62b3f6425d646aa5e617f15c03cde5f 93 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 33 65 3.0E-11 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BD65_2812 f62b3f6425d646aa5e617f15c03cde5f 93 Gene3D G3DSA:1.10.287.1040 17 93 1.0E-24 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 BD65_2812 f62b3f6425d646aa5e617f15c03cde5f 93 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 23 78 7.5E-23 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BD65_2812 f62b3f6425d646aa5e617f15c03cde5f 93 Pfam PF02609 Exonuclease VII small subunit 24 75 7.2E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BD65_2812 f62b3f6425d646aa5e617f15c03cde5f 93 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 23 83 16.472 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BD65_2812 f62b3f6425d646aa5e617f15c03cde5f 93 SUPERFAMILY SSF116842 18 86 1.11E-20 T 14-10-2018 BD65_2812 f62b3f6425d646aa5e617f15c03cde5f 93 PIRSF PIRSF006488 8 93 6.6E-23 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BD65_921 54bb0341d32b0f9ac3c2048531ea5cef 415 Gene3D G3DSA:2.60.120.330 1 415 3.8E-162 T 14-10-2018 IPR027443 Isopenicillin N synthase-like BD65_921 54bb0341d32b0f9ac3c2048531ea5cef 415 SUPERFAMILY SSF51197 3 413 9.61E-148 T 14-10-2018 BD65_921 54bb0341d32b0f9ac3c2048531ea5cef 415 Pfam PF07350 Protein of unknown function (DUF1479) 8 412 5.7E-141 T 14-10-2018 IPR010856 Protein of unknown function DUF1479 BD65_118 e68bb5ee99cb9e10bcfbd52334298569 335 PIRSF PIRSF000267 1 335 1.1E-88 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BD65_118 e68bb5ee99cb9e10bcfbd52334298569 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 9.8E-100 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BD65_118 e68bb5ee99cb9e10bcfbd52334298569 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 212 6.9E-43 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 302 4.4E-68 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 PIRSF PIRSF039102 41 306 2.4E-93 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 PIRSF PIRSF039102 1 45 1.2E-7 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 1.7E-108 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 Gene3D G3DSA:3.40.50.20 1 84 9.4E-32 T 14-10-2018 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.931 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 Gene3D G3DSA:3.30.1490.20 111 183 1.7E-85 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 Gene3D G3DSA:3.30.470.20 85 301 1.7E-85 T 14-10-2018 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 SUPERFAMILY SSF52440 3 96 3.55E-29 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 7.5E-18 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 SUPERFAMILY SSF56059 97 302 6.23E-59 T 14-10-2018 BD65_2558 ac443f4fc91499c41b9510c025fea4f1 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_1147 acb37ffe59ac406d441c0c46cc63bf54 170 SUPERFAMILY SSF46785 21 165 1.4E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1147 acb37ffe59ac406d441c0c46cc63bf54 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 3.7E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_1147 acb37ffe59ac406d441c0c46cc63bf54 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 3.7E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_1147 acb37ffe59ac406d441c0c46cc63bf54 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 3.7E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_1147 acb37ffe59ac406d441c0c46cc63bf54 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 3.7E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_1147 acb37ffe59ac406d441c0c46cc63bf54 170 Pfam PF01047 MarR family 53 112 2.6E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_1147 acb37ffe59ac406d441c0c46cc63bf54 170 Gene3D G3DSA:1.10.10.10 10 164 3.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1147 acb37ffe59ac406d441c0c46cc63bf54 170 SMART SM00347 46 148 3.2E-32 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_1147 acb37ffe59ac406d441c0c46cc63bf54 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 348 430 2.1E-26 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 Gene3D G3DSA:1.20.1440.230 343 443 4.9E-28 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 SUPERFAMILY SSF142019 20 252 2.48E-85 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 Gene3D G3DSA:3.10.20.600 248 342 5.6E-28 T 14-10-2018 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 358 369 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 SUPERFAMILY SSF140490 343 435 1.83E-31 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 61 233 3.2E-50 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 Gene3D G3DSA:3.40.50.11540 66 245 2.0E-78 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 SMART SM00928 345 390 4.3E-22 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 SUPERFAMILY SSF142984 257 339 1.1E-21 T 14-10-2018 BD65_843 7ff28c34beabe9e6908fac58b38b6080 455 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 432 1.9E-200 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_159 b6535fbaa148e6651dea7ba8fb518cf5 313 Gene3D G3DSA:3.40.50.720 95 279 4.8E-109 T 14-10-2018 BD65_159 b6535fbaa148e6651dea7ba8fb518cf5 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 278 7.1E-43 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BD65_159 b6535fbaa148e6651dea7ba8fb518cf5 313 Gene3D G3DSA:3.40.50.720 15 308 4.8E-109 T 14-10-2018 BD65_159 b6535fbaa148e6651dea7ba8fb518cf5 313 SUPERFAMILY SSF51735 99 279 3.95E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.1E-6 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.1E-6 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.1E-6 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 SUPERFAMILY SSF52402 197 420 1.04E-55 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 SUPERFAMILY SSF54810 405 525 2.22E-51 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 3.9E-82 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 Gene3D G3DSA:3.40.50.880 9 206 1.0E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 Pfam PF00958 GMP synthase C terminal domain 433 524 7.8E-44 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 8.9E-8 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 8.9E-8 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 8.9E-8 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 SUPERFAMILY SSF52317 4 204 1.27E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 2.3E-153 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.1E-6 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.1E-6 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.1E-6 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.583 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 7.9E-40 T 14-10-2018 IPR017926 Glutamine amidotransferase BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 Gene3D G3DSA:3.40.50.620 209 405 3.0E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 Gene3D G3DSA:3.30.300.10 406 525 2.0E-51 T 14-10-2018 BD65_1024 32db78a50a5ba647f6dfe54674c00cf2 525 Pfam PF02540 NAD synthase 223 257 5.3E-6 T 14-10-2018 IPR022310 NAD/GMP synthase BD65_3003 62d3a4a9622680a3a585dc23e805a3b0 175 Pfam PF00258 Flavodoxin 6 160 1.4E-32 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BD65_3003 62d3a4a9622680a3a585dc23e805a3b0 175 Gene3D G3DSA:3.40.50.360 2 175 1.0E-58 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_3003 62d3a4a9622680a3a585dc23e805a3b0 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 BD65_3003 62d3a4a9622680a3a585dc23e805a3b0 175 PIRSF PIRSF038996 1 172 1.2E-70 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 BD65_3003 62d3a4a9622680a3a585dc23e805a3b0 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 5.7E-77 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 BD65_3003 62d3a4a9622680a3a585dc23e805a3b0 175 SUPERFAMILY SSF52218 4 169 2.38E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 PIRSF PIRSF001220 1 334 2.3E-96 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 PIRSF PIRSF500176 2 332 2.1E-112 T 14-10-2018 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 Gene3D G3DSA:3.40.50.1170 1 208 3.9E-89 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 Pfam PF00710 Asparaginase, N-terminal 6 187 1.4E-62 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.1E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.1E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.1E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 Gene3D G3DSA:3.40.50.40 209 337 5.1E-48 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 SUPERFAMILY SSF53774 3 335 1.83E-110 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 6.9E-128 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 BD65_231 80ab8fc1c617218c7e1605e3dcca2333 338 SMART SM00870 5 323 1.3E-137 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BD65_2678 e849c1e76acee2e877d61067a0139351 164 Pfam PF07720 Tetratricopeptide repeat 44 74 4.4E-10 T 14-10-2018 IPR011716 Tetratricopeptide TPR-3 BD65_2678 e849c1e76acee2e877d61067a0139351 164 Pfam PF07720 Tetratricopeptide repeat 75 108 1.7E-10 T 14-10-2018 IPR011716 Tetratricopeptide TPR-3 BD65_2678 e849c1e76acee2e877d61067a0139351 164 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 52 71 1.5E-13 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD BD65_2678 e849c1e76acee2e877d61067a0139351 164 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 76 98 1.5E-13 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD BD65_2678 e849c1e76acee2e877d61067a0139351 164 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 108 130 1.5E-13 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD BD65_2678 e849c1e76acee2e877d61067a0139351 164 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 27 50 1.5E-13 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD BD65_2678 e849c1e76acee2e877d61067a0139351 164 PIRSF PIRSF003165 4 164 1.9E-58 T 14-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup BD65_2678 e849c1e76acee2e877d61067a0139351 164 SUPERFAMILY SSF48452 44 138 4.49E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2678 e849c1e76acee2e877d61067a0139351 164 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 26 155 3.3E-38 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD BD65_2678 e849c1e76acee2e877d61067a0139351 164 Gene3D G3DSA:1.25.40.10 11 160 1.3E-53 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2777 0365158bf504ea3d2bb635fd88d656ac 89 Gene3D G3DSA:3.30.1660.10 20 89 3.0E-20 T 14-10-2018 IPR025543 Dodecin-like BD65_2777 0365158bf504ea3d2bb635fd88d656ac 89 SUPERFAMILY SSF159871 1 89 3.53E-23 T 14-10-2018 IPR036275 YdgH-like superfamily BD65_2777 0365158bf504ea3d2bb635fd88d656ac 89 Pfam PF07338 Protein of unknown function (DUF1471) 34 89 8.9E-16 T 14-10-2018 IPR010854 Domain of unknown function DUF1471 BD65_2294 0b7c099a3926ab3cb900924e093752d0 101 SUPERFAMILY SSF50182 7 69 5.02E-24 T 14-10-2018 IPR010920 LSM domain superfamily BD65_2294 0b7c099a3926ab3cb900924e093752d0 101 Pfam PF17209 Hfq protein 7 69 7.8E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BD65_2294 0b7c099a3926ab3cb900924e093752d0 101 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.8E-29 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BD65_2294 0b7c099a3926ab3cb900924e093752d0 101 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.244 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BD65_2294 0b7c099a3926ab3cb900924e093752d0 101 Gene3D G3DSA:2.30.30.100 1 72 1.5E-34 T 14-10-2018 BD65_87 7eb9568d315ed8f70bd1423e472c4e22 371 Gene3D G3DSA:3.40.50.620 1 213 1.3E-96 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_87 7eb9568d315ed8f70bd1423e472c4e22 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 1.9E-155 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BD65_87 7eb9568d315ed8f70bd1423e472c4e22 371 Pfam PF03054 tRNA methyl transferase 7 361 9.0E-143 T 14-10-2018 BD65_87 7eb9568d315ed8f70bd1423e472c4e22 371 SUPERFAMILY SSF52402 5 245 2.14E-56 T 14-10-2018 BD65_87 7eb9568d315ed8f70bd1423e472c4e22 371 Gene3D G3DSA:2.40.30.10 283 369 2.5E-32 T 14-10-2018 BD65_87 7eb9568d315ed8f70bd1423e472c4e22 371 Gene3D G3DSA:2.30.30.280 214 282 6.0E-28 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BD65_87 7eb9568d315ed8f70bd1423e472c4e22 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.662 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BD65_3071 e4c836b6e0c6bb0b84cf492a74f21db5 384 Gene3D G3DSA:3.40.640.10 57 284 1.5E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_3071 e4c836b6e0c6bb0b84cf492a74f21db5 384 Pfam PF00155 Aminotransferase class I and II 41 378 1.4E-63 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BD65_3071 e4c836b6e0c6bb0b84cf492a74f21db5 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 BD65_3071 e4c836b6e0c6bb0b84cf492a74f21db5 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 378 2.7E-138 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BD65_3071 e4c836b6e0c6bb0b84cf492a74f21db5 384 SUPERFAMILY SSF53383 3 378 1.77E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_3071 e4c836b6e0c6bb0b84cf492a74f21db5 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 48.85 T 14-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BD65_3071 e4c836b6e0c6bb0b84cf492a74f21db5 384 Gene3D G3DSA:3.90.1150.10 40 376 1.5E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1320 12a9df17ec7bb16e7c037bce87d30886 239 Pfam PF02390 Putative methyltransferase 64 233 1.3E-61 T 14-10-2018 BD65_1320 12a9df17ec7bb16e7c037bce87d30886 239 SUPERFAMILY SSF53335 18 237 6.48E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1320 12a9df17ec7bb16e7c037bce87d30886 239 Gene3D G3DSA:3.40.50.150 30 239 3.6E-71 T 14-10-2018 BD65_1320 12a9df17ec7bb16e7c037bce87d30886 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 1.9E-71 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BD65_1320 12a9df17ec7bb16e7c037bce87d30886 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.691 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BD65_2931 b27072fcc9bca669ed9c61274147285a 218 Gene3D G3DSA:1.20.910.10 3 217 3.7E-55 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BD65_2931 b27072fcc9bca669ed9c61274147285a 218 Pfam PF14518 Iron-containing redox enzyme 39 206 6.3E-26 T 14-10-2018 BD65_2931 b27072fcc9bca669ed9c61274147285a 218 SUPERFAMILY SSF48613 1 213 2.09E-60 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BD65_2931 b27072fcc9bca669ed9c61274147285a 218 SMART SM01236 73 170 1.5E-10 T 14-10-2018 BD65_3227 7bd2c5a79e475895dd4d2181a5dd7980 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_3227 7bd2c5a79e475895dd4d2181a5dd7980 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 4.8E-199 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 BD65_3227 7bd2c5a79e475895dd4d2181a5dd7980 588 Gene3D G3DSA:1.20.1560.10 2 334 1.5E-46 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_3227 7bd2c5a79e475895dd4d2181a5dd7980 588 Pfam PF00664 ABC transporter transmembrane region 26 292 5.6E-38 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BD65_3227 7bd2c5a79e475895dd4d2181a5dd7980 588 Gene3D G3DSA:3.40.50.300 344 587 6.2E-67 T 14-10-2018 BD65_3227 7bd2c5a79e475895dd4d2181a5dd7980 588 SUPERFAMILY SSF52540 361 582 3.3E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3227 7bd2c5a79e475895dd4d2181a5dd7980 588 SMART SM00382 375 560 3.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3227 7bd2c5a79e475895dd4d2181a5dd7980 588 SUPERFAMILY SSF90123 11 330 8.11E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_3227 7bd2c5a79e475895dd4d2181a5dd7980 588 Pfam PF00005 ABC transporter 369 514 6.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Pfam PF12826 Helix-hairpin-helix motif 510 573 9.4E-24 T 14-10-2018 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Gene3D G3DSA:1.10.287.610 1 69 3.1E-31 T 14-10-2018 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 9.1E-37 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 SMART SM00292 594 671 1.0E-15 T 14-10-2018 IPR001357 BRCT domain BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 SUPERFAMILY SSF52113 595 669 3.55E-19 T 14-10-2018 IPR036420 BRCT domain superfamily BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 SUPERFAMILY SSF50249 318 399 2.74E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 PIRSF PIRSF001604 1 673 1.8E-258 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 1.8E-12 T 14-10-2018 IPR001357 BRCT domain BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Gene3D G3DSA:2.20.70.80 391 431 1.4E-20 T 14-10-2018 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 SUPERFAMILY SSF47781 403 578 3.48E-61 T 14-10-2018 IPR010994 RuvA domain 2-like BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 6.2E-11 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Hamap MF_01588 DNA ligase [ligA]. 2 668 54.55 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Gene3D G3DSA:3.40.50.10190 585 670 1.8E-26 T 14-10-2018 IPR036420 BRCT domain superfamily BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Pfam PF14520 Helix-hairpin-helix domain 446 502 4.6E-5 T 14-10-2018 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Gene3D G3DSA:2.40.50.140 317 390 2.6E-35 T 14-10-2018 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Gene3D G3DSA:3.30.1490.70 78 316 2.8E-102 T 14-10-2018 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 664 1.9E-270 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 SUPERFAMILY SSF56091 2 316 3.68E-123 T 14-10-2018 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 SMART SM00278 512 531 210.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 SMART SM00278 480 499 1.1 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 SMART SM00278 544 563 12.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 SMART SM00278 446 465 17.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Gene3D G3DSA:3.30.470.30 70 253 2.8E-102 T 14-10-2018 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 4.6E-137 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 SMART SM00532 3 448 5.7E-283 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Gene3D G3DSA:1.10.150.20 506 584 2.4E-29 T 14-10-2018 BD65_942 9e5f840cd6267cd7bd7142506a3dc8f9 674 Gene3D G3DSA:1.10.150.20 432 505 5.9E-30 T 14-10-2018 BD65_2569 5e52411f9c56a84f9f02dd019eea87c1 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.451 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BD65_2569 5e52411f9c56a84f9f02dd019eea87c1 206 SUPERFAMILY SSF52540 1 190 3.88E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2569 5e52411f9c56a84f9f02dd019eea87c1 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 180 6.3E-63 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BD65_2569 5e52411f9c56a84f9f02dd019eea87c1 206 Pfam PF01121 Dephospho-CoA kinase 3 177 5.5E-72 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BD65_2569 5e52411f9c56a84f9f02dd019eea87c1 206 Gene3D G3DSA:3.40.50.300 1 205 2.9E-66 T 14-10-2018 BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 Pfam PF01556 DnaJ C terminal domain 119 331 4.4E-46 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 SUPERFAMILY SSF49493 257 342 1.05E-21 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 Pfam PF00684 DnaJ central domain 145 205 5.0E-16 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 SUPERFAMILY SSF46565 1 105 4.97E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 Gene3D G3DSA:1.10.287.110 1 113 6.4E-38 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 SMART SM00271 4 61 1.2E-28 T 14-10-2018 IPR001623 DnaJ domain BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 PRINTS PR00625 DnaJ domain signature 25 40 1.3E-31 T 14-10-2018 IPR001623 DnaJ domain BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 PRINTS PR00625 DnaJ domain signature 61 80 1.3E-31 T 14-10-2018 IPR001623 DnaJ domain BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 PRINTS PR00625 DnaJ domain signature 7 25 1.3E-31 T 14-10-2018 IPR001623 DnaJ domain BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 PRINTS PR00625 DnaJ domain signature 41 61 1.3E-31 T 14-10-2018 IPR001623 DnaJ domain BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 Pfam PF00226 DnaJ domain 5 66 3.8E-26 T 14-10-2018 IPR001623 DnaJ domain BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 SUPERFAMILY SSF49493 113 260 3.14E-21 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 2.1E-142 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 42.364 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 Gene3D G3DSA:2.60.260.20 255 358 2.8E-29 T 14-10-2018 BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 SUPERFAMILY SSF57938 132 209 4.71E-24 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 14-10-2018 IPR018253 DnaJ domain, conserved site BD65_2502 fa4d20b83ada1aa4a7ae0219b00f3a9b 377 Gene3D G3DSA:2.10.230.10 143 209 1.4E-23 T 14-10-2018 BD65_1922 228d3ac85e9e9e364f076d97feb5cb06 222 Gene3D G3DSA:3.40.140.10 98 222 1.0E-43 T 14-10-2018 BD65_1922 228d3ac85e9e9e364f076d97feb5cb06 222 SUPERFAMILY SSF47781 16 84 1.11E-9 T 14-10-2018 IPR010994 RuvA domain 2-like BD65_1922 228d3ac85e9e9e364f076d97feb5cb06 222 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 222 51.948 T 14-10-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily BD65_1922 228d3ac85e9e9e364f076d97feb5cb06 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 10 222 3.3E-81 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 BD65_1922 228d3ac85e9e9e364f076d97feb5cb06 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 171 176 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site BD65_1922 228d3ac85e9e9e364f076d97feb5cb06 222 Pfam PF04002 RadC-like JAB domain 103 220 1.5E-43 T 14-10-2018 IPR025657 RadC-like JAB domain BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 PIRSF PIRSF037119 397 659 4.1E-103 T 14-10-2018 IPR017116 Signal transduction histidine kinase, PgtB BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 PIRSF PIRSF037119 1 405 7.7E-108 T 14-10-2018 IPR017116 Signal transduction histidine kinase, PgtB BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 Gene3D G3DSA:3.30.565.10 508 658 1.6E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 Pfam PF00512 His Kinase A (phospho-acceptor) domain 442 505 8.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 550 646 2.3E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 Gene3D G3DSA:1.20.1480.50 318 416 2.7E-5 T 14-10-2018 BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 616 3.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 635 3.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 602 3.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 SMART SM00304 357 409 0.0015 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 SMART SM00387 550 657 1.9E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 Gene3D G3DSA:1.10.287.130 417 503 7.5E-16 T 14-10-2018 BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 SMART SM00388 440 508 6.5E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 SUPERFAMILY SSF55874 499 653 2.36E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2815 b32fbd4ea0ff2a7c530ecd935a64de32 661 SUPERFAMILY SSF47384 430 505 1.26E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 2 379 1.1E-118 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 Gene3D G3DSA:3.30.1370.120 89 148 3.2E-8 T 14-10-2018 IPR038591 NolW-like superfamily BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 Pfam PF03958 Bacterial type II/III secretion system short domain 92 150 1.3E-9 T 14-10-2018 IPR005644 NolW-like BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 325 358 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 PRINTS PR01032 Gene IV protein signature 200 223 1.8E-8 T 14-10-2018 BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 PRINTS PR01032 Gene IV protein signature 307 335 1.8E-8 T 14-10-2018 BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 PRINTS PR01032 Gene IV protein signature 360 381 1.8E-8 T 14-10-2018 BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 PRINTS PR01032 Gene IV protein signature 241 264 1.8E-8 T 14-10-2018 BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 Gene3D G3DSA:3.55.50.30 1 85 4.3E-21 T 14-10-2018 BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 PRINTS PR00811 Bacterial general secretion pathway protein D signature 367 381 1.8E-9 T 14-10-2018 IPR001775 GspD/PilQ family BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 PRINTS PR00811 Bacterial general secretion pathway protein D signature 88 98 1.8E-9 T 14-10-2018 IPR001775 GspD/PilQ family BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 PRINTS PR00811 Bacterial general secretion pathway protein D signature 344 362 1.8E-9 T 14-10-2018 IPR001775 GspD/PilQ family BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 Pfam PF00263 Bacterial type II and III secretion system protein 220 379 6.2E-48 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 BD65_2156 947f7fe99fe1d8dacddbaef5b41855c9 381 SMART SM00965 12 59 5.3E-4 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BD65_791 8c9667f4e71e65cf02b7e02bbafa531c 235 SMART SM00363 1 59 3.5E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_791 8c9667f4e71e65cf02b7e02bbafa531c 235 SUPERFAMILY SSF55120 61 227 2.56E-47 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_791 8c9667f4e71e65cf02b7e02bbafa531c 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 1.2E-57 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BD65_791 8c9667f4e71e65cf02b7e02bbafa531c 235 Gene3D G3DSA:3.30.70.580 63 227 1.8E-59 T 14-10-2018 BD65_791 8c9667f4e71e65cf02b7e02bbafa531c 235 SUPERFAMILY SSF55174 1 55 6.92E-12 T 14-10-2018 BD65_791 8c9667f4e71e65cf02b7e02bbafa531c 235 Pfam PF00849 RNA pseudouridylate synthase 62 190 2.7E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_791 8c9667f4e71e65cf02b7e02bbafa531c 235 Gene3D G3DSA:3.10.290.10 1 62 2.3E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BD65_791 8c9667f4e71e65cf02b7e02bbafa531c 235 Pfam PF01479 S4 domain 1 47 3.1E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_791 8c9667f4e71e65cf02b7e02bbafa531c 235 Gene3D G3DSA:3.30.70.1560 128 209 1.8E-59 T 14-10-2018 BD65_791 8c9667f4e71e65cf02b7e02bbafa531c 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BD65_1517 c5d7b92a26c6debe9a268490f03d8178 160 Gene3D G3DSA:3.40.930.10 1 158 1.9E-62 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BD65_1517 c5d7b92a26c6debe9a268490f03d8178 160 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain BD65_1517 c5d7b92a26c6debe9a268490f03d8178 160 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 8 154 1.3E-60 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 BD65_1517 c5d7b92a26c6debe9a268490f03d8178 160 SUPERFAMILY SSF55804 7 154 4.45E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BD65_1517 c5d7b92a26c6debe9a268490f03d8178 160 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 154 9.7E-37 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BD65_944 b66b651cea49b173889cddb117647ecf 255 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 10 250 29.468 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 BD65_944 b66b651cea49b173889cddb117647ecf 255 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 16 232 8.7E-42 T 14-10-2018 BD65_174 b93bf10a37574133ceaadf5e80080574 323 SUPERFAMILY SSF53335 89 316 8.88E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_174 b93bf10a37574133ceaadf5e80080574 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 54.466 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 BD65_174 b93bf10a37574133ceaadf5e80080574 323 Gene3D G3DSA:3.40.50.150 88 323 1.4E-20 T 14-10-2018 BD65_174 b93bf10a37574133ceaadf5e80080574 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 7.0E-165 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like BD65_174 b93bf10a37574133ceaadf5e80080574 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 2.7E-145 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 BD65_647 2f8ebf269222e16d0e706ff3f0536d8d 182 Gene3D G3DSA:1.20.120.1760 4 175 1.5E-14 T 14-10-2018 BD65_647 2f8ebf269222e16d0e706ff3f0536d8d 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 3.2E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BD65_647 2f8ebf269222e16d0e706ff3f0536d8d 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BD65_647 2f8ebf269222e16d0e706ff3f0536d8d 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 2.2E-60 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BD65_647 2f8ebf269222e16d0e706ff3f0536d8d 182 PIRSF PIRSF000847 1 181 2.1E-43 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BD65_374 158f3b0777c5da60292b3daa2ed99260 275 Pfam PF12833 Helix-turn-helix domain 180 257 3.2E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_374 158f3b0777c5da60292b3daa2ed99260 275 SMART SM00342 174 256 1.0E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_374 158f3b0777c5da60292b3daa2ed99260 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 252 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BD65_374 158f3b0777c5da60292b3daa2ed99260 275 Gene3D G3DSA:1.10.10.60 154 268 4.9E-23 T 14-10-2018 BD65_374 158f3b0777c5da60292b3daa2ed99260 275 SUPERFAMILY SSF46689 209 259 1.12E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 SUPERFAMILY SSF50249 138 236 3.43E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 SUPERFAMILY SSF50249 645 725 4.26E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 1.7E-276 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 Gene3D G3DSA:2.40.50.140 646 752 3.2E-23 T 14-10-2018 BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 SUPERFAMILY SSF50249 67 145 2.63E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 726 8.6E-269 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 SMART SM00357 86 145 4.5E-11 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 Pfam PF00773 RNB domain 260 587 1.1E-105 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 Pfam PF00575 S1 RNA binding domain 642 724 2.2E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 Gene3D G3DSA:2.40.50.140 71 148 2.6E-15 T 14-10-2018 BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 SUPERFAMILY SSF50249 222 642 4.23E-141 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 SMART SM00316 643 726 1.8E-12 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 SMART SM00955 260 588 1.9E-181 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 Pfam PF08206 Ribonuclease B OB domain 158 213 6.5E-5 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 Pfam PF08206 Ribonuclease B OB domain 87 144 5.8E-21 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 9.2E-17 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain BD65_2301 29c0ee3e4dfe0cc33538e121efa6b0e6 837 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 56.755 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BD65_891 d52d8f4882bbfdb3b525497f846dcfd2 679 SUPERFAMILY SSF51905 267 668 1.23E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_891 d52d8f4882bbfdb3b525497f846dcfd2 679 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 1.6E-48 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 BD65_891 d52d8f4882bbfdb3b525497f846dcfd2 679 Gene3D G3DSA:3.50.50.60 268 666 5.1E-143 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_891 d52d8f4882bbfdb3b525497f846dcfd2 679 Gene3D G3DSA:3.40.50.150 9 250 5.5E-111 T 14-10-2018 BD65_891 d52d8f4882bbfdb3b525497f846dcfd2 679 Pfam PF01266 FAD dependent oxidoreductase 267 639 3.5E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BD65_891 d52d8f4882bbfdb3b525497f846dcfd2 679 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 664 27.822 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 BD65_891 d52d8f4882bbfdb3b525497f846dcfd2 679 Gene3D G3DSA:3.30.9.10 352 574 5.1E-143 T 14-10-2018 BD65_891 d52d8f4882bbfdb3b525497f846dcfd2 679 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 669 1.8E-155 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 SMART SM00852 183 320 7.3E-44 T 14-10-2018 IPR001453 MoaB/Mog domain BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 Pfam PF00994 Probable molybdopterin binding domain 183 319 3.8E-27 T 14-10-2018 IPR001453 MoaB/Mog domain BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 SUPERFAMILY SSF53218 180 326 3.93E-44 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 316 7.3E-35 T 14-10-2018 IPR001453 MoaB/Mog domain BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 170 7.2E-44 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 Gene3D G3DSA:2.40.340.10 331 401 1.4E-146 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 Gene3D G3DSA:3.40.980.10 28 330 1.4E-146 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 Gene3D G3DSA:3.90.105.10 29 177 1.4E-146 T 14-10-2018 BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 Gene3D G3DSA:2.170.190.11 53 144 1.4E-146 T 14-10-2018 BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 SUPERFAMILY SSF63882 7 178 8.5E-55 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 SUPERFAMILY SSF63867 330 410 1.1E-24 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3133 0fc7c4ee2fda8114200217715a240e2a 412 Pfam PF03454 MoeA C-terminal region (domain IV) 335 406 7.2E-20 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_19 78a9e0c68a3b1b0b0fa128b384043ca8 684 Gene3D G3DSA:3.40.50.300 345 499 3.2E-21 T 14-10-2018 BD65_19 78a9e0c68a3b1b0b0fa128b384043ca8 684 Gene3D G3DSA:3.40.50.300 188 335 3.4E-29 T 14-10-2018 BD65_19 78a9e0c68a3b1b0b0fa128b384043ca8 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 163 1.7E-64 T 14-10-2018 IPR022161 DNA helicase IV, N-terminal domain BD65_19 78a9e0c68a3b1b0b0fa128b384043ca8 684 SUPERFAMILY SSF52540 195 676 1.28E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_19 78a9e0c68a3b1b0b0fa128b384043ca8 684 Gene3D G3DSA:3.40.50.300 500 676 1.6E-26 T 14-10-2018 BD65_19 78a9e0c68a3b1b0b0fa128b384043ca8 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 1.0E-41 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BD65_19 78a9e0c68a3b1b0b0fa128b384043ca8 684 Pfam PF13361 UvrD-like helicase C-terminal domain 512 659 3.0E-16 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 SMART SM00830 9 89 3.3E-30 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 Gene3D G3DSA:1.10.3660.10 248 373 1.5E-51 T 14-10-2018 BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 Gene3D G3DSA:1.20.59.10 1 80 3.9E-15 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 PIRSF PIRSF001499 1 373 9.5E-182 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 Pfam PF01817 Chorismate mutase type II 9 86 1.9E-19 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 Pfam PF02153 Prephenate dehydrogenase 141 344 1.7E-31 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 Gene3D G3DSA:3.40.50.720 81 246 2.3E-44 T 14-10-2018 BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 SUPERFAMILY SSF51735 91 238 1.1E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.0E-43 T 14-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 SUPERFAMILY SSF48179 241 366 1.36E-41 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_2732 b5cb47ed0b67f526f22bc896909c9d6a 373 SUPERFAMILY SSF48600 4 88 1.17E-22 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_451 2efedda24dc719f9b28e8646e532588f 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.1E-77 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.1E-77 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.1E-77 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.1E-77 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.1E-77 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.1E-77 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.1E-77 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 Gene3D G3DSA:3.20.20.60 4 332 5.6E-145 T 14-10-2018 BD65_451 2efedda24dc719f9b28e8646e532588f 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.8E-185 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 Gene3D G3DSA:3.40.1380.20 336 467 5.5E-45 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 3.3E-152 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 SUPERFAMILY SSF50800 70 167 2.44E-29 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BD65_451 2efedda24dc719f9b28e8646e532588f 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 7.2E-28 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 SUPERFAMILY SSF51621 1 338 5.58E-100 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BD65_451 2efedda24dc719f9b28e8646e532588f 470 SUPERFAMILY SSF52935 323 469 1.09E-34 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_451 2efedda24dc719f9b28e8646e532588f 470 Gene3D G3DSA:2.40.33.10 71 167 5.6E-145 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BD65_1388 e7a3dd73626aa624717df79cfc3d8454 386 SUPERFAMILY SSF52440 174 279 8.63E-42 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BD65_1388 e7a3dd73626aa624717df79cfc3d8454 386 Gene3D G3DSA:3.30.1490.330 263 343 1.4E-28 T 14-10-2018 BD65_1388 e7a3dd73626aa624717df79cfc3d8454 386 SUPERFAMILY SSF56059 1 383 1.88E-94 T 14-10-2018 BD65_1388 e7a3dd73626aa624717df79cfc3d8454 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.5E-163 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 Gene3D G3DSA:3.50.50.60 118 244 2.3E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 4.2E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.5E-125 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 Gene3D G3DSA:3.50.50.60 9 311 2.3E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.6E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.6E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 2.6E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.6E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.6E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.6E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.6E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 2.6E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.6E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 SUPERFAMILY SSF51905 2 314 1.8E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.6E-41 T 14-10-2018 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.6E-41 T 14-10-2018 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 4.6E-41 T 14-10-2018 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 4.6E-41 T 14-10-2018 BD65_3228 62f99baba0afce57387a6d61f3a81f95 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.6E-41 T 14-10-2018 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.3E-31 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 2.2E-256 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 Gene3D G3DSA:3.30.870.10 317 499 8.8E-74 T 14-10-2018 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 Gene3D G3DSA:1.20.58.310 9 109 4.5E-38 T 14-10-2018 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 Gene3D G3DSA:3.30.1840.10 110 307 2.1E-75 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 PIRSF PIRSF015589 1 687 1.7E-241 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.183 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 SUPERFAMILY SSF56024 500 682 1.44E-68 T 14-10-2018 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 Pfam PF02503 Polyphosphate kinase middle domain 119 320 5.4E-43 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 SUPERFAMILY SSF56024 315 497 4.08E-55 T 14-10-2018 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 9.8E-144 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 SUPERFAMILY SSF143724 107 313 5.89E-60 T 14-10-2018 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 SUPERFAMILY SSF140356 3 105 1.83E-34 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 BD65_1002 dda6921c049b1f6afe49bc854449d760 687 Gene3D G3DSA:3.30.870.10 500 686 5.2E-72 T 14-10-2018 BD65_1386 613e3c9a7c41addc1f2f34554d3f0b0f 488 Gene3D G3DSA:1.20.1600.10 23 446 4.9E-148 T 14-10-2018 BD65_1386 613e3c9a7c41addc1f2f34554d3f0b0f 488 SUPERFAMILY SSF56954 25 438 8.11E-93 T 14-10-2018 BD65_1386 613e3c9a7c41addc1f2f34554d3f0b0f 488 Pfam PF02321 Outer membrane efflux protein 25 209 1.4E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BD65_1386 613e3c9a7c41addc1f2f34554d3f0b0f 488 Pfam PF02321 Outer membrane efflux protein 232 423 2.3E-33 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BD65_1386 613e3c9a7c41addc1f2f34554d3f0b0f 488 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 438 3.1E-130 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 BD65_2691 6f8a061dfca94968e886bde436574f97 399 Gene3D G3DSA:3.30.420.370 151 216 2.9E-65 T 14-10-2018 BD65_2691 6f8a061dfca94968e886bde436574f97 399 SUPERFAMILY SSF53067 157 238 2.85E-17 T 14-10-2018 BD65_2691 6f8a061dfca94968e886bde436574f97 399 PIRSF PIRSF015761 12 394 3.8E-28 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 BD65_2691 6f8a061dfca94968e886bde436574f97 399 Gene3D G3DSA:3.30.420.380 16 238 2.9E-65 T 14-10-2018 BD65_2691 6f8a061dfca94968e886bde436574f97 399 Pfam PF05134 Type II secretion system (T2SS), protein L 16 240 2.3E-49 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain BD65_2691 6f8a061dfca94968e886bde436574f97 399 Pfam PF12693 GspL periplasmic domain 250 361 7.1E-8 T 14-10-2018 IPR025691 GspL periplasmic domain BD65_2691 6f8a061dfca94968e886bde436574f97 399 SUPERFAMILY SSF53067 14 153 3.63E-33 T 14-10-2018 BD65_2691 6f8a061dfca94968e886bde436574f97 399 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 16 359 5.0E-55 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 Gene3D G3DSA:2.40.40.20 704 828 7.2E-49 T 14-10-2018 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 4.0E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 SUPERFAMILY SSF53706 40 705 1.07E-203 T 14-10-2018 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 39 92 2.9E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.471 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 29 6.1E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 23 4.1E-6 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 Pfam PF00384 Molybdopterin oxidoreductase 96 568 6.8E-91 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 Gene3D G3DSA:3.40.50.740 96 623 0.0 T 14-10-2018 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 SMART SM00926 39 93 3.0E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 Gene3D G3DSA:3.30.200.210 39 666 0.0 T 14-10-2018 BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 SUPERFAMILY SSF50692 688 828 6.78E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BD65_970 8a3f77e3e5927d147c4a584edd8875e5 828 Gene3D G3DSA:3.40.228.10 175 703 0.0 T 14-10-2018 BD65_154 2435232026414095460d4ecc9b330a4c 376 Gene3D G3DSA:3.30.70.270 185 352 6.6E-49 T 14-10-2018 BD65_154 2435232026414095460d4ecc9b330a4c 376 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 351 2.0E-43 T 14-10-2018 IPR000160 GGDEF domain BD65_154 2435232026414095460d4ecc9b330a4c 376 SMART SM00267 177 351 2.2E-49 T 14-10-2018 IPR000160 GGDEF domain BD65_154 2435232026414095460d4ecc9b330a4c 376 Pfam PF00990 Diguanylate cyclase, GGDEF domain 194 347 8.0E-43 T 14-10-2018 IPR000160 GGDEF domain BD65_154 2435232026414095460d4ecc9b330a4c 376 SUPERFAMILY SSF55073 199 350 1.49E-41 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 SMART SM00984 320 424 5.5E-50 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 179 2.5E-62 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 PIRSF PIRSF500134 1 442 3.2E-185 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 PIRSF PIRSF000124 1 439 6.0E-145 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 4.8E-31 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 SUPERFAMILY SSF52413 309 435 3.53E-39 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 SUPERFAMILY SSF51735 1 195 4.59E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 Gene3D G3DSA:3.40.50.720 235 449 9.2E-78 T 14-10-2018 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 Gene3D G3DSA:3.40.50.720 1 202 4.6E-74 T 14-10-2018 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 3.1E-136 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 295 9.4E-39 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 Gene3D G3DSA:1.20.5.100 203 233 2.1E-18 T 14-10-2018 BD65_247 81624fc25d6752c8157acdc9ea3b7770 450 SUPERFAMILY SSF48179 204 297 1.43E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_2727 6c5ea3f8324fe4de6951058ab83f3e3c 118 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2727 6c5ea3f8324fe4de6951058ab83f3e3c 118 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2727 6c5ea3f8324fe4de6951058ab83f3e3c 118 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2727 6c5ea3f8324fe4de6951058ab83f3e3c 118 PIRSF PIRSF002191 1 118 5.6E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2727 6c5ea3f8324fe4de6951058ab83f3e3c 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 3.1E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2727 6c5ea3f8324fe4de6951058ab83f3e3c 118 Pfam PF01245 Ribosomal protein L19 3 113 1.3E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2727 6c5ea3f8324fe4de6951058ab83f3e3c 118 SUPERFAMILY SSF50104 2 116 1.4E-47 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BD65_2727 6c5ea3f8324fe4de6951058ab83f3e3c 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2727 6c5ea3f8324fe4de6951058ab83f3e3c 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.023 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2727 6c5ea3f8324fe4de6951058ab83f3e3c 118 Gene3D G3DSA:2.30.30.790 2 118 2.3E-16 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2819 296fa343b582188c6dc13baa9649bbfd 304 Gene3D G3DSA:1.10.1040.10 168 290 2.4E-45 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BD65_2819 296fa343b582188c6dc13baa9649bbfd 304 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 5.0E-80 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BD65_2819 296fa343b582188c6dc13baa9649bbfd 304 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 169 289 8.6E-34 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain BD65_2819 296fa343b582188c6dc13baa9649bbfd 304 SUPERFAMILY SSF48179 168 289 1.33E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_2819 296fa343b582188c6dc13baa9649bbfd 304 SUPERFAMILY SSF51735 1 167 4.2E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2819 296fa343b582188c6dc13baa9649bbfd 304 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 8.2E-26 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain BD65_2819 296fa343b582188c6dc13baa9649bbfd 304 Gene3D G3DSA:3.40.50.720 1 167 1.2E-56 T 14-10-2018 BD65_2726 e6d19356bf07a2aefc48bad3280d5b59 251 SUPERFAMILY SSF75217 1 245 6.34E-103 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BD65_2726 e6d19356bf07a2aefc48bad3280d5b59 251 Gene3D G3DSA:3.40.1280.10 1 160 6.1E-68 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BD65_2726 e6d19356bf07a2aefc48bad3280d5b59 251 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.1E-71 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BD65_2726 e6d19356bf07a2aefc48bad3280d5b59 251 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 5.5E-111 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BD65_2726 e6d19356bf07a2aefc48bad3280d5b59 251 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 251 120.147 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BD65_2726 e6d19356bf07a2aefc48bad3280d5b59 251 Gene3D G3DSA:1.10.1270.20 161 250 4.1E-36 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BD65_2726 e6d19356bf07a2aefc48bad3280d5b59 251 PIRSF PIRSF000386 1 250 1.1E-102 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BD65_2808 336e5a6572e0aaeb09172674c2e93cbd 330 SUPERFAMILY SSF55326 4 138 1.22E-34 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BD65_2808 336e5a6572e0aaeb09172674c2e93cbd 330 PIRSF PIRSF005303 1 322 2.6E-89 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BD65_2808 336e5a6572e0aaeb09172674c2e93cbd 330 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 254 9.0E-10 T 14-10-2018 IPR010918 PurM-like, C-terminal domain BD65_2808 336e5a6572e0aaeb09172674c2e93cbd 330 Gene3D G3DSA:3.30.1330.10 2 144 1.1E-44 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BD65_2808 336e5a6572e0aaeb09172674c2e93cbd 330 SUPERFAMILY SSF56042 143 309 2.24E-40 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BD65_2808 336e5a6572e0aaeb09172674c2e93cbd 330 Gene3D G3DSA:3.90.650.10 145 323 1.0E-57 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BD65_2808 336e5a6572e0aaeb09172674c2e93cbd 330 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 137 4.8E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain BD65_2808 336e5a6572e0aaeb09172674c2e93cbd 330 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 1.4E-114 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BD65_2808 336e5a6572e0aaeb09172674c2e93cbd 330 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 322 28.976 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BD65_2817 94cc8fadbf9b218264b381acc1141016 460 Gene3D G3DSA:1.20.1250.20 19 223 8.9E-44 T 14-10-2018 BD65_2817 94cc8fadbf9b218264b381acc1141016 460 Gene3D G3DSA:1.20.1250.20 245 439 4.9E-42 T 14-10-2018 BD65_2817 94cc8fadbf9b218264b381acc1141016 460 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 419 2.5E-136 T 14-10-2018 BD65_2817 94cc8fadbf9b218264b381acc1141016 460 ProSitePatterns PS00942 glpT family of transporters signature. 150 166 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 BD65_2817 94cc8fadbf9b218264b381acc1141016 460 Pfam PF07690 Major Facilitator Superfamily 34 402 9.6E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2817 94cc8fadbf9b218264b381acc1141016 460 PIRSF PIRSF002808 5 454 4.9E-106 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 BD65_2817 94cc8fadbf9b218264b381acc1141016 460 SUPERFAMILY SSF103473 5 440 5.62E-74 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_999 09fbec05b7bff01d1d9b09475b0a2a71 270 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_999 09fbec05b7bff01d1d9b09475b0a2a71 270 SMART SM00382 48 242 3.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_999 09fbec05b7bff01d1d9b09475b0a2a71 270 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 24 270 1.9E-117 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BD65_999 09fbec05b7bff01d1d9b09475b0a2a71 270 Pfam PF00005 ABC transporter 39 195 1.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_999 09fbec05b7bff01d1d9b09475b0a2a71 270 SUPERFAMILY SSF52540 22 258 1.11E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_999 09fbec05b7bff01d1d9b09475b0a2a71 270 Gene3D G3DSA:3.40.50.300 20 266 2.8E-63 T 14-10-2018 BD65_2903 7723b13a4e0426009a833311cba32ac9 174 PIRSF PIRSF001338 10 173 2.0E-65 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 BD65_2903 7723b13a4e0426009a833311cba32ac9 174 Gene3D G3DSA:3.40.50.7700 1 174 1.8E-76 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BD65_2903 7723b13a4e0426009a833311cba32ac9 174 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 15 168 31.778 T 14-10-2018 IPR033747 Class I PurE BD65_2903 7723b13a4e0426009a833311cba32ac9 174 Pfam PF00731 AIR carboxylase 14 162 4.7E-62 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BD65_2903 7723b13a4e0426009a833311cba32ac9 174 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 15 169 2.1E-64 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BD65_2903 7723b13a4e0426009a833311cba32ac9 174 SMART SM01001 13 164 2.4E-99 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BD65_2903 7723b13a4e0426009a833311cba32ac9 174 SUPERFAMILY SSF52255 14 172 3.79E-65 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BD65_1171 61083f11be3fdda676e44bd1f69440f5 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 2.0E-29 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 BD65_1171 61083f11be3fdda676e44bd1f69440f5 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 6.6E-37 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 BD65_1171 61083f11be3fdda676e44bd1f69440f5 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.296 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 BD65_11 92aa908d91dbaaf748ad12fa3ff8aae5 172 Pfam PF07977 FabA-like domain 29 158 1.9E-53 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BD65_11 92aa908d91dbaaf748ad12fa3ff8aae5 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 171 1.2E-93 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BD65_11 92aa908d91dbaaf748ad12fa3ff8aae5 172 SUPERFAMILY SSF54637 3 169 1.41E-56 T 14-10-2018 IPR029069 HotDog domain superfamily BD65_11 92aa908d91dbaaf748ad12fa3ff8aae5 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.34 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BD65_11 92aa908d91dbaaf748ad12fa3ff8aae5 172 Gene3D G3DSA:3.10.129.10 1 172 2.4E-64 T 14-10-2018 BD65_248 5aaf711a97d2f7e1398caec5794ee98f 135 SUPERFAMILY SSF81273 2 58 5.69E-18 T 14-10-2018 BD65_248 5aaf711a97d2f7e1398caec5794ee98f 135 Gene3D G3DSA:1.10.287.1050 1 83 1.4E-36 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 BD65_248 5aaf711a97d2f7e1398caec5794ee98f 135 PIRSF PIRSF002096 1 135 2.6E-56 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BD65_248 5aaf711a97d2f7e1398caec5794ee98f 135 Gene3D G3DSA:4.10.430.10 91 135 2.0E-24 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 BD65_248 5aaf711a97d2f7e1398caec5794ee98f 135 Pfam PF00816 H-NS histone family 32 127 5.8E-19 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BD65_248 5aaf711a97d2f7e1398caec5794ee98f 135 SUPERFAMILY SSF81273 93 135 1.65E-11 T 14-10-2018 BD65_248 5aaf711a97d2f7e1398caec5794ee98f 135 SMART SM00528 87 135 9.8E-23 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BD65_2793 09600a482a7f2a2265a432da738af8d8 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 2.4E-156 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BD65_2793 09600a482a7f2a2265a432da738af8d8 439 Pfam PF05525 Branched-chain amino acid transport protein 7 427 8.0E-154 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BD65_252 78bcef26c09cd92103cc95139206beae 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 464 2.8E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BD65_252 78bcef26c09cd92103cc95139206beae 544 Gene3D G3DSA:3.10.105.10 298 513 1.9E-195 T 14-10-2018 BD65_252 78bcef26c09cd92103cc95139206beae 544 Gene3D G3DSA:3.90.76.10 72 195 1.9E-195 T 14-10-2018 BD65_252 78bcef26c09cd92103cc95139206beae 544 PIRSF PIRSF002741 3 543 2.8E-111 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BD65_252 78bcef26c09cd92103cc95139206beae 544 SUPERFAMILY SSF53850 37 526 3.65E-142 T 14-10-2018 BD65_252 78bcef26c09cd92103cc95139206beae 544 Gene3D G3DSA:3.40.190.10 43 525 1.9E-195 T 14-10-2018 BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 SUPERFAMILY SSF53927 221 529 3.41E-128 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 Gene3D G3DSA:3.40.140.20 392 529 8.7E-57 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 Pfam PF02142 MGS-like domain 19 132 2.3E-29 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 Gene3D G3DSA:3.40.50.1380 1 200 7.5E-86 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 PIRSF PIRSF000414 1 529 2.2E-226 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 Gene3D G3DSA:3.40.140.20 218 374 1.5E-58 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.7E-260 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 2.4E-118 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 SMART SM00798 137 461 8.3E-216 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 SMART SM00851 19 132 4.0E-61 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 SUPERFAMILY SSF52335 7 197 2.75E-71 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BD65_1633 7184e5ceffffe19c2b0dd500da00f28c 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.503 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 Gene3D G3DSA:1.10.10.1330 116 250 2.8E-24 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BD65_1515 a30f4f78993379eb71e93064d66f255f 477 Gene3D G3DSA:1.10.10.60 417 474 1.9E-22 T 14-10-2018 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 3.3E-60 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 3.4E-15 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 PIRSF PIRSF000774 1 477 7.4E-149 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 PRINTS PR00045 Sigma-54 factor signature 186 203 7.3E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 PRINTS PR00045 Sigma-54 factor signature 376 388 7.3E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 PRINTS PR00045 Sigma-54 factor signature 450 468 7.3E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 PRINTS PR00045 Sigma-54 factor signature 392 403 7.3E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 474 1.6E-156 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BD65_1515 a30f4f78993379eb71e93064d66f255f 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 8.8E-70 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding BD65_119 b1ce2b94e5ebcd95588f6613a2617d48 477 PIRSF PIRSF006446 2 462 5.0E-228 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BD65_119 b1ce2b94e5ebcd95588f6613a2617d48 477 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 3.5E-169 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BD65_781 6b1b33ded418e374b058e4dfa89aa9ea 327 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 243 321 3.5E-6 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BD65_781 6b1b33ded418e374b058e4dfa89aa9ea 327 SMART SM00833 241 324 0.0081 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BD65_781 6b1b33ded418e374b058e4dfa89aa9ea 327 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 164 1.0E-40 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BD65_781 6b1b33ded418e374b058e4dfa89aa9ea 327 Gene3D G3DSA:3.40.50.300 2 195 2.2E-45 T 14-10-2018 BD65_781 6b1b33ded418e374b058e4dfa89aa9ea 327 SUPERFAMILY SSF52540 6 185 2.23E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1461 924cc0fce2624e781c3c3753d77eb223 329 SUPERFAMILY SSF51735 2 152 3.31E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1461 924cc0fce2624e781c3c3753d77eb223 329 Gene3D G3DSA:3.40.50.720 1 134 1.6E-35 T 14-10-2018 BD65_1461 924cc0fce2624e781c3c3753d77eb223 329 Gene3D G3DSA:3.30.360.10 135 325 1.1E-53 T 14-10-2018 BD65_1461 924cc0fce2624e781c3c3753d77eb223 329 SUPERFAMILY SSF55347 127 292 2.45E-23 T 14-10-2018 BD65_1461 924cc0fce2624e781c3c3753d77eb223 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.1E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BD65_3198 3cc2927a6f633ac33363d3e099f6c552 377 Pfam PF00005 ABC transporter 36 177 5.6E-39 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3198 3cc2927a6f633ac33363d3e099f6c552 377 Pfam PF08402 TOBE domain 295 375 1.2E-18 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BD65_3198 3cc2927a6f633ac33363d3e099f6c552 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_3198 3cc2927a6f633ac33363d3e099f6c552 377 SMART SM00382 44 227 3.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3198 3cc2927a6f633ac33363d3e099f6c552 377 SUPERFAMILY SSF52540 19 257 4.5E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3198 3cc2927a6f633ac33363d3e099f6c552 377 SUPERFAMILY SSF50331 252 375 7.37E-16 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BD65_3198 3cc2927a6f633ac33363d3e099f6c552 377 Gene3D G3DSA:2.40.50.140 302 356 2.0E-11 T 14-10-2018 BD65_3198 3cc2927a6f633ac33363d3e099f6c552 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.9E-147 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 BD65_3198 3cc2927a6f633ac33363d3e099f6c552 377 Gene3D G3DSA:3.40.50.300 19 238 8.8E-71 T 14-10-2018 BD65_3198 3cc2927a6f633ac33363d3e099f6c552 377 Gene3D G3DSA:2.40.50.940 239 301 2.0E-11 T 14-10-2018 BD65_1378 53175bd582b86cf782c502579d1600ec 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 633 3.1E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BD65_1378 53175bd582b86cf782c502579d1600ec 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 696 8.0E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BD65_1378 53175bd582b86cf782c502579d1600ec 757 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 743 34.057 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_1378 53175bd582b86cf782c502579d1600ec 757 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 743 0.0 T 14-10-2018 BD65_1378 53175bd582b86cf782c502579d1600ec 757 Gene3D G3DSA:3.90.199.10 31 162 8.5E-59 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BD65_1378 53175bd582b86cf782c502579d1600ec 757 Gene3D G3DSA:3.30.1360.40 163 344 6.6E-72 T 14-10-2018 BD65_1378 53175bd582b86cf782c502579d1600ec 757 SMART SM00434 12 462 1.2E-236 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_1378 53175bd582b86cf782c502579d1600ec 757 Gene3D G3DSA:1.10.268.10 345 484 1.2E-45 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BD65_1378 53175bd582b86cf782c502579d1600ec 757 Gene3D G3DSA:2.120.10.90 501 729 6.5E-11 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BD65_1378 53175bd582b86cf782c502579d1600ec 757 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 2.0E-134 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_1378 53175bd582b86cf782c502579d1600ec 757 SUPERFAMILY SSF56719 32 483 7.72E-155 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BD65_1378 53175bd582b86cf782c502579d1600ec 757 SUPERFAMILY SSF101904 498 745 6.67E-52 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BD65_750 7f8e837d4a79e12ab62de11bdd5865ac 356 Gene3D G3DSA:2.40.50.940 233 347 6.2E-11 T 14-10-2018 BD65_750 7f8e837d4a79e12ab62de11bdd5865ac 356 SUPERFAMILY SSF52540 15 254 1.98E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_750 7f8e837d4a79e12ab62de11bdd5865ac 356 SUPERFAMILY SSF50331 248 353 1.63E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BD65_750 7f8e837d4a79e12ab62de11bdd5865ac 356 Gene3D G3DSA:2.40.50.140 289 345 6.2E-11 T 14-10-2018 BD65_750 7f8e837d4a79e12ab62de11bdd5865ac 356 Pfam PF08402 TOBE domain 282 353 2.0E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BD65_750 7f8e837d4a79e12ab62de11bdd5865ac 356 Pfam PF00005 ABC transporter 31 172 3.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_750 7f8e837d4a79e12ab62de11bdd5865ac 356 Gene3D G3DSA:3.40.50.300 14 232 6.7E-69 T 14-10-2018 BD65_750 7f8e837d4a79e12ab62de11bdd5865ac 356 SMART SM00382 39 222 2.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_750 7f8e837d4a79e12ab62de11bdd5865ac 356 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2133 997ea9010b74559f356d3b69584fe26e 80 Gene3D G3DSA:1.10.10.10 1 79 1.1E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2133 997ea9010b74559f356d3b69584fe26e 80 Pfam PF09012 FeoC like transcriptional regulator 3 76 1.6E-19 T 14-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC BD65_2133 997ea9010b74559f356d3b69584fe26e 80 SUPERFAMILY SSF46785 1 74 1.1E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2133 997ea9010b74559f356d3b69584fe26e 80 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 78 26.345 T 14-10-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor BD65_666 1b248121d20570ac4e911746df8a5f7e 425 Gene3D G3DSA:1.20.1330.10 44 175 2.5E-72 T 14-10-2018 BD65_666 1b248121d20570ac4e911746df8a5f7e 425 Gene3D G3DSA:1.10.8.410 373 425 3.9E-23 T 14-10-2018 BD65_666 1b248121d20570ac4e911746df8a5f7e 425 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 4.8E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BD65_666 1b248121d20570ac4e911746df8a5f7e 425 Gene3D G3DSA:2.170.280.10 176 315 2.5E-72 T 14-10-2018 BD65_666 1b248121d20570ac4e911746df8a5f7e 425 PRINTS PR00207 Flagellin signature 36 53 7.0E-30 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BD65_666 1b248121d20570ac4e911746df8a5f7e 425 PRINTS PR00207 Flagellin signature 75 94 7.0E-30 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BD65_666 1b248121d20570ac4e911746df8a5f7e 425 PRINTS PR00207 Flagellin signature 110 133 7.0E-30 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BD65_666 1b248121d20570ac4e911746df8a5f7e 425 SUPERFAMILY SSF64518 1 425 1.57E-96 T 14-10-2018 BD65_666 1b248121d20570ac4e911746df8a5f7e 425 Gene3D G3DSA:1.20.58.1830 4 32 2.5E-72 T 14-10-2018 BD65_666 1b248121d20570ac4e911746df8a5f7e 425 Gene3D G3DSA:2.30.220.10 190 288 2.5E-72 T 14-10-2018 BD65_666 1b248121d20570ac4e911746df8a5f7e 425 Pfam PF00700 Bacterial flagellin C-terminal helical region 340 424 2.6E-30 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BD65_2135 200728b49a9baa6f895ec65b6ab88820 74 Pfam PF04023 FeoA domain 8 63 2.7E-7 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 BD65_2135 200728b49a9baa6f895ec65b6ab88820 74 SUPERFAMILY SSF50037 6 70 5.8E-15 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal BD65_2135 200728b49a9baa6f895ec65b6ab88820 74 SMART SM00899 1 72 8.0E-8 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 BD65_2135 200728b49a9baa6f895ec65b6ab88820 74 Gene3D G3DSA:2.30.30.90 1 73 1.0E-28 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain BD65_3219 e193e3db5d46d94da97ff5823d6e46f0 371 Gene3D G3DSA:2.40.50.100 61 223 5.7E-85 T 14-10-2018 BD65_3219 e193e3db5d46d94da97ff5823d6e46f0 371 SUPERFAMILY SSF111369 53 299 6.67E-29 T 14-10-2018 BD65_3219 e193e3db5d46d94da97ff5823d6e46f0 371 Gene3D G3DSA:1.10.287.470 95 186 5.7E-85 T 14-10-2018 BD65_3219 e193e3db5d46d94da97ff5823d6e46f0 371 Gene3D G3DSA:2.40.30.170 50 302 5.7E-85 T 14-10-2018 BD65_3219 e193e3db5d46d94da97ff5823d6e46f0 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 295 5.3E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BD65_3219 e193e3db5d46d94da97ff5823d6e46f0 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 364 6.7E-55 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BD65_3219 e193e3db5d46d94da97ff5823d6e46f0 371 Gene3D G3DSA:2.40.420.20 46 362 5.7E-85 T 14-10-2018 BD65_2185 759192ff57cbc6fb7bd0bb4d68559668 78 PIRSF PIRSF006169 1 76 3.9E-36 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 BD65_2185 759192ff57cbc6fb7bd0bb4d68559668 78 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 4.0E-25 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 BD65_2185 759192ff57cbc6fb7bd0bb4d68559668 78 Gene3D G3DSA:1.10.10.610 1 75 5.2E-29 T 14-10-2018 IPR036685 YehU-like superfamily BD65_2185 759192ff57cbc6fb7bd0bb4d68559668 78 SUPERFAMILY SSF118001 1 72 5.36E-28 T 14-10-2018 IPR036685 YehU-like superfamily BD65_2185 759192ff57cbc6fb7bd0bb4d68559668 78 Pfam PF06794 Uncharacterised protein family (UPF0270) 2 69 5.2E-33 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 BD65_2185 759192ff57cbc6fb7bd0bb4d68559668 78 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.212 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 SUPERFAMILY SSF53613 12 310 1.71E-56 T 14-10-2018 IPR029056 Ribokinase-like BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 Gene3D G3DSA:3.40.50.620 317 475 7.2E-39 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 Gene3D G3DSA:3.40.1190.20 2 309 5.6E-110 T 14-10-2018 IPR029056 Ribokinase-like BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.221 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 Pfam PF00294 pfkB family carbohydrate kinase 11 305 5.3E-53 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 SUPERFAMILY SSF52374 340 470 2.67E-21 T 14-10-2018 BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.9E-127 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 6.3E-63 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 1.4E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 Pfam PF01467 Cytidylyltransferase-like 345 469 9.2E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BD65_1392 4414b2247ce7dcbd8eca877ea98eeef6 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BD65_175 bc593c4498c40271b140209fdfd62b98 270 Pfam PF13649 Methyltransferase domain 83 181 7.1E-14 T 14-10-2018 BD65_175 bc593c4498c40271b140209fdfd62b98 270 Gene3D G3DSA:3.40.50.150 41 270 7.5E-66 T 14-10-2018 BD65_175 bc593c4498c40271b140209fdfd62b98 270 PIRSF PIRSF006325 24 266 3.8E-130 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BD65_175 bc593c4498c40271b140209fdfd62b98 270 SUPERFAMILY SSF53335 43 265 1.16E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_175 bc593c4498c40271b140209fdfd62b98 270 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 26 265 42.442 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BD65_175 bc593c4498c40271b140209fdfd62b98 270 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 27 265 1.1E-125 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BD65_2309 7fedd1109436fa6b3a55cfd8aad8feea 217 Pfam PF06551 Protein of unknown function (DUF1120) 34 129 7.8E-10 T 14-10-2018 IPR010546 Protein of unknown function DUF1120 BD65_3118 d3eb3a87fe032b7b01ed3f03e81eb1fb 735 Gene3D G3DSA:3.40.50.300 505 690 3.3E-20 T 14-10-2018 BD65_3118 d3eb3a87fe032b7b01ed3f03e81eb1fb 735 Pfam PF13307 Helicase C-terminal domain 535 688 4.4E-24 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BD65_3118 d3eb3a87fe032b7b01ed3f03e81eb1fb 735 SMART SM00487 23 307 3.8E-4 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_3118 d3eb3a87fe032b7b01ed3f03e81eb1fb 735 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 34 696 34.345 T 14-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 BD65_3118 d3eb3a87fe032b7b01ed3f03e81eb1fb 735 Gene3D G3DSA:3.40.50.300 26 289 1.5E-39 T 14-10-2018 BD65_3118 d3eb3a87fe032b7b01ed3f03e81eb1fb 735 SUPERFAMILY SSF52540 47 670 7.98E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3118 d3eb3a87fe032b7b01ed3f03e81eb1fb 735 SMART SM00491 545 677 5.9E-33 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BD65_3118 d3eb3a87fe032b7b01ed3f03e81eb1fb 735 Pfam PF06733 DEAD_2 198 263 1.4E-7 T 14-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 SUPERFAMILY SSF82693 659 834 3.82E-7 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 Gene3D G3DSA:1.20.1640.10 10 502 4.3E-292 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 Gene3D G3DSA:3.30.70.1430 40 797 4.3E-292 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 SUPERFAMILY SSF82866 290 490 9.81E-46 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 Gene3D G3DSA:3.30.2090.10 701 789 4.3E-292 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 SUPERFAMILY SSF82693 40 135 3.92E-23 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 6.2E-85 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.2E-85 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.2E-85 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.2E-85 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 6.2E-85 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.2E-85 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.2E-85 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.2E-85 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.2E-85 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 SUPERFAMILY SSF82693 136 324 1.52E-21 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 SUPERFAMILY SSF82714 183 265 1.29E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 SUPERFAMILY SSF82866 811 1010 5.23E-42 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 SUPERFAMILY SSF82693 555 650 1.31E-15 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 Gene3D G3DSA:3.30.2090.10 179 269 4.3E-292 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 Gene3D G3DSA:3.30.70.1440 650 847 4.3E-292 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 SUPERFAMILY SSF82714 706 785 3.14E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.198 T 14-10-2018 IPR023931 Multidrug resistance protein MdtC BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 Gene3D G3DSA:1.20.1640.10 503 1005 4.3E-292 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 Gene3D G3DSA:3.30.70.1430 557 649 4.3E-292 T 14-10-2018 BD65_1013 b42b787d8a3a5aef2cbd560650f3f3fe 1024 Gene3D G3DSA:3.30.70.1320 135 326 4.3E-292 T 14-10-2018 BD65_495 c6df74213639dc196672a8cf86c775c9 116 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 24 113 3.2E-36 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 BD65_495 c6df74213639dc196672a8cf86c775c9 116 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 115 2.4E-46 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BD65_495 c6df74213639dc196672a8cf86c775c9 116 SUPERFAMILY SSF55200 23 115 6.93E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BD65_495 c6df74213639dc196672a8cf86c775c9 116 Gene3D G3DSA:3.30.110.10 14 116 9.9E-38 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.5E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 SUPERFAMILY SSF48150 2 207 4.55E-72 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 SMART SM00478 38 185 6.0E-54 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 TIGRFAM TIGR01083 nth: endonuclease III 3 194 4.0E-89 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 PIRSF PIRSF001435 1 210 9.3E-52 T 14-10-2018 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.921 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 7.7E-20 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 Gene3D G3DSA:1.10.1670.10 11 203 2.2E-77 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 Gene3D G3DSA:1.10.340.30 21 132 2.2E-77 T 14-10-2018 BD65_311 9d50cf9fbfc48853cd560cd18b48f05f 213 SMART SM00525 186 206 4.4E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BD65_1456 c15cee5c316ded60cbb08c4f2c314797 563 Pfam PF17287 POTRA domain 155 209 2.5E-21 T 14-10-2018 IPR035251 ShlB, POTRA domain BD65_1456 c15cee5c316ded60cbb08c4f2c314797 563 Gene3D G3DSA:2.40.160.50 187 563 1.6E-102 T 14-10-2018 BD65_1456 c15cee5c316ded60cbb08c4f2c314797 563 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 214 527 1.5E-110 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal BD65_1456 c15cee5c316ded60cbb08c4f2c314797 563 Gene3D G3DSA:3.10.20.310 79 157 2.1E-7 T 14-10-2018 BD65_1456 c15cee5c316ded60cbb08c4f2c314797 563 PIRSF PIRSF029745 4 563 4.6E-161 T 14-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 BD65_1456 c15cee5c316ded60cbb08c4f2c314797 563 Pfam PF08479 POTRA domain, ShlB-type 78 154 1.2E-24 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type BD65_180 1377f2d6e40b0816a952818a7e2bd5c7 247 Gene3D G3DSA:1.10.10.200 1 81 1.8E-34 T 14-10-2018 IPR017856 Integrase-like, N-terminal BD65_180 1377f2d6e40b0816a952818a7e2bd5c7 247 Gene3D G3DSA:3.30.70.980 85 236 8.0E-59 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_180 1377f2d6e40b0816a952818a7e2bd5c7 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.008 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_180 1377f2d6e40b0816a952818a7e2bd5c7 247 Gene3D G3DSA:3.30.70.980 130 205 8.0E-59 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_180 1377f2d6e40b0816a952818a7e2bd5c7 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.8E-104 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_180 1377f2d6e40b0816a952818a7e2bd5c7 247 SUPERFAMILY SSF75625 3 245 1.44E-95 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_180 1377f2d6e40b0816a952818a7e2bd5c7 247 Pfam PF01709 Transcriptional regulator 5 236 1.1E-92 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2132 3df84d6b8e6a6f8d5766f6dbd93e7154 89 Gene3D G3DSA:3.30.1660.10 26 89 1.6E-21 T 14-10-2018 IPR025543 Dodecin-like BD65_2132 3df84d6b8e6a6f8d5766f6dbd93e7154 89 SUPERFAMILY SSF159871 3 89 2.22E-22 T 14-10-2018 IPR036275 YdgH-like superfamily BD65_2132 3df84d6b8e6a6f8d5766f6dbd93e7154 89 Pfam PF07338 Protein of unknown function (DUF1471) 39 89 5.2E-19 T 14-10-2018 IPR010854 Domain of unknown function DUF1471 BD65_469 342edec892ede70780e4cab0a566bfe4 272 SUPERFAMILY SSF53807 19 265 7.06E-47 T 14-10-2018 BD65_469 342edec892ede70780e4cab0a566bfe4 272 Gene3D G3DSA:3.40.50.1980 140 272 3.2E-47 T 14-10-2018 BD65_469 342edec892ede70780e4cab0a566bfe4 272 Pfam PF01497 Periplasmic binding protein 22 247 2.5E-25 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain BD65_469 342edec892ede70780e4cab0a566bfe4 272 Gene3D G3DSA:3.40.50.1980 18 139 6.4E-39 T 14-10-2018 BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 317 353 0.57 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1185 1215 0.074 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 388 1.3E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 792 818 0.11 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 514 544 0.074 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 666 698 3.5E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1024 1059 0.017 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 922 962 7.3E-8 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 844 879 0.69 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 962 1004 0.66 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.5E-7 T 14-10-2018 IPR024973 ESPR domain BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 SMART SM00912 88 208 8.6E-47 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 Pfam PF05860 haemagglutination activity domain 75 207 3.1E-33 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 Pfam PF05594 Haemagluttinin repeat 781 826 13.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 Pfam PF05594 Haemagluttinin repeat 350 422 0.038 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 Pfam PF05594 Haemagluttinin repeat 842 904 3.8 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 Pfam PF05594 Haemagluttinin repeat 505 569 0.013 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 Pfam PF05594 Haemagluttinin repeat 910 1004 0.16 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 Pfam PF05594 Haemagluttinin repeat 1181 1240 3.8E-5 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 203 1.1E-22 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 SUPERFAMILY SSF51126 77 345 6.28E-67 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor BD65_1455 aa4e8de5849d59b0eb6b45a74773e762 1316 Gene3D G3DSA:2.160.20.10 75 347 9.8E-104 T 14-10-2018 IPR012334 Pectin lyase fold BD65_792 15eaf81205d99597f58ab52f4d464962 585 Gene3D G3DSA:3.40.50.300 186 378 2.0E-32 T 14-10-2018 BD65_792 15eaf81205d99597f58ab52f4d464962 585 Pfam PF00271 Helicase conserved C-terminal domain 241 343 6.5E-12 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_792 15eaf81205d99597f58ab52f4d464962 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 1.7E-25 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BD65_792 15eaf81205d99597f58ab52f4d464962 585 SMART SM00490 266 345 1.6E-8 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_792 15eaf81205d99597f58ab52f4d464962 585 SUPERFAMILY SSF52540 50 358 7.09E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_792 15eaf81205d99597f58ab52f4d464962 585 SUPERFAMILY SSF57829 422 466 2.38E-7 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BD65_792 15eaf81205d99597f58ab52f4d464962 585 Gene3D G3DSA:3.40.50.300 1 169 2.9E-29 T 14-10-2018 BD65_792 15eaf81205d99597f58ab52f4d464962 585 SMART SM00487 1 185 6.9E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_2771 dc0d1bbac7915996c5891c924ba1d963 133 Pfam PF07417 Transcriptional regulator Crl 5 122 1.5E-54 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 BD65_2771 dc0d1bbac7915996c5891c924ba1d963 133 Gene3D G3DSA:3.30.310.230 1 133 9.8E-58 T 14-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 BD65_2771 dc0d1bbac7915996c5891c924ba1d963 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 3 128 32.614 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 BD65_2887 05ed4791bba36a9fa8e18ff83fca0c75 343 SUPERFAMILY SSF51735 1 259 5.9E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2887 05ed4791bba36a9fa8e18ff83fca0c75 343 Pfam PF02719 Polysaccharide biosynthesis protein 7 281 1.3E-102 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BD65_2887 05ed4791bba36a9fa8e18ff83fca0c75 343 Gene3D G3DSA:3.40.50.720 4 308 7.6E-132 T 14-10-2018 BD65_2887 05ed4791bba36a9fa8e18ff83fca0c75 343 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 284 330 1.6E-19 T 14-10-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 BD65_2887 05ed4791bba36a9fa8e18ff83fca0c75 343 Gene3D G3DSA:3.90.25.30 165 320 7.6E-132 T 14-10-2018 BD65_2550 84204ab16d3aa7387cfcaa350e3561cd 587 Gene3D G3DSA:3.40.710.10 295 475 2.2E-111 T 14-10-2018 BD65_2550 84204ab16d3aa7387cfcaa350e3561cd 587 Gene3D G3DSA:3.30.450.330 236 549 2.2E-111 T 14-10-2018 BD65_2550 84204ab16d3aa7387cfcaa350e3561cd 587 SUPERFAMILY SSF56519 62 233 1.83E-44 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BD65_2550 84204ab16d3aa7387cfcaa350e3561cd 587 Gene3D G3DSA:3.90.1310.30 58 234 9.1E-44 T 14-10-2018 BD65_2550 84204ab16d3aa7387cfcaa350e3561cd 587 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 553 3.5E-83 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BD65_2550 84204ab16d3aa7387cfcaa350e3561cd 587 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 18 569 46.111 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2550 84204ab16d3aa7387cfcaa350e3561cd 587 SUPERFAMILY SSF56601 234 562 4.14E-86 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_2550 84204ab16d3aa7387cfcaa350e3561cd 587 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 219 1.2E-17 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BD65_1896 cd366eef5b9315101a42ee6e23870323 90 Gene3D G3DSA:1.10.1660.70 5 90 1.3E-35 T 14-10-2018 IPR038147 Cox superfamily BD65_1896 cd366eef5b9315101a42ee6e23870323 90 Pfam PF10743 Regulatory phage protein cox 11 90 6.5E-31 T 14-10-2018 IPR019679 Regulatory phage protein Cox BD65_2600 2947a1badd9c6dae2b34515e932ce4f2 440 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 2 431 38.332 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 BD65_2600 2947a1badd9c6dae2b34515e932ce4f2 440 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 3 432 7.6E-161 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 BD65_2600 2947a1badd9c6dae2b34515e932ce4f2 440 Pfam PF12626 Polymerase A arginine-rich C-terminus 313 432 1.6E-42 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain BD65_2600 2947a1badd9c6dae2b34515e932ce4f2 440 SUPERFAMILY SSF81301 5 164 9.37E-41 T 14-10-2018 BD65_2600 2947a1badd9c6dae2b34515e932ce4f2 440 Pfam PF01743 Poly A polymerase head domain 34 168 1.2E-39 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BD65_2600 2947a1badd9c6dae2b34515e932ce4f2 440 Gene3D G3DSA:1.10.3090.10 166 417 2.1E-102 T 14-10-2018 BD65_2600 2947a1badd9c6dae2b34515e932ce4f2 440 Gene3D G3DSA:3.30.460.10 1 165 2.6E-66 T 14-10-2018 BD65_2600 2947a1badd9c6dae2b34515e932ce4f2 440 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 195 255 5.2E-20 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BD65_2600 2947a1badd9c6dae2b34515e932ce4f2 440 SUPERFAMILY SSF81891 166 377 3.14E-50 T 14-10-2018 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.4E-70 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 Gene3D G3DSA:2.40.50.140 1 124 2.1E-63 T 14-10-2018 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 PIRSF PIRSF002133 1 124 3.6E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.451 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 SUPERFAMILY SSF50249 3 123 4.45E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2201 a661ab707e73da46801d1cf7dacbabce 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 5.6E-43 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_202 b57e73dea97e6a7c2f3b8b21224ce6df 89 Gene3D G3DSA:3.30.1070.10 31 87 5.9E-28 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 BD65_202 b57e73dea97e6a7c2f3b8b21224ce6df 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 2.9E-24 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BD65_202 b57e73dea97e6a7c2f3b8b21224ce6df 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.0E-33 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BD65_202 b57e73dea97e6a7c2f3b8b21224ce6df 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 18.604 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BD65_202 b57e73dea97e6a7c2f3b8b21224ce6df 89 SUPERFAMILY SSF55229 32 85 1.44E-17 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 Pfam PF03173 Putative carbohydrate binding domain 37 196 6.5E-67 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 216 334 1.6E-16 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BD65_3001 01fa90a9a2c05d952f03f74313368939 893 SUPERFAMILY SSF81296 786 888 6.3E-39 T 14-10-2018 IPR014756 Immunoglobulin E-set BD65_3001 01fa90a9a2c05d952f03f74313368939 893 SUPERFAMILY SSF51445 338 778 3.5E-137 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_3001 01fa90a9a2c05d952f03f74313368939 893 Gene3D G3DSA:2.60.40.10 824 889 3.3E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_3001 01fa90a9a2c05d952f03f74313368939 893 SMART SM01081 36 197 2.5E-92 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 338 769 9.0E-109 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 PRINTS PR00738 Glycosyl hydrolase family 20 signature 361 382 1.5E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 PRINTS PR00738 Glycosyl hydrolase family 20 signature 505 523 1.5E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 PRINTS PR00738 Glycosyl hydrolase family 20 signature 532 545 1.5E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 PRINTS PR00738 Glycosyl hydrolase family 20 signature 733 749 1.5E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 PRINTS PR00738 Glycosyl hydrolase family 20 signature 298 318 1.5E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 PRINTS PR00738 Glycosyl hydrolase family 20 signature 332 349 1.5E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 PRINTS PR00738 Glycosyl hydrolase family 20 signature 438 455 1.5E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 PRINTS PR00738 Glycosyl hydrolase family 20 signature 751 768 1.5E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 Gene3D G3DSA:3.20.20.80 336 823 6.2E-164 T 14-10-2018 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 Gene3D G3DSA:3.30.379.10 209 335 4.3E-26 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 810 885 5.2E-32 T 14-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 SUPERFAMILY SSF49384 29 199 2.93E-65 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 SUPERFAMILY SSF55545 207 337 2.62E-28 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BD65_3001 01fa90a9a2c05d952f03f74313368939 893 Gene3D G3DSA:2.60.40.290 28 169 1.3E-60 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 5.6E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 5.6E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 5.6E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 5.6E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 8.0E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 8.0E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 8.0E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 8.0E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 8.0E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 Gene3D G3DSA:3.20.20.10 33 279 5.5E-143 T 14-10-2018 IPR029066 PLP-binding barrel BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 38.208 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 Gene3D G3DSA:2.40.37.10 22 416 5.5E-143 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 48 275 9.0E-58 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 276 376 6.8E-24 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 SUPERFAMILY SSF51419 25 277 1.57E-55 T 14-10-2018 IPR029066 PLP-binding barrel BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 SUPERFAMILY SSF50621 251 419 1.05E-56 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BD65_1236 8800acc2d0afc5ef4af1866f15049eda 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 418 4.7E-130 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_2158 abeb2bca0b888ce1f675aff98b835582 363 PIRSF PIRSF001455 9 358 5.5E-106 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BD65_2158 abeb2bca0b888ce1f675aff98b835582 363 Gene3D G3DSA:3.40.50.1970 1 172 2.0E-64 T 14-10-2018 BD65_2158 abeb2bca0b888ce1f675aff98b835582 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 351 6.2E-120 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BD65_2158 abeb2bca0b888ce1f675aff98b835582 363 Gene3D G3DSA:1.20.1090.10 173 361 1.4E-63 T 14-10-2018 BD65_2158 abeb2bca0b888ce1f675aff98b835582 363 Pfam PF01761 3-dehydroquinate synthase 67 326 8.9E-108 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BD65_2158 abeb2bca0b888ce1f675aff98b835582 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 361 73.258 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BD65_2158 abeb2bca0b888ce1f675aff98b835582 363 SUPERFAMILY SSF56796 4 357 6.93E-117 T 14-10-2018 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 Gene3D G3DSA:3.40.50.300 6 595 1.2E-245 T 14-10-2018 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 Gene3D G3DSA:3.30.190.20 130 239 1.2E-245 T 14-10-2018 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.983 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 Gene3D G3DSA:1.10.8.280 287 403 1.2E-245 T 14-10-2018 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 Pfam PF00005 ABC transporter 623 860 5.3E-9 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 SUPERFAMILY SSF52540 619 911 3.36E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 Gene3D G3DSA:3.40.50.300 614 936 1.7E-138 T 14-10-2018 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 SUPERFAMILY SSF52540 1 569 1.31E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 Gene3D G3DSA:1.20.1580.10 693 830 1.7E-138 T 14-10-2018 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1572 86747ec364ba00fa95b13bda20f5c952 944 Gene3D G3DSA:1.20.1580.10 90 492 1.2E-245 T 14-10-2018 BD65_98 f0e64eac47bd211840007c2caa0cb2bb 239 SMART SM00448 2 117 2.3E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_98 f0e64eac47bd211840007c2caa0cb2bb 239 PIRSF PIRSF006171 1 230 1.3E-76 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 BD65_98 f0e64eac47bd211840007c2caa0cb2bb 239 Gene3D G3DSA:3.40.50.2300 1 141 2.1E-26 T 14-10-2018 BD65_98 f0e64eac47bd211840007c2caa0cb2bb 239 SUPERFAMILY SSF52172 1 138 4.98E-30 T 14-10-2018 IPR011006 CheY-like superfamily BD65_98 f0e64eac47bd211840007c2caa0cb2bb 239 Pfam PF00072 Response regulator receiver domain 4 117 7.3E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2181 39c46bf604c5dffbb7f11158f8a4206c 309 Pfam PF00892 EamA-like transporter family 6 120 3.2E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_2181 39c46bf604c5dffbb7f11158f8a4206c 309 Pfam PF00892 EamA-like transporter family 168 300 1.5E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_2379 30a38b21e8806f45e7bf7e67056057c0 263 Pfam PF00005 ABC transporter 28 184 7.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2379 30a38b21e8806f45e7bf7e67056057c0 263 PIRSF PIRSF037116 2 263 8.2E-141 T 14-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK BD65_2379 30a38b21e8806f45e7bf7e67056057c0 263 Gene3D G3DSA:3.40.50.300 9 263 1.4E-65 T 14-10-2018 BD65_2379 30a38b21e8806f45e7bf7e67056057c0 263 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 10 261 9.0E-119 T 14-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK BD65_2379 30a38b21e8806f45e7bf7e67056057c0 263 SMART SM00382 36 234 2.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2379 30a38b21e8806f45e7bf7e67056057c0 263 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2379 30a38b21e8806f45e7bf7e67056057c0 263 SUPERFAMILY SSF52540 6 259 4.93E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 SMART SM00662 23 234 1.4E-105 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 5.8E-113 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 SUPERFAMILY SSF55257 6 231 1.57E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 14-10-2018 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.627 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 SUPERFAMILY SSF56553 53 178 2.09E-41 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 Gene3D G3DSA:2.170.120.12 53 177 4.1E-86 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 Gene3D G3DSA:1.10.150.20 244 329 9.7E-39 T 14-10-2018 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 Gene3D G3DSA:3.30.1360.10 17 228 4.1E-86 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2233 168dd33bfe0eb11c2695cc766dc93037 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.7E-23 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_2719 7424946f0955f753c716be1f037cddc7 519 SUPERFAMILY SSF55931 4 514 6.54E-204 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BD65_2719 7424946f0955f753c716be1f037cddc7 519 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 519 227.799 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BD65_2719 7424946f0955f753c716be1f037cddc7 519 Pfam PF04262 Glutamate-cysteine ligase 10 380 3.3E-173 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BD65_2719 7424946f0955f753c716be1f037cddc7 519 Gene3D G3DSA:3.30.590.20 17 518 2.5E-189 T 14-10-2018 BD65_2719 7424946f0955f753c716be1f037cddc7 519 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 515 3.6E-254 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BD65_695 4642b313556fa7d85c2c762de4abfe21 251 Pfam PF00460 Flagella basal body rod protein 5 35 6.4E-10 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BD65_695 4642b313556fa7d85c2c762de4abfe21 251 SUPERFAMILY SSF117143 77 209 1.09E-18 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BD65_695 4642b313556fa7d85c2c762de4abfe21 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 1.0E-21 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BD65_695 4642b313556fa7d85c2c762de4abfe21 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 1.1E-34 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BD65_1806 69f8a539a71f6c160a06ec08a8481735 623 Gene3D G3DSA:2.40.170.20 157 623 1.7E-141 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BD65_1806 69f8a539a71f6c160a06ec08a8481735 623 Gene3D G3DSA:2.170.130.10 25 156 9.1E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BD65_1806 69f8a539a71f6c160a06ec08a8481735 623 SUPERFAMILY SSF56935 31 623 1.83E-124 T 14-10-2018 BD65_1806 69f8a539a71f6c160a06ec08a8481735 623 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 3 623 8.3E-205 T 14-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 BD65_1806 69f8a539a71f6c160a06ec08a8481735 623 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 151 2.1E-26 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BD65_1806 69f8a539a71f6c160a06ec08a8481735 623 Pfam PF00593 TonB dependent receptor 176 622 1.0E-46 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BD65_1806 69f8a539a71f6c160a06ec08a8481735 623 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 606 623 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site BD65_1806 69f8a539a71f6c160a06ec08a8481735 623 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 3 623 34.701 T 14-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 BD65_2370 d4358d43e0af169659e90f55024cb097 438 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 431 1.1E-238 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 BD65_2370 d4358d43e0af169659e90f55024cb097 438 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 36.301 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 BD65_2370 d4358d43e0af169659e90f55024cb097 438 Pfam PF13520 Amino acid permease 9 403 3.2E-45 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_2370 d4358d43e0af169659e90f55024cb097 438 PIRSF PIRSF006060 1 438 5.9E-49 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_2370 d4358d43e0af169659e90f55024cb097 438 Gene3D G3DSA:1.20.1740.10 1 436 3.0E-57 T 14-10-2018 BD65_2370 d4358d43e0af169659e90f55024cb097 438 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 429 2.7E-141 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 BD65_3124 ae8646028815177790e52239f6b9eeec 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 1.5E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps BD65_3124 ae8646028815177790e52239f6b9eeec 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.5E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps BD65_3124 ae8646028815177790e52239f6b9eeec 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 1.5E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps BD65_3124 ae8646028815177790e52239f6b9eeec 167 SUPERFAMILY SSF47240 10 167 5.75E-49 T 14-10-2018 IPR009078 Ferritin-like superfamily BD65_3124 ae8646028815177790e52239f6b9eeec 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 44.983 T 14-10-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 BD65_3124 ae8646028815177790e52239f6b9eeec 167 PIRSF PIRSF005900 8 167 2.7E-41 T 14-10-2018 IPR002177 DNA-binding protein Dps BD65_3124 ae8646028815177790e52239f6b9eeec 167 Pfam PF00210 Ferritin-like domain 30 166 4.8E-22 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BD65_3124 ae8646028815177790e52239f6b9eeec 167 Gene3D G3DSA:1.20.1260.10 1 167 1.4E-51 T 14-10-2018 IPR012347 Ferritin-like BD65_3124 ae8646028815177790e52239f6b9eeec 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BD65_2899 6698e1879241f7223c65740fe6d7d141 199 Gene3D G3DSA:3.40.50.1110 13 199 1.3E-69 T 14-10-2018 IPR036514 SGNH hydrolase superfamily BD65_2899 6698e1879241f7223c65740fe6d7d141 199 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 19 176 1.7E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain BD65_2899 6698e1879241f7223c65740fe6d7d141 199 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 16 26 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 BD65_2899 6698e1879241f7223c65740fe6d7d141 199 SUPERFAMILY SSF52266 14 191 3.81E-50 T 14-10-2018 BD65_2758 eea512e24e59a82d6c2229062a89cc16 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 1.1E-115 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 BD65_2758 eea512e24e59a82d6c2229062a89cc16 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 46.927 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 BD65_2758 eea512e24e59a82d6c2229062a89cc16 447 Pfam PF11973 NQRA C-terminal domain 262 310 3.3E-22 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 BD65_2758 eea512e24e59a82d6c2229062a89cc16 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 7.9E-184 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 BD65_991 c2bc9c23548bf0780003d2f7f2fc72ab 489 Gene3D G3DSA:1.25.40.10 252 486 8.4E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_991 c2bc9c23548bf0780003d2f7f2fc72ab 489 Gene3D G3DSA:3.30.2010.10 74 152 3.7E-6 T 14-10-2018 BD65_991 c2bc9c23548bf0780003d2f7f2fc72ab 489 Pfam PF01435 Peptidase family M48 73 260 1.1E-28 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BD65_991 c2bc9c23548bf0780003d2f7f2fc72ab 489 Pfam PF14559 Tetratricopeptide repeat 355 420 2.5E-9 T 14-10-2018 BD65_991 c2bc9c23548bf0780003d2f7f2fc72ab 489 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 486 40.583 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 BD65_991 c2bc9c23548bf0780003d2f7f2fc72ab 489 SUPERFAMILY SSF48452 314 430 2.16E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 Gene3D G3DSA:3.40.50.80 275 393 7.4E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 Gene3D G3DSA:3.10.20.30 34 125 7.8E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 Pfam PF00970 Oxidoreductase FAD-binding domain 203 266 1.2E-8 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 PIRSF PIRSF000044 1 407 1.7E-216 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 SUPERFAMILY SSF52343 255 402 1.57E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 SUPERFAMILY SSF54292 37 124 1.16E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 SUPERFAMILY SSF63380 105 272 1.95E-34 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 3.0E-233 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.173 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 114 1.7E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 Gene3D G3DSA:2.40.30.10 126 264 1.3E-48 T 14-10-2018 BD65_2763 ab6a58943cafb1325867298b53f48fc8 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 1.6E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BD65_3007 cb3fad4b71950af47b23a625f4f5c8b6 177 PIRSF PIRSF019401 57 177 1.6E-30 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 BD65_3007 cb3fad4b71950af47b23a625f4f5c8b6 177 PIRSF PIRSF019401 1 70 1.9E-17 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 BD65_3007 cb3fad4b71950af47b23a625f4f5c8b6 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 42.096 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 BD65_3007 cb3fad4b71950af47b23a625f4f5c8b6 177 Pfam PF03925 SeqA protein C-terminal domain 67 175 7.2E-47 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 BD65_3007 cb3fad4b71950af47b23a625f4f5c8b6 177 Gene3D G3DSA:1.20.1380.10 64 177 8.6E-45 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 BD65_3007 cb3fad4b71950af47b23a625f4f5c8b6 177 SUPERFAMILY SSF82808 62 177 1.31E-47 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 BD65_3007 cb3fad4b71950af47b23a625f4f5c8b6 177 Gene3D G3DSA:1.10.1220.10 1 40 7.1E-25 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BD65_3007 cb3fad4b71950af47b23a625f4f5c8b6 177 SUPERFAMILY SSF47598 1 35 6.67E-14 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BD65_3007 cb3fad4b71950af47b23a625f4f5c8b6 177 Pfam PF17206 SeqA protein N-terminal domain 1 36 6.4E-25 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal BD65_1035 6d5467449fbb04daaa87a7d080c4ddd7 398 PIRSF PIRSF006004 23 391 7.9E-147 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 BD65_1035 6d5467449fbb04daaa87a7d080c4ddd7 398 Gene3D G3DSA:3.20.20.70 93 363 4.8E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1035 6d5467449fbb04daaa87a7d080c4ddd7 398 Pfam PF04055 Radical SAM superfamily 134 303 4.5E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_1035 6d5467449fbb04daaa87a7d080c4ddd7 398 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 31 378 74.828 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BD65_1035 6d5467449fbb04daaa87a7d080c4ddd7 398 Gene3D G3DSA:1.10.150.530 12 92 2.9E-30 T 14-10-2018 BD65_1035 6d5467449fbb04daaa87a7d080c4ddd7 398 SUPERFAMILY SSF102114 130 348 1.18E-14 T 14-10-2018 BD65_1035 6d5467449fbb04daaa87a7d080c4ddd7 398 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 28 383 3.9E-171 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BD65_2534 8e07b44f097bf523f8626d38db58eac9 553 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 3.6E-43 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BD65_2534 8e07b44f097bf523f8626d38db58eac9 553 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 553 65.217 T 14-10-2018 IPR023767 Transcriptional regulator SgrR BD65_2534 8e07b44f097bf523f8626d38db58eac9 553 Gene3D G3DSA:3.40.190.10 113 318 9.0E-34 T 14-10-2018 BD65_2534 8e07b44f097bf523f8626d38db58eac9 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 7.8E-19 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BD65_2534 8e07b44f097bf523f8626d38db58eac9 553 SUPERFAMILY SSF53850 117 550 1.81E-64 T 14-10-2018 BD65_2534 8e07b44f097bf523f8626d38db58eac9 553 SUPERFAMILY SSF46785 4 56 2.85E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1689 cd24675fbe3762375d54b4a9e3898409 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.042 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BD65_1689 cd24675fbe3762375d54b4a9e3898409 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BD65_1689 cd24675fbe3762375d54b4a9e3898409 251 Gene3D G3DSA:3.40.50.150 31 251 2.8E-74 T 14-10-2018 BD65_1689 cd24675fbe3762375d54b4a9e3898409 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 18 250 4.3E-104 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BD65_1689 cd24675fbe3762375d54b4a9e3898409 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BD65_1689 cd24675fbe3762375d54b4a9e3898409 251 SUPERFAMILY SSF53335 19 248 2.01E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1689 cd24675fbe3762375d54b4a9e3898409 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 5.8E-86 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BD65_457 0983f94b7f29df06d3a7592da15f6c0b 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 1.8E-111 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 BD65_457 0983f94b7f29df06d3a7592da15f6c0b 248 Pfam PF00005 ABC transporter 17 172 7.2E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_457 0983f94b7f29df06d3a7592da15f6c0b 248 SMART SM00382 26 223 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_457 0983f94b7f29df06d3a7592da15f6c0b 248 Gene3D G3DSA:3.40.50.300 1 248 1.8E-65 T 14-10-2018 BD65_457 0983f94b7f29df06d3a7592da15f6c0b 248 SUPERFAMILY SSF52540 2 231 1.13E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_457 0983f94b7f29df06d3a7592da15f6c0b 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1188 c66c7306469e6c440039670c56123ae4 451 SMART SM00228 115 186 0.026 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_1188 c66c7306469e6c440039670c56123ae4 451 SMART SM00228 211 280 1.0E-5 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_1188 c66c7306469e6c440039670c56123ae4 451 SUPERFAMILY SSF50156 86 193 5.13E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BD65_1188 c66c7306469e6c440039670c56123ae4 451 Pfam PF02163 Peptidase family M50 10 439 5.6E-88 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BD65_1188 c66c7306469e6c440039670c56123ae4 451 Gene3D G3DSA:2.30.42.10 127 220 1.6E-31 T 14-10-2018 BD65_1188 c66c7306469e6c440039670c56123ae4 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 450 1.7E-159 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 BD65_1188 c66c7306469e6c440039670c56123ae4 451 Gene3D G3DSA:2.30.42.10 222 310 4.0E-19 T 14-10-2018 BD65_1188 c66c7306469e6c440039670c56123ae4 451 SUPERFAMILY SSF50156 194 290 2.08E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BD65_1188 c66c7306469e6c440039670c56123ae4 451 Pfam PF13180 PDZ domain 225 286 2.1E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_2981 74ff404fc0f74d61cf6455c8d0d37e14 157 Pfam PF02130 Uncharacterized protein family UPF0054 20 143 3.7E-38 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BD65_2981 74ff404fc0f74d61cf6455c8d0d37e14 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.176 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BD65_2981 74ff404fc0f74d61cf6455c8d0d37e14 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site BD65_2981 74ff404fc0f74d61cf6455c8d0d37e14 157 Gene3D G3DSA:3.40.390.30 1 155 2.2E-59 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 BD65_2981 74ff404fc0f74d61cf6455c8d0d37e14 157 SUPERFAMILY SSF55486 3 151 6.1E-49 T 14-10-2018 BD65_2981 74ff404fc0f74d61cf6455c8d0d37e14 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 1.3E-35 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BD65_1837 89b79f77c1f36d99a8a963522876c292 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 5.3E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1837 89b79f77c1f36d99a8a963522876c292 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 5.3E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1837 89b79f77c1f36d99a8a963522876c292 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.3E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1837 89b79f77c1f36d99a8a963522876c292 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.0E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1837 89b79f77c1f36d99a8a963522876c292 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.521 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1837 89b79f77c1f36d99a8a963522876c292 71 SUPERFAMILY SSF143800 1 66 1.96E-26 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1837 89b79f77c1f36d99a8a963522876c292 71 Gene3D G3DSA:2.30.170.50 1 70 1.3E-32 T 14-10-2018 BD65_1837 89b79f77c1f36d99a8a963522876c292 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1837 89b79f77c1f36d99a8a963522876c292 71 Pfam PF01197 Ribosomal protein L31 1 64 3.7E-29 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2289 9b738b9d1f3dabf60e921cc37e222e15 463 SUPERFAMILY SSF53613 191 458 4.7E-75 T 14-10-2018 IPR029056 Ribokinase-like BD65_2289 9b738b9d1f3dabf60e921cc37e222e15 463 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 1 178 2.4E-45 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BD65_2289 9b738b9d1f3dabf60e921cc37e222e15 463 PIRSF PIRSF017184 1 463 9.7E-142 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 BD65_2289 9b738b9d1f3dabf60e921cc37e222e15 463 Gene3D G3DSA:3.40.1190.20 185 458 7.1E-85 T 14-10-2018 IPR029056 Ribokinase-like BD65_2289 9b738b9d1f3dabf60e921cc37e222e15 463 Pfam PF03853 YjeF-related protein N-terminus 1 158 4.1E-41 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BD65_2289 9b738b9d1f3dabf60e921cc37e222e15 463 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 193 462 23.126 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BD65_2289 9b738b9d1f3dabf60e921cc37e222e15 463 Gene3D G3DSA:3.40.50.10260 1 184 1.1E-51 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 BD65_2289 9b738b9d1f3dabf60e921cc37e222e15 463 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 192 458 1.2E-79 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BD65_2289 9b738b9d1f3dabf60e921cc37e222e15 463 SUPERFAMILY SSF64153 1 214 6.28E-57 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 BD65_2289 9b738b9d1f3dabf60e921cc37e222e15 463 Pfam PF01256 Carbohydrate kinase 217 454 5.9E-70 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BD65_3171 fedc6ad39a5d7d4827b1e56a07c17aa5 196 Gene3D G3DSA:3.40.50.880 1 196 5.2E-68 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_3171 fedc6ad39a5d7d4827b1e56a07c17aa5 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 34.053 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BD65_3171 fedc6ad39a5d7d4827b1e56a07c17aa5 196 SUPERFAMILY SSF52317 3 195 6.01E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_3171 fedc6ad39a5d7d4827b1e56a07c17aa5 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 1.6E-70 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BD65_3171 fedc6ad39a5d7d4827b1e56a07c17aa5 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 14-10-2018 BD65_3171 fedc6ad39a5d7d4827b1e56a07c17aa5 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 14-10-2018 BD65_3171 fedc6ad39a5d7d4827b1e56a07c17aa5 196 Pfam PF00117 Glutamine amidotransferase class-I 16 194 1.7E-17 T 14-10-2018 IPR017926 Glutamine amidotransferase BD65_3171 fedc6ad39a5d7d4827b1e56a07c17aa5 196 PIRSF PIRSF000495 1 196 3.9E-63 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 Gene3D G3DSA:2.40.30.130 461 561 2.1E-9 T 14-10-2018 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 Pfam PF02272 DHHA1 domain 734 870 8.0E-30 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 SUPERFAMILY SSF101353 255 464 1.44E-60 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 SUPERFAMILY SSF55681 4 254 4.22E-109 T 14-10-2018 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 2.1E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.1E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 2.1E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 2.1E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 2.1E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 Gene3D G3DSA:3.30.980.10 562 696 2.3E-51 T 14-10-2018 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 205.617 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 SMART SM00863 652 695 3.8E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 Gene3D G3DSA:3.10.310.40 763 871 1.3E-35 T 14-10-2018 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 Pfam PF01411 tRNA synthetases class II (A) 7 553 1.8E-234 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 SUPERFAMILY SSF55186 551 710 3.4E-52 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 853 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 Gene3D G3DSA:3.30.54.20 623 676 2.3E-51 T 14-10-2018 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 Gene3D G3DSA:3.30.930.10 2 251 6.9E-123 T 14-10-2018 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 7.1E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BD65_2711 71fba6decb2447665232e81fb9dd0f44 874 SUPERFAMILY SSF50447 454 551 9.53E-19 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_2902 70ecee69a91d048079e71a79bc1730f1 355 Gene3D G3DSA:3.30.1490.20 94 151 2.1E-20 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BD65_2902 70ecee69a91d048079e71a79bc1730f1 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 330 6.3E-109 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BD65_2902 70ecee69a91d048079e71a79bc1730f1 355 Gene3D G3DSA:3.30.470.20 152 355 2.0E-79 T 14-10-2018 BD65_2902 70ecee69a91d048079e71a79bc1730f1 355 Pfam PF02222 ATP-grasp domain 88 254 1.1E-52 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BD65_2902 70ecee69a91d048079e71a79bc1730f1 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.679 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BD65_2902 70ecee69a91d048079e71a79bc1730f1 355 SUPERFAMILY SSF51246 278 353 7.85E-20 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BD65_2902 70ecee69a91d048079e71a79bc1730f1 355 SUPERFAMILY SSF56059 79 274 2.42E-55 T 14-10-2018 BD65_2902 70ecee69a91d048079e71a79bc1730f1 355 Gene3D G3DSA:3.40.50.20 1 70 3.2E-31 T 14-10-2018 BD65_2902 70ecee69a91d048079e71a79bc1730f1 355 SUPERFAMILY SSF52440 2 74 1.58E-15 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BD65_2368 dd9506820680dc44e40a622b9e09899a 103 Pfam PF01541 GIY-YIG catalytic domain 6 74 1.7E-12 T 14-10-2018 IPR000305 GIY-YIG endonuclease BD65_2368 dd9506820680dc44e40a622b9e09899a 103 Gene3D G3DSA:3.40.1440.10 2 100 8.5E-26 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BD65_2368 dd9506820680dc44e40a622b9e09899a 103 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 3 95 30.644 T 14-10-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease BD65_2368 dd9506820680dc44e40a622b9e09899a 103 SUPERFAMILY SSF82771 6 73 1.28E-11 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BD65_89 29dd2cfc503cce09b91514e66f2a1433 208 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 66 80 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BD65_89 29dd2cfc503cce09b91514e66f2a1433 208 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 35 206 2.0E-57 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BD65_89 29dd2cfc503cce09b91514e66f2a1433 208 SUPERFAMILY SSF55120 29 206 6.72E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_89 29dd2cfc503cce09b91514e66f2a1433 208 Gene3D G3DSA:3.30.70.1560 95 195 8.3E-42 T 14-10-2018 BD65_89 29dd2cfc503cce09b91514e66f2a1433 208 Pfam PF00849 RNA pseudouridylate synthase 60 176 4.2E-13 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_89 29dd2cfc503cce09b91514e66f2a1433 208 Gene3D G3DSA:3.30.70.580 19 94 2.7E-26 T 14-10-2018 BD65_2120 d6f65bad5a9710afa4ba23b3bbf6e03d 477 Gene3D G3DSA:3.40.50.2000 249 458 5.3E-188 T 14-10-2018 BD65_2120 d6f65bad5a9710afa4ba23b3bbf6e03d 477 Pfam PF08323 Starch synthase catalytic domain 2 233 5.0E-71 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BD65_2120 d6f65bad5a9710afa4ba23b3bbf6e03d 477 SUPERFAMILY SSF53756 3 476 9.42E-115 T 14-10-2018 BD65_2120 d6f65bad5a9710afa4ba23b3bbf6e03d 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 4.1E-169 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BD65_2120 d6f65bad5a9710afa4ba23b3bbf6e03d 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 45.587 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BD65_2120 d6f65bad5a9710afa4ba23b3bbf6e03d 477 Pfam PF00534 Glycosyl transferases group 1 289 439 8.3E-13 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BD65_2120 d6f65bad5a9710afa4ba23b3bbf6e03d 477 Gene3D G3DSA:3.40.50.2000 3 473 5.3E-188 T 14-10-2018 BD65_1634 295a510f7281b095b2747706b091a495 427 SUPERFAMILY SSF51246 329 424 6.8E-33 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BD65_1634 295a510f7281b095b2747706b091a495 427 SUPERFAMILY SSF56059 104 323 7.07E-67 T 14-10-2018 BD65_1634 295a510f7281b095b2747706b091a495 427 Gene3D G3DSA:3.40.50.20 2 95 6.0E-37 T 14-10-2018 BD65_1634 295a510f7281b095b2747706b091a495 427 SMART SM01210 330 423 4.9E-55 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1634 295a510f7281b095b2747706b091a495 427 Gene3D G3DSA:3.90.600.10 330 424 6.7E-34 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1634 295a510f7281b095b2747706b091a495 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 5.0E-34 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1634 295a510f7281b095b2747706b091a495 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1634 295a510f7281b095b2747706b091a495 427 SMART SM01209 103 296 6.3E-140 T 14-10-2018 BD65_1634 295a510f7281b095b2747706b091a495 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.2E-182 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1634 295a510f7281b095b2747706b091a495 427 Gene3D G3DSA:3.30.1490.20 122 190 2.5E-27 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BD65_1634 295a510f7281b095b2747706b091a495 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.225 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1634 295a510f7281b095b2747706b091a495 427 SUPERFAMILY SSF52440 1 103 5.75E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BD65_1634 295a510f7281b095b2747706b091a495 427 Gene3D G3DSA:3.30.470.20 191 329 1.2E-61 T 14-10-2018 BD65_1634 295a510f7281b095b2747706b091a495 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 1.4E-28 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1634 295a510f7281b095b2747706b091a495 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 5.2E-83 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1928 cdba8cb3a4c0c1d1ed82cfa5705741af 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 4.2E-43 T 14-10-2018 IPR013527 YicC-like, N-terminal BD65_1928 cdba8cb3a4c0c1d1ed82cfa5705741af 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.7E-34 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 BD65_1928 cdba8cb3a4c0c1d1ed82cfa5705741af 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.7E-130 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 BD65_864 a036a753888e22e338d46c7c72373648 209 SUPERFAMILY SSF47616 78 204 1.28E-37 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BD65_864 a036a753888e22e338d46c7c72373648 209 Gene3D G3DSA:3.40.30.10 4 88 3.1E-83 T 14-10-2018 BD65_864 a036a753888e22e338d46c7c72373648 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 80 5.9E-13 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BD65_864 a036a753888e22e338d46c7c72373648 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 112 197 4.5E-15 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal BD65_864 a036a753888e22e338d46c7c72373648 209 SUPERFAMILY SSF52833 1 84 6.73E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_864 a036a753888e22e338d46c7c72373648 209 Gene3D G3DSA:1.20.1050.10 89 198 3.1E-83 T 14-10-2018 BD65_69 aa70ccfe187828531f214ad8e3dfb314 289 Gene3D G3DSA:3.90.1200.10 110 284 9.5E-20 T 14-10-2018 BD65_69 aa70ccfe187828531f214ad8e3dfb314 289 Hamap MF_01604 Thiamine kinase [thiK]. 9 284 41.146 T 14-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 BD65_69 aa70ccfe187828531f214ad8e3dfb314 289 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 28 284 2.3E-93 T 14-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 BD65_69 aa70ccfe187828531f214ad8e3dfb314 289 SUPERFAMILY SSF56112 10 284 2.19E-35 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BD65_69 aa70ccfe187828531f214ad8e3dfb314 289 Pfam PF01636 Phosphotransferase enzyme family 33 237 1.4E-17 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase BD65_1142 682811f53215320114c32cc74bc8b06e 399 SUPERFAMILY SSF52540 43 271 2.83E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1142 682811f53215320114c32cc74bc8b06e 399 Pfam PF00571 CBS domain 346 393 3.9E-6 T 14-10-2018 IPR000644 CBS domain BD65_1142 682811f53215320114c32cc74bc8b06e 399 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1142 682811f53215320114c32cc74bc8b06e 399 SUPERFAMILY SSF54631 276 396 2.78E-13 T 14-10-2018 BD65_1142 682811f53215320114c32cc74bc8b06e 399 Gene3D G3DSA:3.10.580.10 295 395 8.4E-10 T 14-10-2018 BD65_1142 682811f53215320114c32cc74bc8b06e 399 Pfam PF00005 ABC transporter 45 192 6.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1142 682811f53215320114c32cc74bc8b06e 399 SMART SM00382 53 242 6.0E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1142 682811f53215320114c32cc74bc8b06e 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 394 1.9E-174 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 BD65_1142 682811f53215320114c32cc74bc8b06e 399 Gene3D G3DSA:3.40.50.300 34 287 3.6E-78 T 14-10-2018 BD65_2570 584f66d24b10d39a46cc64828d6bf9d4 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 2.8E-198 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 BD65_2570 584f66d24b10d39a46cc64828d6bf9d4 347 Gene3D G3DSA:3.20.20.70 1 345 1.4E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2570 584f66d24b10d39a46cc64828d6bf9d4 347 SMART SM01240 7 344 2.3E-139 T 14-10-2018 BD65_2570 584f66d24b10d39a46cc64828d6bf9d4 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 6.3E-79 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 BD65_2570 584f66d24b10d39a46cc64828d6bf9d4 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.443 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 BD65_2570 584f66d24b10d39a46cc64828d6bf9d4 347 PIRSF PIRSF000235 1 347 1.4E-198 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 BD65_2570 584f66d24b10d39a46cc64828d6bf9d4 347 SUPERFAMILY SSF51412 7 335 6.02E-100 T 14-10-2018 BD65_2570 584f66d24b10d39a46cc64828d6bf9d4 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 BD65_3204 434f8b42f04f687ac986389b33ad29be 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 215 3.9E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_3204 434f8b42f04f687ac986389b33ad29be 222 Gene3D G3DSA:1.10.3720.10 1 216 3.7E-40 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3204 434f8b42f04f687ac986389b33ad29be 222 SUPERFAMILY SSF161098 6 201 4.06E-28 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3204 434f8b42f04f687ac986389b33ad29be 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 107 5.7E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 Pfam PF04052 TolB amino-terminal domain 23 122 6.4E-33 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 427 1.9E-158 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 Gene3D G3DSA:2.120.10.30 165 430 4.6E-113 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 4 426 49.758 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 SUPERFAMILY SSF69304 155 428 3.01E-55 T 14-10-2018 BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 Gene3D G3DSA:3.40.50.10070 19 164 1.7E-52 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.5E-9 T 14-10-2018 IPR011659 WD40-like Beta Propeller BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 398 0.0042 T 14-10-2018 IPR011659 WD40-like Beta Propeller BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 2.8E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 Pfam PF07676 WD40-like Beta Propeller Repeat 282 315 9.3E-10 T 14-10-2018 IPR011659 WD40-like Beta Propeller BD65_3044 94efb89f5caac9e64fe9df83eedce626 430 SUPERFAMILY SSF52964 28 161 2.48E-40 T 14-10-2018 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 276 7.4E-126 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 SUPERFAMILY SSF48150 2 225 5.97E-79 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 SMART SM00525 191 211 1.0E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 Pfam PF00633 Helix-hairpin-helix motif 99 127 6.6E-9 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 Pfam PF14815 NUDIX domain 234 343 2.1E-23 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 Gene3D G3DSA:1.10.340.30 21 132 3.8E-90 T 14-10-2018 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 SMART SM00478 39 190 2.4E-51 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 SUPERFAMILY SSF55811 220 345 2.16E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 Gene3D G3DSA:1.10.1670.10 10 211 3.8E-90 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 Gene3D G3DSA:3.90.79.10 223 350 2.5E-13 T 14-10-2018 BD65_1321 1e8bc1d9bb115c07d118bb823d894ea6 365 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 166 5.3E-22 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BD65_2539 ca8cc8f29c3ba3a567c40e2bdf14864e 363 Gene3D G3DSA:3.40.718.10 1 362 5.7E-151 T 14-10-2018 BD65_2539 ca8cc8f29c3ba3a567c40e2bdf14864e 363 SUPERFAMILY SSF53659 2 360 8.06E-119 T 14-10-2018 BD65_2539 ca8cc8f29c3ba3a567c40e2bdf14864e 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 50.33 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BD65_2539 ca8cc8f29c3ba3a567c40e2bdf14864e 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 2.1E-162 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BD65_2539 ca8cc8f29c3ba3a567c40e2bdf14864e 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 5.4E-130 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BD65_2539 ca8cc8f29c3ba3a567c40e2bdf14864e 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BD65_2539 ca8cc8f29c3ba3a567c40e2bdf14864e 363 SMART SM01329 6 355 6.2E-188 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BD65_1323 8737c433391ae9e053879ce57732ef8f 358 Pfam PF11873 Domain of unknown function (DUF3393) 3 190 2.3E-77 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal BD65_1323 8737c433391ae9e053879ce57732ef8f 358 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 60.565 T 14-10-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 BD65_1323 8737c433391ae9e053879ce57732ef8f 358 Gene3D G3DSA:1.10.530.10 178 354 5.6E-50 T 14-10-2018 BD65_1323 8737c433391ae9e053879ce57732ef8f 358 Pfam PF01464 Transglycosylase SLT domain 195 318 2.5E-33 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 BD65_1323 8737c433391ae9e053879ce57732ef8f 358 SUPERFAMILY SSF53955 155 356 4.79E-37 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_1323 8737c433391ae9e053879ce57732ef8f 358 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BD65_164 175813bf51369559cf03df8c415e88a0 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 1.3E-16 T 14-10-2018 IPR000182 GNAT domain BD65_164 175813bf51369559cf03df8c415e88a0 194 Gene3D G3DSA:3.40.630.30 10 192 6.6E-45 T 14-10-2018 BD65_164 175813bf51369559cf03df8c415e88a0 194 SUPERFAMILY SSF55729 12 186 3.92E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2631 d78416df2dda0a274c9106b840493d6d 481 SUPERFAMILY SSF52540 27 241 1.67E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2631 d78416df2dda0a274c9106b840493d6d 481 SUPERFAMILY SSF50447 248 336 1.04E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_2631 d78416df2dda0a274c9106b840493d6d 481 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 40 221 2.6E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 Gene3D G3DSA:2.40.30.10 338 440 5.4E-28 T 14-10-2018 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 PRINTS PR00315 GTP-binding elongation factor signature 96 104 8.6E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 PRINTS PR00315 GTP-binding elongation factor signature 116 126 8.6E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 PRINTS PR00315 GTP-binding elongation factor signature 35 48 8.6E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 PRINTS PR00315 GTP-binding elongation factor signature 169 178 8.6E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 PRINTS PR00315 GTP-binding elongation factor signature 132 143 8.6E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 Gene3D G3DSA:2.40.30.10 248 335 6.1E-25 T 14-10-2018 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 Gene3D G3DSA:3.40.50.300 13 246 3.2E-72 T 14-10-2018 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 34 440 5.4E-203 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 89 104 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BD65_2631 d78416df2dda0a274c9106b840493d6d 481 SUPERFAMILY SSF50465 340 441 2.78E-28 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BD65_2631 d78416df2dda0a274c9106b840493d6d 481 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 25 481 53.169 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BD65_2631 d78416df2dda0a274c9106b840493d6d 481 Pfam PF00009 Elongation factor Tu GTP binding domain 32 233 1.5E-44 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_447 87c3394c1b72e5cbbdab57ad0359003e 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 50.186 T 14-10-2018 IPR022913 Multidrug resistance protein MdtK BD65_447 87c3394c1b72e5cbbdab57ad0359003e 457 PIRSF PIRSF006603 2 452 1.1E-62 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BD65_447 87c3394c1b72e5cbbdab57ad0359003e 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 1.7E-117 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BD65_447 87c3394c1b72e5cbbdab57ad0359003e 457 Pfam PF01554 MatE 17 177 1.5E-36 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BD65_447 87c3394c1b72e5cbbdab57ad0359003e 457 Pfam PF01554 MatE 244 405 5.6E-37 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BD65_2202 f3291c82b33187203542a097c8a2f2b6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.8E-71 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BD65_2202 f3291c82b33187203542a097c8a2f2b6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.254 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BD65_2202 f3291c82b33187203542a097c8a2f2b6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2202 f3291c82b33187203542a097c8a2f2b6 156 SUPERFAMILY SSF47973 6 149 4.06E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BD65_2202 f3291c82b33187203542a097c8a2f2b6 156 Gene3D G3DSA:1.10.455.10 2 155 1.5E-64 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BD65_2202 f3291c82b33187203542a097c8a2f2b6 156 PIRSF PIRSF002122 3 156 1.1E-63 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 BD65_2202 f3291c82b33187203542a097c8a2f2b6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 9.8E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain BD65_1184 f55d88570305114c377a209bb6f5647f 161 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.261 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BD65_1184 f55d88570305114c377a209bb6f5647f 161 Gene3D G3DSA:3.10.129.10 5 148 2.5E-68 T 14-10-2018 BD65_1184 f55d88570305114c377a209bb6f5647f 161 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 4.0E-60 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BD65_1184 f55d88570305114c377a209bb6f5647f 161 Pfam PF07977 FabA-like domain 17 141 5.3E-40 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BD65_1184 f55d88570305114c377a209bb6f5647f 161 SUPERFAMILY SSF54637 10 151 9.06E-51 T 14-10-2018 IPR029069 HotDog domain superfamily BD65_1502 56206f9c5b704532cf4477edcbc87d28 419 Gene3D G3DSA:3.65.10.10 7 413 2.3E-174 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BD65_1502 56206f9c5b704532cf4477edcbc87d28 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.458 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_1502 56206f9c5b704532cf4477edcbc87d28 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 9.3E-127 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BD65_1502 56206f9c5b704532cf4477edcbc87d28 419 Gene3D G3DSA:3.65.10.10 21 228 2.3E-174 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BD65_1502 56206f9c5b704532cf4477edcbc87d28 419 SUPERFAMILY SSF55205 1 418 4.41E-147 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BD65_1502 56206f9c5b704532cf4477edcbc87d28 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 4.7E-185 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.6E-101 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 Pfam PF08676 MutL C terminal dimerisation domain 443 572 3.1E-26 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.5E-38 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 SUPERFAMILY SSF54211 191 330 1.44E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 1.7E-11 T 14-10-2018 BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 SMART SM00853 446 581 3.7E-15 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 Gene3D G3DSA:2.30.42.20 443 619 1.3E-65 T 14-10-2018 BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 SMART SM01340 212 330 1.3E-57 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 SUPERFAMILY SSF55874 1 204 3.14E-55 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 620 25.629 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 Gene3D G3DSA:3.30.565.10 1 216 1.7E-70 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 Gene3D G3DSA:3.30.230.10 217 329 7.8E-42 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 Gene3D G3DSA:3.30.1370.100 487 575 1.3E-65 T 14-10-2018 BD65_2292 7b7c342ec509d484d18e80f9ee603384 623 SUPERFAMILY SSF118116 441 618 1.29E-42 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily BD65_3238 9b647e8f3212677a25be9af2b278fd8d 285 Pfam PF01226 Formate/nitrite transporter 15 276 4.8E-76 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BD65_3238 9b647e8f3212677a25be9af2b278fd8d 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 3.9E-131 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 BD65_3238 9b647e8f3212677a25be9af2b278fd8d 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site BD65_3238 9b647e8f3212677a25be9af2b278fd8d 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 5.9E-94 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BD65_3238 9b647e8f3212677a25be9af2b278fd8d 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site BD65_3238 9b647e8f3212677a25be9af2b278fd8d 285 Gene3D G3DSA:1.20.1080.10 1 268 1.4E-104 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 5.0E-75 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 SUPERFAMILY SSF52540 1 212 5.33E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 Pfam PF00406 Adenylate kinase 5 185 1.7E-60 T 14-10-2018 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 Gene3D G3DSA:3.40.50.300 1 214 6.8E-79 T 14-10-2018 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 51.745 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.2E-13 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 BD65_2872 0e5b9c19ba73ddf5aab9676bdad2fb06 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BD65_1879 7d39898f16c4cb904e67d2a46ef64275 368 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 341 1.2E-90 T 14-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid BD65_1879 7d39898f16c4cb904e67d2a46ef64275 368 Pfam PF05125 Phage major capsid protein, P2 family 8 339 7.2E-142 T 14-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid BD65_1192 5d64bbeca14c08889b9b7ed37dd8a4d0 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.49 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BD65_1192 5d64bbeca14c08889b9b7ed37dd8a4d0 185 Gene3D G3DSA:3.30.1360.40 35 100 5.6E-31 T 14-10-2018 BD65_1192 5d64bbeca14c08889b9b7ed37dd8a4d0 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.1E-78 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BD65_1192 5d64bbeca14c08889b9b7ed37dd8a4d0 185 Gene3D G3DSA:1.10.132.20 101 185 3.9E-28 T 14-10-2018 BD65_1192 5d64bbeca14c08889b9b7ed37dd8a4d0 185 SUPERFAMILY SSF55194 2 184 2.75E-71 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 BD65_1192 5d64bbeca14c08889b9b7ed37dd8a4d0 185 Pfam PF01765 Ribosome recycling factor 20 183 4.6E-64 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 BD65_1192 5d64bbeca14c08889b9b7ed37dd8a4d0 185 Gene3D G3DSA:1.10.132.20 1 34 3.5E-6 T 14-10-2018 BD65_2749 39ac9072395147bf9731589f8c92bcef 251 PIRSF PIRSF005457 1 251 1.2E-92 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BD65_2749 39ac9072395147bf9731589f8c92bcef 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 46.168 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BD65_2749 39ac9072395147bf9731589f8c92bcef 251 Gene3D G3DSA:3.60.15.10 1 251 1.3E-97 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_2749 39ac9072395147bf9731589f8c92bcef 251 SUPERFAMILY SSF56281 1 251 4.06E-69 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_2749 39ac9072395147bf9731589f8c92bcef 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 1.7E-23 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BD65_2749 39ac9072395147bf9731589f8c92bcef 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 2.9E-105 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BD65_2749 39ac9072395147bf9731589f8c92bcef 251 Pfam PF00753 Metallo-beta-lactamase superfamily 14 165 6.0E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_2749 39ac9072395147bf9731589f8c92bcef 251 SMART SM00849 11 165 4.7E-38 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_724 8ef5c15ce2d15388b9c64931f29c1a1e 66 PRINTS PR00050 Cold shock protein signature 24 33 1.7E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_724 8ef5c15ce2d15388b9c64931f29c1a1e 66 PRINTS PR00050 Cold shock protein signature 3 18 1.7E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_724 8ef5c15ce2d15388b9c64931f29c1a1e 66 PRINTS PR00050 Cold shock protein signature 39 57 1.7E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_724 8ef5c15ce2d15388b9c64931f29c1a1e 66 Pfam PF00313 'Cold-shock' DNA-binding domain 1 65 2.7E-33 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_724 8ef5c15ce2d15388b9c64931f29c1a1e 66 Gene3D G3DSA:2.40.50.140 1 66 1.1E-30 T 14-10-2018 BD65_724 8ef5c15ce2d15388b9c64931f29c1a1e 66 SMART SM00357 2 66 1.1E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_724 8ef5c15ce2d15388b9c64931f29c1a1e 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 33 - T 14-10-2018 IPR019844 Cold-shock conserved site BD65_724 8ef5c15ce2d15388b9c64931f29c1a1e 66 SUPERFAMILY SSF50249 2 65 1.52E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_724 8ef5c15ce2d15388b9c64931f29c1a1e 66 PIRSF PIRSF002599 1 66 1.9E-25 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BD65_1881 d1b7266dfbc6f873305a03c1d51c61d2 589 Gene3D G3DSA:3.40.50.300 89 305 1.8E-19 T 14-10-2018 BD65_1881 d1b7266dfbc6f873305a03c1d51c61d2 589 Pfam PF17289 Terminase RNaseH-like domain 413 571 4.6E-41 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like BD65_1881 d1b7266dfbc6f873305a03c1d51c61d2 589 Pfam PF03237 Terminase-like family 164 385 1.5E-53 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type BD65_1881 d1b7266dfbc6f873305a03c1d51c61d2 589 Gene3D G3DSA:3.30.420.240 398 571 3.6E-11 T 14-10-2018 BD65_1881 d1b7266dfbc6f873305a03c1d51c61d2 589 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 12 69 3.9E-23 T 14-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 BD65_111 33ee08e5b397ffee061217a591cd36f9 292 Gene3D G3DSA:1.10.10.60 237 291 9.9E-17 T 14-10-2018 BD65_111 33ee08e5b397ffee061217a591cd36f9 292 Pfam PF12833 Helix-turn-helix domain 211 289 3.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_111 33ee08e5b397ffee061217a591cd36f9 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BD65_111 33ee08e5b397ffee061217a591cd36f9 292 Gene3D G3DSA:1.10.10.60 188 236 1.1E-13 T 14-10-2018 BD65_111 33ee08e5b397ffee061217a591cd36f9 292 SUPERFAMILY SSF46689 241 291 1.84E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_111 33ee08e5b397ffee061217a591cd36f9 292 SMART SM00342 205 288 7.4E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_111 33ee08e5b397ffee061217a591cd36f9 292 SUPERFAMILY SSF46689 189 239 3.09E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_801 b950389e7fd0cb4979804ea7fcaf2212 80 Gene3D G3DSA:3.30.910.10 1 79 1.7E-16 T 14-10-2018 IPR036687 DinI-like superfamily BD65_801 b950389e7fd0cb4979804ea7fcaf2212 80 SUPERFAMILY SSF54857 1 77 1.83E-21 T 14-10-2018 IPR036687 DinI-like superfamily BD65_801 b950389e7fd0cb4979804ea7fcaf2212 80 Pfam PF06183 DinI-like family 17 76 1.1E-22 T 14-10-2018 IPR010391 DNA damage-inducible protein DinI-like BD65_2788 71c1abacf18aef2009129d7ee004b76b 1227 SUPERFAMILY SSF52540 26 1199 1.8E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2788 71c1abacf18aef2009129d7ee004b76b 1227 Gene3D G3DSA:3.40.50.300 1 285 5.1E-45 T 14-10-2018 BD65_2788 71c1abacf18aef2009129d7ee004b76b 1227 SUPERFAMILY SSF52540 819 1214 5.92E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2788 71c1abacf18aef2009129d7ee004b76b 1227 Gene3D G3DSA:3.40.50.300 954 1221 1.0E-24 T 14-10-2018 BD65_2788 71c1abacf18aef2009129d7ee004b76b 1227 Pfam PF13476 AAA domain 5 231 4.3E-26 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain BD65_2788 71c1abacf18aef2009129d7ee004b76b 1227 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1111 1181 1.8E-14 T 14-10-2018 BD65_1797 6d4168157760492728b3b0d83bee6251 226 Pfam PF13276 HTH-like domain 42 92 1.2E-10 T 14-10-2018 IPR025948 HTH-like domain BD65_1797 6d4168157760492728b3b0d83bee6251 226 Gene3D G3DSA:3.30.420.10 113 226 6.8E-11 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_1797 6d4168157760492728b3b0d83bee6251 226 SUPERFAMILY SSF53098 109 223 2.28E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_1797 6d4168157760492728b3b0d83bee6251 226 Pfam PF00665 Integrase core domain 119 223 9.3E-24 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_3186 11f59adaff200930e13bc05435c94046 401 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 266 8.4E-97 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BD65_3186 11f59adaff200930e13bc05435c94046 401 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 377 6.9E-20 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_3186 11f59adaff200930e13bc05435c94046 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 1.4E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BD65_3186 11f59adaff200930e13bc05435c94046 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 1.4E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BD65_3186 11f59adaff200930e13bc05435c94046 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 1.4E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BD65_3186 11f59adaff200930e13bc05435c94046 401 Gene3D G3DSA:3.40.710.10 27 285 3.4E-90 T 14-10-2018 BD65_3186 11f59adaff200930e13bc05435c94046 401 Gene3D G3DSA:2.60.410.10 286 377 1.1E-24 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_3186 11f59adaff200930e13bc05435c94046 401 SMART SM00936 286 377 4.9E-28 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_3186 11f59adaff200930e13bc05435c94046 401 SUPERFAMILY SSF69189 286 379 7.65E-23 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_3186 11f59adaff200930e13bc05435c94046 401 SUPERFAMILY SSF56601 10 286 5.51E-80 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 5.4E-91 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 Gene3D G3DSA:3.40.50.300 189 498 1.1E-54 T 14-10-2018 BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.8E-43 T 14-10-2018 BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 SMART SM00382 210 390 7.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 5.9E-216 T 14-10-2018 IPR004482 Mg chelatase-related protein BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 SUPERFAMILY SSF52540 189 502 7.31E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 SUPERFAMILY SSF54211 10 169 1.67E-28 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 8.0E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 8.0E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 8.0E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 8.0E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BD65_1793 4c3b6e59373c4bd55f75fa33e1580368 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 1.9E-29 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain BD65_177 df623563c25f21649b3d2e4bd9b26962 271 Pfam PF01904 Protein of unknown function DUF72 20 248 1.4E-50 T 14-10-2018 IPR002763 Protein of unknown function DUF72 BD65_177 df623563c25f21649b3d2e4bd9b26962 271 Gene3D G3DSA:3.20.20.410 1 223 4.4E-40 T 14-10-2018 IPR036520 UPF0759 superfamily BD65_177 df623563c25f21649b3d2e4bd9b26962 271 SUPERFAMILY SSF117396 2 251 3.66E-63 T 14-10-2018 IPR036520 UPF0759 superfamily BD65_1066 d12512a545e40cd96781fc1a66574ede 445 SMART SM00448 7 118 6.9E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1066 d12512a545e40cd96781fc1a66574ede 445 Pfam PF00158 Sigma-54 interaction domain 137 303 1.7E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BD65_1066 d12512a545e40cd96781fc1a66574ede 445 Gene3D G3DSA:1.10.10.60 387 441 5.8E-10 T 14-10-2018 BD65_1066 d12512a545e40cd96781fc1a66574ede 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BD65_1066 d12512a545e40cd96781fc1a66574ede 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BD65_1066 d12512a545e40cd96781fc1a66574ede 445 Gene3D G3DSA:3.40.50.2300 4 131 1.6E-36 T 14-10-2018 BD65_1066 d12512a545e40cd96781fc1a66574ede 445 SMART SM00382 157 300 1.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1066 d12512a545e40cd96781fc1a66574ede 445 Pfam PF00072 Response regulator receiver domain 10 118 3.3E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1066 d12512a545e40cd96781fc1a66574ede 445 SUPERFAMILY SSF52540 137 381 6.13E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1066 d12512a545e40cd96781fc1a66574ede 445 Gene3D G3DSA:3.40.50.300 132 307 4.6E-63 T 14-10-2018 BD65_1066 d12512a545e40cd96781fc1a66574ede 445 SUPERFAMILY SSF46689 388 438 1.08E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1066 d12512a545e40cd96781fc1a66574ede 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BD65_1066 d12512a545e40cd96781fc1a66574ede 445 Gene3D G3DSA:1.10.8.60 308 386 4.5E-22 T 14-10-2018 BD65_1066 d12512a545e40cd96781fc1a66574ede 445 SUPERFAMILY SSF52172 6 181 2.99E-43 T 14-10-2018 IPR011006 CheY-like superfamily BD65_3151 2ac41ae5e057d004a971a86a85940a49 230 Pfam PF04172 LrgB-like family 11 223 1.8E-77 T 14-10-2018 IPR007300 CidB/LrgB family BD65_3151 2ac41ae5e057d004a971a86a85940a49 230 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 1 225 1.3E-100 T 14-10-2018 IPR005261 Conserved hypothetical protein CHP00659 BD65_865 a89bebfe2a656c0c76eb1dfcd317f901 302 SUPERFAMILY SSF51735 1 298 1.17E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_865 a89bebfe2a656c0c76eb1dfcd317f901 302 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 5.5E-111 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 BD65_865 a89bebfe2a656c0c76eb1dfcd317f901 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 3.3E-19 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BD65_865 a89bebfe2a656c0c76eb1dfcd317f901 302 Gene3D G3DSA:3.40.50.720 1 287 9.6E-77 T 14-10-2018 BD65_865 a89bebfe2a656c0c76eb1dfcd317f901 302 Pfam PF08338 Domain of unknown function (DUF1731) 250 295 1.8E-19 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 BD65_3190 6be5931f4be87031fe04cf30429e048e 223 Gene3D G3DSA:3.20.20.70 1 221 2.8E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_3190 6be5931f4be87031fe04cf30429e048e 223 SUPERFAMILY SSF51569 3 216 4.92E-78 T 14-10-2018 BD65_3190 6be5931f4be87031fe04cf30429e048e 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 213 7.4E-83 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BD65_3190 6be5931f4be87031fe04cf30429e048e 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 217 34.355 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 BD65_3190 6be5931f4be87031fe04cf30429e048e 223 Pfam PF01791 DeoC/LacD family aldolase 8 212 7.3E-19 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BD65_3190 6be5931f4be87031fe04cf30429e048e 223 PIRSF PIRSF001357 2 222 7.6E-73 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BD65_3190 6be5931f4be87031fe04cf30429e048e 223 SMART SM01133 4 215 6.9E-93 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BD65_1936 375a09d5744e35d5076436fe6cad7e46 569 SUPERFAMILY SSF56091 27 313 7.2E-63 T 14-10-2018 BD65_1936 375a09d5744e35d5076436fe6cad7e46 569 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 33 314 2.4E-22 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 BD65_1936 375a09d5744e35d5076436fe6cad7e46 569 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 328 343 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site BD65_1936 375a09d5744e35d5076436fe6cad7e46 569 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 319 392 3.3E-18 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 BD65_1936 375a09d5744e35d5076436fe6cad7e46 569 Gene3D G3DSA:3.30.470.90 95 314 5.8E-29 T 14-10-2018 BD65_1936 375a09d5744e35d5076436fe6cad7e46 569 Hamap MF_01587 DNA ligase B [ligB]. 3 565 50.377 T 14-10-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 BD65_1936 375a09d5744e35d5076436fe6cad7e46 569 SUPERFAMILY SSF47781 404 564 1.18E-19 T 14-10-2018 IPR010994 RuvA domain 2-like BD65_1936 375a09d5744e35d5076436fe6cad7e46 569 Gene3D G3DSA:2.40.50.140 315 387 2.8E-13 T 14-10-2018 BD65_1936 375a09d5744e35d5076436fe6cad7e46 569 SUPERFAMILY SSF50249 316 397 4.45E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_1936 375a09d5744e35d5076436fe6cad7e46 569 SMART SM00532 31 434 6.7E-38 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 BD65_3045 cf8ef61753005bd010a2a257e6afcd86 167 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 65 167 2.0E-46 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 BD65_3045 cf8ef61753005bd010a2a257e6afcd86 167 SUPERFAMILY SSF103088 54 166 2.22E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily BD65_3045 cf8ef61753005bd010a2a257e6afcd86 167 PRINTS PR01021 OMPA domain signature 67 89 1.3E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BD65_3045 cf8ef61753005bd010a2a257e6afcd86 167 PRINTS PR01021 OMPA domain signature 97 112 1.3E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BD65_3045 cf8ef61753005bd010a2a257e6afcd86 167 PRINTS PR01021 OMPA domain signature 112 128 1.3E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BD65_3045 cf8ef61753005bd010a2a257e6afcd86 167 Pfam PF00691 OmpA family 66 161 2.6E-21 T 14-10-2018 IPR006665 OmpA-like domain BD65_3045 cf8ef61753005bd010a2a257e6afcd86 167 Gene3D G3DSA:3.30.1330.60 38 167 1.4E-47 T 14-10-2018 IPR036737 OmpA-like domain superfamily BD65_3045 cf8ef61753005bd010a2a257e6afcd86 167 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 167 31.913 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 BD65_3045 cf8ef61753005bd010a2a257e6afcd86 167 ProSitePatterns PS01068 OmpA-like domain. 99 143 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 BD65_2231 c1ca87aaced6c0e7222f5c1f70ff2d28 129 PIRSF PIRSF002131 1 129 1.0E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BD65_2231 c1ca87aaced6c0e7222f5c1f70ff2d28 129 SUPERFAMILY SSF53137 15 129 4.58E-48 T 14-10-2018 BD65_2231 c1ca87aaced6c0e7222f5c1f70ff2d28 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.8E-55 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2231 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-54 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BD65_2231 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.637 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BD65_2231 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Gene3D G3DSA:3.30.420.80 1 129 1.5E-58 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 BD65_2231 c1ca87aaced6c0e7222f5c1f70ff2d28 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site BD65_2787 2aa28fd645d116a91ff72f11b396c8e2 302 Gene3D G3DSA:3.30.420.40 4 296 2.5E-79 T 14-10-2018 BD65_2787 2aa28fd645d116a91ff72f11b396c8e2 302 Pfam PF00480 ROK family 3 301 1.8E-85 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_2787 2aa28fd645d116a91ff72f11b396c8e2 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_2787 2aa28fd645d116a91ff72f11b396c8e2 302 SUPERFAMILY SSF53067 2 300 4.82E-60 T 14-10-2018 BD65_2787 2aa28fd645d116a91ff72f11b396c8e2 302 Gene3D G3DSA:3.30.420.40 119 289 2.5E-79 T 14-10-2018 BD65_2281 2a8780e40371e9398e61218f9628a895 1111 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 481 817 1.8E-116 T 14-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 BD65_2281 2a8780e40371e9398e61218f9628a895 1111 Pfam PF12795 Mechanosensitive ion channel porin domain 32 260 4.2E-64 T 14-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain BD65_2281 2a8780e40371e9398e61218f9628a895 1111 SUPERFAMILY SSF50182 921 986 9.81E-17 T 14-10-2018 IPR010920 LSM domain superfamily BD65_2281 2a8780e40371e9398e61218f9628a895 1111 Gene3D G3DSA:2.30.30.60 936 985 1.1E-10 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BD65_2281 2a8780e40371e9398e61218f9628a895 1111 SUPERFAMILY SSF82689 988 1086 1.44E-15 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BD65_2281 2a8780e40371e9398e61218f9628a895 1111 SUPERFAMILY SSF82861 836 919 2.09E-8 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BD65_2281 2a8780e40371e9398e61218f9628a895 1111 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 950 984 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 BD65_2281 2a8780e40371e9398e61218f9628a895 1111 Pfam PF00924 Mechanosensitive ion channel 878 1075 8.4E-53 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BD65_2281 2a8780e40371e9398e61218f9628a895 1111 Gene3D G3DSA:3.30.70.100 989 1081 9.5E-9 T 14-10-2018 BD65_201 280032c57d1979f512f8db13c1dbe304 373 SUPERFAMILY SSF47819 296 372 5.62E-22 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BD65_201 280032c57d1979f512f8db13c1dbe304 373 Pfam PF00570 HRDC domain 213 279 8.0E-16 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BD65_201 280032c57d1979f512f8db13c1dbe304 373 SMART SM00474 3 171 2.2E-44 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BD65_201 280032c57d1979f512f8db13c1dbe304 373 SUPERFAMILY SSF47819 194 300 1.5E-28 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BD65_201 280032c57d1979f512f8db13c1dbe304 373 Gene3D G3DSA:1.10.150.80 195 293 7.0E-22 T 14-10-2018 BD65_201 280032c57d1979f512f8db13c1dbe304 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 1.8E-146 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 BD65_201 280032c57d1979f512f8db13c1dbe304 373 Gene3D G3DSA:3.30.420.10 1 194 2.8E-64 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_201 280032c57d1979f512f8db13c1dbe304 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.653 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 BD65_201 280032c57d1979f512f8db13c1dbe304 373 SMART SM00341 210 289 1.4E-16 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BD65_201 280032c57d1979f512f8db13c1dbe304 373 Pfam PF01612 3'-5' exonuclease 3 167 6.5E-37 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BD65_201 280032c57d1979f512f8db13c1dbe304 373 Gene3D G3DSA:1.10.150.80 294 373 8.3E-28 T 14-10-2018 BD65_201 280032c57d1979f512f8db13c1dbe304 373 SUPERFAMILY SSF53098 2 210 1.95E-61 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_1622 a5585e56e84e943deb61d92ec4acdb1d 575 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 44.109 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 BD65_1622 a5585e56e84e943deb61d92ec4acdb1d 575 PIRSF PIRSF000719 1 575 4.5E-292 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 BD65_1622 a5585e56e84e943deb61d92ec4acdb1d 575 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 7 572 0.0 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 BD65_1622 a5585e56e84e943deb61d92ec4acdb1d 575 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 7.5E-253 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 1.2E-16 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 1.2E-16 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.2E-16 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 1.2E-16 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 40.172 T 14-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 1.8E-23 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 SUPERFAMILY SSF51735 1 203 3.33E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 371 1.2E-63 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 Gene3D G3DSA:1.10.1040.10 207 382 1.6E-68 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 Gene3D G3DSA:3.40.50.720 1 205 2.2E-81 T 14-10-2018 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_2043 c816ecc6ad4f801cf6111feb6de07cf4 387 SUPERFAMILY SSF48179 204 384 5.78E-46 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_3237 4b0d6ddcd07c90f0ab3cb3cd9da6f951 760 Pfam PF01228 Glycine radical 630 741 3.5E-43 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 BD65_3237 4b0d6ddcd07c90f0ab3cb3cd9da6f951 760 SUPERFAMILY SSF51998 4 758 8.85E-289 T 14-10-2018 BD65_3237 4b0d6ddcd07c90f0ab3cb3cd9da6f951 760 Gene3D G3DSA:3.20.70.20 2 760 0.0 T 14-10-2018 BD65_3237 4b0d6ddcd07c90f0ab3cb3cd9da6f951 760 PIRSF PIRSF000379 8 760 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 BD65_3237 4b0d6ddcd07c90f0ab3cb3cd9da6f951 760 Pfam PF02901 Pyruvate formate lyase-like 26 614 7.9E-205 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 BD65_3237 4b0d6ddcd07c90f0ab3cb3cd9da6f951 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 BD65_3237 4b0d6ddcd07c90f0ab3cb3cd9da6f951 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 Gene3D G3DSA:3.40.50.300 28 269 3.5E-81 T 14-10-2018 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 3.8E-170 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 Hamap MF_00268 Protein RecA [recA]. 7 331 50.644 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 SUPERFAMILY SSF54752 272 327 1.96E-20 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 SUPERFAMILY SSF52540 6 269 1.24E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 PRINTS PR00142 RecA protein signature 212 240 1.2E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 PRINTS PR00142 RecA protein signature 129 158 1.2E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 PRINTS PR00142 RecA protein signature 299 316 1.2E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 PRINTS PR00142 RecA protein signature 167 196 1.2E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 PRINTS PR00142 RecA protein signature 245 274 1.2E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 PRINTS PR00142 RecA protein signature 95 124 1.2E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 Pfam PF00154 recA bacterial DNA recombination protein 9 270 7.1E-141 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 SMART SM00382 59 230 1.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 ProSitePatterns PS00321 recA signature. 215 223 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 BD65_2709 5ba20697048fdc8ce9b1dea63d2d6698 356 Gene3D G3DSA:3.30.250.10 271 329 1.2E-25 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 Gene3D G3DSA:3.30.2090.10 188 278 1.1E-294 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 SUPERFAMILY SSF82693 49 142 1.62E-22 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 Gene3D G3DSA:3.30.70.1430 567 662 1.1E-294 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 SUPERFAMILY SSF82866 799 1025 2.75E-45 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 SUPERFAMILY SSF82714 719 801 1.7E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 SUPERFAMILY SSF82693 565 662 7.5E-16 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 Gene3D G3DSA:1.20.1640.10 19 512 1.1E-294 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.5E-83 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.5E-83 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.5E-83 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.5E-83 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.5E-83 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.5E-83 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.5E-83 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 1.5E-83 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 1.5E-83 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 Gene3D G3DSA:3.30.70.1440 663 861 1.1E-294 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1039 34.692 T 14-10-2018 IPR022831 Multidrug resistance protein MdtB BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 SUPERFAMILY SSF82866 299 498 4.84E-46 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 SUPERFAMILY SSF82693 146 333 8.55E-21 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 SUPERFAMILY SSF82714 192 275 3.53E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 Gene3D G3DSA:3.30.70.1320 144 335 1.1E-294 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 Gene3D G3DSA:3.30.70.1430 49 811 1.1E-294 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 Gene3D G3DSA:1.20.1640.10 513 1019 1.1E-294 T 14-10-2018 BD65_1012 fd5360ecc758edbede8b207403aa71e0 1045 Gene3D G3DSA:3.30.2090.10 715 803 1.1E-294 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 Gene3D G3DSA:3.20.80.10 125 294 3.3E-21 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 Gene3D G3DSA:1.10.10.60 58 123 1.9E-19 T 14-10-2018 BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 Pfam PF06445 GyrI-like small molecule binding domain 131 279 2.7E-13 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 SUPERFAMILY SSF46689 8 57 1.21E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 Pfam PF12833 Helix-turn-helix domain 30 106 1.1E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 SUPERFAMILY SSF55136 127 273 1.01E-14 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 Gene3D G3DSA:1.10.10.60 7 57 1.1E-20 T 14-10-2018 BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 2.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 2.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 SMART SM00342 23 106 2.8E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_315 619dff926e28fbe8533d7b856c9cee6c 295 SUPERFAMILY SSF46689 61 108 7.17E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_700 d20cb55e282c5b629f0150f4e314684f 219 Gene3D G3DSA:2.30.30.760 160 219 6.7E-25 T 14-10-2018 BD65_700 d20cb55e282c5b629f0150f4e314684f 219 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 2.7E-40 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BD65_700 d20cb55e282c5b629f0150f4e314684f 219 Pfam PF13144 Chaperone for flagella basal body P-ring formation 27 217 2.0E-47 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BD65_700 d20cb55e282c5b629f0150f4e314684f 219 SMART SM00858 95 157 2.0E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BD65_1492 a68d253f676def773d4e538e9ad93692 577 Gene3D G3DSA:3.10.20.310 73 163 9.4E-8 T 14-10-2018 BD65_1492 a68d253f676def773d4e538e9ad93692 577 Gene3D G3DSA:2.40.160.50 208 561 9.1E-56 T 14-10-2018 BD65_1492 a68d253f676def773d4e538e9ad93692 577 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 226 538 1.7E-23 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal BD65_1492 a68d253f676def773d4e538e9ad93692 577 Pfam PF08479 POTRA domain, ShlB-type 104 163 5.4E-7 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type BD65_2963 ab93eedd8a2c64d5192309020902a662 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 3.9E-25 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2963 ab93eedd8a2c64d5192309020902a662 403 Gene3D G3DSA:3.40.710.10 30 291 2.0E-90 T 14-10-2018 BD65_2963 ab93eedd8a2c64d5192309020902a662 403 SUPERFAMILY SSF56601 11 292 6.08E-78 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_2963 ab93eedd8a2c64d5192309020902a662 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 3.0E-99 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BD65_2963 ab93eedd8a2c64d5192309020902a662 403 SUPERFAMILY SSF69189 292 385 2.16E-25 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2963 ab93eedd8a2c64d5192309020902a662 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 1.4E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BD65_2963 ab93eedd8a2c64d5192309020902a662 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 1.4E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BD65_2963 ab93eedd8a2c64d5192309020902a662 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 1.4E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BD65_2963 ab93eedd8a2c64d5192309020902a662 403 SMART SM00936 292 383 5.3E-34 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2963 ab93eedd8a2c64d5192309020902a662 403 Gene3D G3DSA:2.60.410.10 292 383 8.2E-28 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 Gene3D G3DSA:2.60.40.1840 444 545 4.6E-35 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 SUPERFAMILY SSF55486 204 450 1.03E-73 T 14-10-2018 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 Pfam PF01433 Peptidase family M1 domain 208 439 1.4E-58 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 SUPERFAMILY SSF63737 1 193 4.32E-48 T 14-10-2018 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 Gene3D G3DSA:1.10.390.10 280 443 6.3E-65 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 Gene3D G3DSA:1.25.50.10 546 870 2.8E-124 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 870 4.4E-121 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 Gene3D G3DSA:1.10.1740.60 195 279 2.1E-40 T 14-10-2018 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 Gene3D G3DSA:2.60.40.1730 15 194 6.1E-71 T 14-10-2018 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 544 3.7E-32 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 2.4E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 2.4E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 2.4E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 2.4E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BD65_1 f4357cd4cf56624fb3770b2189ae7d86 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 2.4E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 356 2.0E-155 T 14-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 Gene3D G3DSA:2.40.10.10 142 256 3.6E-38 T 14-10-2018 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 SMART SM00228 257 343 1.6E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 Gene3D G3DSA:2.30.42.10 257 357 1.6E-20 T 14-10-2018 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 1.2E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 PRINTS PR00834 HtrA/DegQ protease family signature 90 102 1.2E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.2E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 PRINTS PR00834 HtrA/DegQ protease family signature 301 313 1.2E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 PRINTS PR00834 HtrA/DegQ protease family signature 111 131 1.2E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.2E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 SUPERFAMILY SSF50494 52 254 4.86E-58 T 14-10-2018 IPR009003 Peptidase S1, PA clan BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 Pfam PF13180 PDZ domain 283 351 1.2E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 Gene3D G3DSA:2.40.10.10 30 141 2.4E-28 T 14-10-2018 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 SUPERFAMILY SSF50156 239 351 9.6E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BD65_1501 1b92112e791c357eb811e4b94b4c07b9 358 Pfam PF13365 Trypsin-like peptidase domain 81 215 1.3E-28 T 14-10-2018 BD65_814 752d0c212d42c44a2e00ed95a02794fa 246 Pfam PF13489 Methyltransferase domain 57 186 1.4E-24 T 14-10-2018 BD65_814 752d0c212d42c44a2e00ed95a02794fa 246 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 2.8E-90 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 BD65_814 752d0c212d42c44a2e00ed95a02794fa 246 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 240 37.624 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 BD65_814 752d0c212d42c44a2e00ed95a02794fa 246 SUPERFAMILY SSF53335 20 238 4.59E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_814 752d0c212d42c44a2e00ed95a02794fa 246 Gene3D G3DSA:3.40.50.150 16 240 1.3E-77 T 14-10-2018 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 Gene3D G3DSA:2.40.160.10 22 364 4.4E-138 T 14-10-2018 IPR023614 Porin domain superfamily BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 Pfam PF00267 Gram-negative porin 27 364 2.8E-131 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.2E-65 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.2E-65 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 2.2E-65 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 245 262 2.2E-65 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 273 292 2.2E-65 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 2.2E-65 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 SUPERFAMILY SSF56935 22 364 7.06E-71 T 14-10-2018 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 319 336 2.0E-12 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 2.0E-12 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 2.0E-12 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 2.0E-12 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_126 4cd01d1adae9ea307a38f004496a80e1 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 239 251 2.0E-12 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_1958 280bf135119f9d35f11cb499e2735d8b 328 Gene3D G3DSA:1.20.1270.170 149 307 7.5E-122 T 14-10-2018 BD65_1958 280bf135119f9d35f11cb499e2735d8b 328 Gene3D G3DSA:1.10.510.10 60 258 7.5E-122 T 14-10-2018 BD65_1958 280bf135119f9d35f11cb499e2735d8b 328 SUPERFAMILY SSF56112 6 327 2.62E-88 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BD65_1958 280bf135119f9d35f11cb499e2735d8b 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.895 T 14-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BD65_1958 280bf135119f9d35f11cb499e2735d8b 328 Pfam PF01636 Phosphotransferase enzyme family 33 253 2.6E-43 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase BD65_1958 280bf135119f9d35f11cb499e2735d8b 328 Gene3D G3DSA:3.30.200.70 13 108 7.5E-122 T 14-10-2018 BD65_2833 6139dab7978b87f072734b6055649dec 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 6.5E-213 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BD65_2833 6139dab7978b87f072734b6055649dec 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.367 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BD65_2833 6139dab7978b87f072734b6055649dec 423 SMART SM00994 12 51 1.0E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BD65_2833 6139dab7978b87f072734b6055649dec 423 SUPERFAMILY SSF52540 63 403 6.49E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2833 6139dab7978b87f072734b6055649dec 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 393 9.3E-17 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BD65_2833 6139dab7978b87f072734b6055649dec 423 SMART SM00382 111 333 4.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2833 6139dab7978b87f072734b6055649dec 423 Gene3D G3DSA:3.30.50.30 2 52 9.3E-28 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily BD65_2833 6139dab7978b87f072734b6055649dec 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 14-10-2018 BD65_2833 6139dab7978b87f072734b6055649dec 423 SMART SM01086 317 412 1.5E-35 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BD65_2833 6139dab7978b87f072734b6055649dec 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BD65_2833 6139dab7978b87f072734b6055649dec 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 2.7E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_2833 6139dab7978b87f072734b6055649dec 423 Gene3D G3DSA:1.10.8.60 316 423 4.2E-42 T 14-10-2018 BD65_2833 6139dab7978b87f072734b6055649dec 423 Gene3D G3DSA:3.40.50.300 62 315 9.2E-108 T 14-10-2018 BD65_435 9cb4decc885b38c624180b7f9f74d75f 366 SUPERFAMILY SSF51395 3 364 1.35E-124 T 14-10-2018 BD65_435 9cb4decc885b38c624180b7f9f74d75f 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 3.5E-94 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BD65_435 9cb4decc885b38c624180b7f9f74d75f 366 Gene3D G3DSA:3.20.20.70 3 366 1.1E-142 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1014 fe917ec4f612470bc8365bd4f7ad6b74 469 Gene3D G3DSA:1.20.1720.10 16 244 2.3E-43 T 14-10-2018 BD65_1014 fe917ec4f612470bc8365bd4f7ad6b74 469 Pfam PF07690 Major Facilitator Superfamily 19 409 3.2E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_1014 fe917ec4f612470bc8365bd4f7ad6b74 469 Gene3D G3DSA:1.20.1250.20 270 465 3.4E-13 T 14-10-2018 BD65_1014 fe917ec4f612470bc8365bd4f7ad6b74 469 SUPERFAMILY SSF103473 10 456 2.88E-58 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_1014 fe917ec4f612470bc8365bd4f7ad6b74 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 4.4E-8 T 14-10-2018 BD65_1014 fe917ec4f612470bc8365bd4f7ad6b74 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 400 419 4.4E-8 T 14-10-2018 BD65_1014 fe917ec4f612470bc8365bd4f7ad6b74 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 4.4E-8 T 14-10-2018 BD65_1014 fe917ec4f612470bc8365bd4f7ad6b74 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 4.4E-8 T 14-10-2018 BD65_1014 fe917ec4f612470bc8365bd4f7ad6b74 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 4.4E-8 T 14-10-2018 BD65_1014 fe917ec4f612470bc8365bd4f7ad6b74 469 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 5 469 42.105 T 14-10-2018 IPR023721 Multidrug resistance protein MdtD, putative BD65_2 78c0e788289011d18b6c6a1af427f030 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BD65_2 78c0e788289011d18b6c6a1af427f030 336 Gene3D G3DSA:3.20.20.70 1 336 4.3E-146 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2 78c0e788289011d18b6c6a1af427f030 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BD65_2 78c0e788289011d18b6c6a1af427f030 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.328 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BD65_2 78c0e788289011d18b6c6a1af427f030 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 1.7E-91 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 BD65_2 78c0e788289011d18b6c6a1af427f030 336 PIRSF PIRSF000164 12 336 1.1E-94 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 BD65_2 78c0e788289011d18b6c6a1af427f030 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.2E-157 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BD65_2 78c0e788289011d18b6c6a1af427f030 336 SUPERFAMILY SSF51395 1 334 1.28E-104 T 14-10-2018 BD65_336 22a3cc061baea7ba53a705f22416a02b 103 Pfam PF06649 Protein of unknown function (DUF1161) 45 98 5.0E-26 T 14-10-2018 IPR010595 Protein of unknown function DUF1161 BD65_336 22a3cc061baea7ba53a705f22416a02b 103 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 23 98 8.0E-22 T 14-10-2018 IPR010595 Protein of unknown function DUF1161 BD65_3092 1c14baaca7a3dcb86d8168a4aa7d2851 206 Pfam PF09209 Domain of unknown function (DUF1956) 97 205 2.2E-29 T 14-10-2018 IPR015292 Transcription regulator YbiH, C-terminal BD65_3092 1c14baaca7a3dcb86d8168a4aa7d2851 206 Gene3D G3DSA:1.10.10.60 4 65 6.4E-25 T 14-10-2018 BD65_3092 1c14baaca7a3dcb86d8168a4aa7d2851 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 2.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_3092 1c14baaca7a3dcb86d8168a4aa7d2851 206 SUPERFAMILY SSF48498 93 205 4.67E-29 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BD65_3092 1c14baaca7a3dcb86d8168a4aa7d2851 206 Gene3D G3DSA:1.10.357.10 66 206 3.4E-40 T 14-10-2018 BD65_3092 1c14baaca7a3dcb86d8168a4aa7d2851 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 2.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_3092 1c14baaca7a3dcb86d8168a4aa7d2851 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 2.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_3092 1c14baaca7a3dcb86d8168a4aa7d2851 206 SUPERFAMILY SSF46689 7 82 5.64E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_3092 1c14baaca7a3dcb86d8168a4aa7d2851 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BD65_995 db3c97a266408025e2f53e202faafd13 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.498 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BD65_995 db3c97a266408025e2f53e202faafd13 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.1E-88 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BD65_995 db3c97a266408025e2f53e202faafd13 208 SUPERFAMILY SSF53271 4 206 1.97E-65 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BD65_995 db3c97a266408025e2f53e202faafd13 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.1E-63 T 14-10-2018 BD65_995 db3c97a266408025e2f53e202faafd13 208 Gene3D G3DSA:3.40.50.2020 1 208 6.8E-71 T 14-10-2018 BD65_1472 d2608bec6e3f80a131a1549f4e15b410 109 Hamap MF_00904 Modulator protein MzrA [mzrA]. 1 99 23.738 T 14-10-2018 IPR026574 Modulator protein MzrA BD65_1472 d2608bec6e3f80a131a1549f4e15b410 109 Gene3D G3DSA:3.30.70.260 14 93 3.3E-33 T 14-10-2018 BD65_1472 d2608bec6e3f80a131a1549f4e15b410 109 Pfam PF13721 SecD export protein N-terminal TM region 3 86 1.3E-15 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain BD65_3042 ddc55e459d2c69b35644de5f4d4f2047 142 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 6 140 28.191 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 BD65_3042 ddc55e459d2c69b35644de5f4d4f2047 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 1.2E-38 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 BD65_3042 ddc55e459d2c69b35644de5f4d4f2047 142 Gene3D G3DSA:3.30.420.270 60 133 4.0E-25 T 14-10-2018 BD65_3042 ddc55e459d2c69b35644de5f4d4f2047 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 1.6E-24 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 SUPERFAMILY SSF51735 232 376 1.85E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 Gene3D G3DSA:3.40.50.720 2 139 9.8E-51 T 14-10-2018 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 Gene3D G3DSA:3.40.50.720 233 366 1.1E-35 T 14-10-2018 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 SUPERFAMILY SSF51735 1 152 2.14E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 SUPERFAMILY SSF116726 148 226 2.75E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.0E-35 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.0E-35 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.0E-35 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.0E-35 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.0E-35 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 Pfam PF02080 TrkA-C domain 390 451 9.7E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 Pfam PF02080 TrkA-C domain 156 225 6.1E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 Gene3D G3DSA:3.30.70.1450 367 458 3.3E-28 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 Pfam PF02254 TrkA-N domain 235 350 2.2E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 Pfam PF02254 TrkA-N domain 3 124 4.8E-31 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 SUPERFAMILY SSF116726 390 440 3.27E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_2238 9fa80e7f2c76336835ff3b0d9841154c 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-22 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 Gene3D G3DSA:3.40.50.11610 723 929 8.6E-174 T 14-10-2018 BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 SMART SM00861 593 786 9.6E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 Pfam PF00676 Dehydrogenase E1 component 221 514 4.1E-51 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 Gene3D G3DSA:3.40.50.970 167 533 8.5E-150 T 14-10-2018 BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 PIRSF PIRSF000157 1 934 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 Pfam PF02779 Transketolase, pyrimidine binding domain 592 787 2.6E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 Gene3D G3DSA:1.10.287.1150 84 166 6.0E-30 T 14-10-2018 BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 8.2E-54 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 Gene3D G3DSA:3.40.50.12470 556 802 8.6E-174 T 14-10-2018 BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 1.8E-16 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 SUPERFAMILY SSF52518 121 543 4.12E-89 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_3031 e70a3e71d123ebbb5a8a1dbdfdd7cfae 935 SUPERFAMILY SSF52518 577 793 1.57E-51 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_704 b892f6772556ab788898df8cf538398e 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 14-10-2018 IPR025505 FHIPEP conserved site BD65_704 b892f6772556ab788898df8cf538398e 692 Pfam PF00771 FHIPEP family 31 681 2.3E-266 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_704 b892f6772556ab788898df8cf538398e 692 Gene3D G3DSA:3.40.30.60 361 504 1.5E-50 T 14-10-2018 BD65_704 b892f6772556ab788898df8cf538398e 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 1.2E-277 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 BD65_704 b892f6772556ab788898df8cf538398e 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 1.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_704 b892f6772556ab788898df8cf538398e 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 1.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_704 b892f6772556ab788898df8cf538398e 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 1.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_704 b892f6772556ab788898df8cf538398e 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 1.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_704 b892f6772556ab788898df8cf538398e 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 1.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_704 b892f6772556ab788898df8cf538398e 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 1.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_704 b892f6772556ab788898df8cf538398e 692 PIRSF PIRSF005419 14 692 9.4E-240 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_704 b892f6772556ab788898df8cf538398e 692 Gene3D G3DSA:1.10.8.540 505 593 4.3E-29 T 14-10-2018 BD65_704 b892f6772556ab788898df8cf538398e 692 Gene3D G3DSA:1.10.490.80 596 689 7.0E-8 T 14-10-2018 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 SUPERFAMILY SSF56935 22 376 2.38E-85 T 14-10-2018 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 1.0E-68 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.0E-68 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 1.0E-68 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 1.0E-68 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 284 303 1.0E-68 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 246 263 1.0E-68 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 Pfam PF00267 Gram-negative porin 27 376 7.6E-146 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 Gene3D G3DSA:2.40.160.10 22 376 6.4E-154 T 14-10-2018 IPR023614 Porin domain superfamily BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 240 252 1.8E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.8E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.8E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 1.8E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 328 345 1.8E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_807 949c5faf5e05e3dea25ce08b8aaaa1df 376 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 328 344 - T 14-10-2018 IPR013793 Porin, Gram-negative type, conserved site BD65_1511 46430cb74a44b983f3114f3488245954 187 PIRSF PIRSF006118 12 187 1.0E-72 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BD65_1511 46430cb74a44b983f3114f3488245954 187 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 158 3.9E-10 T 14-10-2018 BD65_1511 46430cb74a44b983f3114f3488245954 187 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 25 177 1.2E-68 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BD65_1511 46430cb74a44b983f3114f3488245954 187 Gene3D G3DSA:3.40.50.1000 2 187 2.3E-60 T 14-10-2018 IPR023214 HAD superfamily BD65_1511 46430cb74a44b983f3114f3488245954 187 SUPERFAMILY SSF56784 21 180 2.59E-42 T 14-10-2018 IPR036412 HAD-like superfamily BD65_3123 d91176c246c04e3d23a59ea6a6c4ffb2 246 SMART SM00062 25 244 1.1E-68 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_3123 d91176c246c04e3d23a59ea6a6c4ffb2 246 Gene3D G3DSA:3.40.190.10 34 241 2.8E-84 T 14-10-2018 BD65_3123 d91176c246c04e3d23a59ea6a6c4ffb2 246 SMART SM00079 25 243 8.6E-8 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BD65_3123 d91176c246c04e3d23a59ea6a6c4ffb2 246 Gene3D G3DSA:3.40.190.10 109 204 2.8E-84 T 14-10-2018 BD65_3123 d91176c246c04e3d23a59ea6a6c4ffb2 246 SUPERFAMILY SSF53850 8 243 1.44E-72 T 14-10-2018 BD65_3123 d91176c246c04e3d23a59ea6a6c4ffb2 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 242 1.8E-67 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_3123 d91176c246c04e3d23a59ea6a6c4ffb2 246 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site BD65_1307 a40ba1868e1e1903c6efb0d42c24f084 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 2.2E-58 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BD65_1307 a40ba1868e1e1903c6efb0d42c24f084 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 26.221 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BD65_1307 a40ba1868e1e1903c6efb0d42c24f084 141 SUPERFAMILY SSF53098 4 138 1.27E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_1307 a40ba1868e1e1903c6efb0d42c24f084 141 Gene3D G3DSA:3.30.420.140 2 138 2.4E-46 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BD65_1307 a40ba1868e1e1903c6efb0d42c24f084 141 Pfam PF03652 Holliday junction resolvase 5 136 4.0E-43 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BD65_1307 a40ba1868e1e1903c6efb0d42c24f084 141 SMART SM00732 4 104 7.8E-44 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BD65_17 1ff88401b762ac65006a5fdebe7b2321 711 Pfam PF13515 Fusaric acid resistance protein-like 407 526 2.0E-24 T 14-10-2018 BD65_17 1ff88401b762ac65006a5fdebe7b2321 711 Pfam PF12805 FUSC-like inner membrane protein yccS 68 347 1.7E-111 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal BD65_17 1ff88401b762ac65006a5fdebe7b2321 711 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 707 0.0 T 14-10-2018 IPR010019 Integral membrane protein, YccS BD65_17 1ff88401b762ac65006a5fdebe7b2321 711 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 706 4.7E-295 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK BD65_1411 6658577bea0f6c08f96f5732824c3bbe 148 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 58 148 3.0E-32 T 14-10-2018 IPR004914 Antirestriction protein BD65_1411 6658577bea0f6c08f96f5732824c3bbe 148 Gene3D G3DSA:1.10.472.120 4 148 2.2E-58 T 14-10-2018 BD65_1411 6658577bea0f6c08f96f5732824c3bbe 148 Pfam PF03230 Antirestriction protein 58 148 7.5E-36 T 14-10-2018 IPR004914 Antirestriction protein BD65_1055 738cbf36ff42e42a48e4e30a4d473676 422 SUPERFAMILY SSF63520 209 328 1.7E-20 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 BD65_1055 738cbf36ff42e42a48e4e30a4d473676 422 Pfam PF00874 PRD domain 236 324 1.5E-18 T 14-10-2018 IPR011608 PRD domain GO:0006355 BD65_1055 738cbf36ff42e42a48e4e30a4d473676 422 Gene3D G3DSA:1.10.1790.10 227 327 1.8E-15 T 14-10-2018 BD65_2616 703746adac9aea86f062e6506778a2f0 437 Gene3D G3DSA:2.40.50.140 1 87 9.7E-31 T 14-10-2018 BD65_2616 703746adac9aea86f062e6506778a2f0 437 Pfam PF01938 TRAM domain 12 66 6.3E-9 T 14-10-2018 IPR002792 TRAM domain BD65_2616 703746adac9aea86f062e6506778a2f0 437 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 264 434 4.3E-26 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BD65_2616 703746adac9aea86f062e6506778a2f0 437 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 437 62.407 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 BD65_2616 703746adac9aea86f062e6506778a2f0 437 Gene3D G3DSA:3.40.50.150 88 432 1.8E-119 T 14-10-2018 BD65_2616 703746adac9aea86f062e6506778a2f0 437 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 369 399 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site BD65_2616 703746adac9aea86f062e6506778a2f0 437 SUPERFAMILY SSF50249 2 67 7.42E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2616 703746adac9aea86f062e6506778a2f0 437 SUPERFAMILY SSF53335 75 437 2.95E-82 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2616 703746adac9aea86f062e6506778a2f0 437 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 420 430 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BD65_2616 703746adac9aea86f062e6506778a2f0 437 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 430 4.8E-138 T 14-10-2018 BD65_2616 703746adac9aea86f062e6506778a2f0 437 Gene3D G3DSA:3.40.1350.30 134 270 1.8E-119 T 14-10-2018 BD65_1625 0a6471c78633cadb0b9642e2bfd50fb4 309 SUPERFAMILY SSF52317 17 297 2.64E-99 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_1625 0a6471c78633cadb0b9642e2bfd50fb4 309 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.454 T 14-10-2018 IPR033752 MetA family BD65_1625 0a6471c78633cadb0b9642e2bfd50fb4 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 3.7E-158 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 BD65_1625 0a6471c78633cadb0b9642e2bfd50fb4 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 6.0E-136 T 14-10-2018 BD65_1625 0a6471c78633cadb0b9642e2bfd50fb4 309 Gene3D G3DSA:3.40.50.880 1 301 1.6E-118 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_1625 0a6471c78633cadb0b9642e2bfd50fb4 309 PIRSF PIRSF000450 1 308 5.7E-145 T 14-10-2018 IPR033752 MetA family BD65_1625 0a6471c78633cadb0b9642e2bfd50fb4 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 3.8E-130 T 14-10-2018 IPR033752 MetA family BD65_548 477305190005db12855a087b85fe0158 220 Gene3D G3DSA:3.30.420.10 3 170 1.4E-44 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_548 477305190005db12855a087b85fe0158 220 Pfam PF00929 Exonuclease 5 148 7.3E-14 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BD65_548 477305190005db12855a087b85fe0158 220 SMART SM00479 2 157 4.5E-34 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BD65_548 477305190005db12855a087b85fe0158 220 SUPERFAMILY SSF53098 1 182 1.57E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 Gene3D G3DSA:3.40.50.620 7 285 4.5E-113 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 SUPERFAMILY SSF52374 7 286 3.56E-88 T 14-10-2018 BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 Gene3D G3DSA:3.40.50.620 82 219 4.5E-113 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 7 291 41.361 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 3.1E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 PRINTS PR00987 Glutamyl-tRNA synthetase signature 171 181 3.1E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 PRINTS PR00987 Glutamyl-tRNA synthetase signature 187 195 3.1E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 3.1E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 3.1E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 7 266 3.1E-112 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 BD65_2601 fc36f33951c7b098e5284face6cbd1c9 304 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 10 238 7.7E-46 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 5.8E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.8E-221 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 SUPERFAMILY SSF52540 90 371 1.28E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 Gene3D G3DSA:2.40.50.140 48 117 1.3E-35 T 14-10-2018 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 SMART SM00382 170 355 4.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 250.291 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.1E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 Gene3D G3DSA:1.10.720.10 1 47 1.2E-23 T 14-10-2018 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 SMART SM00357 52 118 9.6E-19 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.7E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 Gene3D G3DSA:3.40.50.300 130 417 2.0E-133 T 14-10-2018 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 SMART SM00959 5 47 2.9E-16 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BD65_1779 09e26c5cc5f6b849ea8fafb353a9c33d 419 SUPERFAMILY SSF68912 1 46 1.65E-11 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily BD65_2656 742d7ed3f70fae9485c9233ee524f13f 149 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 97 8.5E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2656 742d7ed3f70fae9485c9233ee524f13f 149 Gene3D G3DSA:1.10.10.10 10 106 4.6E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2656 742d7ed3f70fae9485c9233ee524f13f 149 SUPERFAMILY SSF46894 10 99 3.4E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_1117 eb991774073c912fc9404f31c387541d 266 Gene3D G3DSA:3.30.420.10 107 241 8.5E-21 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_1117 eb991774073c912fc9404f31c387541d 266 SUPERFAMILY SSF53098 101 261 3.29E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_1117 eb991774073c912fc9404f31c387541d 266 Pfam PF00665 Integrase core domain 108 221 3.1E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_979 450433a97013152346c8cb302bcec921 375 Gene3D G3DSA:3.40.630.10 8 360 5.3E-123 T 14-10-2018 BD65_979 450433a97013152346c8cb302bcec921 375 SUPERFAMILY SSF55031 179 286 1.42E-26 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BD65_979 450433a97013152346c8cb302bcec921 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 51.609 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 BD65_979 450433a97013152346c8cb302bcec921 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BD65_979 450433a97013152346c8cb302bcec921 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 6.1E-42 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 BD65_979 450433a97013152346c8cb302bcec921 375 Pfam PF07687 Peptidase dimerisation domain 175 282 5.3E-23 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain BD65_979 450433a97013152346c8cb302bcec921 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 3.6E-174 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 BD65_979 450433a97013152346c8cb302bcec921 375 SUPERFAMILY SSF53187 5 373 1.51E-63 T 14-10-2018 BD65_979 450433a97013152346c8cb302bcec921 375 Gene3D G3DSA:3.30.70.360 179 292 5.3E-123 T 14-10-2018 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 5.1E-71 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 5.1E-71 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 5.1E-71 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 5.1E-71 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 5.1E-71 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 5.1E-71 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 5.1E-71 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 5.1E-71 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 Gene3D G3DSA:2.60.120.10 6 275 3.0E-141 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_329 352c47079d36c6c128e90d4e571a35c6 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 Pfam PF01238 Phosphomannose isomerase type I 1 355 1.9E-97 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 Gene3D G3DSA:1.10.441.10 150 300 3.0E-141 T 14-10-2018 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 PIRSF PIRSF001480 1 391 2.9E-105 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 385 6.6E-114 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BD65_329 352c47079d36c6c128e90d4e571a35c6 391 SUPERFAMILY SSF51182 1 374 7.5E-98 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BD65_329 352c47079d36c6c128e90d4e571a35c6 391 Gene3D G3DSA:2.60.120.10 301 382 3.0E-141 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_2911 2b78ddabf240cddbd249eb3e8cfb365f 781 Pfam PF13954 PapC N-terminal domain 2 113 3.2E-25 T 14-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 BD65_2911 2b78ddabf240cddbd249eb3e8cfb365f 781 Pfam PF00577 Outer membrane usher protein 131 681 9.5E-183 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BD65_2911 2b78ddabf240cddbd249eb3e8cfb365f 781 Gene3D G3DSA:2.60.40.2070 690 767 2.6E-29 T 14-10-2018 BD65_2911 2b78ddabf240cddbd249eb3e8cfb365f 781 Gene3D G3DSA:2.60.40.3110 205 293 2.4E-28 T 14-10-2018 BD65_2911 2b78ddabf240cddbd249eb3e8cfb365f 781 Pfam PF13953 PapC C-terminal domain 693 748 3.3E-13 T 14-10-2018 IPR025949 PapC-like, C-terminal domain BD65_2911 2b78ddabf240cddbd249eb3e8cfb365f 781 SUPERFAMILY SSF141729 2 105 5.62E-26 T 14-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 BD65_2911 2b78ddabf240cddbd249eb3e8cfb365f 781 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 247 257 - T 14-10-2018 IPR018030 Fimbrial membrane usher, conserved site BD65_2911 2b78ddabf240cddbd249eb3e8cfb365f 781 Gene3D G3DSA:3.10.20.410 1 102 2.1E-13 T 14-10-2018 BD65_2911 2b78ddabf240cddbd249eb3e8cfb365f 781 Gene3D G3DSA:2.60.40.2610 593 686 1.1E-13 T 14-10-2018 BD65_1206 874ddb62e1e94811e0fd7c35d44a64d0 251 SUPERFAMILY SSF47807 160 243 1.18E-23 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BD65_1206 874ddb62e1e94811e0fd7c35d44a64d0 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 250 5.2E-26 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BD65_1206 874ddb62e1e94811e0fd7c35d44a64d0 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 154 2.2E-30 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BD65_1206 874ddb62e1e94811e0fd7c35d44a64d0 251 SUPERFAMILY SSF88723 4 159 2.32E-39 T 14-10-2018 IPR029060 PIN-like domain superfamily BD65_1206 874ddb62e1e94811e0fd7c35d44a64d0 251 SMART SM00475 3 250 7.8E-92 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BD65_1206 874ddb62e1e94811e0fd7c35d44a64d0 251 Gene3D G3DSA:1.10.150.20 162 251 9.2E-29 T 14-10-2018 BD65_1206 874ddb62e1e94811e0fd7c35d44a64d0 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 44.274 T 14-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 BD65_1206 874ddb62e1e94811e0fd7c35d44a64d0 251 SMART SM00279 162 197 3.9E-10 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BD65_1206 874ddb62e1e94811e0fd7c35d44a64d0 251 Gene3D G3DSA:3.40.50.1010 1 161 2.6E-57 T 14-10-2018 BD65_982 e0561d3628c170d4565da6215bac4ca8 229 SUPERFAMILY SSF53474 5 206 1.39E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_982 e0561d3628c170d4565da6215bac4ca8 229 Gene3D G3DSA:3.40.50.1820 1 207 1.0E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_982 e0561d3628c170d4565da6215bac4ca8 229 Pfam PF02230 Phospholipase/Carboxylesterase 4 207 1.5E-41 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 Gene3D G3DSA:4.10.320.10 317 362 4.4E-22 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 Gene3D G3DSA:2.40.50.100 1 78 7.6E-20 T 14-10-2018 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 Gene3D G3DSA:2.40.50.100 199 278 4.8E-21 T 14-10-2018 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 Gene3D G3DSA:2.40.50.100 103 181 6.7E-21 T 14-10-2018 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 SUPERFAMILY SSF47005 311 356 2.88E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 Pfam PF02817 e3 binding domain 317 352 5.2E-15 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 SUPERFAMILY SSF51230 103 193 4.58E-22 T 14-10-2018 IPR011053 Single hybrid motif BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 Gene3D G3DSA:3.30.559.10 373 621 2.2E-100 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 SUPERFAMILY SSF52777 379 620 3.16E-80 T 14-10-2018 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 178 621 5.9E-218 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 SUPERFAMILY SSF51230 200 287 1.83E-22 T 14-10-2018 IPR011053 Single hybrid motif BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 390 620 4.9E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 SUPERFAMILY SSF51230 1 94 2.09E-21 T 14-10-2018 IPR011053 Single hybrid motif BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 223 252 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 Pfam PF00364 Biotin-requiring enzyme 105 174 4.0E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 Pfam PF00364 Biotin-requiring enzyme 202 271 8.0E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 Pfam PF00364 Biotin-requiring enzyme 4 73 2.6E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BD65_2581 3c27fe205f4b743d038593ee85fb416e 621 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 126 155 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BD65_857 8dfe2ad8fae0a08afcc800f423f4155c 343 Gene3D G3DSA:1.10.260.40 3 70 7.3E-22 T 14-10-2018 BD65_857 8dfe2ad8fae0a08afcc800f423f4155c 343 SMART SM00354 12 82 6.1E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_857 8dfe2ad8fae0a08afcc800f423f4155c 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 4.6E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_857 8dfe2ad8fae0a08afcc800f423f4155c 343 SUPERFAMILY SSF53822 70 321 2.12E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_857 8dfe2ad8fae0a08afcc800f423f4155c 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 14-10-2018 BD65_857 8dfe2ad8fae0a08afcc800f423f4155c 343 SUPERFAMILY SSF47413 12 70 6.94E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_857 8dfe2ad8fae0a08afcc800f423f4155c 343 Gene3D G3DSA:3.40.50.2300 168 301 5.0E-59 T 14-10-2018 BD65_857 8dfe2ad8fae0a08afcc800f423f4155c 343 Pfam PF13377 Periplasmic binding protein-like domain 179 343 1.1E-27 T 14-10-2018 BD65_857 8dfe2ad8fae0a08afcc800f423f4155c 343 Gene3D G3DSA:3.40.50.2300 74 317 5.0E-59 T 14-10-2018 BD65_1325 3ba479c95588ccbe37931ed37eb22e0f 83 SUPERFAMILY SSF89447 1 68 1.31E-14 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily BD65_1325 3ba479c95588ccbe37931ed37eb22e0f 83 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 49 5.3E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BD65_1325 3ba479c95588ccbe37931ed37eb22e0f 83 Gene3D G3DSA:2.10.260.10 1 83 2.7E-19 T 14-10-2018 BD65_1325 3ba479c95588ccbe37931ed37eb22e0f 83 SMART SM00966 6 51 2.3E-4 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BD65_2854 bf84542b163afec75b2ba46654bbfbdb 392 Gene3D G3DSA:2.40.30.170 54 305 2.2E-114 T 14-10-2018 BD65_2854 bf84542b163afec75b2ba46654bbfbdb 392 Pfam PF00529 HlyD membrane-fusion protein of T1SS 42 362 5.7E-10 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BD65_2854 bf84542b163afec75b2ba46654bbfbdb 392 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 295 3.1E-11 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BD65_2854 bf84542b163afec75b2ba46654bbfbdb 392 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 377 2.2E-82 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BD65_2854 bf84542b163afec75b2ba46654bbfbdb 392 Gene3D G3DSA:1.10.287.470 101 174 2.2E-114 T 14-10-2018 BD65_2854 bf84542b163afec75b2ba46654bbfbdb 392 Gene3D G3DSA:2.40.50.100 66 210 2.2E-114 T 14-10-2018 BD65_2854 bf84542b163afec75b2ba46654bbfbdb 392 Gene3D G3DSA:2.40.420.20 306 375 2.2E-114 T 14-10-2018 BD65_2854 bf84542b163afec75b2ba46654bbfbdb 392 SUPERFAMILY SSF111369 54 302 2.09E-88 T 14-10-2018 BD65_2082 86891af3270efb18c669b16a9e4a46a9 63 Pfam PF10945 Cellulose biosynthesis protein BcsR 17 57 5.0E-22 T 14-10-2018 IPR024487 Protein YhjR BD65_2082 86891af3270efb18c669b16a9e4a46a9 63 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 17 58 9.0E-8 T 14-10-2018 IPR024487 Protein YhjR BD65_911 50da729d268c5f28eb2637fb729d182f 245 Pfam PF01578 Cytochrome C assembly protein 26 184 2.4E-31 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BD65_911 50da729d268c5f28eb2637fb729d182f 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 3.6E-81 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_911 50da729d268c5f28eb2637fb729d182f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 4.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_911 50da729d268c5f28eb2637fb729d182f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 4.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_911 50da729d268c5f28eb2637fb729d182f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 4.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_911 50da729d268c5f28eb2637fb729d182f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 4.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_911 50da729d268c5f28eb2637fb729d182f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 4.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_911 50da729d268c5f28eb2637fb729d182f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 4.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_1401 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1401 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1401 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1401 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1401 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1401 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1401 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 54 2.1E-21 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1401 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1401 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1401 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2449 89c24bb845579510faf51646508b684b 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BD65_2449 89c24bb845579510faf51646508b684b 284 PIRSF PIRSF001359 1 284 2.4E-110 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BD65_2449 89c24bb845579510faf51646508b684b 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 5.6E-162 T 14-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 BD65_2449 89c24bb845579510faf51646508b684b 284 Gene3D G3DSA:3.20.20.70 1 284 2.8E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2449 89c24bb845579510faf51646508b684b 284 SUPERFAMILY SSF51569 1 283 4.69E-102 T 14-10-2018 BD65_2449 89c24bb845579510faf51646508b684b 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 3.1E-100 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BD65_2449 89c24bb845579510faf51646508b684b 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 2.0E-102 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BD65_481 e2e1784d638953470707d0ad6df47442 384 SUPERFAMILY SSF53383 4 376 1.99E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_481 e2e1784d638953470707d0ad6df47442 384 Gene3D G3DSA:3.90.1150.10 253 382 7.8E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_481 e2e1784d638953470707d0ad6df47442 384 Gene3D G3DSA:3.40.640.10 1 252 4.0E-93 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_481 e2e1784d638953470707d0ad6df47442 384 PIRSF PIRSF000390 1 381 2.2E-110 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BD65_481 e2e1784d638953470707d0ad6df47442 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 5.5E-127 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BD65_481 e2e1784d638953470707d0ad6df47442 384 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 70.513 T 14-10-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 Gene3D G3DSA:1.20.1330.10 44 175 2.2E-72 T 14-10-2018 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 SUPERFAMILY SSF64518 1 429 1.44E-96 T 14-10-2018 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 Gene3D G3DSA:2.170.280.10 176 324 2.2E-72 T 14-10-2018 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 4.9E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 Pfam PF00700 Bacterial flagellin C-terminal helical region 344 428 2.6E-30 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 Gene3D G3DSA:1.10.8.410 377 429 3.9E-23 T 14-10-2018 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 PRINTS PR00207 Flagellin signature 110 133 7.2E-30 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 PRINTS PR00207 Flagellin signature 36 53 7.2E-30 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 PRINTS PR00207 Flagellin signature 75 94 7.2E-30 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 Gene3D G3DSA:1.20.58.1830 4 32 2.2E-72 T 14-10-2018 BD65_667 5c2bef4f135edca43bf75e5fd0811db9 429 Gene3D G3DSA:2.30.220.10 190 288 2.2E-72 T 14-10-2018 BD65_624 19147a9c7db032eb4ef34b731a167173 312 TIGRFAM TIGR03814 Gln_ase: glutaminase A 22 309 6.8E-107 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BD65_624 19147a9c7db032eb4ef34b731a167173 312 Hamap MF_00313 Glutaminase [glsA]. 7 309 41.087 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BD65_624 19147a9c7db032eb4ef34b731a167173 312 Pfam PF04960 Glutaminase 25 309 1.0E-99 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BD65_624 19147a9c7db032eb4ef34b731a167173 312 SUPERFAMILY SSF56601 5 309 1.19E-103 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_624 19147a9c7db032eb4ef34b731a167173 312 Gene3D G3DSA:3.40.710.10 3 311 8.4E-110 T 14-10-2018 BD65_2797 382331abb1895e9da9c03fcb134f3a62 200 Gene3D G3DSA:3.40.30.10 1 198 1.0E-71 T 14-10-2018 BD65_2797 382331abb1895e9da9c03fcb134f3a62 200 SUPERFAMILY SSF52833 1 195 8.23E-66 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_2797 382331abb1895e9da9c03fcb134f3a62 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 195 1.3E-10 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BD65_2797 382331abb1895e9da9c03fcb134f3a62 200 PIRSF PIRSF000239 1 199 2.7E-58 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BD65_2797 382331abb1895e9da9c03fcb134f3a62 200 Pfam PF00578 AhpC/TSA family 5 139 1.5E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 21.468 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 Gene3D G3DSA:3.30.1330.10 213 418 9.4E-43 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 Gene3D G3DSA:3.90.650.10 807 981 3.5E-29 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 SUPERFAMILY SSF52317 1036 1294 2.92E-100 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 SUPERFAMILY SSF55326 618 815 2.88E-67 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 7.9E-107 T 14-10-2018 BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 Gene3D G3DSA:1.10.8.750 152 212 1.5E-28 T 14-10-2018 BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 SMART SM01211 1040 1295 2.1E-161 T 14-10-2018 BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1294 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 SUPERFAMILY SSF109736 154 219 6.41E-21 T 14-10-2018 BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 SUPERFAMILY SSF82697 1 151 3.35E-51 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 Gene3D G3DSA:3.30.1330.10 613 806 3.3E-25 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 Gene3D G3DSA:3.90.650.10 419 605 5.3E-58 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 967 3.1E-12 T 14-10-2018 IPR010918 PurM-like, C-terminal domain BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 587 4.4E-27 T 14-10-2018 IPR010918 PurM-like, C-terminal domain BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 Gene3D G3DSA:3.40.50.880 982 1296 1.3E-141 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 SUPERFAMILY SSF56042 430 614 1.36E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 SUPERFAMILY SSF55326 220 427 2.02E-64 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BD65_1070 da63d547c9ec0ddd0d7e860b903b6ed8 1296 SUPERFAMILY SSF56042 822 1034 8.97E-55 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BD65_2586 e916d0b9602b3175175cc57c2c181a72 298 Pfam PF00892 EamA-like transporter family 158 284 6.2E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_2586 e916d0b9602b3175175cc57c2c181a72 298 SUPERFAMILY SSF103481 45 139 1.57E-7 T 14-10-2018 BD65_2586 e916d0b9602b3175175cc57c2c181a72 298 SUPERFAMILY SSF103481 190 290 4.58E-11 T 14-10-2018 BD65_3018 fe2025975fb93797c34d922a8dfb3414 327 SUPERFAMILY SSF56281 24 292 2.98E-18 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_3018 fe2025975fb93797c34d922a8dfb3414 327 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 232 243 6.5E-31 T 14-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 BD65_3018 fe2025975fb93797c34d922a8dfb3414 327 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 278 289 6.5E-31 T 14-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 BD65_3018 fe2025975fb93797c34d922a8dfb3414 327 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 96 114 6.5E-31 T 14-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 BD65_3018 fe2025975fb93797c34d922a8dfb3414 327 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 123 144 6.5E-31 T 14-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 BD65_3018 fe2025975fb93797c34d922a8dfb3414 327 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 251 264 6.5E-31 T 14-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 BD65_3018 fe2025975fb93797c34d922a8dfb3414 327 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 100 114 - T 14-10-2018 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 BD65_3018 fe2025975fb93797c34d922a8dfb3414 327 Pfam PF02112 cAMP phosphodiesterases class-II 23 322 2.7E-54 T 14-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 BD65_3018 fe2025975fb93797c34d922a8dfb3414 327 Gene3D G3DSA:3.60.15.10 30 318 6.6E-16 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_3018 fe2025975fb93797c34d922a8dfb3414 327 PIRSF PIRSF000962 6 327 2.7E-109 T 14-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.681 T 14-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 SUPERFAMILY SSF118215 9 401 4.97E-122 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 Gene3D G3DSA:1.10.3860.10 1 420 3.0E-121 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 4.2E-30 T 14-10-2018 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 4.2E-30 T 14-10-2018 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 4.2E-30 T 14-10-2018 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 4.2E-30 T 14-10-2018 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 4.2E-30 T 14-10-2018 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 4.2E-30 T 14-10-2018 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 4.7E-112 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BD65_2089 41c13ef80a09b23f61777c4edee2baed 430 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BD65_228 c1dacc7c18f67854803fed885ee02a82 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 129 37.088 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BD65_228 c1dacc7c18f67854803fed885ee02a82 137 Gene3D G3DSA:2.170.150.20 4 136 2.4E-58 T 14-10-2018 BD65_228 c1dacc7c18f67854803fed885ee02a82 137 SUPERFAMILY SSF51316 8 131 3.77E-57 T 14-10-2018 IPR011057 Mss4-like superfamily BD65_228 c1dacc7c18f67854803fed885ee02a82 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 11 135 7.5E-59 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BD65_228 c1dacc7c18f67854803fed885ee02a82 137 Pfam PF01641 SelR domain 12 127 1.5E-51 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BD65_384 a24fb421827affed883686dee35841f7 154 SUPERFAMILY SSF55136 11 143 4.45E-11 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BD65_384 a24fb421827affed883686dee35841f7 154 SMART SM00871 1 153 5.8E-17 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding BD65_384 a24fb421827affed883686dee35841f7 154 Pfam PF14526 Integron-associated effector binding protein 12 152 1.5E-17 T 14-10-2018 IPR029441 Integron-associated effector binding protein BD65_384 a24fb421827affed883686dee35841f7 154 Gene3D G3DSA:3.20.80.10 4 152 1.3E-35 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BD65_565 aa4c8039da56257a9e5308fd4abff8c9 153 PIRSF PIRSF020687 1 152 4.1E-69 T 14-10-2018 IPR009328 Protein of unknown function DUF986 BD65_565 aa4c8039da56257a9e5308fd4abff8c9 153 Pfam PF06173 Protein of unknown function (DUF986) 4 150 1.2E-64 T 14-10-2018 IPR009328 Protein of unknown function DUF986 BD65_565 aa4c8039da56257a9e5308fd4abff8c9 153 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 144 1.0E-53 T 14-10-2018 IPR009328 Protein of unknown function DUF986 BD65_565 aa4c8039da56257a9e5308fd4abff8c9 153 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 32.17 T 14-10-2018 IPR009328 Protein of unknown function DUF986 BD65_3046 e971675436c987816b57a94f2c62226b 267 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 267 20.365 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 BD65_3046 e971675436c987816b57a94f2c62226b 267 Gene3D G3DSA:1.20.5.110 35 113 7.3E-33 T 14-10-2018 BD65_3046 e971675436c987816b57a94f2c62226b 267 Pfam PF16331 TolA binding protein trimerisation 37 110 2.0E-24 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 BD65_3046 e971675436c987816b57a94f2c62226b 267 Gene3D G3DSA:1.25.40.10 147 267 2.6E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_3046 e971675436c987816b57a94f2c62226b 267 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 147 264 6.8E-44 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal BD65_3046 e971675436c987816b57a94f2c62226b 267 SUPERFAMILY SSF48452 156 260 5.69E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_3046 e971675436c987816b57a94f2c62226b 267 Pfam PF13174 Tetratricopeptide repeat 222 254 9.6E-8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_3046 e971675436c987816b57a94f2c62226b 267 Pfam PF13432 Tetratricopeptide repeat 154 218 3.0E-10 T 14-10-2018 BD65_1533 3bf08d58e98b329136fa199ef2fae998 182 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 15 179 23.866 T 14-10-2018 IPR006839 Ribosome-associated, YjgA BD65_1533 3bf08d58e98b329136fa199ef2fae998 182 Pfam PF04751 Protein of unknown function (DUF615) 25 175 2.9E-56 T 14-10-2018 IPR006839 Ribosome-associated, YjgA BD65_1533 3bf08d58e98b329136fa199ef2fae998 182 PIRSF PIRSF016183 10 182 2.2E-72 T 14-10-2018 IPR006839 Ribosome-associated, YjgA BD65_1533 3bf08d58e98b329136fa199ef2fae998 182 SUPERFAMILY SSF158710 37 179 3.66E-52 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily BD65_1533 3bf08d58e98b329136fa199ef2fae998 182 Gene3D G3DSA:1.10.60.30 35 109 3.1E-21 T 14-10-2018 BD65_1533 3bf08d58e98b329136fa199ef2fae998 182 Gene3D G3DSA:1.10.60.30 111 182 5.7E-29 T 14-10-2018 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 Pfam PF00361 Proton-conducting membrane transporter 136 428 6.6E-96 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 7.0E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 7.0E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 7.0E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 7.0E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 6.0E-23 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 5.4E-56 T 14-10-2018 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 5.4E-56 T 14-10-2018 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 5.4E-56 T 14-10-2018 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 5.4E-56 T 14-10-2018 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 5.4E-56 T 14-10-2018 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 5.4E-56 T 14-10-2018 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 5.4E-56 T 14-10-2018 BD65_837 5141e3ba6da01db9ec41909aeb4f73e7 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 611 3.2E-232 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_1992 c974c871f8abe96239e9d8d3f6f7af1a 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.902 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BD65_1992 c974c871f8abe96239e9d8d3f6f7af1a 609 Gene3D G3DSA:3.40.50.10490 447 594 1.9E-152 T 14-10-2018 BD65_1992 c974c871f8abe96239e9d8d3f6f7af1a 609 Pfam PF13522 Glutamine amidotransferase domain 65 184 3.1E-21 T 14-10-2018 BD65_1992 c974c871f8abe96239e9d8d3f6f7af1a 609 Pfam PF01380 SIS domain 462 591 2.3E-27 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_1992 c974c871f8abe96239e9d8d3f6f7af1a 609 Pfam PF01380 SIS domain 289 418 4.1E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_1992 c974c871f8abe96239e9d8d3f6f7af1a 609 SUPERFAMILY SSF56235 2 233 3.95E-74 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_1992 c974c871f8abe96239e9d8d3f6f7af1a 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 7.4E-262 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BD65_1992 c974c871f8abe96239e9d8d3f6f7af1a 609 SUPERFAMILY SSF53697 245 609 2.03E-111 T 14-10-2018 BD65_1992 c974c871f8abe96239e9d8d3f6f7af1a 609 Gene3D G3DSA:3.60.20.10 2 241 1.2E-81 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_1992 c974c871f8abe96239e9d8d3f6f7af1a 609 Gene3D G3DSA:3.40.50.10490 249 608 1.9E-152 T 14-10-2018 BD65_1211 7389b47ab9530fe890029ea8b791377e 145 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 2 140 1.5E-70 T 14-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE BD65_1211 7389b47ab9530fe890029ea8b791377e 145 Pfam PF02657 Fe-S metabolism associated domain 19 137 8.6E-37 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like BD65_1211 7389b47ab9530fe890029ea8b791377e 145 Gene3D G3DSA:3.90.1010.10 1 142 2.6E-46 T 14-10-2018 BD65_1211 7389b47ab9530fe890029ea8b791377e 145 SUPERFAMILY SSF82649 3 141 2.17E-43 T 14-10-2018 BD65_507 4dca6caa806ca5565285b2b52eee7247 293 Gene3D G3DSA:1.10.3470.10 41 270 6.2E-9 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_507 4dca6caa806ca5565285b2b52eee7247 293 SUPERFAMILY SSF81345 5 261 4.32E-39 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_507 4dca6caa806ca5565285b2b52eee7247 293 Pfam PF00950 ABC 3 transport family 10 265 3.6E-90 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 BD65_1152 ed81964beb2858f1e2efb300a1541f26 143 PIRSF PIRSF000077 35 139 3.3E-32 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BD65_1152 ed81964beb2858f1e2efb300a1541f26 143 TIGRFAM TIGR01068 thioredoxin: thioredoxin 43 137 1.0E-34 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BD65_1152 ed81964beb2858f1e2efb300a1541f26 143 SUPERFAMILY SSF52833 25 137 3.15E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1152 ed81964beb2858f1e2efb300a1541f26 143 Pfam PF00085 Thioredoxin 37 137 3.2E-27 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 BD65_1152 ed81964beb2858f1e2efb300a1541f26 143 Gene3D G3DSA:3.40.30.10 35 142 8.9E-34 T 14-10-2018 BD65_1152 ed81964beb2858f1e2efb300a1541f26 143 PRINTS PR00421 Thioredoxin family signature 63 72 2.3E-8 T 14-10-2018 BD65_1152 ed81964beb2858f1e2efb300a1541f26 143 PRINTS PR00421 Thioredoxin family signature 55 63 2.3E-8 T 14-10-2018 BD65_1152 ed81964beb2858f1e2efb300a1541f26 143 PRINTS PR00421 Thioredoxin family signature 103 114 2.3E-8 T 14-10-2018 BD65_1152 ed81964beb2858f1e2efb300a1541f26 143 Gene3D G3DSA:2.20.28.140 1 34 2.6E-20 T 14-10-2018 BD65_1152 ed81964beb2858f1e2efb300a1541f26 143 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BD65_3210 1f0d046e1636da45031c092bc0f0ac36 336 SUPERFAMILY SSF51735 1 332 1.62E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_3210 1f0d046e1636da45031c092bc0f0ac36 336 Gene3D G3DSA:3.40.50.720 1 332 9.8E-61 T 14-10-2018 BD65_3210 1f0d046e1636da45031c092bc0f0ac36 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 1.0E-29 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BD65_1839 1b01ce74158ce9b937c5553dadcbea06 342 SUPERFAMILY SSF53822 68 340 9.62E-92 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_1839 1b01ce74158ce9b937c5553dadcbea06 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 4.2E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_1839 1b01ce74158ce9b937c5553dadcbea06 342 SUPERFAMILY SSF47413 8 67 2.91E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_1839 1b01ce74158ce9b937c5553dadcbea06 342 Gene3D G3DSA:1.10.260.40 1 67 1.4E-23 T 14-10-2018 BD65_1839 1b01ce74158ce9b937c5553dadcbea06 342 Gene3D G3DSA:3.40.50.2300 69 314 6.3E-84 T 14-10-2018 BD65_1839 1b01ce74158ce9b937c5553dadcbea06 342 SMART SM00354 9 79 2.5E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_1839 1b01ce74158ce9b937c5553dadcbea06 342 Pfam PF13377 Periplasmic binding protein-like domain 176 337 3.3E-41 T 14-10-2018 BD65_1839 1b01ce74158ce9b937c5553dadcbea06 342 Gene3D G3DSA:3.40.50.2300 168 297 6.3E-84 T 14-10-2018 BD65_1839 1b01ce74158ce9b937c5553dadcbea06 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 14-10-2018 BD65_1275 45ceaff8954b59a95eff29b53b8665c8 959 Pfam PF02347 Glycine cleavage system P-protein 16 440 1.9E-179 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BD65_1275 45ceaff8954b59a95eff29b53b8665c8 959 Pfam PF02347 Glycine cleavage system P-protein 461 739 2.9E-9 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BD65_1275 45ceaff8954b59a95eff29b53b8665c8 959 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 958 25.335 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BD65_1275 45ceaff8954b59a95eff29b53b8665c8 959 SUPERFAMILY SSF53383 17 441 1.51E-94 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_1275 45ceaff8954b59a95eff29b53b8665c8 959 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 952 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BD65_1275 45ceaff8954b59a95eff29b53b8665c8 959 Gene3D G3DSA:3.90.1150.10 767 897 7.0E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1275 45ceaff8954b59a95eff29b53b8665c8 959 SUPERFAMILY SSF53383 462 953 9.0E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_1275 45ceaff8954b59a95eff29b53b8665c8 959 Gene3D G3DSA:3.40.640.10 525 756 2.4E-60 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_1275 45ceaff8954b59a95eff29b53b8665c8 959 Gene3D G3DSA:3.40.640.10 96 355 7.9E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 Gene3D G3DSA:1.10.287.130 657 730 5.8E-14 T 14-10-2018 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 777 884 1.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 22 230 1.4E-96 T 14-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 SUPERFAMILY SSF55874 720 887 1.14E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 SUPERFAMILY SSF47384 660 732 4.51E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 SMART SM00388 664 731 1.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 SUPERFAMILY SSF55781 510 655 5.49E-5 T 14-10-2018 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 Pfam PF13492 GAF domain 538 645 4.9E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 Pfam PF13493 Domain of unknown function (DUF4118) 403 507 2.9E-30 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 Gene3D G3DSA:3.40.50.300 19 229 1.2E-99 T 14-10-2018 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 SUPERFAMILY SSF52402 253 350 1.17E-5 T 14-10-2018 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 SMART SM00387 775 885 6.8E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 Gene3D G3DSA:1.20.120.620 396 502 4.0E-39 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 845 863 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 869 882 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 830 840 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 812 826 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 Gene3D G3DSA:3.30.565.10 733 889 5.9E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 Gene3D G3DSA:3.30.450.40 511 656 3.1E-34 T 14-10-2018 IPR029016 GAF-like domain superfamily BD65_3011 1748cace893cf45038e8b4f33e1c326f 897 Pfam PF00512 His Kinase A (phospho-acceptor) domain 665 731 3.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 SUPERFAMILY SSF102886 5 302 4.45E-140 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 5.8E-134 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 Gene3D G3DSA:3.40.1500.10 1 302 9.3E-138 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 PIRSF PIRSF000166 2 303 6.9E-130 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 56.969 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 PRINTS PR00073 Coprogen oxidase signature 90 114 2.7E-87 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 PRINTS PR00073 Coprogen oxidase signature 162 191 2.7E-87 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 PRINTS PR00073 Coprogen oxidase signature 31 47 2.7E-87 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 PRINTS PR00073 Coprogen oxidase signature 125 147 2.7E-87 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 PRINTS PR00073 Coprogen oxidase signature 48 69 2.7E-87 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 PRINTS PR00073 Coprogen oxidase signature 262 288 2.7E-87 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 PRINTS PR00073 Coprogen oxidase signature 234 261 2.7E-87 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_964 e89674adb9fc773831445ad4a2f574b0 310 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BD65_2348 5f06174a7b2cf11bea0e84e120b8c023 277 SUPERFAMILY SSF51717 6 274 2.88E-105 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_2348 5f06174a7b2cf11bea0e84e120b8c023 277 Pfam PF00809 Pterin binding enzyme 18 257 1.5E-85 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_2348 5f06174a7b2cf11bea0e84e120b8c023 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 8.2E-101 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 BD65_2348 5f06174a7b2cf11bea0e84e120b8c023 277 Gene3D G3DSA:3.20.20.20 1 277 3.7E-111 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_2348 5f06174a7b2cf11bea0e84e120b8c023 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_2348 5f06174a7b2cf11bea0e84e120b8c023 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.457 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 Gene3D G3DSA:3.40.50.1370 135 292 7.9E-123 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.4E-47 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 7.9E-120 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 3.5E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.5E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 3.5E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 3.5E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 4.3E-28 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 Gene3D G3DSA:3.40.50.1370 8 304 7.9E-123 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BD65_1521 0c91993faff4d539351d1c1c915831a7 311 SUPERFAMILY SSF53671 4 306 3.84E-100 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BD65_191 121cc49b7feacc50797254f4ca41ee9d 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.8E-30 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BD65_191 121cc49b7feacc50797254f4ca41ee9d 289 Gene3D G3DSA:1.10.10.10 1 79 1.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_191 121cc49b7feacc50797254f4ca41ee9d 289 Gene3D G3DSA:3.40.50.10490 94 277 7.6E-43 T 14-10-2018 BD65_191 121cc49b7feacc50797254f4ca41ee9d 289 SUPERFAMILY SSF53697 94 277 1.57E-42 T 14-10-2018 BD65_191 121cc49b7feacc50797254f4ca41ee9d 289 Pfam PF01380 SIS domain 124 252 4.5E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_191 121cc49b7feacc50797254f4ca41ee9d 289 SUPERFAMILY SSF46689 1 80 1.97E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 7.9E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 7.9E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 7.9E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 7.9E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 192 1.3E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 SUPERFAMILY SSF56784 5 222 2.23E-57 T 14-10-2018 IPR036412 HAD-like superfamily BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 Gene3D G3DSA:1.10.150.240 22 92 1.9E-62 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 223 36.954 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 192 3.4E-35 T 14-10-2018 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 187 1.5E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 221 3.8E-75 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BD65_2162 65cac35e465f88ed18cb27d911bfa223 232 Gene3D G3DSA:3.40.50.1000 11 215 1.9E-62 T 14-10-2018 IPR023214 HAD superfamily BD65_2144 8032baeed6dd9179339671438d8af6ce 451 SMART SM00387 332 440 2.7E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2144 8032baeed6dd9179339671438d8af6ce 451 Pfam PF00672 HAMP domain 182 225 7.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2144 8032baeed6dd9179339671438d8af6ce 451 SUPERFAMILY SSF55874 293 442 3.41E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2144 8032baeed6dd9179339671438d8af6ce 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 1.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2144 8032baeed6dd9179339671438d8af6ce 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 5.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2144 8032baeed6dd9179339671438d8af6ce 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 5.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2144 8032baeed6dd9179339671438d8af6ce 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 5.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2144 8032baeed6dd9179339671438d8af6ce 451 Gene3D G3DSA:3.30.565.10 295 446 1.1E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2144 8032baeed6dd9179339671438d8af6ce 451 SMART SM00388 233 293 2.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2144 8032baeed6dd9179339671438d8af6ce 451 SUPERFAMILY SSF47384 217 291 7.85E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_2144 8032baeed6dd9179339671438d8af6ce 451 SMART SM00304 180 232 8.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2144 8032baeed6dd9179339671438d8af6ce 451 Gene3D G3DSA:1.10.287.130 178 288 3.5E-22 T 14-10-2018 BD65_2144 8032baeed6dd9179339671438d8af6ce 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 439 1.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_842 dd01467a68b141dac23cba4f24f542eb 908 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 2.7E-203 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 SMART SM00929 88 128 1.2E-18 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 Pfam PF01568 Molydopterin dinucleotide binding domain 826 890 7.4E-6 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.6E-11 T 14-10-2018 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 SUPERFAMILY SSF54292 1 77 9.7E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 Gene3D G3DSA:2.20.25.90 221 274 1.1E-12 T 14-10-2018 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 SUPERFAMILY SSF50692 814 891 1.63E-12 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BD65_842 dd01467a68b141dac23cba4f24f542eb 908 SMART SM00926 221 275 1.9E-9 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 Pfam PF00384 Molybdopterin oxidoreductase 555 637 2.6E-7 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 SUPERFAMILY SSF54862 81 213 1.55E-33 T 14-10-2018 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 Gene3D G3DSA:3.40.50.740 499 686 7.6E-11 T 14-10-2018 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 6.4E-10 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 SUPERFAMILY SSF53706 219 688 1.28E-82 T 14-10-2018 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 Gene3D G3DSA:2.40.40.20 812 903 9.3E-8 T 14-10-2018 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 Gene3D G3DSA:3.10.20.740 1 127 1.9E-28 T 14-10-2018 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 123 1.4E-14 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_842 dd01467a68b141dac23cba4f24f542eb 908 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 Hamap MF_01201 Alanine racemase. 2 356 32.175 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 Pfam PF00842 Alanine racemase, C-terminal domain 233 353 1.1E-38 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 SUPERFAMILY SSF51419 10 233 2.29E-61 T 14-10-2018 IPR029066 PLP-binding barrel BD65_215 a620c41e9afed6953cd46e73ef83794b 357 SMART SM01005 232 356 7.5E-60 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 SUPERFAMILY SSF50621 227 354 1.64E-42 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 TIGRFAM TIGR00492 alr: alanine racemase 5 353 3.1E-117 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 Pfam PF01168 Alanine racemase, N-terminal domain 10 217 1.4E-64 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 Gene3D G3DSA:2.40.37.10 216 351 6.0E-110 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 Gene3D G3DSA:3.20.20.10 11 215 6.0E-110 T 14-10-2018 IPR029066 PLP-binding barrel BD65_215 a620c41e9afed6953cd46e73ef83794b 357 PRINTS PR00992 Alanine racemase signature 61 79 4.7E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 PRINTS PR00992 Alanine racemase signature 248 263 4.7E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 PRINTS PR00992 Alanine racemase signature 286 303 4.7E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 PRINTS PR00992 Alanine racemase signature 27 43 4.7E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 PRINTS PR00992 Alanine racemase signature 155 166 4.7E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 PRINTS PR00992 Alanine racemase signature 338 351 4.7E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 PRINTS PR00992 Alanine racemase signature 190 217 4.7E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 PRINTS PR00992 Alanine racemase signature 121 133 4.7E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_215 a620c41e9afed6953cd46e73ef83794b 357 PRINTS PR00992 Alanine racemase signature 265 280 4.7E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 1.1E-251 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 1.2E-36 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 Pfam PF00682 HMGL-like 4 273 2.7E-104 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 43.334 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 Gene3D G3DSA:3.20.20.70 1 277 3.0E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 SUPERFAMILY SSF110921 391 499 1.15E-25 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 SUPERFAMILY SSF51569 1 291 2.38E-100 T 14-10-2018 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 SMART SM00917 369 500 2.7E-38 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 Gene3D G3DSA:3.30.160.270 393 501 9.6E-12 T 14-10-2018 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 Gene3D G3DSA:1.10.238.260 280 392 9.9E-33 T 14-10-2018 BD65_2540 a2794a0a83559b842b0957ccfa58fe16 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 SUPERFAMILY SSF141868 418 664 1.96E-76 T 14-10-2018 IPR035919 EAL domain superfamily BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 Gene3D G3DSA:1.20.1480.50 145 239 4.2E-6 T 14-10-2018 BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 402 3.2E-11 T 14-10-2018 IPR000160 GGDEF domain BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 Gene3D G3DSA:3.20.20.450 417 666 5.2E-85 T 14-10-2018 IPR035919 EAL domain superfamily BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 Pfam PF00563 EAL domain 419 653 3.8E-63 T 14-10-2018 IPR001633 EAL domain BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 SMART SM00267 232 403 6.6E-19 T 14-10-2018 IPR000160 GGDEF domain BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 SUPERFAMILY SSF55073 249 405 5.26E-22 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 Gene3D G3DSA:3.30.70.270 240 416 2.2E-27 T 14-10-2018 BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 Pfam PF00672 HAMP domain 181 232 1.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 SMART SM00052 413 658 1.6E-98 T 14-10-2018 IPR001633 EAL domain BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 36 156 1.3E-55 T 14-10-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 BD65_2088 8d65911daaa922bd52db33d18f6d52dd 666 Pfam PF00990 Diguanylate cyclase, GGDEF domain 244 398 2.6E-21 T 14-10-2018 IPR000160 GGDEF domain BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 Gene3D G3DSA:3.40.50.2300 1 123 4.2E-20 T 14-10-2018 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 Pfam PF00072 Response regulator receiver domain 6 120 2.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 Gene3D G3DSA:1.10.10.10 124 215 1.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 52.286 T 14-10-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.4E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 SMART SM00448 4 120 1.4E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 SUPERFAMILY SSF46894 144 207 1.6E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 SMART SM00421 148 205 2.3E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 8.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 8.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 8.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_811 7bce0ff187133ecff4b6722fcbfe518d 216 SUPERFAMILY SSF52172 3 136 2.7E-22 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2000 653f46b6bf6068d3211c91874397f3a4 242 Gene3D G3DSA:1.20.58.220 118 233 2.8E-32 T 14-10-2018 IPR038078 PhoU-like domain superfamily BD65_2000 653f46b6bf6068d3211c91874397f3a4 242 Gene3D G3DSA:1.20.58.220 1 117 1.5E-42 T 14-10-2018 IPR038078 PhoU-like domain superfamily BD65_2000 653f46b6bf6068d3211c91874397f3a4 242 PIRSF PIRSF003107 7 226 4.3E-68 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 BD65_2000 653f46b6bf6068d3211c91874397f3a4 242 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 1.8E-73 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 BD65_2000 653f46b6bf6068d3211c91874397f3a4 242 SUPERFAMILY SSF109755 13 228 1.67E-70 T 14-10-2018 BD65_2000 653f46b6bf6068d3211c91874397f3a4 242 Pfam PF01895 PhoU domain 26 111 2.8E-22 T 14-10-2018 IPR026022 PhoU domain BD65_2000 653f46b6bf6068d3211c91874397f3a4 242 Pfam PF01895 PhoU domain 128 212 4.9E-17 T 14-10-2018 IPR026022 PhoU domain BD65_2134 6e8ee94ae39abb0332da26ded5585b35 770 Gene3D G3DSA:3.40.50.300 1 173 8.8E-48 T 14-10-2018 BD65_2134 6e8ee94ae39abb0332da26ded5585b35 770 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 159 1.2E-11 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_2134 6e8ee94ae39abb0332da26ded5585b35 770 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 688 4.8E-226 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 BD65_2134 6e8ee94ae39abb0332da26ded5585b35 770 Pfam PF02421 Ferrous iron transport protein B 5 163 2.7E-64 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 BD65_2134 6e8ee94ae39abb0332da26ded5585b35 770 Pfam PF07670 Nucleoside recognition 354 444 1.1E-12 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BD65_2134 6e8ee94ae39abb0332da26ded5585b35 770 Pfam PF07670 Nucleoside recognition 513 690 4.4E-36 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BD65_2134 6e8ee94ae39abb0332da26ded5585b35 770 SUPERFAMILY SSF52540 4 171 2.41E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2134 6e8ee94ae39abb0332da26ded5585b35 770 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 1.0E-22 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 SUPERFAMILY SSF55190 2 96 2.22E-21 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 Gene3D G3DSA:3.30.1360.70 1 106 7.0E-34 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 Pfam PF05746 DALR anticodon binding domain 460 577 3.0E-33 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 SUPERFAMILY SSF52374 108 451 2.0E-95 T 14-10-2018 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 Gene3D G3DSA:1.10.730.10 454 577 5.5E-32 T 14-10-2018 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.261 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 Pfam PF00750 tRNA synthetases class I (R) 105 446 1.2E-166 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 SMART SM01016 5 87 2.6E-26 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 1.1E-203 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 SMART SM00836 460 577 2.8E-35 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 9.7E-21 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 SUPERFAMILY SSF47323 454 577 3.53E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.3E-26 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 3.3E-26 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.3E-26 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.3E-26 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_171 6bc42eb76a443c6018b6efc7542a993d 577 Gene3D G3DSA:3.40.50.620 108 453 3.9E-109 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_3131 2469a33025878c9e22b6d5bea06f16ca 531 Pfam PF12848 ABC transporter 224 309 4.2E-20 T 14-10-2018 IPR032781 ABC-transporter extension domain BD65_3131 2469a33025878c9e22b6d5bea06f16ca 531 SUPERFAMILY SSF52540 6 237 3.76E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3131 2469a33025878c9e22b6d5bea06f16ca 531 Gene3D G3DSA:3.40.50.300 282 530 7.8E-57 T 14-10-2018 BD65_3131 2469a33025878c9e22b6d5bea06f16ca 531 SUPERFAMILY SSF52540 298 523 2.95E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3131 2469a33025878c9e22b6d5bea06f16ca 531 Pfam PF00005 ABC transporter 336 467 1.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3131 2469a33025878c9e22b6d5bea06f16ca 531 SMART SM00382 26 228 4.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3131 2469a33025878c9e22b6d5bea06f16ca 531 SMART SM00382 344 512 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3131 2469a33025878c9e22b6d5bea06f16ca 531 Pfam PF00005 ABC transporter 18 184 1.2E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3131 2469a33025878c9e22b6d5bea06f16ca 531 Gene3D G3DSA:3.40.50.300 2 279 2.7E-55 T 14-10-2018 BD65_1385 2ce4b804119af0c5a6d450bc4e1dc46b 212 Gene3D G3DSA:3.90.79.10 3 209 7.6E-66 T 14-10-2018 BD65_1385 2ce4b804119af0c5a6d450bc4e1dc46b 212 SUPERFAMILY SSF55811 10 207 1.07E-50 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_1385 2ce4b804119af0c5a6d450bc4e1dc46b 212 Pfam PF00293 NUDIX domain 59 179 1.3E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_1385 2ce4b804119af0c5a6d450bc4e1dc46b 212 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 199 3.0E-76 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 BD65_1385 2ce4b804119af0c5a6d450bc4e1dc46b 212 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 421 440 1.2E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 161 181 1.2E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 193 207 1.2E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 225 239 1.2E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 259 286 1.2E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 Gene3D G3DSA:3.40.50.300 115 292 2.2E-51 T 14-10-2018 BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 SUPERFAMILY SSF48295 359 462 3.4E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 Pfam PF11638 DnaA N-terminal domain 4 64 2.7E-20 T 14-10-2018 IPR024633 DnaA N-terminal domain BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 Gene3D G3DSA:3.30.300.180 2 107 3.6E-40 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 SMART SM00760 371 440 6.1E-45 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 SMART SM00382 160 362 6.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 Gene3D G3DSA:1.10.8.60 294 364 1.1E-23 T 14-10-2018 BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 SUPERFAMILY SSF52540 128 339 7.92E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 ProSitePatterns PS01008 DnaA protein signature. 421 440 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 461 1.4E-185 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 Gene3D G3DSA:1.10.1750.10 370 463 7.3E-40 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 Pfam PF00308 Bacterial dnaA protein 129 345 5.8E-99 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 372 440 1.0E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BD65_2017 674b14ecb229f709c493fdf5d6b00653 463 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 462 34.446 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BD65_133 713025ee91298b0699c9004a48f30c04 259 Pfam PF01300 Telomere recombination 22 185 1.6E-9 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 BD65_133 713025ee91298b0699c9004a48f30c04 259 Gene3D G3DSA:3.90.870.10 1 259 8.3E-104 T 14-10-2018 BD65_133 713025ee91298b0699c9004a48f30c04 259 SUPERFAMILY SSF55821 5 192 9.77E-20 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BD65_3054 aac1ff99d39a070fc172b1e19b554f6b 250 PIRSF PIRSF000709 3 116 3.4E-9 T 14-10-2018 BD65_3054 aac1ff99d39a070fc172b1e19b554f6b 250 PIRSF PIRSF000709 170 241 0.061 T 14-10-2018 BD65_3054 aac1ff99d39a070fc172b1e19b554f6b 250 Gene3D G3DSA:3.40.50.1240 2 250 4.1E-93 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BD65_3054 aac1ff99d39a070fc172b1e19b554f6b 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.585 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 BD65_3054 aac1ff99d39a070fc172b1e19b554f6b 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 131 226 6.4E-5 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BD65_3054 aac1ff99d39a070fc172b1e19b554f6b 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 3.1E-30 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BD65_3054 aac1ff99d39a070fc172b1e19b554f6b 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 BD65_3054 aac1ff99d39a070fc172b1e19b554f6b 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 3.8E-127 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 BD65_3054 aac1ff99d39a070fc172b1e19b554f6b 250 SUPERFAMILY SSF53254 4 247 4.08E-78 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BD65_3054 aac1ff99d39a070fc172b1e19b554f6b 250 SMART SM00855 5 191 1.6E-27 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BD65_2337 2dce2d7ff7e092f2979421363336fc2f 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 3.5E-39 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2337 2dce2d7ff7e092f2979421363336fc2f 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.961 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2337 2dce2d7ff7e092f2979421363336fc2f 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.6E-44 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2337 2dce2d7ff7e092f2979421363336fc2f 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2337 2dce2d7ff7e092f2979421363336fc2f 103 SUPERFAMILY SSF141091 1 102 2.35E-38 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_3074 adbbdb96ba6eba131fb79b7bfe8616ab 243 SUPERFAMILY SSF52540 2 235 8.67E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3074 adbbdb96ba6eba131fb79b7bfe8616ab 243 Gene3D G3DSA:3.40.50.300 1 241 2.5E-44 T 14-10-2018 BD65_3074 adbbdb96ba6eba131fb79b7bfe8616ab 243 Pfam PF00005 ABC transporter 19 171 1.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3074 adbbdb96ba6eba131fb79b7bfe8616ab 243 SMART SM00382 26 229 4.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1598 2913a17362492bfadb773cda8a3b681b 561 Pfam PF08479 POTRA domain, ShlB-type 80 153 4.5E-20 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type BD65_1598 2913a17362492bfadb773cda8a3b681b 561 PIRSF PIRSF029745 1 561 2.6E-127 T 14-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 BD65_1598 2913a17362492bfadb773cda8a3b681b 561 Gene3D G3DSA:2.40.160.50 182 554 5.5E-73 T 14-10-2018 BD65_1598 2913a17362492bfadb773cda8a3b681b 561 Gene3D G3DSA:3.10.20.310 81 156 1.6E-10 T 14-10-2018 BD65_1598 2913a17362492bfadb773cda8a3b681b 561 Pfam PF17287 POTRA domain 155 205 1.3E-14 T 14-10-2018 IPR035251 ShlB, POTRA domain BD65_1598 2913a17362492bfadb773cda8a3b681b 561 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 210 523 1.1E-98 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 SUPERFAMILY SSF101801 249 322 1.22E-12 T 14-10-2018 IPR036429 SpoA-like superfamily BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 320 1.3E-16 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 320 3.5E-111 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 Pfam PF02154 Flagellar motor switch protein FliM 37 230 9.4E-76 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 SUPERFAMILY SSF103039 48 230 2.14E-20 T 14-10-2018 IPR028976 CheC-like superfamily BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 Gene3D G3DSA:3.40.1550.10 43 232 3.2E-56 T 14-10-2018 IPR028976 CheC-like superfamily BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 3.4E-31 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 3.4E-31 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 3.4E-31 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 3.4E-31 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BD65_683 b9eed7c78d9c58fc6fb229726de13dfe 334 PIRSF PIRSF002888 2 330 2.5E-95 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BD65_1507 fc22126c108b209785fde6f7a154a6c2 260 Pfam PF02405 Permease MlaE 45 256 1.5E-75 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 BD65_1507 fc22126c108b209785fde6f7a154a6c2 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 2.3E-103 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BD65_3094 4b9f72cbf2f92ce878b9677351f74f76 309 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 50.538 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 BD65_3094 4b9f72cbf2f92ce878b9677351f74f76 309 Pfam PF01207 Dihydrouridine synthase (Dus) 5 297 9.0E-89 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BD65_3094 4b9f72cbf2f92ce878b9677351f74f76 309 PIRSF PIRSF006621 1 309 2.2E-82 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BD65_3094 4b9f72cbf2f92ce878b9677351f74f76 309 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BD65_3094 4b9f72cbf2f92ce878b9677351f74f76 309 Gene3D G3DSA:1.20.225.30 243 309 3.8E-33 T 14-10-2018 BD65_3094 4b9f72cbf2f92ce878b9677351f74f76 309 SUPERFAMILY SSF51395 1 304 3.78E-71 T 14-10-2018 BD65_3094 4b9f72cbf2f92ce878b9677351f74f76 309 Gene3D G3DSA:3.20.20.70 1 242 4.4E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_922 f29f70c85bf5231a3ae2a5e726e2156b 558 SUPERFAMILY SSF55781 226 345 7.01E-6 T 14-10-2018 BD65_922 f29f70c85bf5231a3ae2a5e726e2156b 558 Pfam PF06580 Histidine kinase 359 437 7.5E-25 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BD65_922 f29f70c85bf5231a3ae2a5e726e2156b 558 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 549 5.8E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_922 f29f70c85bf5231a3ae2a5e726e2156b 558 SUPERFAMILY SSF55874 413 548 1.83E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_922 f29f70c85bf5231a3ae2a5e726e2156b 558 Pfam PF07694 5TMR of 5TMR-LYT 28 193 5.6E-45 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 BD65_922 f29f70c85bf5231a3ae2a5e726e2156b 558 Gene3D G3DSA:3.30.565.10 411 554 3.7E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_922 f29f70c85bf5231a3ae2a5e726e2156b 558 SMART SM00387 451 553 1.1E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_922 f29f70c85bf5231a3ae2a5e726e2156b 558 Gene3D G3DSA:1.10.1760.20 44 204 4.8E-10 T 14-10-2018 BD65_2052 0d9a881fce03cc9a028ce1ed434d12b1 321 SUPERFAMILY SSF54862 28 273 9.94E-72 T 14-10-2018 BD65_2052 0d9a881fce03cc9a028ce1ed434d12b1 321 Pfam PF13247 4Fe-4S dicluster domain 92 188 3.1E-25 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BD65_2052 0d9a881fce03cc9a028ce1ed434d12b1 321 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_2052 0d9a881fce03cc9a028ce1ed434d12b1 321 PIRSF PIRSF036298 1 306 1.4E-166 T 14-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 BD65_2052 0d9a881fce03cc9a028ce1ed434d12b1 321 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 8.8E-23 T 14-10-2018 IPR015246 Formate dehydrogenase, transmembrane BD65_2052 0d9a881fce03cc9a028ce1ed434d12b1 321 Gene3D G3DSA:1.20.5.480 247 295 3.8E-27 T 14-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily BD65_2052 0d9a881fce03cc9a028ce1ed434d12b1 321 Gene3D G3DSA:3.30.70.20 28 227 3.7E-103 T 14-10-2018 BD65_2052 0d9a881fce03cc9a028ce1ed434d12b1 321 Gene3D G3DSA:3.30.70.20 18 162 3.7E-103 T 14-10-2018 BD65_2052 0d9a881fce03cc9a028ce1ed434d12b1 321 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 5.3E-144 T 14-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 BD65_1389 5c11d16b484897caa95829d61c3f3052 260 SUPERFAMILY SSF53213 5 259 1.7E-89 T 14-10-2018 BD65_1389 5c11d16b484897caa95829d61c3f3052 260 PIRSF PIRSF006157 1 260 2.2E-91 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 BD65_1389 5c11d16b484897caa95829d61c3f3052 260 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 258 2.8E-31 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 BD65_1389 5c11d16b484897caa95829d61c3f3052 260 Gene3D G3DSA:3.40.830.10 1 260 1.3E-91 T 14-10-2018 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 Pfam PF00258 Flavodoxin 65 187 3.3E-30 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 Gene3D G3DSA:3.40.50.360 54 218 1.1E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 Pfam PF00175 Oxidoreductase NAD-binding domain 458 565 6.7E-20 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 SUPERFAMILY SSF52343 445 600 1.28E-50 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 Gene3D G3DSA:2.40.30.10 234 440 2.1E-74 T 14-10-2018 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 Gene3D G3DSA:1.20.990.10 281 385 2.1E-74 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 Gene3D G3DSA:3.40.50.80 446 600 8.9E-59 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 SUPERFAMILY SSF52218 62 209 1.09E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 495 506 5.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 457 476 5.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 557 5.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 526 542 5.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 420 429 5.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 387 394 5.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 271 281 5.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 482 491 5.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 600 1.3E-269 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00369 Flavodoxin signature 144 154 1.5E-13 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00369 Flavodoxin signature 168 187 1.5E-13 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00369 Flavodoxin signature 64 77 1.5E-13 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PRINTS PR00369 Flavodoxin signature 112 123 1.5E-13 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 600 51.706 T 14-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 PIRSF PIRSF000207 1 600 4.1E-274 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 SUPERFAMILY SSF63380 229 447 5.67E-64 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BD65_2623 824c3b4f1ed2862064875723d791d0ab 600 Pfam PF00667 FAD binding domain 231 425 8.2E-26 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 Gene3D G3DSA:1.10.287.180 1 75 1.3E-32 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 SUPERFAMILY SSF46557 3 78 7.72E-29 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 PIRSF PIRSF006092 1 158 4.7E-55 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 SUPERFAMILY SSF54534 81 157 3.79E-24 T 14-10-2018 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 2.9E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 Gene3D G3DSA:3.10.50.30 76 158 1.8E-32 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.951 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 2.0E-31 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BD65_2344 27c3745e91c10eec4da70e0f59c448bb 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 9.1E-60 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 BD65_2009 5a225bf38fc83fc4bc9bef368858ef5c 308 Gene3D G3DSA:2.60.40.3310 32 184 5.7E-11 T 14-10-2018 BD65_2009 5a225bf38fc83fc4bc9bef368858ef5c 308 Gene3D G3DSA:2.60.40.1090 185 307 1.3E-24 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 BD65_2009 5a225bf38fc83fc4bc9bef368858ef5c 308 Pfam PF00419 Fimbrial protein 176 308 3.9E-12 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 BD65_2009 5a225bf38fc83fc4bc9bef368858ef5c 308 SUPERFAMILY SSF49401 183 308 2.98E-20 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_2246 c8ff98650042aad0d34484446fcf0919 273 Gene3D G3DSA:3.40.50.720 103 245 3.1E-84 T 14-10-2018 BD65_2246 c8ff98650042aad0d34484446fcf0919 273 Gene3D G3DSA:3.40.50.10860 6 255 3.1E-84 T 14-10-2018 BD65_2246 c8ff98650042aad0d34484446fcf0919 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 5.4E-24 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BD65_2246 c8ff98650042aad0d34484446fcf0919 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 268 31.979 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BD65_2246 c8ff98650042aad0d34484446fcf0919 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 191 4.9E-11 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BD65_2246 c8ff98650042aad0d34484446fcf0919 273 SUPERFAMILY SSF53223 5 102 5.07E-30 T 14-10-2018 BD65_2246 c8ff98650042aad0d34484446fcf0919 273 SUPERFAMILY SSF51735 103 264 1.16E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2246 c8ff98650042aad0d34484446fcf0919 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 271 3.5E-96 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BD65_1091 7688050a67ac72d954586bd222004c6b 437 SMART SM00487 23 225 2.4E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_1091 7688050a67ac72d954586bd222004c6b 437 Gene3D G3DSA:3.40.50.300 1 212 1.9E-71 T 14-10-2018 BD65_1091 7688050a67ac72d954586bd222004c6b 437 Pfam PF00270 DEAD/DEAH box helicase 28 196 1.0E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_1091 7688050a67ac72d954586bd222004c6b 437 Gene3D G3DSA:3.40.50.300 219 388 4.5E-48 T 14-10-2018 BD65_1091 7688050a67ac72d954586bd222004c6b 437 SUPERFAMILY SSF52540 35 354 2.53E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1091 7688050a67ac72d954586bd222004c6b 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BD65_1091 7688050a67ac72d954586bd222004c6b 437 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 49.52 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 BD65_1091 7688050a67ac72d954586bd222004c6b 437 Pfam PF00271 Helicase conserved C-terminal domain 236 343 9.4E-26 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1091 7688050a67ac72d954586bd222004c6b 437 SMART SM00490 262 343 2.7E-27 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1046 86578263f67fae3cbe367ae04a842347 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BD65_1046 86578263f67fae3cbe367ae04a842347 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 8.0E-58 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 BD65_1046 86578263f67fae3cbe367ae04a842347 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 38.597 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 BD65_1046 86578263f67fae3cbe367ae04a842347 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.2E-36 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BD65_1046 86578263f67fae3cbe367ae04a842347 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.9E-25 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BD65_1046 86578263f67fae3cbe367ae04a842347 107 Gene3D G3DSA:2.60.300.12 2 107 1.5E-36 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BD65_1046 86578263f67fae3cbe367ae04a842347 107 SUPERFAMILY SSF89360 1 95 4.58E-33 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BD65_8 97f748b2c7e945e8090adada602eb5a0 550 Pfam PF02470 MlaD protein 292 393 1.1E-12 T 14-10-2018 IPR003399 Mce/MlaD BD65_8 97f748b2c7e945e8090adada602eb5a0 550 Pfam PF02470 MlaD protein 162 220 6.1E-7 T 14-10-2018 IPR003399 Mce/MlaD BD65_8 97f748b2c7e945e8090adada602eb5a0 550 Pfam PF02470 MlaD protein 45 136 8.1E-12 T 14-10-2018 IPR003399 Mce/MlaD BD65_3242 c6cf80a5c696f073a8f9b40c6585c9e7 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 427 35.454 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BD65_3242 c6cf80a5c696f073a8f9b40c6585c9e7 428 PIRSF PIRSF000505 2 427 7.1E-155 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BD65_3242 c6cf80a5c696f073a8f9b40c6585c9e7 428 Gene3D G3DSA:3.65.10.10 242 421 3.8E-159 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BD65_3242 c6cf80a5c696f073a8f9b40c6585c9e7 428 Gene3D G3DSA:3.65.10.10 21 224 3.8E-159 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BD65_3242 c6cf80a5c696f073a8f9b40c6585c9e7 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 424 5.0E-143 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BD65_3242 c6cf80a5c696f073a8f9b40c6585c9e7 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BD65_3242 c6cf80a5c696f073a8f9b40c6585c9e7 428 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BD65_3242 c6cf80a5c696f073a8f9b40c6585c9e7 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 421 2.3E-151 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BD65_3242 c6cf80a5c696f073a8f9b40c6585c9e7 428 SUPERFAMILY SSF55205 5 424 2.09E-144 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BD65_976 cc51cd078ebb75d59d6a8e654cb63c05 185 PIRSF PIRSF026640 2 178 5.9E-51 T 14-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_976 cc51cd078ebb75d59d6a8e654cb63c05 185 SMART SM00830 22 98 1.8E-11 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_976 cc51cd078ebb75d59d6a8e654cb63c05 185 Pfam PF01817 Chorismate mutase type II 30 96 3.2E-10 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_976 cc51cd078ebb75d59d6a8e654cb63c05 185 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 28 133 8.2E-37 T 14-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_976 cc51cd078ebb75d59d6a8e654cb63c05 185 Gene3D G3DSA:1.20.140.170 25 178 1.4E-56 T 14-10-2018 BD65_976 cc51cd078ebb75d59d6a8e654cb63c05 185 SUPERFAMILY SSF48600 28 176 9.92E-34 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_2302 d68cd01805f792156a0bf1196c8f1614 248 Gene3D G3DSA:3.30.1330.30 1 75 1.7E-28 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like BD65_2302 d68cd01805f792156a0bf1196c8f1614 248 SUPERFAMILY SSF75217 68 243 5.3E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BD65_2302 d68cd01805f792156a0bf1196c8f1614 248 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 43.925 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BD65_2302 d68cd01805f792156a0bf1196c8f1614 248 Gene3D G3DSA:3.40.1280.10 77 243 8.7E-66 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BD65_2302 d68cd01805f792156a0bf1196c8f1614 248 Pfam PF00588 SpoU rRNA Methylase family 96 236 2.3E-39 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BD65_2302 d68cd01805f792156a0bf1196c8f1614 248 SUPERFAMILY SSF55315 2 75 9.53E-20 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like BD65_2302 d68cd01805f792156a0bf1196c8f1614 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 76 5.3E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BD65_2302 d68cd01805f792156a0bf1196c8f1614 248 SMART SM00967 4 80 2.9E-21 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BD65_2302 d68cd01805f792156a0bf1196c8f1614 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 3.4E-88 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 Gene3D G3DSA:3.40.50.300 1 169 2.7E-51 T 14-10-2018 BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 25.195 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 PRINTS PR01100 Shikimate kinase family signature 95 112 2.4E-22 T 14-10-2018 BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 PRINTS PR01100 Shikimate kinase family signature 29 42 2.4E-22 T 14-10-2018 BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 PRINTS PR01100 Shikimate kinase family signature 5 20 2.4E-22 T 14-10-2018 BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 PRINTS PR01100 Shikimate kinase family signature 57 65 2.4E-22 T 14-10-2018 BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 PRINTS PR01100 Shikimate kinase family signature 74 83 2.4E-22 T 14-10-2018 BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 42.396 T 14-10-2018 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 SUPERFAMILY SSF52540 3 168 1.36E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 Pfam PF01202 Shikimate kinase 11 166 1.1E-44 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BD65_2780 e5bba81d8841d2dafddd38ed76d77e71 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BD65_490 bab6fcba33d4bb6df7d97fde81b81211 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BD65_490 bab6fcba33d4bb6df7d97fde81b81211 98 Gene3D G3DSA:4.10.520.10 1 98 4.2E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BD65_490 bab6fcba33d4bb6df7d97fde81b81211 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 5.7E-54 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 BD65_490 bab6fcba33d4bb6df7d97fde81b81211 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.086 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 BD65_490 bab6fcba33d4bb6df7d97fde81b81211 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.9E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_490 bab6fcba33d4bb6df7d97fde81b81211 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_490 bab6fcba33d4bb6df7d97fde81b81211 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_490 bab6fcba33d4bb6df7d97fde81b81211 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_490 bab6fcba33d4bb6df7d97fde81b81211 98 SUPERFAMILY SSF47729 3 93 1.62E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BD65_490 bab6fcba33d4bb6df7d97fde81b81211 98 SMART SM00411 3 92 2.2E-42 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_2545 a3723b223a527c249872cb927a3daed9 334 Gene3D G3DSA:1.10.260.40 1 61 1.7E-28 T 14-10-2018 BD65_2545 a3723b223a527c249872cb927a3daed9 334 Gene3D G3DSA:3.40.50.2300 155 333 3.7E-27 T 14-10-2018 BD65_2545 a3723b223a527c249872cb927a3daed9 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.9E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_2545 a3723b223a527c249872cb927a3daed9 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 304 1.9E-13 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain BD65_2545 a3723b223a527c249872cb927a3daed9 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.0E-148 T 14-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 BD65_2545 a3723b223a527c249872cb927a3daed9 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 14-10-2018 BD65_2545 a3723b223a527c249872cb927a3daed9 334 SMART SM00354 1 73 7.4E-32 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_2545 a3723b223a527c249872cb927a3daed9 334 Gene3D G3DSA:3.40.50.2300 62 154 2.0E-25 T 14-10-2018 BD65_2545 a3723b223a527c249872cb927a3daed9 334 SUPERFAMILY SSF53822 60 314 6.09E-40 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_2545 a3723b223a527c249872cb927a3daed9 334 SUPERFAMILY SSF47413 2 58 8.7E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_899 4cfa8d1d082616235729f1f9c8235bd0 160 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 3.5E-46 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 BD65_899 4cfa8d1d082616235729f1f9c8235bd0 160 Gene3D G3DSA:3.40.50.1240 1 160 9.3E-38 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BD65_899 4cfa8d1d082616235729f1f9c8235bd0 160 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 70 5.9E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BD65_899 4cfa8d1d082616235729f1f9c8235bd0 160 SUPERFAMILY SSF53254 2 139 1.2E-15 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 Gene3D G3DSA:2.40.10.10 52 159 9.0E-29 T 14-10-2018 BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 SUPERFAMILY SSF50494 23 268 1.55E-31 T 14-10-2018 IPR009003 Peptidase S1, PA clan BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 SMART SM00020 44 265 0.0036 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 PRINTS PR00839 V8 serine protease family signature 42 59 1.7E-19 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 PRINTS PR00839 V8 serine protease family signature 230 242 1.7E-19 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 PRINTS PR00839 V8 serine protease family signature 210 226 1.7E-19 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 PRINTS PR00839 V8 serine protease family signature 67 84 1.7E-19 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 PRINTS PR00839 V8 serine protease family signature 176 189 1.7E-19 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 Pfam PF00089 Trypsin 48 242 2.8E-14 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 78 83 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 Gene3D G3DSA:2.40.10.10 37 240 9.0E-29 T 14-10-2018 BD65_378 078d54848cea35a2d4c28d5c8828d3f6 275 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site BD65_3112 2880edc3585692b8d81bf7c53bfeba7b 444 Pfam PF13520 Amino acid permease 10 401 1.7E-48 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_3112 2880edc3585692b8d81bf7c53bfeba7b 444 Gene3D G3DSA:1.20.1740.10 2 438 7.3E-75 T 14-10-2018 BD65_3112 2880edc3585692b8d81bf7c53bfeba7b 444 PIRSF PIRSF006060 1 432 3.3E-64 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 SMART SM00646 244 403 9.2E-70 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 Gene3D G3DSA:3.10.350.10 521 578 9.5E-17 T 14-10-2018 IPR036779 LysM domain superfamily BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 Gene3D G3DSA:3.10.350.10 446 513 2.3E-14 T 14-10-2018 IPR036779 LysM domain superfamily BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 Pfam PF01476 LysM domain 534 576 2.2E-13 T 14-10-2018 IPR018392 LysM domain BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 Pfam PF01476 LysM domain 463 505 1.4E-11 T 14-10-2018 IPR018392 LysM domain BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 SUPERFAMILY SSF54106 461 505 2.62E-10 T 14-10-2018 BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 SUPERFAMILY SSF54106 533 576 9.42E-11 T 14-10-2018 BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 184 403 1.3E-46 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 SUPERFAMILY SSF53187 182 406 7.53E-51 T 14-10-2018 BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 Pfam PF11741 AMIN domain 21 111 6.4E-9 T 14-10-2018 IPR021731 AMIN domain BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 SMART SM00257 462 505 1.4E-12 T 14-10-2018 IPR018392 LysM domain BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 SMART SM00257 533 576 2.5E-16 T 14-10-2018 IPR018392 LysM domain BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 Gene3D G3DSA:3.40.630.40 171 413 1.8E-68 T 14-10-2018 BD65_2291 8405b9b77947c7c2418168bb1ab06f01 578 Gene3D G3DSA:2.60.40.3500 10 120 2.0E-15 T 14-10-2018 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 SUPERFAMILY SSF58104 232 518 9.29E-75 T 14-10-2018 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 480 2.6E-55 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 Pfam PF02203 Tar ligand binding domain homologue 1 168 2.9E-51 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 Gene3D G3DSA:1.10.287.950 212 514 1.1E-91 T 14-10-2018 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 SMART SM00319 44 178 3.6E-34 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 SUPERFAMILY SSF47170 38 175 1.57E-41 T 14-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 14-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 Gene3D G3DSA:1.20.120.30 22 189 1.1E-44 T 14-10-2018 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 Pfam PF00672 HAMP domain 215 259 3.7E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 SMART SM00283 265 512 2.8E-97 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 8.3E-81 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 8.3E-81 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 8.3E-81 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 8.3E-81 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 8.3E-81 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 8.3E-81 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 8.3E-81 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_712 ae6d75ac01ee8f42484999d8f95f7c9a 537 SMART SM00304 212 264 1.7E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2283 007561a094b213c3f5fa72a7b1671f34 349 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 72 333 3.9E-92 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BD65_2283 007561a094b213c3f5fa72a7b1671f34 349 SUPERFAMILY SSF52540 112 339 9.94E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2283 007561a094b213c3f5fa72a7b1671f34 349 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 39 339 37.138 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BD65_2283 007561a094b213c3f5fa72a7b1671f34 349 Gene3D G3DSA:3.40.50.300 101 274 6.0E-47 T 14-10-2018 BD65_2283 007561a094b213c3f5fa72a7b1671f34 349 Pfam PF03193 RsgA GTPase 98 275 1.0E-54 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 BD65_2283 007561a094b213c3f5fa72a7b1671f34 349 Gene3D G3DSA:2.40.50.140 34 100 6.0E-26 T 14-10-2018 BD65_2283 007561a094b213c3f5fa72a7b1671f34 349 Gene3D G3DSA:1.10.40.50 275 349 1.9E-27 T 14-10-2018 BD65_2378 7ac2a269664946571f704cfdec7b899b 238 Gene3D G3DSA:3.40.50.300 2 230 1.6E-46 T 14-10-2018 BD65_2378 7ac2a269664946571f704cfdec7b899b 238 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 5 222 4.9E-109 T 14-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_2378 7ac2a269664946571f704cfdec7b899b 238 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2378 7ac2a269664946571f704cfdec7b899b 238 SUPERFAMILY SSF52540 4 227 3.06E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2378 7ac2a269664946571f704cfdec7b899b 238 Pfam PF00005 ABC transporter 27 181 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2378 7ac2a269664946571f704cfdec7b899b 238 SMART SM00382 36 231 3.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2897 96b466238c399fdfb85d413eb7a167ca 284 Pfam PF00085 Thioredoxin 6 107 4.1E-19 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 BD65_2897 96b466238c399fdfb85d413eb7a167ca 284 Pfam PF14561 Tetratricopeptide repeat 195 284 5.0E-29 T 14-10-2018 BD65_2897 96b466238c399fdfb85d413eb7a167ca 284 SUPERFAMILY SSF52833 3 113 1.21E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_2897 96b466238c399fdfb85d413eb7a167ca 284 Gene3D G3DSA:1.25.40.10 112 196 4.2E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2897 96b466238c399fdfb85d413eb7a167ca 284 SUPERFAMILY SSF48452 122 240 1.7E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2897 96b466238c399fdfb85d413eb7a167ca 284 Pfam PF14559 Tetratricopeptide repeat 124 190 2.7E-19 T 14-10-2018 BD65_2897 96b466238c399fdfb85d413eb7a167ca 284 Gene3D G3DSA:3.40.30.10 2 111 1.9E-28 T 14-10-2018 BD65_2897 96b466238c399fdfb85d413eb7a167ca 284 Gene3D G3DSA:1.25.40.10 197 284 1.4E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2435 66a1ff252281f5c27a778426b5cf5c42 258 Pfam PF08220 DeoR-like helix-turn-helix domain 7 58 1.1E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BD65_2435 66a1ff252281f5c27a778426b5cf5c42 258 SMART SM00420 7 59 2.3E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BD65_2435 66a1ff252281f5c27a778426b5cf5c42 258 SUPERFAMILY SSF46785 6 59 1.55E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2435 66a1ff252281f5c27a778426b5cf5c42 258 SMART SM01134 74 235 3.7E-67 T 14-10-2018 BD65_2435 66a1ff252281f5c27a778426b5cf5c42 258 Gene3D G3DSA:1.10.10.10 2 58 1.2E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2435 66a1ff252281f5c27a778426b5cf5c42 258 Pfam PF00455 DeoR C terminal sensor domain 77 234 9.4E-52 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain BD65_2435 66a1ff252281f5c27a778426b5cf5c42 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 2.2E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BD65_2435 66a1ff252281f5c27a778426b5cf5c42 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 2.2E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BD65_2435 66a1ff252281f5c27a778426b5cf5c42 258 SUPERFAMILY SSF100950 76 237 2.26E-31 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BD65_1944 f71d0a579ecbb16d8fa2565ef36e4355 563 Pfam PF05170 AsmA family 255 546 3.4E-8 T 14-10-2018 IPR007844 AsmA BD65_1095 d179eb3de41316d0a8c44de122dc7834 227 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 39.931 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BD65_1095 d179eb3de41316d0a8c44de122dc7834 227 SMART SM00987 49 210 2.1E-41 T 14-10-2018 BD65_1095 d179eb3de41316d0a8c44de122dc7834 227 SUPERFAMILY SSF52141 4 221 6.76E-95 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BD65_1095 d179eb3de41316d0a8c44de122dc7834 227 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 1.2E-86 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BD65_1095 d179eb3de41316d0a8c44de122dc7834 227 Gene3D G3DSA:3.40.470.10 1 226 1.3E-104 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BD65_1095 d179eb3de41316d0a8c44de122dc7834 227 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 1.1E-24 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BD65_1095 d179eb3de41316d0a8c44de122dc7834 227 SMART SM00986 49 210 2.1E-41 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BD65_1095 d179eb3de41316d0a8c44de122dc7834 227 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BD65_859 12b33b57ffdade144445a1c181c5a635 95 SUPERFAMILY SSF52794 1 86 4.45E-19 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BD65_859 12b33b57ffdade144445a1c181c5a635 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 85 2.3E-11 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BD65_859 12b33b57ffdade144445a1c181c5a635 95 Gene3D G3DSA:3.40.50.2300 1 90 5.9E-20 T 14-10-2018 BD65_96 f7682045fc18fa09f876186d96aa9c9b 55 SUPERFAMILY SSF58104 2 46 2.35E-6 T 14-10-2018 BD65_96 f7682045fc18fa09f876186d96aa9c9b 55 Gene3D G3DSA:1.10.287.950 1 51 2.6E-6 T 14-10-2018 BD65_475 80de9bff1233650fdf6bcbc710186e5a 126 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 126 22.888 T 14-10-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF BD65_475 80de9bff1233650fdf6bcbc710186e5a 126 Gene3D G3DSA:1.10.3730.20 30 126 5.2E-6 T 14-10-2018 BD65_475 80de9bff1233650fdf6bcbc710186e5a 126 SUPERFAMILY SSF103481 43 124 1.83E-9 T 14-10-2018 BD65_1103 d0b1d71bb73404ca325eb1045dacf07f 397 Gene3D G3DSA:1.10.443.10 213 387 2.7E-18 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BD65_1103 d0b1d71bb73404ca325eb1045dacf07f 397 SUPERFAMILY SSF56349 109 386 2.12E-58 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_1103 d0b1d71bb73404ca325eb1045dacf07f 397 Gene3D G3DSA:1.10.150.130 102 212 5.1E-28 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BD65_1103 d0b1d71bb73404ca325eb1045dacf07f 397 Pfam PF13356 Arm DNA-binding domain 8 92 3.7E-16 T 14-10-2018 IPR025166 Integrase, DNA-binding domain BD65_1103 d0b1d71bb73404ca325eb1045dacf07f 397 Gene3D G3DSA:3.30.160.390 6 94 2.2E-24 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily BD65_1103 d0b1d71bb73404ca325eb1045dacf07f 397 Pfam PF00589 Phage integrase family 214 377 1.4E-29 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_703 52054da4e062c767a9e6fee73c650cf8 130 Pfam PF06366 Flagellar protein FlhE 25 130 6.4E-36 T 14-10-2018 IPR009420 Flagellar protein FlhE BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 SMART SM00846 3 150 4.6E-98 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 PIRSF PIRSF000149 1 331 4.1E-135 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 Gene3D G3DSA:3.40.50.720 4 326 1.5E-158 T 14-10-2018 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.7E-71 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 SUPERFAMILY SSF51735 3 166 3.19E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 Gene3D G3DSA:3.30.360.10 149 314 1.5E-158 T 14-10-2018 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.8E-137 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 SUPERFAMILY SSF55347 149 312 4.17E-81 T 14-10-2018 BD65_227 ac8393bcee0c97fff32963f1a49ddec5 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 7.5E-41 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_127 10d10fd85834e447be924252ab1d3c28 271 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 8 264 8.8E-112 T 14-10-2018 IPR010247 N-formylglutamate deformylase BD65_127 10d10fd85834e447be924252ab1d3c28 271 Gene3D G3DSA:3.40.630.40 5 262 2.2E-68 T 14-10-2018 BD65_127 10d10fd85834e447be924252ab1d3c28 271 SUPERFAMILY SSF53187 5 260 2.76E-75 T 14-10-2018 BD65_127 10d10fd85834e447be924252ab1d3c28 271 Pfam PF05013 N-formylglutamate amidohydrolase 15 232 1.0E-63 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase BD65_2081 6ddb84358084e9d8f9ce7f79169b897c 518 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 154 472 3.4E-109 T 14-10-2018 IPR017745 BcsE, GIL domain GO:0035438 BD65_2081 6ddb84358084e9d8f9ce7f79169b897c 518 Pfam PF10995 GGDEF I-site like or GIL domain 160 472 1.0E-125 T 14-10-2018 IPR017745 BcsE, GIL domain GO:0035438 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 Gene3D G3DSA:3.40.50.720 1 180 1.4E-57 T 14-10-2018 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 Gene3D G3DSA:1.10.1040.10 181 435 2.2E-111 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 6.1E-52 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 Gene3D G3DSA:1.20.5.320 436 469 1.1E-21 T 14-10-2018 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 PIRSF PIRSF000109 1 469 4.3E-242 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.5E-89 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 467 7.6E-134 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 SUPERFAMILY SSF48179 177 468 7.37E-132 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 469 1.2E-228 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 SMART SM01350 179 468 3.7E-223 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BD65_3167 8edbb7e1406d31ad6baf0db8c62fc868 469 SUPERFAMILY SSF51735 4 172 1.29E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2116 ff9f6c5ef163a87374f02dd60fcef6e4 565 Pfam PF06580 Histidine kinase 373 450 2.4E-25 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BD65_2116 ff9f6c5ef163a87374f02dd60fcef6e4 565 Gene3D G3DSA:3.30.565.10 425 559 1.2E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2116 ff9f6c5ef163a87374f02dd60fcef6e4 565 SUPERFAMILY SSF55781 236 357 9.32E-6 T 14-10-2018 BD65_2116 ff9f6c5ef163a87374f02dd60fcef6e4 565 SUPERFAMILY SSF55874 426 558 2.6E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2116 ff9f6c5ef163a87374f02dd60fcef6e4 565 Pfam PF07694 5TMR of 5TMR-LYT 30 198 1.6E-57 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 BD65_2637 f8a8955d38b8fe5833b0c8aa517f6ef2 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 336 9.5E-20 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2637 f8a8955d38b8fe5833b0c8aa517f6ef2 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 166 9.3E-41 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2637 f8a8955d38b8fe5833b0c8aa517f6ef2 349 Gene3D G3DSA:3.30.2350.20 16 336 9.7E-122 T 14-10-2018 BD65_2637 f8a8955d38b8fe5833b0c8aa517f6ef2 349 SUPERFAMILY SSF55120 3 339 9.06E-107 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2637 f8a8955d38b8fe5833b0c8aa517f6ef2 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 4 340 5.8E-81 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2637 f8a8955d38b8fe5833b0c8aa517f6ef2 349 Gene3D G3DSA:3.30.2340.10 166 300 9.7E-122 T 14-10-2018 BD65_2637 f8a8955d38b8fe5833b0c8aa517f6ef2 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.581 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2637 f8a8955d38b8fe5833b0c8aa517f6ef2 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 BD65_1090 ae2f85f32872dc125847a6e4e0be8c81 259 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 133 139 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_1090 ae2f85f32872dc125847a6e4e0be8c81 259 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 142 2.8E-5 T 14-10-2018 BD65_1090 ae2f85f32872dc125847a6e4e0be8c81 259 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 62 76 2.8E-5 T 14-10-2018 BD65_1090 ae2f85f32872dc125847a6e4e0be8c81 259 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 184 2.8E-5 T 14-10-2018 BD65_1090 ae2f85f32872dc125847a6e4e0be8c81 259 Gene3D G3DSA:3.40.50.150 24 255 4.6E-58 T 14-10-2018 BD65_1090 ae2f85f32872dc125847a6e4e0be8c81 259 Pfam PF05175 Methyltransferase small domain 55 146 1.8E-15 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BD65_1090 ae2f85f32872dc125847a6e4e0be8c81 259 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 25 259 54.049 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 BD65_1090 ae2f85f32872dc125847a6e4e0be8c81 259 SUPERFAMILY SSF53335 26 213 2.39E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1418 8982ef4ed6b97522d3108cc5c85120dd 436 SUPERFAMILY SSF52540 5 285 4.85E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1418 8982ef4ed6b97522d3108cc5c85120dd 436 Pfam PF13166 AAA domain 221 422 4.3E-11 T 14-10-2018 IPR026866 Protein CR006, P-loop domain BD65_250 664c354d70749e522f59487e87fb62bd 890 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 6.0E-115 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BD65_250 664c354d70749e522f59487e87fb62bd 890 Gene3D G3DSA:1.20.1090.10 645 865 7.8E-62 T 14-10-2018 BD65_250 664c354d70749e522f59487e87fb62bd 890 Gene3D G3DSA:3.40.605.10 10 444 1.4E-180 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BD65_250 664c354d70749e522f59487e87fb62bd 890 PIRSF PIRSF000111 1 866 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 BD65_250 664c354d70749e522f59487e87fb62bd 890 SUPERFAMILY SSF56796 449 866 6.28E-119 T 14-10-2018 BD65_250 664c354d70749e522f59487e87fb62bd 890 Gene3D G3DSA:3.40.50.1970 450 643 2.2E-58 T 14-10-2018 BD65_250 664c354d70749e522f59487e87fb62bd 890 SUPERFAMILY SSF53720 6 453 3.27E-83 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BD65_250 664c354d70749e522f59487e87fb62bd 890 Gene3D G3DSA:3.40.309.10 218 404 1.4E-180 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BD65_250 664c354d70749e522f59487e87fb62bd 890 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BD65_250 664c354d70749e522f59487e87fb62bd 890 Pfam PF00171 Aldehyde dehydrogenase family 5 400 7.9E-28 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BD65_250 664c354d70749e522f59487e87fb62bd 890 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 Gene3D G3DSA:3.30.565.10 275 431 1.4E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 SMART SM00388 211 271 5.5E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 Gene3D G3DSA:1.10.287.130 162 272 1.5E-19 T 14-10-2018 BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 SMART SM00304 158 210 0.0022 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 SUPERFAMILY SSF47384 194 271 2.55E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 SUPERFAMILY SSF55874 260 423 2.49E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 423 2.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_371 8cdf4dc553a05240b2ac4d1ec213da6f 434 SMART SM00387 315 425 1.7E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Gene3D G3DSA:2.40.50.100 948 1022 5.5E-25 T 14-10-2018 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Gene3D G3DSA:2.40.50.100 1023 1126 1.7E-28 T 14-10-2018 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 8.3E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 SMART SM00663 235 514 1.1E-184 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 8.8E-79 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Gene3D G3DSA:1.10.150.390 1316 1375 2.7E-28 T 14-10-2018 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Gene3D G3DSA:1.10.40.90 374 416 2.0E-21 T 14-10-2018 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1374 19.021 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Gene3D G3DSA:1.10.132.30 641 790 3.9E-66 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Gene3D G3DSA:1.10.1790.20 1135 1314 4.0E-59 T 14-10-2018 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Gene3D G3DSA:2.40.50.100 1151 1215 4.0E-59 T 14-10-2018 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 SUPERFAMILY SSF64484 16 1364 0.0 T 14-10-2018 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.6E-89 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Gene3D G3DSA:1.10.274.100 490 640 4.7E-38 T 14-10-2018 BD65_1650 272324da1bcdde9d244a18b482b9a3ff 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 3.8E-27 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 SUPERFAMILY SSF63380 148 253 1.21E-28 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 Gene3D G3DSA:1.10.490.10 1 143 5.3E-48 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 SUPERFAMILY SSF52343 255 395 7.33E-38 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 4.9E-14 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 Pfam PF00042 Globin 7 102 1.9E-11 T 14-10-2018 IPR000971 Globin GO:0020037 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 1.8E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.8E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.8E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.8E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 56.153 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 Gene3D G3DSA:2.40.30.10 149 254 1.2E-33 T 14-10-2018 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 SUPERFAMILY SSF46458 1 142 2.33E-35 T 14-10-2018 IPR009050 Globin-like superfamily BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 5.5E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BD65_1057 4cd944be1c5423840e0131c70a0f19bf 396 Gene3D G3DSA:3.40.50.80 256 396 3.1E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 SUPERFAMILY SSF51735 2 150 4.14E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 390 1.4E-181 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 SUPERFAMILY SSF69055 302 392 1.7E-30 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 Gene3D G3DSA:1.10.1740.10 312 397 9.3E-29 T 14-10-2018 BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 7.2E-48 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 3.1E-41 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 Gene3D G3DSA:3.40.50.720 1 150 5.6E-57 T 14-10-2018 BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 7.0E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 47.137 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 PIRSF PIRSF006205 1 397 1.0E-157 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BD65_1191 5b4293c1d2c6412da6acdfcf3e340a86 398 SUPERFAMILY SSF55347 126 274 3.92E-63 T 14-10-2018 BD65_1738 d3fffe93af20e64577eaa782d5ba4974 345 Pfam PF12146 Serine aminopeptidase, S33 54 314 2.2E-55 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 BD65_1738 d3fffe93af20e64577eaa782d5ba4974 345 SUPERFAMILY SSF53474 35 331 7.09E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1738 d3fffe93af20e64577eaa782d5ba4974 345 Gene3D G3DSA:3.40.50.1820 28 335 1.3E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 Gene3D G3DSA:1.25.40.10 346 437 2.8E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 Gene3D G3DSA:1.25.40.10 258 345 1.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 SMART SM00028 389 422 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 SMART SM00028 355 388 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 SMART SM00028 307 340 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 SMART SM00028 499 532 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 SMART SM00028 607 640 310.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 SMART SM00028 465 498 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 SUPERFAMILY SSF48452 471 664 5.43E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 Pfam PF13432 Tetratricopeptide repeat 366 423 1.4E-4 T 14-10-2018 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 SUPERFAMILY SSF48452 63 339 3.95E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 SUPERFAMILY SSF48452 296 437 4.88E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 807 1139 4.9E-122 T 14-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 SUPERFAMILY SSF48452 594 743 1.99E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 Pfam PF13176 Tetratricopeptide repeat 310 334 0.0036 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 Pfam PF14559 Tetratricopeptide repeat 475 535 1.6E-6 T 14-10-2018 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 Pfam PF14559 Tetratricopeptide repeat 617 665 3.4E-8 T 14-10-2018 BD65_2087 a40f10b18f26d23c2b15dee9736f0121 1160 Gene3D G3DSA:1.25.40.10 43 244 2.6E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_30 f9d3c71f11d0a904302e390352eaabaf 575 SMART SM01091 492 572 4.1E-20 T 14-10-2018 IPR005170 Transporter-associated domain BD65_30 f9d3c71f11d0a904302e390352eaabaf 575 Gene3D G3DSA:3.30.70.1450 407 484 7.6E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_30 f9d3c71f11d0a904302e390352eaabaf 575 Pfam PF02080 TrkA-C domain 420 483 1.0E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BD65_30 f9d3c71f11d0a904302e390352eaabaf 575 Pfam PF03471 Transporter associated domain 493 570 1.6E-14 T 14-10-2018 IPR005170 Transporter-associated domain BD65_30 f9d3c71f11d0a904302e390352eaabaf 575 Gene3D G3DSA:1.20.1530.20 7 391 4.9E-17 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily BD65_30 f9d3c71f11d0a904302e390352eaabaf 575 Gene3D G3DSA:3.30.465.10 486 570 6.1E-11 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BD65_30 f9d3c71f11d0a904302e390352eaabaf 575 Pfam PF00999 Sodium/hydrogen exchanger family 15 387 6.7E-58 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BD65_30 f9d3c71f11d0a904302e390352eaabaf 575 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 49.984 T 14-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 BD65_30 f9d3c71f11d0a904302e390352eaabaf 575 SUPERFAMILY SSF116726 419 483 7.59E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_30 f9d3c71f11d0a904302e390352eaabaf 575 SUPERFAMILY SSF56176 497 570 6.54E-13 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 SUPERFAMILY SSF82714 724 811 1.44E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1047 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 Gene3D G3DSA:1.20.1640.10 516 1026 0.0 T 14-10-2018 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 SUPERFAMILY SSF82693 566 670 7.85E-32 T 14-10-2018 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 SUPERFAMILY SSF82866 807 1034 3.79E-45 T 14-10-2018 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 SUPERFAMILY SSF82693 135 330 1.36E-27 T 14-10-2018 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 14-10-2018 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 Gene3D G3DSA:3.30.70.1440 675 865 0.0 T 14-10-2018 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 Gene3D G3DSA:3.30.70.1430 38 821 0.0 T 14-10-2018 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 14-10-2018 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 SUPERFAMILY SSF82714 182 272 4.45E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.0E-115 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.0E-115 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 3.0E-115 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.0E-115 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.0E-115 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 3.0E-115 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.0E-115 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.0E-115 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.0E-115 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 SUPERFAMILY SSF82693 38 133 6.54E-27 T 14-10-2018 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 SUPERFAMILY SSF82866 296 497 7.06E-48 T 14-10-2018 BD65_2853 158ae082469c804c03801a9d1ea8877b 1050 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 14-10-2018 BD65_224 cc22df8281284c46bf9e6171d4fb49c6 249 Pfam PF06629 MltA-interacting protein MipA 29 249 1.9E-56 T 14-10-2018 IPR010583 MltA-interacting MipA BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 Pfam PF01726 LexA DNA binding domain 1 65 1.6E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 SUPERFAMILY SSF51306 76 198 2.09E-38 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 Gene3D G3DSA:2.10.109.10 80 202 5.2E-47 T 14-10-2018 BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.335 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 7.4E-14 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 7.4E-14 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 7.4E-14 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 Gene3D G3DSA:1.10.10.10 1 70 6.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 Pfam PF00717 Peptidase S24-like 114 179 5.7E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 1.1E-83 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BD65_1582 c7625eedd505e7b57adcf14b68f91e1a 202 SUPERFAMILY SSF46785 3 69 3.44E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_72 896e99a08c3e81a4789cb8c1b2d79c08 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.0E-7 T 14-10-2018 BD65_72 896e99a08c3e81a4789cb8c1b2d79c08 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.0E-7 T 14-10-2018 BD65_72 896e99a08c3e81a4789cb8c1b2d79c08 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.0E-7 T 14-10-2018 BD65_72 896e99a08c3e81a4789cb8c1b2d79c08 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 2.7E-15 T 14-10-2018 BD65_72 896e99a08c3e81a4789cb8c1b2d79c08 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.7E-15 T 14-10-2018 BD65_72 896e99a08c3e81a4789cb8c1b2d79c08 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.7E-15 T 14-10-2018 BD65_72 896e99a08c3e81a4789cb8c1b2d79c08 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 2.7E-15 T 14-10-2018 BD65_72 896e99a08c3e81a4789cb8c1b2d79c08 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 1.1E-65 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BD65_72 896e99a08c3e81a4789cb8c1b2d79c08 434 Gene3D G3DSA:3.50.50.100 1 409 5.2E-118 T 14-10-2018 BD65_72 896e99a08c3e81a4789cb8c1b2d79c08 434 SUPERFAMILY SSF51905 3 339 6.71E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2069 a321a26825453b7abca2d3ec880f5d15 563 Gene3D G3DSA:3.40.720.10 240 553 9.8E-58 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BD65_2069 a321a26825453b7abca2d3ec880f5d15 563 Pfam PF00884 Sulfatase 250 537 1.4E-42 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BD65_2069 a321a26825453b7abca2d3ec880f5d15 563 Pfam PF08019 Domain of unknown function (DUF1705) 57 184 3.4E-18 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 BD65_2069 a321a26825453b7abca2d3ec880f5d15 563 SUPERFAMILY SSF53649 250 500 5.98E-17 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BD65_290 2d78fad8216a801af65dcd72e60c3f65 196 SUPERFAMILY SSF52540 7 196 4.46E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_290 2d78fad8216a801af65dcd72e60c3f65 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 1.2E-6 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 BD65_290 2d78fad8216a801af65dcd72e60c3f65 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 1.0E-56 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 BD65_290 2d78fad8216a801af65dcd72e60c3f65 196 Gene3D G3DSA:3.40.50.300 6 196 3.1E-70 T 14-10-2018 BD65_290 2d78fad8216a801af65dcd72e60c3f65 196 PIRSF PIRSF015617 1 196 3.9E-65 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 BD65_290 2d78fad8216a801af65dcd72e60c3f65 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 3.5E-75 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 BD65_81 6261f0cf9c0eb1c7eea94c391755645f 373 Gene3D G3DSA:1.10.10.2510 205 372 9.8E-60 T 14-10-2018 BD65_81 6261f0cf9c0eb1c7eea94c391755645f 373 SUPERFAMILY SSF51197 6 290 1.65E-72 T 14-10-2018 BD65_81 6261f0cf9c0eb1c7eea94c391755645f 373 Gene3D G3DSA:2.60.120.650 2 204 1.5E-85 T 14-10-2018 BD65_81 6261f0cf9c0eb1c7eea94c391755645f 373 Pfam PF08007 Cupin superfamily protein 9 310 2.2E-101 T 14-10-2018 IPR003347 JmjC domain BD65_81 6261f0cf9c0eb1c7eea94c391755645f 373 SMART SM00558 85 215 1.9E-7 T 14-10-2018 IPR003347 JmjC domain BD65_2315 3c4b40349a011739bc3e86153a2e330b 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.385 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2315 3c4b40349a011739bc3e86153a2e330b 150 SUPERFAMILY SSF55653 60 149 9.68E-26 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BD65_2315 3c4b40349a011739bc3e86153a2e330b 150 Gene3D G3DSA:3.40.5.10 1 50 8.9E-25 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2315 3c4b40349a011739bc3e86153a2e330b 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2315 3c4b40349a011739bc3e86153a2e330b 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 3.6E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal BD65_2315 3c4b40349a011739bc3e86153a2e330b 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 5.5E-22 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2315 3c4b40349a011739bc3e86153a2e330b 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 5.5E-58 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2315 3c4b40349a011739bc3e86153a2e330b 150 SUPERFAMILY SSF55658 1 57 4.88E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BD65_2315 3c4b40349a011739bc3e86153a2e330b 150 Gene3D G3DSA:3.10.430.100 61 149 3.7E-31 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BD65_1049 3e524313f1978d344fe8632a869a8c1e 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 51.734 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 BD65_1049 3e524313f1978d344fe8632a869a8c1e 164 Gene3D G3DSA:1.10.10.10 1 144 1.4E-56 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1049 3e524313f1978d344fe8632a869a8c1e 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site BD65_1049 3e524313f1978d344fe8632a869a8c1e 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.0E-67 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 BD65_1049 3e524313f1978d344fe8632a869a8c1e 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 7.2E-48 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type BD65_1049 3e524313f1978d344fe8632a869a8c1e 164 Pfam PF02082 Transcriptional regulator 1 83 1.0E-27 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type BD65_1049 3e524313f1978d344fe8632a869a8c1e 164 SUPERFAMILY SSF46785 2 133 5.25E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_962 86312faf9fa9f9d993b212890b1d282f 137 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 3 135 2.8E-44 T 14-10-2018 IPR016052 Bacteriophage 933W, L0136 BD65_962 86312faf9fa9f9d993b212890b1d282f 137 Pfam PF04076 Bacterial OB fold (BOF) protein 30 135 2.2E-36 T 14-10-2018 IPR005220 Bacterial OB-fold BD65_962 86312faf9fa9f9d993b212890b1d282f 137 Gene3D G3DSA:2.40.50.200 27 137 4.9E-41 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily BD65_962 86312faf9fa9f9d993b212890b1d282f 137 SUPERFAMILY SSF101756 39 135 1.31E-33 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily BD65_2554 9d8ef5c4ced0aacbe3b8eabc72d46651 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.167 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BD65_2554 9d8ef5c4ced0aacbe3b8eabc72d46651 438 Gene3D G3DSA:3.40.50.720 2 93 1.4E-23 T 14-10-2018 BD65_2554 9d8ef5c4ced0aacbe3b8eabc72d46651 438 Gene3D G3DSA:3.40.1190.10 94 299 3.8E-80 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_2554 9d8ef5c4ced0aacbe3b8eabc72d46651 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 3.6E-125 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BD65_2554 9d8ef5c4ced0aacbe3b8eabc72d46651 438 SUPERFAMILY SSF53623 95 297 3.92E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_2554 9d8ef5c4ced0aacbe3b8eabc72d46651 438 Gene3D G3DSA:3.90.190.20 300 434 8.7E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_2554 9d8ef5c4ced0aacbe3b8eabc72d46651 438 SUPERFAMILY SSF51984 3 94 6.93E-23 T 14-10-2018 BD65_2554 9d8ef5c4ced0aacbe3b8eabc72d46651 438 SUPERFAMILY SSF53244 299 437 5.95E-50 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_2554 9d8ef5c4ced0aacbe3b8eabc72d46651 438 Pfam PF08245 Mur ligase middle domain 110 280 2.8E-28 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BD65_2554 9d8ef5c4ced0aacbe3b8eabc72d46651 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 358 4.5E-8 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BD65_390 662d5ac59afce348cd56e405fb83b231 110 SUPERFAMILY SSF103481 5 105 7.98E-20 T 14-10-2018 BD65_390 662d5ac59afce348cd56e405fb83b231 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 3.6E-27 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BD65_390 662d5ac59afce348cd56e405fb83b231 110 Gene3D G3DSA:1.10.3730.20 1 110 2.4E-36 T 14-10-2018 BD65_1579 e4efa4c2a8d11e01f6636127651ef2f1 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 65 1.8E-27 T 14-10-2018 IPR014318 Phage shock protein, PspG BD65_1579 e4efa4c2a8d11e01f6636127651ef2f1 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 2.3E-25 T 14-10-2018 IPR014318 Phage shock protein, PspG BD65_748 984d5e199204afae62fdf0974d0a4215 343 SUPERFAMILY SSF53850 24 324 1.48E-71 T 14-10-2018 BD65_748 984d5e199204afae62fdf0974d0a4215 343 Pfam PF13343 Bacterial extracellular solute-binding protein 76 284 1.2E-31 T 14-10-2018 BD65_748 984d5e199204afae62fdf0974d0a4215 343 Gene3D G3DSA:3.40.190.10 133 320 3.5E-119 T 14-10-2018 BD65_748 984d5e199204afae62fdf0974d0a4215 343 PIRSF PIRSF002825 1 340 2.6E-70 T 14-10-2018 IPR026045 Ferric binding protein BD65_748 984d5e199204afae62fdf0974d0a4215 343 Gene3D G3DSA:3.40.190.10 31 306 3.5E-119 T 14-10-2018 BD65_76 482c2d6702516bb00b380a1657587183 234 Pfam PF00005 ABC transporter 26 174 3.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_76 482c2d6702516bb00b380a1657587183 234 SMART SM00382 35 223 8.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_76 482c2d6702516bb00b380a1657587183 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 1.0E-108 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 BD65_76 482c2d6702516bb00b380a1657587183 234 SUPERFAMILY SSF52540 6 226 3.17E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_76 482c2d6702516bb00b380a1657587183 234 Gene3D G3DSA:3.40.50.300 4 230 1.6E-66 T 14-10-2018 BD65_76 482c2d6702516bb00b380a1657587183 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1696 934e7272519d0d4d243b175c0cdc13a6 758 SUPERFAMILY SSF51726 394 756 7.46E-120 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BD65_1696 934e7272519d0d4d243b175c0cdc13a6 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 756 37.566 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BD65_1696 934e7272519d0d4d243b175c0cdc13a6 758 PIRSF PIRSF000382 2 758 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BD65_1696 934e7272519d0d4d243b175c0cdc13a6 758 Gene3D G3DSA:3.20.20.210 7 522 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BD65_1696 934e7272519d0d4d243b175c0cdc13a6 758 Gene3D G3DSA:3.20.20.210 387 754 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BD65_1696 934e7272519d0d4d243b175c0cdc13a6 758 SUPERFAMILY SSF51726 5 392 2.88E-113 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BD65_1696 934e7272519d0d4d243b175c0cdc13a6 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 313 1.0E-126 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BD65_1696 934e7272519d0d4d243b175c0cdc13a6 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 756 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BD65_1696 934e7272519d0d4d243b175c0cdc13a6 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 429 751 2.3E-159 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BD65_971 a00f0e427c630865b1dfb2de3468d324 88 Gene3D G3DSA:3.30.70.920 6 76 7.8E-27 T 14-10-2018 BD65_971 a00f0e427c630865b1dfb2de3468d324 88 Hamap MF_02200 Chaperone NapD [napD]. 6 83 18.421 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly BD65_971 a00f0e427c630865b1dfb2de3468d324 88 Pfam PF03927 NapD protein 6 82 1.1E-25 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 Gene3D G3DSA:3.40.1140.10 1 227 2.5E-101 T 14-10-2018 BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 SUPERFAMILY SSF52540 22 224 1.23E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.045 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 Gene3D G3DSA:1.20.58.850 620 830 4.0E-138 T 14-10-2018 BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 SUPERFAMILY SSF52540 21 1433 8.27E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 Gene3D G3DSA:3.40.1140.10 1383 1468 2.8E-38 T 14-10-2018 BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 Gene3D G3DSA:1.20.1060.30 667 778 4.0E-138 T 14-10-2018 BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 Pfam PF04310 MukB N-terminal 2 227 3.6E-124 T 14-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 Pfam PF16330 MukB hinge domain 645 810 7.1E-73 T 14-10-2018 IPR032520 MukB, hinge domain BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 PIRSF PIRSF005246 1 1478 0.0 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 Gene3D G3DSA:1.20.58.850 581 852 4.0E-138 T 14-10-2018 BD65_3259 e7fa8f8ac7ace31e392ddf3ff54e6236 1482 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 8.0E-15 T 14-10-2018 BD65_121 a4003811107c2763f4600eeb3228881a 410 SUPERFAMILY SSF53383 17 406 8.66E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_121 a4003811107c2763f4600eeb3228881a 410 Pfam PF00202 Aminotransferase class-III 25 403 3.4E-121 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_121 a4003811107c2763f4600eeb3228881a 410 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 403 9.7E-153 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BD65_121 a4003811107c2763f4600eeb3228881a 410 PIRSF PIRSF000521 27 164 8.7E-9 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_121 a4003811107c2763f4600eeb3228881a 410 PIRSF PIRSF000521 178 408 2.0E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_121 a4003811107c2763f4600eeb3228881a 410 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 408 70.065 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BD65_121 a4003811107c2763f4600eeb3228881a 410 Gene3D G3DSA:3.90.1150.10 24 398 1.1E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_121 a4003811107c2763f4600eeb3228881a 410 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 409 1.2E-219 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 BD65_121 a4003811107c2763f4600eeb3228881a 410 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 228 265 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_121 a4003811107c2763f4600eeb3228881a 410 Gene3D G3DSA:3.40.640.10 59 310 1.1E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_2718 4b8d7093de5dbb0309b854b38eb8e3ca 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 10 109 2.0E-4 T 14-10-2018 IPR020143 Uncharacterised protein family, RP436 BD65_2718 4b8d7093de5dbb0309b854b38eb8e3ca 142 Pfam PF09335 SNARE associated Golgi protein 26 133 5.5E-9 T 14-10-2018 IPR032816 SNARE associated Golgi protein BD65_578 c48f4acbfe8cee4436432529339fc0fb 284 Gene3D G3DSA:3.40.50.150 1 272 7.5E-80 T 14-10-2018 BD65_578 c48f4acbfe8cee4436432529339fc0fb 284 Pfam PF13847 Methyltransferase domain 85 195 1.4E-11 T 14-10-2018 IPR025714 Methyltransferase domain BD65_578 c48f4acbfe8cee4436432529339fc0fb 284 SUPERFAMILY SSF53335 4 242 5.63E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_578 c48f4acbfe8cee4436432529339fc0fb 284 PIRSF PIRSF018249 1 271 4.9E-84 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 BD65_2562 b0d9c0414ab07846017448a10199dd1f 306 Gene3D G3DSA:3.30.1700.10 129 306 2.6E-75 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BD65_2562 b0d9c0414ab07846017448a10199dd1f 306 SUPERFAMILY SSF54211 135 278 6.9E-54 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2562 b0d9c0414ab07846017448a10199dd1f 306 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 2.1E-159 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BD65_2562 b0d9c0414ab07846017448a10199dd1f 306 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 5.5E-108 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BD65_2562 b0d9c0414ab07846017448a10199dd1f 306 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.027 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BD65_2562 b0d9c0414ab07846017448a10199dd1f 306 Gene3D G3DSA:3.30.230.20 1 128 6.7E-52 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BD65_2562 b0d9c0414ab07846017448a10199dd1f 306 SUPERFAMILY SSF54211 3 124 1.29E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2345 37e12091e3ac99cea81187aee429c415 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 6.0E-23 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BD65_2345 37e12091e3ac99cea81187aee429c415 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 1.0E-42 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BD65_2345 37e12091e3ac99cea81187aee429c415 97 SMART SM01103 3 86 2.6E-41 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BD65_2345 37e12091e3ac99cea81187aee429c415 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 5.7E-39 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 BD65_2345 37e12091e3ac99cea81187aee429c415 97 SUPERFAMILY SSF75471 1 96 2.88E-31 T 14-10-2018 IPR035920 YhbY-like superfamily BD65_2345 37e12091e3ac99cea81187aee429c415 97 Gene3D G3DSA:3.30.110.60 1 97 1.9E-37 T 14-10-2018 IPR035920 YhbY-like superfamily BD65_2588 008e622be8ab2c949611f34853855cb6 287 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BD65_2588 008e622be8ab2c949611f34853855cb6 287 SUPERFAMILY SSF53335 6 283 2.66E-89 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2588 008e622be8ab2c949611f34853855cb6 287 Gene3D G3DSA:2.30.140.10 1 54 1.4E-26 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BD65_2588 008e622be8ab2c949611f34853855cb6 287 Pfam PF01564 Spermine/spermidine synthase domain 60 240 6.2E-68 T 14-10-2018 BD65_2588 008e622be8ab2c949611f34853855cb6 287 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.292 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BD65_2588 008e622be8ab2c949611f34853855cb6 287 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 6.2E-18 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BD65_2588 008e622be8ab2c949611f34853855cb6 287 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 1.0E-117 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BD65_2588 008e622be8ab2c949611f34853855cb6 287 Gene3D G3DSA:3.40.50.150 55 286 3.1E-81 T 14-10-2018 BD65_3139 27bbad7c2af0482cab3ac6ca7df92971 220 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 218 4.5E-85 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BD65_3139 27bbad7c2af0482cab3ac6ca7df92971 220 SUPERFAMILY SSF55620 7 218 4.82E-75 T 14-10-2018 BD65_3139 27bbad7c2af0482cab3ac6ca7df92971 220 Gene3D G3DSA:3.30.1130.10 85 220 2.3E-54 T 14-10-2018 BD65_3139 27bbad7c2af0482cab3ac6ca7df92971 220 Pfam PF01227 GTP cyclohydrolase I 38 216 1.0E-63 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BD65_3139 27bbad7c2af0482cab3ac6ca7df92971 220 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BD65_3139 27bbad7c2af0482cab3ac6ca7df92971 220 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BD65_3139 27bbad7c2af0482cab3ac6ca7df92971 220 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.576 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BD65_3139 27bbad7c2af0482cab3ac6ca7df92971 220 Gene3D G3DSA:1.10.286.10 1 84 1.8E-37 T 14-10-2018 BD65_554 8906021fad7decac695bc005c00b3bb2 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BD65_554 8906021fad7decac695bc005c00b3bb2 460 SMART SM00487 23 220 2.2E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_554 8906021fad7decac695bc005c00b3bb2 460 Gene3D G3DSA:3.40.50.300 4 210 3.5E-69 T 14-10-2018 BD65_554 8906021fad7decac695bc005c00b3bb2 460 Pfam PF00270 DEAD/DEAH box helicase 28 193 1.7E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_554 8906021fad7decac695bc005c00b3bb2 460 SUPERFAMILY SSF52540 74 357 8.39E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_554 8906021fad7decac695bc005c00b3bb2 460 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 460 71.725 T 14-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 BD65_554 8906021fad7decac695bc005c00b3bb2 460 SMART SM00490 256 337 8.0E-30 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_554 8906021fad7decac695bc005c00b3bb2 460 Gene3D G3DSA:3.30.70.330 388 459 3.4E-20 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BD65_554 8906021fad7decac695bc005c00b3bb2 460 Gene3D G3DSA:3.40.50.300 216 387 9.4E-48 T 14-10-2018 BD65_554 8906021fad7decac695bc005c00b3bb2 460 Pfam PF00271 Helicase conserved C-terminal domain 237 337 1.7E-27 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_554 8906021fad7decac695bc005c00b3bb2 460 Pfam PF03880 DbpA RNA binding domain 387 457 1.3E-22 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BD65_2151 433d6ed1942bc270efd1f13e1d14309d 851 Pfam PF00905 Penicillin binding protein transpeptidase domain 428 600 1.5E-23 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BD65_2151 433d6ed1942bc270efd1f13e1d14309d 851 Gene3D G3DSA:3.40.710.10 243 373 1.2E-10 T 14-10-2018 BD65_2151 433d6ed1942bc270efd1f13e1d14309d 851 Pfam PF00912 Transglycosylase 55 229 1.7E-65 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2151 433d6ed1942bc270efd1f13e1d14309d 851 SUPERFAMILY SSF53955 43 257 7.59E-81 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_2151 433d6ed1942bc270efd1f13e1d14309d 851 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 785 6.1E-172 T 14-10-2018 BD65_2151 433d6ed1942bc270efd1f13e1d14309d 851 Gene3D G3DSA:1.10.3810.10 49 242 1.8E-80 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2151 433d6ed1942bc270efd1f13e1d14309d 851 Gene3D G3DSA:3.40.710.10 639 834 1.6E-23 T 14-10-2018 BD65_2151 433d6ed1942bc270efd1f13e1d14309d 851 Gene3D G3DSA:3.40.710.10 398 612 1.5E-65 T 14-10-2018 BD65_2151 433d6ed1942bc270efd1f13e1d14309d 851 SUPERFAMILY SSF56601 211 833 5.07E-112 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_2151 433d6ed1942bc270efd1f13e1d14309d 851 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 7.6E-31 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_1586 4659fd052464bde1c909b422865b29d8 167 Pfam PF04345 Chorismate lyase 14 166 2.3E-32 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 BD65_1586 4659fd052464bde1c909b422865b29d8 167 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 166 26.037 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 BD65_1586 4659fd052464bde1c909b422865b29d8 167 SUPERFAMILY SSF64288 8 166 2.47E-50 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BD65_1586 4659fd052464bde1c909b422865b29d8 167 Gene3D G3DSA:3.40.1410.10 5 166 3.8E-51 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BD65_59 347101c41b5f4971711a419d22bb6366 413 Gene3D G3DSA:3.40.47.10 1 255 7.4E-88 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_59 347101c41b5f4971711a419d22bb6366 413 SMART SM00825 Beta-ketoacyl synthase 6 413 3.6E-14 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BD65_59 347101c41b5f4971711a419d22bb6366 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site BD65_59 347101c41b5f4971711a419d22bb6366 413 SUPERFAMILY SSF53901 215 412 3.65E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_59 347101c41b5f4971711a419d22bb6366 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.2E-194 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BD65_59 347101c41b5f4971711a419d22bb6366 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 2.9E-40 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BD65_59 347101c41b5f4971711a419d22bb6366 413 SUPERFAMILY SSF53901 3 252 3.84E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_59 347101c41b5f4971711a419d22bb6366 413 PIRSF PIRSF000447 1 413 8.0E-200 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BD65_59 347101c41b5f4971711a419d22bb6366 413 Gene3D G3DSA:3.40.47.10 261 413 9.7E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_59 347101c41b5f4971711a419d22bb6366 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.1E-62 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BD65_1931 5cd545397b805fe913cebdda72d225ef 669 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 392 2.0E-38 T 14-10-2018 IPR000160 GGDEF domain BD65_1931 5cd545397b805fe913cebdda72d225ef 669 SUPERFAMILY SSF55785 123 233 9.34E-13 T 14-10-2018 IPR035965 PAS domain superfamily BD65_1931 5cd545397b805fe913cebdda72d225ef 669 SUPERFAMILY SSF141868 411 657 9.02E-84 T 14-10-2018 IPR035919 EAL domain superfamily BD65_1931 5cd545397b805fe913cebdda72d225ef 669 Gene3D G3DSA:3.20.20.450 408 662 1.6E-90 T 14-10-2018 IPR035919 EAL domain superfamily BD65_1931 5cd545397b805fe913cebdda72d225ef 669 SMART SM00091 110 176 0.0059 T 14-10-2018 IPR000014 PAS domain BD65_1931 5cd545397b805fe913cebdda72d225ef 669 Pfam PF00563 EAL domain 411 644 1.6E-67 T 14-10-2018 IPR001633 EAL domain BD65_1931 5cd545397b805fe913cebdda72d225ef 669 Pfam PF13426 PAS domain 122 224 1.2E-8 T 14-10-2018 IPR000014 PAS domain BD65_1931 5cd545397b805fe913cebdda72d225ef 669 SMART SM00052 404 649 8.8E-112 T 14-10-2018 IPR001633 EAL domain BD65_1931 5cd545397b805fe913cebdda72d225ef 669 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 114 232 2.2E-12 T 14-10-2018 IPR000014 PAS domain BD65_1931 5cd545397b805fe913cebdda72d225ef 669 Gene3D G3DSA:3.30.70.270 234 407 6.5E-58 T 14-10-2018 BD65_1931 5cd545397b805fe913cebdda72d225ef 669 SMART SM00267 225 394 1.9E-61 T 14-10-2018 IPR000160 GGDEF domain BD65_1931 5cd545397b805fe913cebdda72d225ef 669 Gene3D G3DSA:3.30.450.20 116 233 4.3E-13 T 14-10-2018 BD65_1931 5cd545397b805fe913cebdda72d225ef 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 388 1.9E-45 T 14-10-2018 IPR000160 GGDEF domain BD65_1931 5cd545397b805fe913cebdda72d225ef 669 SUPERFAMILY SSF55073 242 396 1.8E-45 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 Gene3D G3DSA:3.30.830.10 273 503 4.5E-68 T 14-10-2018 BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 Gene3D G3DSA:3.30.830.10 653 918 1.0E-123 T 14-10-2018 BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 Pfam PF16187 Middle or third domain of peptidase_M16 401 676 2.5E-57 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 76 99 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 Pfam PF05193 Peptidase M16 inactive domain 683 859 3.2E-7 T 14-10-2018 IPR007863 Peptidase M16, C-terminal BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 Pfam PF05193 Peptidase M16 inactive domain 217 393 1.7E-19 T 14-10-2018 IPR007863 Peptidase M16, C-terminal BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 SUPERFAMILY SSF63411 266 503 2.27E-67 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 Gene3D G3DSA:3.30.830.10 505 886 1.0E-123 T 14-10-2018 BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 Pfam PF00675 Insulinase (Peptidase family M16) 56 192 6.8E-33 T 14-10-2018 IPR011765 Peptidase M16, N-terminal BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 SUPERFAMILY SSF63411 505 728 1.3E-44 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 Gene3D G3DSA:3.30.830.10 26 272 3.6E-77 T 14-10-2018 BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 SUPERFAMILY SSF63411 749 957 6.33E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BD65_1221 75bcd269a3f766f798d2c4ff491e1d79 962 SUPERFAMILY SSF63411 33 263 2.38E-52 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BD65_2566 6de608076d4b39abca1d0c3a20bdb252 130 SUPERFAMILY SSF55811 1 127 2.57E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_2566 6de608076d4b39abca1d0c3a20bdb252 130 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BD65_2566 6de608076d4b39abca1d0c3a20bdb252 130 PRINTS PR01401 Mutator MutT protein signature 77 90 1.7E-11 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 BD65_2566 6de608076d4b39abca1d0c3a20bdb252 130 PRINTS PR01401 Mutator MutT protein signature 2 23 1.7E-11 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 BD65_2566 6de608076d4b39abca1d0c3a20bdb252 130 Gene3D G3DSA:3.90.79.10 1 127 1.5E-37 T 14-10-2018 BD65_2566 6de608076d4b39abca1d0c3a20bdb252 130 Pfam PF00293 NUDIX domain 6 123 4.4E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_2566 6de608076d4b39abca1d0c3a20bdb252 130 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.2E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BD65_2566 6de608076d4b39abca1d0c3a20bdb252 130 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.2E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BD65_2566 6de608076d4b39abca1d0c3a20bdb252 130 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 126 2.5E-51 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 BD65_653 06f76762465de4015d59547c52bd8190 471 Gene3D G3DSA:1.20.1740.10 17 470 5.4E-59 T 14-10-2018 BD65_653 06f76762465de4015d59547c52bd8190 471 Pfam PF00324 Amino acid permease 27 465 1.4E-112 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BD65_653 06f76762465de4015d59547c52bd8190 471 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BD65_653 06f76762465de4015d59547c52bd8190 471 PIRSF PIRSF006060 1 469 4.4E-67 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 843 25.403 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Gene3D G3DSA:3.30.420.110 130 265 3.8E-39 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 SUPERFAMILY SSF48334 270 566 1.83E-90 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 SMART SM00533 286 591 1.7E-105 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Gene3D G3DSA:3.40.50.300 570 840 2.2E-101 T 14-10-2018 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Pfam PF00488 MutS domain V 610 797 1.1E-88 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 SUPERFAMILY SSF52540 567 798 2.76E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Pfam PF05192 MutS domain III 272 559 9.6E-41 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 SMART SM00534 607 794 2.3E-123 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Gene3D G3DSA:1.10.1420.10 387 503 3.2E-106 T 14-10-2018 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Gene3D G3DSA:3.40.1170.10 2 124 7.9E-52 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Pfam PF05188 MutS domain II 131 256 6.1E-33 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 848 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Pfam PF05190 MutS family domain IV 428 517 7.0E-28 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Pfam PF01624 MutS domain I 11 122 5.2E-41 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 Gene3D G3DSA:1.10.1420.10 269 559 3.2E-106 T 14-10-2018 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 SUPERFAMILY SSF55271 6 116 2.49E-42 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 PIRSF PIRSF037677 3 189 5.1E-27 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 PIRSF PIRSF037677 203 831 2.1E-126 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 SUPERFAMILY SSF53150 117 269 2.35E-42 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BD65_2642 5636e7d7dfc8ff92ba7ffc6d6dab9657 851 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BD65_2673 0c0095df26c7c13b9c07d3815591d006 308 PRINTS PR00956 Flagellar motor switch protein FliN signature 278 293 6.9E-6 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BD65_2673 0c0095df26c7c13b9c07d3815591d006 308 PRINTS PR00956 Flagellar motor switch protein FliN signature 232 248 6.9E-6 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BD65_2673 0c0095df26c7c13b9c07d3815591d006 308 PRINTS PR00956 Flagellar motor switch protein FliN signature 249 265 6.9E-6 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BD65_2673 0c0095df26c7c13b9c07d3815591d006 308 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 233 302 1.9E-14 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) BD65_2673 0c0095df26c7c13b9c07d3815591d006 308 Gene3D G3DSA:2.30.330.10 234 303 2.8E-19 T 14-10-2018 IPR036429 SpoA-like superfamily BD65_2673 0c0095df26c7c13b9c07d3815591d006 308 SUPERFAMILY SSF101801 233 301 2.62E-14 T 14-10-2018 IPR036429 SpoA-like superfamily BD65_803 4da5f2f0c6c3b681456e1b1a0866da1a 381 Pfam PF00144 Beta-lactamase 47 359 1.6E-61 T 14-10-2018 IPR001466 Beta-lactamase-related BD65_803 4da5f2f0c6c3b681456e1b1a0866da1a 381 SUPERFAMILY SSF56601 34 359 2.23E-67 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_803 4da5f2f0c6c3b681456e1b1a0866da1a 381 Gene3D G3DSA:3.40.710.10 29 378 2.7E-128 T 14-10-2018 BD65_719 da126f9ec68987a8c205ad8c478f0115 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.806 T 14-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 BD65_719 da126f9ec68987a8c205ad8c478f0115 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 2.5E-40 T 14-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 BD65_719 da126f9ec68987a8c205ad8c478f0115 116 Gene3D G3DSA:1.10.4000.10 1 116 2.8E-48 T 14-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily BD65_719 da126f9ec68987a8c205ad8c478f0115 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 94 7.0E-45 T 14-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 BD65_719 da126f9ec68987a8c205ad8c478f0115 116 SUPERFAMILY SSF63592 1 98 2.88E-39 T 14-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily BD65_3066 a606078f83be55c6b1296e4cdd80aa7b 355 Pfam PF00005 ABC transporter 16 156 4.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3066 a606078f83be55c6b1296e4cdd80aa7b 355 SUPERFAMILY SSF50331 234 350 5.1E-22 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BD65_3066 a606078f83be55c6b1296e4cdd80aa7b 355 Pfam PF03459 TOBE domain 290 349 1.8E-17 T 14-10-2018 IPR005116 Transport-associated OB, type 1 BD65_3066 a606078f83be55c6b1296e4cdd80aa7b 355 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_3066 a606078f83be55c6b1296e4cdd80aa7b 355 Gene3D G3DSA:2.40.50.100 289 350 3.4E-15 T 14-10-2018 BD65_3066 a606078f83be55c6b1296e4cdd80aa7b 355 SMART SM00382 23 206 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3066 a606078f83be55c6b1296e4cdd80aa7b 355 SUPERFAMILY SSF52540 8 222 9.25E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3066 a606078f83be55c6b1296e4cdd80aa7b 355 Gene3D G3DSA:3.40.50.300 10 240 9.0E-56 T 14-10-2018 BD65_3066 a606078f83be55c6b1296e4cdd80aa7b 355 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 290 349 3.9E-17 T 14-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 BD65_3066 a606078f83be55c6b1296e4cdd80aa7b 355 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 2.1E-151 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 BD65_740 4a09f951d576b62c8c510148baa70244 298 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 8 294 7.0E-135 T 14-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 BD65_740 4a09f951d576b62c8c510148baa70244 298 PIRSF PIRSF015582 2 298 6.9E-76 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like BD65_740 4a09f951d576b62c8c510148baa70244 298 Gene3D G3DSA:3.20.20.60 1 295 1.9E-89 T 14-10-2018 BD65_740 4a09f951d576b62c8c510148baa70244 298 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 230 1.4E-79 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 BD65_740 4a09f951d576b62c8c510148baa70244 298 SUPERFAMILY SSF51621 8 240 6.63E-61 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BD65_744 e66dd3545fb234e8ca8be73a7beb6c69 228 Pfam PF12431 Transcriptional regulator 133 161 1.3E-6 T 14-10-2018 IPR028141 Transcriptional regulator BD65_744 e66dd3545fb234e8ca8be73a7beb6c69 228 PIRSF PIRSF006171 2 226 1.6E-72 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 BD65_744 e66dd3545fb234e8ca8be73a7beb6c69 228 SUPERFAMILY SSF52172 3 159 1.42E-31 T 14-10-2018 IPR011006 CheY-like superfamily BD65_744 e66dd3545fb234e8ca8be73a7beb6c69 228 Pfam PF00072 Response regulator receiver domain 6 117 1.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_744 e66dd3545fb234e8ca8be73a7beb6c69 228 SMART SM00448 4 117 4.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_744 e66dd3545fb234e8ca8be73a7beb6c69 228 Gene3D G3DSA:3.40.50.2300 4 149 8.1E-27 T 14-10-2018 BD65_1425 8ce77b16733165edbc26f0b0d46e39a4 259 PIRSF PIRSF003073 1 257 4.3E-91 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein BD65_1425 8ce77b16733165edbc26f0b0d46e39a4 259 SMART SM00382 101 235 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1425 8ce77b16733165edbc26f0b0d46e39a4 259 SUPERFAMILY SSF52540 70 252 2.16E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1425 8ce77b16733165edbc26f0b0d46e39a4 259 Gene3D G3DSA:3.40.50.300 65 252 7.6E-50 T 14-10-2018 BD65_1425 8ce77b16733165edbc26f0b0d46e39a4 259 Pfam PF01695 IstB-like ATP binding protein 56 235 9.9E-72 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 BD65_1425 8ce77b16733165edbc26f0b0d46e39a4 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 193 207 5.3E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_1425 8ce77b16733165edbc26f0b0d46e39a4 259 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 105 123 5.3E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_799 d320b6281861a18d2bcd1be510a3cf3d 196 Gene3D G3DSA:1.10.357.10 6 190 2.5E-22 T 14-10-2018 BD65_799 d320b6281861a18d2bcd1be510a3cf3d 196 SUPERFAMILY SSF46689 15 79 2.51E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_799 d320b6281861a18d2bcd1be510a3cf3d 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 2.2E-4 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_799 d320b6281861a18d2bcd1be510a3cf3d 196 SUPERFAMILY SSF48498 87 187 8.34E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BD65_600 9a51e04235872dd8477f18ae547b7958 368 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_600 9a51e04235872dd8477f18ae547b7958 368 PIRSF PIRSF039102 1 358 2.3E-133 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_600 9a51e04235872dd8477f18ae547b7958 368 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.464 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_600 9a51e04235872dd8477f18ae547b7958 368 Gene3D G3DSA:3.30.1490.20 155 224 2.7E-86 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BD65_600 9a51e04235872dd8477f18ae547b7958 368 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 4.8E-31 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_600 9a51e04235872dd8477f18ae547b7958 368 Gene3D G3DSA:3.30.470.20 129 353 2.7E-86 T 14-10-2018 BD65_600 9a51e04235872dd8477f18ae547b7958 368 Gene3D G3DSA:3.40.50.20 1 128 7.2E-45 T 14-10-2018 BD65_600 9a51e04235872dd8477f18ae547b7958 368 SUPERFAMILY SSF56059 140 357 1.77E-61 T 14-10-2018 BD65_600 9a51e04235872dd8477f18ae547b7958 368 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_600 9a51e04235872dd8477f18ae547b7958 368 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 1.1E-113 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_600 9a51e04235872dd8477f18ae547b7958 368 SUPERFAMILY SSF52440 3 139 1.44E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BD65_600 9a51e04235872dd8477f18ae547b7958 368 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 1.0E-76 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_3200 ac1e6391e1d6dc9fbc2cd9279b535daa 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 266 1.1E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_3200 ac1e6391e1d6dc9fbc2cd9279b535daa 281 Gene3D G3DSA:1.10.3720.10 15 270 1.7E-45 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3200 ac1e6391e1d6dc9fbc2cd9279b535daa 281 SUPERFAMILY SSF161098 9 267 2.75E-52 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 SUPERFAMILY SSF50249 637 721 8.95E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 Gene3D G3DSA:2.40.50.140 630 723 8.3E-29 T 14-10-2018 BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 SMART SM00732 326 423 7.6E-36 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 Pfam PF09371 Tex-like protein N-terminal domain 9 193 2.1E-69 T 14-10-2018 IPR018974 Tex-like protein, N-terminal BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 Gene3D G3DSA:1.10.10.650 2 109 8.5E-40 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 Gene3D G3DSA:1.10.150.310 498 629 1.1E-50 T 14-10-2018 BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 Pfam PF00575 S1 RNA binding domain 648 719 4.5E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 SUPERFAMILY SSF158832 3 321 6.8E-119 T 14-10-2018 BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 Pfam PF12836 Helix-hairpin-helix motif 490 554 1.3E-28 T 14-10-2018 BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 Gene3D G3DSA:3.30.420.140 325 450 1.2E-152 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 SUPERFAMILY SSF53098 322 468 6.07E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 SUPERFAMILY SSF47781 469 557 9.0E-29 T 14-10-2018 IPR010994 RuvA domain 2-like BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 Gene3D G3DSA:1.10.3500.10 112 497 1.2E-152 T 14-10-2018 IPR023323 Tex-like domain superfamily BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 Pfam PF16921 Tex protein YqgF-like domain 327 450 4.0E-49 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 SUPERFAMILY SSF47781 559 631 7.34E-20 T 14-10-2018 IPR010994 RuvA domain 2-like BD65_2136 4f78815b7b018fe50226c36a8ab746ca 782 SMART SM00316 648 719 1.8E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_2855 ca5ed2693fcc5f9fd7d16eaf243685b8 216 SUPERFAMILY SSF48498 85 202 1.71E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BD65_2855 ca5ed2693fcc5f9fd7d16eaf243685b8 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.2E-19 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_2855 ca5ed2693fcc5f9fd7d16eaf243685b8 216 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BD65_2855 ca5ed2693fcc5f9fd7d16eaf243685b8 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.3E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_2855 ca5ed2693fcc5f9fd7d16eaf243685b8 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.3E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_2855 ca5ed2693fcc5f9fd7d16eaf243685b8 216 Gene3D G3DSA:1.10.357.10 1 214 8.6E-82 T 14-10-2018 BD65_2855 ca5ed2693fcc5f9fd7d16eaf243685b8 216 SUPERFAMILY SSF46689 1 65 1.45E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2855 ca5ed2693fcc5f9fd7d16eaf243685b8 216 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 3.2E-52 T 14-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 BD65_2692 dc4bf64cf095f5f72fcee7c739e01d61 345 SUPERFAMILY SSF158544 237 301 3.14E-17 T 14-10-2018 IPR038072 GspK, central domain superfamily BD65_2692 dc4bf64cf095f5f72fcee7c739e01d61 345 Pfam PF03934 Type II secretion system (T2SS), protein K 23 334 2.6E-73 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BD65_2692 dc4bf64cf095f5f72fcee7c739e01d61 345 SUPERFAMILY SSF158544 90 235 6.54E-24 T 14-10-2018 IPR038072 GspK, central domain superfamily BD65_2692 dc4bf64cf095f5f72fcee7c739e01d61 345 PIRSF PIRSF002786 133 345 5.6E-37 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BD65_2692 dc4bf64cf095f5f72fcee7c739e01d61 345 PIRSF PIRSF002786 1 116 3.5E-17 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BD65_2692 dc4bf64cf095f5f72fcee7c739e01d61 345 Gene3D G3DSA:1.10.40.60 88 237 2.7E-58 T 14-10-2018 IPR038072 GspK, central domain superfamily BD65_2692 dc4bf64cf095f5f72fcee7c739e01d61 345 Gene3D G3DSA:3.30.1300.30 33 329 2.7E-58 T 14-10-2018 BD65_2692 dc4bf64cf095f5f72fcee7c739e01d61 345 Gene3D G3DSA:1.10.40.60 238 304 2.7E-58 T 14-10-2018 IPR038072 GspK, central domain superfamily BD65_2692 dc4bf64cf095f5f72fcee7c739e01d61 345 SUPERFAMILY SSF54523 26 342 2.2E-22 T 14-10-2018 BD65_179 80d15b818f2323f6c7ede8ad4e7ddb16 161 SUPERFAMILY SSF55811 4 145 1.49E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_179 80d15b818f2323f6c7ede8ad4e7ddb16 161 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BD65_179 80d15b818f2323f6c7ede8ad4e7ddb16 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 5.9E-43 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 BD65_179 80d15b818f2323f6c7ede8ad4e7ddb16 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 5.9E-43 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 BD65_179 80d15b818f2323f6c7ede8ad4e7ddb16 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 5.9E-43 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 BD65_179 80d15b818f2323f6c7ede8ad4e7ddb16 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 5.9E-43 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 BD65_179 80d15b818f2323f6c7ede8ad4e7ddb16 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 5.9E-43 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 BD65_179 80d15b818f2323f6c7ede8ad4e7ddb16 161 Gene3D G3DSA:3.90.79.10 2 147 1.5E-40 T 14-10-2018 BD65_179 80d15b818f2323f6c7ede8ad4e7ddb16 161 Pfam PF00293 NUDIX domain 5 126 7.5E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 Gene3D G3DSA:3.40.190.10 55 364 3.4E-145 T 14-10-2018 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 Gene3D G3DSA:3.40.190.10 145 395 3.4E-145 T 14-10-2018 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 Pfam PF13416 Bacterial extracellular solute-binding protein 57 351 2.0E-39 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 PRINTS PR00181 Maltose binding protein signature 137 156 4.7E-91 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 PRINTS PR00181 Maltose binding protein signature 43 61 4.7E-91 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 PRINTS PR00181 Maltose binding protein signature 240 259 4.7E-91 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 PRINTS PR00181 Maltose binding protein signature 306 327 4.7E-91 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 PRINTS PR00181 Maltose binding protein signature 77 95 4.7E-91 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 PRINTS PR00181 Maltose binding protein signature 178 197 4.7E-91 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 PRINTS PR00181 Maltose binding protein signature 364 383 4.7E-91 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 PRINTS PR00181 Maltose binding protein signature 158 177 4.7E-91 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BD65_1591 e7df5a93941c33af5b18a8ae1cb2c992 403 SUPERFAMILY SSF53850 36 402 7.91E-92 T 14-10-2018 BD65_2826 9883c5fc35066436b99f3b7c06fa313e 316 Gene3D G3DSA:2.60.40.420 113 283 1.4E-59 T 14-10-2018 IPR008972 Cupredoxin BD65_2826 9883c5fc35066436b99f3b7c06fa313e 316 Gene3D G3DSA:1.10.287.90 28 112 2.3E-32 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2826 9883c5fc35066436b99f3b7c06fa313e 316 SUPERFAMILY SSF81464 27 116 6.21E-23 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2826 9883c5fc35066436b99f3b7c06fa313e 316 Pfam PF06481 COX Aromatic Rich Motif 240 286 7.9E-21 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 BD65_2826 9883c5fc35066436b99f3b7c06fa313e 316 PIRSF PIRSF000292 1 313 7.6E-132 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 BD65_2826 9883c5fc35066436b99f3b7c06fa313e 316 SUPERFAMILY SSF49503 125 282 9.13E-53 T 14-10-2018 IPR008972 Cupredoxin BD65_2826 9883c5fc35066436b99f3b7c06fa313e 316 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 220 9.4E-6 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2826 9883c5fc35066436b99f3b7c06fa313e 316 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 240 7.2E-113 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 BD65_438 970210e20abe7841db241d8828169329 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 7.4E-47 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related BD65_438 970210e20abe7841db241d8828169329 115 PIRSF PIRSF005894 1 107 7.2E-52 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 BD65_438 970210e20abe7841db241d8828169329 115 SUPERFAMILY SSF52833 2 101 1.43E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_438 970210e20abe7841db241d8828169329 115 Pfam PF00462 Glutaredoxin 16 80 1.1E-18 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BD65_438 970210e20abe7841db241d8828169329 115 Gene3D G3DSA:3.40.30.10 1 107 5.5E-33 T 14-10-2018 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 SUPERFAMILY SSF81624 2 138 2.35E-43 T 14-10-2018 IPR035937 MutM-like, N-terminal BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 3.9E-101 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 SUPERFAMILY SSF46946 130 222 1.24E-30 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.726 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 5.6E-28 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 7.8E-10 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.2E-30 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 SMART SM01232 129 221 9.5E-50 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 Gene3D G3DSA:3.20.190.10 2 128 7.4E-43 T 14-10-2018 IPR035937 MutM-like, N-terminal BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 Gene3D G3DSA:1.10.8.50 139 269 1.1E-47 T 14-10-2018 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 SUPERFAMILY SSF57716 217 268 5.99E-17 T 14-10-2018 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 BD65_1919 9e1de8f7aa7e94b6472f89cdc6b02781 269 SMART SM00898 2 115 1.1E-53 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BD65_1783 e864c515385563236b03ca1d6f987e79 672 SUPERFAMILY SSF52540 2 639 2.22E-163 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1783 e864c515385563236b03ca1d6f987e79 672 Gene3D G3DSA:1.10.10.160 108 181 2.5E-102 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily BD65_1783 e864c515385563236b03ca1d6f987e79 672 Gene3D G3DSA:3.40.50.300 274 632 4.7E-133 T 14-10-2018 BD65_1783 e864c515385563236b03ca1d6f987e79 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.9 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 BD65_1783 e864c515385563236b03ca1d6f987e79 672 Gene3D G3DSA:1.10.486.10 377 544 4.7E-133 T 14-10-2018 BD65_1783 e864c515385563236b03ca1d6f987e79 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 5.1E-77 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BD65_1783 e864c515385563236b03ca1d6f987e79 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 666 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 BD65_1783 e864c515385563236b03ca1d6f987e79 672 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 3.1E-71 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BD65_1783 e864c515385563236b03ca1d6f987e79 672 Gene3D G3DSA:3.40.50.300 4 266 2.5E-102 T 14-10-2018 BD65_2057 86b058a593787084709dbf9cb8988ad3 249 PIRSF PIRSF026671 4 249 1.0E-64 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 BD65_2057 86b058a593787084709dbf9cb8988ad3 249 Pfam PF01427 D-ala-D-ala dipeptidase 180 248 2.3E-17 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 BD65_2057 86b058a593787084709dbf9cb8988ad3 249 Pfam PF01427 D-ala-D-ala dipeptidase 32 163 4.9E-18 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 BD65_2057 86b058a593787084709dbf9cb8988ad3 249 Gene3D G3DSA:3.30.1380.10 31 249 6.2E-69 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BD65_2057 86b058a593787084709dbf9cb8988ad3 249 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 33 247 31.097 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 BD65_2057 86b058a593787084709dbf9cb8988ad3 249 SUPERFAMILY SSF55166 31 248 8.24E-59 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BD65_2997 93bae2180b6a2e607d476a565688233b 676 SUPERFAMILY SSF51261 522 671 9.24E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif BD65_2997 93bae2180b6a2e607d476a565688233b 676 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 482 3.1E-20 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BD65_2997 93bae2180b6a2e607d476a565688233b 676 SUPERFAMILY SSF55604 422 495 5.36E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BD65_2997 93bae2180b6a2e607d476a565688233b 676 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 435 452 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BD65_2997 93bae2180b6a2e607d476a565688233b 676 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 590 602 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BD65_2997 93bae2180b6a2e607d476a565688233b 676 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 528 651 1.2E-46 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BD65_2997 93bae2180b6a2e607d476a565688233b 676 Gene3D G3DSA:2.70.70.10 518 675 5.9E-53 T 14-10-2018 IPR011055 Duplicated hybrid motif BD65_2997 93bae2180b6a2e607d476a565688233b 676 Pfam PF02378 Phosphotransferase system, EIIC 12 324 7.9E-77 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BD65_2997 93bae2180b6a2e607d476a565688233b 676 Pfam PF00367 phosphotransferase system, EIIB 425 457 3.3E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BD65_2997 93bae2180b6a2e607d476a565688233b 676 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 493 3.8E-204 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 BD65_2997 93bae2180b6a2e607d476a565688233b 676 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 528 648 2.3E-47 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BD65_2997 93bae2180b6a2e607d476a565688233b 676 Gene3D G3DSA:3.30.1360.60 418 498 1.8E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BD65_2977 b1d257e8c7ecc2515c3bfdcefe7672b6 298 Gene3D G3DSA:3.40.190.10 131 226 6.6E-101 T 14-10-2018 BD65_2977 b1d257e8c7ecc2515c3bfdcefe7672b6 298 SUPERFAMILY SSF53850 3 270 7.41E-62 T 14-10-2018 BD65_2977 b1d257e8c7ecc2515c3bfdcefe7672b6 298 SMART SM00062 37 269 4.7E-67 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_2977 b1d257e8c7ecc2515c3bfdcefe7672b6 298 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 267 1.0E-46 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_2977 b1d257e8c7ecc2515c3bfdcefe7672b6 298 Gene3D G3DSA:3.40.190.10 27 272 6.6E-101 T 14-10-2018 BD65_1772 6991670040c9ad7f45658e50d2a9ce39 246 Pfam PF00583 Acetyltransferase (GNAT) family 145 226 8.6E-12 T 14-10-2018 IPR000182 GNAT domain BD65_1772 6991670040c9ad7f45658e50d2a9ce39 246 SUPERFAMILY SSF55729 45 235 4.63E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_1772 6991670040c9ad7f45658e50d2a9ce39 246 Gene3D G3DSA:3.40.630.30 1 240 2.3E-69 T 14-10-2018 BD65_1772 6991670040c9ad7f45658e50d2a9ce39 246 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 240 8.7E-96 T 14-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 BD65_1772 6991670040c9ad7f45658e50d2a9ce39 246 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 240 44.944 T 14-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 BD65_3261 fb7b10a20f0c1f32ee4750d5edc76ec3 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.9E-61 T 14-10-2018 IPR010275 Protein of unknown function DUF882 BD65_3261 fb7b10a20f0c1f32ee4750d5edc76ec3 182 Gene3D G3DSA:3.30.1380.10 61 182 1.3E-10 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BD65_3261 fb7b10a20f0c1f32ee4750d5edc76ec3 182 SUPERFAMILY SSF55166 68 182 3.14E-32 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 1.3E-89 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 1.3E-89 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 1.3E-89 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.3E-89 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 1.3E-89 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.3E-89 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.3E-89 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 1.3E-89 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.3E-89 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 Gene3D G3DSA:1.20.1740.10 2 402 7.0E-6 T 14-10-2018 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 5.5E-139 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site BD65_824 3639ec1841266c1922f49e6e7a011a1c 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 1.4E-136 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 BD65_1202 a8ce4d822a95c438965b1a666c328a83 109 Gene3D G3DSA:1.20.1440.40 1 105 8.8E-35 T 14-10-2018 IPR036814 YqcC-like superfamily BD65_1202 a8ce4d822a95c438965b1a666c328a83 109 Pfam PF04287 tRNA pseudouridine synthase C 6 103 6.8E-35 T 14-10-2018 IPR023376 YqcC-like domain BD65_1202 a8ce4d822a95c438965b1a666c328a83 109 SUPERFAMILY SSF158452 1 105 2.35E-37 T 14-10-2018 IPR036814 YqcC-like superfamily BD65_1202 a8ce4d822a95c438965b1a666c328a83 109 PIRSF PIRSF006257 1 108 7.7E-40 T 14-10-2018 IPR007384 Protein of unknown function UCP006257 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 9.7E-18 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 SMART SM00382 348 492 6.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 SUPERFAMILY SSF54211 595 771 9.86E-58 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 Gene3D G3DSA:3.30.230.10 585 772 7.1E-86 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 4.5E-44 T 14-10-2018 IPR003111 Lon, substrate-binding domain BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.161 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 Gene3D G3DSA:1.20.58.1480 120 245 3.0E-47 T 14-10-2018 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 Gene3D G3DSA:3.40.50.300 314 490 4.9E-61 T 14-10-2018 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 Gene3D G3DSA:1.10.8.60 491 584 1.4E-32 T 14-10-2018 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 1.7E-56 T 14-10-2018 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 1.7E-56 T 14-10-2018 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 1.7E-56 T 14-10-2018 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 1.7E-56 T 14-10-2018 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 1.7E-56 T 14-10-2018 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 SUPERFAMILY SSF52540 313 586 3.42E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 PIRSF PIRSF001174 1 775 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 SUPERFAMILY SSF88697 10 201 1.44E-52 T 14-10-2018 IPR015947 PUA-like superfamily BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 2.6E-95 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 Gene3D G3DSA:2.30.130.40 1 118 2.1E-38 T 14-10-2018 BD65_2834 4a72aeaa24240c46ddf6a0a4387c207c 784 SMART SM00464 10 202 4.7E-84 T 14-10-2018 IPR003111 Lon, substrate-binding domain BD65_3154 8360943650bf293589463d0426c791fd 324 Pfam PF07282 Putative transposase DNA-binding domain 226 293 1.8E-23 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal BD65_3154 8360943650bf293589463d0426c791fd 324 Pfam PF01385 Probable transposase 85 197 1.8E-27 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 BD65_3154 8360943650bf293589463d0426c791fd 324 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 166 253 3.0E-10 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal BD65_1123 63dd7a48e9a9f62c079143a4f3b01eba 498 Gene3D G3DSA:3.40.50.300 252 497 1.2E-44 T 14-10-2018 BD65_1123 63dd7a48e9a9f62c079143a4f3b01eba 498 Gene3D G3DSA:3.40.50.300 2 239 3.9E-57 T 14-10-2018 BD65_1123 63dd7a48e9a9f62c079143a4f3b01eba 498 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1123 63dd7a48e9a9f62c079143a4f3b01eba 498 Pfam PF00005 ABC transporter 274 428 1.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1123 63dd7a48e9a9f62c079143a4f3b01eba 498 SUPERFAMILY SSF52540 7 234 6.06E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1123 63dd7a48e9a9f62c079143a4f3b01eba 498 SMART SM00382 32 222 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1123 63dd7a48e9a9f62c079143a4f3b01eba 498 SMART SM00382 282 477 0.012 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1123 63dd7a48e9a9f62c079143a4f3b01eba 498 Pfam PF00005 ABC transporter 23 174 4.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1123 63dd7a48e9a9f62c079143a4f3b01eba 498 SUPERFAMILY SSF52540 262 489 1.43E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1654 197e6a3438173656d515c0138bfa3144 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_1654 197e6a3438173656d515c0138bfa3144 234 SUPERFAMILY SSF56808 6 225 1.07E-82 T 14-10-2018 IPR023674 Ribosomal protein L1-like BD65_1654 197e6a3438173656d515c0138bfa3144 234 PIRSF PIRSF002155 1 227 1.0E-78 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_1654 197e6a3438173656d515c0138bfa3144 234 Gene3D G3DSA:3.40.50.790 68 159 3.7E-80 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BD65_1654 197e6a3438173656d515c0138bfa3144 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.248 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BD65_1654 197e6a3438173656d515c0138bfa3144 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.7E-51 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BD65_1654 197e6a3438173656d515c0138bfa3144 234 Gene3D G3DSA:3.30.190.20 25 222 3.7E-80 T 14-10-2018 BD65_1654 197e6a3438173656d515c0138bfa3144 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 7.9E-107 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BD65_1523 259f5e3ff732d20b7d258b00d2104933 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 8.5E-53 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 BD65_1523 259f5e3ff732d20b7d258b00d2104933 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 BD65_1523 259f5e3ff732d20b7d258b00d2104933 128 SUPERFAMILY SSF55298 4 127 1.15E-42 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BD65_1523 259f5e3ff732d20b7d258b00d2104933 128 Gene3D G3DSA:3.30.1330.40 1 128 3.3E-47 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BD65_1523 259f5e3ff732d20b7d258b00d2104933 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 2.0E-43 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BD65_58 7546342fdd6ce8031c9e2a5ef69dd3ee 78 Gene3D G3DSA:1.10.1200.10 1 78 1.3E-28 T 14-10-2018 IPR036736 ACP-like superfamily BD65_58 7546342fdd6ce8031c9e2a5ef69dd3ee 78 SUPERFAMILY SSF47336 2 76 9.55E-23 T 14-10-2018 IPR036736 ACP-like superfamily BD65_58 7546342fdd6ce8031c9e2a5ef69dd3ee 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.925 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BD65_58 7546342fdd6ce8031c9e2a5ef69dd3ee 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 1.1E-36 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BD65_58 7546342fdd6ce8031c9e2a5ef69dd3ee 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.1E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BD65_58 7546342fdd6ce8031c9e2a5ef69dd3ee 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 Gene3D G3DSA:1.10.40.30 363 433 8.7E-148 T 14-10-2018 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 Pfam PF00206 Lyase 6 301 5.8E-94 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 Gene3D G3DSA:1.20.200.10 108 446 8.7E-148 T 14-10-2018 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 5.0E-68 T 14-10-2018 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 5.0E-68 T 14-10-2018 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 5.0E-68 T 14-10-2018 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 5.0E-68 T 14-10-2018 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 5.0E-68 T 14-10-2018 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 5.0E-68 T 14-10-2018 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.6E-207 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.0E-23 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 SUPERFAMILY SSF48557 3 453 3.93E-139 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 Gene3D G3DSA:1.10.275.10 1 107 5.6E-36 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.078 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BD65_1822 36c2bbf99eb24bd8b6ca2bd6cd10a4af 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BD65_1078 0f17971f9633dbd0665d0bf031e1b558 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 5.5E-39 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BD65_1078 0f17971f9633dbd0665d0bf031e1b558 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 7.4E-52 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BD65_1078 0f17971f9633dbd0665d0bf031e1b558 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 93 1.0E-38 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BD65_1078 0f17971f9633dbd0665d0bf031e1b558 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 2.2E-24 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BD65_1078 0f17971f9633dbd0665d0bf031e1b558 126 SUPERFAMILY SSF56214 3 125 1.14E-29 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BD65_1078 0f17971f9633dbd0665d0bf031e1b558 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 25.95 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BD65_1078 0f17971f9633dbd0665d0bf031e1b558 126 Gene3D G3DSA:3.90.470.20 1 126 1.4E-39 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BD65_1175 75b5bdcdd5558dbac5406b9347fab4ce 133 SUPERFAMILY SSF54593 3 129 1.06E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BD65_1175 75b5bdcdd5558dbac5406b9347fab4ce 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 7.0E-21 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BD65_1175 75b5bdcdd5558dbac5406b9347fab4ce 133 Gene3D G3DSA:3.10.180.10 9 128 3.5E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BD65_2186 871d3dcdb167b70e0e63eff4851cfc96 326 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 226 267 - T 14-10-2018 IPR000952 AB hydrolase 4, conserved site BD65_2186 871d3dcdb167b70e0e63eff4851cfc96 326 Pfam PF00561 alpha/beta hydrolase fold 62 298 1.4E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BD65_2186 871d3dcdb167b70e0e63eff4851cfc96 326 PIRSF PIRSF005211 2 326 5.1E-102 T 14-10-2018 IPR012020 AB hydrolase 4 family BD65_2186 871d3dcdb167b70e0e63eff4851cfc96 326 Gene3D G3DSA:3.40.50.1820 44 325 1.1E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_2186 871d3dcdb167b70e0e63eff4851cfc96 326 SUPERFAMILY SSF53474 33 299 1.76E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 SUPERFAMILY SSF53633 10 297 6.55E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 Gene3D G3DSA:3.30.70.260 315 385 4.0E-31 T 14-10-2018 BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 SUPERFAMILY SSF55021 383 454 7.63E-15 T 14-10-2018 BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 9 455 2.4E-130 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 Gene3D G3DSA:1.20.120.1320 48 140 7.4E-100 T 14-10-2018 BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 Pfam PF00696 Amino acid kinase family 10 283 7.6E-45 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 10 455 6.3E-141 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 PIRSF PIRSF000726 8 455 5.2E-149 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 Gene3D G3DSA:3.40.1160.10 12 295 7.4E-100 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 SUPERFAMILY SSF55021 302 400 1.34E-17 T 14-10-2018 BD65_1597 703eb515eaa138e9c7748ef85a53c365 455 Gene3D G3DSA:3.30.70.260 386 455 6.8E-17 T 14-10-2018 BD65_825 107921ffc33d6e3af260c8133947db99 180 SUPERFAMILY SSF56925 40 180 2.12E-10 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BD65_825 107921ffc33d6e3af260c8133947db99 180 Pfam PF07437 YfaZ precursor 1 180 1.3E-80 T 14-10-2018 IPR009998 YfaZ BD65_473 2a48e70d0cbf4078b995d570fed9b57d 338 Gene3D G3DSA:3.30.930.10 3 249 4.2E-87 T 14-10-2018 BD65_473 2a48e70d0cbf4078b995d570fed9b57d 338 SUPERFAMILY SSF82649 248 337 1.41E-24 T 14-10-2018 BD65_473 2a48e70d0cbf4078b995d570fed9b57d 338 Gene3D G3DSA:3.30.390.50 250 338 2.7E-29 T 14-10-2018 BD65_473 2a48e70d0cbf4078b995d570fed9b57d 338 SUPERFAMILY SSF55681 4 247 4.14E-78 T 14-10-2018 BD65_473 2a48e70d0cbf4078b995d570fed9b57d 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 57.316 T 14-10-2018 IPR023741 Lipoate-protein ligase A GO:0009249|GO:0016979 KEGG: 00785+6.3.1.20 BD65_473 2a48e70d0cbf4078b995d570fed9b57d 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 4.6E-19 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 BD65_473 2a48e70d0cbf4078b995d570fed9b57d 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 5 328 4.9E-122 T 14-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 BD65_473 2a48e70d0cbf4078b995d570fed9b57d 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 6.4E-9 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BD65_1033 648e6c6f79c609d78fd8eba9ddcf54ba 322 SMART SM00530 18 79 4.2E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BD65_1033 648e6c6f79c609d78fd8eba9ddcf54ba 322 Gene3D G3DSA:1.10.260.40 5 112 8.3E-21 T 14-10-2018 BD65_1033 648e6c6f79c609d78fd8eba9ddcf54ba 322 Pfam PF13413 Helix-turn-helix domain 18 79 4.2E-16 T 14-10-2018 BD65_1033 648e6c6f79c609d78fd8eba9ddcf54ba 322 SUPERFAMILY SSF47413 12 56 6.76E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_1033 648e6c6f79c609d78fd8eba9ddcf54ba 322 Pfam PF13464 Domain of unknown function (DUF4115) 245 319 1.1E-23 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 2.6E-117 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 618 0.0 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 SUPERFAMILY SSF52922 491 618 1.22E-30 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 619 45.504 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 SUPERFAMILY SSF52518 316 503 3.34E-56 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 SMART SM00861 319 483 1.9E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 3.9E-37 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 Gene3D G3DSA:3.40.50.920 494 619 9.2E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 Pfam PF02780 Transketolase, C-terminal domain 497 610 1.1E-25 T 14-10-2018 IPR033248 Transketolase, C-terminal domain BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 Gene3D G3DSA:3.40.50.970 316 490 2.2E-65 T 14-10-2018 BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 SUPERFAMILY SSF52518 9 381 4.25E-77 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_2810 125aa734d72948a8f3ef00c67896cf1f 619 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BD65_1362 1a015df9a2fefc8a3e8deab60622817b 277 Pfam PF00482 Type II secretion system (T2SS), protein F 136 264 7.5E-13 T 14-10-2018 IPR018076 Type II secretion system F domain BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 SUPERFAMILY SSF82714 182 272 1.44E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 SUPERFAMILY SSF82866 807 1031 6.8E-46 T 14-10-2018 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 14-10-2018 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 Gene3D G3DSA:1.20.1640.10 516 1024 0.0 T 14-10-2018 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 SUPERFAMILY SSF82693 39 131 3.4E-27 T 14-10-2018 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 14-10-2018 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 SUPERFAMILY SSF82714 723 810 1.19E-23 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 Gene3D G3DSA:3.30.70.1430 38 820 0.0 T 14-10-2018 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 Gene3D G3DSA:3.30.70.1440 675 864 0.0 T 14-10-2018 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 SUPERFAMILY SSF82693 566 672 3.71E-27 T 14-10-2018 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.7E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.7E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.7E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.7E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.7E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.7E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.7E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.7E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.7E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 14-10-2018 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 SUPERFAMILY SSF82693 136 330 8.89E-26 T 14-10-2018 BD65_975 a7d4c0b6d084e58e988e4bb334c48ccd 1050 SUPERFAMILY SSF82866 296 497 1.57E-48 T 14-10-2018 BD65_2915 f4505e75d4f6fe37e46feba8229dc7af 176 Pfam PF00419 Fimbrial protein 29 176 1.2E-7 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 BD65_2915 f4505e75d4f6fe37e46feba8229dc7af 176 Gene3D G3DSA:2.60.40.1090 24 175 1.4E-23 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 BD65_2915 f4505e75d4f6fe37e46feba8229dc7af 176 SUPERFAMILY SSF49401 36 176 3.18E-27 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_1525 9129d853ce59b04686934db92a51e12e 471 SUPERFAMILY SSF55604 10 82 2.35E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BD65_1525 9129d853ce59b04686934db92a51e12e 471 Pfam PF00367 phosphotransferase system, EIIB 11 39 8.1E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BD65_1525 9129d853ce59b04686934db92a51e12e 471 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BD65_1525 9129d853ce59b04686934db92a51e12e 471 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 5.2E-208 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 BD65_1525 9129d853ce59b04686934db92a51e12e 471 Gene3D G3DSA:3.30.1360.60 2 78 9.6E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BD65_1525 9129d853ce59b04686934db92a51e12e 471 Pfam PF02378 Phosphotransferase system, EIIC 112 404 7.5E-33 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BD65_1525 9129d853ce59b04686934db92a51e12e 471 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 1.9E-14 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 472 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 SMART SM01231 270 333 2.9E-20 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 SMART SM00073 5 102 2.1E-29 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 SUPERFAMILY SSF47384 271 334 2.51E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 SUPERFAMILY SSF55874 336 516 1.18E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Pfam PF01627 Hpt domain 9 104 2.3E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Gene3D G3DSA:2.40.50.180 541 605 1.1E-38 T 14-10-2018 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Pfam PF09078 CheY binding 158 220 8.5E-24 T 14-10-2018 IPR015162 CheY binding BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 SUPERFAMILY SSF47226 7 126 1.65E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Pfam PF01584 CheW-like domain 523 649 1.6E-25 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 SUPERFAMILY SSF55052 157 220 7.85E-20 T 14-10-2018 IPR035891 CheY-binding domain of CheA BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 SUPERFAMILY SSF50341 517 649 4.05E-31 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 SMART SM00260 510 650 2.2E-42 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Gene3D G3DSA:3.30.565.10 334 517 4.0E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Gene3D G3DSA:2.30.30.40 518 646 1.1E-38 T 14-10-2018 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 517 1.7E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 SMART SM00387 378 518 2.3E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Gene3D G3DSA:1.10.287.560 270 333 1.9E-16 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Gene3D G3DSA:3.30.70.400 153 223 3.4E-26 T 14-10-2018 IPR035891 CheY-binding domain of CheA BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Gene3D G3DSA:1.20.120.160 1 145 1.0E-43 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_715 74f77d5dd67d4d635d2f2b8f46337228 665 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 271 333 4.8E-17 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BD65_1723 07f4dae78736b0ec96624282b9472154 205 PIRSF PIRSF004553 12 192 2.5E-59 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BD65_1723 07f4dae78736b0ec96624282b9472154 205 Gene3D G3DSA:3.40.50.150 1 200 3.6E-65 T 14-10-2018 BD65_1723 07f4dae78736b0ec96624282b9472154 205 SUPERFAMILY SSF53335 12 191 6.61E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1723 07f4dae78736b0ec96624282b9472154 205 Pfam PF03602 Conserved hypothetical protein 95 13 188 9.2E-62 T 14-10-2018 BD65_1723 07f4dae78736b0ec96624282b9472154 205 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 7.6E-66 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BD65_1723 07f4dae78736b0ec96624282b9472154 205 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_2785 7d2e12645d6b86af32432d2b187f7fc5 95 Gene3D G3DSA:2.60.120.10 1 94 7.1E-32 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_2785 7d2e12645d6b86af32432d2b187f7fc5 95 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 7.3E-32 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 BD65_2785 7d2e12645d6b86af32432d2b187f7fc5 95 SUPERFAMILY SSF51182 1 94 1.82E-31 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BD65_2785 7d2e12645d6b86af32432d2b187f7fc5 95 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 94 25.027 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 BD65_2209 d305b00517326bef1e89d277cb230d97 201 Gene3D G3DSA:3.40.1370.10 3 201 2.7E-68 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BD65_2209 d305b00517326bef1e89d277cb230d97 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.6E-74 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2209 d305b00517326bef1e89d277cb230d97 201 SUPERFAMILY SSF52166 9 200 7.19E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BD65_2209 d305b00517326bef1e89d277cb230d97 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.998 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2209 d305b00517326bef1e89d277cb230d97 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 6.3E-64 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 BD65_2805 cc6a3aca013f293a20d446520234ae5a 369 SUPERFAMILY SSF53597 145 363 8.25E-57 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BD65_2805 cc6a3aca013f293a20d446520234ae5a 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 362 5.8E-141 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BD65_2805 cc6a3aca013f293a20d446520234ae5a 369 SUPERFAMILY SSF53927 4 146 5.83E-49 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BD65_2805 cc6a3aca013f293a20d446520234ae5a 369 Gene3D G3DSA:3.40.430.10 137 368 1.0E-72 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BD65_2805 cc6a3aca013f293a20d446520234ae5a 369 PIRSF PIRSF006769 1 368 7.2E-128 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BD65_2805 cc6a3aca013f293a20d446520234ae5a 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 100 2.9E-20 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BD65_2805 cc6a3aca013f293a20d446520234ae5a 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BD65_2805 cc6a3aca013f293a20d446520234ae5a 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 366 8.4E-69 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 BD65_2805 cc6a3aca013f293a20d446520234ae5a 369 Gene3D G3DSA:3.40.140.10 1 136 2.2E-46 T 14-10-2018 BD65_2805 cc6a3aca013f293a20d446520234ae5a 369 Pfam PF01872 RibD C-terminal domain 148 361 1.2E-54 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BD65_1019 56d9ee80022c81ec45af5791b1e9347b 300 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 130 1.8E-27 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BD65_1019 56d9ee80022c81ec45af5791b1e9347b 300 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 294 1.4E-92 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase BD65_1019 56d9ee80022c81ec45af5791b1e9347b 300 Gene3D G3DSA:2.60.200.40 127 285 1.7E-88 T 14-10-2018 BD65_1019 56d9ee80022c81ec45af5791b1e9347b 300 SMART SM00046 6 135 6.1E-18 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BD65_1019 56d9ee80022c81ec45af5791b1e9347b 300 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 6 300 45.174 T 14-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 BD65_1019 56d9ee80022c81ec45af5791b1e9347b 300 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 299 3.0E-140 T 14-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 BD65_1019 56d9ee80022c81ec45af5791b1e9347b 300 SUPERFAMILY SSF111331 8 296 1.92E-67 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BD65_1019 56d9ee80022c81ec45af5791b1e9347b 300 Gene3D G3DSA:3.40.50.10330 25 288 1.7E-88 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BD65_2823 856cb1feeaf69fa2d3273cc831ae3d9c 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 5.0E-40 T 14-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 BD65_2823 856cb1feeaf69fa2d3273cc831ae3d9c 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 1.9E-18 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 BD65_279 d9a9b970bd42922db012e886f43c7d0d 211 Pfam PF03922 OmpW family 23 211 3.2E-67 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 BD65_279 d9a9b970bd42922db012e886f43c7d0d 211 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 203 211 - T 14-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 BD65_279 d9a9b970bd42922db012e886f43c7d0d 211 SUPERFAMILY SSF56925 23 211 1.39E-28 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BD65_279 d9a9b970bd42922db012e886f43c7d0d 211 Gene3D G3DSA:2.40.160.20 22 211 3.8E-78 T 14-10-2018 BD65_2840 96763ed002054c20648f9f43407121ea 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 361 1.1E-17 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BD65_2840 96763ed002054c20648f9f43407121ea 567 SUPERFAMILY SSF53850 114 563 1.12E-53 T 14-10-2018 BD65_2840 96763ed002054c20648f9f43407121ea 567 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 1.3E-37 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BD65_2840 96763ed002054c20648f9f43407121ea 567 Gene3D G3DSA:3.40.190.10 116 311 1.3E-24 T 14-10-2018 BD65_776 20284d988b496466a09abd615a941df3 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 395 9.2E-143 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_776 20284d988b496466a09abd615a941df3 414 PIRSF PIRSF006060 5 305 5.4E-10 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_776 20284d988b496466a09abd615a941df3 414 PIRSF PIRSF006060 312 412 25.0 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_776 20284d988b496466a09abd615a941df3 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 2.2E-97 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_776 20284d988b496466a09abd615a941df3 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 2.2E-97 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_776 20284d988b496466a09abd615a941df3 414 PRINTS PR00166 Aromatic amino acid permease signature 19 42 2.2E-97 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_776 20284d988b496466a09abd615a941df3 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 2.2E-97 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_776 20284d988b496466a09abd615a941df3 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 2.2E-97 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_776 20284d988b496466a09abd615a941df3 414 PRINTS PR00166 Aromatic amino acid permease signature 91 111 2.2E-97 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_776 20284d988b496466a09abd615a941df3 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 2.2E-97 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_776 20284d988b496466a09abd615a941df3 414 PRINTS PR00166 Aromatic amino acid permease signature 46 65 2.2E-97 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_776 20284d988b496466a09abd615a941df3 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 2.2E-97 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BD65_776 20284d988b496466a09abd615a941df3 414 Pfam PF03222 Tryptophan/tyrosine permease family 11 402 3.8E-139 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 BD65_1852 f20e343c961fd3d3c8b7bdd64595c3b0 202 Pfam PF07305 Protein of unknown function (DUF1454) 18 201 1.8E-79 T 14-10-2018 IPR009918 Protein of unknown function DUF1454 BD65_168 b174dd0e4d0f4e90cfd367035b11a701 544 PIRSF PIRSF029745 25 544 3.9E-107 T 14-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 BD65_168 b174dd0e4d0f4e90cfd367035b11a701 544 Gene3D G3DSA:2.40.160.50 165 544 1.6E-67 T 14-10-2018 BD65_168 b174dd0e4d0f4e90cfd367035b11a701 544 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 193 505 2.8E-81 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal BD65_168 b174dd0e4d0f4e90cfd367035b11a701 544 Pfam PF17287 POTRA domain 138 188 1.9E-12 T 14-10-2018 IPR035251 ShlB, POTRA domain BD65_168 b174dd0e4d0f4e90cfd367035b11a701 544 Pfam PF08479 POTRA domain, ShlB-type 64 136 6.2E-9 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type BD65_168 b174dd0e4d0f4e90cfd367035b11a701 544 Gene3D G3DSA:3.10.20.310 64 139 1.2E-7 T 14-10-2018 BD65_1288 e6f75e8d0d57e4fdde9c143ae05dad79 205 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 38.697 T 14-10-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 BD65_1288 e6f75e8d0d57e4fdde9c143ae05dad79 205 Pfam PF01810 LysE type translocator 14 201 5.1E-50 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BD65_1288 e6f75e8d0d57e4fdde9c143ae05dad79 205 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 5.4E-65 T 14-10-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 BD65_453 cf1b0b33511d0e89f15720b3cc01a211 346 Pfam PF03734 L,D-transpeptidase catalytic domain 101 235 1.1E-19 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BD65_453 cf1b0b33511d0e89f15720b3cc01a211 346 Gene3D G3DSA:2.40.440.10 23 306 4.2E-85 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BD65_453 cf1b0b33511d0e89f15720b3cc01a211 346 SUPERFAMILY SSF141523 97 235 1.03E-29 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BD65_131 2fe39edee4fbb512411f098eedfb6af8 190 Gene3D G3DSA:2.60.120.10 9 150 6.6E-40 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_131 2fe39edee4fbb512411f098eedfb6af8 190 Gene3D G3DSA:2.60.120.10 12 114 6.6E-40 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_131 2fe39edee4fbb512411f098eedfb6af8 190 SUPERFAMILY SSF51182 1 187 6.85E-55 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BD65_131 2fe39edee4fbb512411f098eedfb6af8 190 Pfam PF05962 HutD 9 163 1.3E-51 T 14-10-2018 IPR010282 Uncharacterised protein family HutD/Ves BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 Gene3D G3DSA:3.40.50.2300 69 323 2.8E-100 T 14-10-2018 BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 Gene3D G3DSA:3.40.50.2300 162 324 2.8E-100 T 14-10-2018 BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 2.8E-40 T 14-10-2018 BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 SUPERFAMILY SSF47413 1 59 3.16E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 SUPERFAMILY SSF53822 60 340 1.85E-94 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 63.033 T 14-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 SMART SM00354 1 71 3.9E-36 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.4E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_442 ec55c50033ba48bf77b27c8b1c87bbf1 341 Gene3D G3DSA:1.10.260.40 3 59 5.8E-25 T 14-10-2018 BD65_1756 5313fcccb7b39cd0c4e98738ce734828 850 Pfam PF12633 Adenylate cyclase NT domain 5 200 1.3E-80 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 BD65_1756 5313fcccb7b39cd0c4e98738ce734828 850 Pfam PF01295 Adenylate cyclase, class-I 228 825 7.2E-263 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 BD65_1756 5313fcccb7b39cd0c4e98738ce734828 850 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 14-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 BD65_1756 5313fcccb7b39cd0c4e98738ce734828 850 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 14-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 BD65_1756 5313fcccb7b39cd0c4e98738ce734828 850 PIRSF PIRSF001444 1 850 0.0 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 BD65_834 92d3b5ff1c5591cecf5808805abde986 170 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 3.0E-36 T 14-10-2018 IPR009476 Protein of unknown function DUF1097 BD65_189 19358086860e8bd3c94c2625482b83c9 320 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 1.2E-131 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 BD65_189 19358086860e8bd3c94c2625482b83c9 320 PIRSF PIRSF026649 11 315 2.4E-90 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BD65_189 19358086860e8bd3c94c2625482b83c9 320 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 53.405 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 BD65_189 19358086860e8bd3c94c2625482b83c9 320 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 306 7.8E-91 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BD65_2667 edd788bfdf5094cd0d88986d6492a4e1 368 Gene3D G3DSA:1.10.150.630 150 239 6.6E-20 T 14-10-2018 BD65_2667 edd788bfdf5094cd0d88986d6492a4e1 368 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 25 252 2.5E-37 T 14-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 BD65_2667 edd788bfdf5094cd0d88986d6492a4e1 368 Pfam PF07201 HrpJ-like domain 44 201 1.8E-32 T 14-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 BD65_2667 edd788bfdf5094cd0d88986d6492a4e1 368 SUPERFAMILY SSF140591 57 249 7.06E-44 T 14-10-2018 BD65_2643 7b89c123250c727592e593e6dcc53da5 366 Gene3D G3DSA:3.40.50.2000 180 337 2.5E-24 T 14-10-2018 BD65_2643 7b89c123250c727592e593e6dcc53da5 366 SUPERFAMILY SSF53756 51 332 8.9E-37 T 14-10-2018 BD65_2643 7b89c123250c727592e593e6dcc53da5 366 Pfam PF00534 Glycosyl transferases group 1 188 333 1.3E-17 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BD65_531 34c3542a2dcb405567e36efd6c158d60 117 PIRSF PIRSF020555 1 117 3.4E-44 T 14-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats BD65_531 34c3542a2dcb405567e36efd6c158d60 117 Pfam PF16068 Domain of unknown function (DUF4810) 26 109 4.1E-33 T 14-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats BD65_531 34c3542a2dcb405567e36efd6c158d60 117 Gene3D G3DSA:1.25.40.10 23 110 2.0E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_210 bdce106c1b340bbe57839a9824918b5e 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.936 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB BD65_210 bdce106c1b340bbe57839a9824918b5e 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 1.4E-46 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 BD65_210 bdce106c1b340bbe57839a9824918b5e 176 SUPERFAMILY SSF158442 15 161 1.03E-47 T 14-10-2018 IPR023380 DsbB-like superfamily BD65_210 bdce106c1b340bbe57839a9824918b5e 176 Gene3D G3DSA:1.20.1550.10 1 176 2.2E-70 T 14-10-2018 IPR023380 DsbB-like superfamily BD65_949 2768c3c7e25b76d2e60cd80c27d7fdba 293 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BD65_949 2768c3c7e25b76d2e60cd80c27d7fdba 293 SUPERFAMILY SSF53686 4 290 1.83E-91 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BD65_949 2768c3c7e25b76d2e60cd80c27d7fdba 293 Gene3D G3DSA:3.40.50.1100 35 140 4.1E-113 T 14-10-2018 BD65_949 2768c3c7e25b76d2e60cd80c27d7fdba 293 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 5.4E-123 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BD65_949 2768c3c7e25b76d2e60cd80c27d7fdba 293 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 1.8E-152 T 14-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BD65_949 2768c3c7e25b76d2e60cd80c27d7fdba 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 2.3E-67 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BD65_949 2768c3c7e25b76d2e60cd80c27d7fdba 293 Gene3D G3DSA:3.40.50.1100 8 288 4.1E-113 T 14-10-2018 BD65_1558 6ff869c0a581d396f4815b3bfedb0e30 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.68 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BD65_1558 6ff869c0a581d396f4815b3bfedb0e30 293 PIRSF PIRSF000401 1 293 4.8E-92 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BD65_1558 6ff869c0a581d396f4815b3bfedb0e30 293 SUPERFAMILY SSF53335 43 289 3.52E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1558 6ff869c0a581d396f4815b3bfedb0e30 293 Gene3D G3DSA:3.40.50.150 101 293 1.5E-57 T 14-10-2018 BD65_1558 6ff869c0a581d396f4815b3bfedb0e30 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 2.6E-118 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BD65_1558 6ff869c0a581d396f4815b3bfedb0e30 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.2E-101 T 14-10-2018 BD65_1795 ab3c309a9d2571da3ad2c09a9fa15063 275 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 272 52.151 T 14-10-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 BD65_1795 ab3c309a9d2571da3ad2c09a9fa15063 275 SUPERFAMILY SSF46785 2 80 1.4E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1795 ab3c309a9d2571da3ad2c09a9fa15063 275 Pfam PF03466 LysR substrate binding domain 88 267 4.7E-18 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1795 ab3c309a9d2571da3ad2c09a9fa15063 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1795 ab3c309a9d2571da3ad2c09a9fa15063 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1795 ab3c309a9d2571da3ad2c09a9fa15063 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1795 ab3c309a9d2571da3ad2c09a9fa15063 275 SUPERFAMILY SSF53850 90 269 2.64E-19 T 14-10-2018 BD65_1795 ab3c309a9d2571da3ad2c09a9fa15063 275 Gene3D G3DSA:3.40.190.10 83 178 1.1E-8 T 14-10-2018 BD65_1795 ab3c309a9d2571da3ad2c09a9fa15063 275 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1795 ab3c309a9d2571da3ad2c09a9fa15063 275 Gene3D G3DSA:1.10.10.10 1 82 6.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2932 2a5757419b066f332b913f291c6e7317 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BD65_2932 2a5757419b066f332b913f291c6e7317 269 SUPERFAMILY SSF51735 1 258 9.0E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2932 2a5757419b066f332b913f291c6e7317 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 7.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2932 2a5757419b066f332b913f291c6e7317 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 7.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2932 2a5757419b066f332b913f291c6e7317 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 7.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2932 2a5757419b066f332b913f291c6e7317 269 Gene3D G3DSA:3.40.50.720 1 261 1.7E-53 T 14-10-2018 BD65_2932 2a5757419b066f332b913f291c6e7317 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2932 2a5757419b066f332b913f291c6e7317 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2932 2a5757419b066f332b913f291c6e7317 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2932 2a5757419b066f332b913f291c6e7317 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2932 2a5757419b066f332b913f291c6e7317 269 Pfam PF00106 short chain dehydrogenase 8 190 8.9E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 Gene3D G3DSA:1.20.1640.10 13 507 2.7E-245 T 14-10-2018 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 Gene3D G3DSA:3.30.70.1430 559 657 2.7E-245 T 14-10-2018 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 SUPERFAMILY SSF82693 559 628 6.28E-6 T 14-10-2018 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 SUPERFAMILY SSF82693 136 326 1.52E-22 T 14-10-2018 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 SUPERFAMILY SSF82866 795 1013 5.23E-46 T 14-10-2018 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 Gene3D G3DSA:3.30.70.1440 658 859 2.7E-245 T 14-10-2018 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 Gene3D G3DSA:3.30.70.1320 136 328 2.7E-245 T 14-10-2018 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 5.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 5.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 5.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 SUPERFAMILY SSF82714 722 792 5.75E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 SUPERFAMILY SSF82693 40 135 2.09E-19 T 14-10-2018 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 Pfam PF00873 AcrB/AcrD/AcrF family 6 1012 7.6E-159 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 Gene3D G3DSA:3.30.2090.10 709 799 2.7E-245 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 Gene3D G3DSA:3.30.70.1430 40 807 2.7E-245 T 14-10-2018 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 Gene3D G3DSA:1.20.1640.10 508 1010 2.7E-245 T 14-10-2018 BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 Gene3D G3DSA:3.30.2090.10 179 271 2.7E-245 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 SUPERFAMILY SSF82714 184 266 1.57E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BD65_2455 9db07d0cf01e53dee03cf5e997f6102f 1024 SUPERFAMILY SSF82866 293 489 9.16E-37 T 14-10-2018 BD65_802 a9dc2046f37e52f64a5b43c64ca43baf 330 SUPERFAMILY SSF56281 72 292 3.93E-35 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_802 a9dc2046f37e52f64a5b43c64ca43baf 330 PIRSF PIRSF038896 2 327 9.0E-99 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 BD65_802 a9dc2046f37e52f64a5b43c64ca43baf 330 Gene3D G3DSA:3.60.15.10 52 328 5.3E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_802 a9dc2046f37e52f64a5b43c64ca43baf 330 Pfam PF12706 Beta-lactamase superfamily domain 88 286 1.6E-39 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_2102 dee698ae36fe8614a86809fbda3e04dc 247 SUPERFAMILY SSF53335 5 246 7.56E-75 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2102 dee698ae36fe8614a86809fbda3e04dc 247 Gene3D G3DSA:3.40.50.150 57 247 1.6E-74 T 14-10-2018 BD65_2102 dee698ae36fe8614a86809fbda3e04dc 247 Gene3D G3DSA:3.40.1630.10 1 56 5.8E-28 T 14-10-2018 BD65_2102 dee698ae36fe8614a86809fbda3e04dc 247 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 1.4E-108 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 BD65_2102 dee698ae36fe8614a86809fbda3e04dc 247 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 247 36.86 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 BD65_862 34b26d6a342037b5ec2e92bd71cd8ba3 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 160 5.6E-24 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 BD65_862 34b26d6a342037b5ec2e92bd71cd8ba3 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 14-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site BD65_862 34b26d6a342037b5ec2e92bd71cd8ba3 183 SUPERFAMILY SSF56300 1 163 1.28E-37 T 14-10-2018 BD65_862 34b26d6a342037b5ec2e92bd71cd8ba3 183 Gene3D G3DSA:3.60.21.10 1 183 7.1E-69 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BD65_862 34b26d6a342037b5ec2e92bd71cd8ba3 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 167 4.7E-39 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.3E-32 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 Gene3D G3DSA:3.10.20.70 2 104 7.6E-42 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 Gene3D G3DSA:3.30.590.10 105 457 1.3E-148 T 14-10-2018 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 SUPERFAMILY SSF55931 102 468 1.28E-136 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.2E-136 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 SUPERFAMILY SSF54368 3 100 2.88E-36 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 SMART SM01230 102 379 4.0E-147 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.0E-213 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BD65_1950 fa9a899008e5a60e20d2483faec714d5 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 SUPERFAMILY SSF103025 3 277 7.22E-92 T 14-10-2018 BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 Gene3D G3DSA:3.30.1360.120 6 231 6.8E-88 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 2.0E-17 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 Gene3D G3DSA:2.40.30.110 277 365 4.8E-33 T 14-10-2018 BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 SUPERFAMILY SSF101790 270 360 2.94E-24 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.838 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 2.7E-82 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 Gene3D G3DSA:3.30.70.1400 51 138 6.8E-88 T 14-10-2018 BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 Gene3D G3DSA:4.10.1250.10 232 276 1.1E-26 T 14-10-2018 BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 PIRSF PIRSF006487 1 363 8.3E-80 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BD65_1277 695f03b38812b0a32d7ab1e33b6548c8 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 358 1.7E-152 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BD65_2174 a5bd636a8bcbed8275861c11ca1339b6 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 3.5E-47 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BD65_2174 a5bd636a8bcbed8275861c11ca1339b6 189 SUPERFAMILY SSF50891 27 188 1.1E-56 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BD65_2174 a5bd636a8bcbed8275861c11ca1339b6 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BD65_2174 a5bd636a8bcbed8275861c11ca1339b6 189 Gene3D G3DSA:2.40.100.10 25 189 6.9E-69 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BD65_2174 a5bd636a8bcbed8275861c11ca1339b6 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 9.9E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BD65_2174 a5bd636a8bcbed8275861c11ca1339b6 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 9.9E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BD65_2174 a5bd636a8bcbed8275861c11ca1339b6 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 9.9E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BD65_2174 a5bd636a8bcbed8275861c11ca1339b6 189 PIRSF PIRSF001467 13 187 5.8E-28 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SUPERFAMILY SSF47384 757 837 2.94E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Gene3D G3DSA:3.30.450.20 517 644 5.0E-32 T 14-10-2018 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Gene3D G3DSA:3.30.450.20 374 516 1.1E-36 T 14-10-2018 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SUPERFAMILY SSF52172 1170 1292 7.12E-38 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Gene3D G3DSA:1.10.287.130 756 836 3.4E-26 T 14-10-2018 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Pfam PF01627 Hpt domain 1340 1415 1.0E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00086 451 493 1.1E-8 T 14-10-2018 IPR001610 PAC motif BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00086 709 750 0.83 T 14-10-2018 IPR001610 PAC motif BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00086 579 621 1.2E-7 T 14-10-2018 IPR001610 PAC motif BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SUPERFAMILY SSF55874 824 994 4.19E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Gene3D G3DSA:3.30.450.350 94 297 1.1E-26 T 14-10-2018 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SUPERFAMILY SSF55785 641 753 1.33E-11 T 14-10-2018 IPR035965 PAS domain superfamily BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Gene3D G3DSA:3.30.450.20 645 755 1.3E-14 T 14-10-2018 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00073 1329 1430 0.0067 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00091 505 573 0.0013 T 14-10-2018 IPR000014 PAS domain BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00091 378 445 2.0E-7 T 14-10-2018 IPR000014 PAS domain BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00091 633 703 89.0 T 14-10-2018 IPR000014 PAS domain BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SUPERFAMILY SSF55785 516 618 2.97E-26 T 14-10-2018 IPR035965 PAS domain superfamily BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Gene3D G3DSA:3.30.565.10 837 1000 5.2E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SUPERFAMILY SSF52172 1021 1150 7.26E-24 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Pfam PF03924 CHASE domain 93 277 3.8E-43 T 14-10-2018 IPR006189 CHASE domain BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SUPERFAMILY SSF47226 1270 1416 2.36E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Pfam PF13426 PAS domain 518 620 1.1E-14 T 14-10-2018 IPR000014 PAS domain BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Pfam PF13426 PAS domain 389 492 1.7E-17 T 14-10-2018 IPR000014 PAS domain BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SUPERFAMILY SSF55785 386 493 3.84E-25 T 14-10-2018 IPR035965 PAS domain superfamily BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Pfam PF00512 His Kinase A (phospho-acceptor) domain 770 835 2.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 882 996 1.1E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Gene3D G3DSA:1.20.120.160 1318 1431 1.0E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM01079 90 282 1.3E-50 T 14-10-2018 IPR006189 CHASE domain BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Gene3D G3DSA:3.40.50.2300 1017 1157 3.9E-25 T 14-10-2018 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Gene3D G3DSA:3.40.50.2300 1160 1297 7.8E-41 T 14-10-2018 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00387 882 998 4.7E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 941 951 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 982 995 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 923 937 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 958 976 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00448 1172 1287 3.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00448 1024 1145 2.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Pfam PF00072 Response regulator receiver domain 1026 1144 9.2E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Pfam PF00072 Response regulator receiver domain 1175 1287 8.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 Pfam PF08447 PAS fold 671 744 5.9E-10 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 377 500 9.7E-21 T 14-10-2018 IPR000014 PAS domain BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 519 627 7.2E-17 T 14-10-2018 IPR000014 PAS domain BD65_2948 f0cd00e379d468c6af243a27f90d4891 1522 SMART SM00388 770 835 1.7E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_1914 1ac977c4c045b627b027ddf7031977ce 355 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 317 9.9E-82 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 BD65_1914 1ac977c4c045b627b027ddf7031977ce 355 Gene3D G3DSA:3.40.50.2000 1 151 3.5E-60 T 14-10-2018 BD65_1914 1ac977c4c045b627b027ddf7031977ce 355 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 341 8.1E-164 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 BD65_1914 1ac977c4c045b627b027ddf7031977ce 355 SUPERFAMILY SSF53756 1 345 7.14E-101 T 14-10-2018 BD65_1914 1ac977c4c045b627b027ddf7031977ce 355 Gene3D G3DSA:3.40.50.2000 163 346 1.5E-64 T 14-10-2018 BD65_1128 b4404f2f8df3e851c813a43d1d4c6590 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 BD65_1128 b4404f2f8df3e851c813a43d1d4c6590 381 Gene3D G3DSA:3.20.20.70 3 380 5.1E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1128 b4404f2f8df3e851c813a43d1d4c6590 381 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.441 T 14-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 BD65_1128 b4404f2f8df3e851c813a43d1d4c6590 381 PIRSF PIRSF000138 2 379 7.6E-123 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 BD65_1128 b4404f2f8df3e851c813a43d1d4c6590 381 Pfam PF01070 FMN-dependent dehydrogenase 13 374 4.8E-128 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 BD65_1128 b4404f2f8df3e851c813a43d1d4c6590 381 SUPERFAMILY SSF51395 7 371 1.22E-99 T 14-10-2018 BD65_858 3542c290117c24c52ee41551904eaa69 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 8.8E-37 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BD65_858 3542c290117c24c52ee41551904eaa69 147 Gene3D G3DSA:3.40.930.10 1 147 1.0E-58 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BD65_858 3542c290117c24c52ee41551904eaa69 147 SUPERFAMILY SSF55804 1 145 2.62E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BD65_2454 05ab72ba57b133170234f4a78a20c83b 360 Gene3D G3DSA:1.10.287.470 90 149 1.5E-72 T 14-10-2018 BD65_2454 05ab72ba57b133170234f4a78a20c83b 360 Gene3D G3DSA:2.40.420.20 34 350 1.5E-72 T 14-10-2018 BD65_2454 05ab72ba57b133170234f4a78a20c83b 360 SUPERFAMILY SSF111369 48 245 2.62E-24 T 14-10-2018 BD65_2454 05ab72ba57b133170234f4a78a20c83b 360 Gene3D G3DSA:2.40.30.170 41 268 1.5E-72 T 14-10-2018 BD65_2454 05ab72ba57b133170234f4a78a20c83b 360 Gene3D G3DSA:2.40.50.100 56 188 1.5E-72 T 14-10-2018 BD65_2454 05ab72ba57b133170234f4a78a20c83b 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 354 1.1E-89 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BD65_2454 05ab72ba57b133170234f4a78a20c83b 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 243 1.9E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BD65_3085 36666b680c903f358e15275031fdc323 81 Gene3D G3DSA:3.10.20.30 1 81 9.1E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_3085 36666b680c903f358e15275031fdc323 81 SUPERFAMILY SSF54285 1 81 4.67E-24 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BD65_3085 36666b680c903f358e15275031fdc323 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.3E-24 T 14-10-2018 BD65_3085 36666b680c903f358e15275031fdc323 81 Pfam PF02597 ThiS family 4 81 3.6E-22 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BD65_786 95cf023af81cff343b07b74ec7fdb2fd 365 SUPERFAMILY SSF161098 132 346 6.28E-16 T 14-10-2018 IPR035906 MetI-like superfamily BD65_786 95cf023af81cff343b07b74ec7fdb2fd 365 Gene3D G3DSA:1.10.3720.10 122 354 5.6E-19 T 14-10-2018 IPR035906 MetI-like superfamily BD65_786 95cf023af81cff343b07b74ec7fdb2fd 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 8.7E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1065 184bb4d5bc0116313120b2969c9cb062 540 Gene3D G3DSA:3.40.50.620 261 539 1.0E-112 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_1065 184bb4d5bc0116313120b2969c9cb062 540 SUPERFAMILY SSF56317 4 242 1.7E-63 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BD65_1065 184bb4d5bc0116313120b2969c9cb062 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 243 3.0E-27 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BD65_1065 184bb4d5bc0116313120b2969c9cb062 540 PIRSF PIRSF006630 2 539 9.8E-201 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BD65_1065 184bb4d5bc0116313120b2969c9cb062 540 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 537 28.462 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BD65_1065 184bb4d5bc0116313120b2969c9cb062 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 263 511 1.3E-58 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 BD65_1065 184bb4d5bc0116313120b2969c9cb062 540 Gene3D G3DSA:3.60.110.10 1 254 6.7E-89 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BD65_1065 184bb4d5bc0116313120b2969c9cb062 540 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 BD65_1065 184bb4d5bc0116313120b2969c9cb062 540 Pfam PF02540 NAD synthase 264 511 4.1E-71 T 14-10-2018 IPR022310 NAD/GMP synthase BD65_1065 184bb4d5bc0116313120b2969c9cb062 540 SUPERFAMILY SSF52402 258 520 6.52E-79 T 14-10-2018 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 1.1E-177 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 40.982 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 SUPERFAMILY SSF55681 116 425 1.24E-96 T 14-10-2018 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 Gene3D G3DSA:1.10.287.40 1 104 1.7E-19 T 14-10-2018 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 PIRSF PIRSF001529 1 430 1.4E-179 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 Gene3D G3DSA:3.30.930.10 105 430 4.9E-113 T 14-10-2018 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 229 406 2.1E-35 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 7.3E-30 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 2.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 2.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 2.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 2.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 2.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BD65_3233 ead16b94fa5d223ef21e3ba58c0410b0 431 SUPERFAMILY SSF46589 1 112 2.14E-30 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BD65_2272 fe5dac06cd58811fd37dd32500ec59d3 803 Pfam PF13954 PapC N-terminal domain 24 161 1.2E-36 T 14-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 BD65_2272 fe5dac06cd58811fd37dd32500ec59d3 803 Gene3D G3DSA:3.10.20.410 22 138 1.6E-24 T 14-10-2018 BD65_2272 fe5dac06cd58811fd37dd32500ec59d3 803 Gene3D G3DSA:2.60.40.2610 635 723 6.8E-11 T 14-10-2018 BD65_2272 fe5dac06cd58811fd37dd32500ec59d3 803 Gene3D G3DSA:2.60.40.3110 250 338 1.3E-31 T 14-10-2018 BD65_2272 fe5dac06cd58811fd37dd32500ec59d3 803 Pfam PF00577 Outer membrane usher protein 181 718 1.6E-164 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BD65_2272 fe5dac06cd58811fd37dd32500ec59d3 803 Pfam PF13953 PapC C-terminal domain 728 785 7.1E-15 T 14-10-2018 IPR025949 PapC-like, C-terminal domain BD65_2272 fe5dac06cd58811fd37dd32500ec59d3 803 Gene3D G3DSA:2.60.40.2070 728 802 4.8E-15 T 14-10-2018 BD65_2272 fe5dac06cd58811fd37dd32500ec59d3 803 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 292 302 - T 14-10-2018 IPR018030 Fimbrial membrane usher, conserved site BD65_2272 fe5dac06cd58811fd37dd32500ec59d3 803 SUPERFAMILY SSF141729 23 137 2.88E-26 T 14-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 BD65_1478 d347ea2a2aedcafa6ce22235541d3364 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1478 d347ea2a2aedcafa6ce22235541d3364 298 Gene3D G3DSA:1.10.10.10 6 94 4.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1478 d347ea2a2aedcafa6ce22235541d3364 298 SUPERFAMILY SSF46785 8 91 1.36E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1478 d347ea2a2aedcafa6ce22235541d3364 298 SUPERFAMILY SSF53850 93 288 1.04E-21 T 14-10-2018 BD65_1478 d347ea2a2aedcafa6ce22235541d3364 298 Gene3D G3DSA:3.40.190.290 112 288 9.1E-13 T 14-10-2018 BD65_1478 d347ea2a2aedcafa6ce22235541d3364 298 Pfam PF03466 LysR substrate binding domain 124 280 1.3E-17 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_2835 e59d218091585fd831da773e54dfe60c 90 Gene3D G3DSA:4.10.520.10 1 90 4.8E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BD65_2835 e59d218091585fd831da773e54dfe60c 90 SUPERFAMILY SSF47729 1 90 1.77E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BD65_2835 e59d218091585fd831da773e54dfe60c 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BD65_2835 e59d218091585fd831da773e54dfe60c 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_2835 e59d218091585fd831da773e54dfe60c 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_2835 e59d218091585fd831da773e54dfe60c 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_2835 e59d218091585fd831da773e54dfe60c 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.7E-32 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_2835 e59d218091585fd831da773e54dfe60c 90 SMART SM00411 1 90 3.7E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 Gene3D G3DSA:2.40.50.140 47 141 7.2E-13 T 14-10-2018 BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 Gene3D G3DSA:3.40.50.300 457 630 1.7E-51 T 14-10-2018 BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 SUPERFAMILY SSF50249 9 174 1.8E-42 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 SUPERFAMILY SSF52540 292 653 3.61E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 3.7E-245 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 Gene3D G3DSA:3.40.50.300 208 450 1.0E-81 T 14-10-2018 BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 SMART SM00490 505 589 1.7E-22 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 Pfam PF00271 Helicase conserved C-terminal domain 481 588 2.0E-17 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 SMART SM00487 265 459 2.7E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 Pfam PF17191 RecG wedge domain 15 172 1.2E-20 T 14-10-2018 IPR033454 RecG, wedge domain BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 Pfam PF00270 DEAD/DEAH box helicase 291 431 2.1E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_1941 4d392c2ef8a12b158832ca9ae3513b51 693 SUPERFAMILY SSF52540 208 453 1.22E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2264 9743ab02a40b7012a8ee202935a86594 547 Gene3D G3DSA:3.30.260.10 136 410 3.8E-239 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BD65_2264 9743ab02a40b7012a8ee202935a86594 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.387 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BD65_2264 9743ab02a40b7012a8ee202935a86594 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.7E-255 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BD65_2264 9743ab02a40b7012a8ee202935a86594 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BD65_2264 9743ab02a40b7012a8ee202935a86594 547 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BD65_2264 9743ab02a40b7012a8ee202935a86594 547 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BD65_2264 9743ab02a40b7012a8ee202935a86594 547 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BD65_2264 9743ab02a40b7012a8ee202935a86594 547 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BD65_2264 9743ab02a40b7012a8ee202935a86594 547 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BD65_2264 9743ab02a40b7012a8ee202935a86594 547 SUPERFAMILY SSF52029 185 376 2.27E-81 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily BD65_2264 9743ab02a40b7012a8ee202935a86594 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.6E-94 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 BD65_2264 9743ab02a40b7012a8ee202935a86594 547 Gene3D G3DSA:1.10.560.10 8 521 3.8E-239 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily BD65_2264 9743ab02a40b7012a8ee202935a86594 547 SUPERFAMILY SSF48592 7 521 2.29E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily BD65_2264 9743ab02a40b7012a8ee202935a86594 547 Gene3D G3DSA:3.50.7.10 192 372 3.8E-239 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily BD65_2264 9743ab02a40b7012a8ee202935a86594 547 SUPERFAMILY SSF54849 137 203 1.24E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BD65_1786 3a8d86647abc88daf72f65c1751d80ae 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1786 3a8d86647abc88daf72f65c1751d80ae 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1786 3a8d86647abc88daf72f65c1751d80ae 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1786 3a8d86647abc88daf72f65c1751d80ae 293 Gene3D G3DSA:3.40.190.10 81 181 2.8E-18 T 14-10-2018 BD65_1786 3a8d86647abc88daf72f65c1751d80ae 293 Pfam PF03466 LysR substrate binding domain 89 293 5.0E-39 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1786 3a8d86647abc88daf72f65c1751d80ae 293 SUPERFAMILY SSF53850 89 293 1.52E-33 T 14-10-2018 BD65_1786 3a8d86647abc88daf72f65c1751d80ae 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.9E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1786 3a8d86647abc88daf72f65c1751d80ae 293 Gene3D G3DSA:3.40.190.10 182 262 1.5E-10 T 14-10-2018 BD65_1786 3a8d86647abc88daf72f65c1751d80ae 293 Gene3D G3DSA:1.10.10.10 1 80 8.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1786 3a8d86647abc88daf72f65c1751d80ae 293 SUPERFAMILY SSF46785 1 111 5.08E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2526 31ce0fe3e2a19d2d215d3eee33746fac 270 PRINTS PR00625 DnaJ domain signature 224 239 4.4E-6 T 14-10-2018 IPR001623 DnaJ domain BD65_2526 31ce0fe3e2a19d2d215d3eee33746fac 270 PRINTS PR00625 DnaJ domain signature 206 224 4.4E-6 T 14-10-2018 IPR001623 DnaJ domain BD65_2526 31ce0fe3e2a19d2d215d3eee33746fac 270 PRINTS PR00625 DnaJ domain signature 248 268 4.4E-6 T 14-10-2018 IPR001623 DnaJ domain BD65_2526 31ce0fe3e2a19d2d215d3eee33746fac 270 Pfam PF00226 DnaJ domain 207 266 2.7E-9 T 14-10-2018 IPR001623 DnaJ domain BD65_2526 31ce0fe3e2a19d2d215d3eee33746fac 270 Pfam PF05099 Tellurite resistance protein TerB 51 171 2.2E-11 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal BD65_2526 31ce0fe3e2a19d2d215d3eee33746fac 270 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 269 39.859 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 BD65_2526 31ce0fe3e2a19d2d215d3eee33746fac 270 SUPERFAMILY SSF46565 132 266 8.58E-29 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BD65_2526 31ce0fe3e2a19d2d215d3eee33746fac 270 Gene3D G3DSA:1.10.3680.10 39 185 3.9E-21 T 14-10-2018 IPR029024 TerB-like BD65_2526 31ce0fe3e2a19d2d215d3eee33746fac 270 SMART SM00271 203 268 1.0E-14 T 14-10-2018 IPR001623 DnaJ domain BD65_2526 31ce0fe3e2a19d2d215d3eee33746fac 270 Gene3D G3DSA:1.10.287.110 189 268 9.2E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 Pfam PF00318 Ribosomal protein S2 9 224 3.0E-94 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.579 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 3.9E-108 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 Gene3D G3DSA:3.40.50.10490 8 219 2.7E-93 T 14-10-2018 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 Gene3D G3DSA:1.10.287.610 103 150 2.7E-93 T 14-10-2018 BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 SUPERFAMILY SSF52313 6 236 6.28E-97 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BD65_1195 e20ca7c9cbc928c066595406a3ff6280 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BD65_608 93ee2563c324f63259befaa21fd89d17 280 Pfam PF12833 Helix-turn-helix domain 195 269 2.6E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_608 93ee2563c324f63259befaa21fd89d17 280 Pfam PF07883 Cupin domain 25 77 7.6E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel BD65_608 93ee2563c324f63259befaa21fd89d17 280 SUPERFAMILY SSF51182 13 91 2.89E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BD65_608 93ee2563c324f63259befaa21fd89d17 280 SUPERFAMILY SSF46689 221 272 2.11E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_608 93ee2563c324f63259befaa21fd89d17 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 3.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_608 93ee2563c324f63259befaa21fd89d17 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 3.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_608 93ee2563c324f63259befaa21fd89d17 280 Gene3D G3DSA:2.60.120.10 4 101 7.6E-10 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_608 93ee2563c324f63259befaa21fd89d17 280 Gene3D G3DSA:1.10.10.60 169 271 4.6E-19 T 14-10-2018 BD65_608 93ee2563c324f63259befaa21fd89d17 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BD65_608 93ee2563c324f63259befaa21fd89d17 280 SMART SM00342 185 268 5.6E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 SUPERFAMILY SSF46600 191 243 4.05E-12 T 14-10-2018 IPR036876 UVR domain superfamily BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 SMART SM00465 17 98 1.0E-23 T 14-10-2018 IPR000305 GIY-YIG endonuclease BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 Gene3D G3DSA:1.10.150.20 555 610 7.5E-23 T 14-10-2018 BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 Pfam PF02151 UvrB/uvrC motif 205 237 6.4E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 5.3E-12 T 14-10-2018 IPR000305 GIY-YIG endonuclease BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 Gene3D G3DSA:3.30.420.340 377 552 5.1E-48 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 542 1.3E-47 T 14-10-2018 IPR001162 UvrC family homology region BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 SUPERFAMILY SSF47781 521 609 2.7E-18 T 14-10-2018 IPR010994 RuvA domain 2-like BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 29.636 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 Gene3D G3DSA:3.40.1440.10 5 102 2.0E-32 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 SUPERFAMILY SSF82771 17 100 1.96E-24 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BD65_648 a542cb9a13c19e4af1f1ca4868b7d1f6 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 589 2.9E-228 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 BD65_253 8dac90aff9acba8e80ef13fa708a2ee7 545 Gene3D G3DSA:3.10.105.10 299 514 2.5E-206 T 14-10-2018 BD65_253 8dac90aff9acba8e80ef13fa708a2ee7 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 6.9E-87 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BD65_253 8dac90aff9acba8e80ef13fa708a2ee7 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 110 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site BD65_253 8dac90aff9acba8e80ef13fa708a2ee7 545 PIRSF PIRSF002741 1 544 4.4E-113 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BD65_253 8dac90aff9acba8e80ef13fa708a2ee7 545 Gene3D G3DSA:3.40.190.10 43 526 2.5E-206 T 14-10-2018 BD65_253 8dac90aff9acba8e80ef13fa708a2ee7 545 Gene3D G3DSA:3.90.76.10 73 196 2.5E-206 T 14-10-2018 BD65_253 8dac90aff9acba8e80ef13fa708a2ee7 545 SUPERFAMILY SSF53850 37 527 2.54E-146 T 14-10-2018 BD65_819 37b7d5260f7d44ddd97ce0fc5a522d7e 167 Pfam PF03974 Ecotin 35 157 7.6E-48 T 14-10-2018 IPR005658 Proteinase inhibitor I11, ecotin BD65_819 37b7d5260f7d44ddd97ce0fc5a522d7e 167 PIRSF PIRSF006865 1 167 1.9E-60 T 14-10-2018 IPR005658 Proteinase inhibitor I11, ecotin BD65_819 37b7d5260f7d44ddd97ce0fc5a522d7e 167 Gene3D G3DSA:2.60.40.550 21 167 1.6E-57 T 14-10-2018 BD65_819 37b7d5260f7d44ddd97ce0fc5a522d7e 167 Hamap MF_00706 Ecotin [eco]. 4 167 35.596 T 14-10-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria BD65_819 37b7d5260f7d44ddd97ce0fc5a522d7e 167 SUPERFAMILY SSF49772 31 166 2.22E-52 T 14-10-2018 IPR036198 Ecotin superfamily BD65_150 5bd4e4ae28812abf10556c6496bb8220 269 Pfam PF13371 Tetratricopeptide repeat 187 258 1.2E-25 T 14-10-2018 BD65_150 5bd4e4ae28812abf10556c6496bb8220 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 8.5E-43 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BD65_150 5bd4e4ae28812abf10556c6496bb8220 269 SUPERFAMILY SSF48452 189 259 3.56E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1293 36d0de3b041405a626e0d23895c31779 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BD65_1293 36d0de3b041405a626e0d23895c31779 664 SMART SM00861 355 525 2.4E-68 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BD65_1293 36d0de3b041405a626e0d23895c31779 664 Gene3D G3DSA:3.40.50.970 1 326 4.9E-136 T 14-10-2018 BD65_1293 36d0de3b041405a626e0d23895c31779 664 Gene3D G3DSA:3.40.50.920 538 664 9.5E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BD65_1293 36d0de3b041405a626e0d23895c31779 664 Pfam PF02779 Transketolase, pyrimidine binding domain 355 524 1.3E-46 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BD65_1293 36d0de3b041405a626e0d23895c31779 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BD65_1293 36d0de3b041405a626e0d23895c31779 664 SUPERFAMILY SSF52518 5 330 1.77E-121 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_1293 36d0de3b041405a626e0d23895c31779 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 2.2E-170 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BD65_1293 36d0de3b041405a626e0d23895c31779 664 SUPERFAMILY SSF52518 332 526 3.17E-70 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_1293 36d0de3b041405a626e0d23895c31779 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 4.9E-19 T 14-10-2018 IPR033248 Transketolase, C-terminal domain BD65_1293 36d0de3b041405a626e0d23895c31779 664 SUPERFAMILY SSF52922 533 664 2.88E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BD65_1293 36d0de3b041405a626e0d23895c31779 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 BD65_1293 36d0de3b041405a626e0d23895c31779 664 Gene3D G3DSA:3.40.50.970 327 537 2.3E-85 T 14-10-2018 BD65_2358 c95d5c4b91b723aff1775ed4515e66bf 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 7.0E-39 T 14-10-2018 BD65_2358 c95d5c4b91b723aff1775ed4515e66bf 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2358 c95d5c4b91b723aff1775ed4515e66bf 89 Gene3D G3DSA:1.10.287.10 2 89 3.8E-37 T 14-10-2018 BD65_2358 c95d5c4b91b723aff1775ed4515e66bf 89 SUPERFAMILY SSF47060 3 89 2.83E-34 T 14-10-2018 IPR009068 S15/NS1, RNA-binding BD65_2358 c95d5c4b91b723aff1775ed4515e66bf 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.962 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2358 c95d5c4b91b723aff1775ed4515e66bf 89 Pfam PF00312 Ribosomal protein S15 8 88 3.3E-37 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2358 c95d5c4b91b723aff1775ed4515e66bf 89 SMART SM01387 8 88 6.3E-51 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2358 c95d5c4b91b723aff1775ed4515e66bf 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.5E-39 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2907 577ea96b1c417042427cf4f4c5c9955f 300 SUPERFAMILY SSF46894 20 103 7.09E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2907 577ea96b1c417042427cf4f4c5c9955f 300 SMART SM00862 27 104 4.2E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2907 577ea96b1c417042427cf4f4c5c9955f 300 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 102 4.2E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2907 577ea96b1c417042427cf4f4c5c9955f 300 Gene3D G3DSA:1.10.10.10 11 107 7.3E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1675 4f9e51be684806065a7b08257383d4a5 443 Gene3D G3DSA:3.40.350.10 1 159 8.1E-61 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BD65_1675 4f9e51be684806065a7b08257383d4a5 443 Pfam PF00557 Metallopeptidase family M24 168 430 3.0E-42 T 14-10-2018 IPR000994 Peptidase M24 BD65_1675 4f9e51be684806065a7b08257383d4a5 443 SUPERFAMILY SSF55920 163 438 3.4E-53 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like BD65_1675 4f9e51be684806065a7b08257383d4a5 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.293 T 14-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 BD65_1675 4f9e51be684806065a7b08257383d4a5 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BD65_1675 4f9e51be684806065a7b08257383d4a5 443 Gene3D G3DSA:3.90.230.10 161 443 3.4E-77 T 14-10-2018 BD65_147 f8b39f697eb1a34062943d6ec196285e 360 Gene3D G3DSA:3.30.160.20 210 297 4.3E-94 T 14-10-2018 BD65_147 f8b39f697eb1a34062943d6ec196285e 360 Pfam PF03462 PCRF domain 12 203 1.7E-76 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 BD65_147 f8b39f697eb1a34062943d6ec196285e 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 3.8E-173 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BD65_147 f8b39f697eb1a34062943d6ec196285e 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.194 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BD65_147 f8b39f697eb1a34062943d6ec196285e 360 Gene3D G3DSA:3.30.70.1660 111 342 4.3E-94 T 14-10-2018 BD65_147 f8b39f697eb1a34062943d6ec196285e 360 Gene3D G3DSA:1.20.58.410 2 101 8.0E-7 T 14-10-2018 BD65_147 f8b39f697eb1a34062943d6ec196285e 360 SMART SM00937 63 178 2.1E-70 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 BD65_147 f8b39f697eb1a34062943d6ec196285e 360 SUPERFAMILY SSF75620 12 353 3.27E-136 T 14-10-2018 BD65_147 f8b39f697eb1a34062943d6ec196285e 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BD65_147 f8b39f697eb1a34062943d6ec196285e 360 Pfam PF00472 RF-1 domain 216 321 1.1E-39 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BD65_3163 166218f40e5da4fd19e1f9330c8df53d 451 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 438 4.0E-177 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 BD65_3163 166218f40e5da4fd19e1f9330c8df53d 451 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 448 2.6E-129 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 BD65_423 2aadff5334596bfee280465d7ffd1e39 201 SUPERFAMILY SSF52833 1 78 2.15E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_423 2aadff5334596bfee280465d7ffd1e39 201 Gene3D G3DSA:1.20.1050.10 82 188 6.5E-77 T 14-10-2018 BD65_423 2aadff5334596bfee280465d7ffd1e39 201 Gene3D G3DSA:3.40.30.10 3 191 6.5E-77 T 14-10-2018 BD65_423 2aadff5334596bfee280465d7ffd1e39 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 6.4E-13 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BD65_423 2aadff5334596bfee280465d7ffd1e39 201 SUPERFAMILY SSF47616 84 195 5.43E-28 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BD65_423 2aadff5334596bfee280465d7ffd1e39 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 7.7E-17 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal BD65_185 23355ce4afc1f327c0682fd3b3cd2fc2 261 Gene3D G3DSA:1.10.3470.10 30 260 1.6E-11 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_185 23355ce4afc1f327c0682fd3b3cd2fc2 261 SUPERFAMILY SSF81345 3 255 1.96E-41 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_185 23355ce4afc1f327c0682fd3b3cd2fc2 261 Pfam PF00950 ABC 3 transport family 1 255 2.2E-85 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 BD65_746 7da6fb9ddb2d4b31c4d7e8a7595aad40 512 SUPERFAMILY SSF55874 385 504 1.24E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_746 7da6fb9ddb2d4b31c4d7e8a7595aad40 512 SMART SM00387 418 507 4.6E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_746 7da6fb9ddb2d4b31c4d7e8a7595aad40 512 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 505 2.9E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_746 7da6fb9ddb2d4b31c4d7e8a7595aad40 512 Pfam PF05231 MASE1 10 280 3.8E-33 T 14-10-2018 IPR007895 MASE1 BD65_746 7da6fb9ddb2d4b31c4d7e8a7595aad40 512 Gene3D G3DSA:3.30.565.10 384 507 2.6E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_746 7da6fb9ddb2d4b31c4d7e8a7595aad40 512 Pfam PF07730 Histidine kinase 315 379 2.2E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 Gene3D G3DSA:2.40.10.220 689 798 4.0E-13 T 14-10-2018 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 Pfam PF07238 PilZ domain 693 789 3.3E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 PRINTS PR01439 Cellulose synthase subunit A signature 198 218 5.0E-59 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 PRINTS PR01439 Cellulose synthase subunit A signature 552 571 5.0E-59 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 PRINTS PR01439 Cellulose synthase subunit A signature 226 251 5.0E-59 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 PRINTS PR01439 Cellulose synthase subunit A signature 362 386 5.0E-59 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 PRINTS PR01439 Cellulose synthase subunit A signature 592 611 5.0E-59 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 PRINTS PR01439 Cellulose synthase subunit A signature 523 549 5.0E-59 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 PRINTS PR01439 Cellulose synthase subunit A signature 666 687 5.0E-59 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 PRINTS PR01439 Cellulose synthase subunit A signature 281 300 5.0E-59 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 Pfam PF00535 Glycosyl transferase family 2 277 445 1.5E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 146 828 7.3E-291 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 Gene3D G3DSA:3.90.550.10 261 482 2.7E-81 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 Pfam PF03552 Cellulose synthase 450 570 1.6E-12 T 14-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 SUPERFAMILY SSF141371 695 789 4.71E-6 T 14-10-2018 BD65_2084 613b81abd3ee50f8d8c7455ad4243eee 871 SUPERFAMILY SSF53448 271 550 4.56E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2149 e0eded73906c13e89cef9286c6a1c2c4 714 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 708 0.0 T 14-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 BD65_2149 e0eded73906c13e89cef9286c6a1c2c4 714 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 1 703 0.0 T 14-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 BD65_1120 4764d7d933c7bd8093dbd1d1fb222de4 545 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 489 1.1E-38 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BD65_1120 4764d7d933c7bd8093dbd1d1fb222de4 545 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 537 7.5E-210 T 14-10-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 BD65_1120 4764d7d933c7bd8093dbd1d1fb222de4 545 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 262 4.2E-30 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BD65_1120 4764d7d933c7bd8093dbd1d1fb222de4 545 Gene3D G3DSA:3.30.420.40 5 513 6.7E-224 T 14-10-2018 BD65_1120 4764d7d933c7bd8093dbd1d1fb222de4 545 SUPERFAMILY SSF53067 280 532 1.61E-53 T 14-10-2018 BD65_1120 4764d7d933c7bd8093dbd1d1fb222de4 545 Gene3D G3DSA:3.30.420.460 323 525 6.7E-224 T 14-10-2018 BD65_1120 4764d7d933c7bd8093dbd1d1fb222de4 545 SUPERFAMILY SSF53067 4 263 2.33E-59 T 14-10-2018 BD65_1120 4764d7d933c7bd8093dbd1d1fb222de4 545 PIRSF PIRSF000538 2 543 5.1E-74 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BD65_1402 59532762836826c57f974813aa829098 582 SMART SM00766 450 575 5.0E-55 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BD65_1402 59532762836826c57f974813aa829098 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 4.0E-150 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 BD65_1402 59532762836826c57f974813aa829098 582 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.243 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BD65_1402 59532762836826c57f974813aa829098 582 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 1.2E-12 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 BD65_1402 59532762836826c57f974813aa829098 582 Gene3D G3DSA:1.10.860.10 434 581 7.8E-53 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BD65_1402 59532762836826c57f974813aa829098 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 7.3E-43 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal BD65_1402 59532762836826c57f974813aa829098 582 SMART SM00400 36 90 9.7E-37 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BD65_1402 59532762836826c57f974813aa829098 582 SUPERFAMILY SSF57783 4 100 1.87E-35 T 14-10-2018 BD65_1402 59532762836826c57f974813aa829098 582 SUPERFAMILY SSF56731 116 427 3.01E-114 T 14-10-2018 BD65_1402 59532762836826c57f974813aa829098 582 Gene3D G3DSA:3.40.1360.10 241 367 1.5E-43 T 14-10-2018 BD65_1402 59532762836826c57f974813aa829098 582 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 7.3E-35 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BD65_1402 59532762836826c57f974813aa829098 582 Gene3D G3DSA:3.90.980.10 115 240 4.8E-47 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BD65_1402 59532762836826c57f974813aa829098 582 Pfam PF01807 CHC2 zinc finger 7 100 1.2E-40 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BD65_1402 59532762836826c57f974813aa829098 582 Gene3D G3DSA:3.90.580.10 1 101 1.2E-37 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 BD65_1402 59532762836826c57f974813aa829098 582 PIRSF PIRSF002811 2 581 2.0E-145 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BD65_1402 59532762836826c57f974813aa829098 582 Pfam PF13155 Toprim-like 263 348 2.5E-14 T 14-10-2018 BD65_1402 59532762836826c57f974813aa829098 582 SUPERFAMILY SSF117023 447 578 5.75E-46 T 14-10-2018 BD65_1402 59532762836826c57f974813aa829098 582 Gene3D G3DSA:1.20.50.20 368 426 1.6E-29 T 14-10-2018 BD65_1402 59532762836826c57f974813aa829098 582 SMART SM00493 259 330 1.1E-21 T 14-10-2018 IPR006171 TOPRIM domain BD65_1846 8f1213f70026b9df9a54298c18db1849 281 ProSitePatterns PS00221 MIP family signature. 68 76 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 BD65_1846 8f1213f70026b9df9a54298c18db1849 281 SUPERFAMILY SSF81338 11 259 9.68E-81 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BD65_1846 8f1213f70026b9df9a54298c18db1849 281 Pfam PF00230 Major intrinsic protein 5 253 1.3E-72 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BD65_1846 8f1213f70026b9df9a54298c18db1849 281 PRINTS PR00783 Major intrinsic protein family signature 87 106 8.5E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BD65_1846 8f1213f70026b9df9a54298c18db1849 281 PRINTS PR00783 Major intrinsic protein family signature 186 208 8.5E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BD65_1846 8f1213f70026b9df9a54298c18db1849 281 PRINTS PR00783 Major intrinsic protein family signature 11 30 8.5E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BD65_1846 8f1213f70026b9df9a54298c18db1849 281 PRINTS PR00783 Major intrinsic protein family signature 50 74 8.5E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BD65_1846 8f1213f70026b9df9a54298c18db1849 281 PRINTS PR00783 Major intrinsic protein family signature 153 171 8.5E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BD65_1846 8f1213f70026b9df9a54298c18db1849 281 PRINTS PR00783 Major intrinsic protein family signature 236 256 8.5E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BD65_1846 8f1213f70026b9df9a54298c18db1849 281 Gene3D G3DSA:1.20.1080.10 4 261 5.5E-109 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BD65_1846 8f1213f70026b9df9a54298c18db1849 281 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 8.9E-74 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 14-10-2018 IPR018215 ClpP, Ser active site BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.33 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 Gene3D G3DSA:3.90.226.10 6 207 2.2E-84 T 14-10-2018 BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 1.2E-109 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 14-10-2018 IPR033135 ClpP, histidine active site BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 Pfam PF00574 Clp protease 25 205 2.3E-89 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 SUPERFAMILY SSF52096 23 206 1.77E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 1.7E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 1.7E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 1.7E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 1.7E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BD65_2832 889891eddfd7ca1cea39af6d7911ca69 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 1.7E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BD65_1028 c3bafac980825e07510cb62700f9907b 496 Gene3D G3DSA:3.40.50.300 2 160 2.5E-43 T 14-10-2018 BD65_1028 c3bafac980825e07510cb62700f9907b 496 SUPERFAMILY SSF52540 4 166 9.0E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1028 c3bafac980825e07510cb62700f9907b 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 465 3.5E-177 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BD65_1028 c3bafac980825e07510cb62700f9907b 496 Pfam PF01926 50S ribosome-binding GTPase 212 329 3.0E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_1028 c3bafac980825e07510cb62700f9907b 496 Pfam PF01926 50S ribosome-binding GTPase 5 119 7.8E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_1028 c3bafac980825e07510cb62700f9907b 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 465 2.7E-25 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like BD65_1028 c3bafac980825e07510cb62700f9907b 496 Hamap MF_00195 GTPase Der [der]. 2 468 38.754 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BD65_1028 c3bafac980825e07510cb62700f9907b 496 PIRSF PIRSF006485 1 473 9.5E-178 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BD65_1028 c3bafac980825e07510cb62700f9907b 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 9.2E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_1028 c3bafac980825e07510cb62700f9907b 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 210 373 1.7E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_1028 c3bafac980825e07510cb62700f9907b 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.9E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_1028 c3bafac980825e07510cb62700f9907b 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 3.9E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_1028 c3bafac980825e07510cb62700f9907b 496 SUPERFAMILY SSF52540 137 471 3.72E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1028 c3bafac980825e07510cb62700f9907b 496 Gene3D G3DSA:3.40.50.300 207 382 1.5E-47 T 14-10-2018 BD65_1028 c3bafac980825e07510cb62700f9907b 496 Gene3D G3DSA:3.30.300.20 385 467 1.6E-19 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BD65_2237 9977cffc6be6018e6b1db97b2c51db9c 136 SUPERFAMILY SSF81330 12 127 3.01E-35 T 14-10-2018 IPR036019 Gated mechanosensitive channel BD65_2237 9977cffc6be6018e6b1db97b2c51db9c 136 Gene3D G3DSA:1.10.1200.120 3 134 1.1E-42 T 14-10-2018 IPR036019 Gated mechanosensitive channel BD65_2237 9977cffc6be6018e6b1db97b2c51db9c 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site BD65_2237 9977cffc6be6018e6b1db97b2c51db9c 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 4.7E-54 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BD65_2237 9977cffc6be6018e6b1db97b2c51db9c 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 4.4E-12 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BD65_2237 9977cffc6be6018e6b1db97b2c51db9c 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 4.4E-12 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BD65_2237 9977cffc6be6018e6b1db97b2c51db9c 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 4.4E-12 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BD65_2237 9977cffc6be6018e6b1db97b2c51db9c 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 1.6E-45 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L BD65_2237 9977cffc6be6018e6b1db97b2c51db9c 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 24.165 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BD65_1207 3605380c28287d6003d882aa6514f801 367 Gene3D G3DSA:3.30.2300.20 80 175 5.4E-38 T 14-10-2018 BD65_1207 3605380c28287d6003d882aa6514f801 367 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 86.115 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 BD65_1207 3605380c28287d6003d882aa6514f801 367 Gene3D G3DSA:3.40.50.150 176 357 7.2E-57 T 14-10-2018 BD65_1207 3605380c28287d6003d882aa6514f801 367 Gene3D G3DSA:3.30.70.2810 1 79 3.2E-35 T 14-10-2018 BD65_1207 3605380c28287d6003d882aa6514f801 367 SUPERFAMILY SSF53335 184 293 1.52E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1207 3605380c28287d6003d882aa6514f801 367 PIRSF PIRSF028774 1 360 4.4E-191 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 BD65_1207 3605380c28287d6003d882aa6514f801 367 Pfam PF01728 FtsJ-like methyltransferase 186 262 7.6E-8 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BD65_1884 801912ec64faed4ab4d10b7d501355bc 308 Pfam PF07804 HipA-like C-terminal domain 21 211 1.3E-8 T 14-10-2018 IPR012893 HipA-like, C-terminal BD65_1884 801912ec64faed4ab4d10b7d501355bc 308 Gene3D G3DSA:1.10.1070.20 113 306 1.0E-19 T 14-10-2018 BD65_659 25d725cb14a27364b8789c2c1df86297 251 SMART SM00382 28 221 1.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_659 25d725cb14a27364b8789c2c1df86297 251 Gene3D G3DSA:3.40.50.300 1 250 8.5E-83 T 14-10-2018 BD65_659 25d725cb14a27364b8789c2c1df86297 251 SUPERFAMILY SSF52540 4 243 1.23E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_659 25d725cb14a27364b8789c2c1df86297 251 PIRSF PIRSF039085 1 249 1.2E-110 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BD65_659 25d725cb14a27364b8789c2c1df86297 251 Pfam PF00005 ABC transporter 19 173 1.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_659 25d725cb14a27364b8789c2c1df86297 251 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2976 fac4c47a421349dc2051f405a7de4860 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 3.1E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BD65_2976 fac4c47a421349dc2051f405a7de4860 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 237 1.2E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_2976 fac4c47a421349dc2051f405a7de4860 246 SUPERFAMILY SSF161098 24 223 4.71E-37 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2976 fac4c47a421349dc2051f405a7de4860 246 Gene3D G3DSA:1.10.3720.10 18 238 7.9E-44 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2663 6a6faabb8e68897e149c0751e4f3d347 104 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 41 103 7.3E-11 T 14-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 BD65_2663 6a6faabb8e68897e149c0751e4f3d347 104 Gene3D G3DSA:1.20.58.90 30 98 3.6E-12 T 14-10-2018 BD65_2663 6a6faabb8e68897e149c0751e4f3d347 104 SUPERFAMILY SSF140129 37 98 3.4E-10 T 14-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.8E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 Gene3D G3DSA:3.90.1170.10 1 136 3.0E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 SUPERFAMILY SSF54686 3 133 6.28E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.726 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.1E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.1E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.1E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.1E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2215 8ce505b1ed17dfaa41c34a5c027fc8d1 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.6E-59 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_219 8cd61d984a2cea122a748a2fd36476e5 294 Gene3D G3DSA:3.40.190.10 164 269 1.1E-54 T 14-10-2018 BD65_219 8cd61d984a2cea122a748a2fd36476e5 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.3E-24 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_219 8cd61d984a2cea122a748a2fd36476e5 294 SUPERFAMILY SSF46785 1 85 1.69E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_219 8cd61d984a2cea122a748a2fd36476e5 294 SUPERFAMILY SSF53850 88 293 1.54E-33 T 14-10-2018 BD65_219 8cd61d984a2cea122a748a2fd36476e5 294 Gene3D G3DSA:1.10.10.10 1 91 1.1E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_219 8cd61d984a2cea122a748a2fd36476e5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_219 8cd61d984a2cea122a748a2fd36476e5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_219 8cd61d984a2cea122a748a2fd36476e5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_219 8cd61d984a2cea122a748a2fd36476e5 294 Pfam PF03466 LysR substrate binding domain 87 293 1.9E-38 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_219 8cd61d984a2cea122a748a2fd36476e5 294 Gene3D G3DSA:3.40.190.10 92 287 1.1E-54 T 14-10-2018 BD65_2494 fb69fd581657b72810ce77beed03f938 429 Gene3D G3DSA:3.90.1380.10 1 81 2.3E-35 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily BD65_2494 fb69fd581657b72810ce77beed03f938 429 Gene3D G3DSA:3.40.50.1100 85 394 3.0E-140 T 14-10-2018 BD65_2494 fb69fd581657b72810ce77beed03f938 429 TIGRFAM TIGR00260 thrC: threonine synthase 52 395 4.0E-120 T 14-10-2018 IPR004450 Threonine synthase-like BD65_2494 fb69fd581657b72810ce77beed03f938 429 Gene3D G3DSA:3.40.50.1100 103 401 3.0E-140 T 14-10-2018 BD65_2494 fb69fd581657b72810ce77beed03f938 429 Pfam PF14821 Threonine synthase N terminus 8 80 6.2E-11 T 14-10-2018 IPR029144 Threonine synthase, N-terminal BD65_2494 fb69fd581657b72810ce77beed03f938 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 370 9.2E-24 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BD65_2494 fb69fd581657b72810ce77beed03f938 429 SUPERFAMILY SSF53686 1 426 2.62E-131 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BD65_2494 fb69fd581657b72810ce77beed03f938 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BD65_708 5aeddac2cc4155407cd2e6ad184cd2f0 213 Gene3D G3DSA:1.10.287.500 35 168 5.4E-52 T 14-10-2018 BD65_708 5aeddac2cc4155407cd2e6ad184cd2f0 213 Gene3D G3DSA:1.20.5.590 6 34 4.5E-11 T 14-10-2018 BD65_708 5aeddac2cc4155407cd2e6ad184cd2f0 213 SUPERFAMILY SSF75708 13 212 5.49E-66 T 14-10-2018 BD65_708 5aeddac2cc4155407cd2e6ad184cd2f0 213 PIRSF PIRSF002884 1 213 8.3E-87 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BD65_708 5aeddac2cc4155407cd2e6ad184cd2f0 213 Pfam PF04344 Chemotaxis phosphatase, CheZ 16 213 1.5E-76 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BD65_433 5506fbcfce0bb5a31d8423eceadc20a5 545 SUPERFAMILY SSF53649 237 530 1.89E-19 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BD65_433 5506fbcfce0bb5a31d8423eceadc20a5 545 Gene3D G3DSA:3.40.720.10 224 545 1.5E-86 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BD65_433 5506fbcfce0bb5a31d8423eceadc20a5 545 Pfam PF00884 Sulfatase 237 526 4.9E-46 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BD65_433 5506fbcfce0bb5a31d8423eceadc20a5 545 Pfam PF08019 Domain of unknown function (DUF1705) 56 208 1.3E-50 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 BD65_571 721bce591717096c7d2c612f55c8ffe1 251 SUPERFAMILY SSF53474 5 233 5.98E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_571 721bce591717096c7d2c612f55c8ffe1 251 Gene3D G3DSA:3.40.50.1820 4 240 1.5E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_571 721bce591717096c7d2c612f55c8ffe1 251 Pfam PF00975 Thioesterase domain 10 228 1.2E-24 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BD65_2475 2b37df4ec7e5411d58b9659ae0ebbdd3 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 52.716 T 14-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 BD65_2475 2b37df4ec7e5411d58b9659ae0ebbdd3 259 SMART SM01133 10 246 2.9E-76 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BD65_2475 2b37df4ec7e5411d58b9659ae0ebbdd3 259 PIRSF PIRSF001357 5 255 9.3E-78 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BD65_2475 2b37df4ec7e5411d58b9659ae0ebbdd3 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 2.3E-78 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BD65_2475 2b37df4ec7e5411d58b9659ae0ebbdd3 259 Pfam PF01791 DeoC/LacD family aldolase 12 243 3.6E-45 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BD65_2475 2b37df4ec7e5411d58b9659ae0ebbdd3 259 Gene3D G3DSA:3.20.20.70 1 259 1.4E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2475 2b37df4ec7e5411d58b9659ae0ebbdd3 259 SUPERFAMILY SSF51569 5 246 1.78E-80 T 14-10-2018 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 532 1.4E-69 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 Pfam PF14849 YidC periplasmic domain 61 342 2.4E-90 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 Gene3D G3DSA:2.70.98.90 56 332 2.2E-109 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 534 26.721 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 Pfam PF02096 60Kd inner membrane protein 353 532 2.1E-60 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 351 3.5E-119 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 1.3E-29 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR01900 YidC translocation/secretion protein signature 487 511 1.3E-29 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 1.3E-29 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR00701 60kDa inner membrane protein signature 414 437 1.8E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR00701 60kDa inner membrane protein signature 461 483 1.8E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR00701 60kDa inner membrane protein signature 498 521 1.8E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR00701 60kDa inner membrane protein signature 250 265 1.8E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.8E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR00701 60kDa inner membrane protein signature 323 343 1.8E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR00701 60kDa inner membrane protein signature 158 178 1.8E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR00701 60kDa inner membrane protein signature 217 235 1.8E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_2013 9bb55ca1e02ead30de8a89b850945bc3 546 PRINTS PR00701 60kDa inner membrane protein signature 66 87 1.8E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BD65_895 fc74f949ae9f860aef80f5716d0fe4a6 275 SUPERFAMILY SSF55166 21 271 1.02E-98 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BD65_895 fc74f949ae9f860aef80f5716d0fe4a6 275 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 269 7.4E-96 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 BD65_895 fc74f949ae9f860aef80f5716d0fe4a6 275 PIRSF PIRSF018455 1 275 2.5E-116 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 BD65_895 fc74f949ae9f860aef80f5716d0fe4a6 275 Gene3D G3DSA:3.30.1380.10 20 273 1.2E-100 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BD65_1280 c04f132fd179a1f12f88289f2bc80973 437 SMART SM01011 1 136 1.4E-57 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 BD65_1280 c04f132fd179a1f12f88289f2bc80973 437 Gene3D G3DSA:3.40.350.10 1 171 2.5E-63 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BD65_1280 c04f132fd179a1f12f88289f2bc80973 437 Gene3D G3DSA:3.90.230.10 172 437 2.3E-104 T 14-10-2018 BD65_1280 c04f132fd179a1f12f88289f2bc80973 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 125 1.1E-35 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 BD65_1280 c04f132fd179a1f12f88289f2bc80973 437 SUPERFAMILY SSF53092 1 174 2.59E-53 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BD65_1280 c04f132fd179a1f12f88289f2bc80973 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 371 383 4.5E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BD65_1280 c04f132fd179a1f12f88289f2bc80973 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 4.5E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BD65_1280 c04f132fd179a1f12f88289f2bc80973 437 SUPERFAMILY SSF55920 175 434 2.36E-85 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like BD65_1280 c04f132fd179a1f12f88289f2bc80973 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BD65_1280 c04f132fd179a1f12f88289f2bc80973 437 Pfam PF00557 Metallopeptidase family M24 181 412 1.8E-64 T 14-10-2018 IPR000994 Peptidase M24 BD65_2124 3a4eb9a3cedef1dd9aabaae4d9e0782b 278 Gene3D G3DSA:1.20.1540.10 92 271 7.6E-60 T 14-10-2018 IPR035952 Rhomboid-like superfamily BD65_2124 3a4eb9a3cedef1dd9aabaae4d9e0782b 278 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 275 47.689 T 14-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 BD65_2124 3a4eb9a3cedef1dd9aabaae4d9e0782b 278 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 271 1.2E-119 T 14-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 BD65_2124 3a4eb9a3cedef1dd9aabaae4d9e0782b 278 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 83 1.7E-25 T 14-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 BD65_2124 3a4eb9a3cedef1dd9aabaae4d9e0782b 278 Gene3D G3DSA:3.30.70.2350 1 68 4.8E-20 T 14-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily BD65_2124 3a4eb9a3cedef1dd9aabaae4d9e0782b 278 Pfam PF01694 Rhomboid family 132 271 2.3E-28 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BD65_2124 3a4eb9a3cedef1dd9aabaae4d9e0782b 278 SUPERFAMILY SSF144091 94 271 2.49E-43 T 14-10-2018 BD65_753 2d298950cd31024450bd432d018b6e68 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 25.684 T 14-10-2018 IPR007458 Protein of unknown function DUF496 BD65_753 2d298950cd31024450bd432d018b6e68 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 3.0E-42 T 14-10-2018 IPR007458 Protein of unknown function DUF496 BD65_753 2d298950cd31024450bd432d018b6e68 105 PIRSF PIRSF028773 1 105 1.4E-50 T 14-10-2018 IPR007458 Protein of unknown function DUF496 BD65_753 2d298950cd31024450bd432d018b6e68 105 Pfam PF04363 Protein of unknown function (DUF496) 9 100 6.3E-47 T 14-10-2018 IPR007458 Protein of unknown function DUF496 BD65_2145 9faeadcf72dfa1c1350852b254edcbeb 539 SUPERFAMILY SSF68923 8 226 1.52E-91 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BD65_2145 9faeadcf72dfa1c1350852b254edcbeb 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 489 5.4E-212 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BD65_2145 9faeadcf72dfa1c1350852b254edcbeb 539 SUPERFAMILY SSF53795 228 539 4.35E-128 T 14-10-2018 BD65_2145 9faeadcf72dfa1c1350852b254edcbeb 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BD65_2145 9faeadcf72dfa1c1350852b254edcbeb 539 Gene3D G3DSA:2.170.8.10 46 349 3.4E-238 T 14-10-2018 BD65_2145 9faeadcf72dfa1c1350852b254edcbeb 539 Gene3D G3DSA:3.90.228.20 234 524 3.4E-238 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BD65_2145 9faeadcf72dfa1c1350852b254edcbeb 539 Gene3D G3DSA:3.40.449.10 22 233 3.4E-238 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BD65_2145 9faeadcf72dfa1c1350852b254edcbeb 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 9.1E-284 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BD65_2145 9faeadcf72dfa1c1350852b254edcbeb 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 54.93 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BD65_2145 9faeadcf72dfa1c1350852b254edcbeb 539 PIRSF PIRSF006294 3 539 2.2E-230 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BD65_283 04bba417d976c2b2a0d57607bc865b3c 455 Gene3D G3DSA:3.20.20.70 9 256 1.2E-180 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_283 04bba417d976c2b2a0d57607bc865b3c 455 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 252 7.5E-97 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BD65_283 04bba417d976c2b2a0d57607bc865b3c 455 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 258 450 4.8E-53 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BD65_283 04bba417d976c2b2a0d57607bc865b3c 455 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 BD65_283 04bba417d976c2b2a0d57607bc865b3c 455 Gene3D G3DSA:3.20.20.70 257 449 1.2E-180 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_283 04bba417d976c2b2a0d57607bc865b3c 455 SUPERFAMILY SSF51366 4 252 5.06E-81 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BD65_283 04bba417d976c2b2a0d57607bc865b3c 455 SUPERFAMILY SSF51366 258 453 5.65E-55 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BD65_283 04bba417d976c2b2a0d57607bc865b3c 455 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 255 34.937 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BD65_283 04bba417d976c2b2a0d57607bc865b3c 455 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 256 455 31.462 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BD65_1968 b45302eccaa850e5700665a16e7034c9 308 PRINTS PR00990 Ribokinase signature 35 54 2.2E-37 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BD65_1968 b45302eccaa850e5700665a16e7034c9 308 PRINTS PR00990 Ribokinase signature 175 190 2.2E-37 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BD65_1968 b45302eccaa850e5700665a16e7034c9 308 PRINTS PR00990 Ribokinase signature 8 29 2.2E-37 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BD65_1968 b45302eccaa850e5700665a16e7034c9 308 PRINTS PR00990 Ribokinase signature 219 230 2.2E-37 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BD65_1968 b45302eccaa850e5700665a16e7034c9 308 PRINTS PR00990 Ribokinase signature 107 120 2.2E-37 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BD65_1968 b45302eccaa850e5700665a16e7034c9 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BD65_1968 b45302eccaa850e5700665a16e7034c9 308 SUPERFAMILY SSF53613 5 304 4.21E-84 T 14-10-2018 IPR029056 Ribokinase-like BD65_1968 b45302eccaa850e5700665a16e7034c9 308 Hamap MF_01987 Ribokinase [rbsK]. 4 303 26.338 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BD65_1968 b45302eccaa850e5700665a16e7034c9 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 3.0E-112 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BD65_1968 b45302eccaa850e5700665a16e7034c9 308 Pfam PF00294 pfkB family carbohydrate kinase 5 296 1.7E-77 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BD65_1968 b45302eccaa850e5700665a16e7034c9 308 Gene3D G3DSA:3.40.1190.20 3 302 8.0E-103 T 14-10-2018 IPR029056 Ribokinase-like BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 Gene3D G3DSA:3.30.565.10 1 215 4.1E-78 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 Gene3D G3DSA:3.30.230.80 227 399 6.1E-71 T 14-10-2018 BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 SUPERFAMILY SSF54211 227 483 2.88E-99 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 PRINTS PR00775 90kDa heat shock protein signature 120 142 5.6E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 PRINTS PR00775 90kDa heat shock protein signature 26 48 5.6E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 PRINTS PR00775 90kDa heat shock protein signature 75 92 5.6E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 PRINTS PR00775 90kDa heat shock protein signature 93 110 5.6E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 PRINTS PR00775 90kDa heat shock protein signature 172 189 5.6E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 PRINTS PR00775 90kDa heat shock protein signature 5 25 5.6E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 PRINTS PR00775 90kDa heat shock protein signature 190 208 5.6E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 SUPERFAMILY SSF110942 508 621 2.22E-34 T 14-10-2018 IPR037196 HSP90, C-terminal domain BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 Gene3D G3DSA:1.20.120.790 491 622 1.1E-45 T 14-10-2018 IPR037196 HSP90, C-terminal domain BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 PIRSF PIRSF002583 1 622 1.6E-214 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 621 32.699 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 Pfam PF00183 Hsp90 protein 212 621 3.0E-124 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 Gene3D G3DSA:3.40.50.11260 400 490 9.1E-35 T 14-10-2018 BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 1.3E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 SMART SM00387 27 184 4.8E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 BD65_2871 0659b4ab9b3a6c58da51b911fb52f03f 622 SUPERFAMILY SSF55874 4 211 4.32E-65 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2401 8f4b19d40278981b9c2e4bd92633d50f 398 TIGRFAM TIGR03187 DGQHR: DGQHR domain 8 334 4.5E-56 T 14-10-2018 IPR017601 DGQHR-containing domain BD65_2401 8f4b19d40278981b9c2e4bd92633d50f 398 Pfam PF14072 DNA-sulfur modification-associated 7 345 1.1E-14 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Gene3D G3DSA:1.10.730.10 8 791 0.0 T 14-10-2018 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.4E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.4E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.4E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.4E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.4E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.4E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.4E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Gene3D G3DSA:3.40.50.620 33 566 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Gene3D G3DSA:3.10.20.590 799 860 3.8E-25 T 14-10-2018 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 571 9.1E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 1.4E-25 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 2.8E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 SUPERFAMILY SSF52374 5 668 1.69E-139 T 14-10-2018 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.28 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 824 4.8E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 SUPERFAMILY SSF47323 662 859 4.67E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Gene3D G3DSA:3.10.330.110 567 628 0.0 T 14-10-2018 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 SUPERFAMILY SSF50677 226 415 5.65E-57 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BD65_2972 4ac7bc2811eca15d5037e9fab0ab4e49 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 8.2E-78 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 BD65_1281 cef68a1461899909063ec0cad55f1011 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 15 166 7.0E-12 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 BD65_1281 cef68a1461899909063ec0cad55f1011 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 37.114 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 BD65_1281 cef68a1461899909063ec0cad55f1011 192 SUPERFAMILY SSF101327 8 176 1.7E-51 T 14-10-2018 IPR036255 YgfB-like superfamily BD65_1281 cef68a1461899909063ec0cad55f1011 192 Gene3D G3DSA:1.20.120.740 5 192 3.4E-58 T 14-10-2018 BD65_1281 cef68a1461899909063ec0cad55f1011 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 177 7.1E-36 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 BD65_3158 51bbf571c29406a176550268bafe033e 370 SUPERFAMILY SSF52540 109 356 1.28E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3158 51bbf571c29406a176550268bafe033e 370 Gene3D G3DSA:3.40.50.300 96 349 3.2E-78 T 14-10-2018 BD65_3158 51bbf571c29406a176550268bafe033e 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 BD65_3158 51bbf571c29406a176550268bafe033e 370 SUPERFAMILY SSF117916 14 85 5.89E-5 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BD65_3158 51bbf571c29406a176550268bafe033e 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 36.501 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein BD65_3158 51bbf571c29406a176550268bafe033e 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 5.1E-98 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BD65_2002 f3aef4441afae8f10167964de5a91476 245 Gene3D G3DSA:1.10.3720.10 6 242 3.2E-45 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2002 f3aef4441afae8f10167964de5a91476 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 229 6.1E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_2002 f3aef4441afae8f10167964de5a91476 245 SUPERFAMILY SSF161098 18 226 1.96E-38 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2002 f3aef4441afae8f10167964de5a91476 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 18 84 3.2E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 3.9E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 SUPERFAMILY SSF54980 398 512 1.1E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 Gene3D G3DSA:3.30.70.870 306 590 1.5E-127 T 14-10-2018 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 Gene3D G3DSA:3.40.50.300 1 198 1.6E-68 T 14-10-2018 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 Gene3D G3DSA:2.40.50.250 483 599 1.5E-127 T 14-10-2018 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 SUPERFAMILY SSF52540 3 219 2.13E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 Gene3D G3DSA:2.40.30.10 199 299 1.2E-35 T 14-10-2018 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 1.2E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 2.4E-288 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 SUPERFAMILY SSF54980 302 387 1.58E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 Pfam PF00679 Elongation factor G C-terminus 396 476 1.1E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 Gene3D G3DSA:3.30.70.240 389 482 1.5E-127 T 14-10-2018 BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 SUPERFAMILY SSF50447 151 299 3.53E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_1949 97ddb60be6cd75f51ddbc0693fd605c1 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 2.1E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BD65_1177 1637a708b305058a4eff6302aa1c7f5d 289 Gene3D G3DSA:3.90.210.10 32 280 1.2E-37 T 14-10-2018 BD65_1177 1637a708b305058a4eff6302aa1c7f5d 289 Pfam PF02917 Pertussis toxin, subunit 1 31 210 8.3E-6 T 14-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 BD65_1177 1637a708b305058a4eff6302aa1c7f5d 289 SUPERFAMILY SSF56399 31 223 7.91E-18 T 14-10-2018 BD65_2696 89f56031481e2c6cdc40fef9f3913fda 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 6.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_2696 89f56031481e2c6cdc40fef9f3913fda 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 16 41 4.8E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BD65_2696 89f56031481e2c6cdc40fef9f3913fda 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 52 70 4.8E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BD65_2696 89f56031481e2c6cdc40fef9f3913fda 155 Gene3D G3DSA:3.30.700.10 30 145 2.5E-38 T 14-10-2018 BD65_2696 89f56031481e2c6cdc40fef9f3913fda 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_2696 89f56031481e2c6cdc40fef9f3913fda 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 35 2.5E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_2696 89f56031481e2c6cdc40fef9f3913fda 155 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 16 146 6.7E-55 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 BD65_2696 89f56031481e2c6cdc40fef9f3913fda 155 SUPERFAMILY SSF54523 42 145 8.89E-38 T 14-10-2018 BD65_2696 89f56031481e2c6cdc40fef9f3913fda 155 Pfam PF08334 Type II secretion system (T2SS), protein G 40 145 3.3E-36 T 14-10-2018 IPR013545 Type II secretion system protein G BD65_90 d47d82c1890ebebb797a2ee6be2a8929 417 SUPERFAMILY SSF53659 4 417 6.91E-148 T 14-10-2018 BD65_90 d47d82c1890ebebb797a2ee6be2a8929 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 4.8E-235 T 14-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BD65_90 d47d82c1890ebebb797a2ee6be2a8929 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 1.8E-116 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BD65_90 d47d82c1890ebebb797a2ee6be2a8929 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BD65_90 d47d82c1890ebebb797a2ee6be2a8929 417 SMART SM01329 29 413 7.6E-180 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BD65_90 d47d82c1890ebebb797a2ee6be2a8929 417 Gene3D G3DSA:3.40.718.10 1 417 7.7E-187 T 14-10-2018 BD65_2613 d5bc21f42f3976fa8e7af3f8e352bf83 505 Gene3D G3DSA:1.10.3210.10 149 257 7.7E-15 T 14-10-2018 BD65_2613 d5bc21f42f3976fa8e7af3f8e352bf83 505 Gene3D G3DSA:1.10.3210.10 1 148 3.8E-43 T 14-10-2018 BD65_2613 d5bc21f42f3976fa8e7af3f8e352bf83 505 Gene3D G3DSA:1.10.3410.10 260 390 6.0E-21 T 14-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 BD65_2613 d5bc21f42f3976fa8e7af3f8e352bf83 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 503 1.2E-123 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 BD65_2613 d5bc21f42f3976fa8e7af3f8e352bf83 505 Pfam PF13286 Phosphohydrolase-associated domain 468 500 1.1E-5 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain BD65_2613 d5bc21f42f3976fa8e7af3f8e352bf83 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 505 51.832 T 14-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 BD65_2613 d5bc21f42f3976fa8e7af3f8e352bf83 505 SMART SM00471 62 282 7.3E-11 T 14-10-2018 IPR003607 HD/PDEase domain BD65_2613 d5bc21f42f3976fa8e7af3f8e352bf83 505 Pfam PF01966 HD domain 66 134 3.3E-10 T 14-10-2018 IPR006674 HD domain BD65_2613 d5bc21f42f3976fa8e7af3f8e352bf83 505 SUPERFAMILY SSF109604 23 502 3.38E-62 T 14-10-2018 BD65_1204 4dd0efc03157867f7e6864853258297a 281 Gene3D G3DSA:3.30.1130.10 21 139 2.2E-44 T 14-10-2018 BD65_1204 4dd0efc03157867f7e6864853258297a 281 PIRSF PIRSF004750 6 281 3.3E-125 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BD65_1204 4dd0efc03157867f7e6864853258297a 281 Gene3D G3DSA:3.30.1130.10 144 281 3.1E-59 T 14-10-2018 BD65_1204 4dd0efc03157867f7e6864853258297a 281 SUPERFAMILY SSF55620 185 268 4.74E-9 T 14-10-2018 BD65_1204 4dd0efc03157867f7e6864853258297a 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 1.0E-48 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BD65_1204 4dd0efc03157867f7e6864853258297a 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 163.476 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BD65_1204 4dd0efc03157867f7e6864853258297a 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 9.1E-127 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BD65_1204 4dd0efc03157867f7e6864853258297a 281 Pfam PF14489 QueF-like protein 195 269 2.6E-26 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BD65_1732 4e4ac182f986132bbcfa7a20a53b2228 391 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 24 390 3.1E-211 T 14-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 BD65_1732 4e4ac182f986132bbcfa7a20a53b2228 391 Gene3D G3DSA:1.10.1060.10 42 92 2.3E-5 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_1732 4e4ac182f986132bbcfa7a20a53b2228 391 Pfam PF02754 Cysteine-rich domain 158 244 3.6E-14 T 14-10-2018 IPR004017 Cysteine-rich domain BD65_1732 4e4ac182f986132bbcfa7a20a53b2228 391 Pfam PF02754 Cysteine-rich domain 288 371 4.2E-14 T 14-10-2018 IPR004017 Cysteine-rich domain BD65_1732 4e4ac182f986132bbcfa7a20a53b2228 391 SUPERFAMILY SSF46548 32 76 3.84E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_1732 4e4ac182f986132bbcfa7a20a53b2228 391 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_3119 7b9780af1da90f706026023e3936b73c 318 SUPERFAMILY SSF47648 7 71 1.11E-14 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_3119 7b9780af1da90f706026023e3936b73c 318 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 68 5.0E-10 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_3119 7b9780af1da90f706026023e3936b73c 318 Pfam PF00591 Glycosyl transferase family, a/b domain 94 230 1.7E-5 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_3119 7b9780af1da90f706026023e3936b73c 318 SUPERFAMILY SSF52418 80 315 9.42E-44 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_3119 7b9780af1da90f706026023e3936b73c 318 Gene3D G3DSA:3.40.1030.10 73 317 2.1E-96 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_3119 7b9780af1da90f706026023e3936b73c 318 Gene3D G3DSA:1.20.970.10 1 72 1.3E-31 T 14-10-2018 BD65_3023 a64465ca3fd580cad20da4e7f0620900 243 Pfam PF06149 Protein of unknown function (DUF969) 7 224 2.1E-88 T 14-10-2018 IPR010374 Protein of unknown function DUF969 BD65_2994 31b7e613ee1f2586feb797ff25d8e820 406 Gene3D G3DSA:1.10.10.10 5 81 2.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2994 31b7e613ee1f2586feb797ff25d8e820 406 Pfam PF00480 ROK family 88 392 3.5E-91 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_2994 31b7e613ee1f2586feb797ff25d8e820 406 Gene3D G3DSA:3.30.420.40 93 386 1.2E-90 T 14-10-2018 BD65_2994 31b7e613ee1f2586feb797ff25d8e820 406 SUPERFAMILY SSF46785 14 79 2.2E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2994 31b7e613ee1f2586feb797ff25d8e820 406 Pfam PF01047 MarR family 25 63 3.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_2994 31b7e613ee1f2586feb797ff25d8e820 406 Gene3D G3DSA:3.30.420.40 210 378 1.2E-90 T 14-10-2018 BD65_2994 31b7e613ee1f2586feb797ff25d8e820 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_2994 31b7e613ee1f2586feb797ff25d8e820 406 SUPERFAMILY SSF53067 88 394 3.37E-57 T 14-10-2018 BD65_258 b34f6636d33a06625e81fc19e30a19d1 107 SUPERFAMILY SSF102816 1 107 5.49E-51 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily BD65_258 b34f6636d33a06625e81fc19e30a19d1 107 Gene3D G3DSA:3.10.450.140 7 107 3.5E-42 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily BD65_258 b34f6636d33a06625e81fc19e30a19d1 107 PIRSF PIRSF004916 1 107 5.3E-55 T 14-10-2018 IPR007376 dsDNA mimic, putative BD65_258 b34f6636d33a06625e81fc19e30a19d1 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 107 7.0E-51 T 14-10-2018 IPR007376 dsDNA mimic, putative BD65_258 b34f6636d33a06625e81fc19e30a19d1 107 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 107 34.103 T 14-10-2018 IPR007376 dsDNA mimic, putative BD65_258 b34f6636d33a06625e81fc19e30a19d1 107 Pfam PF04269 Protein of unknown function, DUF440 6 107 7.7E-47 T 14-10-2018 IPR007376 dsDNA mimic, putative BD65_2355 af7a83edfa4604343358dbd078f7c286 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 891 1.3E-290 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 SUPERFAMILY SSF50447 792 889 7.66E-35 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 889 17.579 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Gene3D G3DSA:2.40.30.10 793 890 2.9E-34 T 14-10-2018 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Pfam PF00009 Elongation factor Tu GTP binding domain 395 552 2.1E-35 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Gene3D G3DSA:3.40.50.300 389 562 2.2E-72 T 14-10-2018 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 SUPERFAMILY SSF46955 3 50 2.38E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Gene3D G3DSA:3.40.50.10050 685 792 6.1E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BD65_2355 af7a83edfa4604343358dbd078f7c286 892 SUPERFAMILY SSF50447 565 646 3.93E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 94 4.6E-16 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Gene3D G3DSA:3.30.56.50 2 50 5.2E-27 T 14-10-2018 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Gene3D G3DSA:2.40.30.10 563 681 8.5E-40 T 14-10-2018 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 SUPERFAMILY SSF52540 391 559 1.4E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2355 af7a83edfa4604343358dbd078f7c286 892 ProSitePatterns PS01176 Initiation factor 2 signature. 842 864 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Pfam PF03144 Elongation factor Tu domain 2 812 879 1.9E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.0E-7 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 314 364 2.4E-14 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal BD65_2355 af7a83edfa4604343358dbd078f7c286 892 Pfam PF11987 Translation-initiation factor 2 676 781 2.2E-36 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 394 550 2.1E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_2355 af7a83edfa4604343358dbd078f7c286 892 SUPERFAMILY SSF52156 669 798 1.09E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BD65_1098 ffe714f147e7c112099114cdfcb9e44a 553 Gene3D G3DSA:3.40.50.300 295 553 9.5E-51 T 14-10-2018 BD65_1098 ffe714f147e7c112099114cdfcb9e44a 553 PIRSF PIRSF003128 1 553 3.9E-154 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BD65_1098 ffe714f147e7c112099114cdfcb9e44a 553 Gene3D G3DSA:3.40.50.300 1 199 6.9E-43 T 14-10-2018 BD65_1098 ffe714f147e7c112099114cdfcb9e44a 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.2E-166 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BD65_1098 ffe714f147e7c112099114cdfcb9e44a 553 SUPERFAMILY SSF52540 1 511 2.31E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1098 ffe714f147e7c112099114cdfcb9e44a 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 511 1.2E-18 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BD65_104 0792155646fe64cb99fef696eead620f 431 ProSitePatterns PS00543 HlyD family secretion proteins signature. 395 417 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 BD65_104 0792155646fe64cb99fef696eead620f 431 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 240 362 7.6E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BD65_104 0792155646fe64cb99fef696eead620f 431 Gene3D G3DSA:1.10.287.470 182 282 3.5E-13 T 14-10-2018 BD65_104 0792155646fe64cb99fef696eead620f 431 Gene3D G3DSA:1.10.287.470 84 178 1.2E-8 T 14-10-2018 BD65_104 0792155646fe64cb99fef696eead620f 431 Gene3D G3DSA:2.40.30.170 320 408 3.5E-13 T 14-10-2018 BD65_104 0792155646fe64cb99fef696eead620f 431 Gene3D G3DSA:2.40.30.170 38 48 1.2E-8 T 14-10-2018 BD65_104 0792155646fe64cb99fef696eead620f 431 Gene3D G3DSA:2.40.50.100 283 319 3.5E-13 T 14-10-2018 BD65_104 0792155646fe64cb99fef696eead620f 431 Gene3D G3DSA:2.40.50.100 50 83 1.2E-8 T 14-10-2018 BD65_104 0792155646fe64cb99fef696eead620f 431 Pfam PF00529 HlyD membrane-fusion protein of T1SS 22 389 1.2E-18 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BD65_104 0792155646fe64cb99fef696eead620f 431 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 13 431 6.7E-118 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 BD65_104 0792155646fe64cb99fef696eead620f 431 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 395 410 4.5E-65 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_104 0792155646fe64cb99fef696eead620f 431 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 295 316 4.5E-65 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_104 0792155646fe64cb99fef696eead620f 431 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 62 82 4.5E-65 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_104 0792155646fe64cb99fef696eead620f 431 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 20 43 4.5E-65 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_104 0792155646fe64cb99fef696eead620f 431 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 328 352 4.5E-65 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_104 0792155646fe64cb99fef696eead620f 431 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 410 430 4.5E-65 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_104 0792155646fe64cb99fef696eead620f 431 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 352 375 4.5E-65 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.4E-70 T 14-10-2018 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 1.4E-70 T 14-10-2018 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.4E-70 T 14-10-2018 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.4E-70 T 14-10-2018 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.4E-70 T 14-10-2018 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.4E-70 T 14-10-2018 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.4E-70 T 14-10-2018 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.4E-70 T 14-10-2018 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.4E-70 T 14-10-2018 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 Gene3D G3DSA:3.30.565.10 1 220 7.9E-97 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 Gene3D G3DSA:3.40.50.670 707 802 1.4E-25 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 SUPERFAMILY SSF55874 4 220 2.1E-77 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 Pfam PF01751 Toprim domain 419 531 5.2E-18 T 14-10-2018 IPR006171 TOPRIM domain BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 109.744 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 Gene3D G3DSA:3.10.20.690 592 683 1.8E-36 T 14-10-2018 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 7.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 SUPERFAMILY SSF56719 394 795 1.41E-86 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 SUPERFAMILY SSF54211 221 392 4.17E-62 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 Pfam PF00204 DNA gyrase B 221 390 1.6E-59 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.2E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.2E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.2E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.2E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.2E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.2E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.2E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.2E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.2E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.2E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 Gene3D G3DSA:3.30.230.10 221 392 3.1E-75 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 1.2E-29 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 SMART SM00433 35 797 4.5E-280 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 Gene3D G3DSA:3.40.50.670 398 570 2.3E-74 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_2020 12cd3871a9bf678db43dfd7296f69825 804 SMART SM00387 31 175 3.8E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1051 85ae31100920b268ace73b476c158c32 267 Gene3D G3DSA:3.40.190.80 142 267 1.9E-41 T 14-10-2018 BD65_1051 85ae31100920b268ace73b476c158c32 267 Gene3D G3DSA:3.30.540.10 1 140 1.6E-51 T 14-10-2018 BD65_1051 85ae31100920b268ace73b476c158c32 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 8.6E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BD65_1051 85ae31100920b268ace73b476c158c32 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 8.6E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BD65_1051 85ae31100920b268ace73b476c158c32 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 8.6E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BD65_1051 85ae31100920b268ace73b476c158c32 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 8.6E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BD65_1051 85ae31100920b268ace73b476c158c32 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 8.6E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BD65_1051 85ae31100920b268ace73b476c158c32 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 8.6E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BD65_1051 85ae31100920b268ace73b476c158c32 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 9.8E-38 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BD65_1051 85ae31100920b268ace73b476c158c32 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 9.8E-38 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BD65_1051 85ae31100920b268ace73b476c158c32 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 9.8E-38 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BD65_1051 85ae31100920b268ace73b476c158c32 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 9.8E-38 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BD65_1051 85ae31100920b268ace73b476c158c32 267 SUPERFAMILY SSF56655 1 259 1.11E-84 T 14-10-2018 BD65_1051 85ae31100920b268ace73b476c158c32 267 Pfam PF00459 Inositol monophosphatase family 2 255 9.8E-71 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BD65_1051 85ae31100920b268ace73b476c158c32 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site BD65_1051 85ae31100920b268ace73b476c158c32 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 BD65_1225 83619ae81d389ee972831ed1f064087a 165 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_1225 83619ae81d389ee972831ed1f064087a 165 SUPERFAMILY SSF54523 12 158 6.83E-10 T 14-10-2018 BD65_1225 83619ae81d389ee972831ed1f064087a 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 1.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_1225 83619ae81d389ee972831ed1f064087a 165 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 30 2.3E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_767 da4cb1c6dc76e27bc42d706c205b78d0 357 Pfam PF03601 Conserved hypothetical protein 698 21 334 2.0E-108 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 BD65_767 da4cb1c6dc76e27bc42d706c205b78d0 357 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 18 354 1.1E-126 T 14-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 301 6.0E-65 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 SUPERFAMILY SSF54631 341 450 1.39E-19 T 14-10-2018 BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 Gene3D G3DSA:3.10.580.10 335 454 2.5E-19 T 14-10-2018 BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 Pfam PF00571 CBS domain 401 449 1.1E-4 T 14-10-2018 IPR000644 CBS domain BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 Pfam PF00571 CBS domain 344 388 1.4E-5 T 14-10-2018 IPR000644 CBS domain BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 Gene3D G3DSA:3.40.50.1100 9 309 1.9E-109 T 14-10-2018 BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 SMART SM00116 342 389 5.6E-4 T 14-10-2018 IPR000644 CBS domain BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 SMART SM00116 406 451 4.2 T 14-10-2018 IPR000644 CBS domain BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 SUPERFAMILY SSF53686 5 320 4.71E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BD65_3185 a19eeeee3c94f8bf26098e21ac2aea45 455 Gene3D G3DSA:3.40.50.1100 40 153 1.9E-109 T 14-10-2018 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 SUPERFAMILY SSF56300 20 355 1.28E-84 T 14-10-2018 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 Gene3D G3DSA:3.60.21.10 17 356 5.1E-144 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 ProSitePatterns PS00785 5'-nucleotidase signature 1. 26 38 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 ProSitePatterns PS00786 5'-nucleotidase signature 2. 111 122 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 24 649 0.0 T 14-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 Gene3D G3DSA:3.90.780.10 404 592 5.9E-51 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 Pfam PF00149 Calcineurin-like phosphoesterase 26 261 6.6E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 PRINTS PR01607 Apyrase family signature 532 551 3.2E-32 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 PRINTS PR01607 Apyrase family signature 24 42 3.2E-32 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 PRINTS PR01607 Apyrase family signature 430 453 3.2E-32 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 PRINTS PR01607 Apyrase family signature 217 234 3.2E-32 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 PRINTS PR01607 Apyrase family signature 245 268 3.2E-32 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 PRINTS PR01607 Apyrase family signature 285 305 3.2E-32 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 Pfam PF02872 5'-nucleotidase, C-terminal domain 357 552 4.2E-21 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2319 9c6e4426f1a331e6b3f02e89759d14eb 650 SUPERFAMILY SSF55816 357 598 3.27E-39 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 Pfam PF02954 Bacterial regulatory protein, Fis family 287 324 9.0E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 SUPERFAMILY SSF52540 8 248 3.46E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 SMART SM00382 28 171 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 291 308 1.7E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 308 328 1.7E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 Gene3D G3DSA:1.10.10.60 262 329 3.7E-9 T 14-10-2018 BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 Gene3D G3DSA:1.10.8.60 180 261 7.9E-28 T 14-10-2018 BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 325 2.0E-164 T 14-10-2018 IPR014317 Transcription activator PspF BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 Gene3D G3DSA:3.40.50.300 1 179 2.3E-57 T 14-10-2018 BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 SUPERFAMILY SSF46689 222 327 2.06E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_407 8d07484ff1e44352d494ae5404e17ae8 337 Pfam PF00158 Sigma-54 interaction domain 9 170 4.5E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 Gene3D G3DSA:3.30.1360.40 79 156 4.2E-30 T 14-10-2018 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 2.0E-27 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 SUPERFAMILY SSF46785 3 77 8.98E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.2E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.2E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.2E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.2E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 151 5.7E-46 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.999 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.4E-25 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 Gene3D G3DSA:1.10.10.10 1 78 1.1E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 1.8E-21 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BD65_2331 26e3a3ea1623cf5374b761ab355605f9 156 SUPERFAMILY SSF55252 82 151 1.26E-18 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 Gene3D G3DSA:1.10.1650.20 341 394 3.5E-154 T 14-10-2018 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 3.0E-117 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 SUPERFAMILY SSF48168 10 221 1.96E-73 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 Pfam PF03477 ATP cone domain 6 92 1.1E-15 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 Gene3D G3DSA:3.20.70.20 209 732 3.5E-154 T 14-10-2018 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 2.9E-13 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.4E-38 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.4E-38 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.4E-38 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.4E-38 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.4E-38 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.4E-38 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 SUPERFAMILY SSF51998 222 741 6.41E-167 T 14-10-2018 BD65_815 4664970b6455294ba6d6db1c4d29c16a 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.7E-179 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_2615 40841f797995344dae8eba538d005c5c 931 Gene3D G3DSA:1.20.1480.50 164 254 2.0E-8 T 14-10-2018 BD65_2615 40841f797995344dae8eba538d005c5c 931 SUPERFAMILY SSF52172 529 646 1.09E-6 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2615 40841f797995344dae8eba538d005c5c 931 SMART SM00304 199 251 5.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2615 40841f797995344dae8eba538d005c5c 931 Gene3D G3DSA:3.40.50.2300 660 796 8.8E-34 T 14-10-2018 BD65_2615 40841f797995344dae8eba538d005c5c 931 Pfam PF01627 Hpt domain 828 910 2.6E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BD65_2615 40841f797995344dae8eba538d005c5c 931 SMART SM00073 818 914 2.3E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BD65_2615 40841f797995344dae8eba538d005c5c 931 SMART SM00387 403 521 6.5E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2615 40841f797995344dae8eba538d005c5c 931 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 355 8.9E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2615 40841f797995344dae8eba538d005c5c 931 SUPERFAMILY SSF47384 277 357 1.96E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_2615 40841f797995344dae8eba538d005c5c 931 SUPERFAMILY SSF47226 764 909 6.67E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_2615 40841f797995344dae8eba538d005c5c 931 SUPERFAMILY SSF55874 345 515 1.44E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2615 40841f797995344dae8eba538d005c5c 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2615 40841f797995344dae8eba538d005c5c 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2615 40841f797995344dae8eba538d005c5c 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 472 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2615 40841f797995344dae8eba538d005c5c 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2615 40841f797995344dae8eba538d005c5c 931 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 517 2.1E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2615 40841f797995344dae8eba538d005c5c 931 SUPERFAMILY SSF52172 667 796 3.7E-33 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2615 40841f797995344dae8eba538d005c5c 931 Pfam PF00072 Response regulator receiver domain 670 781 5.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2615 40841f797995344dae8eba538d005c5c 931 SMART SM00388 291 356 6.7E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2615 40841f797995344dae8eba538d005c5c 931 SUPERFAMILY SSF158472 199 248 2.09E-5 T 14-10-2018 BD65_2615 40841f797995344dae8eba538d005c5c 931 Gene3D G3DSA:1.10.287.130 255 354 1.9E-28 T 14-10-2018 BD65_2615 40841f797995344dae8eba538d005c5c 931 Gene3D G3DSA:1.20.120.160 807 918 8.5E-27 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_2615 40841f797995344dae8eba538d005c5c 931 SMART SM00448 668 781 1.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2615 40841f797995344dae8eba538d005c5c 931 Gene3D G3DSA:3.30.565.10 357 522 6.9E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2615 40841f797995344dae8eba538d005c5c 931 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 176 5.2E-57 T 14-10-2018 IPR019247 Histidine kinase BarA, N-terminal BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 SUPERFAMILY SSF55890 326 369 3.27E-7 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 531 9.6E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 SUPERFAMILY SSF55874 397 529 6.68E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 1.2E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 1.2E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 1.2E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 SMART SM00387 421 532 2.5E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 Gene3D G3DSA:3.30.450.20 35 166 1.2E-38 T 14-10-2018 BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 Pfam PF17203 Single cache domain 3 50 166 1.3E-18 T 14-10-2018 IPR033463 Single cache domain 3 BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 SUPERFAMILY SSF55785 217 272 2.24E-8 T 14-10-2018 IPR035965 PAS domain superfamily BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 Gene3D G3DSA:3.30.565.10 387 535 5.7E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 SUPERFAMILY SSF103190 41 170 6.67E-32 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 SMART SM00091 215 283 6.5E-7 T 14-10-2018 IPR000014 PAS domain BD65_743 486fac57f500ca4a1f3e6ccc7c7fe24f 536 Gene3D G3DSA:3.30.450.20 201 315 3.5E-14 T 14-10-2018 BD65_2849 81aba4d318a29540a93b29ca4176518d 104 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 7 73 2.0E-15 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BD65_2849 81aba4d318a29540a93b29ca4176518d 104 SUPERFAMILY SSF46767 6 88 2.09E-26 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BD65_2849 81aba4d318a29540a93b29ca4176518d 104 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 8 87 8.2E-27 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BD65_2849 81aba4d318a29540a93b29ca4176518d 104 Gene3D G3DSA:1.10.10.10 5 104 2.8E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1522 6b0f0c151065b6804e3d96c896afa33d 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 6 150 5.0E-65 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 BD65_1522 6b0f0c151065b6804e3d96c896afa33d 153 SUPERFAMILY SSF57825 101 151 6.93E-16 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily BD65_1522 6b0f0c151065b6804e3d96c896afa33d 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 149 2.7E-19 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BD65_1522 6b0f0c151065b6804e3d96c896afa33d 153 SUPERFAMILY SSF54893 2 100 8.5E-35 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily BD65_1522 6b0f0c151065b6804e3d96c896afa33d 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-44 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BD65_1522 6b0f0c151065b6804e3d96c896afa33d 153 Gene3D G3DSA:3.30.70.140 1 100 1.0E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily BD65_1522 6b0f0c151065b6804e3d96c896afa33d 153 Gene3D G3DSA:2.30.30.20 101 153 3.0E-25 T 14-10-2018 BD65_1522 6b0f0c151065b6804e3d96c896afa33d 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 7.4E-30 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BD65_1522 6b0f0c151065b6804e3d96c896afa33d 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.876 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 BD65_3010 3fabd37d2425594adceea9e2c31ca5ac 234 SMART SM00862 151 227 1.4E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_3010 3fabd37d2425594adceea9e2c31ca5ac 234 SMART SM00448 6 116 5.4E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_3010 3fabd37d2425594adceea9e2c31ca5ac 234 Gene3D G3DSA:3.40.50.2300 1 125 7.3E-35 T 14-10-2018 BD65_3010 3fabd37d2425594adceea9e2c31ca5ac 234 Gene3D G3DSA:1.10.10.10 126 232 9.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_3010 3fabd37d2425594adceea9e2c31ca5ac 234 Pfam PF00072 Response regulator receiver domain 8 117 4.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_3010 3fabd37d2425594adceea9e2c31ca5ac 234 SUPERFAMILY SSF52172 4 179 1.76E-38 T 14-10-2018 IPR011006 CheY-like superfamily BD65_3010 3fabd37d2425594adceea9e2c31ca5ac 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 2.9E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_1652 a287f5f0cf50cdb6331fabf79a4e8369 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.604 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1652 a287f5f0cf50cdb6331fabf79a4e8369 121 Gene3D G3DSA:3.30.1390.10 51 121 8.5E-33 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BD65_1652 a287f5f0cf50cdb6331fabf79a4e8369 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 1.0E-17 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1652 a287f5f0cf50cdb6331fabf79a4e8369 121 SUPERFAMILY SSF48300 3 57 1.16E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1652 a287f5f0cf50cdb6331fabf79a4e8369 121 SUPERFAMILY SSF54736 50 121 6.63E-26 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BD65_1652 a287f5f0cf50cdb6331fabf79a4e8369 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 6.2E-32 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1652 a287f5f0cf50cdb6331fabf79a4e8369 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 4.0E-47 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1652 a287f5f0cf50cdb6331fabf79a4e8369 121 Gene3D G3DSA:1.20.5.710 2 50 2.3E-22 T 14-10-2018 BD65_1652 a287f5f0cf50cdb6331fabf79a4e8369 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 2.4E-15 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1395 70bc506ef6107719b16fc41fde9e1f5e 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 1.4E-51 T 14-10-2018 IPR016476 SH3 domain protein BD65_1395 70bc506ef6107719b16fc41fde9e1f5e 206 PIRSF PIRSF006158 1 205 1.4E-67 T 14-10-2018 IPR016476 SH3 domain protein BD65_1395 70bc506ef6107719b16fc41fde9e1f5e 206 Pfam PF08239 Bacterial SH3 domain 35 85 4.4E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type BD65_1395 70bc506ef6107719b16fc41fde9e1f5e 206 Gene3D G3DSA:2.30.30.40 34 86 1.4E-5 T 14-10-2018 BD65_1395 70bc506ef6107719b16fc41fde9e1f5e 206 SMART SM00287 23 89 6.9E-5 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type BD65_3173 fecbe2e8637a5258ef567212b59484cd 371 Gene3D G3DSA:3.90.1150.10 10 348 2.1E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_3173 fecbe2e8637a5258ef567212b59484cd 371 Gene3D G3DSA:3.40.640.10 55 259 2.1E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_3173 fecbe2e8637a5258ef567212b59484cd 371 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 BD65_3173 fecbe2e8637a5258ef567212b59484cd 371 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 352 5.6E-122 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BD65_3173 fecbe2e8637a5258ef567212b59484cd 371 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 356 54.145 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BD65_3173 fecbe2e8637a5258ef567212b59484cd 371 Pfam PF00155 Aminotransferase class I and II 47 352 1.7E-61 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BD65_3173 fecbe2e8637a5258ef567212b59484cd 371 SUPERFAMILY SSF53383 10 352 1.32E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_2661 8ca6d8a4eae148c099906791264ecd47 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 164 176 1.7E-12 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BD65_2661 8ca6d8a4eae148c099906791264ecd47 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 1.7E-12 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BD65_2661 8ca6d8a4eae148c099906791264ecd47 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 1.7E-12 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BD65_2661 8ca6d8a4eae148c099906791264ecd47 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 1.7E-12 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BD65_2661 8ca6d8a4eae148c099906791264ecd47 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 1.7E-12 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BD65_2661 8ca6d8a4eae148c099906791264ecd47 252 Gene3D G3DSA:3.30.300.30 94 199 1.2E-31 T 14-10-2018 BD65_2661 8ca6d8a4eae148c099906791264ecd47 252 Gene3D G3DSA:3.30.70.1530 17 93 7.7E-30 T 14-10-2018 BD65_2661 8ca6d8a4eae148c099906791264ecd47 252 Pfam PF01514 Secretory protein of YscJ/FliF family 8 185 2.0E-18 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF BD65_2661 8ca6d8a4eae148c099906791264ecd47 252 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 6 190 1.5E-64 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BD65_1276 bdcafaa9dff3c0d933128a480e4ca0c5 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 39.702 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BD65_1276 bdcafaa9dff3c0d933128a480e4ca0c5 128 Pfam PF01597 Glycine cleavage H-protein 8 127 6.3E-46 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate BD65_1276 bdcafaa9dff3c0d933128a480e4ca0c5 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BD65_1276 bdcafaa9dff3c0d933128a480e4ca0c5 128 Gene3D G3DSA:2.40.50.100 2 128 2.2E-50 T 14-10-2018 BD65_1276 bdcafaa9dff3c0d933128a480e4ca0c5 128 SUPERFAMILY SSF51230 4 127 3.27E-43 T 14-10-2018 IPR011053 Single hybrid motif BD65_1276 bdcafaa9dff3c0d933128a480e4ca0c5 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 7.9E-54 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BD65_2553 d4855fe4bd68bc0500dcdf9daca579a1 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2553 d4855fe4bd68bc0500dcdf9daca579a1 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.3E-159 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2553 d4855fe4bd68bc0500dcdf9daca579a1 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2553 d4855fe4bd68bc0500dcdf9daca579a1 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.1E-36 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BD65_2553 d4855fe4bd68bc0500dcdf9daca579a1 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.997 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2553 d4855fe4bd68bc0500dcdf9daca579a1 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_1469 9d504cee5be9a16ecb3b56b46c1468d4 264 SMART SM00895 96 220 1.9E-14 T 14-10-2018 IPR011711 GntR, C-terminal BD65_1469 9d504cee5be9a16ecb3b56b46c1468d4 264 SUPERFAMILY SSF46785 2 76 6.52E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1469 9d504cee5be9a16ecb3b56b46c1468d4 264 SUPERFAMILY SSF48008 94 226 6.02E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BD65_1469 9d504cee5be9a16ecb3b56b46c1468d4 264 SMART SM00345 13 72 8.8E-25 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_1469 9d504cee5be9a16ecb3b56b46c1468d4 264 Gene3D G3DSA:1.20.120.530 95 232 2.0E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BD65_1469 9d504cee5be9a16ecb3b56b46c1468d4 264 Pfam PF07729 FCD domain 96 219 2.0E-17 T 14-10-2018 IPR011711 GntR, C-terminal BD65_1469 9d504cee5be9a16ecb3b56b46c1468d4 264 Gene3D G3DSA:1.10.10.10 3 82 6.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1469 9d504cee5be9a16ecb3b56b46c1468d4 264 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 1.8E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_1469 9d504cee5be9a16ecb3b56b46c1468d4 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.4E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_1469 9d504cee5be9a16ecb3b56b46c1468d4 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.4E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 6.6E-69 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.6E-69 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 236 253 6.6E-69 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 6.6E-69 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 6.6E-69 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 267 286 6.6E-69 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 323 339 - T 14-10-2018 IPR013793 Porin, Gram-negative type, conserved site BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 Pfam PF00267 Gram-negative porin 27 371 1.0E-139 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 Gene3D G3DSA:2.40.160.10 22 371 9.9E-146 T 14-10-2018 IPR023614 Porin domain superfamily BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 230 242 1.0E-15 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 1.0E-15 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.0E-15 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 323 340 1.0E-15 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 1.0E-15 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3265 308f059b4f9a487f521d96b45f3b0a38 371 SUPERFAMILY SSF56935 22 371 8.93E-78 T 14-10-2018 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 Gene3D G3DSA:3.50.50.60 5 366 8.5E-147 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 Gene3D G3DSA:1.10.8.870 391 460 4.7E-27 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 SUPERFAMILY SSF51905 1 375 5.18E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 Pfam PF01266 FAD dependent oxidoreductase 5 323 1.1E-49 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 Gene3D G3DSA:3.30.9.10 82 320 8.5E-147 T 14-10-2018 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 483 3.3E-12 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_2122 8b79e6694c6f20797e6ae0063c94ca67 504 SUPERFAMILY SSF54373 226 319 3.34E-7 T 14-10-2018 BD65_1045 728f6b9ae9df0dfa303240916f416623 174 SUPERFAMILY SSF46565 1 74 4.58E-19 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BD65_1045 728f6b9ae9df0dfa303240916f416623 174 Gene3D G3DSA:1.20.1280.20 80 171 5.9E-24 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_1045 728f6b9ae9df0dfa303240916f416623 174 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 5.3E-16 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_1045 728f6b9ae9df0dfa303240916f416623 174 SMART SM00271 1 66 9.2E-11 T 14-10-2018 IPR001623 DnaJ domain BD65_1045 728f6b9ae9df0dfa303240916f416623 174 SUPERFAMILY SSF47144 78 171 3.79E-24 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_1045 728f6b9ae9df0dfa303240916f416623 174 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.825 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_1045 728f6b9ae9df0dfa303240916f416623 174 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.7E-51 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_1045 728f6b9ae9df0dfa303240916f416623 174 Pfam PF00226 DnaJ domain 2 70 6.2E-7 T 14-10-2018 IPR001623 DnaJ domain BD65_1045 728f6b9ae9df0dfa303240916f416623 174 Gene3D G3DSA:1.10.287.110 1 79 1.6E-24 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 Gene3D G3DSA:1.10.579.10 293 474 2.2E-82 T 14-10-2018 BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 Pfam PF03441 FAD binding domain of DNA photolyase 275 469 1.7E-81 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 SUPERFAMILY SSF52425 3 198 2.49E-51 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 Gene3D G3DSA:3.40.50.620 5 204 1.1E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 Gene3D G3DSA:1.25.40.80 133 289 1.1E-75 T 14-10-2018 BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 SUPERFAMILY SSF48173 191 472 2.49E-107 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 Pfam PF00875 DNA photolyase 5 174 2.8E-39 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 PRINTS PR00147 DNA photolyase signature 345 363 1.2E-30 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 PRINTS PR00147 DNA photolyase signature 384 398 1.2E-30 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 PRINTS PR00147 DNA photolyase signature 144 160 1.2E-30 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BD65_3017 0fdda68d0b21576f0d6b671bddd7f41f 479 PRINTS PR00147 DNA photolyase signature 325 341 1.2E-30 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BD65_3248 68ea39550ab4c99eac419fb3d7f71789 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 40.464 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BD65_3248 68ea39550ab4c99eac419fb3d7f71789 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 320 3.7E-103 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BD65_3248 68ea39550ab4c99eac419fb3d7f71789 328 SUPERFAMILY SSF52540 46 181 1.04E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3248 68ea39550ab4c99eac419fb3d7f71789 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 318 3.4E-114 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BD65_1149 a53a9476a66942296acf9369bafb4054 390 SUPERFAMILY SSF111369 57 113 2.75E-6 T 14-10-2018 BD65_1149 a53a9476a66942296acf9369bafb4054 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 7.8E-137 T 14-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 BD65_1149 a53a9476a66942296acf9369bafb4054 390 Gene3D G3DSA:2.40.50.100 60 94 5.7E-14 T 14-10-2018 BD65_1149 a53a9476a66942296acf9369bafb4054 390 Gene3D G3DSA:2.40.30.170 232 352 1.2E-34 T 14-10-2018 BD65_1149 a53a9476a66942296acf9369bafb4054 390 SUPERFAMILY SSF111369 168 269 5.36E-10 T 14-10-2018 BD65_1149 a53a9476a66942296acf9369bafb4054 390 Gene3D G3DSA:1.10.287.470 95 186 5.7E-14 T 14-10-2018 BD65_1149 a53a9476a66942296acf9369bafb4054 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 347 2.5E-15 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BD65_1149 a53a9476a66942296acf9369bafb4054 390 SUPERFAMILY SSF111369 119 179 7.45E-5 T 14-10-2018 BD65_1149 a53a9476a66942296acf9369bafb4054 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 1.2E-12 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BD65_1551 ac8f4241cc518762e7c6da55061d0060 333 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 5 333 55.5 T 14-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 BD65_1551 ac8f4241cc518762e7c6da55061d0060 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 107 266 9.0E-28 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 BD65_1551 ac8f4241cc518762e7c6da55061d0060 333 Gene3D G3DSA:3.90.420.10 63 333 2.1E-120 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BD65_1551 ac8f4241cc518762e7c6da55061d0060 333 SUPERFAMILY SSF56524 73 329 7.06E-93 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 Gene3D G3DSA:1.10.150.570 570 622 1.2E-23 T 14-10-2018 BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.709 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.8E-294 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 Gene3D G3DSA:3.50.50.60 2 249 8.7E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 Gene3D G3DSA:3.50.50.60 293 458 3.1E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 SMART SM01228 546 617 2.7E-45 T 14-10-2018 BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 Pfam PF13932 GidA associated domain 402 616 2.5E-76 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 Pfam PF01134 Glucose inhibited division protein A 8 397 1.2E-168 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 Gene3D G3DSA:1.10.10.1800 459 550 3.3E-30 T 14-10-2018 BD65_1980 e15a6e498f9b610531ab3d9f1d1c3ecd 629 SUPERFAMILY SSF51905 6 261 1.22E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2509 1e8c8b9fa06921b892f7c18ce709108a 156 Gene3D G3DSA:2.40.10.330 73 129 3.8E-41 T 14-10-2018 BD65_2509 1e8c8b9fa06921b892f7c18ce709108a 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 114 5.9E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BD65_2509 1e8c8b9fa06921b892f7c18ce709108a 156 Gene3D G3DSA:3.10.50.40 14 142 3.8E-41 T 14-10-2018 BD65_2509 1e8c8b9fa06921b892f7c18ce709108a 156 SUPERFAMILY SSF54534 5 143 1.69E-35 T 14-10-2018 BD65_1961 29201fd79ab76054ca6ec69d2e673121 172 Gene3D G3DSA:2.20.25.120 52 84 4.4E-59 T 14-10-2018 BD65_1961 29201fd79ab76054ca6ec69d2e673121 172 Gene3D G3DSA:3.40.50.300 9 164 4.4E-59 T 14-10-2018 BD65_1961 29201fd79ab76054ca6ec69d2e673121 172 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 9.2E-48 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 BD65_1961 29201fd79ab76054ca6ec69d2e673121 172 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 7.3E-48 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 BD65_1961 29201fd79ab76054ca6ec69d2e673121 172 SUPERFAMILY SSF52540 6 169 1.19E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_74 288c5d67ef39ee37286d8f825833de11 1148 SMART SM01058 476 573 1.5E-52 T 14-10-2018 IPR003711 CarD-like/TRCF domain BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Gene3D G3DSA:3.40.50.300 539 778 3.7E-235 T 14-10-2018 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 SUPERFAMILY SSF52540 351 463 1.17E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_74 288c5d67ef39ee37286d8f825833de11 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 SUPERFAMILY SSF143517 992 1143 3.01E-41 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain BD65_74 288c5d67ef39ee37286d8f825833de11 1148 SMART SM00487 597 787 7.5E-33 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Pfam PF03461 TRCF domain 1006 1097 8.2E-25 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1144 27.727 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Gene3D G3DSA:3.40.50.11180 24 334 2.0E-126 T 14-10-2018 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 3.5E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Gene3D G3DSA:3.40.50.300 475 987 3.7E-235 T 14-10-2018 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Gene3D G3DSA:3.30.2060.10 128 213 2.0E-126 T 14-10-2018 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 SUPERFAMILY SSF52540 520 780 9.76E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Gene3D G3DSA:2.30.30.840 480 538 3.7E-235 T 14-10-2018 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Gene3D G3DSA:3.40.50.11140 354 450 4.3E-36 T 14-10-2018 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Gene3D G3DSA:3.90.1150.50 1001 1148 2.5E-44 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 1.5E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain BD65_74 288c5d67ef39ee37286d8f825833de11 1148 SUPERFAMILY SSF52540 779 987 5.32E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_74 288c5d67ef39ee37286d8f825833de11 1148 SMART SM00982 1005 1105 1.9E-43 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BD65_74 288c5d67ef39ee37286d8f825833de11 1148 SUPERFAMILY SSF141259 468 545 3.27E-24 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily BD65_74 288c5d67ef39ee37286d8f825833de11 1148 SMART SM00490 823 907 6.1E-19 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_74 288c5d67ef39ee37286d8f825833de11 1148 SUPERFAMILY SSF52540 10 340 3.89E-102 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_74 288c5d67ef39ee37286d8f825833de11 1148 Pfam PF00271 Helicase conserved C-terminal domain 802 906 8.2E-18 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_68 dce8300b200294ef540886d706ac9448 195 Pfam PF13036 Peptidoglycan-synthase activator LpoB 56 192 7.4E-33 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB BD65_68 dce8300b200294ef540886d706ac9448 195 Gene3D G3DSA:3.40.50.10610 59 195 5.0E-52 T 14-10-2018 BD65_68 dce8300b200294ef540886d706ac9448 195 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 2 194 2.3E-51 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB BD65_68 dce8300b200294ef540886d706ac9448 195 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 194 36.255 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB BD65_1086 5d62da56fa884bbac18223efabe5fb01 318 Pfam PF03888 MucB/RseB N-terminal domain 27 195 5.9E-61 T 14-10-2018 IPR033434 MucB/RseB, N-terminal BD65_1086 5d62da56fa884bbac18223efabe5fb01 318 Pfam PF17188 MucB/RseB C-terminal domain 218 312 5.6E-26 T 14-10-2018 IPR033436 MucB/RseB, C-terminal BD65_1086 5d62da56fa884bbac18223efabe5fb01 318 Gene3D G3DSA:3.30.200.100 218 318 5.0E-28 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily BD65_1086 5d62da56fa884bbac18223efabe5fb01 318 Gene3D G3DSA:2.50.20.10 26 209 8.8E-54 T 14-10-2018 BD65_1086 5d62da56fa884bbac18223efabe5fb01 318 PIRSF PIRSF005427 2 318 5.1E-85 T 14-10-2018 IPR005588 MucB/RseB BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 1.9E-75 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 Gene3D G3DSA:3.30.930.10 65 270 1.9E-73 T 14-10-2018 BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 74 3.5E-26 T 14-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 Gene3D G3DSA:1.10.10.10 1 64 5.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 SUPERFAMILY SSF55681 73 268 2.32E-58 T 14-10-2018 BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 4.5E-10 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 SUPERFAMILY SSF50037 271 317 6.87E-11 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 Gene3D G3DSA:2.30.30.100 271 313 2.3E-22 T 14-10-2018 BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 Pfam PF08279 HTH domain 10 58 1.4E-11 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.812 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 SUPERFAMILY SSF46785 8 60 1.32E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1665 fbd9fe20ee88439bb6834b15924f292e 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 2.3E-25 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BD65_2341 aedfd81b45ed5c45268a88e26da77c80 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 6.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2341 aedfd81b45ed5c45268a88e26da77c80 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 6.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2341 aedfd81b45ed5c45268a88e26da77c80 351 SMART SM00388 136 196 2.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2341 aedfd81b45ed5c45268a88e26da77c80 351 SMART SM00387 242 351 2.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2341 aedfd81b45ed5c45268a88e26da77c80 351 SUPERFAMILY SSF55874 186 348 2.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2341 aedfd81b45ed5c45268a88e26da77c80 351 Gene3D G3DSA:3.30.565.10 213 351 4.0E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2341 aedfd81b45ed5c45268a88e26da77c80 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 195 3.9E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2341 aedfd81b45ed5c45268a88e26da77c80 351 Gene3D G3DSA:1.10.287.130 87 197 2.7E-19 T 14-10-2018 BD65_2341 aedfd81b45ed5c45268a88e26da77c80 351 SUPERFAMILY SSF47384 121 194 1.53E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_2341 aedfd81b45ed5c45268a88e26da77c80 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 245 348 1.9E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_943 c724cab7101c34175d641e8c12e3d329 320 Gene3D G3DSA:3.30.1400.10 179 319 2.0E-54 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 BD65_943 c724cab7101c34175d641e8c12e3d329 320 SMART SM00771 181 311 2.1E-77 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BD65_943 c724cab7101c34175d641e8c12e3d329 320 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 184 310 4.8E-49 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BD65_943 c724cab7101c34175d641e8c12e3d329 320 SUPERFAMILY SSF64383 182 315 3.14E-48 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 BD65_943 c724cab7101c34175d641e8c12e3d329 320 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 313 24.974 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 BD65_943 c724cab7101c34175d641e8c12e3d329 320 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 311 2.2E-83 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 BD65_943 c724cab7101c34175d641e8c12e3d329 320 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 190 318 2.0E-68 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 Gene3D G3DSA:3.90.1170.30 337 433 4.9E-33 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.9E-164 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 Gene3D G3DSA:1.20.970.10 7 195 2.8E-128 T 14-10-2018 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 SMART SM00941 350 424 2.3E-32 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 4.7E-229 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 351 423 3.1E-24 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 SUPERFAMILY SSF47648 3 70 1.96E-21 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 PIRSF PIRSF000478 1 439 3.2E-151 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 46.942 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 SUPERFAMILY SSF52418 75 334 1.19E-86 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 3.1E-51 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 Gene3D G3DSA:3.40.1030.10 70 322 2.8E-128 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.5E-18 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2476 1e52936849122432ceb1575a0dac43f3 440 SUPERFAMILY SSF54680 337 438 9.03E-33 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2438 6dbe2beb307e3dc5981c19b21fbc3b5a 165 Pfam PF03830 PTS system sorbose subfamily IIB component 6 154 1.5E-46 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 BD65_2438 6dbe2beb307e3dc5981c19b21fbc3b5a 165 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 154 4.1E-51 T 14-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 BD65_2438 6dbe2beb307e3dc5981c19b21fbc3b5a 165 Gene3D G3DSA:3.40.35.10 1 164 5.6E-48 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 BD65_2438 6dbe2beb307e3dc5981c19b21fbc3b5a 165 SUPERFAMILY SSF52728 5 161 1.05E-46 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 BD65_1840 8e6722a8b74d96a6f5c9464140c77694 289 Pfam PF05036 Sporulation related domain 215 283 3.8E-17 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 BD65_1840 8e6722a8b74d96a6f5c9464140c77694 289 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 283 2.9E-78 T 14-10-2018 IPR011930 Cell division protein FtsN GO:0005515 BD65_1840 8e6722a8b74d96a6f5c9464140c77694 289 Hamap MF_02039 Cell division protein FtsN [ftsN]. 33 289 34.342 T 14-10-2018 IPR011930 Cell division protein FtsN GO:0005515 BD65_1840 8e6722a8b74d96a6f5c9464140c77694 289 Gene3D G3DSA:3.30.70.1070 210 289 1.2E-31 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BD65_1840 8e6722a8b74d96a6f5c9464140c77694 289 SUPERFAMILY SSF110997 215 284 6.02E-20 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BD65_2387 56c99d610354b5b9791cd9479711428d 335 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 3.2E-136 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BD65_2387 56c99d610354b5b9791cd9479711428d 335 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 84.055 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BD65_2387 56c99d610354b5b9791cd9479711428d 335 Gene3D G3DSA:3.40.50.1370 150 319 8.1E-140 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BD65_2387 56c99d610354b5b9791cd9479711428d 335 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BD65_2387 56c99d610354b5b9791cd9479711428d 335 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 2.5E-48 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BD65_2387 56c99d610354b5b9791cd9479711428d 335 SUPERFAMILY SSF53671 2 332 5.76E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BD65_2387 56c99d610354b5b9791cd9479711428d 335 Gene3D G3DSA:3.40.50.1370 6 329 8.1E-140 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BD65_2387 56c99d610354b5b9791cd9479711428d 335 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 7.5E-55 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BD65_2387 56c99d610354b5b9791cd9479711428d 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 1.8E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BD65_2387 56c99d610354b5b9791cd9479711428d 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 1.8E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BD65_2387 56c99d610354b5b9791cd9479711428d 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 1.8E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BD65_2387 56c99d610354b5b9791cd9479711428d 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.8E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BD65_2387 56c99d610354b5b9791cd9479711428d 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.8E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BD65_2387 56c99d610354b5b9791cd9479711428d 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 6.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BD65_2387 56c99d610354b5b9791cd9479711428d 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 6.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BD65_2387 56c99d610354b5b9791cd9479711428d 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 6.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BD65_2387 56c99d610354b5b9791cd9479711428d 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 6.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BD65_2995 5726d2366c646db6a0956ddcd3f9cfe8 379 PIRSF PIRSF038994 1 379 2.0E-114 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BD65_2995 5726d2366c646db6a0956ddcd3f9cfe8 379 Gene3D G3DSA:3.20.20.140 55 344 3.6E-137 T 14-10-2018 BD65_2995 5726d2366c646db6a0956ddcd3f9cfe8 379 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 3.6E-163 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BD65_2995 5726d2366c646db6a0956ddcd3f9cfe8 379 SUPERFAMILY SSF51338 1 53 9.45E-19 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_2995 5726d2366c646db6a0956ddcd3f9cfe8 379 SUPERFAMILY SSF51556 54 350 1.46E-100 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_2995 5726d2366c646db6a0956ddcd3f9cfe8 379 Gene3D G3DSA:2.30.40.10 7 376 3.6E-137 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_2995 5726d2366c646db6a0956ddcd3f9cfe8 379 Pfam PF01979 Amidohydrolase family 50 379 2.4E-42 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BD65_2580 c322e3f5cf81933f44810d28a3ea981c 887 SUPERFAMILY SSF52518 59 469 6.66E-143 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_2580 c322e3f5cf81933f44810d28a3ea981c 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 294 1.9E-8 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BD65_2580 c322e3f5cf81933f44810d28a3ea981c 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 361 453 8.2E-5 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BD65_2580 c322e3f5cf81933f44810d28a3ea981c 887 Gene3D G3DSA:3.40.50.970 58 471 3.0E-135 T 14-10-2018 BD65_2580 c322e3f5cf81933f44810d28a3ea981c 887 PIRSF PIRSF000156 1 887 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BD65_2580 c322e3f5cf81933f44810d28a3ea981c 887 SUPERFAMILY SSF52922 702 885 1.92E-61 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BD65_2580 c322e3f5cf81933f44810d28a3ea981c 887 Gene3D G3DSA:3.40.50.970 472 706 4.1E-112 T 14-10-2018 BD65_2580 c322e3f5cf81933f44810d28a3ea981c 887 Gene3D G3DSA:3.40.50.920 707 887 8.5E-73 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BD65_2580 c322e3f5cf81933f44810d28a3ea981c 887 SUPERFAMILY SSF52518 474 701 1.53E-99 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_2580 c322e3f5cf81933f44810d28a3ea981c 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 6 886 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.253 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 Gene3D G3DSA:3.40.50.880 152 379 2.4E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.3E-11 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.3E-11 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.3E-11 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 SMART SM01097 3 133 1.1E-90 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 SUPERFAMILY SSF52317 153 377 5.5E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 9.9E-41 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 9.9E-41 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 9.9E-41 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 9.9E-41 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 9.9E-41 T 14-10-2018 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 SUPERFAMILY SSF52021 3 143 7.98E-57 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 Pfam PF00117 Glutamine amidotransferase class-I 197 372 7.1E-49 T 14-10-2018 IPR017926 Glutamine amidotransferase BD65_2512 68cf744ad61a7445ed8418db004a838b 387 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 9.9E-150 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 Gene3D G3DSA:3.50.30.20 2 151 6.2E-61 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_2512 68cf744ad61a7445ed8418db004a838b 387 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 7.1E-52 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_426 1b36d4038b692b32abbbec46d685df63 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BD65_426 1b36d4038b692b32abbbec46d685df63 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 38.437 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BD65_426 1b36d4038b692b32abbbec46d685df63 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 217 2.4E-94 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BD65_426 1b36d4038b692b32abbbec46d685df63 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 3.1E-18 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BD65_426 1b36d4038b692b32abbbec46d685df63 217 SUPERFAMILY SSF50475 20 217 4.12E-67 T 14-10-2018 BD65_426 1b36d4038b692b32abbbec46d685df63 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 38 121 3.4E-24 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BD65_426 1b36d4038b692b32abbbec46d685df63 217 PIRSF PIRSF000190 1 217 2.0E-81 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BD65_426 1b36d4038b692b32abbbec46d685df63 217 Gene3D G3DSA:2.30.110.10 19 217 1.9E-76 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 Gene3D G3DSA:1.20.1060.10 548 663 3.7E-39 T 14-10-2018 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 Gene3D G3DSA:1.10.150.20 714 857 1.2E-116 T 14-10-2018 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 SUPERFAMILY SSF53098 332 523 4.7E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 ProSitePatterns PS00447 DNA polymerase family A signature. 759 778 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 SUPERFAMILY SSF88723 7 170 3.93E-57 T 14-10-2018 IPR029060 PIN-like domain superfamily BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 SMART SM00475 7 268 2.5E-140 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 SUPERFAMILY SSF56672 527 934 1.45E-158 T 14-10-2018 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 Pfam PF00476 DNA polymerase family A 557 931 2.0E-155 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 TIGRFAM TIGR00593 pola: DNA polymerase I 9 934 7.5E-289 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 SUPERFAMILY SSF47807 171 289 8.82E-31 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 Gene3D G3DSA:3.30.420.10 332 547 5.8E-71 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 SMART SM00482 691 898 3.7E-118 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 7.9E-30 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 Gene3D G3DSA:3.30.70.370 669 930 1.2E-116 T 14-10-2018 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 SMART SM00474 335 522 3.8E-46 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 Gene3D G3DSA:1.10.150.20 174 253 1.0E-97 T 14-10-2018 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 SMART SM00279 173 208 1.3E-12 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 9.6E-56 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 784 1.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 660 682 1.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 881 894 1.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 683 698 1.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 728 1.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 818 829 1.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 807 1.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 735 748 1.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 850 866 1.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 Pfam PF01612 3'-5' exonuclease 335 522 2.3E-43 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BD65_1956 547d9e619a08fb35c0571c153259a6e8 934 Gene3D G3DSA:3.40.50.1010 9 284 1.0E-97 T 14-10-2018 BD65_1843 f2c8c7891228c48b153183575082e79a 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 21.168 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BD65_1843 f2c8c7891228c48b153183575082e79a 305 Pfam PF01040 UbiA prenyltransferase family 29 274 8.5E-34 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BD65_1843 f2c8c7891228c48b153183575082e79a 305 PIRSF PIRSF005355 1 305 8.1E-86 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 BD65_1843 f2c8c7891228c48b153183575082e79a 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 6.5E-127 T 14-10-2018 BD65_1568 b4c36f33ab9c4609d771b5a29efa93c0 455 Pfam PF00860 Permease family 32 415 1.1E-82 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 SUPERFAMILY SSF52096 20 312 7.85E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_900 d37c6453baa830eac999e7944a97a0ae 734 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 14 724 52.325 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 SUPERFAMILY SSF51735 320 502 5.77E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_900 d37c6453baa830eac999e7944a97a0ae 734 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 505 598 5.3E-23 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 636 719 2.1E-6 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 Gene3D G3DSA:3.90.226.10 17 317 2.2E-92 T 14-10-2018 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 Gene3D G3DSA:1.10.1040.50 508 719 7.3E-66 T 14-10-2018 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 Gene3D G3DSA:3.40.50.720 322 507 7.4E-60 T 14-10-2018 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 20 724 0.0 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 502 527 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 Pfam PF00378 Enoyl-CoA hydratase/isomerase 30 216 9.7E-41 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 SUPERFAMILY SSF48179 505 603 1.79E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 324 502 3.1E-56 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BD65_900 d37c6453baa830eac999e7944a97a0ae 734 SUPERFAMILY SSF48179 634 724 2.04E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_3027 85ff02a5b91159498cae095b8c374dbd 129 PIRSF PIRSF000178 2 129 1.6E-30 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3027 85ff02a5b91159498cae095b8c374dbd 129 SUPERFAMILY SSF81343 3 129 6.38E-34 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3027 85ff02a5b91159498cae095b8c374dbd 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3027 85ff02a5b91159498cae095b8c374dbd 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 3.2E-38 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3027 85ff02a5b91159498cae095b8c374dbd 129 Gene3D G3DSA:1.20.1300.10 1 129 6.2E-45 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3027 85ff02a5b91159498cae095b8c374dbd 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 6.1E-29 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3027 85ff02a5b91159498cae095b8c374dbd 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2205 90fc43a3bb24f971db296808438d5a7b 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 1.8E-15 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BD65_2205 90fc43a3bb24f971db296808438d5a7b 64 Gene3D G3DSA:1.10.10.1100 1 57 2.3E-19 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 5.1E-37 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.1E-37 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.1E-37 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.1E-37 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.1E-37 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.1E-37 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.2E-6 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.2E-6 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 SUPERFAMILY SSF52317 1 190 2.29E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 1.1E-93 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 Gene3D G3DSA:3.40.50.880 1 191 2.2E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.5E-14 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.5E-14 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.5E-14 T 14-10-2018 BD65_2175 81bfff2e8f6e60973ae4dc29cadddd2a 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 9.4E-56 T 14-10-2018 IPR017926 Glutamine amidotransferase BD65_124 5e192df193daa03f50ab64671e074525 447 Pfam PF04996 Succinylarginine dihydrolase 4 445 4.0E-213 T 14-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 BD65_124 5e192df193daa03f50ab64671e074525 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 58.208 T 14-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 BD65_124 5e192df193daa03f50ab64671e074525 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 1.5E-239 T 14-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 BD65_124 5e192df193daa03f50ab64671e074525 447 SUPERFAMILY SSF55909 4 446 4.51E-199 T 14-10-2018 BD65_124 5e192df193daa03f50ab64671e074525 447 Gene3D G3DSA:3.75.10.20 1 447 2.0E-204 T 14-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 BD65_1415 56cd4eec49cdc67b2c1b175695727713 291 SUPERFAMILY SSF52540 25 243 6.92E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1415 56cd4eec49cdc67b2c1b175695727713 291 Pfam PF01926 50S ribosome-binding GTPase 39 150 1.3E-15 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_1415 56cd4eec49cdc67b2c1b175695727713 291 Gene3D G3DSA:3.40.50.300 31 223 1.3E-34 T 14-10-2018 BD65_2119 24e5221ff890e56f2261f6cf35d00815 425 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 2.4E-155 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BD65_2119 24e5221ff890e56f2261f6cf35d00815 425 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 53.009 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BD65_2119 24e5221ff890e56f2261f6cf35d00815 425 SUPERFAMILY SSF53448 20 294 1.85E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2119 24e5221ff890e56f2261f6cf35d00815 425 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BD65_2119 24e5221ff890e56f2261f6cf35d00815 425 Gene3D G3DSA:3.90.550.10 2 300 9.1E-92 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2119 24e5221ff890e56f2261f6cf35d00815 425 Gene3D G3DSA:2.160.10.10 301 425 3.5E-40 T 14-10-2018 BD65_2119 24e5221ff890e56f2261f6cf35d00815 425 Pfam PF00483 Nucleotidyl transferase 22 291 2.0E-68 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BD65_2119 24e5221ff890e56f2261f6cf35d00815 425 SUPERFAMILY SSF51161 313 414 6.24E-19 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BD65_2119 24e5221ff890e56f2261f6cf35d00815 425 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BD65_2119 24e5221ff890e56f2261f6cf35d00815 425 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BD65_2299 521f7267285187aed272ed8c2f0ea6b0 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 216.902 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BD65_2299 521f7267285187aed272ed8c2f0ea6b0 432 Gene3D G3DSA:1.10.300.10 102 201 5.5E-105 T 14-10-2018 BD65_2299 521f7267285187aed272ed8c2f0ea6b0 432 SUPERFAMILY SSF52540 3 431 7.12E-179 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2299 521f7267285187aed272ed8c2f0ea6b0 432 SMART SM00788 4 425 4.7E-297 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BD65_2299 521f7267285187aed272ed8c2f0ea6b0 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BD65_2299 521f7267285187aed272ed8c2f0ea6b0 432 Gene3D G3DSA:3.40.440.10 6 249 5.5E-105 T 14-10-2018 BD65_2299 521f7267285187aed272ed8c2f0ea6b0 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BD65_2299 521f7267285187aed272ed8c2f0ea6b0 432 Gene3D G3DSA:3.90.170.10 267 432 2.4E-70 T 14-10-2018 BD65_2299 521f7267285187aed272ed8c2f0ea6b0 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.7E-178 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BD65_2299 521f7267285187aed272ed8c2f0ea6b0 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 1.2E-201 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BD65_2148 b86b0e138d962d3fcdd2053a7e08e3c7 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 2.0E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2148 b86b0e138d962d3fcdd2053a7e08e3c7 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 2.0E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2148 b86b0e138d962d3fcdd2053a7e08e3c7 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 2.0E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2148 b86b0e138d962d3fcdd2053a7e08e3c7 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 2.0E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2148 b86b0e138d962d3fcdd2053a7e08e3c7 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.0E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2148 b86b0e138d962d3fcdd2053a7e08e3c7 229 SUPERFAMILY SSF56784 6 217 1.54E-44 T 14-10-2018 IPR036412 HAD-like superfamily BD65_2148 b86b0e138d962d3fcdd2053a7e08e3c7 229 Gene3D G3DSA:3.40.50.1000 9 203 2.7E-26 T 14-10-2018 IPR023214 HAD superfamily BD65_2148 b86b0e138d962d3fcdd2053a7e08e3c7 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 5.2E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2148 b86b0e138d962d3fcdd2053a7e08e3c7 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 3.0E-11 T 14-10-2018 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 SUPERFAMILY SSF54919 1 140 1.7E-58 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 9.4E-56 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 SMART SM00562 3 140 2.0E-84 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 Gene3D G3DSA:3.30.70.141 1 141 1.6E-58 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.3E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.3E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.3E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.3E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.3E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.854 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1036 7fd542a5d25d1626bf7a9b33d8ed1ec2 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1387 0f8b361bafa85f1846e54744e579c2b5 229 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 229 43.57 T 14-10-2018 IPR009576 Biofilm formation YgiB BD65_1387 0f8b361bafa85f1846e54744e579c2b5 229 Pfam PF06693 Protein of unknown function (DUF1190) 41 213 9.3E-55 T 14-10-2018 IPR009576 Biofilm formation YgiB BD65_2621 cc707702beb9bcd98acd0da5903d2898 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 36.987 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BD65_2621 cc707702beb9bcd98acd0da5903d2898 223 Gene3D G3DSA:3.20.20.70 2 223 1.7E-55 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2621 cc707702beb9bcd98acd0da5903d2898 223 SUPERFAMILY SSF102114 24 117 1.57E-6 T 14-10-2018 BD65_2621 cc707702beb9bcd98acd0da5903d2898 223 PIRSF PIRSF000370 1 223 6.1E-70 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BD65_2621 cc707702beb9bcd98acd0da5903d2898 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 1.4E-13 T 14-10-2018 BD65_2621 cc707702beb9bcd98acd0da5903d2898 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 1.0E-111 T 14-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BD65_2621 cc707702beb9bcd98acd0da5903d2898 223 Pfam PF04055 Radical SAM superfamily 26 123 1.1E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_907 f08e682cec289c5a247b6d499d46cec5 183 Pfam PF08534 Redoxin 42 164 4.4E-22 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BD65_907 f08e682cec289c5a247b6d499d46cec5 183 SUPERFAMILY SSF52833 46 179 2.53E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_907 f08e682cec289c5a247b6d499d46cec5 183 Gene3D G3DSA:3.40.30.10 36 182 1.1E-43 T 14-10-2018 BD65_907 f08e682cec289c5a247b6d499d46cec5 183 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 5.6E-76 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 BD65_907 f08e682cec289c5a247b6d499d46cec5 183 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BD65_2525 d6e6354b780bb75d35631199b46a9edb 793 Pfam PF03968 OstA-like protein 52 193 2.0E-29 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal BD65_2525 d6e6354b780bb75d35631199b46a9edb 793 Pfam PF04453 Organic solvent tolerance protein 307 706 2.1E-99 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 BD65_2525 d6e6354b780bb75d35631199b46a9edb 793 Gene3D G3DSA:2.60.450.10 45 115 1.7E-7 T 14-10-2018 BD65_2525 d6e6354b780bb75d35631199b46a9edb 793 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 772 20.098 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 BD65_1083 87ca8f1eb296f616b672cb29ab0e146d 325 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BD65_1083 87ca8f1eb296f616b672cb29ab0e146d 325 Pfam PF00717 Peptidase S24-like 86 160 8.8E-21 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BD65_1083 87ca8f1eb296f616b672cb29ab0e146d 325 ProSitePatterns PS00761 Signal peptidases I signature 3. 270 283 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BD65_1083 87ca8f1eb296f616b672cb29ab0e146d 325 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 1.4E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BD65_1083 87ca8f1eb296f616b672cb29ab0e146d 325 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 1.4E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BD65_1083 87ca8f1eb296f616b672cb29ab0e146d 325 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 265 284 1.4E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BD65_1083 87ca8f1eb296f616b672cb29ab0e146d 325 Pfam PF10502 Signal peptidase, peptidase S26 260 303 2.5E-6 T 14-10-2018 IPR019533 Peptidase S26 BD65_1083 87ca8f1eb296f616b672cb29ab0e146d 325 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 305 8.3E-44 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BD65_1083 87ca8f1eb296f616b672cb29ab0e146d 325 SUPERFAMILY SSF51306 78 324 2.62E-77 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 Gene3D G3DSA:1.10.10.10 165 247 2.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 SMART SM00100 30 151 1.1E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 1.8E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 Gene3D G3DSA:2.60.120.10 43 164 6.8E-49 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 SUPERFAMILY SSF51206 23 162 2.49E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 SUPERFAMILY SSF46785 165 245 7.44E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.1E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BD65_360 7793a6b9dbc35f737183fd6e028868aa 250 SMART SM00419 187 235 3.7E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BD65_414 6813efdccf2e17cebc7668daab73f2dc 271 Pfam PF00005 ABC transporter 31 178 8.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_414 6813efdccf2e17cebc7668daab73f2dc 271 SUPERFAMILY SSF52540 5 249 1.0E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_414 6813efdccf2e17cebc7668daab73f2dc 271 Gene3D G3DSA:3.40.50.300 3 265 2.2E-73 T 14-10-2018 BD65_414 6813efdccf2e17cebc7668daab73f2dc 271 SMART SM00382 39 228 4.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_414 6813efdccf2e17cebc7668daab73f2dc 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_920 2e2d7b800ee1f27a51bfcc022552883c 409 SUPERFAMILY SSF53383 9 394 2.39E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_920 2e2d7b800ee1f27a51bfcc022552883c 409 Pfam PF00155 Aminotransferase class I and II 37 386 6.4E-58 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BD65_920 2e2d7b800ee1f27a51bfcc022552883c 409 Gene3D G3DSA:3.90.1150.10 294 391 3.2E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_920 2e2d7b800ee1f27a51bfcc022552883c 409 Gene3D G3DSA:3.40.640.10 70 293 3.2E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_2873 952013896e75923e9801be1c2fa39428 319 SUPERFAMILY SSF53800 2 317 9.29E-101 T 14-10-2018 BD65_2873 952013896e75923e9801be1c2fa39428 319 TIGRFAM TIGR00109 hemH: ferrochelatase 2 316 5.1E-109 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BD65_2873 952013896e75923e9801be1c2fa39428 319 Hamap MF_00323 Ferrochelatase [hemH]. 3 319 37.465 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BD65_2873 952013896e75923e9801be1c2fa39428 319 Pfam PF00762 Ferrochelatase 5 316 1.5E-107 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BD65_2873 952013896e75923e9801be1c2fa39428 319 Gene3D G3DSA:3.40.50.1400 162 300 2.2E-90 T 14-10-2018 BD65_2873 952013896e75923e9801be1c2fa39428 319 Gene3D G3DSA:3.40.50.1400 6 315 2.2E-90 T 14-10-2018 BD65_2873 952013896e75923e9801be1c2fa39428 319 ProSitePatterns PS00534 Ferrochelatase signature. 188 206 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 1650 1745 9.94E-13 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:3.10.350.10 44 123 2.1E-5 T 14-10-2018 IPR036779 LysM domain superfamily BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 1244 1348 1.12E-13 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 1547 1647 5.89E-11 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 1138 1231 4.12E-15 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 825 923 1.96E-14 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 1036 1141 3.53E-17 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF09134 Invasin, domain 3 515 616 8.8E-8 T 14-10-2018 IPR015217 Invasin, domain 3 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF09134 Invasin, domain 3 1156 1226 5.3E-7 T 14-10-2018 IPR015217 Invasin, domain 3 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF09134 Invasin, domain 3 1248 1348 1.0E-23 T 14-10-2018 IPR015217 Invasin, domain 3 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF09134 Invasin, domain 3 1452 1543 4.7E-12 T 14-10-2018 IPR015217 Invasin, domain 3 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF09134 Invasin, domain 3 1653 1744 7.9E-10 T 14-10-2018 IPR015217 Invasin, domain 3 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF09134 Invasin, domain 3 1853 1948 6.7E-12 T 14-10-2018 IPR015217 Invasin, domain 3 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 1347 1444 2.04E-14 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 1353 1445 1.4E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 735 827 2.2E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 1048 1139 3.2E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.1080 2058 2127 8.4E-9 T 14-10-2018 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF11924 Inverse autotransporter, beta-domain 128 402 9.4E-99 T 14-10-2018 IPR024519 Inverse autotransporter, beta-domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 726 825 1.18E-15 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 1966 2027 7.85E-6 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 2135 2203 7.85E-6 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 2046 2113 2.63E-8 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 1853 1948 1.67E-17 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 937 1038 1.1E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 1752 1847 2.6E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 624 720 8.9E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 831 924 5.5E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 1552 1648 1.6E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 1851 1950 1.6E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 833 925 4.3E-9 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 1146 1235 8.6E-7 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 938 1033 3.2E-9 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 734 823 5.7E-4 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 1044 1135 2.8E-14 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 1352 1441 7.8E-10 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 1554 1645 0.0064 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 1757 1846 5.3E-7 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 1250 1342 0.0062 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 1655 1746 0.0079 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 1856 1948 0.0087 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 631 721 2.7E-9 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SMART SM00634 1452 1544 0.047 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF02368 Bacterial Ig-like domain (group 2) 1966 2020 8.7E-5 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 626 722 1.88E-15 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.40.160.160 164 409 5.1E-97 T 14-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 1750 1837 9.68E-15 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 1447 1546 6.02E-14 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 510 614 4.19E-7 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF01476 LysM domain 61 103 2.4E-4 T 14-10-2018 IPR018392 LysM domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF02369 Bacterial Ig-like domain (group 1) 635 714 6.5E-9 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF02369 Bacterial Ig-like domain (group 1) 1752 1837 6.2E-8 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF02369 Bacterial Ig-like domain (group 1) 944 1029 4.8E-10 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF02369 Bacterial Ig-like domain (group 1) 840 919 5.1E-10 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Pfam PF02369 Bacterial Ig-like domain (group 1) 1053 1131 1.3E-12 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.1080 2139 2211 2.4E-5 T 14-10-2018 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 1150 1236 3.9E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 1651 1749 6.2E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 507 619 2.0E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 1244 1346 8.4E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.10 1446 1548 1.5E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 Gene3D G3DSA:2.60.40.1080 1956 2038 9.7E-7 T 14-10-2018 BD65_2577 d306fbe751aa64cdef2ae4f4b6f01298 2482 SUPERFAMILY SSF49373 931 1037 3.73E-16 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BD65_2952 568c81a7e4499facad3d0d9228783450 200 Gene3D G3DSA:1.10.10.10 112 199 8.4E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2952 568c81a7e4499facad3d0d9228783450 200 SUPERFAMILY SSF46894 135 197 9.52E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2952 568c81a7e4499facad3d0d9228783450 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 196 5.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2952 568c81a7e4499facad3d0d9228783450 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.7E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2952 568c81a7e4499facad3d0d9228783450 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.7E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2952 568c81a7e4499facad3d0d9228783450 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.7E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2952 568c81a7e4499facad3d0d9228783450 200 SMART SM00421 140 197 1.9E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_1685 0f1241e28f8d1295c2240c48f53d1510 195 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 8.7E-33 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 BD65_1685 0f1241e28f8d1295c2240c48f53d1510 195 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.6E-33 T 14-10-2018 BD65_1685 0f1241e28f8d1295c2240c48f53d1510 195 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.6E-33 T 14-10-2018 BD65_1685 0f1241e28f8d1295c2240c48f53d1510 195 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.6E-33 T 14-10-2018 BD65_1685 0f1241e28f8d1295c2240c48f53d1510 195 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 18.933 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 BD65_804 37ddfcd34cdc40fb294a662160ec467d 178 SUPERFAMILY SSF55729 1 173 3.49E-46 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_804 37ddfcd34cdc40fb294a662160ec467d 178 Gene3D G3DSA:3.40.630.30 2 178 3.0E-43 T 14-10-2018 BD65_804 37ddfcd34cdc40fb294a662160ec467d 178 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 1.8E-31 T 14-10-2018 IPR000182 GNAT domain BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 Gene3D G3DSA:3.60.21.10 26 362 3.2E-132 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 9.2E-17 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 Gene3D G3DSA:3.90.780.10 363 549 2.8E-59 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 SUPERFAMILY SSF56300 27 360 2.37E-96 T 14-10-2018 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 SUPERFAMILY SSF55816 363 542 6.28E-52 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 508 6.3E-35 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 PRINTS PR01607 Apyrase family signature 207 224 1.8E-60 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 PRINTS PR01607 Apyrase family signature 283 303 1.8E-60 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 PRINTS PR01607 Apyrase family signature 238 261 1.8E-60 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 PRINTS PR01607 Apyrase family signature 32 50 1.8E-60 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 PRINTS PR01607 Apyrase family signature 417 440 1.8E-60 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_2878 a9d6bb6cfe1727b946d6592b2169e136 550 PRINTS PR01607 Apyrase family signature 484 503 1.8E-60 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_621 fd0786d8dfff208629a6e062ff266753 232 Gene3D G3DSA:3.30.2350.10 8 230 1.7E-61 T 14-10-2018 BD65_621 fd0786d8dfff208629a6e062ff266753 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_621 fd0786d8dfff208629a6e062ff266753 232 SUPERFAMILY SSF55120 11 227 3.68E-56 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_621 fd0786d8dfff208629a6e062ff266753 232 Pfam PF00849 RNA pseudouridylate synthase 25 181 1.6E-26 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 Gene3D G3DSA:3.30.300.20 278 346 1.6E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BD65_2354 7be96d80bd4a9048700017256f64e79b 495 SUPERFAMILY SSF47794 429 492 4.08E-17 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 Gene3D G3DSA:3.30.300.20 199 277 1.4E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BD65_2354 7be96d80bd4a9048700017256f64e79b 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 8.7E-9 T 14-10-2018 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.11 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 Gene3D G3DSA:1.10.150.20 431 490 2.6E-25 T 14-10-2018 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 SUPERFAMILY SSF50249 133 199 3.2E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2354 7be96d80bd4a9048700017256f64e79b 495 SMART SM00322 230 293 17.0 T 14-10-2018 IPR004087 K Homology domain GO:0003676 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 SMART SM00322 301 358 0.11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 Pfam PF13184 NusA-like KH domain 230 297 8.1E-28 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 7.5E-17 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication BD65_2354 7be96d80bd4a9048700017256f64e79b 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 6.6E-21 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication BD65_2354 7be96d80bd4a9048700017256f64e79b 495 SMART SM00316 133 200 1.8E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 Pfam PF08529 NusA N-terminal domain 4 123 1.2E-36 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 Gene3D G3DSA:3.30.1480.10 1 129 3.7E-46 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 SUPERFAMILY SSF69705 1 126 4.45E-42 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 SUPERFAMILY SSF54814 202 278 1.05E-28 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 Gene3D G3DSA:1.10.150.20 352 421 8.6E-31 T 14-10-2018 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 7.9E-131 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 SUPERFAMILY SSF54814 279 342 7.19E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 SUPERFAMILY SSF47794 355 415 2.67E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 BD65_2354 7be96d80bd4a9048700017256f64e79b 495 Gene3D G3DSA:2.40.50.140 135 198 1.1E-19 T 14-10-2018 BD65_434 3f092e3eb0b38ae526c06e532ff11942 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 60 4.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_434 3f092e3eb0b38ae526c06e532ff11942 200 SUPERFAMILY SSF46689 7 78 2.0E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_434 3f092e3eb0b38ae526c06e532ff11942 200 SUPERFAMILY SSF48498 85 196 5.48E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BD65_434 3f092e3eb0b38ae526c06e532ff11942 200 Gene3D G3DSA:1.10.357.10 3 199 1.3E-59 T 14-10-2018 BD65_434 3f092e3eb0b38ae526c06e532ff11942 200 Pfam PF16925 Bacterial transcriptional repressor C-terminal 87 187 3.3E-11 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 Gene3D G3DSA:1.10.1390.10 511 548 2.6E-20 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.561 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 SUPERFAMILY SSF53697 5 547 1.11E-226 T 14-10-2018 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 Gene3D G3DSA:3.40.50.10490 290 510 1.5E-111 T 14-10-2018 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 Gene3D G3DSA:3.40.50.10490 1 102 1.3E-34 T 14-10-2018 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 Pfam PF00342 Phosphoglucose isomerase 52 541 1.6E-253 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 1.2E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 1.2E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.2E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 1.2E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 1.2E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 1.2E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1595 3d77bd54dbc72816918f7c08d1a3514f 548 Gene3D G3DSA:3.40.50.10490 103 289 1.2E-90 T 14-10-2018 BD65_1034 27baeeed2daabf8cdc7aa18039ef2fb9 249 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 9 236 9.6E-79 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW BD65_1034 27baeeed2daabf8cdc7aa18039ef2fb9 249 Pfam PF13431 Tetratricopeptide repeat 90 122 1.5E-5 T 14-10-2018 BD65_1034 27baeeed2daabf8cdc7aa18039ef2fb9 249 SMART SM00028 67 100 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_1034 27baeeed2daabf8cdc7aa18039ef2fb9 249 SMART SM00028 137 170 2.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_1034 27baeeed2daabf8cdc7aa18039ef2fb9 249 SMART SM00028 33 66 0.047 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_1034 27baeeed2daabf8cdc7aa18039ef2fb9 249 Pfam PF13181 Tetratricopeptide repeat 36 66 0.042 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_1034 27baeeed2daabf8cdc7aa18039ef2fb9 249 SUPERFAMILY SSF48452 35 195 1.31E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1034 27baeeed2daabf8cdc7aa18039ef2fb9 249 Gene3D G3DSA:1.25.40.10 32 247 7.7E-39 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1287 855a0291a55df975dfc6aa41fe6bb277 241 Gene3D G3DSA:3.30.110.170 35 236 2.4E-50 T 14-10-2018 BD65_1287 855a0291a55df975dfc6aa41fe6bb277 241 Gene3D G3DSA:3.30.70.2970 44 151 2.4E-50 T 14-10-2018 BD65_1287 855a0291a55df975dfc6aa41fe6bb277 241 Pfam PF04402 Protein of unknown function (DUF541) 35 235 9.1E-45 T 14-10-2018 IPR007497 Protein of unknown function DUF541 BD65_3098 b23153835fbe1eadf187bcadabd963ce 179 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 9 137 1.0E-6 T 14-10-2018 BD65_3098 b23153835fbe1eadf187bcadabd963ce 179 Pfam PF01928 CYTH domain 9 173 8.9E-20 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BD65_3098 b23153835fbe1eadf187bcadabd963ce 179 Gene3D G3DSA:2.40.320.10 1 179 1.1E-45 T 14-10-2018 BD65_3098 b23153835fbe1eadf187bcadabd963ce 179 SUPERFAMILY SSF55154 9 177 1.39E-33 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 BD65_3098 b23153835fbe1eadf187bcadabd963ce 179 SMART SM01118 8 179 1.4E-9 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BD65_356 30bc80c0e9cff33a803bcc6faba4ebad 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 2.5E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_356 30bc80c0e9cff33a803bcc6faba4ebad 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 64 194 1.1E-17 T 14-10-2018 BD65_356 30bc80c0e9cff33a803bcc6faba4ebad 224 SUPERFAMILY SSF56784 2 222 3.71E-45 T 14-10-2018 IPR036412 HAD-like superfamily BD65_356 30bc80c0e9cff33a803bcc6faba4ebad 224 Gene3D G3DSA:1.10.150.240 16 95 7.8E-60 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BD65_356 30bc80c0e9cff33a803bcc6faba4ebad 224 Gene3D G3DSA:3.40.50.1000 5 218 7.8E-60 T 14-10-2018 IPR023214 HAD superfamily BD65_356 30bc80c0e9cff33a803bcc6faba4ebad 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 8.9E-74 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 BD65_86 ae43dfbdcc747de34c36252a8d47ac72 208 Gene3D G3DSA:1.10.3890.10 1 208 1.9E-78 T 14-10-2018 IPR035932 HflD-like superfamily BD65_86 ae43dfbdcc747de34c36252a8d47ac72 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 9.2E-76 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD BD65_86 ae43dfbdcc747de34c36252a8d47ac72 208 SUPERFAMILY SSF101322 2 207 2.35E-80 T 14-10-2018 IPR035932 HflD-like superfamily BD65_86 ae43dfbdcc747de34c36252a8d47ac72 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 36.091 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD BD65_86 ae43dfbdcc747de34c36252a8d47ac72 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 1.0E-86 T 14-10-2018 BD65_410 c4fb6c20ac95987b7c820af481f75c35 550 Gene3D G3DSA:3.40.190.10 223 531 5.0E-151 T 14-10-2018 BD65_410 c4fb6c20ac95987b7c820af481f75c35 550 SUPERFAMILY SSF53850 40 540 4.16E-137 T 14-10-2018 BD65_410 c4fb6c20ac95987b7c820af481f75c35 550 Gene3D G3DSA:3.90.76.10 50 222 5.0E-151 T 14-10-2018 BD65_410 c4fb6c20ac95987b7c820af481f75c35 550 Gene3D G3DSA:3.10.105.10 302 519 5.0E-151 T 14-10-2018 BD65_410 c4fb6c20ac95987b7c820af481f75c35 550 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 110 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site BD65_410 c4fb6c20ac95987b7c820af481f75c35 550 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 460 6.0E-88 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BD65_410 c4fb6c20ac95987b7c820af481f75c35 550 PIRSF PIRSF002741 1 544 4.4E-100 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BD65_2234 77aa579be87e58190b3b34d03c9259da 128 Gene3D G3DSA:3.90.1030.10 1 117 3.3E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2234 77aa579be87e58190b3b34d03c9259da 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.9E-51 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2234 77aa579be87e58190b3b34d03c9259da 128 SUPERFAMILY SSF64263 1 118 4.58E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2234 77aa579be87e58190b3b34d03c9259da 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2234 77aa579be87e58190b3b34d03c9259da 128 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2234 77aa579be87e58190b3b34d03c9259da 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1089 1742950befb10cf3c554435870a34efe 533 SUPERFAMILY SSF56425 238 353 1.64E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_1089 1742950befb10cf3c554435870a34efe 533 PIRSF PIRSF000171 339 531 1.6E-13 T 14-10-2018 BD65_1089 1742950befb10cf3c554435870a34efe 533 PIRSF PIRSF000171 1 250 6.9E-22 T 14-10-2018 BD65_1089 1742950befb10cf3c554435870a34efe 533 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 9 520 1.1E-222 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 BD65_1089 1742950befb10cf3c554435870a34efe 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 6.6E-10 T 14-10-2018 BD65_1089 1742950befb10cf3c554435870a34efe 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 6.6E-10 T 14-10-2018 BD65_1089 1742950befb10cf3c554435870a34efe 533 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 1.3E-14 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_1089 1742950befb10cf3c554435870a34efe 533 SUPERFAMILY SSF46977 425 525 1.44E-31 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_1089 1742950befb10cf3c554435870a34efe 533 Gene3D G3DSA:1.20.58.100 425 533 9.7E-46 T 14-10-2018 BD65_1089 1742950befb10cf3c554435870a34efe 533 Pfam PF00890 FAD binding domain 10 392 1.4E-99 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_1089 1742950befb10cf3c554435870a34efe 533 SUPERFAMILY SSF51905 7 447 9.18E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1089 1742950befb10cf3c554435870a34efe 533 Gene3D G3DSA:3.90.700.10 248 358 5.1E-153 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_1089 1742950befb10cf3c554435870a34efe 533 Gene3D G3DSA:3.50.50.60 10 404 5.1E-153 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_818 e0983e78c1d09be703a06a3d078ab5ca 320 SUPERFAMILY SSF48350 135 275 2.15E-6 T 14-10-2018 IPR008936 Rho GTPase activation protein GO:0007165 BD65_2524 a5a5bea583e224519ca42016a2107134 433 SUPERFAMILY SSF54534 283 385 3.47E-31 T 14-10-2018 BD65_2524 a5a5bea583e224519ca42016a2107134 433 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.0 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 BD65_2524 a5a5bea583e224519ca42016a2107134 433 Gene3D G3DSA:1.10.4030.10 21 148 6.3E-45 T 14-10-2018 BD65_2524 a5a5bea583e224519ca42016a2107134 433 Gene3D G3DSA:3.10.50.40 283 385 4.6E-85 T 14-10-2018 BD65_2524 a5a5bea583e224519ca42016a2107134 433 SUPERFAMILY SSF54534 173 277 7.85E-28 T 14-10-2018 BD65_2524 a5a5bea583e224519ca42016a2107134 433 Pfam PF09312 SurA N-terminal domain 25 142 3.6E-45 T 14-10-2018 IPR015391 SurA N-terminal BD65_2524 a5a5bea583e224519ca42016a2107134 433 SUPERFAMILY SSF109998 25 200 1.83E-44 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily BD65_2524 a5a5bea583e224519ca42016a2107134 433 Pfam PF00639 PPIC-type PPIASE domain 289 380 2.3E-23 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 BD65_2524 a5a5bea583e224519ca42016a2107134 433 Pfam PF00639 PPIC-type PPIASE domain 178 272 6.2E-20 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 BD65_2524 a5a5bea583e224519ca42016a2107134 433 Gene3D G3DSA:3.10.50.40 175 386 4.6E-85 T 14-10-2018 BD65_2625 37b6e24c85716c26cf5b322e364b7de5 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 3.7E-49 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 BD65_2625 37b6e24c85716c26cf5b322e364b7de5 244 SUPERFAMILY SSF52402 23 208 4.19E-53 T 14-10-2018 BD65_2625 37b6e24c85716c26cf5b322e364b7de5 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 22 242 4.4E-94 T 14-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 BD65_2625 37b6e24c85716c26cf5b322e364b7de5 244 PIRSF PIRSF000857 3 244 1.5E-55 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BD65_2625 37b6e24c85716c26cf5b322e364b7de5 244 Gene3D G3DSA:3.40.50.620 2 216 1.9E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2625 37b6e24c85716c26cf5b322e364b7de5 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.671 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BD65_2625 37b6e24c85716c26cf5b322e364b7de5 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 3.6E-89 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BD65_756 bdf88b88322b4c15fdacb20f50a59730 476 Gene3D G3DSA:2.30.30.450 213 353 1.0E-58 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily BD65_756 bdf88b88322b4c15fdacb20f50a59730 476 Pfam PF08411 Exonuclease C-terminal 211 472 3.8E-110 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 BD65_756 bdf88b88322b4c15fdacb20f50a59730 476 Gene3D G3DSA:1.20.1280.70 359 420 1.6E-27 T 14-10-2018 BD65_756 bdf88b88322b4c15fdacb20f50a59730 476 SMART SM00479 9 202 0.0022 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BD65_756 bdf88b88322b4c15fdacb20f50a59730 476 Pfam PF00929 Exonuclease 12 192 2.8E-27 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BD65_756 bdf88b88322b4c15fdacb20f50a59730 476 SUPERFAMILY SSF53098 9 474 4.1E-136 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_756 bdf88b88322b4c15fdacb20f50a59730 476 Gene3D G3DSA:3.30.420.10 1 200 1.5E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_756 bdf88b88322b4c15fdacb20f50a59730 476 PIRSF PIRSF000977 2 476 3.9E-207 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 BD65_2121 4babf68be75270734da7948123d3e4ac 815 PIRSF PIRSF000460 2 815 1.7E-228 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2121 4babf68be75270734da7948123d3e4ac 815 Gene3D G3DSA:3.40.50.2000 28 812 0.0 T 14-10-2018 BD65_2121 4babf68be75270734da7948123d3e4ac 815 Gene3D G3DSA:3.40.50.2000 468 795 0.0 T 14-10-2018 BD65_2121 4babf68be75270734da7948123d3e4ac 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2121 4babf68be75270734da7948123d3e4ac 815 SUPERFAMILY SSF53756 13 814 0.0 T 14-10-2018 BD65_2121 4babf68be75270734da7948123d3e4ac 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2121 4babf68be75270734da7948123d3e4ac 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2350 cee71d5fa88f6f042a0b3ec9f9eec420 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 2.3E-26 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BD65_2350 cee71d5fa88f6f042a0b3ec9f9eec420 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 5.1E-22 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BD65_2350 cee71d5fa88f6f042a0b3ec9f9eec420 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.1E-41 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BD65_2350 cee71d5fa88f6f042a0b3ec9f9eec420 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.1E-41 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BD65_2350 cee71d5fa88f6f042a0b3ec9f9eec420 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 1.1E-41 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BD65_2350 cee71d5fa88f6f042a0b3ec9f9eec420 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.1E-41 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BD65_1716 b4eecf580a2c5a6dd2a27efc1af52f60 130 Hamap MF_02018 PanD regulatory factor [panZ]. 1 130 33.257 T 14-10-2018 IPR032900 PanD regulatory factor PanZ GO:0015940|GO:0031638 BD65_1716 b4eecf580a2c5a6dd2a27efc1af52f60 130 Pfam PF12568 Acetyltransferase (GNAT) domain 2 129 3.5E-51 T 14-10-2018 IPR000182 GNAT domain BD65_1716 b4eecf580a2c5a6dd2a27efc1af52f60 130 SUPERFAMILY SSF55729 6 122 5.59E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_1716 b4eecf580a2c5a6dd2a27efc1af52f60 130 Gene3D G3DSA:3.40.630.30 1 130 8.6E-38 T 14-10-2018 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.193 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 Gene3D G3DSA:3.30.930.10 155 499 1.4E-135 T 14-10-2018 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 SUPERFAMILY SSF50249 13 155 3.43E-46 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 3.7E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 PIRSF PIRSF039101 1 505 1.5E-199 T 14-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 Gene3D G3DSA:2.40.50.140 15 154 1.1E-42 T 14-10-2018 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 SUPERFAMILY SSF55681 162 502 2.49E-124 T 14-10-2018 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 1.4E-229 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 6.1E-83 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.6E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.6E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.6E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.6E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_1262 f89b6801ecfd8a37a0b62e55962a418c 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.6E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_521 1218b1f2e4361866e0ae9f6ad5b08a6e 165 Pfam PF13185 GAF domain 39 146 1.0E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 BD65_521 1218b1f2e4361866e0ae9f6ad5b08a6e 165 SUPERFAMILY SSF55781 2 152 1.47E-40 T 14-10-2018 BD65_521 1218b1f2e4361866e0ae9f6ad5b08a6e 165 SMART SM00065 23 161 7.6E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 BD65_521 1218b1f2e4361866e0ae9f6ad5b08a6e 165 Gene3D G3DSA:3.30.450.40 1 165 8.5E-67 T 14-10-2018 IPR029016 GAF-like domain superfamily BD65_2736 64e504d09e172fb7959f7c261e539e4a 325 Gene3D G3DSA:3.30.2350.10 85 316 9.4E-71 T 14-10-2018 BD65_2736 64e504d09e172fb7959f7c261e539e4a 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 3.4E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2736 64e504d09e172fb7959f7c261e539e4a 325 SMART SM00363 18 83 4.2E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2736 64e504d09e172fb7959f7c261e539e4a 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 312 3.7E-107 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2736 64e504d09e172fb7959f7c261e539e4a 325 SUPERFAMILY SSF55174 17 69 7.57E-11 T 14-10-2018 BD65_2736 64e504d09e172fb7959f7c261e539e4a 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2736 64e504d09e172fb7959f7c261e539e4a 325 SUPERFAMILY SSF55120 77 320 3.7E-79 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2736 64e504d09e172fb7959f7c261e539e4a 325 Pfam PF01479 S4 domain 18 65 1.1E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2736 64e504d09e172fb7959f7c261e539e4a 325 Gene3D G3DSA:3.10.290.10 2 76 2.4E-25 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BD65_3194 d0d725f68299d93c485d5fdcc8b5c3fd 87 Pfam PF00462 Glutaredoxin 4 69 4.1E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BD65_3194 d0d725f68299d93c485d5fdcc8b5c3fd 87 PRINTS PR00160 Glutaredoxin signature 52 65 3.7E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup BD65_3194 d0d725f68299d93c485d5fdcc8b5c3fd 87 PRINTS PR00160 Glutaredoxin signature 66 79 3.7E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup BD65_3194 d0d725f68299d93c485d5fdcc8b5c3fd 87 PRINTS PR00160 Glutaredoxin signature 3 21 3.7E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup BD65_3194 d0d725f68299d93c485d5fdcc8b5c3fd 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 1.5E-48 T 14-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 BD65_3194 d0d725f68299d93c485d5fdcc8b5c3fd 87 SUPERFAMILY SSF52833 4 81 6.43E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_3194 d0d725f68299d93c485d5fdcc8b5c3fd 87 Gene3D G3DSA:3.40.30.10 3 85 4.6E-25 T 14-10-2018 BD65_3194 d0d725f68299d93c485d5fdcc8b5c3fd 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 BD65_3114 6bde20301e25dc8e370633a85bf7edc2 285 Pfam PF01385 Probable transposase 45 158 1.6E-26 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 BD65_3114 6bde20301e25dc8e370633a85bf7edc2 285 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 127 214 1.4E-9 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal BD65_3114 6bde20301e25dc8e370633a85bf7edc2 285 Pfam PF07282 Putative transposase DNA-binding domain 189 254 4.4E-23 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal BD65_1808 81a8d8af837735c0dd3f4132df4752ca 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 2 110 4.0E-36 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 BD65_1808 81a8d8af837735c0dd3f4132df4752ca 123 Pfam PF07226 Protein of unknown function (DUF1422) 2 114 2.4E-52 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 BD65_2317 311cfb93fb07c72c96868eb6aac631e5 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 5.6E-26 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BD65_2317 311cfb93fb07c72c96868eb6aac631e5 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 5 108 3.8E-23 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BD65_2317 311cfb93fb07c72c96868eb6aac631e5 206 Gene3D G3DSA:3.10.50.40 70 206 4.4E-49 T 14-10-2018 BD65_2317 311cfb93fb07c72c96868eb6aac631e5 206 SUPERFAMILY SSF54534 8 205 3.54E-54 T 14-10-2018 BD65_2317 311cfb93fb07c72c96868eb6aac631e5 206 Gene3D G3DSA:1.10.287.460 5 69 1.3E-18 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BD65_1316 c8fac6136037ba1d7242300cb9e77db8 376 Pfam PF04055 Radical SAM superfamily 11 179 4.6E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_1316 c8fac6136037ba1d7242300cb9e77db8 376 Gene3D G3DSA:3.80.30.20 2 291 3.7E-99 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BD65_1316 c8fac6136037ba1d7242300cb9e77db8 376 SMART SM00729 6 223 7.8E-50 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BD65_1316 c8fac6136037ba1d7242300cb9e77db8 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 9.4E-142 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 BD65_1316 c8fac6136037ba1d7242300cb9e77db8 376 SUPERFAMILY SSF102114 5 376 2.62E-109 T 14-10-2018 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 PIRSF PIRSF000101 4 569 8.9E-287 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 Gene3D G3DSA:3.30.70.610 269 344 2.2E-18 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 Gene3D G3DSA:3.30.70.610 361 434 8.8E-18 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 Gene3D G3DSA:3.30.1370.20 435 519 1.4E-39 T 14-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 Pfam PF01565 FAD binding domain 47 163 3.6E-7 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 10 568 57.937 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 1.2E-143 T 14-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 Gene3D G3DSA:3.30.465.10 106 268 1.2E-72 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 Gene3D G3DSA:3.30.43.10 2 103 9.4E-14 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 SUPERFAMILY SSF55103 276 567 2.4E-111 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BD65_3097 f3ce1ef06efa6b3c6613ffea5d20ff5f 569 SUPERFAMILY SSF56176 10 271 2.57E-69 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BD65_1230 fa7dea409fac9d33c47b87df17e80b7f 228 SUPERFAMILY SSF52980 10 227 1.13E-82 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BD65_1230 fa7dea409fac9d33c47b87df17e80b7f 228 SMART SM00927 59 157 1.0E-65 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 BD65_1230 fa7dea409fac9d33c47b87df17e80b7f 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 6.3E-34 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 BD65_1230 fa7dea409fac9d33c47b87df17e80b7f 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 154.218 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 BD65_1230 fa7dea409fac9d33c47b87df17e80b7f 228 Gene3D G3DSA:3.40.600.10 1 228 9.8E-55 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 BD65_1230 fa7dea409fac9d33c47b87df17e80b7f 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 1.4E-108 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 BD65_2847 fe2aa61581d4570aa9c26e4f15362461 429 TIGRFAM TIGR00836 amt: ammonium transporter 32 427 6.0E-139 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 BD65_2847 fe2aa61581d4570aa9c26e4f15362461 429 PRINTS PR00342 Rhesus blood group protein signature 127 143 5.0E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BD65_2847 fe2aa61581d4570aa9c26e4f15362461 429 PRINTS PR00342 Rhesus blood group protein signature 253 275 5.0E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BD65_2847 fe2aa61581d4570aa9c26e4f15362461 429 PRINTS PR00342 Rhesus blood group protein signature 308 326 5.0E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BD65_2847 fe2aa61581d4570aa9c26e4f15362461 429 PRINTS PR00342 Rhesus blood group protein signature 222 240 5.0E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BD65_2847 fe2aa61581d4570aa9c26e4f15362461 429 Pfam PF00909 Ammonium Transporter Family 34 427 1.4E-127 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BD65_2847 fe2aa61581d4570aa9c26e4f15362461 429 SUPERFAMILY SSF111352 28 408 6.15E-130 T 14-10-2018 BD65_2847 fe2aa61581d4570aa9c26e4f15362461 429 Gene3D G3DSA:1.10.3430.10 24 408 2.5E-147 T 14-10-2018 IPR029020 Ammonium/urea transporter BD65_2847 fe2aa61581d4570aa9c26e4f15362461 429 ProSitePatterns PS01219 Ammonium transporters signature. 183 208 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 BD65_2030 6aa2c761b106361a894b933cdd4d7a75 733 SUPERFAMILY SSF49695 44 128 8.67E-13 T 14-10-2018 IPR011024 Gamma-crystallin-like BD65_2030 6aa2c761b106361a894b933cdd4d7a75 733 Gene3D G3DSA:2.60.20.10 31 130 6.4E-20 T 14-10-2018 BD65_993 9495b2e986cca574bbba02aff0f69db0 235 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 8 233 1.6E-84 T 14-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 BD65_993 9495b2e986cca574bbba02aff0f69db0 235 SUPERFAMILY SSF52540 19 213 7.83E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_993 9495b2e986cca574bbba02aff0f69db0 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 133 160 7.5E-7 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BD65_993 9495b2e986cca574bbba02aff0f69db0 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 45 65 7.5E-7 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BD65_993 9495b2e986cca574bbba02aff0f69db0 235 Gene3D G3DSA:3.40.50.300 2 166 1.7E-35 T 14-10-2018 BD65_993 9495b2e986cca574bbba02aff0f69db0 235 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 7 235 58.562 T 14-10-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae BD65_993 9495b2e986cca574bbba02aff0f69db0 235 Gene3D G3DSA:1.10.8.60 169 235 2.5E-26 T 14-10-2018 BD65_993 9495b2e986cca574bbba02aff0f69db0 235 Pfam PF00308 Bacterial dnaA protein 18 214 1.9E-16 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA BD65_92 24c5d93ef895e693a771df9d95c4be33 247 Gene3D G3DSA:3.30.450.80 2 176 6.8E-51 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily BD65_92 24c5d93ef895e693a771df9d95c4be33 247 SUPERFAMILY SSF46894 180 242 6.12E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_92 24c5d93ef895e693a771df9d95c4be33 247 SMART SM00421 179 236 2.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_92 24c5d93ef895e693a771df9d95c4be33 247 Pfam PF03472 Autoinducer binding domain 13 157 1.1E-29 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain BD65_92 24c5d93ef895e693a771df9d95c4be33 247 SUPERFAMILY SSF75516 13 163 3.79E-37 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily BD65_92 24c5d93ef895e693a771df9d95c4be33 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 4.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_92 24c5d93ef895e693a771df9d95c4be33 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 4.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_92 24c5d93ef895e693a771df9d95c4be33 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 4.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_92 24c5d93ef895e693a771df9d95c4be33 247 Gene3D G3DSA:1.10.10.10 177 243 1.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_92 24c5d93ef895e693a771df9d95c4be33 247 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 235 9.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_996 83b8bccc20e74f4681b4046edce60dcd 347 SUPERFAMILY SSF55326 7 170 6.58E-53 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BD65_996 83b8bccc20e74f4681b4046edce60dcd 347 SUPERFAMILY SSF56042 171 339 1.0E-62 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BD65_996 83b8bccc20e74f4681b4046edce60dcd 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 345 47.267 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_996 83b8bccc20e74f4681b4046edce60dcd 347 Gene3D G3DSA:3.90.650.10 171 345 1.0E-70 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BD65_996 83b8bccc20e74f4681b4046edce60dcd 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 335 2.6E-37 T 14-10-2018 IPR010918 PurM-like, C-terminal domain BD65_996 83b8bccc20e74f4681b4046edce60dcd 347 Gene3D G3DSA:3.30.1330.10 6 170 6.9E-69 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BD65_996 83b8bccc20e74f4681b4046edce60dcd 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 2.6E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain BD65_996 83b8bccc20e74f4681b4046edce60dcd 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 3.2E-153 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BD65_1499 95e06294b928c87f596d22b2fe71b6b6 134 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 3.1E-50 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 BD65_1499 95e06294b928c87f596d22b2fe71b6b6 134 PIRSF PIRSF006318 1 134 5.0E-52 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 BD65_2293 b053f7098d8fe201c73f635508178681 313 Gene3D G3DSA:1.10.20.140 119 190 1.7E-106 T 14-10-2018 BD65_2293 b053f7098d8fe201c73f635508178681 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 30.046 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BD65_2293 b053f7098d8fe201c73f635508178681 313 SUPERFAMILY SSF52540 13 157 1.85E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2293 b053f7098d8fe201c73f635508178681 313 Gene3D G3DSA:3.40.50.300 16 296 1.7E-106 T 14-10-2018 BD65_2293 b053f7098d8fe201c73f635508178681 313 Pfam PF01715 IPP transferase 46 291 5.4E-86 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BD65_2293 b053f7098d8fe201c73f635508178681 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 299 3.2E-120 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 348 2.4E-118 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 789 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 PIRSF PIRSF000854 6 793 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 SUPERFAMILY SSF51621 467 789 1.23E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 784 5.2E-60 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 Gene3D G3DSA:3.30.1490.20 7 198 5.4E-71 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 Gene3D G3DSA:3.20.20.60 481 792 8.5E-101 T 14-10-2018 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 SUPERFAMILY SSF56059 9 388 3.41E-107 T 14-10-2018 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 7.5E-27 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 Gene3D G3DSA:3.50.30.10 360 467 1.3E-40 T 14-10-2018 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 Gene3D G3DSA:3.30.470.20 199 359 2.2E-59 T 14-10-2018 BD65_464 30f144e9ba4f3682eda9c5c5407a1425 794 SUPERFAMILY SSF52009 351 469 4.71E-36 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BD65_396 f5abad4646b6fc915071e0376325ecc9 324 SUPERFAMILY SSF51604 120 319 9.56E-51 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BD65_396 f5abad4646b6fc915071e0376325ecc9 324 SMART SM00922 130 223 8.6E-16 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BD65_396 f5abad4646b6fc915071e0376325ecc9 324 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 3 109 1.2E-14 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BD65_396 f5abad4646b6fc915071e0376325ecc9 324 SUPERFAMILY SSF54826 3 109 4.32E-28 T 14-10-2018 BD65_396 f5abad4646b6fc915071e0376325ecc9 324 Gene3D G3DSA:3.20.20.120 116 321 5.8E-55 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BD65_396 f5abad4646b6fc915071e0376325ecc9 324 Pfam PF13378 Enolase C-terminal domain-like 139 294 1.6E-23 T 14-10-2018 IPR029065 Enolase C-terminal domain-like BD65_396 f5abad4646b6fc915071e0376325ecc9 324 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 BD65_396 f5abad4646b6fc915071e0376325ecc9 324 Gene3D G3DSA:3.30.390.10 1 103 7.3E-28 T 14-10-2018 IPR029017 Enolase-like, N-terminal BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 Gene3D G3DSA:2.60.40.10 20 137 1.3E-41 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 Gene3D G3DSA:2.60.40.10 138 219 2.7E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 PRINTS PR00969 Pili chaperone signature 21 30 1.1E-36 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 PRINTS PR00969 Pili chaperone signature 118 133 1.1E-36 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 PRINTS PR00969 Pili chaperone signature 153 168 1.1E-36 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 PRINTS PR00969 Pili chaperone signature 94 111 1.1E-36 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 PRINTS PR00969 Pili chaperone signature 66 87 1.1E-36 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 137 2.1E-41 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 158 214 3.8E-10 T 14-10-2018 IPR016148 Pili assembly chaperone, C-terminal BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 93 110 - T 14-10-2018 IPR018046 Pili assembly chaperone, conserved site BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 SUPERFAMILY SSF49584 137 217 6.67E-20 T 14-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BD65_2007 21ec1cd431355822d5a6e82ec7e0d2fa 222 SUPERFAMILY SSF49354 16 136 3.14E-41 T 14-10-2018 IPR008962 PapD-like superfamily BD65_1838 4bee857c8e3e1a8b2a1d3c2b23aca98f 732 Pfam PF00270 DEAD/DEAH box helicase 203 364 6.7E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_1838 4bee857c8e3e1a8b2a1d3c2b23aca98f 732 SMART SM00487 195 391 6.0E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_1838 4bee857c8e3e1a8b2a1d3c2b23aca98f 732 SMART SM00490 492 589 9.2E-9 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1838 4bee857c8e3e1a8b2a1d3c2b23aca98f 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.475 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BD65_1838 4bee857c8e3e1a8b2a1d3c2b23aca98f 732 Gene3D G3DSA:3.40.50.300 184 379 6.3E-82 T 14-10-2018 BD65_1838 4bee857c8e3e1a8b2a1d3c2b23aca98f 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 1.6E-204 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BD65_1838 4bee857c8e3e1a8b2a1d3c2b23aca98f 732 Gene3D G3DSA:1.10.8.630 2 113 1.7E-35 T 14-10-2018 BD65_1838 4bee857c8e3e1a8b2a1d3c2b23aca98f 732 Pfam PF00271 Helicase conserved C-terminal domain 520 589 7.8E-6 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1838 4bee857c8e3e1a8b2a1d3c2b23aca98f 732 SUPERFAMILY SSF52540 220 601 2.09E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_7 61fd4f50870ca0b4e6cf28bc65bb2e77 412 Pfam PF04403 Paraquat-inducible protein A 243 399 1.5E-52 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like BD65_7 61fd4f50870ca0b4e6cf28bc65bb2e77 412 Pfam PF04403 Paraquat-inducible protein A 40 190 9.3E-37 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like BD65_7 61fd4f50870ca0b4e6cf28bc65bb2e77 412 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 2 398 1.8E-151 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type BD65_1126 a6583f6f6947e2ebf61a1c4272fd092a 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 9.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1126 a6583f6f6947e2ebf61a1c4272fd092a 306 Gene3D G3DSA:1.10.10.10 7 95 4.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1126 a6583f6f6947e2ebf61a1c4272fd092a 306 SUPERFAMILY SSF46785 9 92 7.79E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1126 a6583f6f6947e2ebf61a1c4272fd092a 306 Pfam PF03466 LysR substrate binding domain 92 297 1.9E-45 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1126 a6583f6f6947e2ebf61a1c4272fd092a 306 Gene3D G3DSA:3.40.190.290 96 299 3.3E-62 T 14-10-2018 BD65_1126 a6583f6f6947e2ebf61a1c4272fd092a 306 SUPERFAMILY SSF53850 92 302 1.01E-46 T 14-10-2018 BD65_2967 d6cba95fcd0df0ebb8cc52014b9b1df5 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 1.2E-46 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BD65_2967 d6cba95fcd0df0ebb8cc52014b9b1df5 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 6.7E-82 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BD65_2967 d6cba95fcd0df0ebb8cc52014b9b1df5 156 PIRSF PIRSF004505 1 155 2.2E-40 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BD65_2967 d6cba95fcd0df0ebb8cc52014b9b1df5 156 SUPERFAMILY SSF75217 2 154 1.2E-48 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BD65_2967 d6cba95fcd0df0ebb8cc52014b9b1df5 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.24 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BD65_2967 d6cba95fcd0df0ebb8cc52014b9b1df5 156 Gene3D G3DSA:3.40.1280.10 1 156 2.3E-51 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BD65_2522 83a538078d08fd4a88668cc3d7006cd8 271 SUPERFAMILY SSF53335 17 265 3.1E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2522 83a538078d08fd4a88668cc3d7006cd8 271 Gene3D G3DSA:3.40.50.150 1 200 2.6E-66 T 14-10-2018 BD65_2522 83a538078d08fd4a88668cc3d7006cd8 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 BD65_2522 83a538078d08fd4a88668cc3d7006cd8 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 264 4.8E-79 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BD65_2522 83a538078d08fd4a88668cc3d7006cd8 271 Gene3D G3DSA:1.10.8.100 201 268 5.3E-28 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 BD65_2522 83a538078d08fd4a88668cc3d7006cd8 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.29 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BD65_2522 83a538078d08fd4a88668cc3d7006cd8 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 5.1E-88 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BD65_2522 83a538078d08fd4a88668cc3d7006cd8 271 SMART SM00650 25 198 9.7E-83 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 SUPERFAMILY SSF158791 60 169 2.22E-22 T 14-10-2018 BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 SUPERFAMILY SSF161093 315 488 8.63E-46 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 Pfam PF00571 CBS domain 238 292 1.0E-5 T 14-10-2018 IPR000644 CBS domain BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 SMART SM00924 71 174 1.5E-29 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 Pfam PF01769 Divalent cation transporter 358 481 1.2E-22 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 Gene3D G3DSA:1.10.357.20 313 489 6.9E-45 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 Pfam PF03448 MgtE intracellular N domain 71 171 1.2E-21 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 SUPERFAMILY SSF54631 173 312 1.97E-24 T 14-10-2018 BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 Gene3D G3DSA:3.10.580.10 171 297 1.1E-38 T 14-10-2018 BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 TIGRFAM TIGR00400 mgtE: magnesium transporter 60 488 3.4E-76 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 BD65_1005 27e154086bb41a67945e58cf5a1d499a 489 Gene3D G3DSA:1.25.60.10 50 169 1.9E-15 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily BD65_1805 d2d9d2022868f4a790a2a177c2993386 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BD65_1805 d2d9d2022868f4a790a2a177c2993386 287 Gene3D G3DSA:3.40.50.1860 30 265 1.1E-92 T 14-10-2018 BD65_1805 d2d9d2022868f4a790a2a177c2993386 287 Gene3D G3DSA:3.40.50.1860 118 231 1.1E-92 T 14-10-2018 BD65_1805 d2d9d2022868f4a790a2a177c2993386 287 Hamap MF_00258 Glutamate racemase [murI]. 26 278 33.599 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BD65_1805 d2d9d2022868f4a790a2a177c2993386 287 SUPERFAMILY SSF53681 29 129 1.5E-31 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BD65_1805 d2d9d2022868f4a790a2a177c2993386 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 29 272 6.2E-86 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BD65_1805 d2d9d2022868f4a790a2a177c2993386 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 31 239 4.7E-25 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BD65_1805 d2d9d2022868f4a790a2a177c2993386 287 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 204 214 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BD65_1805 d2d9d2022868f4a790a2a177c2993386 287 SUPERFAMILY SSF53681 131 248 2.83E-32 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BD65_2488 331da1e5d51e161d8cb136add89cb235 288 Pfam PF12833 Helix-turn-helix domain 27 105 1.6E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_2488 331da1e5d51e161d8cb136add89cb235 288 SMART SM00342 21 104 5.4E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_2488 331da1e5d51e161d8cb136add89cb235 288 SUPERFAMILY SSF46689 57 107 5.82E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2488 331da1e5d51e161d8cb136add89cb235 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_2488 331da1e5d51e161d8cb136add89cb235 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_2488 331da1e5d51e161d8cb136add89cb235 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BD65_2488 331da1e5d51e161d8cb136add89cb235 288 Pfam PF06445 GyrI-like small molecule binding domain 128 287 6.1E-25 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain BD65_2488 331da1e5d51e161d8cb136add89cb235 288 Gene3D G3DSA:3.20.80.10 122 288 7.5E-50 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BD65_2488 331da1e5d51e161d8cb136add89cb235 288 SMART SM00871 126 287 5.0E-20 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding BD65_2488 331da1e5d51e161d8cb136add89cb235 288 SUPERFAMILY SSF55136 123 287 1.03E-55 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BD65_2488 331da1e5d51e161d8cb136add89cb235 288 Gene3D G3DSA:1.10.10.60 56 121 2.2E-20 T 14-10-2018 BD65_2488 331da1e5d51e161d8cb136add89cb235 288 SUPERFAMILY SSF46689 6 55 5.78E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2488 331da1e5d51e161d8cb136add89cb235 288 Gene3D G3DSA:1.10.10.60 3 55 1.8E-27 T 14-10-2018 BD65_2754 1b47465d0710fca7a97dbead276f3d16 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 5.2E-11 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BD65_2754 1b47465d0710fca7a97dbead276f3d16 815 Gene3D G3DSA:2.40.110.10 236 359 4.0E-100 T 14-10-2018 BD65_2754 1b47465d0710fca7a97dbead276f3d16 815 SUPERFAMILY SSF47203 360 507 3.87E-20 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BD65_2754 1b47465d0710fca7a97dbead276f3d16 815 Gene3D G3DSA:1.20.140.10 360 507 4.0E-100 T 14-10-2018 BD65_2754 1b47465d0710fca7a97dbead276f3d16 815 Gene3D G3DSA:1.10.540.10 122 235 4.0E-100 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BD65_2754 1b47465d0710fca7a97dbead276f3d16 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 1.7E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BD65_2754 1b47465d0710fca7a97dbead276f3d16 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 9.1E-9 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BD65_2754 1b47465d0710fca7a97dbead276f3d16 815 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 6.5E-118 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 BD65_2754 1b47465d0710fca7a97dbead276f3d16 815 SUPERFAMILY SSF56645 119 355 3.93E-45 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BD65_1677 61d7a91b095668859bafa05deccf674d 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BD65_1677 61d7a91b095668859bafa05deccf674d 387 Gene3D G3DSA:3.40.47.10 134 381 4.6E-152 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_1677 61d7a91b095668859bafa05deccf674d 387 Gene3D G3DSA:3.40.47.10 4 267 4.6E-152 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_1677 61d7a91b095668859bafa05deccf674d 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.6E-143 T 14-10-2018 IPR002155 Thiolase GO:0016747 BD65_1677 61d7a91b095668859bafa05deccf674d 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.248 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BD65_1677 61d7a91b095668859bafa05deccf674d 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 9.3E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BD65_1677 61d7a91b095668859bafa05deccf674d 387 SUPERFAMILY SSF53901 1 258 3.51E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_1677 61d7a91b095668859bafa05deccf674d 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 1.3E-50 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BD65_1677 61d7a91b095668859bafa05deccf674d 387 SUPERFAMILY SSF53901 262 386 1.46E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BD65_1677 61d7a91b095668859bafa05deccf674d 387 PIRSF PIRSF000429 1 387 9.9E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 BD65_1677 61d7a91b095668859bafa05deccf674d 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 3.2E-227 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BD65_1677 61d7a91b095668859bafa05deccf674d 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 BD65_1677 61d7a91b095668859bafa05deccf674d 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BD65_1459 5c8b1e44473d611f4d17eed0c5a271c0 811 Pfam PF03797 Autotransporter beta-domain 534 789 3.9E-35 T 14-10-2018 IPR005546 Autotransporter beta-domain BD65_1459 5c8b1e44473d611f4d17eed0c5a271c0 811 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 247 276 2.3E-6 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat BD65_1459 5c8b1e44473d611f4d17eed0c5a271c0 811 Gene3D G3DSA:2.160.20.20 85 476 1.1E-31 T 14-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily BD65_1459 5c8b1e44473d611f4d17eed0c5a271c0 811 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 365 811 8.5E-80 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 BD65_1459 5c8b1e44473d611f4d17eed0c5a271c0 811 Gene3D G3DSA:2.40.128.130 489 811 5.2E-76 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily BD65_1459 5c8b1e44473d611f4d17eed0c5a271c0 811 SUPERFAMILY SSF51126 85 474 2.51E-33 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor BD65_1459 5c8b1e44473d611f4d17eed0c5a271c0 811 SMART SM00869 531 800 1.7E-24 T 14-10-2018 IPR005546 Autotransporter beta-domain BD65_1459 5c8b1e44473d611f4d17eed0c5a271c0 811 SUPERFAMILY SSF103515 492 811 6.28E-37 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily BD65_2510 eff3450f2691b02ecfa05c22446326e7 317 Gene3D G3DSA:3.40.1010.20 98 197 6.9E-112 T 14-10-2018 BD65_2510 eff3450f2691b02ecfa05c22446326e7 317 Gene3D G3DSA:3.40.50.11270 12 97 6.9E-112 T 14-10-2018 BD65_2510 eff3450f2691b02ecfa05c22446326e7 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 2.0E-100 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BD65_2510 eff3450f2691b02ecfa05c22446326e7 317 Pfam PF02401 LytB protein 3 283 3.5E-93 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BD65_2510 eff3450f2691b02ecfa05c22446326e7 317 Gene3D G3DSA:3.40.1010.20 6 283 6.9E-112 T 14-10-2018 BD65_2510 eff3450f2691b02ecfa05c22446326e7 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 36.92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BD65_956 5041e89451aef5db0c5dff0447d7056b 160 Pfam PF04074 Domain of unknown function (DUF386) 1 150 3.9E-42 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family BD65_956 5041e89451aef5db0c5dff0447d7056b 160 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 8.5E-46 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family BD65_956 5041e89451aef5db0c5dff0447d7056b 160 SUPERFAMILY SSF51197 1 153 5.22E-46 T 14-10-2018 BD65_956 5041e89451aef5db0c5dff0447d7056b 160 Gene3D G3DSA:2.60.120.370 1 154 7.5E-45 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily BD65_1246 1734f974b80215f273eba35932c85cd1 204 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 4.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_1246 1734f974b80215f273eba35932c85cd1 204 Gene3D G3DSA:3.10.610.10 39 140 9.2E-16 T 14-10-2018 BD65_1246 1734f974b80215f273eba35932c85cd1 204 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 7 199 3.7E-38 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 BD65_1246 1734f974b80215f273eba35932c85cd1 204 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 8.6E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_1246 1734f974b80215f273eba35932c85cd1 204 SUPERFAMILY SSF54523 47 200 1.88E-31 T 14-10-2018 BD65_1246 1734f974b80215f273eba35932c85cd1 204 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_1246 1734f974b80215f273eba35932c85cd1 204 Pfam PF11612 Type II secretion system (T2SS), protein J 59 197 1.5E-20 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 BD65_798 1ddc8d7bf86cb00d39c8f75cfb519f42 179 SUPERFAMILY SSF53597 6 175 9.69E-31 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BD65_798 1ddc8d7bf86cb00d39c8f75cfb519f42 179 Pfam PF01872 RibD C-terminal domain 6 170 5.1E-13 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BD65_798 1ddc8d7bf86cb00d39c8f75cfb519f42 179 Gene3D G3DSA:3.40.430.10 5 175 8.2E-43 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BD65_2480 334f27166bc7bfc0bd265df9d9dffe0a 325 SUPERFAMILY SSF56784 111 316 6.54E-48 T 14-10-2018 IPR036412 HAD-like superfamily BD65_2480 334f27166bc7bfc0bd265df9d9dffe0a 325 Gene3D G3DSA:3.30.70.2020 38 320 3.8E-117 T 14-10-2018 BD65_2480 334f27166bc7bfc0bd265df9d9dffe0a 325 Gene3D G3DSA:3.40.50.1000 107 316 3.8E-117 T 14-10-2018 IPR023214 HAD superfamily BD65_2480 334f27166bc7bfc0bd265df9d9dffe0a 325 Pfam PF12710 haloacid dehalogenase-like hydrolase 148 281 3.7E-15 T 14-10-2018 BD65_2480 334f27166bc7bfc0bd265df9d9dffe0a 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 9.6E-88 T 14-10-2018 BD65_2480 334f27166bc7bfc0bd265df9d9dffe0a 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 2.2E-24 T 14-10-2018 BD65_2480 334f27166bc7bfc0bd265df9d9dffe0a 325 Gene3D G3DSA:1.10.150.210 121 183 3.8E-117 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 BD65_1318 c74de5dd687135de44432e3bf2a2a084 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 6.8E-132 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BD65_1318 c74de5dd687135de44432e3bf2a2a084 308 Pfam PF04960 Glutaminase 24 308 1.5E-113 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BD65_1318 c74de5dd687135de44432e3bf2a2a084 308 SUPERFAMILY SSF56601 7 308 8.83E-116 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_1318 c74de5dd687135de44432e3bf2a2a084 308 Gene3D G3DSA:3.40.710.10 3 308 1.4E-111 T 14-10-2018 BD65_1318 c74de5dd687135de44432e3bf2a2a084 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 46.627 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 Pfam PF01493 GXGXG motif 1235 1418 2.1E-77 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 Pfam PF01645 Conserved region in glutamate synthase 792 1155 2.0E-157 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 Gene3D G3DSA:3.20.20.70 429 791 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 Gene3D G3DSA:2.160.20.60 1196 1467 2.1E-103 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 Pfam PF04898 Glutamate synthase central domain 456 736 3.7E-104 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 SUPERFAMILY SSF51395 433 1189 5.7E-251 T 14-10-2018 BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 SUPERFAMILY SSF56235 12 428 1.2E-149 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 Gene3D G3DSA:3.20.20.70 482 1168 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 Pfam PF00310 Glutamine amidotransferases class-II 12 424 1.7E-175 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 Gene3D G3DSA:3.60.20.10 12 544 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_1489 f758a645d0606b9ddff81e893d18d652 1485 SUPERFAMILY SSF69336 1211 1464 9.29E-89 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 SUPERFAMILY SSF51395 2 367 1.03E-110 T 14-10-2018 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 SUPERFAMILY SSF51971 334 521 2.12E-39 T 14-10-2018 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 644 2.2E-22 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 2.4E-5 T 14-10-2018 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 2.4E-5 T 14-10-2018 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 SUPERFAMILY SSF51905 461 651 5.3E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 Gene3D G3DSA:3.40.50.720 376 667 1.0E-118 T 14-10-2018 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 1.6E-89 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 2.0E-12 T 14-10-2018 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 2.0E-12 T 14-10-2018 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 2.0E-12 T 14-10-2018 BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 Gene3D G3DSA:3.50.50.60 470 626 1.0E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1457 bdf1fb9df3a1d100cd46797167a662d2 673 Gene3D G3DSA:3.20.20.70 3 370 3.6E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1875 7c0fec0d185181301bc494506a1c7d5d 73 Pfam PF16080 Bacteriophage holin family HP1 6 59 4.0E-16 T 14-10-2018 IPR032118 Bacteriophage holin HP1 family BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Hamap MF_01687 Beta-galactosidase [lacZ]. 1 1033 17.318 T 14-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Gene3D G3DSA:2.70.98.10 743 1032 1.3E-89 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Gene3D G3DSA:2.60.120.260 1 214 6.6E-78 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 SUPERFAMILY SSF74650 747 1030 4.87E-94 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Gene3D G3DSA:2.60.40.10 626 732 2.0E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 SUPERFAMILY SSF51445 336 625 5.76E-101 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Gene3D G3DSA:2.60.40.10 215 334 2.4E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 336 629 1.6E-111 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Pfam PF00703 Glycosyl hydrolases family 2 217 334 6.4E-9 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 386 411 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Pfam PF16353 Domain of unknown function(DUF4981) 640 728 6.6E-17 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 214 2.2E-62 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Pfam PF02929 Beta galactosidase small chain 762 1028 8.8E-61 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 448 462 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 Gene3D G3DSA:3.20.20.80 335 624 2.5E-124 T 14-10-2018 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 PRINTS PR00132 Glycosyl hydrolase family 2 signature 376 394 9.9E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 PRINTS PR00132 Glycosyl hydrolase family 2 signature 142 157 9.9E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 PRINTS PR00132 Glycosyl hydrolase family 2 signature 448 463 9.9E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 PRINTS PR00132 Glycosyl hydrolase family 2 signature 532 547 9.9E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 PRINTS PR00132 Glycosyl hydrolase family 2 signature 345 359 9.9E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 SMART SM01038 758 1031 1.2E-116 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 SUPERFAMILY SSF49303 216 334 8.63E-20 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 SUPERFAMILY SSF49785 10 214 8.79E-65 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BD65_725 5c6c38a0cf515410f1ce7cdd1db069c7 1036 SUPERFAMILY SSF49303 623 729 1.08E-27 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BD65_2572 9675e8f1a2651cbc9e6eac258108614b 526 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 342 356 - T 14-10-2018 IPR001482 Type II/IV secretion system protein BD65_2572 9675e8f1a2651cbc9e6eac258108614b 526 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 34 93 1.6E-6 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal BD65_2572 9675e8f1a2651cbc9e6eac258108614b 526 SUPERFAMILY SSF160246 33 90 3.14E-8 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BD65_2572 9675e8f1a2651cbc9e6eac258108614b 526 Gene3D G3DSA:3.30.450.90 112 248 9.5E-43 T 14-10-2018 BD65_2572 9675e8f1a2651cbc9e6eac258108614b 526 Gene3D G3DSA:3.40.50.300 249 520 1.4E-98 T 14-10-2018 BD65_2572 9675e8f1a2651cbc9e6eac258108614b 526 Pfam PF00437 Type II/IV secretion system protein 152 414 5.8E-79 T 14-10-2018 IPR001482 Type II/IV secretion system protein BD65_2572 9675e8f1a2651cbc9e6eac258108614b 526 SUPERFAMILY SSF52540 136 515 5.77E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_710 a8587aee701eb671e4cc53c299dadd09 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.447 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BD65_710 a8587aee701eb671e4cc53c299dadd09 349 SUPERFAMILY SSF52172 1 108 9.53E-28 T 14-10-2018 IPR011006 CheY-like superfamily BD65_710 a8587aee701eb671e4cc53c299dadd09 349 SMART SM00448 4 119 5.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_710 a8587aee701eb671e4cc53c299dadd09 349 Gene3D G3DSA:3.40.50.180 148 349 1.7E-84 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal BD65_710 a8587aee701eb671e4cc53c299dadd09 349 Gene3D G3DSA:3.40.50.2300 1 133 2.7E-31 T 14-10-2018 BD65_710 a8587aee701eb671e4cc53c299dadd09 349 Pfam PF01339 CheB methylesterase 159 336 1.9E-63 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BD65_710 a8587aee701eb671e4cc53c299dadd09 349 SUPERFAMILY SSF52738 156 343 6.02E-76 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal BD65_710 a8587aee701eb671e4cc53c299dadd09 349 Pfam PF00072 Response regulator receiver domain 6 109 3.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_710 a8587aee701eb671e4cc53c299dadd09 349 PIRSF PIRSF000876 1 346 2.7E-138 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BD65_919 70882c222d5e7a855eeac4702408a4bc 174 SUPERFAMILY SSF81342 3 174 2.35E-27 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BD65_919 70882c222d5e7a855eeac4702408a4bc 174 Pfam PF01292 Prokaryotic cytochrome b561 4 173 1.2E-21 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BD65_2551 809ec417c1278da3630709fd3c82ddba 495 Gene3D G3DSA:3.40.1390.10 2 104 6.8E-33 T 14-10-2018 BD65_2551 809ec417c1278da3630709fd3c82ddba 495 SUPERFAMILY SSF53623 105 338 3.4E-76 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_2551 809ec417c1278da3630709fd3c82ddba 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.576 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BD65_2551 809ec417c1278da3630709fd3c82ddba 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 4.8E-26 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BD65_2551 809ec417c1278da3630709fd3c82ddba 495 Gene3D G3DSA:3.90.190.20 342 494 3.3E-55 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_2551 809ec417c1278da3630709fd3c82ddba 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 2.3E-12 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BD65_2551 809ec417c1278da3630709fd3c82ddba 495 Gene3D G3DSA:3.40.1190.10 105 341 1.1E-87 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_2551 809ec417c1278da3630709fd3c82ddba 495 SUPERFAMILY SSF53244 339 491 3.97E-51 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_2551 809ec417c1278da3630709fd3c82ddba 495 SUPERFAMILY SSF63418 5 103 1.83E-24 T 14-10-2018 IPR035911 MurE/MurF, N-terminal BD65_2551 809ec417c1278da3630709fd3c82ddba 495 Pfam PF08245 Mur ligase middle domain 114 317 1.9E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BD65_2551 809ec417c1278da3630709fd3c82ddba 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 3.2E-165 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BD65_2592 8ba09f297ea5def29137f75bbf24963b 218 SMART SM00947 30 192 4.2E-65 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BD65_2592 8ba09f297ea5def29137f75bbf24963b 218 Pfam PF00484 Carbonic anhydrase 38 187 6.3E-50 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BD65_2592 8ba09f297ea5def29137f75bbf24963b 218 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BD65_2592 8ba09f297ea5def29137f75bbf24963b 218 SUPERFAMILY SSF53056 1 211 7.59E-74 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BD65_2592 8ba09f297ea5def29137f75bbf24963b 218 Gene3D G3DSA:3.40.1050.10 1 217 1.6E-85 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BD65_2592 8ba09f297ea5def29137f75bbf24963b 218 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BD65_1848 073155cbe9d12b86d8691644d62a8055 336 PIRSF PIRSF004532 1 332 4.6E-140 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BD65_1848 073155cbe9d12b86d8691644d62a8055 336 Gene3D G3DSA:3.30.540.10 7 320 6.5E-131 T 14-10-2018 BD65_1848 073155cbe9d12b86d8691644d62a8055 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 1.8E-133 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BD65_1848 073155cbe9d12b86d8691644d62a8055 336 SUPERFAMILY SSF56655 1 325 2.01E-110 T 14-10-2018 BD65_1848 073155cbe9d12b86d8691644d62a8055 336 Gene3D G3DSA:3.40.190.90 110 277 6.5E-131 T 14-10-2018 BD65_1848 073155cbe9d12b86d8691644d62a8055 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 328 8.0E-175 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BD65_1350 8cf04e6ada7bbf108a0e8ac5af7a69a0 439 Gene3D G3DSA:3.40.50.1820 167 434 5.0E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1350 8cf04e6ada7bbf108a0e8ac5af7a69a0 439 SUPERFAMILY SSF53474 190 428 2.28E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1350 8cf04e6ada7bbf108a0e8ac5af7a69a0 439 Pfam PF00756 Putative esterase 198 425 7.0E-36 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BD65_1350 8cf04e6ada7bbf108a0e8ac5af7a69a0 439 SUPERFAMILY SSF81296 17 167 1.68E-41 T 14-10-2018 IPR014756 Immunoglobulin E-set BD65_1350 8cf04e6ada7bbf108a0e8ac5af7a69a0 439 Gene3D G3DSA:2.60.40.10 11 164 2.4E-48 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_1350 8cf04e6ada7bbf108a0e8ac5af7a69a0 439 Pfam PF11806 Domain of unknown function (DUF3327) 46 175 1.2E-36 T 14-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 BD65_1497 aa6e25880457ff87d33c62eb58254502 142 PIRSF PIRSF002181 1 142 3.3E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BD65_1497 aa6e25880457ff87d33c62eb58254502 142 Gene3D G3DSA:3.90.1180.10 1 142 1.0E-64 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BD65_1497 aa6e25880457ff87d33c62eb58254502 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.0E-67 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1497 aa6e25880457ff87d33c62eb58254502 142 Pfam PF00572 Ribosomal protein L13 15 138 2.2E-56 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BD65_1497 aa6e25880457ff87d33c62eb58254502 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 BD65_1497 aa6e25880457ff87d33c62eb58254502 142 SUPERFAMILY SSF52161 1 140 3.27E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BD65_1497 aa6e25880457ff87d33c62eb58254502 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.577 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BD65_2280 5386a9b03a5459847a111225d38d9798 325 SUPERFAMILY SSF55681 13 323 9.96E-83 T 14-10-2018 BD65_2280 5386a9b03a5459847a111225d38d9798 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 5.0E-130 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BD65_2280 5386a9b03a5459847a111225d38d9798 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.847 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BD65_2280 5386a9b03a5459847a111225d38d9798 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 322 4.1E-47 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2280 5386a9b03a5459847a111225d38d9798 325 Gene3D G3DSA:3.30.930.10 1 325 2.9E-123 T 14-10-2018 BD65_2280 5386a9b03a5459847a111225d38d9798 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 6.2E-6 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_2280 5386a9b03a5459847a111225d38d9798 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 6.2E-6 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_680 14d256bd8de380f2ad00959f15f8304e 148 PRINTS PR01004 Flagellar FliJ protein signature 108 126 2.7E-42 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BD65_680 14d256bd8de380f2ad00959f15f8304e 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 2.7E-42 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BD65_680 14d256bd8de380f2ad00959f15f8304e 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 2.7E-42 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BD65_680 14d256bd8de380f2ad00959f15f8304e 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 2.7E-42 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BD65_680 14d256bd8de380f2ad00959f15f8304e 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 2.7E-42 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BD65_680 14d256bd8de380f2ad00959f15f8304e 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 2.7E-42 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BD65_680 14d256bd8de380f2ad00959f15f8304e 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 2.7E-42 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BD65_680 14d256bd8de380f2ad00959f15f8304e 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 1.0E-31 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BD65_680 14d256bd8de380f2ad00959f15f8304e 148 PIRSF PIRSF019404 1 148 1.4E-50 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BD65_680 14d256bd8de380f2ad00959f15f8304e 148 Pfam PF02050 Flagellar FliJ protein 19 141 9.0E-35 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BD65_220 883464cf937396f3dc7adae34133ec43 261 Gene3D G3DSA:3.30.1330.80 106 228 6.7E-82 T 14-10-2018 BD65_220 883464cf937396f3dc7adae34133ec43 261 Gene3D G3DSA:3.30.1330.80 31 247 6.7E-82 T 14-10-2018 BD65_220 883464cf937396f3dc7adae34133ec43 261 Pfam PF03306 Alpha-acetolactate decarboxylase 31 247 2.5E-85 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 BD65_220 883464cf937396f3dc7adae34133ec43 261 SUPERFAMILY SSF117856 30 260 7.32E-84 T 14-10-2018 BD65_220 883464cf937396f3dc7adae34133ec43 261 PIRSF PIRSF001332 14 261 1.4E-95 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 BD65_220 883464cf937396f3dc7adae34133ec43 261 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 30 258 8.5E-92 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 BD65_23 6da5c3203ba697fc9b4f21cd2ca3f363 105 SUPERFAMILY SSF141255 4 96 3.92E-29 T 14-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 BD65_23 6da5c3203ba697fc9b4f21cd2ca3f363 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 3.1E-32 T 14-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 BD65_23 6da5c3203ba697fc9b4f21cd2ca3f363 105 Gene3D G3DSA:2.30.30.390 1 105 1.7E-38 T 14-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 BD65_23 6da5c3203ba697fc9b4f21cd2ca3f363 105 SMART SM00992 3 102 1.0E-33 T 14-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 BD65_23 6da5c3203ba697fc9b4f21cd2ca3f363 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 94 9.3E-19 T 14-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 BD65_23 6da5c3203ba697fc9b4f21cd2ca3f363 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 36.797 T 14-10-2018 IPR022866 Heat shock protein HspQ BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 SUPERFAMILY SSF46557 4 79 4.97E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 Gene3D G3DSA:1.10.287.180 2 77 7.3E-29 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 1.9E-71 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 SUPERFAMILY SSF54534 81 156 2.35E-24 T 14-10-2018 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 PIRSF PIRSF006092 1 158 2.0E-59 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 53.164 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 1.0E-23 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 Gene3D G3DSA:3.10.50.30 79 158 3.5E-33 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 29.301 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BD65_2142 f2edb90aa813dea4265de63e0a308b9d 163 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 2.2E-29 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BD65_88 8469085d966e1577f40bff53a36ff36f 148 PRINTS PR00502 NUDIX hydrolase family signature 45 60 1.9E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BD65_88 8469085d966e1577f40bff53a36ff36f 148 PRINTS PR00502 NUDIX hydrolase family signature 31 45 1.9E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BD65_88 8469085d966e1577f40bff53a36ff36f 148 SUPERFAMILY SSF55811 2 134 5.42E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_88 8469085d966e1577f40bff53a36ff36f 148 Gene3D G3DSA:3.90.79.10 1 148 3.3E-44 T 14-10-2018 BD65_88 8469085d966e1577f40bff53a36ff36f 148 Pfam PF00293 NUDIX domain 4 116 6.4E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_88 8469085d966e1577f40bff53a36ff36f 148 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BD65_660 ec4d91690cffc7fd4475a4d6d61146fa 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 4.7E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_660 ec4d91690cffc7fd4475a4d6d61146fa 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 9.5E-32 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BD65_660 ec4d91690cffc7fd4475a4d6d61146fa 222 SUPERFAMILY SSF161098 13 206 1.64E-48 T 14-10-2018 IPR035906 MetI-like superfamily BD65_660 ec4d91690cffc7fd4475a4d6d61146fa 222 Gene3D G3DSA:1.10.3720.10 4 219 3.9E-60 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1580 4fe78f5b80021a8ba387252f1878c593 343 Gene3D G3DSA:3.20.20.70 19 260 1.8E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1580 4fe78f5b80021a8ba387252f1878c593 343 SUPERFAMILY SSF51395 21 333 1.5E-75 T 14-10-2018 BD65_1580 4fe78f5b80021a8ba387252f1878c593 343 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BD65_1580 4fe78f5b80021a8ba387252f1878c593 343 Gene3D G3DSA:1.20.120.1460 267 339 1.6E-22 T 14-10-2018 BD65_1580 4fe78f5b80021a8ba387252f1878c593 343 Pfam PF01207 Dihydrouridine synthase (Dus) 24 324 4.1E-96 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BD65_1580 4fe78f5b80021a8ba387252f1878c593 343 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 15 337 52.835 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 BD65_1580 4fe78f5b80021a8ba387252f1878c593 343 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 21 336 1.9E-164 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 BD65_1580 4fe78f5b80021a8ba387252f1878c593 343 PIRSF PIRSF006621 10 332 1.5E-72 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BD65_2845 c1b8118b6a18e70cf33d026551ee7db2 593 Gene3D G3DSA:1.20.1560.10 1 327 6.2E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_2845 c1b8118b6a18e70cf33d026551ee7db2 593 Gene3D G3DSA:3.40.50.300 334 588 3.8E-80 T 14-10-2018 BD65_2845 c1b8118b6a18e70cf33d026551ee7db2 593 Pfam PF00005 ABC transporter 357 505 1.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2845 c1b8118b6a18e70cf33d026551ee7db2 593 SMART SM00382 366 557 1.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2845 c1b8118b6a18e70cf33d026551ee7db2 593 SUPERFAMILY SSF52540 336 576 2.24E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2845 c1b8118b6a18e70cf33d026551ee7db2 593 Pfam PF00664 ABC transporter transmembrane region 25 295 2.5E-41 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BD65_2845 c1b8118b6a18e70cf33d026551ee7db2 593 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2845 c1b8118b6a18e70cf33d026551ee7db2 593 SUPERFAMILY SSF90123 12 324 7.72E-68 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 Pfam PF00271 Helicase conserved C-terminal domain 435 544 1.9E-16 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 SUPERFAMILY SSF52540 37 580 5.54E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 Pfam PF12344 Ultra-violet resistance protein B 552 593 9.7E-19 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 SUPERFAMILY SSF52540 3 415 2.48E-137 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 Gene3D G3DSA:3.40.50.300 415 589 1.3E-47 T 14-10-2018 BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 665 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 Gene3D G3DSA:4.10.860.10 611 672 2.6E-21 T 14-10-2018 BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 667 43.715 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 SMART SM00487 9 425 1.7E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 Pfam PF02151 UvrB/uvrC motif 632 667 1.3E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 Pfam PF04851 Type III restriction enzyme, res subunit 11 92 3.1E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 SUPERFAMILY SSF46600 623 668 7.06E-12 T 14-10-2018 IPR036876 UVR domain superfamily BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 Gene3D G3DSA:3.40.50.300 1 246 2.0E-76 T 14-10-2018 BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 SMART SM00490 460 546 9.4E-19 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_3075 84e00ee89cbaf7b1644af0f70d4fbf88 672 Gene3D G3DSA:3.40.50.300 267 414 1.1E-51 T 14-10-2018 BD65_768 bdf81ef59b4ec13530a6c4d41cdd02b2 281 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 2.2E-108 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BD65_768 bdf81ef59b4ec13530a6c4d41cdd02b2 281 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BD65_768 bdf81ef59b4ec13530a6c4d41cdd02b2 281 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BD65_768 bdf81ef59b4ec13530a6c4d41cdd02b2 281 SUPERFAMILY SSF51658 1 278 7.07E-101 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily BD65_768 bdf81ef59b4ec13530a6c4d41cdd02b2 281 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BD65_768 bdf81ef59b4ec13530a6c4d41cdd02b2 281 Gene3D G3DSA:3.20.20.150 1 280 1.1E-110 T 14-10-2018 BD65_768 bdf81ef59b4ec13530a6c4d41cdd02b2 281 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.351 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BD65_768 bdf81ef59b4ec13530a6c4d41cdd02b2 281 SMART SM00518 3 279 6.2E-129 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BD65_768 bdf81ef59b4ec13530a6c4d41cdd02b2 281 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 4.0E-42 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain BD65_1042 02f484fbb54d53dedda601914a441f21 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 3.5E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BD65_1042 02f484fbb54d53dedda601914a441f21 66 SUPERFAMILY SSF140319 3 64 2.35E-26 T 14-10-2018 IPR036762 IscX-like superfamily BD65_1042 02f484fbb54d53dedda601914a441f21 66 Gene3D G3DSA:1.10.10.600 1 66 1.5E-30 T 14-10-2018 IPR036762 IscX-like superfamily BD65_1042 02f484fbb54d53dedda601914a441f21 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 1.7E-31 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BD65_1042 02f484fbb54d53dedda601914a441f21 66 PIRSF PIRSF039003 3 66 6.7E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BD65_165 0515b96f7944ee193d1163ef9b4b0e29 215 Gene3D G3DSA:1.10.10.10 95 173 2.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_165 0515b96f7944ee193d1163ef9b4b0e29 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.5E-62 T 14-10-2018 IPR007432 Protein of unknown function DUF480 BD65_165 0515b96f7944ee193d1163ef9b4b0e29 215 SUPERFAMILY SSF46785 2 84 1.85E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_165 0515b96f7944ee193d1163ef9b4b0e29 215 SUPERFAMILY SSF46785 90 171 9.29E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_165 0515b96f7944ee193d1163ef9b4b0e29 215 Gene3D G3DSA:1.10.10.10 1 90 1.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_165 0515b96f7944ee193d1163ef9b4b0e29 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 33.531 T 14-10-2018 IPR007432 Protein of unknown function DUF480 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 SUPERFAMILY SSF54980 411 488 1.73E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 SUPERFAMILY SSF54980 612 697 2.27E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 1.1E-66 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Gene3D G3DSA:3.30.230.10 491 695 1.9E-89 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Gene3D G3DSA:3.40.50.300 1 303 4.7E-116 T 14-10-2018 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Gene3D G3DSA:3.30.70.240 613 683 1.9E-89 T 14-10-2018 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 SUPERFAMILY SSF54211 486 608 1.39E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Pfam PF00679 Elongation factor G C-terminus 609 694 2.0E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 113.672 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.7E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 9.7E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 SUPERFAMILY SSF50447 271 411 1.02E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Gene3D G3DSA:2.40.30.10 304 411 6.4E-44 T 14-10-2018 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Gene3D G3DSA:3.30.70.870 412 487 1.3E-32 T 14-10-2018 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 SUPERFAMILY SSF52540 6 287 2.77E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Pfam PF14492 Elongation Factor G, domain II 411 485 9.8E-34 T 14-10-2018 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 SMART SM00838 609 696 2.3E-58 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 Pfam PF03764 Elongation factor G, domain IV 486 607 7.6E-49 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 SMART SM00889 487 607 1.3E-75 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2203 9669e2b080aef7bf868106357e5a0d25 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 SUPERFAMILY SSF88697 276 366 1.1E-23 T 14-10-2018 IPR015947 PUA-like superfamily BD65_2772 2d61a2da8a9220c19075c5d612684757 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 6.9E-57 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 6.9E-57 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 6.9E-57 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 6.9E-57 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 6.9E-57 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 Gene3D G3DSA:2.30.130.10 266 367 2.4E-29 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 4.7E-152 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 Pfam PF01472 PUA domain 276 350 4.9E-21 T 14-10-2018 IPR002478 PUA domain GO:0003723 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 SMART SM00359 276 359 2.5E-21 T 14-10-2018 IPR002478 PUA domain GO:0003723 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 263 35.993 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 SUPERFAMILY SSF53633 6 256 5.37E-65 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_2772 2d61a2da8a9220c19075c5d612684757 367 Pfam PF00696 Amino acid kinase family 6 234 7.3E-44 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 PIRSF PIRSF000729 1 367 1.3E-141 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BD65_2772 2d61a2da8a9220c19075c5d612684757 367 Gene3D G3DSA:3.40.1160.10 2 258 6.2E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1809 5b266c5b4c854be217da00608f4d3112 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 2.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_1809 5b266c5b4c854be217da00608f4d3112 211 SUPERFAMILY SSF46689 3 77 2.32E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1809 5b266c5b4c854be217da00608f4d3112 211 Gene3D G3DSA:1.10.357.10 53 209 3.6E-42 T 14-10-2018 BD65_1809 5b266c5b4c854be217da00608f4d3112 211 Gene3D G3DSA:1.10.10.60 2 52 1.8E-22 T 14-10-2018 BD65_1809 5b266c5b4c854be217da00608f4d3112 211 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 1 209 52.645 T 14-10-2018 IPR023764 Transcriptional repressor HTH, FabR BD65_2865 5f3bbea2c8ff90f2a1137d4517bf9e43 224 SMART SM00862 144 217 4.8E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2865 5f3bbea2c8ff90f2a1137d4517bf9e43 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 2.7E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2865 5f3bbea2c8ff90f2a1137d4517bf9e43 224 SUPERFAMILY SSF46894 119 218 5.67E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2865 5f3bbea2c8ff90f2a1137d4517bf9e43 224 SMART SM00448 1 112 4.0E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2865 5f3bbea2c8ff90f2a1137d4517bf9e43 224 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2865 5f3bbea2c8ff90f2a1137d4517bf9e43 224 Gene3D G3DSA:1.10.10.10 122 223 1.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2865 5f3bbea2c8ff90f2a1137d4517bf9e43 224 SUPERFAMILY SSF52172 1 130 1.71E-39 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2865 5f3bbea2c8ff90f2a1137d4517bf9e43 224 Gene3D G3DSA:3.40.50.2300 1 121 1.8E-40 T 14-10-2018 BD65_1144 15cee340a9e1492b4ddebcb3de4a680c 333 Gene3D G3DSA:3.40.190.10 25 324 2.0E-137 T 14-10-2018 BD65_1144 15cee340a9e1492b4ddebcb3de4a680c 333 SUPERFAMILY SSF53850 24 324 1.68E-91 T 14-10-2018 BD65_1144 15cee340a9e1492b4ddebcb3de4a680c 333 Gene3D G3DSA:3.40.190.100 113 252 2.0E-137 T 14-10-2018 BD65_1144 15cee340a9e1492b4ddebcb3de4a680c 333 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 36 311 5.9E-53 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BD65_559 2be0059e4d4817ca92962b9fdf94e7a7 454 SUPERFAMILY SSF143548 16 158 1.67E-45 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BD65_559 2be0059e4d4817ca92962b9fdf94e7a7 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.9E-95 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit BD65_559 2be0059e4d4817ca92962b9fdf94e7a7 454 Gene3D G3DSA:3.30.1330.90 10 159 7.9E-52 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BD65_559 2be0059e4d4817ca92962b9fdf94e7a7 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.2E-224 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BD65_559 2be0059e4d4817ca92962b9fdf94e7a7 454 Pfam PF03315 Serine dehydratase beta chain 3 155 5.1E-56 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Pfam PF04545 Sigma-70, region 4 547 600 1.0E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Gene3D G3DSA:1.10.601.10 113 448 1.0E-146 T 14-10-2018 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 7.8E-121 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 SUPERFAMILY SSF88946 115 446 3.27E-101 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 3.5E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 2.2E-30 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.623 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Pfam PF04546 Sigma-70, non-essential region 139 348 2.4E-73 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Gene3D G3DSA:1.10.10.10 452 528 5.5E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Pfam PF04539 Sigma-70 region 3 458 533 3.5E-29 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Gene3D G3DSA:1.10.10.10 529 613 1.8E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 SUPERFAMILY SSF88659 509 611 2.32E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 SUPERFAMILY SSF88659 452 525 1.54E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BD65_1403 f67c1d307d6d9670b405a5bb58a90480 613 Gene3D G3DSA:1.10.220.120 1 64 5.3E-31 T 14-10-2018 BD65_1332 00d13d068f6cb3e515364ef5c0c4ee22 764 Pfam PF01228 Glycine radical 634 745 4.6E-41 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 BD65_1332 00d13d068f6cb3e515364ef5c0c4ee22 764 SUPERFAMILY SSF51998 10 763 2.06E-276 T 14-10-2018 BD65_1332 00d13d068f6cb3e515364ef5c0c4ee22 764 PIRSF PIRSF000379 12 764 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 BD65_1332 00d13d068f6cb3e515364ef5c0c4ee22 764 Pfam PF02901 Pyruvate formate lyase-like 27 618 2.1E-193 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 BD65_1332 00d13d068f6cb3e515364ef5c0c4ee22 764 Gene3D G3DSA:3.20.70.20 6 764 0.0 T 14-10-2018 BD65_1332 00d13d068f6cb3e515364ef5c0c4ee22 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 BD65_1332 00d13d068f6cb3e515364ef5c0c4ee22 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BD65_1835 d8ee7000bffda2af3205335adf4d164e 386 PIRSF PIRSF001434 1 384 1.0E-136 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_1835 d8ee7000bffda2af3205335adf4d164e 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_1835 d8ee7000bffda2af3205335adf4d164e 386 Gene3D G3DSA:3.40.640.10 1 247 8.1E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_1835 d8ee7000bffda2af3205335adf4d164e 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 2.2E-207 T 14-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 BD65_1835 d8ee7000bffda2af3205335adf4d164e 386 SUPERFAMILY SSF53383 5 381 3.4E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_1835 d8ee7000bffda2af3205335adf4d164e 386 Gene3D G3DSA:3.90.1150.10 248 385 1.1E-54 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1835 d8ee7000bffda2af3205335adf4d164e 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 1.1E-143 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_445 69d75bfd62a470323b31e358b875aa3d 383 Gene3D G3DSA:3.40.50.150 117 376 7.6E-100 T 14-10-2018 BD65_445 69d75bfd62a470323b31e358b875aa3d 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 1.2E-100 T 14-10-2018 BD65_445 69d75bfd62a470323b31e358b875aa3d 383 SUPERFAMILY SSF53335 117 370 2.03E-78 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_445 69d75bfd62a470323b31e358b875aa3d 383 PIRSF PIRSF003085 2 379 1.7E-125 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 ProSitePatterns PS00213 Lipocalin signature. 32 45 - T 14-10-2018 IPR022272 Lipocalin family conserved site BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 Gene3D G3DSA:2.40.128.20 7 175 3.8E-56 T 14-10-2018 IPR012674 Calycin BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 Pfam PF08212 Lipocalin-like domain 34 173 4.9E-43 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 PIRSF PIRSF036893 3 178 3.2E-48 T 14-10-2018 IPR022271 Lipocalin, ApoD type BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 PRINTS PR01171 Bacterial lipocalin signature 69 78 9.0E-42 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 PRINTS PR01171 Bacterial lipocalin signature 162 172 9.0E-42 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 PRINTS PR01171 Bacterial lipocalin signature 50 66 9.0E-42 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 PRINTS PR01171 Bacterial lipocalin signature 135 146 9.0E-42 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 PRINTS PR01171 Bacterial lipocalin signature 103 117 9.0E-42 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 PRINTS PR01171 Bacterial lipocalin signature 120 128 9.0E-42 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 PRINTS PR01171 Bacterial lipocalin signature 33 47 9.0E-42 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BD65_2275 1c5002fea0baf2a12a5ff17bd9761e6c 180 SUPERFAMILY SSF50814 10 175 9.35E-50 T 14-10-2018 IPR012674 Calycin BD65_16 b238bcf128bbf8a51cdd7bd4a36ba43a 209 Pfam PF04994 TfoX C-terminal domain 117 196 1.4E-23 T 14-10-2018 IPR007077 TfoX, C-terminal BD65_16 b238bcf128bbf8a51cdd7bd4a36ba43a 209 Pfam PF04993 TfoX N-terminal domain 16 105 4.2E-25 T 14-10-2018 IPR007076 TfoX, N-terminal BD65_16 b238bcf128bbf8a51cdd7bd4a36ba43a 209 Gene3D G3DSA:3.30.1460.30 5 107 4.4E-26 T 14-10-2018 BD65_16 b238bcf128bbf8a51cdd7bd4a36ba43a 209 SUPERFAMILY SSF159894 16 106 6.28E-28 T 14-10-2018 BD65_16 b238bcf128bbf8a51cdd7bd4a36ba43a 209 Gene3D G3DSA:1.10.150.20 116 204 5.0E-20 T 14-10-2018 BD65_16 b238bcf128bbf8a51cdd7bd4a36ba43a 209 PIRSF PIRSF028788 1 203 4.7E-60 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type BD65_2179 2cdfe96ed3fddde027f99fa2ad37a127 135 SUPERFAMILY SSF82784 1 131 4.06E-42 T 14-10-2018 IPR036102 OsmC/Ohr superfamily BD65_2179 2cdfe96ed3fddde027f99fa2ad37a127 135 Pfam PF02566 OsmC-like protein 30 127 1.7E-18 T 14-10-2018 IPR003718 OsmC/Ohr family BD65_2179 2cdfe96ed3fddde027f99fa2ad37a127 135 Gene3D G3DSA:2.20.25.10 1 34 1.6E-21 T 14-10-2018 BD65_2179 2cdfe96ed3fddde027f99fa2ad37a127 135 Gene3D G3DSA:3.30.300.20 35 133 3.9E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BD65_1438 2517a5a078afc0595aef99cc9c93fea1 88 SUPERFAMILY SSF46689 1 73 8.6E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1438 2517a5a078afc0595aef99cc9c93fea1 88 Pfam PF01527 Transposase 2 71 2.9E-20 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_1118 2517a5a078afc0595aef99cc9c93fea1 88 SUPERFAMILY SSF46689 1 73 8.6E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1118 2517a5a078afc0595aef99cc9c93fea1 88 Pfam PF01527 Transposase 2 71 2.9E-20 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_2927 2517a5a078afc0595aef99cc9c93fea1 88 SUPERFAMILY SSF46689 1 73 8.6E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2927 2517a5a078afc0595aef99cc9c93fea1 88 Pfam PF01527 Transposase 2 71 2.9E-20 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_2427 2517a5a078afc0595aef99cc9c93fea1 88 SUPERFAMILY SSF46689 1 73 8.6E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2427 2517a5a078afc0595aef99cc9c93fea1 88 Pfam PF01527 Transposase 2 71 2.9E-20 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_1735 3d9dd2d837f43a5bf70e63601aea8eb0 451 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 BD65_1735 3d9dd2d837f43a5bf70e63601aea8eb0 451 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 1.3E-260 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 BD65_1735 3d9dd2d837f43a5bf70e63601aea8eb0 451 Gene3D G3DSA:1.20.1250.20 18 226 1.9E-58 T 14-10-2018 BD65_1735 3d9dd2d837f43a5bf70e63601aea8eb0 451 PIRSF PIRSF002808 5 451 1.8E-171 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 BD65_1735 3d9dd2d837f43a5bf70e63601aea8eb0 451 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 1.1E-164 T 14-10-2018 BD65_1735 3d9dd2d837f43a5bf70e63601aea8eb0 451 Pfam PF07690 Major Facilitator Superfamily 34 400 3.7E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_1735 3d9dd2d837f43a5bf70e63601aea8eb0 451 SUPERFAMILY SSF103473 15 441 1.02E-83 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_1735 3d9dd2d837f43a5bf70e63601aea8eb0 451 Gene3D G3DSA:1.20.1250.20 240 450 9.1E-63 T 14-10-2018 BD65_1673 3dd17a9af5142e31d3efe9a30291fb32 483 Pfam PF02386 Cation transport protein 37 477 5.0E-92 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 BD65_1673 3dd17a9af5142e31d3efe9a30291fb32 483 PIRSF PIRSF006247 1 483 2.2E-183 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 BD65_1673 3dd17a9af5142e31d3efe9a30291fb32 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 3.2E-127 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 BD65_2208 8c2f7ed2aa2ebd30188aaef9d81bfe00 209 Gene3D G3DSA:2.40.30.10 128 209 4.6E-18 T 14-10-2018 BD65_2208 8c2f7ed2aa2ebd30188aaef9d81bfe00 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 2.5E-92 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2208 8c2f7ed2aa2ebd30188aaef9d81bfe00 209 Pfam PF00297 Ribosomal protein L3 42 182 1.3E-12 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2208 8c2f7ed2aa2ebd30188aaef9d81bfe00 209 Gene3D G3DSA:2.40.50.620 32 94 3.3E-15 T 14-10-2018 BD65_2208 8c2f7ed2aa2ebd30188aaef9d81bfe00 209 SUPERFAMILY SSF50447 1 208 1.06E-79 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_2208 8c2f7ed2aa2ebd30188aaef9d81bfe00 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site BD65_2208 8c2f7ed2aa2ebd30188aaef9d81bfe00 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.012 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1554 55a9ede67201fb8e33ab65d5117f1059 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.7E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BD65_1554 55a9ede67201fb8e33ab65d5117f1059 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.7E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BD65_1554 55a9ede67201fb8e33ab65d5117f1059 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.7E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BD65_1554 55a9ede67201fb8e33ab65d5117f1059 154 SUPERFAMILY SSF51230 79 154 2.49E-26 T 14-10-2018 IPR011053 Single hybrid motif BD65_1554 55a9ede67201fb8e33ab65d5117f1059 154 Pfam PF00364 Biotin-requiring enzyme 81 153 2.1E-25 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BD65_1554 55a9ede67201fb8e33ab65d5117f1059 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 1.2E-64 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BD65_1554 55a9ede67201fb8e33ab65d5117f1059 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BD65_1554 55a9ede67201fb8e33ab65d5117f1059 154 Gene3D G3DSA:2.40.50.100 75 154 4.7E-32 T 14-10-2018 BD65_3222 ca6402f7aabddb9af5ef68b52ca994ef 106 Gene3D G3DSA:3.30.1390.10 1 106 4.4E-47 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BD65_3222 ca6402f7aabddb9af5ef68b52ca994ef 106 SUPERFAMILY SSF54736 22 105 4.18E-33 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BD65_3222 ca6402f7aabddb9af5ef68b52ca994ef 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 21 101 28.33 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS BD65_3222 ca6402f7aabddb9af5ef68b52ca994ef 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.4E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 SUPERFAMILY SSF52954 529 636 1.25E-32 T 14-10-2018 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 6.9E-242 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 SMART SM00863 170 219 2.6E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 Gene3D G3DSA:3.30.54.20 130 187 4.2E-62 T 14-10-2018 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 Gene3D G3DSA:3.30.980.10 69 222 4.2E-62 T 14-10-2018 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 Pfam PF03129 Anticodon binding domain 541 629 7.4E-22 T 14-10-2018 IPR004154 Anticodon-binding BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 2.8E-50 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 Gene3D G3DSA:3.30.930.10 223 531 2.3E-128 T 14-10-2018 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 Gene3D G3DSA:3.10.20.30 3 62 3.5E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 Pfam PF02824 TGS domain 4 61 7.2E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 SUPERFAMILY SSF81271 3 61 8.5E-16 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.8E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 SUPERFAMILY SSF55186 63 239 1.31E-63 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.025 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 SUPERFAMILY SSF55681 243 525 7.76E-97 T 14-10-2018 BD65_496 4045bf71a904f0cfbca5bac26a7d6e3d 642 Gene3D G3DSA:3.40.50.800 532 642 2.5E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily BD65_1770 8f7ef8613a8a3b4e7685400b3becb1ea 421 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 39.809 T 14-10-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 BD65_1770 8f7ef8613a8a3b4e7685400b3becb1ea 421 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 5.4E-13 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BD65_1509 132d836a32e67cdedd393b298eee26bc 325 Gene3D G3DSA:1.20.58.1130 8 207 1.1E-86 T 14-10-2018 BD65_1509 132d836a32e67cdedd393b298eee26bc 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 6.9E-91 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 BD65_1509 132d836a32e67cdedd393b298eee26bc 325 Pfam PF01699 Sodium/calcium exchanger protein 177 317 2.0E-29 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BD65_1509 132d836a32e67cdedd393b298eee26bc 325 Pfam PF01699 Sodium/calcium exchanger protein 4 143 7.4E-29 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BD65_1509 132d836a32e67cdedd393b298eee26bc 325 Gene3D G3DSA:1.20.1420.30 35 309 1.1E-86 T 14-10-2018 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 SUPERFAMILY SSF140990 402 601 3.92E-72 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 3.0E-246 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 SMART SM00382 184 323 1.9E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 Gene3D G3DSA:1.10.8.60 322 396 5.3E-28 T 14-10-2018 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 Gene3D G3DSA:2.40.50.920 24 101 1.2E-36 T 14-10-2018 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 Gene3D G3DSA:3.40.50.300 141 320 1.1E-70 T 14-10-2018 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 Gene3D G3DSA:1.20.58.760 397 600 3.5E-69 T 14-10-2018 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 607 37.262 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 Pfam PF06480 FtsH Extracellular 5 93 1.4E-15 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 Pfam PF01434 Peptidase family M41 382 591 2.2E-81 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 SUPERFAMILY SSF52540 142 391 2.96E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2347 42d033c44a01f2f070a67bd9e2e094a8 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 6.4E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_1906 b00b1ad53082bd09754b34281c94e1fb 82 Gene3D G3DSA:3.40.30.10 1 82 2.0E-27 T 14-10-2018 BD65_1906 b00b1ad53082bd09754b34281c94e1fb 82 Pfam PF00462 Glutaredoxin 4 63 1.1E-23 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BD65_1906 b00b1ad53082bd09754b34281c94e1fb 82 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 4.8E-35 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 BD65_1906 b00b1ad53082bd09754b34281c94e1fb 82 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 BD65_1906 b00b1ad53082bd09754b34281c94e1fb 82 SUPERFAMILY SSF52833 1 82 1.55E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1906 b00b1ad53082bd09754b34281c94e1fb 82 PRINTS PR00160 Glutaredoxin signature 4 22 1.2E-17 T 14-10-2018 IPR014025 Glutaredoxin subgroup BD65_1906 b00b1ad53082bd09754b34281c94e1fb 82 PRINTS PR00160 Glutaredoxin signature 60 73 1.2E-17 T 14-10-2018 IPR014025 Glutaredoxin subgroup BD65_1906 b00b1ad53082bd09754b34281c94e1fb 82 PRINTS PR00160 Glutaredoxin signature 46 59 1.2E-17 T 14-10-2018 IPR014025 Glutaredoxin subgroup BD65_726 7d353d0edb2f87d307dd574dc56e98cb 336 Pfam PF00107 Zinc-binding dehydrogenase 161 285 5.2E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BD65_726 7d353d0edb2f87d307dd574dc56e98cb 336 SMART SM00829 20 334 8.9E-56 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BD65_726 7d353d0edb2f87d307dd574dc56e98cb 336 Gene3D G3DSA:3.40.50.720 130 273 2.2E-102 T 14-10-2018 BD65_726 7d353d0edb2f87d307dd574dc56e98cb 336 Gene3D G3DSA:3.90.180.10 24 334 2.2E-102 T 14-10-2018 BD65_726 7d353d0edb2f87d307dd574dc56e98cb 336 SUPERFAMILY SSF51735 121 298 3.22E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_726 7d353d0edb2f87d307dd574dc56e98cb 336 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 336 3.1E-145 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 BD65_726 7d353d0edb2f87d307dd574dc56e98cb 336 SUPERFAMILY SSF50129 11 147 9.89E-38 T 14-10-2018 IPR011032 GroES-like superfamily BD65_726 7d353d0edb2f87d307dd574dc56e98cb 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 112 7.2E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BD65_3016 9b6510ee12d1f16612e426ae2a50bd91 317 Pfam PF08349 Protein of unknown function (DUF1722) 191 308 3.4E-43 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 BD65_3016 9b6510ee12d1f16612e426ae2a50bd91 317 Pfam PF04463 Protein of unknown function (DUF523) 7 148 8.4E-37 T 14-10-2018 IPR007553 Domain of unknown function DUF523 BD65_3016 9b6510ee12d1f16612e426ae2a50bd91 317 PIRSF PIRSF037004 1 317 2.3E-130 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 Gene3D G3DSA:2.40.160.20 22 200 3.3E-70 T 14-10-2018 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 SUPERFAMILY SSF103088 218 343 6.8E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 Pfam PF00691 OmpA family 231 324 2.3E-20 T 14-10-2018 IPR006665 OmpA-like domain BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 Pfam PF01389 OmpA-like transmembrane domain 23 202 1.6E-71 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 PRINTS PR01021 OMPA domain signature 264 279 3.9E-19 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 PRINTS PR01021 OMPA domain signature 232 254 3.9E-19 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 PRINTS PR01021 OMPA domain signature 279 295 3.9E-19 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 PRINTS PR01022 Outer membrane protein A signature 288 307 6.6E-65 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 PRINTS PR01022 Outer membrane protein A signature 249 268 6.6E-65 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 PRINTS PR01022 Outer membrane protein A signature 220 235 6.6E-65 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 PRINTS PR01022 Outer membrane protein A signature 322 335 6.6E-65 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 PRINTS PR01022 Outer membrane protein A signature 173 187 6.6E-65 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 PRINTS PR01022 Outer membrane protein A signature 187 201 6.6E-65 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 PRINTS PR01022 Outer membrane protein A signature 110 126 6.6E-65 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 SUPERFAMILY SSF56925 22 202 3.66E-41 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 ProSitePatterns PS01068 OmpA-like domain. 266 310 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 BD65_14 a2fdf9d5e5b4e3cbd449285b940f6409 355 Gene3D G3DSA:3.30.1330.60 208 352 3.9E-54 T 14-10-2018 IPR036737 OmpA-like domain superfamily BD65_3135 3f3e6dd1d11fa342d91bd293feaf7621 284 Gene3D G3DSA:3.40.50.1820 5 280 1.6E-89 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_3135 3f3e6dd1d11fa342d91bd293feaf7621 284 Pfam PF00756 Putative esterase 26 261 1.8E-67 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BD65_3135 3f3e6dd1d11fa342d91bd293feaf7621 284 SUPERFAMILY SSF53474 5 279 4.67E-87 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_3135 3f3e6dd1d11fa342d91bd293feaf7621 284 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 2.0E-117 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 BD65_1810 22547313d8f849a4ad74688e431300e6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1810 22547313d8f849a4ad74688e431300e6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1810 22547313d8f849a4ad74688e431300e6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1810 22547313d8f849a4ad74688e431300e6 305 SUPERFAMILY SSF53850 89 295 4.81E-46 T 14-10-2018 BD65_1810 22547313d8f849a4ad74688e431300e6 305 SUPERFAMILY SSF46785 1 110 1.18E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1810 22547313d8f849a4ad74688e431300e6 305 Gene3D G3DSA:3.40.190.10 91 281 5.1E-76 T 14-10-2018 BD65_1810 22547313d8f849a4ad74688e431300e6 305 Gene3D G3DSA:3.40.190.10 164 267 5.1E-76 T 14-10-2018 BD65_1810 22547313d8f849a4ad74688e431300e6 305 Gene3D G3DSA:1.10.10.10 1 84 3.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1810 22547313d8f849a4ad74688e431300e6 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1810 22547313d8f849a4ad74688e431300e6 305 Pfam PF03466 LysR substrate binding domain 88 293 5.3E-52 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_2252 8e66682d0ac64483256d51646cd95556 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site BD65_2252 8e66682d0ac64483256d51646cd95556 551 Pfam PF00474 Sodium:solute symporter family 64 470 2.6E-129 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BD65_2252 8e66682d0ac64483256d51646cd95556 551 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 2 551 51.031 T 14-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 BD65_2252 8e66682d0ac64483256d51646cd95556 551 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 452 472 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site BD65_2252 8e66682d0ac64483256d51646cd95556 551 Gene3D G3DSA:1.20.1730.10 51 546 4.4E-62 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily BD65_2252 8e66682d0ac64483256d51646cd95556 551 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 4 551 0.0 T 14-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 BD65_2252 8e66682d0ac64483256d51646cd95556 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 469 1.2E-62 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BD65_1648 0dad05bd4cd544a9fd23fd3f3a37555a 282 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 47 151 9.7E-6 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain BD65_1648 0dad05bd4cd544a9fd23fd3f3a37555a 282 SUPERFAMILY SSF51695 1 282 1.99E-39 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_1648 0dad05bd4cd544a9fd23fd3f3a37555a 282 Gene3D G3DSA:3.20.20.190 1 282 3.0E-62 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_1648 0dad05bd4cd544a9fd23fd3f3a37555a 282 SMART SM00148 16 151 3.0E-5 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 Gene3D G3DSA:1.20.200.10 143 410 6.6E-114 T 14-10-2018 BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 Pfam PF00206 Lyase 13 345 1.6E-107 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 6.1E-27 T 14-10-2018 IPR000362 Fumarate lyase family BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 6.1E-27 T 14-10-2018 IPR000362 Fumarate lyase family BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 6.1E-27 T 14-10-2018 IPR000362 Fumarate lyase family BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 6.1E-27 T 14-10-2018 IPR000362 Fumarate lyase family BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 Gene3D G3DSA:1.10.40.30 411 460 2.4E-29 T 14-10-2018 BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 8.7E-264 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 4.8E-5 T 14-10-2018 BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 4.8E-5 T 14-10-2018 BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 4.8E-5 T 14-10-2018 BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 SUPERFAMILY SSF48557 2 458 4.12E-142 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 Gene3D G3DSA:1.10.275.10 6 142 1.8E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal BD65_2261 70936fef111407a6d7386d2563ddb3a9 478 Pfam PF10415 Fumarase C C-terminus 411 464 4.1E-17 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 Pfam PF08482 ATP-dependent helicase C-terminal 667 799 2.3E-53 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 Gene3D G3DSA:1.20.120.1080 372 481 9.0E-11 T 14-10-2018 BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 Gene3D G3DSA:3.40.50.300 1 179 3.6E-53 T 14-10-2018 BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 SMART SM00490 226 328 1.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 PIRSF PIRSF005496 1 813 0.0 T 14-10-2018 BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 Pfam PF00270 DEAD/DEAH box helicase 19 162 1.3E-9 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 SMART SM00487 2 186 4.4E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 SMART SM00847 388 479 3.9E-15 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 811 0.0 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 SUPERFAMILY SSF52540 17 339 9.68E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 Gene3D G3DSA:3.40.50.300 180 346 9.8E-50 T 14-10-2018 BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 Pfam PF00271 Helicase conserved C-terminal domain 205 327 1.8E-14 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_2605 e3f758bc86ce0e109c16b6a958286b09 813 Pfam PF04408 Helicase associated domain (HA2) 389 475 2.3E-13 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 6.6E-16 T 14-10-2018 IPR000014 PAS domain BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 SUPERFAMILY SSF47226 662 774 1.96E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Gene3D G3DSA:3.40.50.2300 509 650 3.5E-33 T 14-10-2018 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 SUPERFAMILY SSF52172 526 660 6.55E-30 T 14-10-2018 IPR011006 CheY-like superfamily BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 SMART SM00091 155 221 2.8E-7 T 14-10-2018 IPR000014 PAS domain BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 SMART SM00387 394 507 9.2E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 SMART SM00388 282 347 3.5E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Pfam PF01627 Hpt domain 687 770 2.6E-14 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 4.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 SMART SM00073 676 773 5.5E-16 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 SUPERFAMILY SSF47384 269 347 6.67E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 3.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Pfam PF00989 PAS fold 157 266 4.6E-17 T 14-10-2018 IPR013767 PAS fold GO:0006355 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Gene3D G3DSA:1.10.287.970 1 89 1.7E-38 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 PIRSF PIRSF003182 1 779 0.0 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Pfam PF00072 Response regulator receiver domain 528 639 6.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Gene3D G3DSA:3.30.450.20 152 267 1.9E-19 T 14-10-2018 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 SUPERFAMILY SSF55785 143 267 1.31E-21 T 14-10-2018 IPR035965 PAS domain superfamily BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Gene3D G3DSA:1.20.120.160 656 779 7.9E-32 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 SUPERFAMILY SSF55874 336 505 7.33E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Gene3D G3DSA:1.10.287.130 268 345 2.0E-21 T 14-10-2018 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 SMART SM00448 526 639 3.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 Gene3D G3DSA:3.30.565.10 348 508 1.4E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 3.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 3.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 3.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1487 4d8395baca0771c11e0b1f332fee06a2 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 3.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1850 e8f4aacddf7c886475369256b5662c93 248 SUPERFAMILY SSF63380 3 99 1.58E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BD65_1850 e8f4aacddf7c886475369256b5662c93 248 SUPERFAMILY SSF52343 103 248 1.2E-38 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_1850 e8f4aacddf7c886475369256b5662c93 248 Gene3D G3DSA:2.40.30.10 1 96 1.3E-29 T 14-10-2018 BD65_1850 e8f4aacddf7c886475369256b5662c93 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 90 7.4E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BD65_1850 e8f4aacddf7c886475369256b5662c93 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 223 8.1E-19 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BD65_1850 e8f4aacddf7c886475369256b5662c93 248 Gene3D G3DSA:3.40.50.80 97 248 1.1E-40 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_1984 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 2.1E-8 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1984 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 2.1E-8 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1984 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 2.1E-8 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1984 fb7786ab362cf67342a12597eb194d21 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1984 fb7786ab362cf67342a12597eb194d21 79 Pfam PF00137 ATP synthase subunit C 11 69 9.9E-10 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 BD65_1984 fb7786ab362cf67342a12597eb194d21 79 SUPERFAMILY SSF81333 3 77 2.75E-18 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily BD65_1984 fb7786ab362cf67342a12597eb194d21 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BD65_1984 fb7786ab362cf67342a12597eb194d21 79 Gene3D G3DSA:1.20.20.10 1 79 2.4E-34 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1984 fb7786ab362cf67342a12597eb194d21 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.452 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_82 07c007499ff50e72691a505a0b58862d 484 SMART SM00387 373 479 1.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_82 07c007499ff50e72691a505a0b58862d 484 SMART SM00388 264 328 0.0057 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_82 07c007499ff50e72691a505a0b58862d 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 7.9E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_82 07c007499ff50e72691a505a0b58862d 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 7.9E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_82 07c007499ff50e72691a505a0b58862d 484 Gene3D G3DSA:3.30.565.10 334 483 6.1E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_82 07c007499ff50e72691a505a0b58862d 484 Pfam PF08918 PhoQ Sensor 8 185 8.8E-89 T 14-10-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 BD65_82 07c007499ff50e72691a505a0b58862d 484 Gene3D G3DSA:1.10.287.130 216 330 1.0E-7 T 14-10-2018 BD65_82 07c007499ff50e72691a505a0b58862d 484 SUPERFAMILY SSF47384 247 322 3.14E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_82 07c007499ff50e72691a505a0b58862d 484 Gene3D G3DSA:3.30.450.140 42 193 5.9E-64 T 14-10-2018 IPR038429 PhoQ Sensor superfamily BD65_82 07c007499ff50e72691a505a0b58862d 484 SUPERFAMILY SSF55874 321 475 2.23E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_82 07c007499ff50e72691a505a0b58862d 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 474 1.3E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1694 452f716fd994488caf1cf34bc287481d 253 Gene3D G3DSA:3.40.50.1580 1 253 5.2E-81 T 14-10-2018 BD65_1694 452f716fd994488caf1cf34bc287481d 253 Pfam PF01048 Phosphorylase superfamily 21 244 1.7E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BD65_1694 452f716fd994488caf1cf34bc287481d 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_1694 452f716fd994488caf1cf34bc287481d 253 SUPERFAMILY SSF53167 6 250 1.83E-74 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BD65_1694 452f716fd994488caf1cf34bc287481d 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 1.7E-127 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 BD65_2677 d3eaca1832317a4e9d5e9c869f933f45 386 SUPERFAMILY SSF160544 232 338 7.32E-27 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BD65_2677 d3eaca1832317a4e9d5e9c869f933f45 386 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 2 337 2.1E-116 T 14-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 BD65_2677 d3eaca1832317a4e9d5e9c869f933f45 386 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 334 6.5E-88 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_2677 d3eaca1832317a4e9d5e9c869f933f45 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 196 214 1.4E-33 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_2677 d3eaca1832317a4e9d5e9c869f933f45 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 216 233 1.4E-33 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_2677 d3eaca1832317a4e9d5e9c869f933f45 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 290 311 1.4E-33 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_2677 d3eaca1832317a4e9d5e9c869f933f45 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 5 27 1.4E-33 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_2677 d3eaca1832317a4e9d5e9c869f933f45 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 260 275 1.4E-33 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_2677 d3eaca1832317a4e9d5e9c869f933f45 386 Gene3D G3DSA:3.40.1690.10 205 345 6.5E-46 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BD65_1482 2d08744dc061c09a87cdd130a9563ed2 117 Gene3D G3DSA:3.40.1350.10 9 117 4.0E-30 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BD65_1482 2d08744dc061c09a87cdd130a9563ed2 117 SUPERFAMILY SSF52980 4 112 2.9E-21 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BD65_1482 2d08744dc061c09a87cdd130a9563ed2 117 Pfam PF02021 Uncharacterised protein family UPF0102 10 102 5.8E-23 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 BD65_1482 2d08744dc061c09a87cdd130a9563ed2 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 116 8.6E-40 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 BD65_1482 2d08744dc061c09a87cdd130a9563ed2 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 115 22.813 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 BD65_1653 83536a1aa901a44ea4c5875b07c23ceb 167 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.914 T 14-10-2018 IPR022973 Ribosomal protein L10 BD65_1653 83536a1aa901a44ea4c5875b07c23ceb 167 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 157 2.0E-4 T 14-10-2018 BD65_1653 83536a1aa901a44ea4c5875b07c23ceb 167 Pfam PF00466 Ribosomal protein L10 6 101 9.6E-27 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 BD65_1653 83536a1aa901a44ea4c5875b07c23ceb 167 SUPERFAMILY SSF160369 4 162 5.89E-49 T 14-10-2018 BD65_1653 83536a1aa901a44ea4c5875b07c23ceb 167 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1653 83536a1aa901a44ea4c5875b07c23ceb 167 Gene3D G3DSA:3.30.70.1730 1 126 7.9E-36 T 14-10-2018 BD65_2698 db703eb3e4136a5f957c2109873550e5 498 Gene3D G3DSA:3.30.450.90 87 219 4.4E-52 T 14-10-2018 BD65_2698 db703eb3e4136a5f957c2109873550e5 498 SMART SM00382 247 373 2.3E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2698 db703eb3e4136a5f957c2109873550e5 498 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 9 493 5.4E-208 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 BD65_2698 db703eb3e4136a5f957c2109873550e5 498 Gene3D G3DSA:3.30.300.160 2 86 6.5E-12 T 14-10-2018 BD65_2698 db703eb3e4136a5f957c2109873550e5 498 SUPERFAMILY SSF160246 9 73 3.4E-11 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BD65_2698 db703eb3e4136a5f957c2109873550e5 498 SUPERFAMILY SSF52540 105 493 8.72E-104 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2698 db703eb3e4136a5f957c2109873550e5 498 Pfam PF00437 Type II/IV secretion system protein 121 386 5.1E-90 T 14-10-2018 IPR001482 Type II/IV secretion system protein BD65_2698 db703eb3e4136a5f957c2109873550e5 498 Gene3D G3DSA:3.40.50.300 220 497 1.2E-115 T 14-10-2018 BD65_2698 db703eb3e4136a5f957c2109873550e5 498 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 314 328 - T 14-10-2018 IPR001482 Type II/IV secretion system protein BD65_741 8e190cfd695223ed98516afdcabd7ddd 97 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 2.3E-31 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 BD65_741 8e190cfd695223ed98516afdcabd7ddd 97 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 74 2.0E-21 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 BD65_741 8e190cfd695223ed98516afdcabd7ddd 97 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 26.515 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 BD65_741 8e190cfd695223ed98516afdcabd7ddd 97 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 3.8E-29 T 14-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein BD65_741 8e190cfd695223ed98516afdcabd7ddd 97 PIRSF PIRSF002736 1 97 5.2E-38 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 Gene3D G3DSA:3.40.5.40 432 480 2.5E-36 T 14-10-2018 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 Gene3D G3DSA:1.10.490.80 591 689 5.0E-28 T 14-10-2018 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 14-10-2018 IPR025505 FHIPEP conserved site BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 Pfam PF00771 FHIPEP family 26 681 1.1E-214 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 Gene3D G3DSA:3.40.30.60 360 499 2.5E-36 T 14-10-2018 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 Gene3D G3DSA:1.10.8.540 501 589 2.2E-32 T 14-10-2018 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 PIRSF PIRSF005419 2 689 6.2E-207 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 1.1E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 1.1E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 1.1E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 1.1E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 1.1E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 1.1E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BD65_2668 1778b4d22b2910a55f6eb4cf891f4336 689 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 689 2.5E-248 T 14-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 Gene3D G3DSA:3.30.930.10 1 214 1.7E-110 T 14-10-2018 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 SUPERFAMILY SSF55681 8 292 3.62E-134 T 14-10-2018 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 5.3E-150 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 Gene3D G3DSA:1.20.58.180 215 297 4.9E-34 T 14-10-2018 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.584 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2034 084559b52f8b9d69c4a05734616c8ec5 304 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 6.8E-176 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 Gene3D G3DSA:1.10.10.10 169 244 5.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 Pfam PF04545 Sigma-70, region 4 264 317 2.7E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 Gene3D G3DSA:1.10.601.10 86 168 5.5E-46 T 14-10-2018 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 289 315 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 SUPERFAMILY SSF88659 169 243 8.72E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 Gene3D G3DSA:1.10.10.10 246 322 1.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 SUPERFAMILY SSF88946 58 166 1.96E-45 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 50 330 3.6E-144 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 Pfam PF04539 Sigma-70 region 3 176 250 2.5E-20 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 93 319 4.2E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 PRINTS PR00046 Major sigma-70 factor signature 268 280 2.5E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 PRINTS PR00046 Major sigma-70 factor signature 304 315 2.5E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 PRINTS PR00046 Major sigma-70 factor signature 289 304 2.5E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 PRINTS PR00046 Major sigma-70 factor signature 120 133 2.5E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 PRINTS PR00046 Major sigma-70 factor signature 144 152 2.5E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 Pfam PF04542 Sigma-70 region 2 96 165 3.2E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 120 133 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 SUPERFAMILY SSF88659 227 324 1.68E-23 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 Pfam PF00140 Sigma-70 factor, region 1.2 58 89 5.1E-11 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_2641 9114f0c3c6b1da915f3f0b44eabde0a6 332 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 12 330 39.986 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_197 54da7990fb9da3e655c6caa8b12a4a3b 634 SMART SM00491 474 603 2.4E-54 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BD65_197 54da7990fb9da3e655c6caa8b12a4a3b 634 Gene3D G3DSA:3.40.50.300 441 631 3.3E-36 T 14-10-2018 BD65_197 54da7990fb9da3e655c6caa8b12a4a3b 634 Gene3D G3DSA:3.40.50.300 18 283 1.8E-45 T 14-10-2018 BD65_197 54da7990fb9da3e655c6caa8b12a4a3b 634 SUPERFAMILY SSF52540 13 232 6.45E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_197 54da7990fb9da3e655c6caa8b12a4a3b 634 Pfam PF06733 DEAD_2 179 247 5.0E-5 T 14-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 BD65_197 54da7990fb9da3e655c6caa8b12a4a3b 634 Pfam PF13307 Helicase C-terminal domain 459 616 1.1E-33 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BD65_197 54da7990fb9da3e655c6caa8b12a4a3b 634 SUPERFAMILY SSF52540 40 596 2.35E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2934 969badb3216e35354fdf011c6d6d21e0 229 Pfam PF01988 VIT family 14 221 1.9E-52 T 14-10-2018 IPR008217 Ccc1 family BD65_1031 58d6d1cba7ac6502f10c9ca98b520a3c 424 Pfam PF03129 Anticodon binding domain 340 419 1.5E-10 T 14-10-2018 IPR004154 Anticodon-binding BD65_1031 58d6d1cba7ac6502f10c9ca98b520a3c 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.417 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BD65_1031 58d6d1cba7ac6502f10c9ca98b520a3c 424 Gene3D G3DSA:3.30.930.10 2 322 9.8E-118 T 14-10-2018 BD65_1031 58d6d1cba7ac6502f10c9ca98b520a3c 424 Gene3D G3DSA:3.40.50.800 326 423 2.3E-25 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily BD65_1031 58d6d1cba7ac6502f10c9ca98b520a3c 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.2E-46 T 14-10-2018 BD65_1031 58d6d1cba7ac6502f10c9ca98b520a3c 424 SUPERFAMILY SSF55681 5 318 4.21E-104 T 14-10-2018 BD65_1031 58d6d1cba7ac6502f10c9ca98b520a3c 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 3.3E-156 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BD65_1031 58d6d1cba7ac6502f10c9ca98b520a3c 424 PIRSF PIRSF001549 2 423 3.8E-128 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 BD65_1031 58d6d1cba7ac6502f10c9ca98b520a3c 424 SUPERFAMILY SSF52954 329 423 5.07E-24 T 14-10-2018 BD65_674 2f6084eef7a9b9b86b69371904fe019e 281 Pfam PF01223 DNA/RNA non-specific endonuclease 49 257 3.1E-41 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 BD65_674 2f6084eef7a9b9b86b69371904fe019e 281 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 119 127 - T 14-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 BD65_674 2f6084eef7a9b9b86b69371904fe019e 281 SMART SM00892 57 258 3.5E-39 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 BD65_674 2f6084eef7a9b9b86b69371904fe019e 281 SMART SM00477 58 258 1.8E-55 T 14-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 BD65_674 2f6084eef7a9b9b86b69371904fe019e 281 Gene3D G3DSA:3.40.570.10 35 278 3.6E-79 T 14-10-2018 BD65_674 2f6084eef7a9b9b86b69371904fe019e 281 SUPERFAMILY SSF54060 40 270 1.06E-51 T 14-10-2018 BD65_635 fbe49b26071c4edea6c496446bacef64 528 SUPERFAMILY SSF161098 286 519 1.21E-34 T 14-10-2018 IPR035906 MetI-like superfamily BD65_635 fbe49b26071c4edea6c496446bacef64 528 Gene3D G3DSA:1.10.3720.10 27 265 1.3E-37 T 14-10-2018 IPR035906 MetI-like superfamily BD65_635 fbe49b26071c4edea6c496446bacef64 528 Gene3D G3DSA:1.10.3720.10 278 525 9.2E-29 T 14-10-2018 IPR035906 MetI-like superfamily BD65_635 fbe49b26071c4edea6c496446bacef64 528 SUPERFAMILY SSF161098 24 254 7.52E-35 T 14-10-2018 IPR035906 MetI-like superfamily BD65_635 fbe49b26071c4edea6c496446bacef64 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 253 3.5E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_635 fbe49b26071c4edea6c496446bacef64 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 346 524 2.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1285 2c8ace7aed0cbb1b98415e3736b94974 219 SUPERFAMILY SSF100950 1 146 6.51E-48 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BD65_1285 2c8ace7aed0cbb1b98415e3736b94974 219 Gene3D G3DSA:3.40.50.1360 7 207 7.6E-76 T 14-10-2018 BD65_1285 2c8ace7aed0cbb1b98415e3736b94974 219 Gene3D G3DSA:3.30.70.260 125 196 7.6E-76 T 14-10-2018 BD65_1285 2c8ace7aed0cbb1b98415e3736b94974 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.5E-69 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BD65_1285 2c8ace7aed0cbb1b98415e3736b94974 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 4.8E-58 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BD65_1285 2c8ace7aed0cbb1b98415e3736b94974 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.161 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BD65_1285 2c8ace7aed0cbb1b98415e3736b94974 219 SUPERFAMILY SSF75445 127 198 8.63E-24 T 14-10-2018 BD65_2441 ff349121ca92673f0b2125b004aabc25 146 SUPERFAMILY SSF53062 1 129 1.83E-35 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BD65_2441 ff349121ca92673f0b2125b004aabc25 146 Pfam PF03610 PTS system fructose IIA component 3 115 2.7E-27 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 BD65_2441 ff349121ca92673f0b2125b004aabc25 146 Gene3D G3DSA:3.40.50.510 1 144 1.1E-36 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BD65_2229 4d06cdcbdaa96a508fb6a347610bdc61 38 SUPERFAMILY SSF57840 1 38 5.49E-17 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2229 4d06cdcbdaa96a508fb6a347610bdc61 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 4.7E-22 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2229 4d06cdcbdaa96a508fb6a347610bdc61 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.971 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2229 4d06cdcbdaa96a508fb6a347610bdc61 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2229 4d06cdcbdaa96a508fb6a347610bdc61 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 14-10-2018 BD65_2229 4d06cdcbdaa96a508fb6a347610bdc61 38 Pfam PF00444 Ribosomal protein L36 1 38 1.7E-20 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2078 6757e7b15ecd53601a6933d20dc940d1 334 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2078 6757e7b15ecd53601a6933d20dc940d1 334 SMART SM00382 46 238 4.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2078 6757e7b15ecd53601a6933d20dc940d1 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 323 2.0E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_2078 6757e7b15ecd53601a6933d20dc940d1 334 SUPERFAMILY SSF52540 12 260 2.03E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2078 6757e7b15ecd53601a6933d20dc940d1 334 Pfam PF00005 ABC transporter 37 188 1.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2078 6757e7b15ecd53601a6933d20dc940d1 334 Gene3D G3DSA:3.40.50.300 10 332 7.1E-95 T 14-10-2018 BD65_2078 6757e7b15ecd53601a6933d20dc940d1 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 1.7E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_2598 cf354ff45b1f72e688931e437280c935 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 2.7E-118 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BD65_2598 cf354ff45b1f72e688931e437280c935 264 SUPERFAMILY SSF51621 4 263 1.05E-103 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BD65_2598 cf354ff45b1f72e688931e437280c935 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.399 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BD65_2598 cf354ff45b1f72e688931e437280c935 264 Gene3D G3DSA:3.20.20.60 1 263 2.0E-102 T 14-10-2018 BD65_2598 cf354ff45b1f72e688931e437280c935 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 1.9E-104 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BD65_2598 cf354ff45b1f72e688931e437280c935 264 PIRSF PIRSF000388 1 264 1.2E-95 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BD65_2383 e4656689dc08bda6ae3b4e38f66f0df9 150 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 149 1.7E-52 T 14-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_2383 e4656689dc08bda6ae3b4e38f66f0df9 150 Pfam PF06754 Phosphonate metabolism protein PhnG 6 148 1.7E-53 T 14-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 2.6E-39 T 14-10-2018 IPR006512 YidE/YbjL duplication BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 541 1.1E-45 T 14-10-2018 IPR006512 YidE/YbjL duplication BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 Pfam PF06826 Predicted Permease Membrane Region 385 554 8.2E-42 T 14-10-2018 IPR006512 YidE/YbjL duplication BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 Pfam PF06826 Predicted Permease Membrane Region 17 181 8.2E-39 T 14-10-2018 IPR006512 YidE/YbjL duplication BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 58.871 T 14-10-2018 IPR023017 Transport protein YbjL, putative BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 Pfam PF02080 TrkA-C domain 305 372 4.1E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 Pfam PF02080 TrkA-C domain 227 278 5.8E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 SUPERFAMILY SSF116726 227 282 1.7E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 Gene3D G3DSA:3.30.70.1450 299 373 1.1E-6 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 SUPERFAMILY SSF116726 291 374 1.05E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_3193 b296b223e1d9a2e8d3cd90a0e0f8e5ad 562 Gene3D G3DSA:3.30.70.1450 223 285 2.0E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_1071 7be7cb551cbe64f9bf34054ba7ad1ec0 486 SUPERFAMILY SSF53955 290 451 3.56E-37 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_1071 7be7cb551cbe64f9bf34054ba7ad1ec0 486 Gene3D G3DSA:3.40.190.10 129 224 1.4E-61 T 14-10-2018 BD65_1071 7be7cb551cbe64f9bf34054ba7ad1ec0 486 SMART SM00062 44 268 4.1E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_1071 7be7cb551cbe64f9bf34054ba7ad1ec0 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BD65_1071 7be7cb551cbe64f9bf34054ba7ad1ec0 486 SUPERFAMILY SSF53850 45 267 5.2E-37 T 14-10-2018 BD65_1071 7be7cb551cbe64f9bf34054ba7ad1ec0 486 Pfam PF01464 Transglycosylase SLT domain 296 402 2.5E-25 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 BD65_1071 7be7cb551cbe64f9bf34054ba7ad1ec0 486 Gene3D G3DSA:1.10.530.10 286 468 7.0E-36 T 14-10-2018 BD65_1071 7be7cb551cbe64f9bf34054ba7ad1ec0 486 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 475 49.667 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 BD65_1071 7be7cb551cbe64f9bf34054ba7ad1ec0 486 Gene3D G3DSA:3.40.190.10 38 263 1.4E-61 T 14-10-2018 BD65_1071 7be7cb551cbe64f9bf34054ba7ad1ec0 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 267 1.4E-32 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 Hamap MF_00318 Enolase [eno]. 2 416 43.944 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 Pfam PF03952 Enolase, N-terminal domain 4 134 8.7E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 6.2E-140 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 2.9E-205 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 SMART SM01192 143 430 6.3E-212 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 Gene3D G3DSA:3.20.20.120 128 431 9.5E-136 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 SMART SM01193 4 134 4.1E-92 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 Gene3D G3DSA:3.30.390.10 3 127 1.9E-54 T 14-10-2018 IPR029017 Enolase-like, N-terminal BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 PIRSF PIRSF001400 1 429 7.1E-191 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 SUPERFAMILY SSF51604 143 427 9.62E-127 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 SUPERFAMILY SSF54826 3 138 1.34E-55 T 14-10-2018 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 PRINTS PR00148 Enolase signature 368 385 1.2E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 PRINTS PR00148 Enolase signature 316 327 1.2E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_2620 289dfc3d498b39e8aa2516f28d0f5c89 431 PRINTS PR00148 Enolase signature 339 353 1.2E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BD65_3006 1f3998a1bbac6622feac96c951624be9 255 SUPERFAMILY SSF53474 6 253 2.04E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_3006 1f3998a1bbac6622feac96c951624be9 255 PRINTS PR00412 Epoxide hydrolase signature 229 251 6.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BD65_3006 1f3998a1bbac6622feac96c951624be9 255 PRINTS PR00412 Epoxide hydrolase signature 42 57 6.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BD65_3006 1f3998a1bbac6622feac96c951624be9 255 Pfam PF12697 Alpha/beta hydrolase family 19 246 5.4E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BD65_3006 1f3998a1bbac6622feac96c951624be9 255 Gene3D G3DSA:3.40.50.1820 1 253 3.1E-75 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_3006 1f3998a1bbac6622feac96c951624be9 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 1.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BD65_3006 1f3998a1bbac6622feac96c951624be9 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 1.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BD65_3006 1f3998a1bbac6622feac96c951624be9 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 210 712 5.8E-81 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 SUPERFAMILY SSF81653 240 337 2.75E-20 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 SUPERFAMILY SSF55008 48 111 5.37E-15 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 SUPERFAMILY SSF56784 436 734 8.25E-53 T 14-10-2018 IPR036412 HAD-like superfamily BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 440 446 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 ProSitePatterns PS01047 Heavy-metal-associated domain. 54 83 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 PRINTS PR00941 Cadmium-transporting ATPase signature 52 61 7.0E-7 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 PRINTS PR00941 Cadmium-transporting ATPase signature 242 258 7.0E-7 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 PRINTS PR00941 Cadmium-transporting ATPase signature 63 84 7.0E-7 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 PRINTS PR00941 Cadmium-transporting ATPase signature 222 242 7.0E-7 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 187 736 3.3E-176 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 Pfam PF00702 haloacid dehalogenase-like hydrolase 434 647 6.5E-38 T 14-10-2018 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 Gene3D G3DSA:3.30.70.100 47 114 2.3E-17 T 14-10-2018 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 SUPERFAMILY SSF81665 190 722 5.36E-18 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 287 301 6.5E-29 T 14-10-2018 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 438 452 6.5E-29 T 14-10-2018 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 572 6.5E-29 T 14-10-2018 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 669 6.5E-29 T 14-10-2018 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 583 593 6.5E-29 T 14-10-2018 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 653 6.5E-29 T 14-10-2018 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 Gene3D G3DSA:2.70.150.20 237 342 3.7E-31 T 14-10-2018 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 Gene3D G3DSA:3.40.1110.10 449 568 4.2E-82 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 Pfam PF00403 Heavy-metal-associated domain 53 109 3.7E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 Gene3D G3DSA:3.40.50.1000 419 685 4.2E-82 T 14-10-2018 IPR023214 HAD superfamily BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 Pfam PF00122 E1-E2 ATPase 238 417 5.4E-45 T 14-10-2018 BD65_1728 84a8675c65a567e266f5d40c74f3e7e5 742 ProSitePatterns PS01229 Hypothetical cof family signature 2. 634 656 - T 14-10-2018 BD65_2277 fdb215676ccfc908360c01c4bca8abb4 130 Pfam PF02300 Fumarate reductase subunit C 3 128 8.3E-55 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 BD65_2277 fdb215676ccfc908360c01c4bca8abb4 130 PIRSF PIRSF000180 2 130 3.0E-57 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 BD65_2277 fdb215676ccfc908360c01c4bca8abb4 130 SUPERFAMILY SSF81343 2 129 1.06E-56 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2277 fdb215676ccfc908360c01c4bca8abb4 130 Gene3D G3DSA:1.20.1300.10 2 130 1.0E-51 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2277 fdb215676ccfc908360c01c4bca8abb4 130 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.606 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 BD65_2277 fdb215676ccfc908360c01c4bca8abb4 130 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 111 2.0E-49 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 BD65_2559 15f2699917954a150d57d92c1ce161cf 282 Pfam PF03799 Cell division protein FtsQ 132 246 1.7E-25 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB BD65_2559 15f2699917954a150d57d92c1ce161cf 282 Gene3D G3DSA:3.10.20.310 60 128 2.5E-33 T 14-10-2018 BD65_2559 15f2699917954a150d57d92c1ce161cf 282 Pfam PF08478 POTRA domain, FtsQ-type 59 128 2.8E-22 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type BD65_2559 15f2699917954a150d57d92c1ce161cf 282 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 28 254 24.982 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 BD65_2559 15f2699917954a150d57d92c1ce161cf 282 Gene3D G3DSA:3.40.50.11690 129 261 2.3E-48 T 14-10-2018 BD65_246 05799fc1730e9bf24a56ebfd897fca87 337 SUPERFAMILY SSF52172 6 130 3.56E-32 T 14-10-2018 IPR011006 CheY-like superfamily BD65_246 05799fc1730e9bf24a56ebfd897fca87 337 Gene3D G3DSA:3.60.40.10 138 319 4.4E-10 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BD65_246 05799fc1730e9bf24a56ebfd897fca87 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 55.074 T 14-10-2018 IPR028616 Regulator of RpoS BD65_246 05799fc1730e9bf24a56ebfd897fca87 337 Gene3D G3DSA:3.40.50.2300 2 130 1.4E-32 T 14-10-2018 BD65_246 05799fc1730e9bf24a56ebfd897fca87 337 SMART SM00448 8 120 6.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_246 05799fc1730e9bf24a56ebfd897fca87 337 Pfam PF00072 Response regulator receiver domain 10 119 2.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2521 b5dc2dcd4ac3de79f4f83de17731b4b8 125 Pfam PF04379 ApaG domain 18 102 1.3E-33 T 14-10-2018 IPR007474 ApaG domain BD65_2521 b5dc2dcd4ac3de79f4f83de17731b4b8 125 SUPERFAMILY SSF110069 5 125 3.66E-47 T 14-10-2018 IPR036767 ApaG domain superfamily BD65_2521 b5dc2dcd4ac3de79f4f83de17731b4b8 125 Gene3D G3DSA:2.60.40.1470 1 125 1.9E-45 T 14-10-2018 IPR036767 ApaG domain superfamily BD65_2521 b5dc2dcd4ac3de79f4f83de17731b4b8 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.602 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG BD65_2820 e43f67169c39d0132c1c1fc495fdd894 163 Gene3D G3DSA:3.30.70.860 98 163 9.4E-32 T 14-10-2018 IPR035571 UPF0234-like, C-terminal BD65_2820 e43f67169c39d0132c1c1fc495fdd894 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.012 T 14-10-2018 IPR007551 Protein of unknown function DUF520 BD65_2820 e43f67169c39d0132c1c1fc495fdd894 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 2.9E-65 T 14-10-2018 IPR007551 Protein of unknown function DUF520 BD65_2820 e43f67169c39d0132c1c1fc495fdd894 163 SUPERFAMILY SSF89963 91 163 2.88E-29 T 14-10-2018 IPR036183 YajQ-like superfamily BD65_2820 e43f67169c39d0132c1c1fc495fdd894 163 SUPERFAMILY SSF89963 2 88 1.28E-29 T 14-10-2018 IPR036183 YajQ-like superfamily BD65_2820 e43f67169c39d0132c1c1fc495fdd894 163 Gene3D G3DSA:3.30.70.990 9 97 2.4E-32 T 14-10-2018 IPR035570 UPF0234, N-terminal BD65_2486 b95aa54366b43c7a3275c1029f6f17f2 113 Gene3D G3DSA:1.10.1270.10 9 108 3.7E-37 T 14-10-2018 IPR038116 TrpR-like superfamily BD65_2486 b95aa54366b43c7a3275c1029f6f17f2 113 TIGRFAM TIGR01321 TrpR: trp operon repressor 14 104 6.2E-35 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 BD65_2486 b95aa54366b43c7a3275c1029f6f17f2 113 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 2.0E-34 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 BD65_2486 b95aa54366b43c7a3275c1029f6f17f2 113 PIRSF PIRSF003196 1 109 4.6E-41 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 BD65_2486 b95aa54366b43c7a3275c1029f6f17f2 113 Pfam PF01371 Trp repressor protein 17 103 8.0E-30 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 BD65_2486 b95aa54366b43c7a3275c1029f6f17f2 113 SUPERFAMILY SSF48295 6 104 1.15E-28 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BD65_2486 b95aa54366b43c7a3275c1029f6f17f2 113 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 23.759 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 BD65_3040 4080977ea6e6c7ba24e528eb8795555b 133 SUPERFAMILY SSF54637 4 132 2.05E-38 T 14-10-2018 IPR029069 HotDog domain superfamily BD65_3040 4080977ea6e6c7ba24e528eb8795555b 133 Gene3D G3DSA:3.10.129.10 1 133 2.9E-41 T 14-10-2018 BD65_3040 4080977ea6e6c7ba24e528eb8795555b 133 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 14-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 BD65_3040 4080977ea6e6c7ba24e528eb8795555b 133 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 4.3E-50 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 BD65_3040 4080977ea6e6c7ba24e528eb8795555b 133 Pfam PF03061 Thioesterase superfamily 20 103 7.7E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BD65_3040 4080977ea6e6c7ba24e528eb8795555b 133 PIRSF PIRSF003230 1 133 1.6E-46 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BD65_3040 4080977ea6e6c7ba24e528eb8795555b 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 1.2E-42 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 407 5.5E-157 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 Pfam PF01546 Peptidase family M20/M25/M40 139 402 6.4E-16 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 Gene3D G3DSA:3.30.70.360 208 319 9.1E-176 T 14-10-2018 BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 SUPERFAMILY SSF55031 208 320 1.67E-41 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 Pfam PF07687 Peptidase dimerisation domain 205 302 4.3E-10 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 Hamap MF_00550 Peptidase T [pepT]. 1 404 55.266 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 PIRSF PIRSF037215 1 408 2.8E-182 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 SUPERFAMILY SSF53187 1 402 5.19E-80 T 14-10-2018 BD65_80 20d45700803a3aac44cf8d0550b7f5b3 423 Gene3D G3DSA:3.40.630.10 4 400 9.1E-176 T 14-10-2018 BD65_3184 fff21aaa516a55458c932363694b6585 381 PIRSF PIRSF001434 1 381 7.1E-147 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_3184 fff21aaa516a55458c932363694b6585 381 Gene3D G3DSA:3.40.640.10 2 247 1.8E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_3184 fff21aaa516a55458c932363694b6585 381 SUPERFAMILY SSF53383 16 380 1.04E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_3184 fff21aaa516a55458c932363694b6585 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_3184 fff21aaa516a55458c932363694b6585 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 379 9.2E-153 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_3184 fff21aaa516a55458c932363694b6585 381 Gene3D G3DSA:3.90.1150.10 248 381 2.8E-57 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 Gene3D G3DSA:2.40.50.100 108 182 1.8E-24 T 14-10-2018 BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 2.7E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 Gene3D G3DSA:2.40.50.100 183 253 4.2E-19 T 14-10-2018 BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 Pfam PF03459 TOBE domain 198 259 1.2E-11 T 14-10-2018 IPR005116 Transport-associated OB, type 1 BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 Pfam PF03459 TOBE domain 124 188 1.5E-16 T 14-10-2018 IPR005116 Transport-associated OB, type 1 BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 PIRSF PIRSF005763 1 263 7.1E-97 T 14-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 191 1.3E-26 T 14-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 SUPERFAMILY SSF50331 122 191 8.5E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 SUPERFAMILY SSF46785 2 108 9.98E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 SUPERFAMILY SSF50331 171 259 1.28E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 Gene3D G3DSA:1.10.10.10 1 107 4.4E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_3062 487b9e61fad6143ede86c05e51a4b1b5 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 111 1.8E-37 T 14-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal BD65_108 8359ce012cb7b3b8294dc4446fafd9a3 262 Gene3D G3DSA:3.90.420.10 85 261 3.2E-45 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BD65_108 8359ce012cb7b3b8294dc4446fafd9a3 262 SUPERFAMILY SSF56524 60 261 2.22E-59 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BD65_108 8359ce012cb7b3b8294dc4446fafd9a3 262 Pfam PF00174 Oxidoreductase molybdopterin binding domain 110 251 7.3E-27 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 BD65_3206 dd0a20820b6b5631c247c922e5b9d2c4 243 SUPERFAMILY SSF53850 1 242 1.38E-72 T 14-10-2018 BD65_3206 dd0a20820b6b5631c247c922e5b9d2c4 243 SMART SM00079 22 243 1.8E-5 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BD65_3206 dd0a20820b6b5631c247c922e5b9d2c4 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site BD65_3206 dd0a20820b6b5631c247c922e5b9d2c4 243 Gene3D G3DSA:3.40.190.10 26 240 1.7E-82 T 14-10-2018 BD65_3206 dd0a20820b6b5631c247c922e5b9d2c4 243 Gene3D G3DSA:3.40.190.10 108 201 1.7E-82 T 14-10-2018 BD65_3206 dd0a20820b6b5631c247c922e5b9d2c4 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 4.9E-69 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_3206 dd0a20820b6b5631c247c922e5b9d2c4 243 SMART SM00062 22 241 2.3E-85 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_3206 dd0a20820b6b5631c247c922e5b9d2c4 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 3.7E-88 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 BD65_188 6b690777746483a37efdbe8525f6f906 438 SUPERFAMILY SSF51261 162 406 1.62E-69 T 14-10-2018 IPR011055 Duplicated hybrid motif BD65_188 6b690777746483a37efdbe8525f6f906 438 Gene3D G3DSA:3.10.450.350 178 280 9.2E-32 T 14-10-2018 BD65_188 6b690777746483a37efdbe8525f6f906 438 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 9.4E-8 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal BD65_188 6b690777746483a37efdbe8525f6f906 438 Gene3D G3DSA:3.10.450.350 83 173 1.0E-11 T 14-10-2018 BD65_188 6b690777746483a37efdbe8525f6f906 438 Gene3D G3DSA:2.70.70.10 282 411 3.2E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif BD65_188 6b690777746483a37efdbe8525f6f906 438 Pfam PF04225 Opacity-associated protein A LysM-like domain 95 159 3.4E-6 T 14-10-2018 IPR007340 Opacity-associated protein A BD65_188 6b690777746483a37efdbe8525f6f906 438 Pfam PF01551 Peptidase family M23 311 405 4.7E-33 T 14-10-2018 IPR016047 Peptidase M23 BD65_188 6b690777746483a37efdbe8525f6f906 438 SMART SM00257 96 141 7.4E-4 T 14-10-2018 IPR018392 LysM domain BD65_1282 0a5eb3c326c082716ff5c4c1cd089a4b 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 33.686 T 14-10-2018 IPR023771 Cell division protein ZapA, eubacteria BD65_1282 0a5eb3c326c082716ff5c4c1cd089a4b 109 Gene3D G3DSA:1.10.20.30 1 47 5.0E-26 T 14-10-2018 BD65_1282 0a5eb3c326c082716ff5c4c1cd089a4b 109 Pfam PF05164 Cell division protein ZapA 6 90 2.6E-19 T 14-10-2018 IPR007838 Cell division protein ZapA-like BD65_1282 0a5eb3c326c082716ff5c4c1cd089a4b 109 Gene3D G3DSA:1.20.5.50 48 102 4.1E-6 T 14-10-2018 BD65_1282 0a5eb3c326c082716ff5c4c1cd089a4b 109 SUPERFAMILY SSF102829 6 94 4.97E-25 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily BD65_536 69a675c216cb1934aab28216f80ab4f7 78 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 3 62 8.7E-20 T 14-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system BD65_2165 e59110a4516ec2c3c63b5f737e0a946c 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site BD65_2165 e59110a4516ec2c3c63b5f737e0a946c 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site BD65_2165 e59110a4516ec2c3c63b5f737e0a946c 268 Pfam PF01226 Formate/nitrite transporter 20 247 5.0E-58 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BD65_2165 e59110a4516ec2c3c63b5f737e0a946c 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 20 250 8.1E-81 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BD65_2165 e59110a4516ec2c3c63b5f737e0a946c 268 Gene3D G3DSA:1.20.1080.10 1 259 1.6E-92 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BD65_579 471ba58e9bf4be5f98b7ae2802dd9dd1 569 SUPERFAMILY SSF56519 55 227 2.75E-44 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BD65_579 471ba58e9bf4be5f98b7ae2802dd9dd1 569 Gene3D G3DSA:3.40.710.10 289 469 2.7E-101 T 14-10-2018 BD65_579 471ba58e9bf4be5f98b7ae2802dd9dd1 569 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 213 4.2E-16 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BD65_579 471ba58e9bf4be5f98b7ae2802dd9dd1 569 SUPERFAMILY SSF56601 228 556 3.48E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_579 471ba58e9bf4be5f98b7ae2802dd9dd1 569 Gene3D G3DSA:3.90.1310.30 52 228 3.5E-43 T 14-10-2018 BD65_579 471ba58e9bf4be5f98b7ae2802dd9dd1 569 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 12 563 44.307 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_579 471ba58e9bf4be5f98b7ae2802dd9dd1 569 Gene3D G3DSA:3.30.450.330 230 543 2.7E-101 T 14-10-2018 BD65_579 471ba58e9bf4be5f98b7ae2802dd9dd1 569 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 547 2.0E-77 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BD65_3138 a43129cfec2b2f0894c0cde0532fb6ea 383 Gene3D G3DSA:1.20.1250.20 1 381 4.3E-12 T 14-10-2018 BD65_3138 a43129cfec2b2f0894c0cde0532fb6ea 383 SUPERFAMILY SSF103473 6 371 5.49E-19 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_3138 a43129cfec2b2f0894c0cde0532fb6ea 383 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 13 370 1.8E-84 T 14-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB BD65_1194 e061c79c4ec6d213934f479999b354ab 285 SUPERFAMILY SSF54713 144 283 1.09E-52 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BD65_1194 e061c79c4ec6d213934f479999b354ab 285 SUPERFAMILY SSF46934 4 55 8.98E-18 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 BD65_1194 e061c79c4ec6d213934f479999b354ab 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 7.6E-116 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BD65_1194 e061c79c4ec6d213934f479999b354ab 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BD65_1194 e061c79c4ec6d213934f479999b354ab 285 Pfam PF00889 Elongation factor TS 73 265 2.6E-66 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 BD65_1194 e061c79c4ec6d213934f479999b354ab 285 SUPERFAMILY SSF54713 56 141 3.92E-21 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BD65_1194 e061c79c4ec6d213934f479999b354ab 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 79.421 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BD65_1194 e061c79c4ec6d213934f479999b354ab 285 Gene3D G3DSA:3.30.479.20 57 143 2.9E-30 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BD65_1194 e061c79c4ec6d213934f479999b354ab 285 Gene3D G3DSA:1.10.8.10 1 56 3.2E-25 T 14-10-2018 BD65_1194 e061c79c4ec6d213934f479999b354ab 285 Gene3D G3DSA:1.10.286.20 189 228 1.1E-23 T 14-10-2018 BD65_2548 f05b48279aaf5c8538d06c8d4d325a78 313 PIRSF PIRSF004486 1 312 1.4E-100 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BD65_2548 f05b48279aaf5c8538d06c8d4d325a78 313 Gene3D G3DSA:3.40.50.150 10 310 4.5E-107 T 14-10-2018 BD65_2548 f05b48279aaf5c8538d06c8d4d325a78 313 SUPERFAMILY SSF53335 7 311 1.45E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2548 f05b48279aaf5c8538d06c8d4d325a78 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 310 1.2E-126 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BD65_2548 f05b48279aaf5c8538d06c8d4d325a78 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 38.6 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BD65_2548 f05b48279aaf5c8538d06c8d4d325a78 313 Pfam PF01795 MraW methylase family 5 310 3.4E-116 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BD65_2548 f05b48279aaf5c8538d06c8d4d325a78 313 SUPERFAMILY SSF81799 114 213 4.19E-34 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BD65_2548 f05b48279aaf5c8538d06c8d4d325a78 313 Gene3D G3DSA:1.10.150.170 112 214 4.5E-107 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BD65_2619 42b40b2490eaec732afdf53a47740f8f 545 Pfam PF06418 CTP synthase N-terminus 5 266 4.5E-126 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BD65_2619 42b40b2490eaec732afdf53a47740f8f 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.1E-63 T 14-10-2018 IPR017926 Glutamine amidotransferase BD65_2619 42b40b2490eaec732afdf53a47740f8f 545 Gene3D G3DSA:3.40.50.880 287 545 4.7E-106 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_2619 42b40b2490eaec732afdf53a47740f8f 545 Gene3D G3DSA:3.40.50.300 1 285 6.3E-136 T 14-10-2018 BD65_2619 42b40b2490eaec732afdf53a47740f8f 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.173 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BD65_2619 42b40b2490eaec732afdf53a47740f8f 545 SUPERFAMILY SSF52540 3 269 3.61E-122 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2619 42b40b2490eaec732afdf53a47740f8f 545 SUPERFAMILY SSF52317 289 541 7.34E-88 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_2619 42b40b2490eaec732afdf53a47740f8f 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 6.4E-263 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BD65_2307 d943a6c63da8403b6069207b623e4b81 809 Gene3D G3DSA:2.60.40.2610 634 725 6.5E-19 T 14-10-2018 BD65_2307 d943a6c63da8403b6069207b623e4b81 809 Pfam PF13953 PapC C-terminal domain 730 793 7.1E-8 T 14-10-2018 IPR025949 PapC-like, C-terminal domain BD65_2307 d943a6c63da8403b6069207b623e4b81 809 SUPERFAMILY SSF141729 38 145 2.79E-7 T 14-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 BD65_2307 d943a6c63da8403b6069207b623e4b81 809 Pfam PF00577 Outer membrane usher protein 181 721 7.5E-82 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BD65_2307 d943a6c63da8403b6069207b623e4b81 809 Pfam PF13954 PapC N-terminal domain 39 168 3.5E-10 T 14-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 BD65_2307 d943a6c63da8403b6069207b623e4b81 809 Gene3D G3DSA:2.60.40.3110 253 334 2.5E-19 T 14-10-2018 BD65_1003 affe463733b3b5a090e945b310d8e3fc 519 SUPERFAMILY SSF53067 14 134 1.01E-36 T 14-10-2018 BD65_1003 affe463733b3b5a090e945b310d8e3fc 519 SUPERFAMILY SSF109604 314 508 3.45E-56 T 14-10-2018 BD65_1003 affe463733b3b5a090e945b310d8e3fc 519 Gene3D G3DSA:3.30.420.150 118 296 2.4E-98 T 14-10-2018 BD65_1003 affe463733b3b5a090e945b310d8e3fc 519 Gene3D G3DSA:1.10.3210.10 311 516 8.7E-82 T 14-10-2018 BD65_1003 affe463733b3b5a090e945b310d8e3fc 519 Gene3D G3DSA:3.30.420.40 15 304 2.4E-98 T 14-10-2018 BD65_1003 affe463733b3b5a090e945b310d8e3fc 519 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 307 3.9E-100 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 BD65_1003 affe463733b3b5a090e945b310d8e3fc 519 Pfam PF02541 Ppx/GppA phosphatase family 27 309 3.7E-98 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 BD65_1003 affe463733b3b5a090e945b310d8e3fc 519 PIRSF PIRSF001267 4 507 9.4E-204 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 BD65_1003 affe463733b3b5a090e945b310d8e3fc 519 SUPERFAMILY SSF53067 138 311 3.35E-48 T 14-10-2018 BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 SMART SM00842 10 196 1.3E-96 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 Gene3D G3DSA:3.90.640.10 235 300 2.0E-115 T 14-10-2018 BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.645 T 14-10-2018 IPR020823 Cell division protein FtsA BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.5E-161 T 14-10-2018 IPR020823 Cell division protein FtsA BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 Gene3D G3DSA:3.30.420.40 197 359 2.0E-115 T 14-10-2018 BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 Gene3D G3DSA:3.30.1490.110 87 169 2.0E-115 T 14-10-2018 BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 PIRSF PIRSF003101 1 418 1.0E-153 T 14-10-2018 IPR020823 Cell division protein FtsA BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 SUPERFAMILY SSF53067 8 223 3.56E-62 T 14-10-2018 BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 Pfam PF14450 Cell division protein FtsA 207 381 2.0E-24 T 14-10-2018 BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 3.5E-30 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 Gene3D G3DSA:3.30.420.40 13 379 2.0E-115 T 14-10-2018 BD65_2560 aff45d9b7699e242f7d2c26714ce20ea 418 SUPERFAMILY SSF53067 198 384 2.29E-47 T 14-10-2018 BD65_1549 e0c7d34c17965556d430ea34071416aa 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 377 2.1E-18 T 14-10-2018 IPR000160 GGDEF domain BD65_1549 e0c7d34c17965556d430ea34071416aa 638 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 33 130 1.3E-29 T 14-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 BD65_1549 e0c7d34c17965556d430ea34071416aa 638 SUPERFAMILY SSF141868 399 630 1.1E-34 T 14-10-2018 IPR035919 EAL domain superfamily BD65_1549 e0c7d34c17965556d430ea34071416aa 638 Gene3D G3DSA:3.30.70.270 207 383 3.6E-18 T 14-10-2018 BD65_1549 e0c7d34c17965556d430ea34071416aa 638 Gene3D G3DSA:3.20.20.450 392 628 2.8E-32 T 14-10-2018 IPR035919 EAL domain superfamily BD65_1549 e0c7d34c17965556d430ea34071416aa 638 Pfam PF00563 EAL domain 400 627 2.2E-37 T 14-10-2018 IPR001633 EAL domain BD65_1549 e0c7d34c17965556d430ea34071416aa 638 SUPERFAMILY SSF55073 230 384 3.45E-16 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_1549 e0c7d34c17965556d430ea34071416aa 638 SMART SM00052 392 632 1.9E-24 T 14-10-2018 IPR001633 EAL domain BD65_1549 e0c7d34c17965556d430ea34071416aa 638 SMART SM00267 213 382 1.9E-14 T 14-10-2018 IPR000160 GGDEF domain BD65_199 b400041882a687020b421df645753ac4 195 Pfam PF03843 Outer membrane lipoprotein Slp family 22 168 1.5E-48 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BD65_199 b400041882a687020b421df645753ac4 195 PIRSF PIRSF004982 9 191 9.1E-50 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BD65_199 b400041882a687020b421df645753ac4 195 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 16 191 1.4E-61 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BD65_2941 32a85a284e4f87572c7e7b7bdd7c1eaf 387 Gene3D G3DSA:3.90.550.10 1 251 3.8E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2941 32a85a284e4f87572c7e7b7bdd7c1eaf 387 Pfam PF00483 Nucleotidyl transferase 2 246 1.7E-47 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BD65_2941 32a85a284e4f87572c7e7b7bdd7c1eaf 387 SUPERFAMILY SSF51161 256 333 2.21E-11 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BD65_2941 32a85a284e4f87572c7e7b7bdd7c1eaf 387 SUPERFAMILY SSF53448 1 307 1.17E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2941 32a85a284e4f87572c7e7b7bdd7c1eaf 387 Gene3D G3DSA:2.160.10.10 262 345 2.9E-10 T 14-10-2018 BD65_2941 32a85a284e4f87572c7e7b7bdd7c1eaf 387 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 283 315 1.2E-4 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_34 4cc01ed95edf906ee3ee5d437e0d1f06 169 SUPERFAMILY SSF143422 6 135 3.14E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_34 4cc01ed95edf906ee3ee5d437e0d1f06 169 Gene3D G3DSA:3.30.70.1290 5 141 1.6E-41 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_34 4cc01ed95edf906ee3ee5d437e0d1f06 169 Pfam PF01797 Transposase IS200 like 16 134 4.6E-40 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_34 4cc01ed95edf906ee3ee5d437e0d1f06 169 SMART SM01321 14 134 1.5E-42 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_137 22c58170d95fbff4f690fd00ed4c13ea 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 135 10.629 T 14-10-2018 IPR022907 VapC family GO:0004540 BD65_137 22c58170d95fbff4f690fd00ed4c13ea 138 SUPERFAMILY SSF88723 3 136 1.35E-29 T 14-10-2018 IPR029060 PIN-like domain superfamily BD65_137 22c58170d95fbff4f690fd00ed4c13ea 138 Pfam PF01850 PIN domain 5 129 4.2E-12 T 14-10-2018 IPR002716 PIN domain BD65_137 22c58170d95fbff4f690fd00ed4c13ea 138 Gene3D G3DSA:3.40.50.1010 2 137 4.4E-34 T 14-10-2018 BD65_1997 b6fdd3d1c32a912eb63cb6ca65afe48c 318 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 4.4E-93 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 BD65_1997 b6fdd3d1c32a912eb63cb6ca65afe48c 318 SUPERFAMILY SSF161098 28 304 9.81E-34 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1997 b6fdd3d1c32a912eb63cb6ca65afe48c 318 Gene3D G3DSA:1.10.3720.10 70 316 2.5E-32 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1997 b6fdd3d1c32a912eb63cb6ca65afe48c 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 307 3.6E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_520 f833a76e5caf8f42f6515df03a27d574 237 SUPERFAMILY SSF48657 5 119 3.14E-39 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily BD65_520 f833a76e5caf8f42f6515df03a27d574 237 Pfam PF17516 ProQ C-terminal domain 187 237 7.9E-25 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal BD65_520 f833a76e5caf8f42f6515df03a27d574 237 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 237 30.885 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 BD65_520 f833a76e5caf8f42f6515df03a27d574 237 Gene3D G3DSA:1.10.1710.10 1 129 1.1E-24 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily BD65_520 f833a76e5caf8f42f6515df03a27d574 237 SMART SM00945 5 119 1.1E-60 T 14-10-2018 IPR016103 ProQ/FinO domain BD65_520 f833a76e5caf8f42f6515df03a27d574 237 Pfam PF04352 ProQ/FINO family 8 115 1.1E-42 T 14-10-2018 IPR016103 ProQ/FinO domain BD65_2349 112b56ab7772430326f9a3545b761a15 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.577 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 SUPERFAMILY SSF55957 357 445 5.49E-21 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 Gene3D G3DSA:3.40.120.10 257 339 1.4E-64 T 14-10-2018 BD65_2349 112b56ab7772430326f9a3545b761a15 446 SUPERFAMILY SSF53738 156 256 1.69E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 Gene3D G3DSA:3.40.120.10 174 362 1.4E-64 T 14-10-2018 BD65_2349 112b56ab7772430326f9a3545b761a15 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.1E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.1E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.1E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 SUPERFAMILY SSF53738 2 181 1.14E-49 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 2.9E-195 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 Gene3D G3DSA:3.30.310.50 370 446 1.0E-23 T 14-10-2018 BD65_2349 112b56ab7772430326f9a3545b761a15 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 8.5E-20 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 7.4E-16 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 Gene3D G3DSA:3.40.120.10 3 154 1.3E-48 T 14-10-2018 BD65_2349 112b56ab7772430326f9a3545b761a15 446 SUPERFAMILY SSF53738 258 365 1.96E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 2.2E-45 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_2349 112b56ab7772430326f9a3545b761a15 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 3.8E-32 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BD65_1532 664f9bf77e1d982bbd0f17b0d8e371af 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 9.4E-61 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BD65_1532 664f9bf77e1d982bbd0f17b0d8e371af 446 SUPERFAMILY SSF111283 13 446 2.22E-129 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BD65_1532 664f9bf77e1d982bbd0f17b0d8e371af 446 Gene3D G3DSA:3.30.2290.10 7 232 3.8E-93 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BD65_761 cf2c70cb305ef400a3f000ed5ff49faa 360 SUPERFAMILY SSF81345 24 355 3.14E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_761 cf2c70cb305ef400a3f000ed5ff49faa 360 Pfam PF01032 FecCD transport family 42 355 1.5E-83 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BD65_761 cf2c70cb305ef400a3f000ed5ff49faa 360 Gene3D G3DSA:1.10.3470.10 27 359 8.3E-97 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_1706 ceeae702c2b77e2e22d17b307f36a93e 234 SUPERFAMILY SSF49354 23 140 4.71E-8 T 14-10-2018 IPR008962 PapD-like superfamily BD65_1706 ceeae702c2b77e2e22d17b307f36a93e 234 Gene3D G3DSA:2.60.40.10 25 155 1.9E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2961 5caf1c7716c913cd56c94dde578971f3 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BD65_2961 5caf1c7716c913cd56c94dde578971f3 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 5.0E-22 T 14-10-2018 BD65_2961 5caf1c7716c913cd56c94dde578971f3 220 Gene3D G3DSA:3.30.930.10 2 204 2.9E-62 T 14-10-2018 BD65_2961 5caf1c7716c913cd56c94dde578971f3 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 1.2E-5 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BD65_2961 5caf1c7716c913cd56c94dde578971f3 220 PIRSF PIRSF016262 1 209 6.6E-57 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BD65_2961 5caf1c7716c913cd56c94dde578971f3 220 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.521 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BD65_2961 5caf1c7716c913cd56c94dde578971f3 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 27 203 1.8E-73 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BD65_2961 5caf1c7716c913cd56c94dde578971f3 220 SUPERFAMILY SSF55681 4 205 4.06E-71 T 14-10-2018 BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 Gene3D G3DSA:3.30.870.10 112 308 4.6E-35 T 14-10-2018 BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 4.0E-7 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 SUPERFAMILY SSF56024 273 473 1.19E-49 T 14-10-2018 BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 Gene3D G3DSA:3.30.870.10 316 457 1.2E-25 T 14-10-2018 BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 Pfam PF13091 PLD-like domain 134 244 5.5E-11 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 Pfam PF13091 PLD-like domain 331 444 8.0E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 SMART SM00155 219 246 7.1E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 SMART SM00155 399 426 7.3E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 1.5E-206 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 SUPERFAMILY SSF56024 67 315 1.13E-47 T 14-10-2018 BD65_259 567323f503a1b03aedbabc4f3adcfc20 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 52.056 T 14-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 BD65_429 7cfdef62dddabaa3e0434f87530911c3 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BD65_429 7cfdef62dddabaa3e0434f87530911c3 143 SMART SM00347 22 123 1.5E-26 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_429 7cfdef62dddabaa3e0434f87530911c3 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 7.9E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_429 7cfdef62dddabaa3e0434f87530911c3 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 7.9E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_429 7cfdef62dddabaa3e0434f87530911c3 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 7.9E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_429 7cfdef62dddabaa3e0434f87530911c3 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 7.9E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_429 7cfdef62dddabaa3e0434f87530911c3 143 Pfam PF01047 MarR family 29 87 3.2E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BD65_429 7cfdef62dddabaa3e0434f87530911c3 143 Gene3D G3DSA:1.10.10.10 1 142 8.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_429 7cfdef62dddabaa3e0434f87530911c3 143 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 36.757 T 14-10-2018 IPR023071 Transcriptional regulator, SlyA BD65_429 7cfdef62dddabaa3e0434f87530911c3 143 SUPERFAMILY SSF46785 4 139 4.72E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_702 393366bbd33881870e8f20b39a0b0af5 145 Pfam PF05130 FlgN protein 2 134 4.4E-25 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 BD65_702 393366bbd33881870e8f20b39a0b0af5 145 SUPERFAMILY SSF140566 2 119 1.7E-18 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 BD65_702 393366bbd33881870e8f20b39a0b0af5 145 Gene3D G3DSA:1.20.58.300 3 119 9.5E-15 T 14-10-2018 BD65_2868 ae9726c7336e095a7816b0ecc0ad515a 110 PIRSF PIRSF004555 3 110 8.9E-39 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BD65_2868 ae9726c7336e095a7816b0ecc0ad515a 110 SUPERFAMILY SSF82607 11 104 1.2E-34 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BD65_2868 ae9726c7336e095a7816b0ecc0ad515a 110 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 3.5E-35 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BD65_2868 ae9726c7336e095a7816b0ecc0ad515a 110 Gene3D G3DSA:3.30.1310.10 1 110 6.5E-47 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BD65_2868 ae9726c7336e095a7816b0ecc0ad515a 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 22.979 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BD65_2868 ae9726c7336e095a7816b0ecc0ad515a 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 3.2E-41 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BD65_737 b5b0bdaeb574713324618fd8052f70ca 309 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 19 290 3.0E-105 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 BD65_737 b5b0bdaeb574713324618fd8052f70ca 309 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 20 288 2.9E-84 T 14-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 BD65_737 b5b0bdaeb574713324618fd8052f70ca 309 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 309 180.146 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 BD65_737 b5b0bdaeb574713324618fd8052f70ca 309 Gene3D G3DSA:1.10.4200.10 175 292 1.5E-5 T 14-10-2018 BD65_3099 7c997d9df5d89afc09fdbc20527d9536 113 Pfam PF01844 HNH endonuclease 27 75 1.3E-10 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 BD65_3099 7c997d9df5d89afc09fdbc20527d9536 113 SMART SM00507 15 70 1.1E-4 T 14-10-2018 IPR003615 HNH nuclease BD65_972 c57a6639b53e40cb50c355eac93afe67 168 SUPERFAMILY SSF54862 34 162 7.11E-19 T 14-10-2018 BD65_972 c57a6639b53e40cb50c355eac93afe67 168 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 160 1.9E-45 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 BD65_972 c57a6639b53e40cb50c355eac93afe67 168 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_972 c57a6639b53e40cb50c355eac93afe67 168 Pfam PF12838 4Fe-4S dicluster domain 111 158 1.3E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BD65_972 c57a6639b53e40cb50c355eac93afe67 168 Pfam PF12838 4Fe-4S dicluster domain 40 84 4.4E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BD65_972 c57a6639b53e40cb50c355eac93afe67 168 Gene3D G3DSA:3.30.70.20 104 167 2.1E-8 T 14-10-2018 BD65_972 c57a6639b53e40cb50c355eac93afe67 168 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 28 165 23.246 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 BD65_972 c57a6639b53e40cb50c355eac93afe67 168 Gene3D G3DSA:3.30.70.20 36 87 1.3E-7 T 14-10-2018 BD65_972 c57a6639b53e40cb50c355eac93afe67 168 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_1027 3ce0a1bea9bfae1a12ff8a30593c8761 72 Pfam PF07191 zinc-ribbons 4 68 6.5E-28 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 BD65_1027 3ce0a1bea9bfae1a12ff8a30593c8761 72 SUPERFAMILY SSF161187 1 70 6.54E-27 T 14-10-2018 BD65_1027 3ce0a1bea9bfae1a12ff8a30593c8761 72 Gene3D G3DSA:2.10.290.10 1 71 1.2E-26 T 14-10-2018 IPR029037 YfgJ-like BD65_1027 3ce0a1bea9bfae1a12ff8a30593c8761 72 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 2.0E-21 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 BD65_2314 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 9.1E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2314 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2314 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 20 75 4.2E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2314 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2314 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2314 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2314 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2314 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2314 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2314 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2314 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 Gene3D G3DSA:3.40.50.720 3 277 2.3E-113 T 14-10-2018 BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 SUPERFAMILY SSF52283 4 109 3.83E-17 T 14-10-2018 BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 Gene3D G3DSA:3.30.1370.170 293 375 4.0E-33 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 46.752 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 Gene3D G3DSA:3.40.50.720 92 257 2.3E-113 T 14-10-2018 BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 279 2.1E-17 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 256 1.6E-31 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 SUPERFAMILY SSF51735 91 258 3.04E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 2.6E-30 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 BD65_879 19fad2263ac06f3adf2080e7e0ba87fa 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BD65_2609 bfbf4451e9e08c2fcb540646cf2557d2 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.467 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 BD65_2609 bfbf4451e9e08c2fcb540646cf2557d2 114 SUPERFAMILY SSF89360 8 103 5.69E-31 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BD65_2609 bfbf4451e9e08c2fcb540646cf2557d2 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BD65_2609 bfbf4451e9e08c2fcb540646cf2557d2 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 6.2E-39 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BD65_2609 bfbf4451e9e08c2fcb540646cf2557d2 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 2.0E-20 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BD65_2609 bfbf4451e9e08c2fcb540646cf2557d2 114 Gene3D G3DSA:2.60.300.12 9 114 5.3E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BD65_875 3167c84743506ded44e96856c80532b6 301 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 9.1E-149 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_875 3167c84743506ded44e96856c80532b6 301 SUPERFAMILY SSF52096 25 283 3.42E-87 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_875 3167c84743506ded44e96856c80532b6 301 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.294 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_875 3167c84743506ded44e96856c80532b6 301 Pfam PF01039 Carboxyl transferase domain 56 239 4.0E-18 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BD65_875 3167c84743506ded44e96856c80532b6 301 Gene3D G3DSA:3.90.226.10 25 287 1.0E-87 T 14-10-2018 BD65_875 3167c84743506ded44e96856c80532b6 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.5E-36 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_875 3167c84743506ded44e96856c80532b6 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.5E-36 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_875 3167c84743506ded44e96856c80532b6 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.5E-36 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_875 3167c84743506ded44e96856c80532b6 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.5E-36 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_875 3167c84743506ded44e96856c80532b6 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.5E-36 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_3164 0b0b2d61b99eb5a8e0186b7e1ba40a7b 528 SUPERFAMILY SSF54631 292 426 2.15E-24 T 14-10-2018 BD65_3164 0b0b2d61b99eb5a8e0186b7e1ba40a7b 528 Gene3D G3DSA:3.30.465.10 438 520 1.6E-20 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BD65_3164 0b0b2d61b99eb5a8e0186b7e1ba40a7b 528 SMART SM01091 441 520 1.3E-26 T 14-10-2018 IPR005170 Transporter-associated domain BD65_3164 0b0b2d61b99eb5a8e0186b7e1ba40a7b 528 Gene3D G3DSA:3.10.580.10 285 437 1.1E-39 T 14-10-2018 BD65_3164 0b0b2d61b99eb5a8e0186b7e1ba40a7b 528 Pfam PF03741 Integral membrane protein TerC family 15 203 2.2E-49 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BD65_3164 0b0b2d61b99eb5a8e0186b7e1ba40a7b 528 Pfam PF00571 CBS domain 375 424 2.8E-6 T 14-10-2018 IPR000644 CBS domain BD65_3164 0b0b2d61b99eb5a8e0186b7e1ba40a7b 528 Pfam PF00571 CBS domain 304 361 0.0014 T 14-10-2018 IPR000644 CBS domain BD65_3164 0b0b2d61b99eb5a8e0186b7e1ba40a7b 528 Pfam PF03471 Transporter associated domain 442 518 9.7E-19 T 14-10-2018 IPR005170 Transporter-associated domain BD65_3164 0b0b2d61b99eb5a8e0186b7e1ba40a7b 528 SUPERFAMILY SSF56176 439 523 6.27E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 9.7E-8 T 14-10-2018 IPR000014 PAS domain BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 8.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 SUPERFAMILY SSF55874 259 423 1.7E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.8E-28 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 4.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 2.2E-134 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 SUPERFAMILY SSF47384 190 268 3.92E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 SMART SM00388 203 269 1.8E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 SUPERFAMILY SSF55785 87 195 5.23E-11 T 14-10-2018 IPR035965 PAS domain superfamily BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 Gene3D G3DSA:1.10.287.130 200 269 9.3E-24 T 14-10-2018 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 SMART SM00091 98 164 6.3E-7 T 14-10-2018 IPR000014 PAS domain BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 SMART SM00387 313 425 4.9E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 Gene3D G3DSA:3.30.450.20 86 199 3.2E-8 T 14-10-2018 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 Pfam PF00989 PAS fold 99 184 2.8E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 6.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 6.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 6.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 6.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_2791 0db3ac70ff0f96df01e012a9989b4a14 438 Gene3D G3DSA:3.30.565.10 278 426 7.4E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2652 ba159fdb5b4842ee31f1df9712462f93 80 Gene3D G3DSA:1.20.120.160 3 80 1.1E-7 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_2652 ba159fdb5b4842ee31f1df9712462f93 80 Pfam PF01627 Hpt domain 5 70 4.4E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BD65_2652 ba159fdb5b4842ee31f1df9712462f93 80 SUPERFAMILY SSF47226 4 63 6.93E-8 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_2357 7df61e597a75907c5f93e7dab561f8a8 314 SUPERFAMILY SSF88697 251 310 1.29E-14 T 14-10-2018 IPR015947 PUA-like superfamily BD65_2357 7df61e597a75907c5f93e7dab561f8a8 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 3.4E-58 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 BD65_2357 7df61e597a75907c5f93e7dab561f8a8 314 Gene3D G3DSA:2.30.130.10 250 314 4.5E-29 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 BD65_2357 7df61e597a75907c5f93e7dab561f8a8 314 SUPERFAMILY SSF55120 10 248 2.82E-83 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2357 7df61e597a75907c5f93e7dab561f8a8 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 6.1E-20 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2357 7df61e597a75907c5f93e7dab561f8a8 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 19.154 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_2357 7df61e597a75907c5f93e7dab561f8a8 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 248 6.8E-24 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 BD65_2357 7df61e597a75907c5f93e7dab561f8a8 314 Gene3D G3DSA:3.30.2350.10 1 249 9.4E-94 T 14-10-2018 BD65_2357 7df61e597a75907c5f93e7dab561f8a8 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 4.4E-90 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_3170 67f5190cf8c901f88a96b6289ccfda35 245 Gene3D G3DSA:3.20.20.70 1 245 1.6E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_3170 67f5190cf8c901f88a96b6289ccfda35 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.43 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BD65_3170 67f5190cf8c901f88a96b6289ccfda35 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 5.5E-79 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BD65_3170 67f5190cf8c901f88a96b6289ccfda35 245 Pfam PF00977 Histidine biosynthesis protein 1 233 5.2E-77 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BD65_3170 67f5190cf8c901f88a96b6289ccfda35 245 SUPERFAMILY SSF51366 1 242 2.69E-66 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BD65_1617 166008be91e05222af4d6ba2c3d66652 258 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 51 9.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1617 166008be91e05222af4d6ba2c3d66652 258 SUPERFAMILY SSF46785 2 67 1.43E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1617 166008be91e05222af4d6ba2c3d66652 258 Gene3D G3DSA:1.10.10.10 1 80 8.2E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_319 126d03c0c2c718de19cb580418c70d08 665 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 5.3E-28 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain BD65_319 126d03c0c2c718de19cb580418c70d08 665 SUPERFAMILY SSF142019 94 303 2.22E-59 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_319 126d03c0c2c718de19cb580418c70d08 665 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 7.1E-179 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 BD65_319 126d03c0c2c718de19cb580418c70d08 665 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 665 237.516 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 BD65_319 126d03c0c2c718de19cb580418c70d08 665 Gene3D G3DSA:3.40.50.11540 144 287 6.5E-13 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_319 126d03c0c2c718de19cb580418c70d08 665 Gene3D G3DSA:1.10.1060.10 365 444 1.5E-11 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_319 126d03c0c2c718de19cb580418c70d08 665 Pfam PF10531 SLBB domain 296 344 5.5E-11 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_319 126d03c0c2c718de19cb580418c70d08 665 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_319 126d03c0c2c718de19cb580418c70d08 665 Pfam PF13237 4Fe-4S dicluster domain 373 427 2.0E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BD65_319 126d03c0c2c718de19cb580418c70d08 665 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_319 126d03c0c2c718de19cb580418c70d08 665 SUPERFAMILY SSF46548 336 443 5.93E-22 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_319 126d03c0c2c718de19cb580418c70d08 665 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 1.6E-47 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_204 9090530b9879930533cb06da080c9e32 227 SUPERFAMILY SSF63848 121 226 5.89E-31 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 BD65_204 9090530b9879930533cb06da080c9e32 227 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 226 3.2E-72 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BD65_204 9090530b9879930533cb06da080c9e32 227 Gene3D G3DSA:2.160.20.70 119 227 2.9E-29 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 BD65_204 9090530b9879930533cb06da080c9e32 227 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 227 28.688 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BD65_204 9090530b9879930533cb06da080c9e32 227 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 123 223 6.7E-31 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 BD65_204 9090530b9879930533cb06da080c9e32 227 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.8E-33 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 BD65_204 9090530b9879930533cb06da080c9e32 227 Gene3D G3DSA:3.30.750.120 1 115 1.7E-41 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily BD65_2900 1b0542e120eb5d5deb50d144dc9977ff 228 Gene3D G3DSA:3.40.50.300 4 228 3.5E-63 T 14-10-2018 BD65_2900 1b0542e120eb5d5deb50d144dc9977ff 228 SMART SM00382 35 223 2.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2900 1b0542e120eb5d5deb50d144dc9977ff 228 Pfam PF00005 ABC transporter 27 174 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2900 1b0542e120eb5d5deb50d144dc9977ff 228 SUPERFAMILY SSF52540 6 227 1.89E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2900 1b0542e120eb5d5deb50d144dc9977ff 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1009 679a50c27f3e426997cd0667d7f0c0f2 847 SUPERFAMILY SSF141729 65 177 2.22E-31 T 14-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 BD65_1009 679a50c27f3e426997cd0667d7f0c0f2 847 Pfam PF13954 PapC N-terminal domain 40 186 2.5E-45 T 14-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 BD65_1009 679a50c27f3e426997cd0667d7f0c0f2 847 Gene3D G3DSA:3.10.20.410 57 174 3.2E-35 T 14-10-2018 BD65_1009 679a50c27f3e426997cd0667d7f0c0f2 847 Pfam PF13953 PapC C-terminal domain 760 828 2.5E-27 T 14-10-2018 IPR025949 PapC-like, C-terminal domain BD65_1009 679a50c27f3e426997cd0667d7f0c0f2 847 Pfam PF00577 Outer membrane usher protein 202 751 8.4E-196 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BD65_1009 679a50c27f3e426997cd0667d7f0c0f2 847 Gene3D G3DSA:2.60.40.3110 271 360 2.0E-36 T 14-10-2018 BD65_1009 679a50c27f3e426997cd0667d7f0c0f2 847 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 313 323 - T 14-10-2018 IPR018030 Fimbrial membrane usher, conserved site BD65_1009 679a50c27f3e426997cd0667d7f0c0f2 847 Gene3D G3DSA:2.60.40.2070 757 847 2.4E-29 T 14-10-2018 BD65_1009 679a50c27f3e426997cd0667d7f0c0f2 847 Gene3D G3DSA:2.60.40.2610 667 756 3.5E-33 T 14-10-2018 BD65_268 b727e01792cf1a07bc5d642743430a94 258 SUPERFAMILY SSF49354 45 174 1.18E-34 T 14-10-2018 IPR008962 PapD-like superfamily BD65_268 b727e01792cf1a07bc5d642743430a94 258 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 195 251 1.1E-14 T 14-10-2018 IPR016148 Pili assembly chaperone, C-terminal BD65_268 b727e01792cf1a07bc5d642743430a94 258 SUPERFAMILY SSF49584 177 254 8.5E-22 T 14-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BD65_268 b727e01792cf1a07bc5d642743430a94 258 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 45 174 2.3E-32 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BD65_268 b727e01792cf1a07bc5d642743430a94 258 PRINTS PR00969 Pili chaperone signature 45 54 1.2E-32 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_268 b727e01792cf1a07bc5d642743430a94 258 PRINTS PR00969 Pili chaperone signature 117 134 1.2E-32 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_268 b727e01792cf1a07bc5d642743430a94 258 PRINTS PR00969 Pili chaperone signature 156 171 1.2E-32 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_268 b727e01792cf1a07bc5d642743430a94 258 PRINTS PR00969 Pili chaperone signature 190 205 1.2E-32 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_268 b727e01792cf1a07bc5d642743430a94 258 PRINTS PR00969 Pili chaperone signature 89 110 1.2E-32 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_268 b727e01792cf1a07bc5d642743430a94 258 Gene3D G3DSA:2.60.40.10 45 172 9.2E-42 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_268 b727e01792cf1a07bc5d642743430a94 258 Gene3D G3DSA:2.60.40.10 175 257 1.7E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_3243 02f025141d7bca7663b0e2c42e00a0f7 229 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.137 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BD65_3243 02f025141d7bca7663b0e2c42e00a0f7 229 Pfam PF02224 Cytidylate kinase 8 221 4.7E-82 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BD65_3243 02f025141d7bca7663b0e2c42e00a0f7 229 Gene3D G3DSA:3.40.50.300 1 229 1.8E-86 T 14-10-2018 BD65_3243 02f025141d7bca7663b0e2c42e00a0f7 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.9E-92 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BD65_3243 02f025141d7bca7663b0e2c42e00a0f7 229 SUPERFAMILY SSF52540 6 224 1.25E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2983 388759eca1726469134d9e114630a2a4 474 Pfam PF01938 TRAM domain 378 440 2.3E-16 T 14-10-2018 IPR002792 TRAM domain BD65_2983 388759eca1726469134d9e114630a2a4 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.4E-151 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BD65_2983 388759eca1726469134d9e114630a2a4 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BD65_2983 388759eca1726469134d9e114630a2a4 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 8.6E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BD65_2983 388759eca1726469134d9e114630a2a4 474 Pfam PF04055 Radical SAM superfamily 151 324 2.2E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_2983 388759eca1726469134d9e114630a2a4 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.952 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 BD65_2983 388759eca1726469134d9e114630a2a4 474 SUPERFAMILY SSF102114 125 373 3.14E-63 T 14-10-2018 BD65_2983 388759eca1726469134d9e114630a2a4 474 Gene3D G3DSA:3.40.50.12160 3 135 9.1E-32 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BD65_2983 388759eca1726469134d9e114630a2a4 474 SMART SM00729 147 367 1.3E-61 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BD65_2983 388759eca1726469134d9e114630a2a4 474 Gene3D G3DSA:3.80.30.20 145 378 1.9E-82 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BD65_2983 388759eca1726469134d9e114630a2a4 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 3.9E-202 T 14-10-2018 BD65_2019 fe94000d3dccbf2f3084290a1290580a 361 Gene3D G3DSA:3.40.50.300 8 331 1.0E-78 T 14-10-2018 BD65_2019 fe94000d3dccbf2f3084290a1290580a 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 3.7E-131 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BD65_2019 fe94000d3dccbf2f3084290a1290580a 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 99.443 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BD65_2019 fe94000d3dccbf2f3084290a1290580a 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BD65_2019 fe94000d3dccbf2f3084290a1290580a 361 Gene3D G3DSA:1.20.1050.90 120 297 1.0E-78 T 14-10-2018 BD65_2019 fe94000d3dccbf2f3084290a1290580a 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BD65_2019 fe94000d3dccbf2f3084290a1290580a 361 SUPERFAMILY SSF52540 1 340 1.23E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2019 fe94000d3dccbf2f3084290a1290580a 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 342 4.5E-38 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BD65_293 b64c9fda06c736f0fc319f2c6cee7f1c 83 Pfam PF10692 Protein of unknown function (DUF2498) 4 81 3.0E-43 T 14-10-2018 IPR019633 Protein of unknown function DUF2498 BD65_293 b64c9fda06c736f0fc319f2c6cee7f1c 83 Gene3D G3DSA:1.10.1900.30 9 77 7.4E-38 T 14-10-2018 IPR038191 YciN superfamily BD65_1006 5f8b877832aa33a5526b3a6eb55e0efc 450 SUPERFAMILY SSF53067 1 204 6.8E-26 T 14-10-2018 BD65_1006 5f8b877832aa33a5526b3a6eb55e0efc 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BD65_1006 5f8b877832aa33a5526b3a6eb55e0efc 450 Gene3D G3DSA:3.30.420.40 379 433 2.1E-12 T 14-10-2018 BD65_1006 5f8b877832aa33a5526b3a6eb55e0efc 450 Pfam PF00012 Hsp70 protein 331 423 3.3E-6 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1006 5f8b877832aa33a5526b3a6eb55e0efc 450 Pfam PF00012 Hsp70 protein 3 229 1.4E-13 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_1006 5f8b877832aa33a5526b3a6eb55e0efc 450 SUPERFAMILY SSF53067 208 447 6.48E-32 T 14-10-2018 BD65_1006 5f8b877832aa33a5526b3a6eb55e0efc 450 Gene3D G3DSA:3.90.640.10 330 378 2.1E-12 T 14-10-2018 BD65_762 ff378b1e6b789177a9b14d0ae1bb2816 378 SUPERFAMILY SSF53807 34 369 4.91E-54 T 14-10-2018 BD65_762 ff378b1e6b789177a9b14d0ae1bb2816 378 Gene3D G3DSA:3.40.50.1980 32 376 1.1E-106 T 14-10-2018 BD65_762 ff378b1e6b789177a9b14d0ae1bb2816 378 Pfam PF01497 Periplasmic binding protein 87 321 1.0E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain BD65_696 16a027ecdcdad36ff0abab718afe0b82 427 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 409 2.0E-93 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BD65_696 16a027ecdcdad36ff0abab718afe0b82 427 Pfam PF07559 Flagellar basal body protein FlaE 173 308 2.6E-20 T 14-10-2018 IPR011491 Flagellar hook protein FlgE BD65_696 16a027ecdcdad36ff0abab718afe0b82 427 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BD65_696 16a027ecdcdad36ff0abab718afe0b82 427 Pfam PF00460 Flagella basal body rod protein 4 33 3.2E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BD65_696 16a027ecdcdad36ff0abab718afe0b82 427 Gene3D G3DSA:2.60.98.20 146 309 1.7E-36 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily BD65_696 16a027ecdcdad36ff0abab718afe0b82 427 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 349 426 4.7E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BD65_696 16a027ecdcdad36ff0abab718afe0b82 427 SUPERFAMILY SSF117143 73 388 4.71E-79 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BD65_2284 bdc87193006586235335637a1621827c 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.823 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 BD65_2284 bdc87193006586235335637a1621827c 181 SUPERFAMILY SSF53098 4 180 4.24E-48 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2284 bdc87193006586235335637a1621827c 181 SMART SM00479 7 180 1.4E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BD65_2284 bdc87193006586235335637a1621827c 181 Gene3D G3DSA:3.30.420.10 1 181 7.6E-71 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2284 bdc87193006586235335637a1621827c 181 Pfam PF00929 Exonuclease 9 170 4.2E-34 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BD65_567 e22e57e064847ab4cd25024b08ec887b 181 Gene3D G3DSA:3.40.50.1950 1 180 2.8E-37 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BD65_567 e22e57e064847ab4cd25024b08ec887b 181 Pfam PF02441 Flavoprotein 4 175 5.6E-29 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BD65_567 e22e57e064847ab4cd25024b08ec887b 181 SUPERFAMILY SSF52507 2 159 3.66E-36 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BD65_1424 53f774fa38c6f387ffc13fc17b86339f 729 SMART SM00490 351 433 2.1E-6 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1424 53f774fa38c6f387ffc13fc17b86339f 729 SMART SM00487 97 284 0.0012 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_1424 53f774fa38c6f387ffc13fc17b86339f 729 Gene3D G3DSA:3.40.50.300 266 455 1.2E-17 T 14-10-2018 BD65_1424 53f774fa38c6f387ffc13fc17b86339f 729 Gene3D G3DSA:3.40.50.300 85 219 8.4E-13 T 14-10-2018 BD65_1424 53f774fa38c6f387ffc13fc17b86339f 729 Pfam PF00271 Helicase conserved C-terminal domain 364 433 6.0E-6 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1424 53f774fa38c6f387ffc13fc17b86339f 729 SUPERFAMILY SSF52540 30 210 6.4E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1424 53f774fa38c6f387ffc13fc17b86339f 729 SUPERFAMILY SSF52540 290 447 1.61E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_705 e0f5022470fcd06a37d405a7ece98baa 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 1.7E-133 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 BD65_705 e0f5022470fcd06a37d405a7ece98baa 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.9E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_705 e0f5022470fcd06a37d405a7ece98baa 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.9E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_705 e0f5022470fcd06a37d405a7ece98baa 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.9E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_705 e0f5022470fcd06a37d405a7ece98baa 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.9E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_705 e0f5022470fcd06a37d405a7ece98baa 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.9E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_705 e0f5022470fcd06a37d405a7ece98baa 383 SUPERFAMILY SSF160544 251 355 8.37E-42 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BD65_705 e0f5022470fcd06a37d405a7ece98baa 383 Gene3D G3DSA:3.40.1690.10 217 359 9.4E-61 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BD65_705 e0f5022470fcd06a37d405a7ece98baa 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 3.0E-127 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BD65_1041 74081489d20ba08485bb2d9081104617 431 Hamap MF_00504 Peptidase B [pepB]. 4 428 67.533 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 BD65_1041 74081489d20ba08485bb2d9081104617 431 Pfam PF12404 Peptidase 6 82 7.2E-35 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 BD65_1041 74081489d20ba08485bb2d9081104617 431 PIRSF PIRSF036388 2 431 2.8E-235 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 BD65_1041 74081489d20ba08485bb2d9081104617 431 SUPERFAMILY SSF53187 108 428 2.7E-102 T 14-10-2018 BD65_1041 74081489d20ba08485bb2d9081104617 431 Gene3D G3DSA:3.40.630.10 92 431 3.4E-105 T 14-10-2018 BD65_1041 74081489d20ba08485bb2d9081104617 431 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 8.8E-103 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BD65_1041 74081489d20ba08485bb2d9081104617 431 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BD65_1041 74081489d20ba08485bb2d9081104617 431 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 6.6E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BD65_1041 74081489d20ba08485bb2d9081104617 431 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 6.6E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BD65_1041 74081489d20ba08485bb2d9081104617 431 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 6.6E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BD65_1041 74081489d20ba08485bb2d9081104617 431 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 6.6E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BD65_1041 74081489d20ba08485bb2d9081104617 431 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 6.6E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BD65_568 bb984e4dd0bdcac8a273b10e1f1939c5 154 Gene3D G3DSA:1.10.490.10 4 128 6.4E-26 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BD65_568 bb984e4dd0bdcac8a273b10e1f1939c5 154 Pfam PF01152 Bacterial-like globin 7 103 9.5E-11 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 BD65_568 bb984e4dd0bdcac8a273b10e1f1939c5 154 SUPERFAMILY SSF46458 7 119 9.64E-22 T 14-10-2018 IPR009050 Globin-like superfamily BD65_2556 ba613cd55545ff62f344278c76460f20 355 SUPERFAMILY SSF53756 6 353 1.45E-129 T 14-10-2018 BD65_2556 ba613cd55545ff62f344278c76460f20 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 347 4.2E-115 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2556 ba613cd55545ff62f344278c76460f20 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 1.3E-47 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2556 ba613cd55545ff62f344278c76460f20 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.346 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2556 ba613cd55545ff62f344278c76460f20 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 343 6.5E-37 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 BD65_2556 ba613cd55545ff62f344278c76460f20 355 Gene3D G3DSA:3.40.50.2000 162 319 6.9E-124 T 14-10-2018 BD65_2556 ba613cd55545ff62f344278c76460f20 355 Gene3D G3DSA:3.40.50.2000 9 161 6.9E-124 T 14-10-2018 BD65_292 d773d32bae8d085eb7b9a051bd5fa1d5 348 Gene3D G3DSA:3.40.1750.20 201 265 4.9E-42 T 14-10-2018 BD65_292 d773d32bae8d085eb7b9a051bd5fa1d5 348 SUPERFAMILY SSF52096 95 298 4.98E-31 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_292 d773d32bae8d085eb7b9a051bd5fa1d5 348 Pfam PF01343 Peptidase family S49 161 306 1.7E-45 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BD65_292 d773d32bae8d085eb7b9a051bd5fa1d5 348 Gene3D G3DSA:3.90.226.10 104 300 4.9E-42 T 14-10-2018 BD65_292 d773d32bae8d085eb7b9a051bd5fa1d5 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 6.6E-58 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.8E-24 T 14-10-2018 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.8E-24 T 14-10-2018 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.8E-24 T 14-10-2018 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.8E-24 T 14-10-2018 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.8E-24 T 14-10-2018 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 SUPERFAMILY SSF81665 35 305 1.29E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 SUPERFAMILY SSF81653 115 207 8.5E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 SUPERFAMILY SSF56784 299 565 1.19E-37 T 14-10-2018 IPR036412 HAD-like superfamily BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 Gene3D G3DSA:2.70.150.20 107 212 7.6E-26 T 14-10-2018 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 7.8E-35 T 14-10-2018 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 347 2.9E-34 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 379 610 3.0E-48 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 683 0.0 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 Pfam PF00122 E1-E2 ATPase 115 288 4.5E-32 T 14-10-2018 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 Gene3D G3DSA:3.40.1110.10 322 457 5.4E-56 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BD65_3013 e5b3b1edee75a5e1de96e55f722c5028 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 41.162 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 BD65_1924 bcbe112a4f55b3c1471f0a649e1666be 152 SUPERFAMILY SSF51283 1 151 1.44E-55 T 14-10-2018 IPR036157 dUTPase-like superfamily BD65_1924 bcbe112a4f55b3c1471f0a649e1666be 152 Pfam PF00692 dUTPase 17 150 2.3E-42 T 14-10-2018 IPR029054 dUTPase-like BD65_1924 bcbe112a4f55b3c1471f0a649e1666be 152 Gene3D G3DSA:2.70.40.10 1 151 8.1E-53 T 14-10-2018 IPR036157 dUTPase-like superfamily BD65_1924 bcbe112a4f55b3c1471f0a649e1666be 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 12 151 7.0E-49 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 BD65_1924 bcbe112a4f55b3c1471f0a649e1666be 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.501 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 BD65_2773 959d0f6a6ddf874fb83d5c8db5e14339 417 Gene3D G3DSA:3.40.605.10 9 411 3.2E-159 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BD65_2773 959d0f6a6ddf874fb83d5c8db5e14339 417 Pfam PF00171 Aldehyde dehydrogenase family 3 280 1.8E-13 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BD65_2773 959d0f6a6ddf874fb83d5c8db5e14339 417 PIRSF PIRSF000151 1 417 9.7E-171 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BD65_2773 959d0f6a6ddf874fb83d5c8db5e14339 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 5.1E-184 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BD65_2773 959d0f6a6ddf874fb83d5c8db5e14339 417 SUPERFAMILY SSF53720 3 412 8.12E-115 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BD65_2773 959d0f6a6ddf874fb83d5c8db5e14339 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BD65_2773 959d0f6a6ddf874fb83d5c8db5e14339 417 Gene3D G3DSA:3.40.309.10 222 374 3.2E-159 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BD65_2773 959d0f6a6ddf874fb83d5c8db5e14339 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 40.808 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 SMART SM00841 131 186 3.5E-32 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.4E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 PIRSF PIRSF005901 2 188 1.5E-65 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 Gene3D G3DSA:2.40.50.140 66 129 2.6E-29 T 14-10-2018 BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 Gene3D G3DSA:2.30.30.30 1 65 2.3E-28 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 3.8E-76 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 SMART SM01185 69 123 5.0E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 SUPERFAMILY SSF50104 4 64 1.2E-18 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 SUPERFAMILY SSF50249 130 187 2.74E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 2.6E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 1.3E-24 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 Gene3D G3DSA:2.40.50.140 130 188 1.4E-27 T 14-10-2018 BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 SUPERFAMILY SSF50249 69 128 3.17E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2267 ec0ebebf741cda8d4b5c4321172facef 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.777 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BD65_1923 c4001a613b3f3678ec41d104be105551 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 369 1.8E-74 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BD65_1923 c4001a613b3f3678ec41d104be105551 404 Pfam PF02441 Flavoprotein 7 176 1.6E-42 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BD65_1923 c4001a613b3f3678ec41d104be105551 404 Gene3D G3DSA:3.40.50.10300 187 404 2.1E-87 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BD65_1923 c4001a613b3f3678ec41d104be105551 404 SUPERFAMILY SSF52507 3 180 1.05E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BD65_1923 c4001a613b3f3678ec41d104be105551 404 SUPERFAMILY SSF102645 185 400 7.85E-81 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BD65_1923 c4001a613b3f3678ec41d104be105551 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 395 1.3E-159 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 BD65_1923 c4001a613b3f3678ec41d104be105551 404 Gene3D G3DSA:3.40.50.1950 1 186 1.7E-53 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BD65_2796 037d5a9686f07afc150f5c61a97d875b 226 SUPERFAMILY SSF51735 6 226 4.63E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2796 037d5a9686f07afc150f5c61a97d875b 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.1E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2796 037d5a9686f07afc150f5c61a97d875b 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.1E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2796 037d5a9686f07afc150f5c61a97d875b 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2796 037d5a9686f07afc150f5c61a97d875b 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.1E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2796 037d5a9686f07afc150f5c61a97d875b 226 Pfam PF00106 short chain dehydrogenase 6 187 2.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2796 037d5a9686f07afc150f5c61a97d875b 226 Gene3D G3DSA:3.40.50.720 1 226 2.3E-55 T 14-10-2018 BD65_1081 2d7b30bf6d72f53f8209b0722c42b564 284 Gene3D G3DSA:3.40.50.300 1 166 7.1E-44 T 14-10-2018 BD65_1081 2d7b30bf6d72f53f8209b0722c42b564 284 TIGRFAM TIGR00436 era: GTP-binding protein Era 1 262 4.2E-110 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1081 2d7b30bf6d72f53f8209b0722c42b564 284 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 152 9.1E-36 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_1081 2d7b30bf6d72f53f8209b0722c42b564 284 Pfam PF01926 50S ribosome-binding GTPase 1 107 2.6E-16 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_1081 2d7b30bf6d72f53f8209b0722c42b564 284 Pfam PF07650 KH domain 191 267 2.5E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_1081 2d7b30bf6d72f53f8209b0722c42b564 284 SUPERFAMILY SSF52540 1 187 2.59E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1081 2d7b30bf6d72f53f8209b0722c42b564 284 SUPERFAMILY SSF54814 164 279 1.11E-42 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BD65_1081 2d7b30bf6d72f53f8209b0722c42b564 284 Gene3D G3DSA:3.30.300.20 168 284 1.4E-43 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BD65_1081 2d7b30bf6d72f53f8209b0722c42b564 284 Hamap MF_00367 GTPase Era [era]. 1 279 30.996 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 Pfam PF00206 Lyase 14 312 3.6E-78 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 7.3E-17 T 14-10-2018 IPR000362 Fumarate lyase family BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 7.3E-17 T 14-10-2018 IPR000362 Fumarate lyase family BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 7.3E-17 T 14-10-2018 IPR000362 Fumarate lyase family BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 7.3E-17 T 14-10-2018 IPR000362 Fumarate lyase family BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 SUPERFAMILY SSF48557 10 454 1.37E-104 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 2.4E-152 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 Gene3D G3DSA:1.10.275.10 1 117 7.9E-53 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.3E-52 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 Gene3D G3DSA:1.10.40.30 382 445 4.6E-158 T 14-10-2018 BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BD65_85 c8d15c0684340ad4fdd4b43f4941f3bb 456 Gene3D G3DSA:1.20.200.10 118 446 4.6E-158 T 14-10-2018 BD65_412 d0eb5a73ca21551004da83111c8f6c74 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 291 3.3E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_412 d0eb5a73ca21551004da83111c8f6c74 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 2.2E-8 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BD65_412 d0eb5a73ca21551004da83111c8f6c74 296 Gene3D G3DSA:1.10.3720.10 85 292 2.9E-18 T 14-10-2018 IPR035906 MetI-like superfamily BD65_412 d0eb5a73ca21551004da83111c8f6c74 296 SUPERFAMILY SSF161098 90 277 1.02E-22 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Pfam PF02310 B12 binding domain 747 839 1.7E-18 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 SUPERFAMILY SSF47644 652 738 1.31E-28 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Pfam PF02607 B12 binding domain 659 732 1.2E-23 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 SUPERFAMILY SSF51717 356 630 5.63E-88 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 SUPERFAMILY SSF82282 7 399 3.14E-115 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 PIRSF PIRSF000381 1 1194 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Gene3D G3DSA:3.40.50.280 743 894 6.0E-57 T 14-10-2018 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 SUPERFAMILY SSF52242 742 893 2.22E-46 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Gene3D G3DSA:3.20.20.330 2 338 1.8E-122 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Gene3D G3DSA:1.10.1240.10 649 736 1.2E-39 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 SMART SM01018 656 739 4.2E-44 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 937 1207 3.9E-124 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Gene3D G3DSA:3.10.196.10 907 1222 6.7E-149 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Gene3D G3DSA:1.10.288.10 935 1091 6.7E-149 T 14-10-2018 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1191 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Pfam PF00809 Pterin binding enzyme 360 598 1.9E-62 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Pfam PF02574 Homocysteine S-methyltransferase 17 325 6.9E-78 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 Gene3D G3DSA:3.20.20.20 340 642 2.4E-129 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_1620 a6f387ce762f6a5f06b64336526e410d 1226 SUPERFAMILY SSF56507 902 1225 2.49E-133 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_2015 f4f70a0baa9103219a81402a6c8ec9df 108 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.977 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BD65_2015 f4f70a0baa9103219a81402a6c8ec9df 108 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 103 1.6E-34 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BD65_2015 f4f70a0baa9103219a81402a6c8ec9df 108 Pfam PF00825 Ribonuclease P 1 100 6.5E-30 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BD65_2015 f4f70a0baa9103219a81402a6c8ec9df 108 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 6 87 9.0E-42 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BD65_2015 f4f70a0baa9103219a81402a6c8ec9df 108 SUPERFAMILY SSF54211 1 103 1.21E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2015 f4f70a0baa9103219a81402a6c8ec9df 108 Gene3D G3DSA:3.30.230.10 1 108 1.2E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_2015 f4f70a0baa9103219a81402a6c8ec9df 108 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 BD65_491 10401a8fca932d63eb5396653db86874 795 Gene3D G3DSA:3.30.56.10 7 180 9.7E-76 T 14-10-2018 BD65_491 10401a8fca932d63eb5396653db86874 795 SMART SM00896 701 794 2.5E-41 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 BD65_491 10401a8fca932d63eb5396653db86874 795 SMART SM00874 403 471 4.9E-33 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BD65_491 10401a8fca932d63eb5396653db86874 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 8.9E-292 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BD65_491 10401a8fca932d63eb5396653db86874 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 5.7E-22 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BD65_491 10401a8fca932d63eb5396653db86874 795 Pfam PF03483 B3/4 domain 212 385 1.4E-70 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BD65_491 10401a8fca932d63eb5396653db86874 795 Gene3D G3DSA:3.50.40.10 197 395 9.7E-82 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 BD65_491 10401a8fca932d63eb5396653db86874 795 Gene3D G3DSA:3.30.56.10 401 475 1.5E-29 T 14-10-2018 BD65_491 10401a8fca932d63eb5396653db86874 795 SMART SM00873 212 385 4.4E-96 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BD65_491 10401a8fca932d63eb5396653db86874 795 Gene3D G3DSA:2.40.50.140 39 154 9.7E-76 T 14-10-2018 BD65_491 10401a8fca932d63eb5396653db86874 795 Gene3D G3DSA:3.30.930.10 485 693 2.5E-64 T 14-10-2018 BD65_491 10401a8fca932d63eb5396653db86874 795 SUPERFAMILY SSF46955 403 475 9.16E-22 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BD65_491 10401a8fca932d63eb5396653db86874 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.596 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BD65_491 10401a8fca932d63eb5396653db86874 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.8E-27 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 BD65_491 10401a8fca932d63eb5396653db86874 795 SUPERFAMILY SSF50249 35 196 5.88E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_491 10401a8fca932d63eb5396653db86874 795 SUPERFAMILY SSF56037 195 395 6.02E-76 T 14-10-2018 BD65_491 10401a8fca932d63eb5396653db86874 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.8E-27 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BD65_491 10401a8fca932d63eb5396653db86874 795 SUPERFAMILY SSF54991 696 794 7.72E-29 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 BD65_491 10401a8fca932d63eb5396653db86874 795 Gene3D G3DSA:3.30.70.380 702 795 9.0E-31 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 BD65_491 10401a8fca932d63eb5396653db86874 795 SUPERFAMILY SSF55681 467 689 1.09E-54 T 14-10-2018 BD65_2039 b1c8c51ca06d529e2419f6e96c8eec58 254 Gene3D G3DSA:2.60.40.10 40 158 3.1E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2039 b1c8c51ca06d529e2419f6e96c8eec58 254 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 41 158 3.0E-18 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BD65_2039 b1c8c51ca06d529e2419f6e96c8eec58 254 SUPERFAMILY SSF49354 28 158 3.92E-24 T 14-10-2018 IPR008962 PapD-like superfamily BD65_3145 c675713b937cc2b8926ca2ad4cd8ba90 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 2.2E-48 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BD65_841 ef7984d84e53fd4d1a753b6519abbada 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_841 ef7984d84e53fd4d1a753b6519abbada 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_841 ef7984d84e53fd4d1a753b6519abbada 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.937 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_841 ef7984d84e53fd4d1a753b6519abbada 325 Pfam PF00146 NADH dehydrogenase 17 316 2.6E-120 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_2862 2685853b9a47d7c430813f3077aa01ae 504 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 1.6E-146 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane BD65_1270 32bf0ccea2b6de61ac3178d658c73d54 330 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 188 253 2.3E-24 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site BD65_1270 32bf0ccea2b6de61ac3178d658c73d54 330 PIRSF PIRSF006487 20 286 3.2E-12 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BD65_1270 32bf0ccea2b6de61ac3178d658c73d54 330 Gene3D G3DSA:3.30.70.1400 28 114 3.1E-58 T 14-10-2018 BD65_1270 32bf0ccea2b6de61ac3178d658c73d54 330 SUPERFAMILY SSF101790 245 327 1.11E-25 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BD65_1270 32bf0ccea2b6de61ac3178d658c73d54 330 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 200 3.2E-9 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain BD65_1270 32bf0ccea2b6de61ac3178d658c73d54 330 Gene3D G3DSA:2.40.30.160 198 319 2.3E-42 T 14-10-2018 BD65_1270 32bf0ccea2b6de61ac3178d658c73d54 330 SUPERFAMILY SSF103025 19 243 8.48E-62 T 14-10-2018 BD65_1270 32bf0ccea2b6de61ac3178d658c73d54 330 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 323 48.007 T 14-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 BD65_1270 32bf0ccea2b6de61ac3178d658c73d54 330 Gene3D G3DSA:3.30.70.1630 25 195 3.1E-58 T 14-10-2018 BD65_443 14b0d0a2ec242cc81adc5a2261607abc 303 SUPERFAMILY SSF46785 6 88 4.09E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_443 14b0d0a2ec242cc81adc5a2261607abc 303 SUPERFAMILY SSF53850 89 291 1.03E-28 T 14-10-2018 BD65_443 14b0d0a2ec242cc81adc5a2261607abc 303 Gene3D G3DSA:3.40.190.10 168 264 9.9E-14 T 14-10-2018 BD65_443 14b0d0a2ec242cc81adc5a2261607abc 303 Gene3D G3DSA:3.40.190.10 108 286 9.9E-14 T 14-10-2018 BD65_443 14b0d0a2ec242cc81adc5a2261607abc 303 Pfam PF03466 LysR substrate binding domain 88 290 1.6E-23 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_443 14b0d0a2ec242cc81adc5a2261607abc 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 6.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_443 14b0d0a2ec242cc81adc5a2261607abc 303 Gene3D G3DSA:1.10.10.10 3 89 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_3231 1a8dd9795ae350b21f0237beb43d3ea9 203 Gene3D G3DSA:2.50.20.10 19 202 2.9E-53 T 14-10-2018 BD65_3231 1a8dd9795ae350b21f0237beb43d3ea9 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 10 201 31.975 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 BD65_3231 1a8dd9795ae350b21f0237beb43d3ea9 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 6.4E-99 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 BD65_3231 1a8dd9795ae350b21f0237beb43d3ea9 203 SUPERFAMILY SSF89392 23 202 2.63E-55 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BD65_3231 1a8dd9795ae350b21f0237beb43d3ea9 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 32 191 2.9E-58 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BD65_3264 cda590a13281d514f4618d86cc389810 396 Gene3D G3DSA:3.90.1150.10 11 391 9.4E-164 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_3264 cda590a13281d514f4618d86cc389810 396 SUPERFAMILY SSF53383 1 396 9.15E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_3264 cda590a13281d514f4618d86cc389810 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.5E-39 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BD65_3264 cda590a13281d514f4618d86cc389810 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.5E-39 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BD65_3264 cda590a13281d514f4618d86cc389810 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.5E-39 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BD65_3264 cda590a13281d514f4618d86cc389810 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.5E-39 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BD65_3264 cda590a13281d514f4618d86cc389810 396 Gene3D G3DSA:3.40.640.10 45 315 9.4E-164 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_3264 cda590a13281d514f4618d86cc389810 396 Pfam PF00155 Aminotransferase class I and II 27 392 1.5E-91 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BD65_3264 cda590a13281d514f4618d86cc389810 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 2.5E-49 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 PIRSF PIRSF001535 1 572 5.2E-277 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 Gene3D G3DSA:3.40.50.800 4 554 1.1E-242 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.066 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 Gene3D G3DSA:3.30.930.10 11 465 1.1E-242 T 14-10-2018 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 SUPERFAMILY SSF52954 462 571 2.42E-33 T 14-10-2018 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 Gene3D G3DSA:3.90.960.10 240 389 1.1E-242 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 2.3E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 3.3E-272 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 SUPERFAMILY SSF55826 218 390 9.55E-32 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 Pfam PF03129 Anticodon binding domain 475 568 4.3E-22 T 14-10-2018 IPR004154 Anticodon-binding BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.9E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.9E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.9E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.9E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BD65_1167 17e50fc7389e94899d1d17f5a17bcce1 572 SUPERFAMILY SSF55681 10 478 3.73E-107 T 14-10-2018 BD65_3191 3daf72620ac99ee266a8580e40ded9d6 201 SMART SM00014 59 168 1.1E-21 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BD65_3191 3daf72620ac99ee266a8580e40ded9d6 201 SUPERFAMILY SSF48317 1 180 9.42E-33 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BD65_3191 3daf72620ac99ee266a8580e40ded9d6 201 Gene3D G3DSA:1.20.144.10 93 184 1.5E-15 T 14-10-2018 BD65_3191 3daf72620ac99ee266a8580e40ded9d6 201 Pfam PF01569 PAP2 superfamily 64 167 1.4E-10 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BD65_478 305db83af62349ee87881baebe97d12d 300 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 64.008 T 14-10-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 BD65_478 305db83af62349ee87881baebe97d12d 300 Pfam PF01522 Polysaccharide deacetylase 15 160 1.7E-11 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BD65_478 305db83af62349ee87881baebe97d12d 300 SUPERFAMILY SSF88713 2 280 1.56E-24 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BD65_353 6528d0ed680e57e19b14ec8ba005c6de 283 PIRSF PIRSF030125 8 283 7.1E-92 T 14-10-2018 IPR016946 Uncharacterised conserved protein UCP030125 BD65_144 e95fa4ccdfdc55501d05cf07fa079c84 285 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 272 32.41 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BD65_144 e95fa4ccdfdc55501d05cf07fa079c84 285 Gene3D G3DSA:3.30.70.890 162 279 1.7E-26 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BD65_144 e95fa4ccdfdc55501d05cf07fa079c84 285 Gene3D G3DSA:3.30.230.10 2 160 1.4E-55 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_144 e95fa4ccdfdc55501d05cf07fa079c84 285 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 276 8.2E-107 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BD65_144 e95fa4ccdfdc55501d05cf07fa079c84 285 PIRSF PIRSF010376 1 280 2.0E-84 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BD65_144 e95fa4ccdfdc55501d05cf07fa079c84 285 Pfam PF08544 GHMP kinases C terminal 213 257 7.5E-5 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain BD65_144 e95fa4ccdfdc55501d05cf07fa079c84 285 SUPERFAMILY SSF55060 164 278 8.63E-36 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BD65_144 e95fa4ccdfdc55501d05cf07fa079c84 285 SUPERFAMILY SSF54211 2 159 2.58E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_144 e95fa4ccdfdc55501d05cf07fa079c84 285 Pfam PF00288 GHMP kinases N terminal domain 88 145 1.6E-10 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BD65_1427 f26d56c44ecbf33b36a9a5244ee26c9f 100 SUPERFAMILY SSF46689 1 93 5.91E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1427 f26d56c44ecbf33b36a9a5244ee26c9f 100 Gene3D G3DSA:1.10.10.60 7 90 4.4E-7 T 14-10-2018 BD65_1427 f26d56c44ecbf33b36a9a5244ee26c9f 100 Pfam PF01527 Transposase 2 74 2.1E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_492 a5fa4c953ebf70e1e121634478c6b1e5 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 5.2E-107 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 BD65_492 a5fa4c953ebf70e1e121634478c6b1e5 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 7.2E-25 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BD65_492 a5fa4c953ebf70e1e121634478c6b1e5 327 SUPERFAMILY SSF46589 14 99 6.28E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BD65_492 a5fa4c953ebf70e1e121634478c6b1e5 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.734 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 BD65_492 a5fa4c953ebf70e1e121634478c6b1e5 327 SUPERFAMILY SSF55681 92 327 1.64E-81 T 14-10-2018 BD65_492 a5fa4c953ebf70e1e121634478c6b1e5 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.5E-116 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BD65_492 a5fa4c953ebf70e1e121634478c6b1e5 327 Gene3D G3DSA:3.30.930.10 8 327 2.1E-124 T 14-10-2018 BD65_2706 423eae8f2cf64e872843e38e818bd4eb 547 Pfam PF05683 Fumarase C-terminus 332 536 1.2E-92 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BD65_2706 423eae8f2cf64e872843e38e818bd4eb 547 Gene3D G3DSA:3.20.130.10 347 536 2.4E-57 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 BD65_2706 423eae8f2cf64e872843e38e818bd4eb 547 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 76 323 9.6E-32 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 BD65_2706 423eae8f2cf64e872843e38e818bd4eb 547 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BD65_2706 423eae8f2cf64e872843e38e818bd4eb 547 SUPERFAMILY SSF117457 361 536 4.45E-61 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 BD65_2706 423eae8f2cf64e872843e38e818bd4eb 547 Pfam PF05681 Fumarate hydratase (Fumerase) 51 325 1.3E-84 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 BD65_2706 423eae8f2cf64e872843e38e818bd4eb 547 PIRSF PIRSF001394 30 547 7.5E-228 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 BD65_2706 423eae8f2cf64e872843e38e818bd4eb 547 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 536 4.5E-60 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BD65_2925 028c2a8027a9a1090e018a2f3ce6e8b8 169 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 35 142 2.1E-7 T 14-10-2018 IPR020353 mRNA interferase toxin YafO BD65_2514 e717503bbc457c5166df34efceae737b 204 PIRSF PIRSF006324 1 204 5.4E-58 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BD65_2514 e717503bbc457c5166df34efceae737b 204 Pfam PF01810 LysE type translocator 15 203 3.4E-38 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BD65_542 50bafea72c0906ae39c8a7d814643f0f 128 Pfam PF04234 CopC domain 31 127 1.1E-23 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 BD65_542 50bafea72c0906ae39c8a7d814643f0f 128 SUPERFAMILY SSF81296 30 128 3.01E-27 T 14-10-2018 IPR014756 Immunoglobulin E-set BD65_542 50bafea72c0906ae39c8a7d814643f0f 128 Gene3D G3DSA:2.60.40.1220 30 128 2.1E-26 T 14-10-2018 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.2E-67 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 4.6E-39 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 Gene3D G3DSA:3.40.50.720 6 259 5.0E-105 T 14-10-2018 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 SUPERFAMILY SSF53223 1 122 4.89E-40 T 14-10-2018 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 SUPERFAMILY SSF51735 123 286 4.21E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 Gene3D G3DSA:3.40.50.10860 8 276 5.0E-105 T 14-10-2018 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.7E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.7E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.7E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.7E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.7E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.7E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.7E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_2919 6a0b8bd1f2c1910dfad585273b0b3c9e 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.502 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BD65_1284 2757eed508dc7762607f3533a263e50f 413 Gene3D G3DSA:3.40.50.720 109 297 1.8E-110 T 14-10-2018 BD65_1284 2757eed508dc7762607f3533a263e50f 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BD65_1284 2757eed508dc7762607f3533a263e50f 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 6.2E-37 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BD65_1284 2757eed508dc7762607f3533a263e50f 413 Gene3D G3DSA:3.40.50.720 14 312 1.8E-110 T 14-10-2018 BD65_1284 2757eed508dc7762607f3533a263e50f 413 SUPERFAMILY SSF55021 339 412 6.87E-18 T 14-10-2018 BD65_1284 2757eed508dc7762607f3533a263e50f 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 3.6E-52 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BD65_1284 2757eed508dc7762607f3533a263e50f 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BD65_1284 2757eed508dc7762607f3533a263e50f 413 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BD65_1284 2757eed508dc7762607f3533a263e50f 413 Gene3D G3DSA:3.30.70.260 328 412 1.5E-31 T 14-10-2018 BD65_1284 2757eed508dc7762607f3533a263e50f 413 SUPERFAMILY SSF51735 108 295 1.76E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1284 2757eed508dc7762607f3533a263e50f 413 SUPERFAMILY SSF52283 7 135 1.11E-47 T 14-10-2018 BD65_2856 19e6567d58070a175d25bd33d82e5656 117 Pfam PF02635 DsrE/DsrF-like family 4 117 5.7E-20 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein BD65_2856 19e6567d58070a175d25bd33d82e5656 117 Gene3D G3DSA:3.40.1260.10 3 117 3.0E-31 T 14-10-2018 IPR027396 DsrEFH-like BD65_2856 19e6567d58070a175d25bd33d82e5656 117 SUPERFAMILY SSF75169 1 117 3.4E-32 T 14-10-2018 IPR027396 DsrEFH-like BD65_692 99b9731b5f5db8a6a79180858306ba09 369 Pfam PF02119 Flagellar P-ring protein 25 368 7.2E-135 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_692 99b9731b5f5db8a6a79180858306ba09 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 369 38.545 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_692 99b9731b5f5db8a6a79180858306ba09 369 PRINTS PR01010 Flagellar P-ring protein signature 191 209 2.1E-88 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_692 99b9731b5f5db8a6a79180858306ba09 369 PRINTS PR01010 Flagellar P-ring protein signature 108 125 2.1E-88 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_692 99b9731b5f5db8a6a79180858306ba09 369 PRINTS PR01010 Flagellar P-ring protein signature 125 143 2.1E-88 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_692 99b9731b5f5db8a6a79180858306ba09 369 PRINTS PR01010 Flagellar P-ring protein signature 165 183 2.1E-88 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_692 99b9731b5f5db8a6a79180858306ba09 369 PRINTS PR01010 Flagellar P-ring protein signature 40 55 2.1E-88 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_692 99b9731b5f5db8a6a79180858306ba09 369 PRINTS PR01010 Flagellar P-ring protein signature 25 40 2.1E-88 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_692 99b9731b5f5db8a6a79180858306ba09 369 PRINTS PR01010 Flagellar P-ring protein signature 60 75 2.1E-88 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_692 99b9731b5f5db8a6a79180858306ba09 369 PRINTS PR01010 Flagellar P-ring protein signature 86 105 2.1E-88 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_692 99b9731b5f5db8a6a79180858306ba09 369 PRINTS PR01010 Flagellar P-ring protein signature 255 267 2.1E-88 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BD65_2880 2492899aec38a27f8c5bd14c0427d081 126 SUPERFAMILY SSF53098 22 121 1.52E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2880 2492899aec38a27f8c5bd14c0427d081 126 Pfam PF00665 Integrase core domain 21 117 7.8E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_2880 2492899aec38a27f8c5bd14c0427d081 126 Gene3D G3DSA:3.30.420.10 10 124 6.6E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2189 f5c96bc314471519756f1e6d231811db 328 Gene3D G3DSA:3.90.550.10 5 205 1.6E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2189 f5c96bc314471519756f1e6d231811db 328 SUPERFAMILY SSF53448 6 229 1.83E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2189 f5c96bc314471519756f1e6d231811db 328 Pfam PF00535 Glycosyl transferase family 2 7 129 1.9E-30 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 178 9.7E-49 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 SUPERFAMILY SSF52467 193 352 4.3E-36 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 13 551 5.0E-259 T 14-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 331 7.3E-29 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 538 4.4E-38 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 Gene3D G3DSA:3.40.50.970 2 187 3.7E-64 T 14-10-2018 BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 Gene3D G3DSA:3.40.50.1220 190 358 2.5E-37 T 14-10-2018 BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 SUPERFAMILY SSF52518 371 552 5.9E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 SUPERFAMILY SSF52518 4 183 9.68E-47 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_221 fca1de3d1ab094d0b621e99ce408ec77 559 Gene3D G3DSA:3.40.50.970 366 559 1.6E-56 T 14-10-2018 BD65_345 68792265ac65a55a01edc98832269b99 486 Hamap MF_01932 AMP nucleosidase [amn]. 5 486 57.944 T 14-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 BD65_345 68792265ac65a55a01edc98832269b99 486 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 13 486 2.0E-222 T 14-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 BD65_345 68792265ac65a55a01edc98832269b99 486 Gene3D G3DSA:3.40.50.1580 175 486 2.2E-114 T 14-10-2018 BD65_345 68792265ac65a55a01edc98832269b99 486 Gene3D G3DSA:3.30.1730.10 4 174 6.3E-57 T 14-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 BD65_345 68792265ac65a55a01edc98832269b99 486 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 165 7.2E-49 T 14-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 BD65_345 68792265ac65a55a01edc98832269b99 486 SUPERFAMILY SSF53167 11 486 2.72E-156 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BD65_345 68792265ac65a55a01edc98832269b99 486 Pfam PF01048 Phosphorylase superfamily 269 433 1.5E-18 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BD65_2040 2c922ea80043f26454b4acfd80a7d16b 188 SMART SM00972 130 185 1.1E-6 T 14-10-2018 IPR007893 Spore coat protein U BD65_2040 2c922ea80043f26454b4acfd80a7d16b 188 Pfam PF05229 Spore Coat Protein U domain 46 185 4.1E-24 T 14-10-2018 IPR007893 Spore coat protein U BD65_2279 972758eddcab1a4d65c674975d8c967d 604 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 9.4E-244 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 Gene3D G3DSA:3.90.700.10 237 363 7.6E-164 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-5 T 14-10-2018 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.1E-5 T 14-10-2018 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 SUPERFAMILY SSF51905 3 417 4.21E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2279 972758eddcab1a4d65c674975d8c967d 604 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 SUPERFAMILY SSF56425 227 358 7.48E-43 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 Gene3D G3DSA:4.10.80.40 543 577 3.0E-19 T 14-10-2018 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.5E-10 T 14-10-2018 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.5E-10 T 14-10-2018 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 SUPERFAMILY SSF46977 444 591 2.35E-45 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 Gene3D G3DSA:1.20.58.100 424 538 5.7E-35 T 14-10-2018 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 Pfam PF00890 FAD binding domain 7 397 1.0E-113 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 PIRSF PIRSF000171 1 575 8.3E-42 T 14-10-2018 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 Gene3D G3DSA:3.50.50.60 7 409 7.6E-164 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2279 972758eddcab1a4d65c674975d8c967d 604 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.0E-37 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2279 972758eddcab1a4d65c674975d8c967d 604 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 14-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 BD65_3043 d5738aa029dfc4710e071863f787147a 385 SUPERFAMILY SSF74653 297 385 6.47E-21 T 14-10-2018 BD65_3043 d5738aa029dfc4710e071863f787147a 385 TIGRFAM TIGR02794 tolA_full: protein TolA 13 384 9.2E-94 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 BD65_3043 d5738aa029dfc4710e071863f787147a 385 Pfam PF06519 TolA C-terminal 290 382 2.1E-36 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 BD65_3043 d5738aa029dfc4710e071863f787147a 385 Gene3D G3DSA:3.30.1150.10 307 379 4.2E-35 T 14-10-2018 BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 Pfam PF02954 Bacterial regulatory protein, Fis family 358 397 1.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 Gene3D G3DSA:1.10.10.60 342 404 1.1E-10 T 14-10-2018 BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 Gene3D G3DSA:3.40.50.2300 1 124 4.2E-34 T 14-10-2018 BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 Gene3D G3DSA:3.40.50.300 132 275 7.7E-29 T 14-10-2018 BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 Pfam PF00072 Response regulator receiver domain 1 108 6.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 Pfam PF14532 Sigma-54 interaction domain 134 271 2.1E-21 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 SUPERFAMILY SSF46689 344 400 3.19E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 316 325 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 Gene3D G3DSA:1.10.8.60 276 341 7.7E-14 T 14-10-2018 BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 SUPERFAMILY SSF52540 133 332 7.67E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 SMART SM00448 1 108 2.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2814 873ef44766f600a202d3454bc8a3ec17 406 SUPERFAMILY SSF52172 1 178 7.54E-34 T 14-10-2018 IPR011006 CheY-like superfamily BD65_1486 ed1ec3cbc627f5d1f01d5abdec4d8a46 217 Gene3D G3DSA:3.40.50.880 1 217 5.6E-93 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_1486 ed1ec3cbc627f5d1f01d5abdec4d8a46 217 SUPERFAMILY SSF52317 1 215 7.23E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_1486 ed1ec3cbc627f5d1f01d5abdec4d8a46 217 PIRSF PIRSF006320 1 216 8.8E-105 T 14-10-2018 IPR026041 Glyoxalase ElbB BD65_1829 c17b4cc2d1c3a25716c36a1f6d789b69 294 SUPERFAMILY SSF51730 22 293 9.81E-96 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like BD65_1829 c17b4cc2d1c3a25716c36a1f6d789b69 294 Gene3D G3DSA:3.20.20.220 1 294 3.9E-117 T 14-10-2018 BD65_1829 c17b4cc2d1c3a25716c36a1f6d789b69 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.9E-103 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 BD65_1829 c17b4cc2d1c3a25716c36a1f6d789b69 294 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 5.7E-109 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BD65_1960 75d9e299d1b85c2cd6fef27e3297a726 197 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 5 186 3.8E-67 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 BD65_1960 75d9e299d1b85c2cd6fef27e3297a726 197 Pfam PF12804 MobA-like NTP transferase domain 7 157 1.8E-30 T 14-10-2018 IPR025877 MobA-like NTP transferase BD65_1960 75d9e299d1b85c2cd6fef27e3297a726 197 Gene3D G3DSA:3.90.550.10 2 197 2.9E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_1960 75d9e299d1b85c2cd6fef27e3297a726 197 SUPERFAMILY SSF53448 1 189 3.55E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_1960 75d9e299d1b85c2cd6fef27e3297a726 197 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 3 188 28.615 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 BD65_3004 6092b1195f0b26e92073f884b9a44e26 550 Gene3D G3DSA:1.10.287.950 215 518 1.2E-90 T 14-10-2018 BD65_3004 6092b1195f0b26e92073f884b9a44e26 550 SMART SM00283 269 516 7.0E-93 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_3004 6092b1195f0b26e92073f884b9a44e26 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 4.0E-63 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_3004 6092b1195f0b26e92073f884b9a44e26 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 4.0E-63 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_3004 6092b1195f0b26e92073f884b9a44e26 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 4.0E-63 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_3004 6092b1195f0b26e92073f884b9a44e26 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 4.0E-63 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_3004 6092b1195f0b26e92073f884b9a44e26 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 4.0E-63 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_3004 6092b1195f0b26e92073f884b9a44e26 550 SUPERFAMILY SSF58104 244 518 1.96E-71 T 14-10-2018 BD65_3004 6092b1195f0b26e92073f884b9a44e26 550 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 3.4E-55 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_3004 6092b1195f0b26e92073f884b9a44e26 550 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 14-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 244 259 1.2E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 1.2E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 1.2E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 132 145 1.2E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 1.2E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 1.2E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 1.2E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 878 18.258 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 SUPERFAMILY SSF51621 6 878 0.0 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 878 8.9E-289 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 133 144 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BD65_1827 0f45f3984d35d36e6be6cce88b3f0cfe 878 Gene3D G3DSA:1.20.1440.90 303 388 2.9E-22 T 14-10-2018 BD65_203 5721898a8c5f4a0c12f1cb629cdebdcc 270 SUPERFAMILY SSF52540 1 268 1.62E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_203 5721898a8c5f4a0c12f1cb629cdebdcc 270 PIRSF PIRSF003092 1 270 4.0E-97 T 14-10-2018 IPR025501 ATP binding protein MinD BD65_203 5721898a8c5f4a0c12f1cb629cdebdcc 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 5.6E-20 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BD65_203 5721898a8c5f4a0c12f1cb629cdebdcc 270 Gene3D G3DSA:3.40.50.300 1 260 2.4E-75 T 14-10-2018 BD65_203 5721898a8c5f4a0c12f1cb629cdebdcc 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 2.8E-110 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 BD65_2590 eccf4423fc4002b16c687cad1e6ace2f 540 ProSitePatterns PS00080 Multicopper oxidases signature 2. 521 532 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 BD65_2590 eccf4423fc4002b16c687cad1e6ace2f 540 Pfam PF00394 Multicopper oxidase 183 290 1.2E-7 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 BD65_2590 eccf4423fc4002b16c687cad1e6ace2f 540 SUPERFAMILY SSF49503 33 168 5.78E-34 T 14-10-2018 IPR008972 Cupredoxin BD65_2590 eccf4423fc4002b16c687cad1e6ace2f 540 Gene3D G3DSA:2.60.40.420 30 175 5.4E-45 T 14-10-2018 IPR008972 Cupredoxin BD65_2590 eccf4423fc4002b16c687cad1e6ace2f 540 Gene3D G3DSA:2.60.40.420 176 326 2.2E-44 T 14-10-2018 IPR008972 Cupredoxin BD65_2590 eccf4423fc4002b16c687cad1e6ace2f 540 Pfam PF07731 Multicopper oxidase 423 539 4.6E-26 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 BD65_2590 eccf4423fc4002b16c687cad1e6ace2f 540 Pfam PF07732 Multicopper oxidase 62 167 1.9E-31 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BD65_2590 eccf4423fc4002b16c687cad1e6ace2f 540 SUPERFAMILY SSF49503 173 291 1.39E-32 T 14-10-2018 IPR008972 Cupredoxin BD65_2590 eccf4423fc4002b16c687cad1e6ace2f 540 SUPERFAMILY SSF49503 423 538 4.7E-28 T 14-10-2018 IPR008972 Cupredoxin BD65_2590 eccf4423fc4002b16c687cad1e6ace2f 540 Gene3D G3DSA:2.60.40.420 346 539 1.2E-49 T 14-10-2018 IPR008972 Cupredoxin BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 SUPERFAMILY SSF81660 346 544 8.18E-44 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 341 347 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 498 516 1.6E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 613 629 1.6E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 641 657 1.6E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 673 698 1.6E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 SUPERFAMILY SSF81653 128 238 1.57E-30 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 Pfam PF00702 haloacid dehalogenase-like hydrolase 335 655 7.0E-23 T 14-10-2018 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 Pfam PF00690 Cation transporter/ATPase, N-terminus 19 85 1.9E-20 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 Pfam PF00689 Cation transporting ATPase, C-terminus 726 897 4.6E-42 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 Pfam PF00122 E1-E2 ATPase 126 319 4.1E-53 T 14-10-2018 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 730 1.5E-34 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 98 360 3.0E-40 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 562 572 1.3E-40 T 14-10-2018 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 677 1.3E-40 T 14-10-2018 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 551 1.3E-40 T 14-10-2018 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 176 190 1.3E-40 T 14-10-2018 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 660 1.3E-40 T 14-10-2018 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 339 353 1.3E-40 T 14-10-2018 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 Gene3D G3DSA:2.70.150.10 34 241 4.1E-286 T 14-10-2018 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 Gene3D G3DSA:3.40.1110.10 349 547 4.1E-286 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 Gene3D G3DSA:1.20.1110.10 69 896 4.1E-286 T 14-10-2018 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 Gene3D G3DSA:3.40.50.1000 336 686 4.1E-286 T 14-10-2018 IPR023214 HAD superfamily BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 SMART SM00831 18 91 2.3E-35 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 SUPERFAMILY SSF56784 337 744 3.63E-62 T 14-10-2018 IPR036412 HAD-like superfamily BD65_2484 2824c6e98e89f007394ce9f0657a7bee 908 SUPERFAMILY SSF81665 17 902 1.44E-118 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BD65_1666 9674bdf7819dad3a467ad4133ba16fa6 345 SUPERFAMILY SSF56194 205 342 5.89E-51 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_1666 9674bdf7819dad3a467ad4133ba16fa6 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 84.73 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_1666 9674bdf7819dad3a467ad4133ba16fa6 345 Gene3D G3DSA:3.90.78.10 222 345 1.1E-44 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_1666 9674bdf7819dad3a467ad4133ba16fa6 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 332 1.3E-104 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_1666 9674bdf7819dad3a467ad4133ba16fa6 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 208 332 6.4E-34 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_1666 9674bdf7819dad3a467ad4133ba16fa6 345 Gene3D G3DSA:3.30.43.10 7 71 7.3E-17 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BD65_1666 9674bdf7819dad3a467ad4133ba16fa6 345 SUPERFAMILY SSF56176 7 200 4.91E-42 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BD65_1666 9674bdf7819dad3a467ad4133ba16fa6 345 Gene3D G3DSA:3.30.465.10 72 221 1.4E-53 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BD65_1666 9674bdf7819dad3a467ad4133ba16fa6 345 Pfam PF01565 FAD binding domain 22 151 3.6E-23 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BD65_2147 9177539bc3e036d55dd8860810ed3c02 135 PIRSF PIRSF016821 8 135 2.2E-40 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 BD65_2147 9177539bc3e036d55dd8860810ed3c02 135 SMART SM00363 11 76 1.2E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2147 9177539bc3e036d55dd8860810ed3c02 135 Pfam PF01479 S4 domain 12 57 8.7E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2147 9177539bc3e036d55dd8860810ed3c02 135 SUPERFAMILY SSF55174 11 106 5.81E-30 T 14-10-2018 BD65_2147 9177539bc3e036d55dd8860810ed3c02 135 Gene3D G3DSA:3.10.290.10 4 110 5.5E-38 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BD65_2193 05ff3b465181989c41c56332090eb413 67 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 58 2.1E-20 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 BD65_2193 05ff3b465181989c41c56332090eb413 67 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 4 61 1.2E-30 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 BD65_1943 3cc097afda1f748007ec0d3a6101dbc9 468 Pfam PF00860 Permease family 40 432 2.0E-110 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BD65_1943 3cc097afda1f748007ec0d3a6101dbc9 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 381 401 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BD65_1943 3cc097afda1f748007ec0d3a6101dbc9 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 35 463 7.5E-140 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BD65_1943 3cc097afda1f748007ec0d3a6101dbc9 468 TIGRFAM TIGR03173 pbuX: xanthine permease 45 465 4.6E-127 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 BD65_207 e0d7440fc01106a6f3a61b8df09e0797 115 Gene3D G3DSA:1.10.443.10 14 67 1.5E-10 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BD65_207 e0d7440fc01106a6f3a61b8df09e0797 115 Pfam PF00589 Phage integrase family 16 50 1.9E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_207 e0d7440fc01106a6f3a61b8df09e0797 115 SUPERFAMILY SSF56349 17 65 2.27E-9 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_1771 5dc90d81811bd9100aed659ea51e4abe 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 81.106 T 14-10-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 BD65_1771 5dc90d81811bd9100aed659ea51e4abe 376 Gene3D G3DSA:3.90.1150.10 250 376 1.9E-26 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1771 5dc90d81811bd9100aed659ea51e4abe 376 Gene3D G3DSA:3.40.640.10 1 249 3.9E-82 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_1771 5dc90d81811bd9100aed659ea51e4abe 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 8.8E-211 T 14-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 BD65_1771 5dc90d81811bd9100aed659ea51e4abe 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 371 8.1E-85 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BD65_1771 5dc90d81811bd9100aed659ea51e4abe 376 PIRSF PIRSF000390 1 376 1.0E-114 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BD65_1771 5dc90d81811bd9100aed659ea51e4abe 376 SUPERFAMILY SSF53383 2 375 2.45E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_2790 3a5235eb7e34b5eb2b9c9ff91adb1322 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 3.8E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2790 3a5235eb7e34b5eb2b9c9ff91adb1322 229 SMART SM00448 3 116 1.5E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2790 3a5235eb7e34b5eb2b9c9ff91adb1322 229 SUPERFAMILY SSF46894 129 226 2.47E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2790 3a5235eb7e34b5eb2b9c9ff91adb1322 229 Gene3D G3DSA:1.10.10.10 128 229 1.5E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2790 3a5235eb7e34b5eb2b9c9ff91adb1322 229 SUPERFAMILY SSF52172 3 126 1.02E-42 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2790 3a5235eb7e34b5eb2b9c9ff91adb1322 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 9.2E-115 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 BD65_2790 3a5235eb7e34b5eb2b9c9ff91adb1322 229 Pfam PF00072 Response regulator receiver domain 5 117 9.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2790 3a5235eb7e34b5eb2b9c9ff91adb1322 229 SMART SM00862 150 225 8.3E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2790 3a5235eb7e34b5eb2b9c9ff91adb1322 229 Gene3D G3DSA:3.40.50.2300 1 127 7.3E-38 T 14-10-2018 BD65_685 9ad6b91492c4471cd5bfda947059df73 116 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 14 82 1.6E-21 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BD65_685 9ad6b91492c4471cd5bfda947059df73 116 Pfam PF04347 Flagellar biosynthesis protein, FliO 26 110 2.9E-23 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BD65_960 5dc7becab52dcc9775daf2d740c35f58 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 296 1.5E-86 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 BD65_960 5dc7becab52dcc9775daf2d740c35f58 299 SUPERFAMILY SSF54909 1 297 2.32E-92 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BD65_960 5dc7becab52dcc9775daf2d740c35f58 299 Pfam PF04261 Dyp-type peroxidase family 5 295 1.8E-93 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 SMART SM01004 9 333 4.5E-237 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 Gene3D G3DSA:3.20.20.70 3 337 1.5E-145 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 PIRSF PIRSF001415 2 336 2.7E-151 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 SUPERFAMILY SSF51569 7 335 1.36E-142 T 14-10-2018 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 5.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 5.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 5.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 5.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 5.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 5.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BD65_1682 a72d9b48dc611a2b0d8a45cf23d35932 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 3.6E-138 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BD65_2843 9f2dd2ab62a64db0e71c52a50548f259 153 SUPERFAMILY SSF46785 2 92 8.67E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2843 9f2dd2ab62a64db0e71c52a50548f259 153 Gene3D G3DSA:3.30.70.920 55 139 7.2E-24 T 14-10-2018 BD65_2843 9f2dd2ab62a64db0e71c52a50548f259 153 SMART SM00344 2 111 4.9E-40 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BD65_2843 9f2dd2ab62a64db0e71c52a50548f259 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 1.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BD65_2843 9f2dd2ab62a64db0e71c52a50548f259 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 1.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BD65_2843 9f2dd2ab62a64db0e71c52a50548f259 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 1.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BD65_2843 9f2dd2ab62a64db0e71c52a50548f259 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 3.1E-18 T 14-10-2018 BD65_2843 9f2dd2ab62a64db0e71c52a50548f259 153 Gene3D G3DSA:1.10.10.10 3 54 5.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2843 9f2dd2ab62a64db0e71c52a50548f259 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.3E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BD65_2843 9f2dd2ab62a64db0e71c52a50548f259 153 SUPERFAMILY SSF54909 62 151 1.47E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BD65_611 9cf123a7efec7a22897adb03f8a3a48c 453 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 3.2E-155 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BD65_611 9cf123a7efec7a22897adb03f8a3a48c 453 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 3.2E-155 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 BD65_611 9cf123a7efec7a22897adb03f8a3a48c 453 PIRSF PIRSF006351 1 447 1.1E-125 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BD65_611 9cf123a7efec7a22897adb03f8a3a48c 453 Pfam PF02378 Phosphotransferase system, EIIC 30 363 1.6E-44 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 Gene3D G3DSA:3.40.710.10 247 482 1.9E-67 T 14-10-2018 BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 291 313 2.3E-38 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 2.3E-38 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 429 442 2.3E-38 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 2.3E-38 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 2.3E-38 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 452 2.2E-165 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 25 473 1.2E-162 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 SUPERFAMILY SSF56601 28 478 1.55E-100 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 Gene3D G3DSA:3.50.80.20 92 186 1.6E-20 T 14-10-2018 BD65_2343 0d1c6c25cf362b452fc08a11d190626e 482 Gene3D G3DSA:3.40.710.10 26 91 4.7E-6 T 14-10-2018 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 Gene3D G3DSA:3.30.70.260 290 378 8.7E-24 T 14-10-2018 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 SUPERFAMILY SSF53850 104 290 7.82E-55 T 14-10-2018 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 SUPERFAMILY SSF48600 5 91 3.66E-21 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 PIRSF PIRSF001500 1 379 2.1E-139 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 Pfam PF00800 Prephenate dehydratase 105 285 1.6E-59 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 Gene3D G3DSA:1.20.59.10 1 106 3.0E-33 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 SUPERFAMILY SSF55021 279 376 1.74E-23 T 14-10-2018 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 Gene3D G3DSA:3.40.190.10 107 280 3.3E-54 T 14-10-2018 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 Pfam PF01817 Chorismate mutase type II 10 88 1.0E-16 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 7.4E-34 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 Gene3D G3DSA:3.40.190.10 188 273 3.3E-54 T 14-10-2018 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 SMART SM00830 10 90 3.4E-23 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BD65_2733 fd3adcc3cbcc3c8b2784dfc46b17563b 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BD65_497 306e412cd3d30034c354b72010efd7ee 109 Pfam PF07784 Protein of unknown function (DUF1622) 25 101 7.9E-25 T 14-10-2018 IPR012427 Protein of unknown function DUF1622 BD65_2333 c789b0bce8fc2742a7f8525d7698c03e 92 SUPERFAMILY SSF47413 4 71 3.66E-30 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_2333 c789b0bce8fc2742a7f8525d7698c03e 92 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 4.9E-37 T 14-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain BD65_2333 c789b0bce8fc2742a7f8525d7698c03e 92 Gene3D G3DSA:1.10.260.40 3 71 2.0E-33 T 14-10-2018 BD65_3014 fb2856854b388bc076da54c19e922c04 562 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 9.9E-242 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BD65_3014 fb2856854b388bc076da54c19e922c04 562 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 1.1E-260 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BD65_3014 fb2856854b388bc076da54c19e922c04 562 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.22 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BD65_3014 fb2856854b388bc076da54c19e922c04 562 PIRSF PIRSF001294 1 560 3.3E-240 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BD65_1851 fc12de7963cb2f92013767f57e7813d0 144 Pfam PF05656 Protein of unknown function (DUF805) 7 133 1.4E-21 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 BD65_2466 259f74b4436826a6b369e518ffa80ceb 346 Pfam PF05175 Methyltransferase small domain 166 333 4.3E-58 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BD65_2466 259f74b4436826a6b369e518ffa80ceb 346 Gene3D G3DSA:3.40.50.150 159 341 4.0E-46 T 14-10-2018 BD65_2466 259f74b4436826a6b369e518ffa80ceb 346 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 6.5E-59 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 BD65_2466 259f74b4436826a6b369e518ffa80ceb 346 Gene3D G3DSA:3.40.50.150 1 158 6.2E-58 T 14-10-2018 BD65_2466 259f74b4436826a6b369e518ffa80ceb 346 SUPERFAMILY SSF53335 154 315 9.41E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2466 259f74b4436826a6b369e518ffa80ceb 346 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.355 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 BD65_2466 259f74b4436826a6b369e518ffa80ceb 346 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_2245 5fd0bf068c13dcca15be13a5df3bd3cc 189 Gene3D G3DSA:3.90.870.10 3 187 9.0E-61 T 14-10-2018 BD65_2245 5fd0bf068c13dcca15be13a5df3bd3cc 189 SUPERFAMILY SSF55821 8 185 4.58E-53 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BD65_2245 5fd0bf068c13dcca15be13a5df3bd3cc 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 6 187 40.799 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 BD65_2245 5fd0bf068c13dcca15be13a5df3bd3cc 189 Pfam PF01300 Telomere recombination 14 165 3.7E-40 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 BD65_416 4ee9486ba4b50b96d93a5dd5d27543f8 504 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BD65_416 4ee9486ba4b50b96d93a5dd5d27543f8 504 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 19 487 5.2E-138 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BD65_416 4ee9486ba4b50b96d93a5dd5d27543f8 504 Pfam PF00854 POT family 91 447 4.1E-87 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BD65_416 4ee9486ba4b50b96d93a5dd5d27543f8 504 Gene3D G3DSA:1.20.1250.20 13 488 2.1E-113 T 14-10-2018 BD65_416 4ee9486ba4b50b96d93a5dd5d27543f8 504 SUPERFAMILY SSF103473 18 489 5.49E-30 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_416 4ee9486ba4b50b96d93a5dd5d27543f8 504 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 491 53.177 T 14-10-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0016020|GO:1904680 BD65_1562 37f74c24b16d6987da5e451425c359ac 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 2.5E-102 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BD65_1562 37f74c24b16d6987da5e451425c359ac 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 68.884 T 14-10-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 BD65_1562 37f74c24b16d6987da5e451425c359ac 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.564 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 BD65_1562 37f74c24b16d6987da5e451425c359ac 306 PIRSF PIRSF026649 2 306 8.1E-96 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BD65_1562 37f74c24b16d6987da5e451425c359ac 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 1.1E-137 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 4.0E-54 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 4.0E-54 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 4.0E-54 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 4.0E-54 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 4.0E-54 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 4.0E-54 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 Pfam PF00326 Prolyl oligopeptidase family 461 674 1.1E-69 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 12 404 5.6E-102 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 Gene3D G3DSA:2.130.10.120 74 405 3.1E-256 T 14-10-2018 BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 Gene3D G3DSA:3.40.50.1820 23 674 3.1E-256 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 SUPERFAMILY SSF53474 414 655 1.1E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_549 81abfc67ac2ef8b93ac420d10f6f9183 676 SUPERFAMILY SSF50993 2 406 2.88E-87 T 14-10-2018 BD65_363 2568db27f704b3b40fbbcdd5d206a825 462 SUPERFAMILY SSF52467 289 462 6.54E-75 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BD65_363 2568db27f704b3b40fbbcdd5d206a825 462 PIRSF PIRSF000204 1 462 9.3E-234 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 BD65_363 2568db27f704b3b40fbbcdd5d206a825 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 8.5E-201 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BD65_363 2568db27f704b3b40fbbcdd5d206a825 462 Gene3D G3DSA:3.40.50.1220 286 462 7.2E-85 T 14-10-2018 BD65_2425 d1777e7ee8b130112074807b4b7ca717 52 Pfam PF13708 Domain of unknown function (DUF4942) 8 46 1.2E-11 T 14-10-2018 IPR031339 Domain of unknown function DUF4942 BD65_989 2ae5306ccb854d21e8621dfa77bd0447 156 SUPERFAMILY SSF52833 1 154 7.71E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_989 2ae5306ccb854d21e8621dfa77bd0447 156 PIRSF PIRSF000239 1 152 9.9E-17 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BD65_989 2ae5306ccb854d21e8621dfa77bd0447 156 Pfam PF00578 AhpC/TSA family 7 134 1.3E-37 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BD65_989 2ae5306ccb854d21e8621dfa77bd0447 156 Gene3D G3DSA:3.40.30.10 4 156 1.2E-46 T 14-10-2018 BD65_1536 1287c75f6a73ecab1e31abea3da5a7f0 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 288 299 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BD65_1536 1287c75f6a73ecab1e31abea3da5a7f0 489 Pfam PF00171 Aldehyde dehydrogenase family 29 483 3.3E-170 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BD65_1536 1287c75f6a73ecab1e31abea3da5a7f0 489 Gene3D G3DSA:3.40.309.10 264 453 3.8E-180 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BD65_1536 1287c75f6a73ecab1e31abea3da5a7f0 489 SUPERFAMILY SSF53720 11 487 8.77E-169 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BD65_1536 1287c75f6a73ecab1e31abea3da5a7f0 489 Gene3D G3DSA:3.40.605.10 32 478 3.8E-180 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BD65_1536 1287c75f6a73ecab1e31abea3da5a7f0 489 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 36 482 6.9E-206 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 BD65_1536 1287c75f6a73ecab1e31abea3da5a7f0 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 260 267 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BD65_1642 0f9c8152515c58a086d29ee363763db2 678 Pfam PF01964 Radical SAM ThiC family 166 614 6.1E-200 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BD65_1642 0f9c8152515c58a086d29ee363763db2 678 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 165 618 99.856 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BD65_1642 0f9c8152515c58a086d29ee363763db2 678 Gene3D G3DSA:3.20.20.540 236 549 2.3E-153 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BD65_1642 0f9c8152515c58a086d29ee363763db2 678 Pfam PF13667 ThiC-associated domain 44 125 4.3E-32 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BD65_1642 0f9c8152515c58a086d29ee363763db2 678 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 165 617 1.3E-223 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 Hamap MF_00186 Glycerol kinase [glpK]. 9 503 59.758 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 PIRSF PIRSF000538 9 506 2.3E-178 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 10 502 2.8E-229 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 SUPERFAMILY SSF53067 10 261 6.11E-95 T 14-10-2018 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 267 456 2.1E-62 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 Gene3D G3DSA:3.30.420.40 7 259 2.3E-115 T 14-10-2018 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 258 8.4E-92 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 Gene3D G3DSA:3.30.420.40 260 506 4.2E-96 T 14-10-2018 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 368 388 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 SUPERFAMILY SSF53067 261 503 7.29E-87 T 14-10-2018 BD65_1847 8e501500a4c7344dbdd3ac584eaf5425 506 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 141 153 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BD65_997 94cad5139b4cc138ebb5cd0906259e3a 213 SUPERFAMILY SSF53328 2 199 7.46E-67 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_997 94cad5139b4cc138ebb5cd0906259e3a 213 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.629 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BD65_997 94cad5139b4cc138ebb5cd0906259e3a 213 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_997 94cad5139b4cc138ebb5cd0906259e3a 213 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 1.2E-79 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BD65_997 94cad5139b4cc138ebb5cd0906259e3a 213 Pfam PF00551 Formyl transferase 2 182 6.2E-66 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_997 94cad5139b4cc138ebb5cd0906259e3a 213 Gene3D G3DSA:3.40.50.170 2 213 6.4E-88 T 14-10-2018 BD65_397 fadb8925e8800ffc8d46ce48a859ab6c 167 Hamap MF_00269 Thiol peroxidase [tpx]. 4 167 39.661 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 BD65_397 fadb8925e8800ffc8d46ce48a859ab6c 167 Gene3D G3DSA:3.40.30.10 1 167 1.9E-47 T 14-10-2018 BD65_397 fadb8925e8800ffc8d46ce48a859ab6c 167 Pfam PF08534 Redoxin 20 163 1.5E-29 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BD65_397 fadb8925e8800ffc8d46ce48a859ab6c 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 BD65_397 fadb8925e8800ffc8d46ce48a859ab6c 167 SUPERFAMILY SSF52833 4 163 2.29E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1569 6b9c7ce10e54b9b8a93c51b1751e5391 222 Pfam PF14497 Glutathione S-transferase, C-terminal domain 139 207 4.3E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal BD65_1569 6b9c7ce10e54b9b8a93c51b1751e5391 222 Gene3D G3DSA:3.40.30.10 1 84 4.0E-36 T 14-10-2018 BD65_1569 6b9c7ce10e54b9b8a93c51b1751e5391 222 Gene3D G3DSA:1.20.1050.10 85 212 7.5E-28 T 14-10-2018 BD65_1569 6b9c7ce10e54b9b8a93c51b1751e5391 222 SUPERFAMILY SSF47616 82 215 1.53E-21 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BD65_1569 6b9c7ce10e54b9b8a93c51b1751e5391 222 SUPERFAMILY SSF52833 3 78 1.63E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1569 6b9c7ce10e54b9b8a93c51b1751e5391 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 74 1.3E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BD65_325 a9fd57e03c7bed4b1926edcc79a0bef3 348 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.1E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BD65_325 a9fd57e03c7bed4b1926edcc79a0bef3 348 Gene3D G3DSA:3.30.360.10 127 330 1.2E-134 T 14-10-2018 BD65_325 a9fd57e03c7bed4b1926edcc79a0bef3 348 SUPERFAMILY SSF51735 4 196 3.43E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_325 a9fd57e03c7bed4b1926edcc79a0bef3 348 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 240 6.8E-13 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BD65_325 a9fd57e03c7bed4b1926edcc79a0bef3 348 Gene3D G3DSA:3.40.50.720 5 316 1.2E-134 T 14-10-2018 BD65_1945 4eb7f24e6ff357e734b512d8426759b5 307 Gene3D G3DSA:3.10.129.10 147 299 7.8E-46 T 14-10-2018 BD65_1945 4eb7f24e6ff357e734b512d8426759b5 307 Pfam PF00583 Acetyltransferase (GNAT) family 21 122 1.2E-13 T 14-10-2018 IPR000182 GNAT domain BD65_1945 4eb7f24e6ff357e734b512d8426759b5 307 SUPERFAMILY SSF54637 155 297 1.16E-42 T 14-10-2018 IPR029069 HotDog domain superfamily BD65_1945 4eb7f24e6ff357e734b512d8426759b5 307 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 8.6E-50 T 14-10-2018 IPR012660 Thioesterase, putative BD65_1945 4eb7f24e6ff357e734b512d8426759b5 307 Gene3D G3DSA:3.40.630.30 3 145 1.8E-24 T 14-10-2018 BD65_1945 4eb7f24e6ff357e734b512d8426759b5 307 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 4.1E-50 T 14-10-2018 IPR012660 Thioesterase, putative BD65_1945 4eb7f24e6ff357e734b512d8426759b5 307 SUPERFAMILY SSF55729 2 170 3.43E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_226 c84e7b9e9f941f74b74e54b049591b13 291 Pfam PF01263 Aldose 1-epimerase 28 272 6.4E-45 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BD65_226 c84e7b9e9f941f74b74e54b049591b13 291 Gene3D G3DSA:2.70.98.10 1 289 1.0E-93 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BD65_226 c84e7b9e9f941f74b74e54b049591b13 291 SUPERFAMILY SSF74650 8 271 2.95E-70 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BD65_226 c84e7b9e9f941f74b74e54b049591b13 291 PIRSF PIRSF016020 9 287 1.5E-54 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 BD65_60 6983f59a5c14ffd18d3799b7e2215a44 265 Gene3D G3DSA:3.20.10.10 121 265 4.6E-50 T 14-10-2018 BD65_60 6983f59a5c14ffd18d3799b7e2215a44 265 Pfam PF01063 Amino-transferase class IV 24 245 7.1E-46 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BD65_60 6983f59a5c14ffd18d3799b7e2215a44 265 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BD65_60 6983f59a5c14ffd18d3799b7e2215a44 265 SUPERFAMILY SSF56752 2 258 4.32E-65 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BD65_60 6983f59a5c14ffd18d3799b7e2215a44 265 Gene3D G3DSA:3.30.470.10 1 108 1.2E-30 T 14-10-2018 BD65_60 6983f59a5c14ffd18d3799b7e2215a44 265 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 1.6E-115 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 BD65_988 2f0cc3cea5e70ec6077e46baa90769b2 189 SUPERFAMILY SSF55021 91 179 1.5E-18 T 14-10-2018 BD65_988 2f0cc3cea5e70ec6077e46baa90769b2 189 PIRSF PIRSF028103 5 180 6.4E-65 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 BD65_988 2f0cc3cea5e70ec6077e46baa90769b2 189 Gene3D G3DSA:3.30.70.260 5 88 2.9E-25 T 14-10-2018 BD65_988 2f0cc3cea5e70ec6077e46baa90769b2 189 Gene3D G3DSA:3.30.70.260 91 188 2.3E-32 T 14-10-2018 BD65_988 2f0cc3cea5e70ec6077e46baa90769b2 189 SUPERFAMILY SSF55021 7 85 1.04E-16 T 14-10-2018 BD65_988 2f0cc3cea5e70ec6077e46baa90769b2 189 Pfam PF13740 ACT domain 7 82 5.4E-26 T 14-10-2018 BD65_623 d39050f74b6340e849fd6dab9e9cb8e3 531 Pfam PF13520 Amino acid permease 22 456 1.2E-60 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_623 d39050f74b6340e849fd6dab9e9cb8e3 531 PIRSF PIRSF006060 2 487 1.1E-53 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_623 d39050f74b6340e849fd6dab9e9cb8e3 531 TIGRFAM TIGR03813 put_Glu_GABA_T: putative glutamate/gamma-aminobutyrate antiporter 16 489 2.0E-264 T 14-10-2018 IPR022520 Putative glutamate/gamma-aminobutyrate antiporter BD65_623 d39050f74b6340e849fd6dab9e9cb8e3 531 Gene3D G3DSA:1.20.1740.10 16 475 3.5E-32 T 14-10-2018 BD65_3059 539dc022d99c980666fb093866de2aa1 352 SUPERFAMILY SSF54197 4 177 4.2E-70 T 14-10-2018 IPR036265 HIT-like superfamily BD65_3059 539dc022d99c980666fb093866de2aa1 352 SUPERFAMILY SSF54197 179 345 1.62E-52 T 14-10-2018 IPR036265 HIT-like superfamily BD65_3059 539dc022d99c980666fb093866de2aa1 352 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 346 1.9E-65 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BD65_3059 539dc022d99c980666fb093866de2aa1 352 Gene3D G3DSA:3.30.428.10 176 350 4.9E-66 T 14-10-2018 IPR036265 HIT-like superfamily BD65_3059 539dc022d99c980666fb093866de2aa1 352 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BD65_3059 539dc022d99c980666fb093866de2aa1 352 Gene3D G3DSA:3.30.428.10 45 175 4.9E-55 T 14-10-2018 IPR036265 HIT-like superfamily BD65_3059 539dc022d99c980666fb093866de2aa1 352 PIRSF PIRSF000808 1 341 3.2E-116 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BD65_3059 539dc022d99c980666fb093866de2aa1 352 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 2 347 3.4E-195 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BD65_3059 539dc022d99c980666fb093866de2aa1 352 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 176 1.5E-66 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BD65_2923 7f5e429de10c4ad5f8a9af727ff1c00a 177 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 91 147 4.8E-9 T 14-10-2018 IPR000477 Reverse transcriptase domain BD65_2923 7f5e429de10c4ad5f8a9af727ff1c00a 177 SUPERFAMILY SSF56672 50 151 2.89E-16 T 14-10-2018 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 SUPERFAMILY SSF51905 10 323 1.9E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 Gene3D G3DSA:1.10.10.1100 421 493 2.7E-17 T 14-10-2018 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 Gene3D G3DSA:3.30.9.10 87 319 4.3E-79 T 14-10-2018 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 15 32 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 Gene3D G3DSA:3.50.50.60 11 367 4.3E-79 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 539 2.8E-268 T 14-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 33 5.8E-23 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 5.8E-23 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 83 95 5.8E-23 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 10 22 5.8E-23 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 5.8E-23 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 51 5.8E-23 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 Pfam PF01266 FAD dependent oxidoreductase 11 360 3.0E-55 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BD65_1734 d8fd484508fdc8dfbf4635b326437f8b 551 Pfam PF04324 BFD-like [2Fe-2S] binding domain 433 485 1.1E-9 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BD65_1736 c45d9d7b59faccd5f198ed2d0f6f0443 358 SUPERFAMILY SSF51695 28 351 2.88E-94 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_1736 c45d9d7b59faccd5f198ed2d0f6f0443 358 Gene3D G3DSA:3.20.20.190 25 352 1.1E-134 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_1736 c45d9d7b59faccd5f198ed2d0f6f0443 358 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 346 7.5E-74 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BD65_2321 caf3beb5bc3c10499fa436b442ee5600 246 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 1 246 40.693 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 BD65_2321 caf3beb5bc3c10499fa436b442ee5600 246 SUPERFAMILY SSF56655 1 242 1.57E-71 T 14-10-2018 BD65_2321 caf3beb5bc3c10499fa436b442ee5600 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 BD65_2321 caf3beb5bc3c10499fa436b442ee5600 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 6.4E-101 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 BD65_2321 caf3beb5bc3c10499fa436b442ee5600 246 Gene3D G3DSA:3.30.540.10 1 146 8.2E-43 T 14-10-2018 BD65_2321 caf3beb5bc3c10499fa436b442ee5600 246 Gene3D G3DSA:3.40.190.80 147 245 9.7E-32 T 14-10-2018 BD65_2321 caf3beb5bc3c10499fa436b442ee5600 246 Pfam PF00459 Inositol monophosphatase family 6 233 6.8E-46 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BD65_206 e5f1d2601993a3349b0d5ff33fee9596 218 Gene3D G3DSA:3.90.850.10 1 218 1.1E-75 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BD65_206 e5f1d2601993a3349b0d5ff33fee9596 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 205 7.3E-53 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BD65_206 e5f1d2601993a3349b0d5ff33fee9596 218 SUPERFAMILY SSF56529 11 210 1.7E-68 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BD65_2452 88535a4e92d5ddaf1df1aa7d69708860 396 SUPERFAMILY SSF53756 34 378 4.24E-73 T 14-10-2018 BD65_2452 88535a4e92d5ddaf1df1aa7d69708860 396 Gene3D G3DSA:3.40.50.2000 28 193 4.2E-35 T 14-10-2018 BD65_2452 88535a4e92d5ddaf1df1aa7d69708860 396 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 35 375 2.6E-114 T 14-10-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative BD65_2452 88535a4e92d5ddaf1df1aa7d69708860 396 Gene3D G3DSA:3.40.50.2000 198 379 1.3E-39 T 14-10-2018 BD65_2452 88535a4e92d5ddaf1df1aa7d69708860 396 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 108 341 9.4E-42 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 BD65_3241 7760bbfe7904f69d64bea000102b85d3 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 4.1E-156 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BD65_3241 7760bbfe7904f69d64bea000102b85d3 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BD65_3241 7760bbfe7904f69d64bea000102b85d3 361 Gene3D G3DSA:3.40.640.10 16 258 5.3E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_3241 7760bbfe7904f69d64bea000102b85d3 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 51.413 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BD65_3241 7760bbfe7904f69d64bea000102b85d3 361 Pfam PF00266 Aminotransferase class-V 4 349 5.6E-64 T 14-10-2018 IPR000192 Aminotransferase class V domain BD65_3241 7760bbfe7904f69d64bea000102b85d3 361 Gene3D G3DSA:3.90.1150.10 259 361 8.4E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_3241 7760bbfe7904f69d64bea000102b85d3 361 PIRSF PIRSF000525 1 361 1.9E-148 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BD65_3241 7760bbfe7904f69d64bea000102b85d3 361 SUPERFAMILY SSF53383 1 359 4.9E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_1979 7e64fc59641f8546705bb09d4d56015b 146 Gene3D G3DSA:3.40.50.360 1 146 4.5E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_1979 7e64fc59641f8546705bb09d4d56015b 146 PRINTS PR00369 Flavodoxin signature 51 62 1.8E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_1979 7e64fc59641f8546705bb09d4d56015b 146 PRINTS PR00369 Flavodoxin signature 82 92 1.8E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_1979 7e64fc59641f8546705bb09d4d56015b 146 PRINTS PR00369 Flavodoxin signature 5 18 1.8E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_1979 7e64fc59641f8546705bb09d4d56015b 146 PRINTS PR00369 Flavodoxin signature 106 125 1.8E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_1979 7e64fc59641f8546705bb09d4d56015b 146 Pfam PF00258 Flavodoxin 7 138 2.1E-28 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BD65_1979 7e64fc59641f8546705bb09d4d56015b 146 SUPERFAMILY SSF52218 1 146 1.03E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_1150 571be5b0c27268c9e9d21e9cb764a545 514 SUPERFAMILY SSF103473 5 499 2.22E-74 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_1150 571be5b0c27268c9e9d21e9cb764a545 514 Gene3D G3DSA:1.20.1720.10 14 210 2.7E-48 T 14-10-2018 BD65_1150 571be5b0c27268c9e9d21e9cb764a545 514 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 497 5.8E-211 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BD65_1150 571be5b0c27268c9e9d21e9cb764a545 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 6.5E-5 T 14-10-2018 BD65_1150 571be5b0c27268c9e9d21e9cb764a545 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 6.5E-5 T 14-10-2018 BD65_1150 571be5b0c27268c9e9d21e9cb764a545 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 6.5E-5 T 14-10-2018 BD65_1150 571be5b0c27268c9e9d21e9cb764a545 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 6.5E-5 T 14-10-2018 BD65_1150 571be5b0c27268c9e9d21e9cb764a545 514 Pfam PF07690 Major Facilitator Superfamily 18 412 2.8E-54 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2496 46e509046917f7f17c12b6c564f15033 317 SUPERFAMILY SSF51569 1 316 8.37E-115 T 14-10-2018 BD65_2496 46e509046917f7f17c12b6c564f15033 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 8.5E-162 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BD65_2496 46e509046917f7f17c12b6c564f15033 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BD65_2496 46e509046917f7f17c12b6c564f15033 317 Gene3D G3DSA:3.20.20.70 2 317 1.2E-147 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2496 46e509046917f7f17c12b6c564f15033 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 4.8E-101 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BD65_2496 46e509046917f7f17c12b6c564f15033 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.366 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BD65_2496 46e509046917f7f17c12b6c564f15033 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 SUPERFAMILY SSF88659 152 238 1.53E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 SUPERFAMILY SSF88659 90 164 6.54E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 Gene3D G3DSA:1.20.140.160 87 239 1.0E-45 T 14-10-2018 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 Gene3D G3DSA:1.10.1740.10 4 85 4.1E-27 T 14-10-2018 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 Pfam PF04545 Sigma-70, region 4 185 234 2.7E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 Pfam PF04539 Sigma-70 region 3 97 163 1.8E-15 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 62.983 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 SUPERFAMILY SSF88946 5 88 1.88E-23 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 PIRSF PIRSF000770 3 240 9.7E-40 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 1.0E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 1.7E-83 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 1.6E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.6E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 1.6E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 1.6E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 1.6E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_664 fa974dbdf9817d8bff9827ec4f835187 240 Pfam PF04542 Sigma-70 region 2 16 88 2.2E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BD65_1119 f7c6326671f6f0314d7269618e265bd8 201 Pfam PF01380 SIS domain 40 169 1.5E-19 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_1119 f7c6326671f6f0314d7269618e265bd8 201 Gene3D G3DSA:3.40.50.10490 9 199 7.8E-47 T 14-10-2018 BD65_1119 f7c6326671f6f0314d7269618e265bd8 201 SUPERFAMILY SSF53697 16 190 1.75E-34 T 14-10-2018 BD65_1602 203a5c73c2dc7b197dc0e71e98457824 697 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 492 615 1.3E-25 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_1602 203a5c73c2dc7b197dc0e71e98457824 697 Gene3D G3DSA:3.40.50.300 427 631 7.0E-40 T 14-10-2018 BD65_1602 203a5c73c2dc7b197dc0e71e98457824 697 SUPERFAMILY SSF52540 443 686 4.6E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1602 203a5c73c2dc7b197dc0e71e98457824 697 Gene3D G3DSA:1.10.8.60 632 695 2.0E-5 T 14-10-2018 BD65_1602 203a5c73c2dc7b197dc0e71e98457824 697 SMART SM00382 487 619 2.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_334 a923cbe35ec384fd9e26773f896c6263 222 SUPERFAMILY SSF52540 1 207 4.25E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_334 a923cbe35ec384fd9e26773f896c6263 222 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 24.456 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BD65_334 a923cbe35ec384fd9e26773f896c6263 222 Gene3D G3DSA:3.40.50.300 3 220 5.7E-54 T 14-10-2018 BD65_334 a923cbe35ec384fd9e26773f896c6263 222 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 2.7E-42 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BD65_334 a923cbe35ec384fd9e26773f896c6263 222 Pfam PF13500 AAA domain 4 205 2.1E-30 T 14-10-2018 BD65_334 a923cbe35ec384fd9e26773f896c6263 222 PIRSF PIRSF006755 1 221 7.1E-65 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BD65_1679 ddaf3956ffae77dce936a2eccbae1470 498 Gene3D G3DSA:1.20.5.570 458 497 9.5E-19 T 14-10-2018 BD65_1679 ddaf3956ffae77dce936a2eccbae1470 498 Gene3D G3DSA:3.40.1670.10 340 457 2.9E-52 T 14-10-2018 BD65_1679 ddaf3956ffae77dce936a2eccbae1470 498 SUPERFAMILY SSF143968 326 489 6.93E-68 T 14-10-2018 BD65_1679 ddaf3956ffae77dce936a2eccbae1470 498 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 6.5E-188 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BD65_1679 ddaf3956ffae77dce936a2eccbae1470 498 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.723 T 14-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BD65_1679 ddaf3956ffae77dce936a2eccbae1470 498 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 2.3E-173 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BD65_1679 ddaf3956ffae77dce936a2eccbae1470 498 SUPERFAMILY SSF50475 6 325 9.81E-128 T 14-10-2018 BD65_3053 03d365d8938fd8a1069871774bfb712c 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 2.1E-178 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BD65_3053 03d365d8938fd8a1069871774bfb712c 350 PIRSF PIRSF001361 1 350 1.4E-165 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BD65_3053 03d365d8938fd8a1069871774bfb712c 350 Pfam PF00793 DAHP synthetase I family 40 338 3.9E-110 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BD65_3053 03d365d8938fd8a1069871774bfb712c 350 SUPERFAMILY SSF51569 7 348 5.13E-138 T 14-10-2018 BD65_3053 03d365d8938fd8a1069871774bfb712c 350 Gene3D G3DSA:3.20.20.70 1 350 1.0E-170 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 SUPERFAMILY SSF48168 13 172 3.4E-59 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 Gene3D G3DSA:3.20.70.20 158 693 3.9E-199 T 14-10-2018 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 564 586 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 SUPERFAMILY SSF51998 173 696 2.5E-184 T 14-10-2018 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 Pfam PF08343 Ribonucleotide reductase N-terminal 14 95 6.5E-33 T 14-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 424 447 1.2E-33 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 249 268 1.2E-33 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 463 485 1.2E-33 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 491 514 1.2E-33 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 380 391 1.2E-33 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 575 602 1.2E-33 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 Gene3D G3DSA:1.10.1650.20 292 344 3.9E-199 T 14-10-2018 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 13 712 0.0 T 14-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 Pfam PF02867 Ribonucleotide reductase, barrel domain 174 691 1.4E-140 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 101 694 1.8E-159 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1140 c35681c9cd37891ef7e7ea3010b2b96b 712 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 97 169 3.0E-12 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_1269 3fa1db814c82a118ed78998459c6879d 88 SUPERFAMILY SSF109910 2 78 1.07E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily BD65_1269 3fa1db814c82a118ed78998459c6879d 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 5.1E-25 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase BD65_1269 3fa1db814c82a118ed78998459c6879d 88 Gene3D G3DSA:1.10.150.250 1 88 4.9E-38 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily BD65_878 13904b589af1d2954063aba0a7be757d 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 1.0E-25 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BD65_878 13904b589af1d2954063aba0a7be757d 336 SMART SM00859 6 121 6.8E-36 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BD65_878 13904b589af1d2954063aba0a7be757d 336 PIRSF PIRSF000148 4 336 1.5E-96 T 14-10-2018 BD65_878 13904b589af1d2954063aba0a7be757d 336 SUPERFAMILY SSF51735 5 157 6.48E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_878 13904b589af1d2954063aba0a7be757d 336 SUPERFAMILY SSF55347 132 318 3.08E-50 T 14-10-2018 BD65_878 13904b589af1d2954063aba0a7be757d 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 3.1E-33 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BD65_878 13904b589af1d2954063aba0a7be757d 336 Gene3D G3DSA:3.40.50.720 7 328 8.2E-109 T 14-10-2018 BD65_878 13904b589af1d2954063aba0a7be757d 336 Gene3D G3DSA:3.30.360.10 130 314 8.2E-109 T 14-10-2018 BD65_1905 f685dbf9d53adad9decbb39bcf28312f 156 Gene3D G3DSA:3.10.420.10 1 154 1.3E-62 T 14-10-2018 IPR035958 SecB-like superfamily BD65_1905 f685dbf9d53adad9decbb39bcf28312f 156 Pfam PF02556 Preprotein translocase subunit SecB 5 144 1.4E-57 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BD65_1905 f685dbf9d53adad9decbb39bcf28312f 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.674 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BD65_1905 f685dbf9d53adad9decbb39bcf28312f 156 SUPERFAMILY SSF54611 2 141 1.09E-53 T 14-10-2018 IPR035958 SecB-like superfamily BD65_1905 f685dbf9d53adad9decbb39bcf28312f 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 144 1.3E-69 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BD65_1905 f685dbf9d53adad9decbb39bcf28312f 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 8.4E-42 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BD65_1905 f685dbf9d53adad9decbb39bcf28312f 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 8.4E-42 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BD65_1905 f685dbf9d53adad9decbb39bcf28312f 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 8.4E-42 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BD65_1905 f685dbf9d53adad9decbb39bcf28312f 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 8.4E-42 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BD65_200 909d38e687a303a9ff18177f72adf606 562 Gene3D G3DSA:3.30.300.310 456 559 2.9E-30 T 14-10-2018 BD65_200 909d38e687a303a9ff18177f72adf606 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 1.8E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BD65_200 909d38e687a303a9ff18177f72adf606 562 SUPERFAMILY SSF56801 17 553 2.62E-151 T 14-10-2018 BD65_200 909d38e687a303a9ff18177f72adf606 562 Gene3D G3DSA:3.40.50.12780 12 451 6.1E-118 T 14-10-2018 BD65_200 909d38e687a303a9ff18177f72adf606 562 Pfam PF00501 AMP-binding enzyme 29 460 5.7E-110 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_200 909d38e687a303a9ff18177f72adf606 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_2799 4862fc6444fe99dc605992aed01ee55f 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 4.7E-131 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BD65_2799 4862fc6444fe99dc605992aed01ee55f 356 SUPERFAMILY SSF111337 1 343 3.27E-137 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BD65_2799 4862fc6444fe99dc605992aed01ee55f 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 46.999 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BD65_2799 4862fc6444fe99dc605992aed01ee55f 356 Gene3D G3DSA:3.40.1780.10 14 343 1.2E-116 T 14-10-2018 BD65_2799 4862fc6444fe99dc605992aed01ee55f 356 Gene3D G3DSA:2.40.10.240 64 163 1.2E-116 T 14-10-2018 BD65_2799 4862fc6444fe99dc605992aed01ee55f 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 343 8.6E-158 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BD65_1186 06905c4194097418db7e07861c4f4742 165 Pfam PF03938 Outer membrane protein (OmpH-like) 10 163 3.6E-37 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 BD65_1186 06905c4194097418db7e07861c4f4742 165 PIRSF PIRSF002094 1 165 2.6E-63 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 BD65_1186 06905c4194097418db7e07861c4f4742 165 SMART SM00935 12 165 3.0E-56 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 BD65_1186 06905c4194097418db7e07861c4f4742 165 Gene3D G3DSA:3.30.910.20 21 165 3.6E-49 T 14-10-2018 IPR024930 Skp domain superfamily BD65_1186 06905c4194097418db7e07861c4f4742 165 SUPERFAMILY SSF111384 22 164 2.75E-39 T 14-10-2018 BD65_1048 e3a3e1c8844483cd69d7ee40821ebecf 409 Pfam PF00266 Aminotransferase class-V 10 373 7.0E-87 T 14-10-2018 IPR000192 Aminotransferase class V domain BD65_1048 e3a3e1c8844483cd69d7ee40821ebecf 409 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 6 409 1.0E-229 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 BD65_1048 e3a3e1c8844483cd69d7ee40821ebecf 409 Gene3D G3DSA:3.40.640.10 21 267 5.7E-167 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_1048 e3a3e1c8844483cd69d7ee40821ebecf 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 202 221 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BD65_1048 e3a3e1c8844483cd69d7ee40821ebecf 409 Gene3D G3DSA:3.90.1150.10 10 381 5.7E-167 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1048 e3a3e1c8844483cd69d7ee40821ebecf 409 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 6 400 54.245 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 BD65_1048 e3a3e1c8844483cd69d7ee40821ebecf 409 SUPERFAMILY SSF53383 8 395 3.64E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_1048 e3a3e1c8844483cd69d7ee40821ebecf 409 PIRSF PIRSF005572 7 389 2.6E-137 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BD65_796 7c242f47b2977d36e233f42ddeede4d3 597 PIRSF PIRSF004950 6 597 1.6E-232 T 14-10-2018 IPR012159 Inner membrane protein YejM BD65_796 7c242f47b2977d36e233f42ddeede4d3 597 SUPERFAMILY SSF53649 256 562 2.13E-48 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BD65_796 7c242f47b2977d36e233f42ddeede4d3 597 Gene3D G3DSA:3.40.720.10 248 543 3.1E-39 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BD65_796 7c242f47b2977d36e233f42ddeede4d3 597 Pfam PF00884 Sulfatase 261 511 4.9E-25 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BD65_796 7c242f47b2977d36e233f42ddeede4d3 597 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 1.5E-106 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal BD65_3084 97c8ae61d6d799b64d9878e9795f873b 159 Gene3D G3DSA:3.30.70.640 1 159 8.0E-71 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3084 97c8ae61d6d799b64d9878e9795f873b 159 Pfam PF01967 MoaC family 15 150 2.1E-54 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3084 97c8ae61d6d799b64d9878e9795f873b 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.38 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3084 97c8ae61d6d799b64d9878e9795f873b 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 5.5E-72 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3084 97c8ae61d6d799b64d9878e9795f873b 159 SUPERFAMILY SSF55040 11 155 5.1E-61 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_1966 8a2d52a8131031f20e90ed24693d6002 229 SUPERFAMILY SSF48008 107 225 1.05E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BD65_1966 8a2d52a8131031f20e90ed24693d6002 229 SMART SM00895 106 227 1.6E-20 T 14-10-2018 IPR011711 GntR, C-terminal BD65_1966 8a2d52a8131031f20e90ed24693d6002 229 SMART SM00345 18 77 8.9E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_1966 8a2d52a8131031f20e90ed24693d6002 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_1966 8a2d52a8131031f20e90ed24693d6002 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_1966 8a2d52a8131031f20e90ed24693d6002 229 Pfam PF07729 FCD domain 109 225 4.8E-24 T 14-10-2018 IPR011711 GntR, C-terminal BD65_1966 8a2d52a8131031f20e90ed24693d6002 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 77 1.4E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_1966 8a2d52a8131031f20e90ed24693d6002 229 Gene3D G3DSA:1.20.120.530 101 229 1.3E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BD65_1966 8a2d52a8131031f20e90ed24693d6002 229 SUPERFAMILY SSF46785 10 81 1.18E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1966 8a2d52a8131031f20e90ed24693d6002 229 Gene3D G3DSA:1.10.10.10 1 79 1.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 Gene3D G3DSA:1.10.10.250 73 141 6.7E-28 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 14-10-2018 BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.8E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 SUPERFAMILY SSF54747 3 73 2.22E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 Gene3D G3DSA:3.30.1550.10 2 72 1.7E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.2E-65 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.068 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 5.2E-25 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 SUPERFAMILY SSF46906 68 141 9.55E-27 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BD65_1655 308bf48e34857f3c6f4d4042ee0db84e 142 SMART SM00649 9 141 5.8E-86 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BD65_328 56ca5ac65530983c6425de3f817fab75 504 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 474 8.0E-138 T 14-10-2018 IPR010352 Protein of unknown function DUF945 BD65_2949 b7291ef1d76b890d1b5148fa825466d5 324 Pfam PF00072 Response regulator receiver domain 23 133 8.9E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2949 b7291ef1d76b890d1b5148fa825466d5 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 311 8.7E-51 T 14-10-2018 IPR000160 GGDEF domain BD65_2949 b7291ef1d76b890d1b5148fa825466d5 324 Gene3D G3DSA:3.30.70.270 140 314 4.6E-54 T 14-10-2018 BD65_2949 b7291ef1d76b890d1b5148fa825466d5 324 SMART SM00448 21 133 1.1E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2949 b7291ef1d76b890d1b5148fa825466d5 324 Gene3D G3DSA:3.40.50.2300 17 139 2.4E-38 T 14-10-2018 BD65_2949 b7291ef1d76b890d1b5148fa825466d5 324 SMART SM00267 139 315 6.5E-63 T 14-10-2018 IPR000160 GGDEF domain BD65_2949 b7291ef1d76b890d1b5148fa825466d5 324 SUPERFAMILY SSF55073 155 313 1.49E-45 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_2949 b7291ef1d76b890d1b5148fa825466d5 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 149 312 3.4E-51 T 14-10-2018 IPR000160 GGDEF domain BD65_2949 b7291ef1d76b890d1b5148fa825466d5 324 SUPERFAMILY SSF52172 20 153 2.42E-39 T 14-10-2018 IPR011006 CheY-like superfamily BD65_122 58ed1d70460da3a59c66fc61946ae5ec 345 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.3E-154 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 BD65_122 58ed1d70460da3a59c66fc61946ae5ec 345 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 344 72.715 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 BD65_122 58ed1d70460da3a59c66fc61946ae5ec 345 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 3.1E-141 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 BD65_122 58ed1d70460da3a59c66fc61946ae5ec 345 SUPERFAMILY SSF55729 1 338 2.42E-131 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_122 58ed1d70460da3a59c66fc61946ae5ec 345 Gene3D G3DSA:3.40.630.30 1 272 9.0E-121 T 14-10-2018 BD65_122 58ed1d70460da3a59c66fc61946ae5ec 345 Gene3D G3DSA:2.40.40.20 273 340 1.0E-8 T 14-10-2018 BD65_122 58ed1d70460da3a59c66fc61946ae5ec 345 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 1.2E-145 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 BD65_3086 f9eef6f1510201e08c64e5b419c93896 150 SUPERFAMILY SSF54690 5 150 4.05E-55 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BD65_3086 f9eef6f1510201e08c64e5b419c93896 150 Pfam PF02391 MoaE protein 10 121 1.8E-36 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BD65_3086 f9eef6f1510201e08c64e5b419c93896 150 Gene3D G3DSA:3.90.1170.40 1 150 4.2E-56 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BD65_829 a01ced6cb06f2721afcb06626da42173 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BD65_829 a01ced6cb06f2721afcb06626da42173 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.852 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 BD65_829 a01ced6cb06f2721afcb06626da42173 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 1.5E-80 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BD65_829 a01ced6cb06f2721afcb06626da42173 285 Gene3D G3DSA:1.10.12.10 223 273 3.5E-31 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BD65_829 a01ced6cb06f2721afcb06626da42173 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 3.0E-150 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 BD65_829 a01ced6cb06f2721afcb06626da42173 285 SUPERFAMILY SSF52096 18 280 1.42E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_829 a01ced6cb06f2721afcb06626da42173 285 Gene3D G3DSA:3.90.226.10 1 222 9.2E-88 T 14-10-2018 BD65_1957 6fef16cece192c184c5a8428deedab4b 207 SUPERFAMILY SSF52833 20 204 2.09E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1957 6fef16cece192c184c5a8428deedab4b 207 Gene3D G3DSA:3.40.30.10 25 207 3.0E-54 T 14-10-2018 BD65_1957 6fef16cece192c184c5a8428deedab4b 207 PIRSF PIRSF001488 1 207 1.4E-86 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BD65_1957 6fef16cece192c184c5a8428deedab4b 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BD65_1957 6fef16cece192c184c5a8428deedab4b 207 Pfam PF01323 DSBA-like thioredoxin domain 40 187 4.7E-28 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 PRINTS PR00471 Acetate kinase family signature 318 334 3.7E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 PRINTS PR00471 Acetate kinase family signature 7 18 3.7E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 PRINTS PR00471 Acetate kinase family signature 374 386 3.7E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 PRINTS PR00471 Acetate kinase family signature 169 182 3.7E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 PRINTS PR00471 Acetate kinase family signature 199 220 3.7E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 PRINTS PR00471 Acetate kinase family signature 296 309 3.7E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 SUPERFAMILY SSF53067 153 392 1.3E-83 T 14-10-2018 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 TIGRFAM TIGR00016 ackA: acetate kinase 6 393 1.1E-153 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 71.983 T 14-10-2018 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 Gene3D G3DSA:3.30.420.40 4 191 2.3E-70 T 14-10-2018 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 Pfam PF00871 Acetokinase family 7 386 2.3E-149 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 Gene3D G3DSA:3.30.420.40 192 402 8.6E-79 T 14-10-2018 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 Hamap MF_00020 Acetate kinase [ackA]. 1 396 163.442 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 PIRSF PIRSF000722 3 397 1.7E-135 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BD65_1333 545f71033f2bb2e57d3c52faec3775a6 406 SUPERFAMILY SSF53067 6 191 1.55E-62 T 14-10-2018 BD65_399 f3caafc1893f24a5e771428a2fbcca09 148 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 15 148 2.4E-53 T 14-10-2018 IPR011979 Conserved hypothetical protein CHP02293 BD65_399 f3caafc1893f24a5e771428a2fbcca09 148 Pfam PF09722 Protein of unknown function (DUF2384) 94 145 1.9E-14 T 14-10-2018 IPR024467 Domain of unknown function DUF2384 BD65_545 61138adf6ec2cd2f06cf7b32c6f7e211 316 PIRSF PIRSF006431 3 316 5.5E-138 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 BD65_545 61138adf6ec2cd2f06cf7b32c6f7e211 316 SUPERFAMILY SSF53474 7 308 1.13E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_545 61138adf6ec2cd2f06cf7b32c6f7e211 316 Gene3D G3DSA:3.40.50.1820 1 316 2.5E-111 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_545 61138adf6ec2cd2f06cf7b32c6f7e211 316 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 12 313 1.4E-123 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 BD65_545 61138adf6ec2cd2f06cf7b32c6f7e211 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 5.7E-14 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BD65_545 61138adf6ec2cd2f06cf7b32c6f7e211 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 5.7E-14 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BD65_545 61138adf6ec2cd2f06cf7b32c6f7e211 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 5.7E-14 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BD65_545 61138adf6ec2cd2f06cf7b32c6f7e211 316 Pfam PF00561 alpha/beta hydrolase fold 41 297 4.8E-31 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BD65_284 93195cfdb97597b93f5512801a490e34 332 Gene3D G3DSA:3.40.1030.10 67 321 1.4E-122 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_284 93195cfdb97597b93f5512801a490e34 332 Gene3D G3DSA:1.20.970.10 11 183 1.4E-122 T 14-10-2018 BD65_284 93195cfdb97597b93f5512801a490e34 332 Pfam PF00591 Glycosyl transferase family, a/b domain 73 321 7.2E-100 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_284 93195cfdb97597b93f5512801a490e34 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 62 4.1E-13 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_284 93195cfdb97597b93f5512801a490e34 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.12 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BD65_284 93195cfdb97597b93f5512801a490e34 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 329 1.1E-126 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BD65_284 93195cfdb97597b93f5512801a490e34 332 SUPERFAMILY SSF47648 1 67 1.96E-15 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_284 93195cfdb97597b93f5512801a490e34 332 SUPERFAMILY SSF52418 70 328 6.41E-93 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2413 62b51e9200220324c0f84b3bb1456873 102 Pfam PF01527 Transposase 2 74 1.2E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_2413 62b51e9200220324c0f84b3bb1456873 102 Gene3D G3DSA:1.10.10.60 7 88 1.2E-9 T 14-10-2018 BD65_2413 62b51e9200220324c0f84b3bb1456873 102 SUPERFAMILY SSF46689 1 93 7.7E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1166 b20d79d99ce500f549e9cc897f640664 235 SUPERFAMILY SSF118196 1 230 4.58E-84 T 14-10-2018 IPR036413 YaeB-like superfamily BD65_1166 b20d79d99ce500f549e9cc897f640664 235 Gene3D G3DSA:3.30.2310.10 148 231 4.6E-22 T 14-10-2018 BD65_1166 b20d79d99ce500f549e9cc897f640664 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 149 1.2E-56 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain BD65_1166 b20d79d99ce500f549e9cc897f640664 235 Gene3D G3DSA:2.40.30.70 25 147 2.4E-47 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily BD65_1166 b20d79d99ce500f549e9cc897f640664 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site BD65_1166 b20d79d99ce500f549e9cc897f640664 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 1.2E-38 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain BD65_257 12048420580479e0e3fece80cc1d0b5e 333 SUPERFAMILY SSF52540 22 263 4.33E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_257 12048420580479e0e3fece80cc1d0b5e 333 Gene3D G3DSA:3.40.50.300 8 332 4.9E-97 T 14-10-2018 BD65_257 12048420580479e0e3fece80cc1d0b5e 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.1E-28 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_257 12048420580479e0e3fece80cc1d0b5e 333 Pfam PF00005 ABC transporter 40 191 1.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_257 12048420580479e0e3fece80cc1d0b5e 333 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_257 12048420580479e0e3fece80cc1d0b5e 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 2.6E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_257 12048420580479e0e3fece80cc1d0b5e 333 SMART SM00382 48 241 1.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2288 82b7a61939c30545301900e3882b1eb2 385 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 199 210 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_2288 82b7a61939c30545301900e3882b1eb2 385 Pfam PF13484 4Fe-4S double cluster binding domain 198 262 1.8E-18 T 14-10-2018 BD65_2288 82b7a61939c30545301900e3882b1eb2 385 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 321 51.298 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BD65_2288 82b7a61939c30545301900e3882b1eb2 385 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 354 1.1E-149 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BD65_2288 82b7a61939c30545301900e3882b1eb2 385 Pfam PF08331 Domain of unknown function (DUF1730) 62 146 7.5E-23 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 BD65_2288 82b7a61939c30545301900e3882b1eb2 385 SUPERFAMILY SSF46548 145 262 3.19E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 PIRSF PIRSF000532 1 328 2.6E-121 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 SUPERFAMILY SSF53784 3 316 3.66E-107 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 1.2E-118 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 328 44.511 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 9.8E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 9.8E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 9.8E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 9.8E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 9.8E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 9.8E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 9.8E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 9.8E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 9.8E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 Gene3D G3DSA:3.40.50.450 4 280 2.0E-113 T 14-10-2018 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 Pfam PF00365 Phosphofructokinase 4 277 5.4E-107 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BD65_1855 16b0e1f9b2661b610ae14f39506113c7 328 Gene3D G3DSA:3.40.50.460 144 253 2.0E-113 T 14-10-2018 BD65_1973 83213c0d479897d51ab6f7bddbd5e0a0 622 Pfam PF02705 K+ potassium transporter 14 544 6.4E-209 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 BD65_1973 83213c0d479897d51ab6f7bddbd5e0a0 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.69 T 14-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup BD65_1973 83213c0d479897d51ab6f7bddbd5e0a0 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 549 1.0E-184 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 SUPERFAMILY SSF55874 287 451 7.6E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 Pfam PF00672 HAMP domain 181 229 6.6E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 Gene3D G3DSA:3.30.565.10 303 457 5.3E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 297 9.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 SUPERFAMILY SSF47384 217 298 1.0E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 SMART SM00387 343 455 7.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 SUPERFAMILY SSF158472 181 229 4.84E-10 T 14-10-2018 BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 449 1.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 Gene3D G3DSA:1.10.287.130 178 293 3.7E-28 T 14-10-2018 BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 SMART SM00388 234 298 5.7E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_1015 c526e8ff3f53669d5ea3c502e35d3fb7 459 SMART SM00304 181 233 1.1E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2326 bd552a667f1335d6ffadc528c65078a9 1276 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 940 1276 1.5E-64 T 14-10-2018 IPR007452 Translocation and assembly module TamB BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 SUPERFAMILY SSF46894 829 895 2.18E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 2.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 2.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 2.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 SUPERFAMILY SSF48452 442 806 1.06E-157 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 Gene3D G3DSA:1.25.40.10 439 811 1.6E-96 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 Gene3D G3DSA:1.10.10.10 828 900 1.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 SUPERFAMILY SSF52540 7 226 9.23E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 SMART SM00421 836 893 7.9E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.838 T 14-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT BD65_2126 f9a990f852cda2abf4d17be4b2c76389 904 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 891 2.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_1897 289619597a09c6fd869f01047724ec98 91 Gene3D G3DSA:1.10.260.40 1 91 3.6E-36 T 14-10-2018 BD65_1897 289619597a09c6fd869f01047724ec98 91 Pfam PF01381 Helix-turn-helix 7 50 5.0E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BD65_1897 289619597a09c6fd869f01047724ec98 91 SUPERFAMILY SSF47413 1 54 1.15E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_1897 289619597a09c6fd869f01047724ec98 91 SMART SM00530 6 63 2.9E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BD65_759 85cb6a5e40608d2b3bc41ffd11123c21 658 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 156 1.7E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BD65_759 85cb6a5e40608d2b3bc41ffd11123c21 658 Pfam PF00593 TonB dependent receptor 223 656 5.1E-60 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BD65_759 85cb6a5e40608d2b3bc41ffd11123c21 658 SUPERFAMILY SSF56935 33 658 6.51E-125 T 14-10-2018 BD65_759 85cb6a5e40608d2b3bc41ffd11123c21 658 Gene3D G3DSA:2.40.170.20 167 658 1.4E-139 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BD65_759 85cb6a5e40608d2b3bc41ffd11123c21 658 Gene3D G3DSA:2.170.130.10 31 161 9.6E-40 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BD65_759 85cb6a5e40608d2b3bc41ffd11123c21 658 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 14-10-2018 IPR010916 TonB box, conserved site BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 SUPERFAMILY SSF47928 3 104 3.01E-26 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 1.7E-49 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.705 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 Gene3D G3DSA:1.10.520.20 2 106 9.3E-37 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 6.1E-62 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.8E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.8E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.8E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.8E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1986 db3b73667296d9f3cef5f1dfddafc2fb 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.8E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_274 ccba55fa2140165d8cf9acfd7e264412 141 Pfam PF03061 Thioesterase superfamily 25 96 8.2E-20 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BD65_274 ccba55fa2140165d8cf9acfd7e264412 141 SUPERFAMILY SSF54637 6 130 4.55E-41 T 14-10-2018 IPR029069 HotDog domain superfamily BD65_274 ccba55fa2140165d8cf9acfd7e264412 141 Gene3D G3DSA:3.10.129.10 1 137 3.1E-45 T 14-10-2018 BD65_1599 2bf2705055f8b14e5b590aded1b4673c 1630 Gene3D G3DSA:2.160.20.10 37 324 1.3E-79 T 14-10-2018 IPR012334 Pectin lyase fold BD65_1599 2bf2705055f8b14e5b590aded1b4673c 1630 SUPERFAMILY SSF51126 40 316 5.96E-55 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor BD65_1599 2bf2705055f8b14e5b590aded1b4673c 1630 Pfam PF13332 Haemagluttinin repeat 405 545 2.1E-11 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_1599 2bf2705055f8b14e5b590aded1b4673c 1630 Pfam PF13332 Haemagluttinin repeat 936 1098 1.3E-12 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_1599 2bf2705055f8b14e5b590aded1b4673c 1630 Pfam PF13332 Haemagluttinin repeat 637 793 6.2E-11 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_1599 2bf2705055f8b14e5b590aded1b4673c 1630 Pfam PF13332 Haemagluttinin repeat 817 901 6.6E-6 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_1599 2bf2705055f8b14e5b590aded1b4673c 1630 Pfam PF13332 Haemagluttinin repeat 1225 1389 3.5E-24 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_1599 2bf2705055f8b14e5b590aded1b4673c 1630 SMART SM00912 49 169 8.8E-45 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_1599 2bf2705055f8b14e5b590aded1b4673c 1630 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 67 160 1.3E-15 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_1599 2bf2705055f8b14e5b590aded1b4673c 1630 Pfam PF05860 haemagglutination activity domain 44 167 3.2E-29 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_1267 65f3cf098eb0fa456137e60593b44595 172 PIRSF PIRSF038996 1 170 6.1E-53 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 BD65_1267 65f3cf098eb0fa456137e60593b44595 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 1.4E-69 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 BD65_1267 65f3cf098eb0fa456137e60593b44595 172 SUPERFAMILY SSF52218 1 166 1.09E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_1267 65f3cf098eb0fa456137e60593b44595 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 BD65_1267 65f3cf098eb0fa456137e60593b44595 172 Pfam PF00258 Flavodoxin 5 160 1.2E-24 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BD65_1267 65f3cf098eb0fa456137e60593b44595 172 Gene3D G3DSA:3.40.50.360 1 171 2.1E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_2909 d762ad84bf1e3b850a627b00c3dadba6 177 Pfam PF00419 Fimbrial protein 34 177 1.1E-15 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 BD65_2909 d762ad84bf1e3b850a627b00c3dadba6 177 Gene3D G3DSA:2.60.40.1090 44 177 4.1E-38 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 BD65_2909 d762ad84bf1e3b850a627b00c3dadba6 177 SUPERFAMILY SSF49401 32 177 2.88E-40 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_2098 3e43e50bf1ef91295bad19e15ef26e51 396 PIRSF PIRSF001434 1 394 8.0E-114 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_2098 3e43e50bf1ef91295bad19e15ef26e51 396 SUPERFAMILY SSF53383 30 393 1.44E-85 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_2098 3e43e50bf1ef91295bad19e15ef26e51 396 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_2098 3e43e50bf1ef91295bad19e15ef26e51 396 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 393 9.1E-175 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 BD65_2098 3e43e50bf1ef91295bad19e15ef26e51 396 Gene3D G3DSA:3.40.640.10 1 258 7.2E-67 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_2098 3e43e50bf1ef91295bad19e15ef26e51 396 Gene3D G3DSA:3.90.1150.10 259 395 2.2E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_2098 3e43e50bf1ef91295bad19e15ef26e51 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 8.6E-114 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_446 f483ae4c481d98359289e1f06651fe1b 221 Gene3D G3DSA:2.40.30.20 1 89 2.7E-31 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_446 f483ae4c481d98359289e1f06651fe1b 221 SUPERFAMILY SSF63380 93 199 5.95E-32 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BD65_446 f483ae4c481d98359289e1f06651fe1b 221 SUPERFAMILY SSF63380 1 93 6.72E-28 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BD65_446 f483ae4c481d98359289e1f06651fe1b 221 Gene3D G3DSA:2.40.30.20 94 191 1.6E-29 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_446 f483ae4c481d98359289e1f06651fe1b 221 Pfam PF00677 Lumazine binding domain 3 87 6.0E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_446 f483ae4c481d98359289e1f06651fe1b 221 Pfam PF00677 Lumazine binding domain 100 185 9.3E-22 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_446 f483ae4c481d98359289e1f06651fe1b 221 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 2.5E-83 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_446 f483ae4c481d98359289e1f06651fe1b 221 PIRSF PIRSF000498 1 208 1.2E-73 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BD65_2738 67ba266915eb9215a542dd32f13de869 857 Gene3D G3DSA:3.40.50.300 148 342 1.0E-73 T 14-10-2018 BD65_2738 67ba266915eb9215a542dd32f13de869 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 BD65_2738 67ba266915eb9215a542dd32f13de869 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 8.0E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_2738 67ba266915eb9215a542dd32f13de869 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 2.1E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BD65_2738 67ba266915eb9215a542dd32f13de869 857 Gene3D G3DSA:3.40.50.300 343 544 2.2E-70 T 14-10-2018 BD65_2738 67ba266915eb9215a542dd32f13de869 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_2738 67ba266915eb9215a542dd32f13de869 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_2738 67ba266915eb9215a542dd32f13de869 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_2738 67ba266915eb9215a542dd32f13de869 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BD65_2738 67ba266915eb9215a542dd32f13de869 857 Gene3D G3DSA:3.40.50.300 550 764 1.6E-91 T 14-10-2018 BD65_2738 67ba266915eb9215a542dd32f13de869 857 Gene3D G3DSA:1.10.1780.10 1 147 6.6E-36 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BD65_2738 67ba266915eb9215a542dd32f13de869 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 5.6E-15 T 14-10-2018 IPR004176 Clp, N-terminal BD65_2738 67ba266915eb9215a542dd32f13de869 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 6.3E-11 T 14-10-2018 IPR004176 Clp, N-terminal BD65_2738 67ba266915eb9215a542dd32f13de869 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 3.7E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BD65_2738 67ba266915eb9215a542dd32f13de869 857 SMART SM01086 766 855 9.0E-38 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BD65_2738 67ba266915eb9215a542dd32f13de869 857 SUPERFAMILY SSF52540 546 852 5.89E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2738 67ba266915eb9215a542dd32f13de869 857 SMART SM00382 198 344 6.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2738 67ba266915eb9215a542dd32f13de869 857 SMART SM00382 597 739 4.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2738 67ba266915eb9215a542dd32f13de869 857 SUPERFAMILY SSF81923 4 156 7.75E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BD65_2738 67ba266915eb9215a542dd32f13de869 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BD65_2738 67ba266915eb9215a542dd32f13de869 857 Gene3D G3DSA:1.10.8.60 766 857 9.1E-26 T 14-10-2018 BD65_2738 67ba266915eb9215a542dd32f13de869 857 SUPERFAMILY SSF52540 159 545 1.6E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2738 67ba266915eb9215a542dd32f13de869 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 BD65_1234 3e8087e79c6ca167cf0bdea2098ba22f 718 SMART SM00563 30 140 2.5E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BD65_1234 3e8087e79c6ca167cf0bdea2098ba22f 718 Gene3D G3DSA:3.40.50.12780 195 614 4.3E-79 T 14-10-2018 BD65_1234 3e8087e79c6ca167cf0bdea2098ba22f 718 Gene3D G3DSA:3.30.300.30 616 714 6.5E-10 T 14-10-2018 BD65_1234 3e8087e79c6ca167cf0bdea2098ba22f 718 SUPERFAMILY SSF69593 8 166 3.92E-19 T 14-10-2018 BD65_1234 3e8087e79c6ca167cf0bdea2098ba22f 718 Pfam PF13193 AMP-binding enzyme C-terminal domain 629 701 1.2E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BD65_1234 3e8087e79c6ca167cf0bdea2098ba22f 718 Pfam PF01553 Acyltransferase 27 137 1.2E-16 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BD65_1234 3e8087e79c6ca167cf0bdea2098ba22f 718 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 55.164 T 14-10-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 BD65_1234 3e8087e79c6ca167cf0bdea2098ba22f 718 SUPERFAMILY SSF56801 205 712 1.44E-100 T 14-10-2018 BD65_1234 3e8087e79c6ca167cf0bdea2098ba22f 718 Pfam PF00501 AMP-binding enzyme 229 619 6.3E-68 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_1234 3e8087e79c6ca167cf0bdea2098ba22f 718 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_2750 f480b80d75cbe7390357b3e301e0f8f4 239 Gene3D G3DSA:3.40.50.150 53 183 4.0E-12 T 14-10-2018 BD65_2750 f480b80d75cbe7390357b3e301e0f8f4 239 Pfam PF08241 Methyltransferase domain 77 125 1.1E-8 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BD65_2750 f480b80d75cbe7390357b3e301e0f8f4 239 SUPERFAMILY SSF53335 78 185 6.58E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_873 3d79932cbbaf43656367d7a04a55d9e7 241 Gene3D G3DSA:3.30.70.1070 156 235 2.6E-6 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BD65_873 3d79932cbbaf43656367d7a04a55d9e7 241 SUPERFAMILY SSF110997 161 234 1.03E-12 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BD65_873 3d79932cbbaf43656367d7a04a55d9e7 241 Hamap MF_02022 Cell division protein DedD [dedD]. 14 239 25.551 T 14-10-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 BD65_873 3d79932cbbaf43656367d7a04a55d9e7 241 Pfam PF05036 Sporulation related domain 161 234 1.5E-10 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 BD65_2795 82332e8c22fcf8667cdd59f42403eed1 609 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 5 101 1.3E-7 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 BD65_2795 82332e8c22fcf8667cdd59f42403eed1 609 Gene3D G3DSA:3.20.20.80 112 520 5.9E-127 T 14-10-2018 BD65_2795 82332e8c22fcf8667cdd59f42403eed1 609 SUPERFAMILY SSF51445 113 527 1.73E-92 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_2795 82332e8c22fcf8667cdd59f42403eed1 609 PIRSF PIRSF036918 1 606 1.1E-234 T 14-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 BD65_2795 82332e8c22fcf8667cdd59f42403eed1 609 Pfam PF00128 Alpha amylase, catalytic domain 174 490 5.2E-75 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BD65_2795 82332e8c22fcf8667cdd59f42403eed1 609 SUPERFAMILY SSF51011 527 604 9.36E-7 T 14-10-2018 BD65_2795 82332e8c22fcf8667cdd59f42403eed1 609 SMART SM00642 124 518 1.7E-77 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BD65_2795 82332e8c22fcf8667cdd59f42403eed1 609 Gene3D G3DSA:2.60.40.1180 522 605 2.2E-7 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BD65_2051 5b9c72b50dd2d5a44e5d00572b0790b0 803 SUPERFAMILY SSF53706 1 638 1.16E-235 T 14-10-2018 BD65_2051 5b9c72b50dd2d5a44e5d00572b0790b0 803 SUPERFAMILY SSF50692 617 803 1.16E-43 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BD65_2051 5b9c72b50dd2d5a44e5d00572b0790b0 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 4.6E-17 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BD65_2051 5b9c72b50dd2d5a44e5d00572b0790b0 803 Gene3D G3DSA:3.40.50.740 292 472 4.8E-59 T 14-10-2018 BD65_2051 5b9c72b50dd2d5a44e5d00572b0790b0 803 Gene3D G3DSA:3.40.228.10 535 627 2.7E-29 T 14-10-2018 BD65_2051 5b9c72b50dd2d5a44e5d00572b0790b0 803 Pfam PF00384 Molybdopterin oxidoreductase 2 380 7.3E-25 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_2051 5b9c72b50dd2d5a44e5d00572b0790b0 803 Gene3D G3DSA:2.40.40.20 628 803 6.4E-75 T 14-10-2018 BD65_2051 5b9c72b50dd2d5a44e5d00572b0790b0 803 Gene3D G3DSA:3.40.228.10 1 265 9.0E-74 T 14-10-2018 BD65_2051 5b9c72b50dd2d5a44e5d00572b0790b0 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BD65_2051 5b9c72b50dd2d5a44e5d00572b0790b0 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 14-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 BD65_2993 8fb1905f6fbe1375179653ecd8b5d9e2 250 Pfam PF13242 HAD-hyrolase-like 174 246 1.0E-19 T 14-10-2018 BD65_2993 8fb1905f6fbe1375179653ecd8b5d9e2 250 Gene3D G3DSA:3.40.50.1000 6 232 2.1E-84 T 14-10-2018 IPR023214 HAD superfamily BD65_2993 8fb1905f6fbe1375179653ecd8b5d9e2 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 1.0E-61 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA BD65_2993 8fb1905f6fbe1375179653ecd8b5d9e2 250 SUPERFAMILY SSF56784 1 247 2.84E-64 T 14-10-2018 IPR036412 HAD-like superfamily BD65_2993 8fb1905f6fbe1375179653ecd8b5d9e2 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.2E-23 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA BD65_2993 8fb1905f6fbe1375179653ecd8b5d9e2 250 Gene3D G3DSA:3.40.50.1000 71 174 2.1E-84 T 14-10-2018 IPR023214 HAD superfamily BD65_1649 20de57fc144eaa3e06b475564c8375fb 291 SUPERFAMILY SSF51695 5 287 1.99E-51 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_1649 20de57fc144eaa3e06b475564c8375fb 291 Gene3D G3DSA:3.20.20.190 2 290 4.8E-78 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_1649 20de57fc144eaa3e06b475564c8375fb 291 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 22 157 4.2E-9 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain BD65_1649 20de57fc144eaa3e06b475564c8375fb 291 SMART SM00148 12 157 1.0E-8 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain BD65_1488 7a7c40fc2eec5ab9418481f24d9b3dd1 300 Pfam PF04055 Radical SAM superfamily 43 194 1.2E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_1488 7a7c40fc2eec5ab9418481f24d9b3dd1 300 SUPERFAMILY SSF102114 13 262 5.76E-46 T 14-10-2018 BD65_1488 7a7c40fc2eec5ab9418481f24d9b3dd1 300 Pfam PF16199 Radical_SAM C-terminal domain 208 284 2.4E-18 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 BD65_1488 7a7c40fc2eec5ab9418481f24d9b3dd1 300 SMART SM00729 23 247 2.0E-42 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BD65_1488 7a7c40fc2eec5ab9418481f24d9b3dd1 300 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 294 2.2E-130 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 BD65_1488 7a7c40fc2eec5ab9418481f24d9b3dd1 300 Gene3D G3DSA:3.80.30.20 41 238 1.3E-18 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BD65_1496 9d8910f92fc9ba37793e86f5d249bf6c 130 SUPERFAMILY SSF54211 5 130 2.62E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_1496 9d8910f92fc9ba37793e86f5d249bf6c 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.962 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid BD65_1496 9d8910f92fc9ba37793e86f5d249bf6c 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 BD65_1496 9d8910f92fc9ba37793e86f5d249bf6c 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 4.1E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 BD65_1496 9d8910f92fc9ba37793e86f5d249bf6c 130 Gene3D G3DSA:3.30.230.10 1 130 4.5E-54 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_2769 ff43ac750484a346727d3c82ba33ce07 152 Gene3D G3DSA:3.40.50.2020 1 152 2.5E-43 T 14-10-2018 BD65_2769 ff43ac750484a346727d3c82ba33ce07 152 SUPERFAMILY SSF53271 4 146 1.84E-31 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BD65_2769 ff43ac750484a346727d3c82ba33ce07 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.851 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 BD65_2769 ff43ac750484a346727d3c82ba33ce07 152 Pfam PF00156 Phosphoribosyl transferase domain 13 145 1.6E-15 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BD65_2053 b1f92343772123e3bb82f94f77fce979 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 205 3.1E-67 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 BD65_2053 b1f92343772123e3bb82f94f77fce979 211 SUPERFAMILY SSF81342 4 209 6.12E-55 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BD65_2053 b1f92343772123e3bb82f94f77fce979 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 4.1E-22 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BD65_2053 b1f92343772123e3bb82f94f77fce979 211 Gene3D G3DSA:1.20.950.20 1 211 2.2E-72 T 14-10-2018 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 SUPERFAMILY SSF55307 203 319 2.98E-42 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 SMART SM00865 206 324 8.3E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 1.4E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 1.4E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 1.4E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 1.4E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 2.0E-41 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 SMART SM00864 12 204 6.1E-112 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 SUPERFAMILY SSF52490 12 207 1.44E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 5.7E-37 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal BD65_2561 04540c7864443c75f6079c38d79e40d6 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.078 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 337 8.9E-142 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 Gene3D G3DSA:3.40.50.1440 9 316 1.9E-116 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BD65_2561 04540c7864443c75f6079c38d79e40d6 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 Gene3D G3DSA:3.30.565.10 514 672 3.7E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 Gene3D G3DSA:1.10.287.130 425 511 3.0E-23 T 14-10-2018 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 1 919 27.358 T 14-10-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 610 8.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 649 8.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 624 8.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 668 8.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 688 777 2.8E-29 T 14-10-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 SUPERFAMILY SSF47384 432 514 1.33E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 SUPERFAMILY SSF52172 801 922 3.7E-39 T 14-10-2018 IPR011006 CheY-like superfamily BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 Gene3D G3DSA:3.40.50.2300 797 925 1.4E-39 T 14-10-2018 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 SMART SM00448 803 914 4.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 SMART SM00387 560 671 5.5E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 Pfam PF00072 Response regulator receiver domain 805 914 2.3E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 512 1.6E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 Gene3D G3DSA:3.40.50.10970 686 796 6.7E-15 T 14-10-2018 IPR038388 RcsC, C-terminal domain superfamily BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 SUPERFAMILY SSF55874 502 670 2.23E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 560 670 8.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 SMART SM00388 448 513 5.1E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_812 bb0a9fb5253c3d547df7664dee18125e 925 SUPERFAMILY SSF52172 682 779 1.54E-32 T 14-10-2018 IPR011006 CheY-like superfamily BD65_572 db0ca4fdf227f23383034a1bcda4107a 539 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 104 127 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BD65_572 db0ca4fdf227f23383034a1bcda4107a 539 Gene3D G3DSA:3.30.410.40 172 472 6.4E-145 T 14-10-2018 BD65_572 db0ca4fdf227f23383034a1bcda4107a 539 Pfam PF05199 GMC oxidoreductase 391 530 4.3E-26 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 BD65_572 db0ca4fdf227f23383034a1bcda4107a 539 SUPERFAMILY SSF51905 9 537 9.3E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_572 db0ca4fdf227f23383034a1bcda4107a 539 PIRSF PIRSF000137 359 538 1.8E-26 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BD65_572 db0ca4fdf227f23383034a1bcda4107a 539 PIRSF PIRSF000137 5 368 5.2E-76 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BD65_572 db0ca4fdf227f23383034a1bcda4107a 539 Pfam PF00732 GMC oxidoreductase 10 320 3.0E-62 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BD65_572 db0ca4fdf227f23383034a1bcda4107a 539 Gene3D G3DSA:3.50.50.60 10 532 6.4E-145 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_572 db0ca4fdf227f23383034a1bcda4107a 539 SUPERFAMILY SSF54373 360 478 1.05E-13 T 14-10-2018 BD65_1747 1a5a63dd22cd0ea2d47545f33e370b71 406 PIRSF PIRSF033271 1 403 5.0E-192 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 BD65_1747 1a5a63dd22cd0ea2d47545f33e370b71 406 Gene3D G3DSA:3.40.50.12030 183 402 2.2E-85 T 14-10-2018 BD65_1747 1a5a63dd22cd0ea2d47545f33e370b71 406 Pfam PF06792 Uncharacterised protein family (UPF0261) 5 400 1.2E-158 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 BD65_1747 1a5a63dd22cd0ea2d47545f33e370b71 406 Gene3D G3DSA:3.40.50.12020 1 176 7.5E-58 T 14-10-2018 BD65_1747 1a5a63dd22cd0ea2d47545f33e370b71 406 Hamap MF_00677 UPF0261 protein . 2 402 51.271 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 BD65_1540 44eb24e12a59e79977e068f48960e48c 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1540 44eb24e12a59e79977e068f48960e48c 303 Gene3D G3DSA:1.10.10.10 3 88 2.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1540 44eb24e12a59e79977e068f48960e48c 303 Gene3D G3DSA:3.40.190.290 91 293 6.7E-54 T 14-10-2018 BD65_1540 44eb24e12a59e79977e068f48960e48c 303 Pfam PF03466 LysR substrate binding domain 89 292 2.5E-40 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1540 44eb24e12a59e79977e068f48960e48c 303 SUPERFAMILY SSF46785 4 109 9.68E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1540 44eb24e12a59e79977e068f48960e48c 303 SUPERFAMILY SSF53850 90 295 5.12E-42 T 14-10-2018 BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 SUPERFAMILY SSF49493 128 223 1.44E-17 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 Pfam PF00226 DnaJ domain 5 66 1.9E-23 T 14-10-2018 IPR001623 DnaJ domain BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 SUPERFAMILY SSF49493 217 296 1.18E-17 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 SUPERFAMILY SSF46565 1 103 7.07E-26 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 Pfam PF01556 DnaJ C terminal domain 133 289 4.1E-33 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 Gene3D G3DSA:2.60.260.20 213 288 2.7E-29 T 14-10-2018 BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 Gene3D G3DSA:1.20.5.460 289 316 5.9E-7 T 14-10-2018 BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 SMART SM00271 4 61 6.7E-26 T 14-10-2018 IPR001623 DnaJ domain BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 Gene3D G3DSA:2.60.260.20 128 212 9.0E-21 T 14-10-2018 BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 PRINTS PR00625 DnaJ domain signature 7 25 1.3E-21 T 14-10-2018 IPR001623 DnaJ domain BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 PRINTS PR00625 DnaJ domain signature 25 40 1.3E-21 T 14-10-2018 IPR001623 DnaJ domain BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 PRINTS PR00625 DnaJ domain signature 41 61 1.3E-21 T 14-10-2018 IPR001623 DnaJ domain BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 PRINTS PR00625 DnaJ domain signature 80 99 1.3E-21 T 14-10-2018 IPR001623 DnaJ domain BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 14-10-2018 IPR018253 DnaJ domain, conserved site BD65_418 39c790ebe2b3a02ae16735b7fafa9326 316 Gene3D G3DSA:1.10.287.110 2 122 9.9E-32 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BD65_868 aa9c9148be6f1cfb90a905166cd5e42c 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 9.6E-21 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BD65_868 aa9c9148be6f1cfb90a905166cd5e42c 228 Gene3D G3DSA:1.10.3720.10 1 223 4.1E-50 T 14-10-2018 IPR035906 MetI-like superfamily BD65_868 aa9c9148be6f1cfb90a905166cd5e42c 228 SUPERFAMILY SSF161098 8 205 1.57E-38 T 14-10-2018 IPR035906 MetI-like superfamily BD65_868 aa9c9148be6f1cfb90a905166cd5e42c 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 2.4E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1769 e9c9ae0c74c31db6131c686c3ec03a84 361 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 361 67.767 T 14-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 BD65_1769 e9c9ae0c74c31db6131c686c3ec03a84 361 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 356 2.0E-180 T 14-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 BD65_2874 4bf41308f5698a3c68cddc96d7db2609 384 Gene3D G3DSA:1.10.287.210 210 320 8.4E-88 T 14-10-2018 BD65_2874 4bf41308f5698a3c68cddc96d7db2609 384 Gene3D G3DSA:3.30.1890.10 67 333 8.4E-88 T 14-10-2018 BD65_2874 4bf41308f5698a3c68cddc96d7db2609 384 SUPERFAMILY SSF160355 67 333 7.32E-77 T 14-10-2018 BD65_2874 4bf41308f5698a3c68cddc96d7db2609 384 Pfam PF02706 Chain length determinant protein 28 126 2.6E-15 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 Gene3D G3DSA:1.10.275.10 5 138 1.2E-54 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 90.648 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 Pfam PF10415 Fumarase C C-terminus 408 461 2.8E-26 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 Gene3D G3DSA:1.10.40.30 408 465 8.2E-31 T 14-10-2018 BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 Pfam PF00206 Lyase 12 342 1.9E-118 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 7.3E-244 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 2.7E-33 T 14-10-2018 IPR000362 Fumarate lyase family BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 2.7E-33 T 14-10-2018 IPR000362 Fumarate lyase family BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 2.7E-33 T 14-10-2018 IPR000362 Fumarate lyase family BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 2.7E-33 T 14-10-2018 IPR000362 Fumarate lyase family BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 SUPERFAMILY SSF48557 5 459 4.24E-158 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.1E-5 T 14-10-2018 BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.1E-5 T 14-10-2018 BD65_331 2bd59b164d6cf350b7f8edc6f483735f 465 Gene3D G3DSA:1.20.200.10 139 407 1.0E-120 T 14-10-2018 BD65_1251 c15d948cc05a15d467503e9f0bd03e37 491 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 304 318 - T 14-10-2018 IPR001482 Type II/IV secretion system protein BD65_1251 c15d948cc05a15d467503e9f0bd03e37 491 SUPERFAMILY SSF52540 90 483 2.31E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1251 c15d948cc05a15d467503e9f0bd03e37 491 Pfam PF00437 Type II/IV secretion system protein 111 376 1.5E-87 T 14-10-2018 IPR001482 Type II/IV secretion system protein BD65_1251 c15d948cc05a15d467503e9f0bd03e37 491 Gene3D G3DSA:3.30.300.160 1 76 3.4E-9 T 14-10-2018 BD65_1251 c15d948cc05a15d467503e9f0bd03e37 491 Gene3D G3DSA:3.30.450.90 77 209 3.2E-50 T 14-10-2018 BD65_1251 c15d948cc05a15d467503e9f0bd03e37 491 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 1 483 9.7E-196 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 BD65_1251 c15d948cc05a15d467503e9f0bd03e37 491 Gene3D G3DSA:3.40.50.300 210 490 1.1E-112 T 14-10-2018 BD65_1251 c15d948cc05a15d467503e9f0bd03e37 491 SUPERFAMILY SSF160246 1 63 7.85E-9 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BD65_1251 c15d948cc05a15d467503e9f0bd03e37 491 SMART SM00382 237 355 9.7E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1265 f292aed77ebaeb02b91c9f2ab2700622 238 Gene3D G3DSA:3.10.450.70 22 70 1.9E-22 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 BD65_1265 f292aed77ebaeb02b91c9f2ab2700622 238 SUPERFAMILY SSF52833 88 228 7.97E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1265 f292aed77ebaeb02b91c9f2ab2700622 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BD65_1265 f292aed77ebaeb02b91c9f2ab2700622 238 Gene3D G3DSA:3.40.30.10 71 230 7.4E-50 T 14-10-2018 BD65_1265 f292aed77ebaeb02b91c9f2ab2700622 238 Pfam PF13098 Thioredoxin-like domain 105 227 2.5E-29 T 14-10-2018 IPR012336 Thioredoxin-like fold BD65_1265 f292aed77ebaeb02b91c9f2ab2700622 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 29 76 4.9E-14 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BD65_1265 f292aed77ebaeb02b91c9f2ab2700622 238 SUPERFAMILY SSF54423 22 80 1.15E-15 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 BD65_2681 a52ccfdf74deb27c7dae9c05fdf1d9d2 371 Pfam PF06511 Invasion plasmid antigen IpaD 116 359 4.8E-15 T 14-10-2018 IPR009483 Invasion plasmid antigen IpaD GO:0009405 BD65_2681 a52ccfdf74deb27c7dae9c05fdf1d9d2 371 SUPERFAMILY SSF140693 85 362 2.88E-39 T 14-10-2018 IPR036708 BipD-like superfamily BD65_2681 a52ccfdf74deb27c7dae9c05fdf1d9d2 371 Gene3D G3DSA:1.20.1710.10 56 371 2.7E-50 T 14-10-2018 IPR036708 BipD-like superfamily BD65_2443 462dc60c78f74c8125578e88ba946d68 276 SUPERFAMILY SSF51182 1 260 8.89E-103 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BD65_2443 462dc60c78f74c8125578e88ba946d68 276 Gene3D G3DSA:2.60.120.10 10 262 8.1E-118 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_2443 462dc60c78f74c8125578e88ba946d68 276 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 276 54.164 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BD65_2443 462dc60c78f74c8125578e88ba946d68 276 Gene3D G3DSA:2.60.120.520 30 142 8.1E-118 T 14-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BD65_2443 462dc60c78f74c8125578e88ba946d68 276 Pfam PF04962 KduI/IolB family 34 270 2.1E-36 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BD65_2443 462dc60c78f74c8125578e88ba946d68 276 PIRSF PIRSF006625 1 276 3.0E-129 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BD65_1939 59718383786a3e29d5617961023f532b 700 SUPERFAMILY SSF55021 627 697 1.62E-5 T 14-10-2018 BD65_1939 59718383786a3e29d5617961023f532b 700 Pfam PF02824 TGS domain 388 447 1.2E-20 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BD65_1939 59718383786a3e29d5617961023f532b 700 Gene3D G3DSA:3.30.460.10 193 325 5.7E-48 T 14-10-2018 BD65_1939 59718383786a3e29d5617961023f532b 700 Pfam PF13291 ACT domain 620 697 1.9E-15 T 14-10-2018 IPR002912 ACT domain BD65_1939 59718383786a3e29d5617961023f532b 700 Pfam PF13328 HD domain 26 175 5.5E-53 T 14-10-2018 IPR003607 HD/PDEase domain BD65_1939 59718383786a3e29d5617961023f532b 700 SUPERFAMILY SSF81271 375 447 6.32E-21 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BD65_1939 59718383786a3e29d5617961023f532b 700 Gene3D G3DSA:3.30.70.260 621 700 5.2E-13 T 14-10-2018 BD65_1939 59718383786a3e29d5617961023f532b 700 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.1E-35 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 BD65_1939 59718383786a3e29d5617961023f532b 700 SMART SM00471 41 153 1.4E-11 T 14-10-2018 IPR003607 HD/PDEase domain BD65_1939 59718383786a3e29d5617961023f532b 700 SUPERFAMILY SSF81301 180 392 4.41E-62 T 14-10-2018 BD65_1939 59718383786a3e29d5617961023f532b 700 SMART SM00954 235 345 3.0E-62 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 BD65_1939 59718383786a3e29d5617961023f532b 700 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 696 9.8E-287 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 BD65_1939 59718383786a3e29d5617961023f532b 700 SUPERFAMILY SSF109604 3 190 5.65E-75 T 14-10-2018 BD65_1939 59718383786a3e29d5617961023f532b 700 Gene3D G3DSA:3.10.20.30 381 455 1.2E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_1939 59718383786a3e29d5617961023f532b 700 Gene3D G3DSA:1.10.3210.10 3 190 2.0E-80 T 14-10-2018 BD65_1346 1543bf1e96cff557204ad48887b414cd 253 Pfam PF00005 ABC transporter 10 157 5.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1346 1543bf1e96cff557204ad48887b414cd 253 SUPERFAMILY SSF52540 2 223 2.33E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1346 1543bf1e96cff557204ad48887b414cd 253 SMART SM00382 18 207 4.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1346 1543bf1e96cff557204ad48887b414cd 253 Gene3D G3DSA:3.40.50.300 1 246 6.5E-64 T 14-10-2018 BD65_1346 1543bf1e96cff557204ad48887b414cd 253 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1351 b6cc1332438b80b238ebdd5e5d85eae5 735 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 85 733 3.8E-125 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BD65_1351 b6cc1332438b80b238ebdd5e5d85eae5 735 Pfam PF00593 TonB dependent receptor 280 734 5.1E-53 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BD65_1351 b6cc1332438b80b238ebdd5e5d85eae5 735 Gene3D G3DSA:2.40.170.20 197 735 8.9E-128 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BD65_1351 b6cc1332438b80b238ebdd5e5d85eae5 735 Gene3D G3DSA:2.170.130.10 60 196 1.5E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BD65_1351 b6cc1332438b80b238ebdd5e5d85eae5 735 Pfam PF07715 TonB-dependent Receptor Plug Domain 84 185 5.7E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BD65_1351 b6cc1332438b80b238ebdd5e5d85eae5 735 SUPERFAMILY SSF56935 75 735 1.62E-131 T 14-10-2018 BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.3E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.3E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.3E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.3E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.3E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.8E-99 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 5.0E-5 T 14-10-2018 BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 Gene3D G3DSA:3.40.50.720 1 244 9.5E-85 T 14-10-2018 BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 SUPERFAMILY SSF51735 4 243 2.06E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_57 1bb141a3d7f1f3c11379a3fbd0d5f65e 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 8.4E-66 T 14-10-2018 BD65_2747 d06066025ad12aca2ed068b7d6ce3349 260 SUPERFAMILY SSF56219 41 260 2.49E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BD65_2747 d06066025ad12aca2ed068b7d6ce3349 260 Gene3D G3DSA:3.60.10.10 41 260 2.3E-21 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BD65_2747 d06066025ad12aca2ed068b7d6ce3349 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 173 251 9.6E-7 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BD65_29 2d2266669f3205b91a0dcfc880d5bddc 251 Pfam PF00484 Carbonic anhydrase 98 245 6.4E-33 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BD65_29 2d2266669f3205b91a0dcfc880d5bddc 251 Gene3D G3DSA:3.40.1050.10 47 251 8.0E-53 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BD65_29 2d2266669f3205b91a0dcfc880d5bddc 251 SUPERFAMILY SSF53056 40 250 3.92E-52 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BD65_29 2d2266669f3205b91a0dcfc880d5bddc 251 SMART SM00947 91 251 2.0E-41 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BD65_1993 9efaec7371c873aeede343edb6c3b750 138 Gene3D G3DSA:3.30.70.1290 5 138 9.6E-42 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_1993 9efaec7371c873aeede343edb6c3b750 138 SUPERFAMILY SSF143422 6 135 1.44E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_1993 9efaec7371c873aeede343edb6c3b750 138 Pfam PF01797 Transposase IS200 like 16 134 2.3E-40 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_1993 9efaec7371c873aeede343edb6c3b750 138 SMART SM01321 14 134 1.5E-42 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_566 f462542025386d755b48398e697f1829 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 26.195 T 14-10-2018 IPR022929 Putative manganese efflux pump MntP BD65_566 f462542025386d755b48398e697f1829 189 Pfam PF02659 Putative manganese efflux pump 31 181 1.2E-55 T 14-10-2018 IPR003810 Putative manganese efflux pump BD65_844 3a78dd464a1f29c2876e3e1512c08ca9 187 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 144 162 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_844 3a78dd464a1f29c2876e3e1512c08ca9 187 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 43 186 3.8E-52 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_844 3a78dd464a1f29c2876e3e1512c08ca9 187 Gene3D G3DSA:3.40.30.10 104 186 5.0E-23 T 14-10-2018 BD65_844 3a78dd464a1f29c2876e3e1512c08ca9 187 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 45 186 4.0E-50 T 14-10-2018 BD65_844 3a78dd464a1f29c2876e3e1512c08ca9 187 PIRSF PIRSF000216 17 187 1.6E-52 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_844 3a78dd464a1f29c2876e3e1512c08ca9 187 Gene3D G3DSA:1.10.10.1590 33 103 6.5E-17 T 14-10-2018 BD65_844 3a78dd464a1f29c2876e3e1512c08ca9 187 SUPERFAMILY SSF52833 36 186 1.9E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1982 4deeb8eda1f892fc9f0bad24df0e47d2 127 Pfam PF03899 ATP synthase I chain 13 109 6.8E-17 T 14-10-2018 IPR005598 ATP synthase protein I BD65_1866 2233abdf452f8e8ea29b113948a761a9 205 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 7 143 8.0E-62 T 14-10-2018 IPR006521 Tail protein I BD65_1866 2233abdf452f8e8ea29b113948a761a9 205 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 143 1.2E-49 T 14-10-2018 IPR006521 Tail protein I BD65_214 9bcbb596938ef2c65ba567fe8df1d2d9 434 SUPERFAMILY SSF51905 1 419 4.4E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_214 9bcbb596938ef2c65ba567fe8df1d2d9 434 Gene3D G3DSA:3.30.9.10 134 361 2.6E-51 T 14-10-2018 BD65_214 9bcbb596938ef2c65ba567fe8df1d2d9 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 52.378 T 14-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 BD65_214 9bcbb596938ef2c65ba567fe8df1d2d9 434 SUPERFAMILY SSF54373 269 359 3.92E-18 T 14-10-2018 BD65_214 9bcbb596938ef2c65ba567fe8df1d2d9 434 Gene3D G3DSA:3.50.50.60 1 84 3.4E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_214 9bcbb596938ef2c65ba567fe8df1d2d9 434 Pfam PF01266 FAD dependent oxidoreductase 3 397 3.2E-74 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BD65_214 9bcbb596938ef2c65ba567fe8df1d2d9 434 Gene3D G3DSA:3.50.50.60 105 403 2.6E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1043 5fc14c570e3b4eca849ee273a5a16ce1 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BD65_1043 5fc14c570e3b4eca849ee273a5a16ce1 111 SUPERFAMILY SSF54292 6 109 4.3E-35 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BD65_1043 5fc14c570e3b4eca849ee273a5a16ce1 111 Gene3D G3DSA:3.10.20.30 1 111 2.7E-36 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_1043 5fc14c570e3b4eca849ee273a5a16ce1 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 1.8E-16 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BD65_1043 5fc14c570e3b4eca849ee273a5a16ce1 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 1.6E-60 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 BD65_1043 5fc14c570e3b4eca849ee273a5a16ce1 111 PRINTS PR00355 Adrenodoxin signature 60 74 7.8E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BD65_1043 5fc14c570e3b4eca849ee273a5a16ce1 111 PRINTS PR00355 Adrenodoxin signature 83 91 7.8E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BD65_1043 5fc14c570e3b4eca849ee273a5a16ce1 111 PRINTS PR00355 Adrenodoxin signature 42 52 7.8E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BD65_1721 030f9d393a00cb7350f0070c73720305 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.5E-93 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 BD65_1721 030f9d393a00cb7350f0070c73720305 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1721 030f9d393a00cb7350f0070c73720305 222 Pfam PF00005 ABC transporter 18 165 7.1E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1721 030f9d393a00cb7350f0070c73720305 222 SUPERFAMILY SSF52540 1 216 3.02E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1721 030f9d393a00cb7350f0070c73720305 222 SMART SM00382 27 214 2.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1721 030f9d393a00cb7350f0070c73720305 222 Gene3D G3DSA:3.40.50.300 1 221 3.3E-62 T 14-10-2018 BD65_632 302dfcce62f93af7535cec8693bae167 388 SUPERFAMILY SSF46626 163 279 1.96E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BD65_632 302dfcce62f93af7535cec8693bae167 388 PIRSF PIRSF000018 2 388 1.9E-130 T 14-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 BD65_632 302dfcce62f93af7535cec8693bae167 388 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 282 360 1.1E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_632 302dfcce62f93af7535cec8693bae167 388 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 16 113 1.0E-4 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_632 302dfcce62f93af7535cec8693bae167 388 Gene3D G3DSA:1.10.760.10 267 388 2.8E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BD65_632 302dfcce62f93af7535cec8693bae167 388 Gene3D G3DSA:1.10.760.10 152 266 1.5E-8 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BD65_632 302dfcce62f93af7535cec8693bae167 388 SUPERFAMILY SSF46626 283 385 3.58E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BD65_632 302dfcce62f93af7535cec8693bae167 388 Gene3D G3DSA:1.10.760.10 1 121 2.5E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BD65_632 302dfcce62f93af7535cec8693bae167 388 SUPERFAMILY SSF46626 18 137 1.35E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BD65_245 07f4e47392a5d769e5daf6dc09e5bb81 307 Gene3D G3DSA:3.40.1090.10 1 104 8.3E-20 T 14-10-2018 BD65_245 07f4e47392a5d769e5daf6dc09e5bb81 307 Gene3D G3DSA:3.40.1090.10 105 213 8.6E-15 T 14-10-2018 BD65_245 07f4e47392a5d769e5daf6dc09e5bb81 307 Pfam PF01734 Patatin-like phospholipase 8 165 7.4E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BD65_245 07f4e47392a5d769e5daf6dc09e5bb81 307 SUPERFAMILY SSF52151 1 302 9.16E-56 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BD65_3137 32e6d81da9c9ee3ad8fa878d6665e1da 289 Gene3D G3DSA:1.10.10.10 1 87 7.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_3137 32e6d81da9c9ee3ad8fa878d6665e1da 289 Pfam PF03466 LysR substrate binding domain 85 285 3.0E-38 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_3137 32e6d81da9c9ee3ad8fa878d6665e1da 289 SUPERFAMILY SSF53850 85 287 3.5E-35 T 14-10-2018 BD65_3137 32e6d81da9c9ee3ad8fa878d6665e1da 289 Gene3D G3DSA:3.40.190.290 89 289 2.6E-31 T 14-10-2018 BD65_3137 32e6d81da9c9ee3ad8fa878d6665e1da 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_3137 32e6d81da9c9ee3ad8fa878d6665e1da 289 SUPERFAMILY SSF46785 1 83 8.16E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_348 2579e38532b4ab10d953480982eab091 816 PIRSF PIRSF034586 4 459 5.2E-167 T 14-10-2018 IPR017030 Virulence effector, SrfC BD65_348 2579e38532b4ab10d953480982eab091 816 PIRSF PIRSF034586 455 816 1.1E-112 T 14-10-2018 IPR017030 Virulence effector, SrfC BD65_348 2579e38532b4ab10d953480982eab091 816 Pfam PF10139 Putative bacterial virulence factor 461 808 8.6E-61 T 14-10-2018 IPR017030 Virulence effector, SrfC BD65_348 2579e38532b4ab10d953480982eab091 816 Pfam PF10139 Putative bacterial virulence factor 28 456 4.7E-135 T 14-10-2018 IPR017030 Virulence effector, SrfC BD65_63 6249848d4b68864fbd934e6a09e2db97 335 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 321 7.7E-45 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_63 6249848d4b68864fbd934e6a09e2db97 335 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 200 1.8E-61 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_63 6249848d4b68864fbd934e6a09e2db97 335 Pfam PF13177 DNA polymerase III, delta subunit 9 166 9.6E-42 T 14-10-2018 BD65_63 6249848d4b68864fbd934e6a09e2db97 335 Gene3D G3DSA:3.40.50.300 1 166 7.0E-49 T 14-10-2018 BD65_63 6249848d4b68864fbd934e6a09e2db97 335 Gene3D G3DSA:1.20.272.10 208 328 1.6E-43 T 14-10-2018 BD65_63 6249848d4b68864fbd934e6a09e2db97 335 SUPERFAMILY SSF48019 208 324 4.59E-36 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BD65_63 6249848d4b68864fbd934e6a09e2db97 335 SUPERFAMILY SSF52540 1 206 4.56E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2167 7920cee261930e3325b1021e558bd9ad 848 SUPERFAMILY SSF51905 2 189 1.62E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2167 7920cee261930e3325b1021e558bd9ad 848 SUPERFAMILY SSF56014 632 808 9.95E-46 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 6.6E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 6.6E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 Gene3D G3DSA:3.30.413.10 631 782 1.2E-29 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 5.0E-11 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 5.0E-11 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 5.0E-11 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 5.0E-11 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 621 1.8E-9 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 SUPERFAMILY SSF51905 144 310 4.64E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.7E-14 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.7E-14 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 6.7E-14 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 6.7E-14 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 2.7E-15 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BD65_2167 7920cee261930e3325b1021e558bd9ad 848 SUPERFAMILY SSF55124 501 626 4.51E-29 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 Gene3D G3DSA:3.50.50.60 8 283 2.2E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2167 7920cee261930e3325b1021e558bd9ad 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 756 5.5E-14 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 Gene3D G3DSA:3.50.50.60 110 246 2.2E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2167 7920cee261930e3325b1021e558bd9ad 848 PIRSF PIRSF037149 1 834 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 Gene3D G3DSA:1.10.10.1100 422 476 2.2E-12 T 14-10-2018 BD65_2167 7920cee261930e3325b1021e558bd9ad 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 4.9E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BD65_1527 838144066869b759476969ed6f4152fd 906 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 380 386 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BD65_1527 838144066869b759476969ed6f4152fd 906 PRINTS PR01836 Magnesium-transporting ATPase signature 860 881 6.1E-84 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 BD65_1527 838144066869b759476969ed6f4152fd 906 PRINTS PR01836 Magnesium-transporting ATPase signature 308 327 6.1E-84 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 BD65_1527 838144066869b759476969ed6f4152fd 906 PRINTS PR01836 Magnesium-transporting ATPase signature 412 425 6.1E-84 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 BD65_1527 838144066869b759476969ed6f4152fd 906 PRINTS PR01836 Magnesium-transporting ATPase signature 775 791 6.1E-84 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 BD65_1527 838144066869b759476969ed6f4152fd 906 PRINTS PR01836 Magnesium-transporting ATPase signature 705 720 6.1E-84 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 BD65_1527 838144066869b759476969ed6f4152fd 906 PRINTS PR01836 Magnesium-transporting ATPase signature 291 307 6.1E-84 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 BD65_1527 838144066869b759476969ed6f4152fd 906 PRINTS PR01836 Magnesium-transporting ATPase signature 723 734 6.1E-84 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 BD65_1527 838144066869b759476969ed6f4152fd 906 PRINTS PR01836 Magnesium-transporting ATPase signature 810 831 6.1E-84 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 BD65_1527 838144066869b759476969ed6f4152fd 906 PRINTS PR01836 Magnesium-transporting ATPase signature 755 768 6.1E-84 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 BD65_1527 838144066869b759476969ed6f4152fd 906 SUPERFAMILY SSF56784 537 691 1.43E-38 T 14-10-2018 IPR036412 HAD-like superfamily BD65_1527 838144066869b759476969ed6f4152fd 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 614 736 1.0E-29 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_1527 838144066869b759476969ed6f4152fd 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 274 396 7.7E-20 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BD65_1527 838144066869b759476969ed6f4152fd 906 SMART SM00831 51 124 1.3E-5 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 BD65_1527 838144066869b759476969ed6f4152fd 906 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 44 906 0.0 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 BD65_1527 838144066869b759476969ed6f4152fd 906 Gene3D G3DSA:2.70.150.10 67 281 1.1E-84 T 14-10-2018 BD65_1527 838144066869b759476969ed6f4152fd 906 SUPERFAMILY SSF81653 176 277 3.01E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BD65_1527 838144066869b759476969ed6f4152fd 906 Pfam PF00702 haloacid dehalogenase-like hydrolase 374 661 1.3E-21 T 14-10-2018 BD65_1527 838144066869b759476969ed6f4152fd 906 SUPERFAMILY SSF81660 347 551 1.96E-40 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BD65_1527 838144066869b759476969ed6f4152fd 906 Pfam PF00122 E1-E2 ATPase 162 358 5.2E-44 T 14-10-2018 BD65_1527 838144066869b759476969ed6f4152fd 906 Gene3D G3DSA:1.20.1110.10 692 806 1.1E-81 T 14-10-2018 BD65_1527 838144066869b759476969ed6f4152fd 906 Gene3D G3DSA:3.40.1110.10 436 554 1.1E-81 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BD65_1527 838144066869b759476969ed6f4152fd 906 Gene3D G3DSA:1.20.1110.10 102 374 1.1E-84 T 14-10-2018 BD65_1527 838144066869b759476969ed6f4152fd 906 Gene3D G3DSA:3.40.50.1000 375 387 1.1E-84 T 14-10-2018 IPR023214 HAD superfamily BD65_1527 838144066869b759476969ed6f4152fd 906 Pfam PF00690 Cation transporter/ATPase, N-terminus 56 119 9.6E-14 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 BD65_1527 838144066869b759476969ed6f4152fd 906 Gene3D G3DSA:3.40.50.1000 555 691 1.1E-81 T 14-10-2018 IPR023214 HAD superfamily BD65_1527 838144066869b759476969ed6f4152fd 906 SUPERFAMILY SSF81665 55 904 3.79E-100 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BD65_1286 fb37ce0beb57372286879440cc0e954b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1286 fb37ce0beb57372286879440cc0e954b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1286 fb37ce0beb57372286879440cc0e954b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1286 fb37ce0beb57372286879440cc0e954b 297 SUPERFAMILY SSF46785 4 110 3.31E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1286 fb37ce0beb57372286879440cc0e954b 297 Gene3D G3DSA:3.40.190.290 89 295 4.1E-63 T 14-10-2018 BD65_1286 fb37ce0beb57372286879440cc0e954b 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 8.8E-111 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP BD65_1286 fb37ce0beb57372286879440cc0e954b 297 Pfam PF03466 LysR substrate binding domain 93 289 6.2E-13 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1286 fb37ce0beb57372286879440cc0e954b 297 Gene3D G3DSA:1.10.10.10 2 83 1.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1286 fb37ce0beb57372286879440cc0e954b 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 57.081 T 14-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria BD65_1286 fb37ce0beb57372286879440cc0e954b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1286 fb37ce0beb57372286879440cc0e954b 297 SUPERFAMILY SSF53850 92 290 1.99E-19 T 14-10-2018 BD65_488 87d69625e868db62e142e7ec7c78a7c7 93 SUPERFAMILY SSF140931 13 92 1.57E-15 T 14-10-2018 IPR036597 Fido-like domain superfamily BD65_488 87d69625e868db62e142e7ec7c78a7c7 93 Pfam PF02661 Fic/DOC family 18 51 9.3E-6 T 14-10-2018 IPR003812 Fido domain BD65_488 87d69625e868db62e142e7ec7c78a7c7 93 Gene3D G3DSA:1.10.3290.10 1 93 3.0E-23 T 14-10-2018 IPR036597 Fido-like domain superfamily BD65_1052 b87e6ff351f83dbe535085fb4fe94838 339 Pfam PF03824 High-affinity nickel-transport protein 75 325 9.5E-41 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 BD65_2442 511aa2107c7a78c6774f6f51dba27b86 392 SUPERFAMILY SSF51338 10 388 8.81E-15 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_2442 511aa2107c7a78c6774f6f51dba27b86 392 Gene3D G3DSA:2.30.40.10 12 382 1.7E-117 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_2442 511aa2107c7a78c6774f6f51dba27b86 392 Gene3D G3DSA:3.20.20.140 54 355 1.7E-117 T 14-10-2018 BD65_2442 511aa2107c7a78c6774f6f51dba27b86 392 PIRSF PIRSF038994 3 388 3.0E-125 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BD65_2442 511aa2107c7a78c6774f6f51dba27b86 392 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 21 381 2.4E-87 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BD65_2442 511aa2107c7a78c6774f6f51dba27b86 392 SUPERFAMILY SSF51556 54 355 8.38E-90 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_2442 511aa2107c7a78c6774f6f51dba27b86 392 Pfam PF01979 Amidohydrolase family 50 383 2.4E-20 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BD65_2765 6b8a5cda94eea5f5f3fefeb04d1d60dd 75 Pfam PF04400 (Na+)-NQR maturation NqrM 23 63 3.2E-21 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM BD65_2501 1bc9487f399df77142f93d75903c8309 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.845 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BD65_2501 1bc9487f399df77142f93d75903c8309 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 1.1E-290 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BD65_2501 1bc9487f399df77142f93d75903c8309 635 Gene3D G3DSA:2.60.34.10 383 523 7.6E-67 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 SUPERFAMILY SSF100934 507 604 3.14E-16 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 SUPERFAMILY SSF53067 4 183 2.7E-66 T 14-10-2018 BD65_2501 1bc9487f399df77142f93d75903c8309 635 Gene3D G3DSA:3.90.640.10 229 316 2.8E-171 T 14-10-2018 BD65_2501 1bc9487f399df77142f93d75903c8309 635 Gene3D G3DSA:1.20.1270.10 524 603 8.3E-29 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 SUPERFAMILY SSF53067 187 382 1.23E-67 T 14-10-2018 BD65_2501 1bc9487f399df77142f93d75903c8309 635 Gene3D G3DSA:3.30.420.40 5 379 2.8E-171 T 14-10-2018 BD65_2501 1bc9487f399df77142f93d75903c8309 635 Pfam PF00012 Hsp70 protein 4 602 1.6E-265 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 Gene3D G3DSA:3.30.420.40 180 366 2.8E-171 T 14-10-2018 BD65_2501 1bc9487f399df77142f93d75903c8309 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.9E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 PRINTS PR00301 70kDa heat shock protein signature 334 350 2.9E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.9E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 PRINTS PR00301 70kDa heat shock protein signature 198 208 2.9E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.9E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 PRINTS PR00301 70kDa heat shock protein signature 469 485 2.9E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.9E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 PRINTS PR00301 70kDa heat shock protein signature 388 407 2.9E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 PRINTS PR00301 70kDa heat shock protein signature 365 385 2.9E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BD65_2501 1bc9487f399df77142f93d75903c8309 635 SUPERFAMILY SSF100920 384 540 1.12E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BD65_94 5c725019463fce923656cc6720f21210 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 11 25 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BD65_94 5c725019463fce923656cc6720f21210 479 SUPERFAMILY SSF51445 5 472 1.13E-159 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_94 5c725019463fce923656cc6720f21210 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site BD65_94 5c725019463fce923656cc6720f21210 479 Pfam PF00232 Glycosyl hydrolase family 1 4 476 9.1E-129 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_94 5c725019463fce923656cc6720f21210 479 Gene3D G3DSA:3.20.20.80 1 478 4.9E-163 T 14-10-2018 BD65_94 5c725019463fce923656cc6720f21210 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 307 321 1.2E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_94 5c725019463fce923656cc6720f21210 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 1.2E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_94 5c725019463fce923656cc6720f21210 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 1.2E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_94 5c725019463fce923656cc6720f21210 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 1.2E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_94 5c725019463fce923656cc6720f21210 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 1.2E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BD65_2093 f79bd2f16ae9a644504e548bf6c6fc8b 263 SUPERFAMILY SSF141868 31 258 1.83E-30 T 14-10-2018 IPR035919 EAL domain superfamily BD65_2093 f79bd2f16ae9a644504e548bf6c6fc8b 263 SMART SM00052 10 253 2.7E-11 T 14-10-2018 IPR001633 EAL domain BD65_2093 f79bd2f16ae9a644504e548bf6c6fc8b 263 Gene3D G3DSA:3.20.20.450 25 258 2.2E-35 T 14-10-2018 IPR035919 EAL domain superfamily BD65_2093 f79bd2f16ae9a644504e548bf6c6fc8b 263 Pfam PF00563 EAL domain 32 248 2.0E-27 T 14-10-2018 IPR001633 EAL domain BD65_234 7c7aa81f3c197105cd7757f614af872a 348 Gene3D G3DSA:3.90.650.10 164 347 1.9E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BD65_234 7c7aa81f3c197105cd7757f614af872a 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 337 6.7E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain BD65_234 7c7aa81f3c197105cd7757f614af872a 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 1.8E-18 T 14-10-2018 IPR016188 PurM-like, N-terminal domain BD65_234 7c7aa81f3c197105cd7757f614af872a 348 SUPERFAMILY SSF55326 7 160 1.0E-40 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BD65_234 7c7aa81f3c197105cd7757f614af872a 348 PIRSF PIRSF036407 2 347 6.8E-120 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 BD65_234 7c7aa81f3c197105cd7757f614af872a 348 Gene3D G3DSA:3.30.1330.10 3 162 8.3E-48 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BD65_234 7c7aa81f3c197105cd7757f614af872a 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 312 1.9E-138 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 BD65_234 7c7aa81f3c197105cd7757f614af872a 348 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 46.058 T 14-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 BD65_234 7c7aa81f3c197105cd7757f614af872a 348 SUPERFAMILY SSF56042 164 336 3.4E-51 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BD65_1410 0b9e78c2c6b8e2787a9aa33c57804e00 159 Gene3D G3DSA:3.40.140.10 36 159 1.0E-40 T 14-10-2018 BD65_1410 0b9e78c2c6b8e2787a9aa33c57804e00 159 Pfam PF04002 RadC-like JAB domain 40 157 1.1E-40 T 14-10-2018 IPR025657 RadC-like JAB domain BD65_1410 0b9e78c2c6b8e2787a9aa33c57804e00 159 TIGRFAM TIGR00608 radc: DNA repair protein RadC 37 159 1.3E-41 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 BD65_770 dcc9717946f0de3edd5ea3e4e917a444 312 SUPERFAMILY SSF53613 7 290 5.14E-67 T 14-10-2018 IPR029056 Ribokinase-like BD65_770 dcc9717946f0de3edd5ea3e4e917a444 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BD65_770 dcc9717946f0de3edd5ea3e4e917a444 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 2.4E-100 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 BD65_770 dcc9717946f0de3edd5ea3e4e917a444 312 PIRSF PIRSF000535 2 311 3.1E-115 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BD65_770 dcc9717946f0de3edd5ea3e4e917a444 312 Gene3D G3DSA:3.40.1190.20 2 310 1.4E-91 T 14-10-2018 IPR029056 Ribokinase-like BD65_770 dcc9717946f0de3edd5ea3e4e917a444 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 1.4E-98 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BD65_770 dcc9717946f0de3edd5ea3e4e917a444 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BD65_770 dcc9717946f0de3edd5ea3e4e917a444 312 Pfam PF00294 pfkB family carbohydrate kinase 14 292 2.3E-64 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BD65_2419 00d71b002dcf69f37e4ee70b3c581632 465 Pfam PF01420 Type I restriction modification DNA specificity domain 257 441 3.8E-12 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 BD65_2419 00d71b002dcf69f37e4ee70b3c581632 465 Pfam PF01420 Type I restriction modification DNA specificity domain 31 219 2.1E-13 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 BD65_2419 00d71b002dcf69f37e4ee70b3c581632 465 Gene3D G3DSA:3.90.220.20 261 413 3.1E-86 T 14-10-2018 BD65_2419 00d71b002dcf69f37e4ee70b3c581632 465 Gene3D G3DSA:1.10.287.1120 186 456 3.1E-86 T 14-10-2018 BD65_2419 00d71b002dcf69f37e4ee70b3c581632 465 SUPERFAMILY SSF116734 19 236 9.48E-36 T 14-10-2018 BD65_2419 00d71b002dcf69f37e4ee70b3c581632 465 Gene3D G3DSA:3.90.220.20 28 460 3.1E-86 T 14-10-2018 BD65_2419 00d71b002dcf69f37e4ee70b3c581632 465 SUPERFAMILY SSF116734 245 460 5.89E-36 T 14-10-2018 BD65_3267 b9da8b3329a0e51742b7c4087f0e010f 95 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 3 89 1.8E-28 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BD65_3267 b9da8b3329a0e51742b7c4087f0e010f 95 SUPERFAMILY SSF51690 2 87 2.55E-28 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BD65_3267 b9da8b3329a0e51742b7c4087f0e010f 95 Gene3D G3DSA:3.20.140.10 1 95 2.3E-37 T 14-10-2018 BD65_2426 2a96a4cdf9c4a0a5cebbb65bf943af5a 149 Pfam PF00665 Integrase core domain 8 104 1.6E-22 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_2426 2a96a4cdf9c4a0a5cebbb65bf943af5a 149 Gene3D G3DSA:3.30.420.10 1 127 2.1E-16 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2426 2a96a4cdf9c4a0a5cebbb65bf943af5a 149 SUPERFAMILY SSF53098 2 144 3.04E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2996 8d1caf924a15c10494f07096978c5224 266 Gene3D G3DSA:3.40.50.1360 1 266 2.5E-115 T 14-10-2018 BD65_2996 8d1caf924a15c10494f07096978c5224 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.277 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BD65_2996 8d1caf924a15c10494f07096978c5224 266 SUPERFAMILY SSF100950 1 263 2.47E-104 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BD65_2996 8d1caf924a15c10494f07096978c5224 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 229 3.7E-19 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 BD65_2996 8d1caf924a15c10494f07096978c5224 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 3.6E-137 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BD65_2996 8d1caf924a15c10494f07096978c5224 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BD65_2024 ad9dda770373e5628b94c54c3a224fb9 137 Gene3D G3DSA:2.60.40.790 33 137 3.0E-21 T 14-10-2018 IPR008978 HSP20-like chaperone BD65_2024 ad9dda770373e5628b94c54c3a224fb9 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 42.664 T 14-10-2018 IPR023728 Small heat shock protein IbpA BD65_2024 ad9dda770373e5628b94c54c3a224fb9 137 SUPERFAMILY SSF49764 31 137 8.72E-21 T 14-10-2018 IPR008978 HSP20-like chaperone BD65_2024 ad9dda770373e5628b94c54c3a224fb9 137 Pfam PF00011 Hsp20/alpha crystallin family 43 137 1.9E-20 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.5E-174 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 SUPERFAMILY SSF52540 3 301 4.09E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.8E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 PIRSF PIRSF006641 1 363 1.1E-157 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 Gene3D G3DSA:3.40.50.300 4 278 5.4E-154 T 14-10-2018 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 Gene3D G3DSA:3.10.20.30 48 362 5.4E-154 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.7E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 Gene3D G3DSA:1.10.150.300 120 200 5.4E-154 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.745 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BD65_139 f2365ad2ef1a4379f159e43f5dc350b8 363 SUPERFAMILY SSF81271 279 359 6.76E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 Gene3D G3DSA:3.90.100.10 644 768 1.4E-39 T 14-10-2018 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 PIRSF PIRSF009393 6 769 5.9E-279 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 Gene3D G3DSA:3.40.640.10 150 453 9.5E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 394 408 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 Gene3D G3DSA:3.90.1150.10 454 643 3.4E-75 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 Gene3D G3DSA:3.40.50.2300 10 149 3.6E-48 T 14-10-2018 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 26 144 8.1E-24 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 SUPERFAMILY SSF55904 623 764 3.27E-35 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 150 603 1.5E-160 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 628 757 1.3E-42 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 BD65_3113 86e34609c43794cc5ff51cc2d009316d 769 SUPERFAMILY SSF53383 150 621 1.13E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 Pfam PF00128 Alpha amylase, catalytic domain 273 343 2.0E-10 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 PIRSF PIRSF000463 7 727 4.0E-288 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.79 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 SUPERFAMILY SSF51011 624 726 4.75E-34 T 14-10-2018 BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 Gene3D G3DSA:3.20.20.80 231 612 1.3E-172 T 14-10-2018 BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 Gene3D G3DSA:2.60.40.1180 623 727 2.0E-37 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 Gene3D G3DSA:2.60.40.10 3 221 5.9E-77 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 SUPERFAMILY SSF81296 117 224 1.66E-35 T 14-10-2018 IPR014756 Immunoglobulin E-set BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 SMART SM00642 247 601 2.4E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 SUPERFAMILY SSF81296 16 115 5.6E-16 T 14-10-2018 IPR014756 Immunoglobulin E-set BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 1.4E-24 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 3.5E-21 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 8.9E-303 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BD65_2117 d6a539d09d19cae417404a5b9a1aabdc 727 SUPERFAMILY SSF51445 230 620 6.04E-114 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 Gene3D G3DSA:3.30.70.1170 173 230 4.9E-25 T 14-10-2018 BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 7.7E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 7.7E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 7.7E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 7.7E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 7.7E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 Pfam PF01029 NusB family 6 127 1.7E-23 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 Gene3D G3DSA:1.10.940.10 1 145 6.5E-48 T 14-10-2018 IPR035926 NusB-like superfamily BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 Gene3D G3DSA:3.40.50.150 231 429 1.3E-72 T 14-10-2018 BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 SUPERFAMILY SSF48013 6 149 3.11E-35 T 14-10-2018 IPR035926 NusB-like superfamily BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 3.7E-76 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 Gene3D G3DSA:1.10.287.730 146 172 7.7E-15 T 14-10-2018 BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 428 4.7E-173 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 68.783 T 14-10-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 BD65_2239 439c544726fd796b6af6c3c92ee385a3 429 SUPERFAMILY SSF53335 141 428 2.3E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_3144 01c63e7e0aa3ff6009ef5cf330cf61af 506 SUPERFAMILY SSF52540 253 489 6.47E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3144 01c63e7e0aa3ff6009ef5cf330cf61af 506 SUPERFAMILY SSF52540 12 234 9.35E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3144 01c63e7e0aa3ff6009ef5cf330cf61af 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_3144 01c63e7e0aa3ff6009ef5cf330cf61af 506 Gene3D G3DSA:3.40.50.300 263 501 2.7E-37 T 14-10-2018 BD65_3144 01c63e7e0aa3ff6009ef5cf330cf61af 506 SMART SM00382 288 483 1.2 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3144 01c63e7e0aa3ff6009ef5cf330cf61af 506 SMART SM00382 38 233 4.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3144 01c63e7e0aa3ff6009ef5cf330cf61af 506 Pfam PF00005 ABC transporter 29 178 5.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3144 01c63e7e0aa3ff6009ef5cf330cf61af 506 Gene3D G3DSA:3.40.50.300 2 249 1.7E-57 T 14-10-2018 BD65_3144 01c63e7e0aa3ff6009ef5cf330cf61af 506 Pfam PF00005 ABC transporter 280 434 4.0E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2811 0b03c038c034d0765454e563cee522af 305 Gene3D G3DSA:1.10.600.10 8 305 2.0E-104 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily BD65_2811 0b03c038c034d0765454e563cee522af 305 SUPERFAMILY SSF48576 10 288 1.54E-86 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily BD65_2811 0b03c038c034d0765454e563cee522af 305 Pfam PF00348 Polyprenyl synthetase 38 271 7.1E-58 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BD65_2811 0b03c038c034d0765454e563cee522af 305 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 87 103 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site BD65_2811 0b03c038c034d0765454e563cee522af 305 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 221 233 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site BD65_874 e52195a7a9d0e8fddda5728946ece0d1 423 PIRSF PIRSF001563 6 421 1.3E-107 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BD65_874 e52195a7a9d0e8fddda5728946ece0d1 423 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 BD65_874 e52195a7a9d0e8fddda5728946ece0d1 423 Pfam PF08245 Mur ligase middle domain 54 196 6.2E-8 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BD65_874 e52195a7a9d0e8fddda5728946ece0d1 423 Gene3D G3DSA:3.40.1190.10 1 287 3.8E-97 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_874 e52195a7a9d0e8fddda5728946ece0d1 423 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 340 9.6E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BD65_874 e52195a7a9d0e8fddda5728946ece0d1 423 Gene3D G3DSA:3.90.190.20 288 421 1.5E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_874 e52195a7a9d0e8fddda5728946ece0d1 423 SUPERFAMILY SSF53623 13 285 2.56E-86 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_874 e52195a7a9d0e8fddda5728946ece0d1 423 SUPERFAMILY SSF53244 286 416 1.5E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_874 e52195a7a9d0e8fddda5728946ece0d1 423 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 1.7E-106 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BD65_1436 a41b138ad910de8b2f8c27fa9323d34e 438 Gene3D G3DSA:1.10.150.130 111 226 3.4E-10 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BD65_1436 a41b138ad910de8b2f8c27fa9323d34e 438 Pfam PF13356 Arm DNA-binding domain 5 97 9.9E-12 T 14-10-2018 IPR025166 Integrase, DNA-binding domain BD65_1436 a41b138ad910de8b2f8c27fa9323d34e 438 Pfam PF00589 Phage integrase family 256 391 1.4E-7 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_1436 a41b138ad910de8b2f8c27fa9323d34e 438 Gene3D G3DSA:1.10.443.10 227 426 6.4E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BD65_1436 a41b138ad910de8b2f8c27fa9323d34e 438 Gene3D G3DSA:3.30.160.390 3 110 9.6E-14 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily BD65_1436 a41b138ad910de8b2f8c27fa9323d34e 438 SUPERFAMILY SSF56349 114 413 5.3E-36 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 Pfam PF12161 HsdM N-terminal domain 1 90 1.1E-6 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 SUPERFAMILY SSF53335 1 450 7.49E-119 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 41 410 5.2E-78 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 Gene3D G3DSA:3.40.50.150 128 407 3.4E-80 T 14-10-2018 BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 Pfam PF02384 N-6 DNA Methylase 104 409 1.3E-104 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 264 288 2.5E-21 T 14-10-2018 BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 155 169 2.5E-21 T 14-10-2018 BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 127 143 2.5E-21 T 14-10-2018 BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 227 239 2.5E-21 T 14-10-2018 BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 230 236 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_2420 b99f881caa85752e2ae6ed08ec8e377d 781 Gene3D G3DSA:1.20.1260.30 1 127 5.8E-12 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 Gene3D G3DSA:1.20.120.530 80 239 2.6E-43 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.3E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 162.665 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 SUPERFAMILY SSF46785 11 87 2.69E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 Gene3D G3DSA:1.10.10.10 1 79 6.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 SMART SM00345 12 71 1.0E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 SUPERFAMILY SSF48008 79 230 3.27E-65 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 1.1E-122 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 BD65_212 8a48d29a5e6f66bd8253049019fe6600 239 Pfam PF07840 FadR C-terminal domain 72 234 6.8E-74 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.899 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 SUPERFAMILY SSF52374 11 337 3.1E-100 T 14-10-2018 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 550 3.2E-303 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 1.2E-63 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 Gene3D G3DSA:3.90.800.10 101 209 1.2E-106 T 14-10-2018 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 Gene3D G3DSA:2.40.240.10 463 547 6.7E-35 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 Gene3D G3DSA:3.40.50.620 30 247 1.2E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2998 b028a4f444c729d0703d867f5e241edc 555 Gene3D G3DSA:1.10.1160.10 261 339 6.0E-36 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 4.3E-127 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 Gene3D G3DSA:2.40.240.10 348 462 2.1E-47 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2998 b028a4f444c729d0703d867f5e241edc 555 SUPERFAMILY SSF50715 340 547 6.8E-80 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_2737 10a82021d6a824cf8086dc3bca5b8b2f 243 SUPERFAMILY SSF64438 3 242 2.2E-84 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BD65_2737 10a82021d6a824cf8086dc3bca5b8b2f 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 1.2E-74 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BD65_2737 10a82021d6a824cf8086dc3bca5b8b2f 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 26 242 6.1E-67 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BD65_2737 10a82021d6a824cf8086dc3bca5b8b2f 243 Gene3D G3DSA:3.60.140.10 1 243 8.0E-94 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily BD65_2649 98124fda1de74491d103ba1b25351bc3 105 Pfam PF01548 Transposase 2 80 2.2E-13 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BD65_731 ce066eaa30992e46a7dfbf6a431733f8 260 Pfam PF06167 Glucose-regulated metallo-peptidase M90 17 242 4.9E-63 T 14-10-2018 IPR010384 MtfA family BD65_731 ce066eaa30992e46a7dfbf6a431733f8 260 Hamap MF_01593 Protein MtfA [mtfA]. 1 260 62.952 T 14-10-2018 IPR010384 MtfA family BD65_731 ce066eaa30992e46a7dfbf6a431733f8 260 SUPERFAMILY SSF55486 34 244 4.47E-40 T 14-10-2018 BD65_731 ce066eaa30992e46a7dfbf6a431733f8 260 Gene3D G3DSA:1.10.472.150 16 139 8.1E-42 T 14-10-2018 BD65_731 ce066eaa30992e46a7dfbf6a431733f8 260 Gene3D G3DSA:3.40.390.10 140 259 1.1E-39 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BD65_2697 afc645874705bdeb280123f560c09c37 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 4.2E-40 T 14-10-2018 IPR003004 GspF/PilC family BD65_2697 afc645874705bdeb280123f560c09c37 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 4.2E-40 T 14-10-2018 IPR003004 GspF/PilC family BD65_2697 afc645874705bdeb280123f560c09c37 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 4.2E-40 T 14-10-2018 IPR003004 GspF/PilC family BD65_2697 afc645874705bdeb280123f560c09c37 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 4.2E-40 T 14-10-2018 IPR003004 GspF/PilC family BD65_2697 afc645874705bdeb280123f560c09c37 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BD65_2697 afc645874705bdeb280123f560c09c37 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 8.3E-142 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 BD65_2697 afc645874705bdeb280123f560c09c37 405 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 5.3E-30 T 14-10-2018 IPR018076 Type II secretion system F domain BD65_2697 afc645874705bdeb280123f560c09c37 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 395 2.8E-21 T 14-10-2018 IPR018076 Type II secretion system F domain BD65_2697 afc645874705bdeb280123f560c09c37 405 Gene3D G3DSA:1.20.81.30 58 173 2.0E-30 T 14-10-2018 BD65_2697 afc645874705bdeb280123f560c09c37 405 Gene3D G3DSA:1.20.81.30 258 368 4.8E-22 T 14-10-2018 BD65_613 5bd62d2ba49722caefd360b636abda17 290 SUPERFAMILY SSF55174 8 62 3.53E-11 T 14-10-2018 BD65_613 5bd62d2ba49722caefd360b636abda17 290 Gene3D G3DSA:3.30.70.580 70 228 5.9E-56 T 14-10-2018 BD65_613 5bd62d2ba49722caefd360b636abda17 290 Gene3D G3DSA:3.10.290.10 1 62 6.7E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BD65_613 5bd62d2ba49722caefd360b636abda17 290 Gene3D G3DSA:3.30.70.1560 134 207 5.9E-56 T 14-10-2018 BD65_613 5bd62d2ba49722caefd360b636abda17 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 225 2.1E-52 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BD65_613 5bd62d2ba49722caefd360b636abda17 290 SUPERFAMILY SSF55120 69 229 3.2E-37 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_613 5bd62d2ba49722caefd360b636abda17 290 Pfam PF01479 S4 domain 8 52 7.1E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_613 5bd62d2ba49722caefd360b636abda17 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BD65_613 5bd62d2ba49722caefd360b636abda17 290 SMART SM00363 7 63 2.9E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_613 5bd62d2ba49722caefd360b636abda17 290 Pfam PF00849 RNA pseudouridylate synthase 69 195 1.1E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_1278 f1915245aa66ca7fcc246ea911f75b07 404 Gene3D G3DSA:3.50.50.60 1 226 7.9E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1278 f1915245aa66ca7fcc246ea911f75b07 404 Gene3D G3DSA:3.50.50.60 260 404 6.6E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1278 f1915245aa66ca7fcc246ea911f75b07 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 394 1.8E-136 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BD65_1278 f1915245aa66ca7fcc246ea911f75b07 404 SUPERFAMILY SSF51905 4 388 3.05E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1278 f1915245aa66ca7fcc246ea911f75b07 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 4.1E-19 T 14-10-2018 BD65_1278 f1915245aa66ca7fcc246ea911f75b07 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 4.1E-19 T 14-10-2018 BD65_1278 f1915245aa66ca7fcc246ea911f75b07 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 4.1E-19 T 14-10-2018 BD65_1278 f1915245aa66ca7fcc246ea911f75b07 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 4.1E-19 T 14-10-2018 BD65_1278 f1915245aa66ca7fcc246ea911f75b07 404 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 BD65_1278 f1915245aa66ca7fcc246ea911f75b07 404 Pfam PF01494 FAD binding domain 4 349 3.4E-28 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 BD65_1040 c4454aed05e1585b00e409604209442e 291 Pfam PF14581 SseB protein C-terminal domain 165 275 4.0E-33 T 14-10-2018 IPR027945 SseB protein, C-terminal BD65_1040 c4454aed05e1585b00e409604209442e 291 Pfam PF07179 SseB protein N-terminal domain 26 149 1.5E-25 T 14-10-2018 IPR009839 SseB protein N-terminal domain BD65_1686 bcc49bb291e68626cad70df7b44fde1c 87 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.9E-20 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BD65_1686 bcc49bb291e68626cad70df7b44fde1c 87 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 23.185 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BD65_1686 bcc49bb291e68626cad70df7b44fde1c 87 Pfam PF02416 mttA/Hcf106 family 4 56 7.8E-13 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BD65_2937 1f4e20aebcda944a101d5d425bf0b262 741 Gene3D G3DSA:3.40.50.2000 1 735 0.0 T 14-10-2018 BD65_2937 1f4e20aebcda944a101d5d425bf0b262 741 PIRSF PIRSF000460 1 741 1.4E-204 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2937 1f4e20aebcda944a101d5d425bf0b262 741 Gene3D G3DSA:3.40.50.2000 397 722 0.0 T 14-10-2018 BD65_2937 1f4e20aebcda944a101d5d425bf0b262 741 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 1 736 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2937 1f4e20aebcda944a101d5d425bf0b262 741 SUPERFAMILY SSF53756 1 737 1.33E-275 T 14-10-2018 BD65_2937 1f4e20aebcda944a101d5d425bf0b262 741 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 582 594 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2937 1f4e20aebcda944a101d5d425bf0b262 741 Pfam PF00343 Carbohydrate phosphorylase 26 736 6.0E-303 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 389 3.1E-84 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 Gene3D G3DSA:3.40.50.1220 212 337 7.7E-46 T 14-10-2018 BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 554 32.185 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 431 4.3E-138 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 Gene3D G3DSA:3.40.50.970 1 196 3.7E-59 T 14-10-2018 BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 423 536 2.4E-8 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 169 1.4E-28 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 SUPERFAMILY SSF52518 7 177 3.27E-31 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 Gene3D G3DSA:3.40.50.970 353 557 4.2E-61 T 14-10-2018 BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 PIRSF PIRSF004983 1 557 7.2E-178 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BD65_831 2e4e0fd1a477769307b650306dd8bf9d 557 SUPERFAMILY SSF52518 364 552 4.61E-33 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_3127 6484ed70c5a63fbe1ab66c04f4d757f9 174 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 47 55 - T 14-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 BD65_3127 6484ed70c5a63fbe1ab66c04f4d757f9 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 87 110 2.0E-35 T 14-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 BD65_3127 6484ed70c5a63fbe1ab66c04f4d757f9 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 135 156 2.0E-35 T 14-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 BD65_3127 6484ed70c5a63fbe1ab66c04f4d757f9 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 162 173 2.0E-35 T 14-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 BD65_3127 6484ed70c5a63fbe1ab66c04f4d757f9 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 46 58 2.0E-35 T 14-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 BD65_3127 6484ed70c5a63fbe1ab66c04f4d757f9 174 Pfam PF13505 Outer membrane protein beta-barrel domain 10 174 2.0E-20 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel BD65_3127 6484ed70c5a63fbe1ab66c04f4d757f9 174 SUPERFAMILY SSF56925 28 174 1.54E-28 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BD65_3127 6484ed70c5a63fbe1ab66c04f4d757f9 174 Gene3D G3DSA:2.40.160.20 25 174 1.0E-48 T 14-10-2018 BD65_3065 8a1482218399f988f6937b617587ff53 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 220 6.9E-75 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 BD65_3065 8a1482218399f988f6937b617587ff53 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 220 2.3E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_3065 8a1482218399f988f6937b617587ff53 231 SUPERFAMILY SSF161098 5 219 1.57E-50 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3065 8a1482218399f988f6937b617587ff53 231 Gene3D G3DSA:1.10.3720.10 2 225 4.8E-63 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3252 29e3a2e96dc3a64877e9019be85979ff 60 Pfam PF03966 Trm112p-like protein 2 41 1.6E-9 T 14-10-2018 IPR005651 Trm112-like BD65_3252 29e3a2e96dc3a64877e9019be85979ff 60 Gene3D G3DSA:2.20.25.10 8 60 2.4E-23 T 14-10-2018 BD65_3252 29e3a2e96dc3a64877e9019be85979ff 60 SUPERFAMILY SSF158997 1 54 6.15E-20 T 14-10-2018 BD65_3252 29e3a2e96dc3a64877e9019be85979ff 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.895 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 BD65_1335 7fabd8cefb749edbba70b09767a666e8 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 312 5.9E-78 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BD65_1335 7fabd8cefb749edbba70b09767a666e8 330 Gene3D G3DSA:3.40.50.1100 14 317 4.5E-124 T 14-10-2018 BD65_1335 7fabd8cefb749edbba70b09767a666e8 330 SUPERFAMILY SSF53686 10 320 1.96E-92 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BD65_1335 7fabd8cefb749edbba70b09767a666e8 330 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 2.4E-117 T 14-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BD65_1335 7fabd8cefb749edbba70b09767a666e8 330 Gene3D G3DSA:3.40.50.1100 57 153 4.5E-124 T 14-10-2018 BD65_1335 7fabd8cefb749edbba70b09767a666e8 330 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BD65_3229 f94af34782539d0767d359ec962498bb 164 SMART SM00344 12 121 1.1E-50 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BD65_3229 f94af34782539d0767d359ec962498bb 164 Gene3D G3DSA:1.10.10.10 1 63 1.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_3229 f94af34782539d0767d359ec962498bb 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 4.3E-21 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BD65_3229 f94af34782539d0767d359ec962498bb 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 4.3E-21 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BD65_3229 f94af34782539d0767d359ec962498bb 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 4.3E-21 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BD65_3229 f94af34782539d0767d359ec962498bb 164 SUPERFAMILY SSF54909 75 157 1.88E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BD65_3229 f94af34782539d0767d359ec962498bb 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 3.8E-20 T 14-10-2018 BD65_3229 f94af34782539d0767d359ec962498bb 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 7.5E-25 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BD65_3229 f94af34782539d0767d359ec962498bb 164 Gene3D G3DSA:3.30.70.920 64 159 1.2E-24 T 14-10-2018 BD65_3229 f94af34782539d0767d359ec962498bb 164 SUPERFAMILY SSF46785 12 70 2.59E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_826 fa1fd719a2c718263df08003b6db71f9 479 SMART SM01060 8 392 5.0E-281 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 PRINTS PR00067 Catalase signature 105 122 5.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 PRINTS PR00067 Catalase signature 289 316 5.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 PRINTS PR00067 Catalase signature 21 44 5.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 PRINTS PR00067 Catalase signature 124 142 5.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 PRINTS PR00067 Catalase signature 84 102 5.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 PRINTS PR00067 Catalase signature 321 347 5.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 Gene3D G3DSA:2.40.180.10 2 479 4.0E-232 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 SUPERFAMILY SSF56634 4 478 9.55E-210 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 Pfam PF00199 Catalase 8 388 4.1E-188 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 Pfam PF06628 Catalase-related immune-responsive 415 476 1.3E-19 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_826 fa1fd719a2c718263df08003b6db71f9 479 PIRSF PIRSF038928 1 479 9.1E-220 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_2323 e1597dc3dbc036674fddab6109124c89 443 Pfam PF01595 Domain of unknown function DUF21 6 197 8.7E-38 T 14-10-2018 IPR002550 CNNM, transmembrane domain BD65_2323 e1597dc3dbc036674fddab6109124c89 443 Gene3D G3DSA:3.10.580.10 193 346 2.8E-33 T 14-10-2018 BD65_2323 e1597dc3dbc036674fddab6109124c89 443 Pfam PF03471 Transporter associated domain 347 425 3.5E-21 T 14-10-2018 IPR005170 Transporter-associated domain BD65_2323 e1597dc3dbc036674fddab6109124c89 443 SUPERFAMILY SSF56176 344 429 8.72E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BD65_2323 e1597dc3dbc036674fddab6109124c89 443 SUPERFAMILY SSF54631 200 335 7.55E-21 T 14-10-2018 BD65_2323 e1597dc3dbc036674fddab6109124c89 443 Gene3D G3DSA:3.30.465.10 347 428 1.1E-29 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BD65_2323 e1597dc3dbc036674fddab6109124c89 443 SMART SM00116 221 270 0.59 T 14-10-2018 IPR000644 CBS domain BD65_2323 e1597dc3dbc036674fddab6109124c89 443 SMART SM00116 285 333 10.0 T 14-10-2018 IPR000644 CBS domain BD65_2323 e1597dc3dbc036674fddab6109124c89 443 SMART SM01091 346 426 6.6E-28 T 14-10-2018 IPR005170 Transporter-associated domain BD65_2323 e1597dc3dbc036674fddab6109124c89 443 Pfam PF00571 CBS domain 287 333 0.003 T 14-10-2018 IPR000644 CBS domain BD65_2943 a6eee9154ed114b150ef692683135315 608 SUPERFAMILY SSF53448 111 462 9.0E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2943 a6eee9154ed114b150ef692683135315 608 Gene3D G3DSA:3.90.550.10 99 320 3.2E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2943 a6eee9154ed114b150ef692683135315 608 Pfam PF00535 Glycosyl transferase family 2 113 305 2.5E-20 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BD65_152 fa6db3cd5343e175aacf5e4ee93a40d6 567 TIGRFAM TIGR00815 sulP: sulfate permease 18 558 8.6E-135 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 BD65_152 fa6db3cd5343e175aacf5e4ee93a40d6 567 Gene3D G3DSA:3.30.750.24 446 562 1.8E-21 T 14-10-2018 IPR036513 STAS domain superfamily BD65_152 fa6db3cd5343e175aacf5e4ee93a40d6 567 Pfam PF00916 Sulfate permease family 29 414 3.2E-83 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BD65_152 fa6db3cd5343e175aacf5e4ee93a40d6 567 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 14-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 BD65_152 fa6db3cd5343e175aacf5e4ee93a40d6 567 Pfam PF01740 STAS domain 460 558 1.3E-9 T 14-10-2018 IPR002645 STAS domain BD65_152 fa6db3cd5343e175aacf5e4ee93a40d6 567 SUPERFAMILY SSF52091 460 564 1.96E-14 T 14-10-2018 IPR036513 STAS domain superfamily BD65_1199 7369172398d0ae2fdd3f22a7333c98f1 130 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.125 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 BD65_1199 7369172398d0ae2fdd3f22a7333c98f1 130 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 7.9E-55 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 BD65_1199 7369172398d0ae2fdd3f22a7333c98f1 130 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 1.0E-63 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 BD65_1926 d73fa70566febd462233f595b3d73262 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.1E-66 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_1926 d73fa70566febd462233f595b3d73262 213 SUPERFAMILY SSF53271 2 212 2.56E-49 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BD65_1926 d73fa70566febd462233f595b3d73262 213 Pfam PF00156 Phosphoribosyl transferase domain 51 159 1.0E-11 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BD65_1926 d73fa70566febd462233f595b3d73262 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.817 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_1926 d73fa70566febd462233f595b3d73262 213 Gene3D G3DSA:3.40.50.2020 1 213 6.1E-77 T 14-10-2018 BD65_2966 5ef68396a3674e663b42113000855160 631 Gene3D G3DSA:3.30.1390.30 86 161 3.3E-51 T 14-10-2018 BD65_2966 5ef68396a3674e663b42113000855160 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 610 9.9E-239 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_2966 5ef68396a3674e663b42113000855160 631 Gene3D G3DSA:3.90.1310.10 65 248 3.3E-51 T 14-10-2018 BD65_2966 5ef68396a3674e663b42113000855160 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 7.5E-47 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BD65_2966 5ef68396a3674e663b42113000855160 631 Gene3D G3DSA:3.40.710.10 249 619 2.2E-94 T 14-10-2018 BD65_2966 5ef68396a3674e663b42113000855160 631 SUPERFAMILY SSF56601 255 610 3.82E-92 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_2966 5ef68396a3674e663b42113000855160 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 4.7E-87 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BD65_2966 5ef68396a3674e663b42113000855160 631 SUPERFAMILY SSF56519 57 254 1.2E-53 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BD65_2966 5ef68396a3674e663b42113000855160 631 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 614 53.114 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 SUPERFAMILY SSF46689 4 98 5.38E-27 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-35 T 14-10-2018 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 5.1E-34 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 5.1E-34 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 5.1E-34 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 5.1E-34 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.512 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_1560 b35aa6e9977e10a02a1243efe8e50ad3 98 PIRSF PIRSF002097 1 98 6.8E-46 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BD65_2028 6d141eeeb34cde017b194abe2b120442 219 PRINTS PR01021 OMPA domain signature 146 161 8.8E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BD65_2028 6d141eeeb34cde017b194abe2b120442 219 PRINTS PR01021 OMPA domain signature 116 138 8.8E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BD65_2028 6d141eeeb34cde017b194abe2b120442 219 PRINTS PR01021 OMPA domain signature 161 177 8.8E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BD65_2028 6d141eeeb34cde017b194abe2b120442 219 Pfam PF00691 OmpA family 115 210 3.5E-21 T 14-10-2018 IPR006665 OmpA-like domain BD65_2028 6d141eeeb34cde017b194abe2b120442 219 Gene3D G3DSA:3.30.1330.60 79 219 1.3E-51 T 14-10-2018 IPR036737 OmpA-like domain superfamily BD65_2028 6d141eeeb34cde017b194abe2b120442 219 Pfam PF13488 Glycine zipper 38 85 4.7E-11 T 14-10-2018 IPR039567 Glycine zipper domain BD65_2028 6d141eeeb34cde017b194abe2b120442 219 SUPERFAMILY SSF103088 103 218 9.94E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily BD65_2028 6d141eeeb34cde017b194abe2b120442 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 5.6E-6 T 14-10-2018 BD65_2028 6d141eeeb34cde017b194abe2b120442 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 5.6E-6 T 14-10-2018 BD65_2028 6d141eeeb34cde017b194abe2b120442 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 5.6E-6 T 14-10-2018 BD65_2028 6d141eeeb34cde017b194abe2b120442 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 5.6E-6 T 14-10-2018 BD65_1909 f919c1d485fa787e81c9aeec0ffc18db 457 Gene3D G3DSA:2.70.70.10 317 457 1.5E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif BD65_1909 f919c1d485fa787e81c9aeec0ffc18db 457 Pfam PF01551 Peptidase family M23 358 451 1.1E-25 T 14-10-2018 IPR016047 Peptidase M23 BD65_1909 f919c1d485fa787e81c9aeec0ffc18db 457 SUPERFAMILY SSF51261 284 455 3.27E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif BD65_1674 d7a6de1511cef2bf3ca31c689feb3d10 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 202 9.6E-75 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal BD65_1674 d7a6de1511cef2bf3ca31c689feb3d10 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 9.9E-29 T 14-10-2018 IPR001498 Impact, N-terminal BD65_1674 d7a6de1511cef2bf3ca31c689feb3d10 204 Gene3D G3DSA:3.30.70.240 135 204 2.1E-27 T 14-10-2018 BD65_1674 d7a6de1511cef2bf3ca31c689feb3d10 204 SUPERFAMILY SSF54980 137 203 7.91E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like BD65_1674 d7a6de1511cef2bf3ca31c689feb3d10 204 Gene3D G3DSA:3.30.230.30 1 134 4.4E-53 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily BD65_1674 d7a6de1511cef2bf3ca31c689feb3d10 204 SUPERFAMILY SSF54211 2 130 5.69E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_1674 d7a6de1511cef2bf3ca31c689feb3d10 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site BD65_1674 d7a6de1511cef2bf3ca31c689feb3d10 204 Pfam PF09186 Domain of unknown function (DUF1949) 142 195 1.3E-12 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BD65_1279 34fca5be693b9f34f9416207cfbb4d7a 383 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 283 296 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 BD65_1279 34fca5be693b9f34f9416207cfbb4d7a 383 Pfam PF01494 FAD binding domain 37 334 4.0E-18 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 BD65_1279 34fca5be693b9f34f9416207cfbb4d7a 383 SUPERFAMILY SSF51905 1 373 2.77E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1279 34fca5be693b9f34f9416207cfbb4d7a 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 6.4E-8 T 14-10-2018 BD65_1279 34fca5be693b9f34f9416207cfbb4d7a 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 145 160 6.4E-8 T 14-10-2018 BD65_1279 34fca5be693b9f34f9416207cfbb4d7a 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 6.4E-8 T 14-10-2018 BD65_1279 34fca5be693b9f34f9416207cfbb4d7a 383 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 1 379 2.3E-141 T 14-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 BD65_1279 34fca5be693b9f34f9416207cfbb4d7a 383 Gene3D G3DSA:3.30.9.50 69 258 1.8E-91 T 14-10-2018 BD65_1279 34fca5be693b9f34f9416207cfbb4d7a 383 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 1 379 1.5E-125 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BD65_1279 34fca5be693b9f34f9416207cfbb4d7a 383 Gene3D G3DSA:3.50.50.60 1 327 1.8E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2096 4ef788ae8c637c282ea9fbf72980bbca 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_2096 4ef788ae8c637c282ea9fbf72980bbca 312 Pfam PF03466 LysR substrate binding domain 92 296 9.0E-36 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_2096 4ef788ae8c637c282ea9fbf72980bbca 312 SUPERFAMILY SSF53850 93 300 1.12E-39 T 14-10-2018 BD65_2096 4ef788ae8c637c282ea9fbf72980bbca 312 Gene3D G3DSA:1.10.10.10 5 88 1.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2096 4ef788ae8c637c282ea9fbf72980bbca 312 Gene3D G3DSA:3.40.190.10 94 294 2.1E-51 T 14-10-2018 BD65_2096 4ef788ae8c637c282ea9fbf72980bbca 312 Gene3D G3DSA:3.40.190.10 166 267 2.1E-51 T 14-10-2018 BD65_2096 4ef788ae8c637c282ea9fbf72980bbca 312 SUPERFAMILY SSF46785 5 114 2.27E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2045 df0a2e6ac8def6b87307dde5516c0a42 118 Gene3D G3DSA:3.30.1370.150 59 118 5.3E-33 T 14-10-2018 BD65_2045 df0a2e6ac8def6b87307dde5516c0a42 118 Pfam PF10928 Protein of unknown function (DUF2810) 64 116 5.6E-32 T 14-10-2018 IPR021230 Protein of unknown function DUF2810 BD65_2045 df0a2e6ac8def6b87307dde5516c0a42 118 Gene3D G3DSA:4.10.860.10 1 58 1.3E-12 T 14-10-2018 BD65_992 5f924beb79c44a767a387253c84fc215 118 Gene3D G3DSA:3.40.30.10 1 118 6.0E-47 T 14-10-2018 BD65_992 5f924beb79c44a767a387253c84fc215 118 Pfam PF03960 ArsC family 8 117 1.9E-21 T 14-10-2018 IPR006660 Arsenate reductase-like BD65_992 5f924beb79c44a767a387253c84fc215 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 7 118 6.7E-45 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 BD65_992 5f924beb79c44a767a387253c84fc215 118 SUPERFAMILY SSF52833 6 118 3.63E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_3041 9b575ad0886eefdfa1c7ea7fbc6e9896 228 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 4 224 43.25 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 BD65_3041 9b575ad0886eefdfa1c7ea7fbc6e9896 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 4.9E-93 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 BD65_3041 9b575ad0886eefdfa1c7ea7fbc6e9896 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 5.3E-41 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BD65_512 286db734c8b586b0cb034974043c7c4e 221 SUPERFAMILY SSF56784 6 217 6.7E-51 T 14-10-2018 IPR036412 HAD-like superfamily BD65_512 286db734c8b586b0cb034974043c7c4e 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 190 3.4E-28 T 14-10-2018 BD65_512 286db734c8b586b0cb034974043c7c4e 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.8E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_512 286db734c8b586b0cb034974043c7c4e 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.8E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_512 286db734c8b586b0cb034974043c7c4e 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.8E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_512 286db734c8b586b0cb034974043c7c4e 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 62 191 8.2E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_512 286db734c8b586b0cb034974043c7c4e 221 Gene3D G3DSA:1.10.150.240 20 91 1.3E-58 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BD65_512 286db734c8b586b0cb034974043c7c4e 221 Gene3D G3DSA:3.40.50.1000 10 202 1.3E-58 T 14-10-2018 IPR023214 HAD superfamily BD65_1408 1f305926559c7b0d34f39b665059bbc5 122 Gene3D G3DSA:3.30.450.20 27 122 1.7E-47 T 14-10-2018 BD65_1408 1f305926559c7b0d34f39b665059bbc5 122 SUPERFAMILY SSF143737 15 119 4.97E-50 T 14-10-2018 IPR038025 Antitoxin CbeA superfamily BD65_1408 1f305926559c7b0d34f39b665059bbc5 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 7.9E-49 T 14-10-2018 IPR009320 Antitoxin CbeA GO:0051495 BD65_609 87d0ef0794a85e11ab8cac6f83ba0cd1 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 20 112 8.5E-33 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BD65_609 87d0ef0794a85e11ab8cac6f83ba0cd1 115 Gene3D G3DSA:1.20.58.280 14 115 3.9E-36 T 14-10-2018 BD65_609 87d0ef0794a85e11ab8cac6f83ba0cd1 115 SUPERFAMILY SSF46973 17 113 1.57E-33 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 BD65_609 87d0ef0794a85e11ab8cac6f83ba0cd1 115 PIRSF PIRSF000699 10 115 1.2E-37 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BD65_75 94308dbeb46cf86295f092bcb17cae93 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 400 5.4E-138 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 BD65_75 94308dbeb46cf86295f092bcb17cae93 400 Pfam PF02687 FtsX-like permease family 297 393 1.1E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BD65_75 94308dbeb46cf86295f092bcb17cae93 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 7.8E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain BD65_978 14cbde07a42a71d77ade8f9e6a47f22f 127 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 11 122 1.7E-37 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR BD65_978 14cbde07a42a71d77ade8f9e6a47f22f 127 SUPERFAMILY SSF52833 11 123 4.35E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_978 14cbde07a42a71d77ade8f9e6a47f22f 127 Gene3D G3DSA:3.40.30.10 9 124 7.3E-41 T 14-10-2018 BD65_978 14cbde07a42a71d77ade8f9e6a47f22f 127 Pfam PF03960 ArsC family 13 122 5.5E-15 T 14-10-2018 IPR006660 Arsenate reductase-like BD65_1466 06e8623a2115de345ca86213874cd1a0 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 1.6E-27 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 BD65_1466 06e8623a2115de345ca86213874cd1a0 483 SUPERFAMILY SSF51735 2 264 1.3E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1466 06e8623a2115de345ca86213874cd1a0 483 Gene3D G3DSA:3.40.50.720 3 267 1.7E-48 T 14-10-2018 BD65_1466 06e8623a2115de345ca86213874cd1a0 483 SUPERFAMILY SSF48179 273 480 4.42E-52 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_1466 06e8623a2115de345ca86213874cd1a0 483 Gene3D G3DSA:1.10.1040.10 272 483 1.7E-61 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BD65_1466 06e8623a2115de345ca86213874cd1a0 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 458 3.8E-72 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 BD65_2240 6565029912b57e9ad9bcb3d9fdbf3b69 315 Gene3D G3DSA:3.40.50.170 1 209 1.5E-87 T 14-10-2018 BD65_2240 6565029912b57e9ad9bcb3d9fdbf3b69 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.9E-31 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_2240 6565029912b57e9ad9bcb3d9fdbf3b69 315 SUPERFAMILY SSF50486 208 310 1.08E-35 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 BD65_2240 6565029912b57e9ad9bcb3d9fdbf3b69 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 36.987 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BD65_2240 6565029912b57e9ad9bcb3d9fdbf3b69 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 5.8E-113 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BD65_2240 6565029912b57e9ad9bcb3d9fdbf3b69 315 SUPERFAMILY SSF53328 5 207 9.81E-67 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_2240 6565029912b57e9ad9bcb3d9fdbf3b69 315 Gene3D G3DSA:3.10.25.10 210 315 4.9E-39 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_2240 6565029912b57e9ad9bcb3d9fdbf3b69 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_2240 6565029912b57e9ad9bcb3d9fdbf3b69 315 Pfam PF00551 Formyl transferase 7 183 1.3E-53 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 SUPERFAMILY SSF55681 98 464 1.44E-96 T 14-10-2018 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 Gene3D G3DSA:3.30.930.10 109 465 9.4E-110 T 14-10-2018 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 SUPERFAMILY SSF50249 15 102 1.43E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.519 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 Gene3D G3DSA:2.40.50.140 2 104 3.2E-21 T 14-10-2018 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 4.3E-83 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.7E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BD65_3266 585947e61b6bc9e2512460f6a01251e1 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 4.6E-209 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BD65_2049 efd0d94af62793a5ff9c77de4979e358 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 13 274 32.828 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BD65_2049 efd0d94af62793a5ff9c77de4979e358 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 274 3.5E-88 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BD65_2049 efd0d94af62793a5ff9c77de4979e358 276 Pfam PF02634 FdhD/NarQ family 38 273 3.6E-71 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BD65_2049 efd0d94af62793a5ff9c77de4979e358 276 SUPERFAMILY SSF53927 24 274 3.91E-79 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BD65_2049 efd0d94af62793a5ff9c77de4979e358 276 PIRSF PIRSF015626 5 276 1.9E-78 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BD65_2049 efd0d94af62793a5ff9c77de4979e358 276 Gene3D G3DSA:3.40.140.10 128 276 5.0E-45 T 14-10-2018 BD65_2049 efd0d94af62793a5ff9c77de4979e358 276 Gene3D G3DSA:3.10.20.10 40 125 4.0E-10 T 14-10-2018 BD65_1441 feb844341953b688cce54b1b795843a7 87 Pfam PF01527 Transposase 2 70 6.0E-22 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_1441 feb844341953b688cce54b1b795843a7 87 SUPERFAMILY SSF46689 1 68 6.81E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1701 aeab74f4f0efcee6b3e6e66f57107c73 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 276 1.8E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1701 aeab74f4f0efcee6b3e6e66f57107c73 281 Gene3D G3DSA:1.10.3720.10 2 274 1.7E-52 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1701 aeab74f4f0efcee6b3e6e66f57107c73 281 SUPERFAMILY SSF161098 4 277 6.92E-58 T 14-10-2018 IPR035906 MetI-like superfamily BD65_170 224c1dc567702e55c87d980f2e03b422 158 Pfam PF12582 Protein of unknown function (DUF3757) 26 149 1.8E-16 T 14-10-2018 IPR022231 Protein of unknown function DUF3757 BD65_2391 f3483d7e5acc380ff21dfb8e2be405c7 149 Gene3D G3DSA:3.40.50.10110 1 146 1.2E-51 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily BD65_2391 f3483d7e5acc380ff21dfb8e2be405c7 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 3.1E-39 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 BD65_2391 f3483d7e5acc380ff21dfb8e2be405c7 149 SUPERFAMILY SSF102400 1 143 4.58E-47 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily BD65_1260 b03985c1a876a62bbfbfb544ca47a9bf 381 Pfam PF02405 Permease MlaE 165 374 4.4E-67 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 BD65_1260 b03985c1a876a62bbfbfb544ca47a9bf 381 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 134 377 2.2E-71 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BD65_431 cf36b3f1e42010791ba331326da5bc20 298 Gene3D G3DSA:3.20.20.100 2 298 5.4E-107 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BD65_431 cf36b3f1e42010791ba331326da5bc20 298 Pfam PF00248 Aldo/keto reductase family 17 291 3.1E-57 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain BD65_431 cf36b3f1e42010791ba331326da5bc20 298 SUPERFAMILY SSF51430 7 295 3.14E-71 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BD65_431 cf36b3f1e42010791ba331326da5bc20 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 7.6E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BD65_431 cf36b3f1e42010791ba331326da5bc20 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 7.6E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BD65_866 8015f210e9f60c8ee0c72a5c8e0fd80f 260 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_866 8015f210e9f60c8ee0c72a5c8e0fd80f 260 PIRSF PIRSF039085 5 260 1.8E-119 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BD65_866 8015f210e9f60c8ee0c72a5c8e0fd80f 260 Pfam PF00005 ABC transporter 24 184 2.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_866 8015f210e9f60c8ee0c72a5c8e0fd80f 260 Gene3D G3DSA:3.40.50.300 4 259 3.9E-84 T 14-10-2018 BD65_866 8015f210e9f60c8ee0c72a5c8e0fd80f 260 SUPERFAMILY SSF52540 10 254 1.16E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_866 8015f210e9f60c8ee0c72a5c8e0fd80f 260 SMART SM00382 33 232 6.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1615 fdb1d281636610f8cf6a192f8732c358 356 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 112 242 2.7E-9 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain BD65_1615 fdb1d281636610f8cf6a192f8732c358 356 Pfam PF17482 Phage tail sheath C-terminal domain 245 350 8.8E-13 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain BD65_1337 cf91bc0e4c71e2a0fd6fa613c0aa1102 497 SUPERFAMILY SSF56801 4 493 6.93E-113 T 14-10-2018 BD65_1337 cf91bc0e4c71e2a0fd6fa613c0aa1102 497 Pfam PF00501 AMP-binding enzyme 10 394 5.9E-74 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_1337 cf91bc0e4c71e2a0fd6fa613c0aa1102 497 ProSitePatterns PS00455 Putative AMP-binding domain signature. 155 166 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_1337 cf91bc0e4c71e2a0fd6fa613c0aa1102 497 Gene3D G3DSA:3.40.50.12780 1 388 1.8E-98 T 14-10-2018 BD65_1337 cf91bc0e4c71e2a0fd6fa613c0aa1102 497 Gene3D G3DSA:3.30.300.30 391 496 4.0E-16 T 14-10-2018 BD65_2491 752b6348bd345496fb1adcfa2a347f17 238 SMART SM00862 156 232 1.8E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2491 752b6348bd345496fb1adcfa2a347f17 238 Pfam PF00072 Response regulator receiver domain 6 113 2.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2491 752b6348bd345496fb1adcfa2a347f17 238 SUPERFAMILY SSF52172 2 125 1.32E-35 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2491 752b6348bd345496fb1adcfa2a347f17 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 5.6E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2491 752b6348bd345496fb1adcfa2a347f17 238 SUPERFAMILY SSF46894 137 234 4.25E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2491 752b6348bd345496fb1adcfa2a347f17 238 Gene3D G3DSA:3.40.50.2300 1 123 8.7E-33 T 14-10-2018 BD65_2491 752b6348bd345496fb1adcfa2a347f17 238 SMART SM00448 4 114 2.6E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2491 752b6348bd345496fb1adcfa2a347f17 238 Gene3D G3DSA:1.10.10.10 126 236 1.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2508 e097555e2bf6d9cff63a4d3b42f51203 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.507 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BD65_2508 e097555e2bf6d9cff63a4d3b42f51203 169 Pfam PF01252 Signal peptidase (SPase) II 16 155 2.3E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BD65_2508 e097555e2bf6d9cff63a4d3b42f51203 169 TIGRFAM TIGR00077 lspA: signal peptidase II 2 159 1.4E-51 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BD65_2508 e097555e2bf6d9cff63a4d3b42f51203 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 6.4E-19 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BD65_2508 e097555e2bf6d9cff63a4d3b42f51203 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 6.4E-19 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BD65_2508 e097555e2bf6d9cff63a4d3b42f51203 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 6.4E-19 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BD65_2508 e097555e2bf6d9cff63a4d3b42f51203 169 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BD65_1197 a6ac1686ea398e904e903668fad73366 892 Pfam PF01966 HD domain 470 603 7.9E-15 T 14-10-2018 IPR006674 HD domain BD65_1197 a6ac1686ea398e904e903668fad73366 892 Gene3D G3DSA:3.30.70.260 814 887 6.0E-5 T 14-10-2018 BD65_1197 a6ac1686ea398e904e903668fad73366 892 SMART SM00471 466 613 1.6E-11 T 14-10-2018 IPR003607 HD/PDEase domain BD65_1197 a6ac1686ea398e904e903668fad73366 892 SUPERFAMILY SSF81593 205 330 2.35E-11 T 14-10-2018 BD65_1197 a6ac1686ea398e904e903668fad73366 892 Pfam PF01842 ACT domain 818 871 1.2E-8 T 14-10-2018 IPR002912 ACT domain BD65_1197 a6ac1686ea398e904e903668fad73366 892 SUPERFAMILY SSF81301 49 191 1.6E-21 T 14-10-2018 BD65_1197 a6ac1686ea398e904e903668fad73366 892 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 892 345.931 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BD65_1197 a6ac1686ea398e904e903668fad73366 892 Pfam PF08335 GlnD PII-uridylyltransferase 195 333 5.4E-37 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BD65_1197 a6ac1686ea398e904e903668fad73366 892 PIRSF PIRSF006288 28 892 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BD65_1197 a6ac1686ea398e904e903668fad73366 892 SUPERFAMILY SSF55021 707 775 2.82E-9 T 14-10-2018 BD65_1197 a6ac1686ea398e904e903668fad73366 892 Gene3D G3DSA:1.10.3210.10 460 574 1.7E-7 T 14-10-2018 BD65_1197 a6ac1686ea398e904e903668fad73366 892 SUPERFAMILY SSF55021 814 879 9.16E-10 T 14-10-2018 BD65_1197 a6ac1686ea398e904e903668fad73366 892 Pfam PF01909 Nucleotidyltransferase domain 89 145 4.9E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 BD65_1197 a6ac1686ea398e904e903668fad73366 892 SUPERFAMILY SSF109604 459 561 1.41E-12 T 14-10-2018 BD65_1197 a6ac1686ea398e904e903668fad73366 892 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 51 886 5.1E-302 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 Gene3D G3DSA:1.10.274.10 21 146 5.9E-83 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 SUPERFAMILY SSF47831 23 143 1.7E-34 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.2E-30 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 8.2E-23 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 PIRSF PIRSF000732 1 574 7.8E-218 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 3.4E-258 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 SUPERFAMILY SSF52009 125 246 1.96E-36 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.5E-31 T 14-10-2018 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.5E-31 T 14-10-2018 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.5E-31 T 14-10-2018 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.5E-31 T 14-10-2018 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 Gene3D G3DSA:3.20.20.60 234 575 6.1E-127 T 14-10-2018 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 541 8.8E-124 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 SUPERFAMILY SSF51621 252 549 7.07E-110 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BD65_947 510d62ccb500fcf68ea870e4abdc2475 575 Gene3D G3DSA:3.50.30.10 4 233 5.9E-83 T 14-10-2018 BD65_128 a7edc3fa9ee625aa5bab9298cdd8c68a 406 SUPERFAMILY SSF51556 66 366 1.79E-82 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_128 a7edc3fa9ee625aa5bab9298cdd8c68a 406 SUPERFAMILY SSF51338 6 404 2.18E-25 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_128 a7edc3fa9ee625aa5bab9298cdd8c68a 406 Pfam PF01979 Amidohydrolase family 63 380 2.8E-17 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BD65_128 a7edc3fa9ee625aa5bab9298cdd8c68a 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 27 404 3.6E-154 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_128 a7edc3fa9ee625aa5bab9298cdd8c68a 406 Gene3D G3DSA:3.20.20.140 67 365 1.8E-157 T 14-10-2018 BD65_128 a7edc3fa9ee625aa5bab9298cdd8c68a 406 Gene3D G3DSA:2.30.40.10 14 402 1.8E-157 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_128 a7edc3fa9ee625aa5bab9298cdd8c68a 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 405 41.745 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_41 27874b393659a12d2bf6fae8088f61e2 350 Pfam PF01594 AI-2E family transporter 14 327 4.5E-70 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like BD65_950 e0904b1a0bb565312a9404a35c806994 364 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 5.1E-124 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 BD65_950 e0904b1a0bb565312a9404a35c806994 364 Gene3D G3DSA:3.40.50.300 2 271 2.1E-80 T 14-10-2018 BD65_950 e0904b1a0bb565312a9404a35c806994 364 Pfam PF00005 ABC transporter 18 164 1.5E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_950 e0904b1a0bb565312a9404a35c806994 364 SUPERFAMILY SSF50331 239 324 6.8E-9 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BD65_950 e0904b1a0bb565312a9404a35c806994 364 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_950 e0904b1a0bb565312a9404a35c806994 364 SUPERFAMILY SSF52540 3 244 8.28E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_950 e0904b1a0bb565312a9404a35c806994 364 SMART SM00382 27 214 2.9E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 Gene3D G3DSA:3.40.50.720 1 251 5.7E-82 T 14-10-2018 BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 2.3E-59 T 14-10-2018 BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 SUPERFAMILY SSF51735 3 250 8.3E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.0E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.0E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.0E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.0E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.0E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.0E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2444 27bab039d3d0f2b28bbc598de67070f1 251 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 4 251 5.0E-132 T 14-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 BD65_2222 78e47316732e9c3787390ae4e8659f37 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2222 78e47316732e9c3787390ae4e8659f37 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 32.049 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2222 78e47316732e9c3787390ae4e8659f37 130 Pfam PF00410 Ribosomal protein S8 5 129 2.5E-48 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2222 78e47316732e9c3787390ae4e8659f37 130 Gene3D G3DSA:3.30.1490.10 73 130 1.4E-25 T 14-10-2018 BD65_2222 78e47316732e9c3787390ae4e8659f37 130 Gene3D G3DSA:3.30.1370.30 2 72 2.7E-28 T 14-10-2018 BD65_2222 78e47316732e9c3787390ae4e8659f37 130 SUPERFAMILY SSF56047 5 129 3.66E-47 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 7.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 7.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 7.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 Pfam PF00106 short chain dehydrogenase 2 186 2.1E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 Gene3D G3DSA:3.40.50.720 1 235 8.7E-65 T 14-10-2018 BD65_339 d9ad17d8ad613b8bbd7799edfdb487d1 249 SUPERFAMILY SSF51735 2 231 8.38E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_40 cfe9682756a23169add4d63e5540cd6a 353 Pfam PF00581 Rhodanese-like domain 138 233 1.2E-14 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_40 cfe9682756a23169add4d63e5540cd6a 353 Gene3D G3DSA:3.40.250.10 124 270 1.3E-43 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_40 cfe9682756a23169add4d63e5540cd6a 353 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 38.356 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 BD65_40 cfe9682756a23169add4d63e5540cd6a 353 SMART SM00450 136 237 2.1E-26 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_40 cfe9682756a23169add4d63e5540cd6a 353 Gene3D G3DSA:3.30.70.100 13 118 2.9E-14 T 14-10-2018 BD65_40 cfe9682756a23169add4d63e5540cd6a 353 SUPERFAMILY SSF52821 117 255 1.96E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_40 cfe9682756a23169add4d63e5540cd6a 353 Pfam PF12368 Rhodanase C-terminal 246 308 1.4E-18 T 14-10-2018 IPR022111 Rhodanase, C-terminal BD65_2266 cc29cde132779341e892a29faa47164d 327 PIRSF PIRSF004911 1 327 6.4E-115 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BD65_2266 cc29cde132779341e892a29faa47164d 327 Pfam PF04055 Radical SAM superfamily 103 214 8.8E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_2266 cc29cde132779341e892a29faa47164d 327 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 2 320 7.3E-156 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like BD65_2266 cc29cde132779341e892a29faa47164d 327 Gene3D G3DSA:3.20.20.70 36 319 3.1E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2266 cc29cde132779341e892a29faa47164d 327 SUPERFAMILY SSF102114 87 309 3.4E-26 T 14-10-2018 BD65_2266 cc29cde132779341e892a29faa47164d 327 Pfam PF13394 4Fe-4S single cluster domain 102 181 7.0E-7 T 14-10-2018 BD65_2266 cc29cde132779341e892a29faa47164d 327 TIGRFAM TIGR00238 TIGR00238: KamA family protein 2 313 8.7E-129 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 9.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 9.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 9.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 SMART SM00448 2 115 2.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 SUPERFAMILY SSF52172 3 131 1.08E-32 T 14-10-2018 IPR011006 CheY-like superfamily BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 SUPERFAMILY SSF46894 135 210 2.14E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 Pfam PF00072 Response regulator receiver domain 4 116 2.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 SMART SM00421 146 203 2.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_649 aa030c61679f0f9b989b7fcaf2ddb659 218 Gene3D G3DSA:3.40.50.12740 2 209 1.2E-58 T 14-10-2018 BD65_2171 b08bde0da6075f9dd085eb0f73124b52 670 Gene3D G3DSA:2.40.170.20 176 670 1.4E-60 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BD65_2171 b08bde0da6075f9dd085eb0f73124b52 670 Gene3D G3DSA:2.170.130.10 57 169 8.4E-14 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BD65_2171 b08bde0da6075f9dd085eb0f73124b52 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 162 7.8E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BD65_2171 b08bde0da6075f9dd085eb0f73124b52 670 SUPERFAMILY SSF56935 49 670 1.07E-86 T 14-10-2018 BD65_2171 b08bde0da6075f9dd085eb0f73124b52 670 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 65 670 9.3E-244 T 14-10-2018 IPR010100 TonB-dependent copper receptor BD65_2171 b08bde0da6075f9dd085eb0f73124b52 670 Pfam PF00593 TonB dependent receptor 216 669 8.6E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BD65_1920 fbbf586ef666696b4990ee4251ee5023 55 Pfam PF00471 Ribosomal protein L33 7 53 8.8E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1920 fbbf586ef666696b4990ee4251ee5023 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1920 fbbf586ef666696b4990ee4251ee5023 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.908 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1920 fbbf586ef666696b4990ee4251ee5023 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 8.4E-28 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1920 fbbf586ef666696b4990ee4251ee5023 55 SUPERFAMILY SSF57829 1 53 3.72E-20 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BD65_1920 fbbf586ef666696b4990ee4251ee5023 55 Gene3D G3DSA:2.20.28.120 1 55 2.8E-31 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1196 ccc1c20e09428b81558fe36cec0086d9 263 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 7.6E-109 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BD65_1196 ccc1c20e09428b81558fe36cec0086d9 263 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BD65_1196 ccc1c20e09428b81558fe36cec0086d9 263 Pfam PF00557 Metallopeptidase family M24 12 242 4.3E-53 T 14-10-2018 IPR000994 Peptidase M24 BD65_1196 ccc1c20e09428b81558fe36cec0086d9 263 SUPERFAMILY SSF55920 3 255 1.96E-91 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like BD65_1196 ccc1c20e09428b81558fe36cec0086d9 263 Gene3D G3DSA:3.90.230.10 2 263 2.5E-118 T 14-10-2018 BD65_1196 ccc1c20e09428b81558fe36cec0086d9 263 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.583 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BD65_1196 ccc1c20e09428b81558fe36cec0086d9 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.5E-23 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BD65_1196 ccc1c20e09428b81558fe36cec0086d9 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.5E-23 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BD65_1196 ccc1c20e09428b81558fe36cec0086d9 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.5E-23 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BD65_1196 ccc1c20e09428b81558fe36cec0086d9 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.5E-23 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 SUPERFAMILY SSF51735 458 631 1.13E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 Gene3D G3DSA:3.40.1160.10 16 299 5.3E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 3.8E-22 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 PIRSF PIRSF000727 13 811 8.6E-289 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 Pfam PF00696 Amino acid kinase family 13 285 4.9E-42 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 Pfam PF00742 Homoserine dehydrogenase 609 804 3.4E-43 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 SUPERFAMILY SSF55347 609 792 1.18E-46 T 14-10-2018 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 SUPERFAMILY SSF53633 13 300 1.36E-57 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 Gene3D G3DSA:1.20.120.1320 52 146 5.3E-73 T 14-10-2018 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 454 7.8E-63 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 Gene3D G3DSA:3.30.360.10 620 790 2.7E-103 T 14-10-2018 BD65_1834 36a3a6433e830993d60a1bf0e5080e85 811 Gene3D G3DSA:3.40.50.720 461 807 2.7E-103 T 14-10-2018 BD65_413 5a85c6471bdc08db561e683517f897ee 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 8.3E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_413 5a85c6471bdc08db561e683517f897ee 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 5.4E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_413 5a85c6471bdc08db561e683517f897ee 330 Pfam PF00005 ABC transporter 24 187 1.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_413 5a85c6471bdc08db561e683517f897ee 330 SMART SM00382 32 235 6.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_413 5a85c6471bdc08db561e683517f897ee 330 Gene3D G3DSA:3.40.50.300 2 329 2.2E-77 T 14-10-2018 BD65_413 5a85c6471bdc08db561e683517f897ee 330 SUPERFAMILY SSF52540 3 266 1.74E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1889 ad47434bd752cd6a4d18cc01afe0a5ed 71 Gene3D G3DSA:1.20.120.910 3 69 5.8E-17 T 14-10-2018 BD65_1889 ad47434bd752cd6a4d18cc01afe0a5ed 71 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 31 64 6.1E-13 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BD65_1889 ad47434bd752cd6a4d18cc01afe0a5ed 71 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 34 58 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BD65_1889 ad47434bd752cd6a4d18cc01afe0a5ed 71 SUPERFAMILY SSF57716 33 70 2.28E-8 T 14-10-2018 BD65_1563 6690ababa05a1f23b93c9913df394dcb 213 Pfam PF00484 Carbonic anhydrase 34 188 2.2E-49 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BD65_1563 6690ababa05a1f23b93c9913df394dcb 213 SUPERFAMILY SSF53056 1 202 6.15E-66 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BD65_1563 6690ababa05a1f23b93c9913df394dcb 213 Gene3D G3DSA:3.40.1050.10 1 201 4.7E-70 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BD65_1563 6690ababa05a1f23b93c9913df394dcb 213 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BD65_1563 6690ababa05a1f23b93c9913df394dcb 213 SMART SM00947 27 193 7.1E-67 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BD65_1563 6690ababa05a1f23b93c9913df394dcb 213 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 PIRSF PIRSF000398 1 270 7.4E-65 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 5.0E-19 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 5.0E-19 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 5.0E-19 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 5.0E-19 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 5.6E-96 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 5.1E-74 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 SUPERFAMILY SSF53335 5 268 6.09E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 Gene3D G3DSA:1.10.1020.10 57 156 2.2E-86 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 BD65_2160 ee55f9bf18c1f29a6bc00940f4d5acb4 270 Gene3D G3DSA:3.40.50.150 7 239 2.2E-86 T 14-10-2018 BD65_3052 6c44aa5c924204570f602f088ae84456 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_3052 6c44aa5c924204570f602f088ae84456 202 SMART SM00448 2 115 1.8E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_3052 6c44aa5c924204570f602f088ae84456 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 3.9E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_3052 6c44aa5c924204570f602f088ae84456 202 SMART SM00421 140 197 1.7E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_3052 6c44aa5c924204570f602f088ae84456 202 SUPERFAMILY SSF46894 135 199 6.12E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_3052 6c44aa5c924204570f602f088ae84456 202 Pfam PF00072 Response regulator receiver domain 5 115 1.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_3052 6c44aa5c924204570f602f088ae84456 202 Gene3D G3DSA:3.40.50.12740 3 200 6.3E-48 T 14-10-2018 BD65_3052 6c44aa5c924204570f602f088ae84456 202 SUPERFAMILY SSF52172 1 129 3.98E-28 T 14-10-2018 IPR011006 CheY-like superfamily BD65_3052 6c44aa5c924204570f602f088ae84456 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 4.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_3052 6c44aa5c924204570f602f088ae84456 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 4.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_3052 6c44aa5c924204570f602f088ae84456 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 4.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 Pfam PF00149 Calcineurin-like phosphoesterase 25 243 5.3E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 SUPERFAMILY SSF56300 17 323 6.51E-74 T 14-10-2018 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 SUPERFAMILY SSF55816 336 547 1.31E-23 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 Gene3D G3DSA:3.60.21.10 17 322 4.7E-75 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 Gene3D G3DSA:3.90.780.10 326 541 8.1E-30 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 ProSitePatterns PS00785 5'-nucleotidase signature 1. 24 36 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 PRINTS PR01607 Apyrase family signature 253 273 4.5E-11 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 PRINTS PR01607 Apyrase family signature 22 40 4.5E-11 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 PRINTS PR01607 Apyrase family signature 199 216 4.5E-11 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 PRINTS PR01607 Apyrase family signature 226 249 4.5E-11 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 ProSitePatterns PS00786 5'-nucleotidase signature 2. 103 114 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_3035 c345fe20d856fda4efa273b3e63376a4 632 Pfam PF02872 5'-nucleotidase, C-terminal domain 338 488 5.9E-20 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 Gene3D G3DSA:1.10.1520.10 4 148 1.3E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 Pfam PF14622 Ribonuclease-III-like 20 140 3.0E-34 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 SUPERFAMILY SSF54768 109 223 2.99E-27 T 14-10-2018 BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.891 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 SUPERFAMILY SSF69065 5 159 1.29E-49 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 SMART SM00358 156 224 2.2E-23 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 5.2E-74 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 2.7E-14 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 Gene3D G3DSA:3.30.160.20 154 224 2.6E-20 T 14-10-2018 BD65_1082 e206d69c3bf677fda7ffacd7e040864c 226 SMART SM00535 21 149 8.7E-59 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BD65_2334 67c41d8c23134321457c0a8a1780b2e4 115 SUPERFAMILY SSF46955 3 67 1.28E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BD65_2334 67c41d8c23134321457c0a8a1780b2e4 115 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 9 114 2.0E-4 T 14-10-2018 IPR010749 Protein of unknown function DUF1323 BD65_2334 67c41d8c23134321457c0a8a1780b2e4 115 Gene3D G3DSA:1.10.10.10 2 73 3.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2334 67c41d8c23134321457c0a8a1780b2e4 115 Pfam PF02316 Mu DNA-binding domain 9 55 2.6E-13 T 14-10-2018 IPR003314 Mu-type HTH domain GO:0003677 BD65_3102 b75b80e9ff9f3bde8e4517cf17cd00f4 277 SMART SM00382 49 270 8.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3102 b75b80e9ff9f3bde8e4517cf17cd00f4 277 Pfam PF00005 ABC transporter 40 201 1.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3102 b75b80e9ff9f3bde8e4517cf17cd00f4 277 SUPERFAMILY SSF52540 23 261 7.69E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3102 b75b80e9ff9f3bde8e4517cf17cd00f4 277 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 23 268 6.3E-90 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 BD65_3102 b75b80e9ff9f3bde8e4517cf17cd00f4 277 Gene3D G3DSA:3.40.50.300 6 272 2.4E-61 T 14-10-2018 BD65_3102 b75b80e9ff9f3bde8e4517cf17cd00f4 277 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_287 ddddd196075e871f9199cbc5e046dbac 303 SMART SM00481 14 81 1.1E-15 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BD65_287 ddddd196075e871f9199cbc5e046dbac 303 Gene3D G3DSA:3.20.20.140 15 261 8.2E-79 T 14-10-2018 BD65_287 ddddd196075e871f9199cbc5e046dbac 303 Gene3D G3DSA:1.10.150.650 109 180 8.2E-79 T 14-10-2018 BD65_287 ddddd196075e871f9199cbc5e046dbac 303 SUPERFAMILY SSF89550 13 286 5.49E-50 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BD65_287 ddddd196075e871f9199cbc5e046dbac 303 Pfam PF02811 PHP domain 15 143 1.1E-8 T 14-10-2018 IPR004013 PHP domain GO:0003824 BD65_3107 9b8a4dda51a1b27275bd42e6cb0d43ef 283 Gene3D G3DSA:3.40.250.10 153 276 4.7E-42 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_3107 9b8a4dda51a1b27275bd42e6cb0d43ef 283 ProSitePatterns PS00380 Rhodanese signature 1. 43 54 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 BD65_3107 9b8a4dda51a1b27275bd42e6cb0d43ef 283 Pfam PF00581 Rhodanese-like domain 159 272 1.6E-13 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_3107 9b8a4dda51a1b27275bd42e6cb0d43ef 283 Pfam PF00581 Rhodanese-like domain 8 129 6.3E-18 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_3107 9b8a4dda51a1b27275bd42e6cb0d43ef 283 SUPERFAMILY SSF52821 1 151 8.25E-41 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_3107 9b8a4dda51a1b27275bd42e6cb0d43ef 283 SUPERFAMILY SSF52821 160 280 3.27E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_3107 9b8a4dda51a1b27275bd42e6cb0d43ef 283 Gene3D G3DSA:3.40.250.10 1 152 1.1E-46 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_3107 9b8a4dda51a1b27275bd42e6cb0d43ef 283 ProSitePatterns PS00683 Rhodanese C-terminal signature. 260 270 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 BD65_3107 9b8a4dda51a1b27275bd42e6cb0d43ef 283 SMART SM00450 7 133 5.9E-23 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_3107 9b8a4dda51a1b27275bd42e6cb0d43ef 283 SMART SM00450 156 276 2.2E-22 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_1556 bf9fa0d390e0c1cf4c89fd2a0bad6352 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 6.0E-32 T 14-10-2018 IPR010398 Protein of unknown function DUF997 BD65_1556 bf9fa0d390e0c1cf4c89fd2a0bad6352 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 2.5E-32 T 14-10-2018 IPR010398 Protein of unknown function DUF997 BD65_462 482e429ef8e40d36c020276248c85c00 1023 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 3.4E-60 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 BD65_462 482e429ef8e40d36c020276248c85c00 1023 SUPERFAMILY SSF55103 257 543 1.64E-51 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BD65_462 482e429ef8e40d36c020276248c85c00 1023 Pfam PF01565 FAD binding domain 52 192 1.6E-35 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BD65_462 482e429ef8e40d36c020276248c85c00 1023 SUPERFAMILY SSF56176 19 282 9.4E-52 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BD65_462 482e429ef8e40d36c020276248c85c00 1023 Pfam PF13183 4Fe-4S dicluster domain 577 688 3.3E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BD65_462 482e429ef8e40d36c020276248c85c00 1023 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 674 685 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_462 482e429ef8e40d36c020276248c85c00 1023 Gene3D G3DSA:3.30.465.40 30 205 2.2E-43 T 14-10-2018 BD65_462 482e429ef8e40d36c020276248c85c00 1023 Gene3D G3DSA:3.30.465.40 240 301 1.6E-5 T 14-10-2018 BD65_462 482e429ef8e40d36c020276248c85c00 1023 SUPERFAMILY SSF46548 518 692 1.09E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_716 5f5bb909c942a223709aae11262df28c 388 Pfam PF00691 OmpA family 159 253 2.6E-12 T 14-10-2018 IPR006665 OmpA-like domain BD65_716 5f5bb909c942a223709aae11262df28c 388 SUPERFAMILY SSF103088 155 263 3.01E-18 T 14-10-2018 IPR036737 OmpA-like domain superfamily BD65_716 5f5bb909c942a223709aae11262df28c 388 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 66 9.8E-21 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain BD65_716 5f5bb909c942a223709aae11262df28c 388 Gene3D G3DSA:3.30.1330.60 106 292 4.3E-62 T 14-10-2018 IPR036737 OmpA-like domain superfamily BD65_1169 d0b15615f1c0146b39121b5583679325 122 Pfam PF00472 RF-1 domain 2 111 2.7E-19 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BD65_1169 d0b15615f1c0146b39121b5583679325 122 SUPERFAMILY SSF75620 3 97 8.63E-11 T 14-10-2018 BD65_1169 d0b15615f1c0146b39121b5583679325 122 Gene3D G3DSA:3.30.160.20 1 122 6.5E-33 T 14-10-2018 BD65_1169 d0b15615f1c0146b39121b5583679325 122 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 5 21 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BD65_2905 411aebca3c97e02039c65e39745bd4a6 164 Gene3D G3DSA:2.40.100.10 1 164 4.4E-72 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BD65_2905 411aebca3c97e02039c65e39745bd4a6 164 SUPERFAMILY SSF50891 1 162 5.99E-60 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BD65_2905 411aebca3c97e02039c65e39745bd4a6 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 7.1E-49 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BD65_2905 411aebca3c97e02039c65e39745bd4a6 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BD65_2905 411aebca3c97e02039c65e39745bd4a6 164 PIRSF PIRSF001467 1 164 2.3E-30 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 BD65_2905 411aebca3c97e02039c65e39745bd4a6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BD65_2905 411aebca3c97e02039c65e39745bd4a6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BD65_2905 411aebca3c97e02039c65e39745bd4a6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BD65_1849 2766eaad89b1d58d78518a49cdff9b6c 394 Gene3D G3DSA:1.20.1720.10 9 383 6.4E-123 T 14-10-2018 BD65_1849 2766eaad89b1d58d78518a49cdff9b6c 394 Pfam PF07690 Major Facilitator Superfamily 14 349 1.8E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_1849 2766eaad89b1d58d78518a49cdff9b6c 394 SUPERFAMILY SSF103473 7 388 6.93E-59 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_1711 c6e48adfa775a8aad4a60ed6512e2796 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 254 8.5E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BD65_1711 c6e48adfa775a8aad4a60ed6512e2796 255 SUPERFAMILY SSF52540 5 253 2.66E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1711 c6e48adfa775a8aad4a60ed6512e2796 255 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1711 c6e48adfa775a8aad4a60ed6512e2796 255 Gene3D G3DSA:3.40.50.300 5 253 1.2E-60 T 14-10-2018 BD65_1711 c6e48adfa775a8aad4a60ed6512e2796 255 Pfam PF00005 ABC transporter 23 182 1.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1711 c6e48adfa775a8aad4a60ed6512e2796 255 SMART SM00382 31 231 5.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1173 dd4cbcd13b45699d7d52982f99a42b87 104 Gene3D G3DSA:1.10.760.10 21 104 2.8E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BD65_1173 dd4cbcd13b45699d7d52982f99a42b87 104 SUPERFAMILY SSF46626 32 103 6.63E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BD65_1173 dd4cbcd13b45699d7d52982f99a42b87 104 Pfam PF00034 Cytochrome c 27 103 1.4E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_327 8ed1c1914063b6ce0aa5b9261d21a2ff 332 SUPERFAMILY SSF51556 5 326 1.72E-71 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_327 8ed1c1914063b6ce0aa5b9261d21a2ff 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 9.5E-105 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 BD65_327 8ed1c1914063b6ce0aa5b9261d21a2ff 332 Pfam PF00962 Adenosine/AMP deaminase 6 328 1.4E-90 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 BD65_327 8ed1c1914063b6ce0aa5b9261d21a2ff 332 Gene3D G3DSA:3.20.20.140 4 332 4.6E-93 T 14-10-2018 BD65_327 8ed1c1914063b6ce0aa5b9261d21a2ff 332 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 14-10-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 BD65_327 8ed1c1914063b6ce0aa5b9261d21a2ff 332 Hamap MF_00540 Adenosine deaminase [add]. 1 331 51.757 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 BD65_3180 b4d5893da8eb33de4b49f7b87263f9ac 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 119 195 6.8E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal BD65_3180 b4d5893da8eb33de4b49f7b87263f9ac 206 Gene3D G3DSA:3.40.30.10 1 83 7.6E-32 T 14-10-2018 BD65_3180 b4d5893da8eb33de4b49f7b87263f9ac 206 Gene3D G3DSA:1.20.1050.10 86 201 1.0E-40 T 14-10-2018 BD65_3180 b4d5893da8eb33de4b49f7b87263f9ac 206 SUPERFAMILY SSF52833 1 81 3.99E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_3180 b4d5893da8eb33de4b49f7b87263f9ac 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.5E-13 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BD65_3180 b4d5893da8eb33de4b49f7b87263f9ac 206 SUPERFAMILY SSF47616 72 202 1.25E-26 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BD65_2992 a2a1158d945185492a86986a087a191e 554 Gene3D G3DSA:3.60.20.10 2 193 1.9E-74 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_2992 a2a1158d945185492a86986a087a191e 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 1.8E-40 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BD65_2992 a2a1158d945185492a86986a087a191e 554 Pfam PF00733 Asparagine synthase 212 366 2.0E-58 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BD65_2992 a2a1158d945185492a86986a087a191e 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 9.0E-123 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BD65_2992 a2a1158d945185492a86986a087a191e 554 SUPERFAMILY SSF52402 210 483 3.93E-73 T 14-10-2018 BD65_2992 a2a1158d945185492a86986a087a191e 554 PIRSF PIRSF001589 363 507 3.6E-26 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BD65_2992 a2a1158d945185492a86986a087a191e 554 PIRSF PIRSF001589 1 373 3.2E-108 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BD65_2992 a2a1158d945185492a86986a087a191e 554 Gene3D G3DSA:3.40.50.620 194 514 4.1E-114 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2992 a2a1158d945185492a86986a087a191e 554 SUPERFAMILY SSF56235 1 196 2.92E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_1729 b949aff31aa49669ec4df252c403a143 83 Pfam PF01206 Sulfurtransferase TusA 10 79 2.9E-26 T 14-10-2018 IPR001455 TusA-like domain BD65_1729 b949aff31aa49669ec4df252c403a143 83 SUPERFAMILY SSF64307 6 80 1.31E-26 T 14-10-2018 IPR036868 TusA-like domain superfamily BD65_1729 b949aff31aa49669ec4df252c403a143 83 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 14-10-2018 IPR001455 TusA-like domain BD65_1729 b949aff31aa49669ec4df252c403a143 83 Gene3D G3DSA:3.30.110.40 1 80 2.2E-32 T 14-10-2018 IPR036868 TusA-like domain superfamily BD65_1729 b949aff31aa49669ec4df252c403a143 83 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 29.385 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 BD65_2745 4a4bd6701750cb9ae27c5c5c5fa6bdb7 266 SUPERFAMILY SSF53098 101 261 3.16E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2745 4a4bd6701750cb9ae27c5c5c5fa6bdb7 266 Pfam PF00665 Integrase core domain 108 221 3.1E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_2745 4a4bd6701750cb9ae27c5c5c5fa6bdb7 266 Gene3D G3DSA:3.30.420.10 107 241 8.8E-21 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_1437 4a4bd6701750cb9ae27c5c5c5fa6bdb7 266 SUPERFAMILY SSF53098 101 261 3.16E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_1437 4a4bd6701750cb9ae27c5c5c5fa6bdb7 266 Pfam PF00665 Integrase core domain 108 221 3.1E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_1437 4a4bd6701750cb9ae27c5c5c5fa6bdb7 266 Gene3D G3DSA:3.30.420.10 107 241 8.8E-21 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2968 86926d53878b4d3cfbe6fb339cc7d318 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 3.8E-37 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BD65_2968 86926d53878b4d3cfbe6fb339cc7d318 105 SUPERFAMILY SSF81301 4 105 4.09E-37 T 14-10-2018 BD65_2968 86926d53878b4d3cfbe6fb339cc7d318 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 4.6E-28 T 14-10-2018 BD65_2968 86926d53878b4d3cfbe6fb339cc7d318 105 Gene3D G3DSA:3.30.460.10 2 105 6.3E-36 T 14-10-2018 BD65_2968 86926d53878b4d3cfbe6fb339cc7d318 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.574 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BD65_367 a329463b5f4352c2b131cf0b800bf536 463 PIRSF PIRSF006060 1 461 1.2E-46 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_367 a329463b5f4352c2b131cf0b800bf536 463 Pfam PF13520 Amino acid permease 5 416 1.1E-72 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_367 a329463b5f4352c2b131cf0b800bf536 463 Gene3D G3DSA:1.20.1740.10 1 452 1.4E-55 T 14-10-2018 BD65_367 a329463b5f4352c2b131cf0b800bf536 463 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 462 1.7E-169 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 BD65_2717 ffd399c2aa661a867692e7dc989d3554 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 183 3.6E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_2717 ffd399c2aa661a867692e7dc989d3554 188 Gene3D G3DSA:3.40.50.1000 7 185 1.2E-45 T 14-10-2018 IPR023214 HAD superfamily BD65_2717 ffd399c2aa661a867692e7dc989d3554 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 6.3E-57 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase BD65_2717 ffd399c2aa661a867692e7dc989d3554 188 SUPERFAMILY SSF56784 5 185 4.4E-43 T 14-10-2018 IPR036412 HAD-like superfamily BD65_2717 ffd399c2aa661a867692e7dc989d3554 188 Gene3D G3DSA:1.10.150.240 18 89 1.2E-45 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BD65_2717 ffd399c2aa661a867692e7dc989d3554 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 184 4.2E-28 T 14-10-2018 BD65_56 928320ba725bcfd76a6ecbe268feb42e 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.7E-131 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BD65_56 928320ba725bcfd76a6ecbe268feb42e 309 Gene3D G3DSA:3.30.70.250 125 197 6.2E-108 T 14-10-2018 BD65_56 928320ba725bcfd76a6ecbe268feb42e 309 SUPERFAMILY SSF55048 128 197 9.29E-17 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BD65_56 928320ba725bcfd76a6ecbe268feb42e 309 SUPERFAMILY SSF52151 4 307 1.18E-80 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BD65_56 928320ba725bcfd76a6ecbe268feb42e 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 8.7E-40 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BD65_56 928320ba725bcfd76a6ecbe268feb42e 309 Pfam PF00698 Acyl transferase domain 7 291 4.8E-38 T 14-10-2018 IPR014043 Acyl transferase BD65_56 928320ba725bcfd76a6ecbe268feb42e 309 Gene3D G3DSA:3.40.366.10 6 286 6.2E-108 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BD65_56 928320ba725bcfd76a6ecbe268feb42e 309 PIRSF PIRSF000446 1 309 3.4E-140 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BD65_1314 254bbe74c2861a530c1aeb526aab7f58 96 SMART SM01152 7 83 4.2E-35 T 14-10-2018 IPR003746 Protein of unknown function DUF167 BD65_1314 254bbe74c2861a530c1aeb526aab7f58 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 6.8E-25 T 14-10-2018 IPR003746 Protein of unknown function DUF167 BD65_1314 254bbe74c2861a530c1aeb526aab7f58 96 Gene3D G3DSA:3.30.1200.10 1 96 1.4E-34 T 14-10-2018 IPR036591 YggU-like superfamily BD65_1314 254bbe74c2861a530c1aeb526aab7f58 96 SUPERFAMILY SSF69786 9 95 6.15E-31 T 14-10-2018 IPR036591 YggU-like superfamily BD65_1314 254bbe74c2861a530c1aeb526aab7f58 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 19.739 T 14-10-2018 IPR003746 Protein of unknown function DUF167 BD65_1314 254bbe74c2861a530c1aeb526aab7f58 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 90 2.6E-29 T 14-10-2018 IPR005228 Conserved hypothetical protein CHP00251 BD65_2587 9f0570cf9a020bf3ba12007c4012c989 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 176.3 T 14-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BD65_2587 9f0570cf9a020bf3ba12007c4012c989 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 2.2E-147 T 14-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BD65_2587 9f0570cf9a020bf3ba12007c4012c989 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 4.4E-29 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BD65_2587 9f0570cf9a020bf3ba12007c4012c989 264 SUPERFAMILY SSF56276 43 174 7.85E-23 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 BD65_2587 9f0570cf9a020bf3ba12007c4012c989 264 Gene3D G3DSA:3.60.90.10 93 185 1.5E-6 T 14-10-2018 BD65_2587 9f0570cf9a020bf3ba12007c4012c989 264 PIRSF PIRSF001356 1 263 2.1E-155 T 14-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BD65_2161 0e8b9742d911db899897cfbd34643b69 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BD65_2161 0e8b9742d911db899897cfbd34643b69 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 4.2E-99 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BD65_2161 0e8b9742d911db899897cfbd34643b69 224 PIRSF PIRSF001461 1 223 9.4E-108 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BD65_2161 0e8b9742d911db899897cfbd34643b69 224 Gene3D G3DSA:3.20.20.70 4 221 1.2E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2161 0e8b9742d911db899897cfbd34643b69 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.6E-93 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BD65_2161 0e8b9742d911db899897cfbd34643b69 224 SUPERFAMILY SSF51366 3 218 2.51E-76 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BD65_2161 0e8b9742d911db899897cfbd34643b69 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BD65_2253 04d3eefde3181c641600253214e8b72a 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 2.4E-34 T 14-10-2018 IPR007436 Protein of unknown function DUF485 BD65_2969 1f7eac9b4e3904b9a25d5c889c77134b 226 Pfam PF01467 Cytidylyltransferase-like 18 198 1.8E-35 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BD65_2969 1f7eac9b4e3904b9a25d5c889c77134b 226 SUPERFAMILY SSF52374 16 224 4.07E-57 T 14-10-2018 BD65_2969 1f7eac9b4e3904b9a25d5c889c77134b 226 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 79 2.8E-12 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BD65_2969 1f7eac9b4e3904b9a25d5c889c77134b 226 Gene3D G3DSA:3.40.50.620 14 224 1.4E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2969 1f7eac9b4e3904b9a25d5c889c77134b 226 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 14 224 31.916 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BD65_2969 1f7eac9b4e3904b9a25d5c889c77134b 226 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 18 223 2.2E-57 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BD65_3187 a85e2e5f11e49d6e51f2d48345c5b5e4 455 Pfam PF03315 Serine dehydratase beta chain 3 155 5.3E-54 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BD65_3187 a85e2e5f11e49d6e51f2d48345c5b5e4 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 2.5E-219 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BD65_3187 a85e2e5f11e49d6e51f2d48345c5b5e4 455 Gene3D G3DSA:3.30.1330.90 10 159 9.0E-50 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BD65_3187 a85e2e5f11e49d6e51f2d48345c5b5e4 455 SUPERFAMILY SSF143548 16 157 2.2E-44 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BD65_3187 a85e2e5f11e49d6e51f2d48345c5b5e4 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.6E-94 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit BD65_2895 25f42d3fefb7b04fa5514cdf3a797a31 149 Gene3D G3DSA:2.40.50.140 84 149 7.9E-10 T 14-10-2018 BD65_2895 25f42d3fefb7b04fa5514cdf3a797a31 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 145 3.8E-23 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain BD65_2895 25f42d3fefb7b04fa5514cdf3a797a31 149 SUPERFAMILY SSF141322 90 147 7.32E-6 T 14-10-2018 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.836 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 Gene3D G3DSA:3.40.50.720 4 328 8.6E-130 T 14-10-2018 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 SUPERFAMILY SSF51735 1 179 7.61E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.3E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.3E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.3E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.3E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.3E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 3.5E-186 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 SUPERFAMILY SSF55347 155 317 1.82E-55 T 14-10-2018 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 Gene3D G3DSA:3.30.360.10 154 318 8.6E-130 T 14-10-2018 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 2.8E-52 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 SMART SM00846 3 155 1.2E-79 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 PIRSF PIRSF000149 1 337 3.1E-130 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1292 d833f6670aae5d77e94d2ca68cba65c6 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 3.6E-33 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 Gene3D G3DSA:1.10.3370.10 13 429 3.7E-164 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 SUPERFAMILY SSF103491 16 424 7.32E-134 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 Pfam PF00344 SecY translocase 76 417 1.1E-119 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 PIRSF PIRSF004557 11 441 1.4E-123 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 1.0E-140 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.8E-98 T 14-10-2018 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.8E-98 T 14-10-2018 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.8E-98 T 14-10-2018 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.8E-98 T 14-10-2018 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.8E-98 T 14-10-2018 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.8E-98 T 14-10-2018 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.8E-98 T 14-10-2018 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.8E-98 T 14-10-2018 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.8E-98 T 14-10-2018 BD65_2228 8c9156ef90b2c4cc78f794c235621e5f 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.944 T 14-10-2018 IPR026593 Protein translocase subunit SecY BD65_1720 8d683ecf2ca32f4e8fa3ea0b088cef25 317 Pfam PF02687 FtsX-like permease family 218 307 7.5E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BD65_1720 8d683ecf2ca32f4e8fa3ea0b088cef25 317 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 19 316 1.6E-129 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 BD65_1720 8d683ecf2ca32f4e8fa3ea0b088cef25 317 PIRSF PIRSF003097 16 313 7.8E-95 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 BD65_2596 ec2d8e5083d9e3ed667a3027329dcff7 126 Gene3D G3DSA:2.40.40.20 1 126 2.8E-53 T 14-10-2018 BD65_2596 ec2d8e5083d9e3ed667a3027329dcff7 126 PIRSF PIRSF006246 1 125 2.9E-52 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BD65_2596 ec2d8e5083d9e3ed667a3027329dcff7 126 Pfam PF02261 Aspartate decarboxylase 1 114 4.3E-47 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BD65_2596 ec2d8e5083d9e3ed667a3027329dcff7 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 7.7E-60 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BD65_2596 ec2d8e5083d9e3ed667a3027329dcff7 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-63 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BD65_2596 ec2d8e5083d9e3ed667a3027329dcff7 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 69.155 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BD65_2596 ec2d8e5083d9e3ed667a3027329dcff7 126 SUPERFAMILY SSF50692 1 115 3.73E-46 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BD65_1778 e5ac83b6dd9a71dcb66168ed4e067d9e 364 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 350 7.3E-162 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 BD65_1778 e5ac83b6dd9a71dcb66168ed4e067d9e 364 Pfam PF00953 Glycosyl transferase family 4 76 232 9.8E-27 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BD65_1778 e5ac83b6dd9a71dcb66168ed4e067d9e 364 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.843 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 BD65_187 4fe9d35b88ae84e5cee03f9d3c840bba 318 Gene3D G3DSA:3.40.50.1980 207 318 5.6E-42 T 14-10-2018 BD65_187 4fe9d35b88ae84e5cee03f9d3c840bba 318 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 314 2.6E-55 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 BD65_187 4fe9d35b88ae84e5cee03f9d3c840bba 318 SUPERFAMILY SSF53807 29 318 1.57E-77 T 14-10-2018 BD65_187 4fe9d35b88ae84e5cee03f9d3c840bba 318 Gene3D G3DSA:3.40.50.1980 29 206 1.3E-55 T 14-10-2018 BD65_2244 a34222a249d349e87ea227912067de9c 178 SUPERFAMILY SSF57783 99 135 9.35E-5 T 14-10-2018 BD65_2244 a34222a249d349e87ea227912067de9c 178 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 103 140 2.4E-13 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BD65_2244 a34222a249d349e87ea227912067de9c 178 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 47 1.3E-12 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BD65_2244 a34222a249d349e87ea227912067de9c 178 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 59 96 2.5E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BD65_2244 a34222a249d349e87ea227912067de9c 178 SUPERFAMILY SSF57783 12 47 2.55E-10 T 14-10-2018 BD65_2244 a34222a249d349e87ea227912067de9c 178 Gene3D G3DSA:3.30.65.10 4 50 4.9E-7 T 14-10-2018 BD65_2244 a34222a249d349e87ea227912067de9c 178 Gene3D G3DSA:3.30.65.10 51 97 3.2E-9 T 14-10-2018 BD65_2244 a34222a249d349e87ea227912067de9c 178 SUPERFAMILY SSF57783 58 97 3.23E-13 T 14-10-2018 BD65_3120 d334e525224fc7c0819b220adccfd1f6 320 SUPERFAMILY SSF53335 48 306 8.36E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_3120 d334e525224fc7c0819b220adccfd1f6 320 Pfam PF05971 Protein of unknown function (DUF890) 10 307 4.5E-123 T 14-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 BD65_3120 d334e525224fc7c0819b220adccfd1f6 320 PIRSF PIRSF029038 1 320 4.9E-153 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 BD65_3120 d334e525224fc7c0819b220adccfd1f6 320 Gene3D G3DSA:3.40.50.150 45 308 6.8E-79 T 14-10-2018 BD65_3120 d334e525224fc7c0819b220adccfd1f6 320 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 11 310 54.499 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 BD65_2836 91d9d17685820bf543d2e78b5be083ef 627 SUPERFAMILY SSF109998 39 240 9.22E-36 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily BD65_2836 91d9d17685820bf543d2e78b5be083ef 627 Pfam PF13624 SurA N-terminal domain 1 166 2.8E-50 T 14-10-2018 BD65_2836 91d9d17685820bf543d2e78b5be083ef 627 Gene3D G3DSA:3.10.50.40 266 365 7.9E-30 T 14-10-2018 BD65_2836 91d9d17685820bf543d2e78b5be083ef 627 Pfam PF13145 PPIC-type PPIASE domain 377 486 2.3E-6 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 BD65_2836 91d9d17685820bf543d2e78b5be083ef 627 Pfam PF13145 PPIC-type PPIASE domain 249 370 3.6E-24 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 BD65_2836 91d9d17685820bf543d2e78b5be083ef 627 SUPERFAMILY SSF54534 225 357 7.85E-22 T 14-10-2018 BD65_2478 fe9e631a972426b10d78a8a549a091b2 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.798 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BD65_2478 fe9e631a972426b10d78a8a549a091b2 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 4.4E-126 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BD65_2478 fe9e631a972426b10d78a8a549a091b2 241 Pfam PF01048 Phosphorylase superfamily 15 220 6.5E-42 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BD65_2478 fe9e631a972426b10d78a8a549a091b2 241 SUPERFAMILY SSF53167 3 234 1.96E-94 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BD65_2478 fe9e631a972426b10d78a8a549a091b2 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BD65_2478 fe9e631a972426b10d78a8a549a091b2 241 Gene3D G3DSA:3.40.50.1580 1 240 5.4E-78 T 14-10-2018 BD65_2604 1cc8c490044320fab9269e5e1b155a8f 186 Gene3D G3DSA:3.90.1140.10 5 176 3.7E-46 T 14-10-2018 BD65_2604 1cc8c490044320fab9269e5e1b155a8f 186 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 7 176 20.834 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 BD65_2604 1cc8c490044320fab9269e5e1b155a8f 186 Pfam PF02834 LigT like Phosphoesterase 16 91 3.6E-11 T 14-10-2018 IPR014051 Phosphoesterase, HXTX BD65_2604 1cc8c490044320fab9269e5e1b155a8f 186 SUPERFAMILY SSF55144 8 178 3.14E-43 T 14-10-2018 IPR009097 Cyclic phosphodiesterase BD65_2604 1cc8c490044320fab9269e5e1b155a8f 186 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 8 175 5.3E-34 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 BD65_10 55f7807ce6c466f5d448b52207693315 55 Pfam PF04957 Ribosome modulation factor 1 52 3.2E-30 T 14-10-2018 IPR007040 Ribosome modulation factor BD65_10 55f7807ce6c466f5d448b52207693315 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.369 T 14-10-2018 IPR007040 Ribosome modulation factor BD65_10 55f7807ce6c466f5d448b52207693315 55 Gene3D G3DSA:1.10.10.620 1 55 1.7E-29 T 14-10-2018 IPR023200 Ribosome modulation factor domain superfamily BD65_10 55f7807ce6c466f5d448b52207693315 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 9.0E-25 T 14-10-2018 IPR007040 Ribosome modulation factor BD65_2140 09de372ae030a4a18bdb453beae4d7d5 336 SUPERFAMILY SSF48613 98 294 2.47E-11 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BD65_2140 09de372ae030a4a18bdb453beae4d7d5 336 Gene3D G3DSA:1.20.910.10 96 319 4.9E-27 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 Pfam PF00005 ABC transporter 17 178 4.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 SUPERFAMILY SSF52540 2 255 7.03E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 Gene3D G3DSA:3.40.50.300 6 274 2.6E-59 T 14-10-2018 BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 Gene3D G3DSA:3.40.50.300 275 552 6.4E-59 T 14-10-2018 BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 SUPERFAMILY SSF52540 294 517 5.33E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 SMART SM00382 26 223 2.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 SMART SM00382 337 506 5.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 Pfam PF12848 ABC transporter 217 298 1.5E-28 T 14-10-2018 IPR032781 ABC-transporter extension domain BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 Pfam PF00005 ABC transporter 328 459 2.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2190 5af1a6e28e3f95343558d0c3dcc61f0c 633 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2436 a785ab777d369e627cb52f50a5bc3138 426 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 2.9E-198 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BD65_2436 a785ab777d369e627cb52f50a5bc3138 426 Gene3D G3DSA:3.20.20.70 8 414 1.6E-171 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2436 a785ab777d369e627cb52f50a5bc3138 426 Gene3D G3DSA:1.10.400.20 287 410 1.6E-171 T 14-10-2018 BD65_2436 a785ab777d369e627cb52f50a5bc3138 426 PIRSF PIRSF009264 1 426 8.5E-203 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BD65_2436 a785ab777d369e627cb52f50a5bc3138 426 SUPERFAMILY SSF51569 4 425 9.16E-171 T 14-10-2018 BD65_2436 a785ab777d369e627cb52f50a5bc3138 426 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 3.9E-196 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 SUPERFAMILY SSF52374 4 328 3.85E-107 T 14-10-2018 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 3.5E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 3.5E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 3.5E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 3.5E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 4.3E-143 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 45.873 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 Gene3D G3DSA:3.10.290.10 330 424 2.2E-27 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 Pfam PF01479 S4 domain 359 396 1.2E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 Gene3D G3DSA:3.40.50.620 1 227 1.7E-94 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 SUPERFAMILY SSF55174 327 423 4.32E-20 T 14-10-2018 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 SMART SM00363 357 419 3.0E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 Gene3D G3DSA:1.10.240.10 228 329 8.9E-36 T 14-10-2018 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_425 0c9e1b722333001c3b74877c61f48fd2 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 4.4E-91 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_1238 e85c836f5571839c582a76079ed89104 302 SUPERFAMILY SSF53850 88 293 5.43E-45 T 14-10-2018 BD65_1238 e85c836f5571839c582a76079ed89104 302 Pfam PF03466 LysR substrate binding domain 88 291 3.1E-42 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1238 e85c836f5571839c582a76079ed89104 302 Gene3D G3DSA:3.40.190.10 163 262 2.6E-61 T 14-10-2018 BD65_1238 e85c836f5571839c582a76079ed89104 302 SUPERFAMILY SSF46785 6 107 1.44E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1238 e85c836f5571839c582a76079ed89104 302 Gene3D G3DSA:3.40.190.10 91 289 2.6E-61 T 14-10-2018 BD65_1238 e85c836f5571839c582a76079ed89104 302 Gene3D G3DSA:1.10.10.10 3 82 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1238 e85c836f5571839c582a76079ed89104 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 2.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_2657 3c76ab07e00abd835469f8627e8d768d 158 Gene3D G3DSA:1.10.530.10 22 150 3.1E-17 T 14-10-2018 BD65_2657 3c76ab07e00abd835469f8627e8d768d 158 SUPERFAMILY SSF53955 20 139 8.58E-32 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_2657 3c76ab07e00abd835469f8627e8d768d 158 Pfam PF01464 Transglycosylase SLT domain 25 123 3.4E-21 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 BD65_1289 8de4c690848ac855f30620d32f833ef1 291 Gene3D G3DSA:3.30.70.100 182 276 4.7E-25 T 14-10-2018 BD65_1289 8de4c690848ac855f30620d32f833ef1 291 SUPERFAMILY SSF82861 31 115 5.75E-16 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BD65_1289 8de4c690848ac855f30620d32f833ef1 291 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 146 180 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 BD65_1289 8de4c690848ac855f30620d32f833ef1 291 Pfam PF00924 Mechanosensitive ion channel 75 271 1.4E-55 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BD65_1289 8de4c690848ac855f30620d32f833ef1 291 Gene3D G3DSA:2.30.30.60 132 180 1.0E-20 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BD65_1289 8de4c690848ac855f30620d32f833ef1 291 SUPERFAMILY SSF50182 117 182 2.91E-17 T 14-10-2018 IPR010920 LSM domain superfamily BD65_1289 8de4c690848ac855f30620d32f833ef1 291 SUPERFAMILY SSF82689 184 282 1.23E-30 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BD65_1289 8de4c690848ac855f30620d32f833ef1 291 Pfam PF05552 Conserved TM helix 19 67 6.5E-14 T 14-10-2018 IPR008910 Conserved TM helix BD65_2004 74476207936b74fe3b2ffbaf07a52080 442 PIRSF PIRSF005353 3 442 6.4E-179 T 14-10-2018 IPR026033 Purine permease PbuG-like BD65_2004 74476207936b74fe3b2ffbaf07a52080 442 Pfam PF00860 Permease family 29 402 8.1E-45 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BD65_1479 f3df9d2327a61d131785397135e8a713 234 PIRSF PIRSF006232 1 231 1.0E-27 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 BD65_1479 f3df9d2327a61d131785397135e8a713 234 Pfam PF02678 Pirin 5 119 2.7E-19 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 BD65_1479 f3df9d2327a61d131785397135e8a713 234 SUPERFAMILY SSF51182 1 232 6.68E-43 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BD65_1479 f3df9d2327a61d131785397135e8a713 234 Gene3D G3DSA:2.60.120.10 12 133 4.5E-34 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_1479 f3df9d2327a61d131785397135e8a713 234 Gene3D G3DSA:2.60.120.10 134 234 7.7E-34 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 190 2.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 Gene3D G3DSA:3.30.565.10 192 348 6.0E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 SUPERFAMILY SSF47384 121 190 1.06E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 Gene3D G3DSA:3.30.450.20 9 112 1.3E-16 T 14-10-2018 BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 SMART SM00387 233 349 2.3E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 SUPERFAMILY SSF55785 11 99 1.61E-5 T 14-10-2018 IPR035965 PAS domain superfamily BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 SMART SM00091 7 75 1.7E-7 T 14-10-2018 IPR000014 PAS domain BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 SUPERFAMILY SSF55874 198 346 2.23E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 9.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 9.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 9.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 Pfam PF00989 PAS fold 11 97 1.9E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 3.8E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 Gene3D G3DSA:1.10.287.130 116 191 4.8E-14 T 14-10-2018 BD65_1951 4c43a01eea36784ad0993b9b2c68f3e6 349 SMART SM00388 129 194 1.0E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_853 7ff030ab98253014f9f1a3814fed7899 164 SUPERFAMILY SSF116960 1 164 2.22E-68 T 14-10-2018 BD65_853 7ff030ab98253014f9f1a3814fed7899 164 Pfam PF03887 YfbU domain 1 164 4.2E-68 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU BD65_853 7ff030ab98253014f9f1a3814fed7899 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 37.9 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU BD65_853 7ff030ab98253014f9f1a3814fed7899 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 2.0E-91 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU BD65_853 7ff030ab98253014f9f1a3814fed7899 164 Gene3D G3DSA:1.10.287.680 1 53 5.2E-33 T 14-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily BD65_853 7ff030ab98253014f9f1a3814fed7899 164 PIRSF PIRSF006272 1 164 4.1E-74 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU BD65_853 7ff030ab98253014f9f1a3814fed7899 164 Gene3D G3DSA:1.10.3190.10 54 164 2.0E-39 T 14-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily BD65_2460 a1280a434066820396140e021895419e 615 Gene3D G3DSA:3.30.450.20 187 289 1.8E-21 T 14-10-2018 BD65_2460 a1280a434066820396140e021895419e 615 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 325 338 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BD65_2460 a1280a434066820396140e021895419e 615 SUPERFAMILY SSF46689 510 604 7.17E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2460 a1280a434066820396140e021895419e 615 Pfam PF00158 Sigma-54 interaction domain 307 464 1.5E-37 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BD65_2460 a1280a434066820396140e021895419e 615 Gene3D G3DSA:1.10.8.60 470 544 3.5E-17 T 14-10-2018 BD65_2460 a1280a434066820396140e021895419e 615 Gene3D G3DSA:3.30.450.40 1 164 8.5E-44 T 14-10-2018 IPR029016 GAF-like domain superfamily BD65_2460 a1280a434066820396140e021895419e 615 SUPERFAMILY SSF55785 173 276 2.44E-9 T 14-10-2018 IPR035965 PAS domain superfamily BD65_2460 a1280a434066820396140e021895419e 615 Pfam PF00989 PAS fold 178 278 1.1E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 BD65_2460 a1280a434066820396140e021895419e 615 Gene3D G3DSA:1.10.10.60 561 604 2.2E-10 T 14-10-2018 BD65_2460 a1280a434066820396140e021895419e 615 SMART SM00091 177 243 8.9E-4 T 14-10-2018 IPR000014 PAS domain BD65_2460 a1280a434066820396140e021895419e 615 Gene3D G3DSA:3.40.50.300 290 469 4.4E-45 T 14-10-2018 BD65_2460 a1280a434066820396140e021895419e 615 Pfam PF02954 Bacterial regulatory protein, Fis family 564 602 9.9E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BD65_2460 a1280a434066820396140e021895419e 615 SUPERFAMILY SSF52540 307 541 1.54E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_618 aaa1e8872da17f73b438190cd2671733 424 SUPERFAMILY SSF55909 10 422 1.7E-130 T 14-10-2018 BD65_618 aaa1e8872da17f73b438190cd2671733 424 PIRSF PIRSF006356 1 422 4.8E-139 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BD65_618 aaa1e8872da17f73b438190cd2671733 424 TIGRFAM TIGR01078 arcA: arginine deiminase 13 422 3.7E-151 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BD65_618 aaa1e8872da17f73b438190cd2671733 424 Hamap MF_00242 Arginine deiminase [arcA]. 8 422 46.43 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BD65_618 aaa1e8872da17f73b438190cd2671733 424 Gene3D G3DSA:1.10.3930.10 75 161 3.1E-147 T 14-10-2018 BD65_618 aaa1e8872da17f73b438190cd2671733 424 PRINTS PR01466 Bacterial arginine deiminase signature 190 205 1.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BD65_618 aaa1e8872da17f73b438190cd2671733 424 PRINTS PR01466 Bacterial arginine deiminase signature 162 180 1.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BD65_618 aaa1e8872da17f73b438190cd2671733 424 PRINTS PR01466 Bacterial arginine deiminase signature 401 419 1.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BD65_618 aaa1e8872da17f73b438190cd2671733 424 PRINTS PR01466 Bacterial arginine deiminase signature 9 29 1.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BD65_618 aaa1e8872da17f73b438190cd2671733 424 PRINTS PR01466 Bacterial arginine deiminase signature 358 375 1.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BD65_618 aaa1e8872da17f73b438190cd2671733 424 PRINTS PR01466 Bacterial arginine deiminase signature 378 392 1.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BD65_618 aaa1e8872da17f73b438190cd2671733 424 Pfam PF02274 Amidinotransferase 25 419 2.8E-110 T 14-10-2018 BD65_618 aaa1e8872da17f73b438190cd2671733 424 Gene3D G3DSA:3.75.10.10 13 419 3.1E-147 T 14-10-2018 BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 SUPERFAMILY SSF82866 79 302 9.68E-43 T 14-10-2018 BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.8E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.8E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.8E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.8E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 3.2E-89 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 Pfam PF02355 Protein export membrane protein 117 300 1.5E-71 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 Pfam PF07549 SecD/SecF GG Motif 40 66 1.6E-10 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 Gene3D G3DSA:1.20.1640.10 110 313 7.7E-16 T 14-10-2018 BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.498 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BD65_2803 49dcaed134f8e2e033cc54ea855a4259 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 126 288 3.2E-56 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BD65_782 6760fa415c06c8d8aca47d168a5cfd83 235 Pfam PF01569 PAP2 superfamily 97 204 7.5E-11 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BD65_782 6760fa415c06c8d8aca47d168a5cfd83 235 SMART SM00014 92 210 1.7E-14 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BD65_782 6760fa415c06c8d8aca47d168a5cfd83 235 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 41.159 T 14-10-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 BD65_782 6760fa415c06c8d8aca47d168a5cfd83 235 SUPERFAMILY SSF48317 10 213 3.53E-25 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BD65_925 5353b2a9bda90467e3a227442db96099 321 Gene3D G3DSA:3.30.420.40 6 308 2.6E-117 T 14-10-2018 BD65_925 5353b2a9bda90467e3a227442db96099 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 3.7E-136 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BD65_925 5353b2a9bda90467e3a227442db96099 321 SUPERFAMILY SSF53067 4 317 4.43E-63 T 14-10-2018 BD65_925 5353b2a9bda90467e3a227442db96099 321 Pfam PF02685 Glucokinase 6 315 2.7E-123 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BD65_925 5353b2a9bda90467e3a227442db96099 321 Gene3D G3DSA:3.40.367.20 100 299 2.6E-117 T 14-10-2018 BD65_925 5353b2a9bda90467e3a227442db96099 321 Hamap MF_00524 Glucokinase [glk]. 4 316 35.619 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BD65_584 3460eb81a867dd2ee810770b410eb778 453 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BD65_584 3460eb81a867dd2ee810770b410eb778 453 Pfam PF00324 Amino acid permease 18 449 4.0E-115 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BD65_584 3460eb81a867dd2ee810770b410eb778 453 PIRSF PIRSF006060 1 452 2.3E-72 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_584 3460eb81a867dd2ee810770b410eb778 453 Gene3D G3DSA:1.20.1740.10 9 452 9.9E-57 T 14-10-2018 BD65_3175 d51a2d935215001018f315e6000ff05f 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 5.6E-57 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BD65_3175 d51a2d935215001018f315e6000ff05f 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.913 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 BD65_3175 d51a2d935215001018f315e6000ff05f 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 298 2.3E-32 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BD65_3175 d51a2d935215001018f315e6000ff05f 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.3E-23 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BD65_3175 d51a2d935215001018f315e6000ff05f 299 Gene3D G3DSA:3.40.190.10 103 192 1.9E-74 T 14-10-2018 BD65_3175 d51a2d935215001018f315e6000ff05f 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 6.8E-48 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BD65_3175 d51a2d935215001018f315e6000ff05f 299 SUPERFAMILY SSF53850 6 224 6.62E-70 T 14-10-2018 BD65_3175 d51a2d935215001018f315e6000ff05f 299 SUPERFAMILY SSF54913 226 298 3.89E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BD65_3175 d51a2d935215001018f315e6000ff05f 299 Gene3D G3DSA:3.30.70.120 226 299 1.9E-34 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BD65_3175 d51a2d935215001018f315e6000ff05f 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 BD65_3175 d51a2d935215001018f315e6000ff05f 299 Gene3D G3DSA:3.40.190.10 7 221 1.9E-74 T 14-10-2018 BD65_2564 d7c886ce4d7366286d973506f14ddb08 179 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 179 2.0E-58 T 14-10-2018 IPR009502 Secretion monitor GO:0045182 BD65_2564 d7c886ce4d7366286d973506f14ddb08 179 PIRSF PIRSF004572 1 179 2.3E-78 T 14-10-2018 IPR009502 Secretion monitor GO:0045182 BD65_2564 d7c886ce4d7366286d973506f14ddb08 179 Hamap MF_01332 Secretion monitor [secM]. 1 179 41.765 T 14-10-2018 IPR009502 Secretion monitor GO:0045182 BD65_2564 d7c886ce4d7366286d973506f14ddb08 179 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 176 2.0E-56 T 14-10-2018 IPR009502 Secretion monitor GO:0045182 BD65_358 5f2418c85da8e10044c13e7b9bc0f9b0 159 Pfam PF06445 GyrI-like small molecule binding domain 1 150 2.9E-27 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain BD65_358 5f2418c85da8e10044c13e7b9bc0f9b0 159 SUPERFAMILY SSF55136 1 155 6.15E-37 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BD65_358 5f2418c85da8e10044c13e7b9bc0f9b0 159 Gene3D G3DSA:3.20.80.10 1 156 1.8E-41 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BD65_358 5f2418c85da8e10044c13e7b9bc0f9b0 159 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 156 38.707 T 14-10-2018 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 BD65_358 5f2418c85da8e10044c13e7b9bc0f9b0 159 SMART SM00871 1 154 1.9E-35 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding BD65_2183 b5f2e3be8ec8141419c7953071d8a8b6 313 SUPERFAMILY SSF53686 5 302 8.91E-70 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BD65_2183 b5f2e3be8ec8141419c7953071d8a8b6 313 Gene3D G3DSA:3.40.50.1100 6 300 1.6E-78 T 14-10-2018 BD65_2183 b5f2e3be8ec8141419c7953071d8a8b6 313 Gene3D G3DSA:3.40.50.1100 39 141 1.6E-78 T 14-10-2018 BD65_2183 b5f2e3be8ec8141419c7953071d8a8b6 313 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 4 290 2.6E-61 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BD65_1780 d1ec5fc284144667fb4787ac9bb6e9e8 108 Gene3D G3DSA:3.40.30.10 1 108 1.8E-37 T 14-10-2018 BD65_1780 d1ec5fc284144667fb4787ac9bb6e9e8 108 Pfam PF00085 Thioredoxin 5 106 2.8E-34 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 BD65_1780 d1ec5fc284144667fb4787ac9bb6e9e8 108 SUPERFAMILY SSF52833 2 108 7.36E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1780 d1ec5fc284144667fb4787ac9bb6e9e8 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.3E-38 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BD65_1780 d1ec5fc284144667fb4787ac9bb6e9e8 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BD65_1780 d1ec5fc284144667fb4787ac9bb6e9e8 108 PIRSF PIRSF000077 2 108 3.2E-44 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BD65_1780 d1ec5fc284144667fb4787ac9bb6e9e8 108 PRINTS PR00421 Thioredoxin family signature 24 32 8.3E-10 T 14-10-2018 BD65_1780 d1ec5fc284144667fb4787ac9bb6e9e8 108 PRINTS PR00421 Thioredoxin family signature 72 83 8.3E-10 T 14-10-2018 BD65_1780 d1ec5fc284144667fb4787ac9bb6e9e8 108 PRINTS PR00421 Thioredoxin family signature 32 41 8.3E-10 T 14-10-2018 BD65_2003 fae04bf8a024d049b683128c058e4ff7 259 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 116 2.4E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BD65_2003 fae04bf8a024d049b683128c058e4ff7 259 SUPERFAMILY SSF161098 23 209 1.83E-40 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2003 fae04bf8a024d049b683128c058e4ff7 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 223 9.9E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_2003 fae04bf8a024d049b683128c058e4ff7 259 Gene3D G3DSA:1.10.3720.10 17 226 1.5E-45 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2489 e6362630f474f3d21abc22af7c248028 215 SMART SM00855 3 157 5.9E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BD65_2489 e6362630f474f3d21abc22af7c248028 215 SUPERFAMILY SSF53254 1 209 2.63E-55 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BD65_2489 e6362630f474f3d21abc22af7c248028 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 BD65_2489 e6362630f474f3d21abc22af7c248028 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 54.002 T 14-10-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 BD65_2489 e6362630f474f3d21abc22af7c248028 215 Gene3D G3DSA:3.40.50.1240 1 211 3.1E-55 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BD65_2489 e6362630f474f3d21abc22af7c248028 215 PIRSF PIRSF000709 2 172 2.5E-9 T 14-10-2018 BD65_2489 e6362630f474f3d21abc22af7c248028 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 4.2E-56 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BD65_2336 8f4e52f141e8b5ac9ac2b8d0567dd9c2 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site BD65_2336 8f4e52f141e8b5ac9ac2b8d0567dd9c2 323 Gene3D G3DSA:1.10.600.10 1 322 1.1E-124 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily BD65_2336 8f4e52f141e8b5ac9ac2b8d0567dd9c2 323 Pfam PF00348 Polyprenyl synthetase 31 262 4.6E-75 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BD65_2336 8f4e52f141e8b5ac9ac2b8d0567dd9c2 323 SUPERFAMILY SSF48576 5 322 5.92E-99 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily BD65_2336 8f4e52f141e8b5ac9ac2b8d0567dd9c2 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 SUPERFAMILY SSF55973 112 232 5.49E-52 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 Gene3D G3DSA:3.30.300.10 5 233 1.6E-179 T 14-10-2018 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 Gene3D G3DSA:3.30.300.10 11 270 1.6E-179 T 14-10-2018 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 2.7E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 5.1E-200 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 SUPERFAMILY SSF55973 233 382 2.24E-71 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 Gene3D G3DSA:3.30.300.10 103 372 1.6E-179 T 14-10-2018 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 5.2E-45 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 60.11 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 SUPERFAMILY SSF55973 3 109 3.81E-48 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.4E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 PIRSF PIRSF000497 1 382 9.4E-175 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_1297 894c414b9c38e90ac705c0c83e36f8ff 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BD65_905 8203e42de36abc020f0e697c69e52ac8 403 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 112 4.6E-27 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI BD65_905 8203e42de36abc020f0e697c69e52ac8 403 Gene3D G3DSA:1.25.40.10 152 296 1.2E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_905 8203e42de36abc020f0e697c69e52ac8 403 Pfam PF14559 Tetratricopeptide repeat 175 242 5.0E-11 T 14-10-2018 BD65_905 8203e42de36abc020f0e697c69e52ac8 403 SUPERFAMILY SSF48452 161 266 8.47E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_3060 02d195dceb606eb4a5a5bef7f167a0bd 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 1.3E-142 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BD65_3060 02d195dceb606eb4a5a5bef7f167a0bd 338 SUPERFAMILY SSF51735 1 336 4.11E-98 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_3060 02d195dceb606eb4a5a5bef7f167a0bd 338 Gene3D G3DSA:3.40.50.720 3 274 7.1E-141 T 14-10-2018 BD65_3060 02d195dceb606eb4a5a5bef7f167a0bd 338 Gene3D G3DSA:3.90.25.10 194 329 7.1E-141 T 14-10-2018 BD65_3060 02d195dceb606eb4a5a5bef7f167a0bd 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.5E-63 T 14-10-2018 IPR016040 NAD(P)-binding domain BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 Gene3D G3DSA:2.60.40.1180 575 664 5.7E-24 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 SMART SM00642 163 560 4.5E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 3 664 70.655 T 14-10-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 SUPERFAMILY SSF51445 130 567 1.92E-129 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 SUPERFAMILY SSF51011 577 634 1.71E-6 T 14-10-2018 BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 643 1.3E-276 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 Pfam PF00128 Alpha amylase, catalytic domain 185 299 6.9E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 SUPERFAMILY SSF81296 7 144 1.04E-41 T 14-10-2018 IPR014756 Immunoglobulin E-set BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 Gene3D G3DSA:2.60.40.10 1 133 3.5E-44 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 Gene3D G3DSA:3.20.20.80 134 574 4.6E-179 T 14-10-2018 BD65_2118 68631cb4a379f8b05f84aa890e779a7d 666 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 95 4.5E-17 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BD65_1080 62ead825a207e5d63567f42d0995062b 243 Gene3D G3DSA:1.20.1440.120 79 239 7.7E-55 T 14-10-2018 BD65_1080 62ead825a207e5d63567f42d0995062b 243 Pfam PF02565 Recombination protein O C terminal 82 226 2.5E-23 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BD65_1080 62ead825a207e5d63567f42d0995062b 243 Pfam PF11967 Recombination protein O N terminal 4 76 8.7E-24 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal BD65_1080 62ead825a207e5d63567f42d0995062b 243 SUPERFAMILY SSF57863 85 175 3.14E-9 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger BD65_1080 62ead825a207e5d63567f42d0995062b 243 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.242 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BD65_1080 62ead825a207e5d63567f42d0995062b 243 SUPERFAMILY SSF50249 4 75 3.77E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_1080 62ead825a207e5d63567f42d0995062b 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 4.2E-42 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BD65_1080 62ead825a207e5d63567f42d0995062b 243 Gene3D G3DSA:2.40.50.140 1 78 5.2E-34 T 14-10-2018 BD65_1498 a8986ea69599d18ea31105546eb04a22 375 Pfam PF03969 AFG1-like ATPase 5 370 5.8E-145 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 BD65_1498 a8986ea69599d18ea31105546eb04a22 375 Gene3D G3DSA:3.40.50.300 53 199 8.9E-20 T 14-10-2018 BD65_1498 a8986ea69599d18ea31105546eb04a22 375 SUPERFAMILY SSF52540 67 198 2.01E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1498 a8986ea69599d18ea31105546eb04a22 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 53.382 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 BD65_682 75e51e4e04fb96160e8533e856ae53e1 156 Pfam PF03748 Flagellar basal body-associated protein FliL 54 154 3.6E-20 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 BD65_2258 34baac43bcf96e0a135b1d9e270115ca 575 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 574 40.235 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 BD65_2258 34baac43bcf96e0a135b1d9e270115ca 575 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 180 385 6.8E-21 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 BD65_2258 34baac43bcf96e0a135b1d9e270115ca 575 Gene3D G3DSA:3.40.30.10 449 575 8.5E-36 T 14-10-2018 BD65_2258 34baac43bcf96e0a135b1d9e270115ca 575 Pfam PF13899 Thioredoxin-like 472 547 4.5E-13 T 14-10-2018 BD65_2258 34baac43bcf96e0a135b1d9e270115ca 575 SUPERFAMILY SSF74863 32 146 3.14E-41 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BD65_2258 34baac43bcf96e0a135b1d9e270115ca 575 SUPERFAMILY SSF52833 458 571 4.9E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_2258 34baac43bcf96e0a135b1d9e270115ca 575 Pfam PF11412 Disulphide bond corrector protein DsbC 33 143 1.9E-35 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BD65_2258 34baac43bcf96e0a135b1d9e270115ca 575 Gene3D G3DSA:2.60.40.1250 24 160 1.6E-46 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BD65_286 32c7dbb26672496851d316dabc48b7ea 520 SUPERFAMILY SSF56322 10 515 1.57E-164 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BD65_286 32c7dbb26672496851d316dabc48b7ea 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 192 1.1E-16 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_286 32c7dbb26672496851d316dabc48b7ea 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 1.7E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_286 32c7dbb26672496851d316dabc48b7ea 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 1.7E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_286 32c7dbb26672496851d316dabc48b7ea 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 1.7E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_286 32c7dbb26672496851d316dabc48b7ea 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 1.7E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_286 32c7dbb26672496851d316dabc48b7ea 520 PIRSF PIRSF001373 1 520 5.9E-249 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_286 32c7dbb26672496851d316dabc48b7ea 520 Gene3D G3DSA:3.60.120.10 1 520 1.3E-193 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BD65_286 32c7dbb26672496851d316dabc48b7ea 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 514 3.5E-240 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_286 32c7dbb26672496851d316dabc48b7ea 520 Pfam PF00425 chorismate binding enzyme 242 502 1.3E-83 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BD65_2169 2e64036b0844955e2bcd4ef6e20e7c64 394 Pfam PF07690 Major Facilitator Superfamily 15 321 1.4E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2169 2e64036b0844955e2bcd4ef6e20e7c64 394 SUPERFAMILY SSF103473 4 389 1.23E-37 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_2169 2e64036b0844955e2bcd4ef6e20e7c64 394 Gene3D G3DSA:1.20.1250.20 206 388 7.0E-20 T 14-10-2018 BD65_2169 2e64036b0844955e2bcd4ef6e20e7c64 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 390 28.695 T 14-10-2018 IPR023528 Major facilitator superfamily transporter, TsgA BD65_2169 2e64036b0844955e2bcd4ef6e20e7c64 394 Gene3D G3DSA:1.20.1250.20 2 187 1.6E-16 T 14-10-2018 BD65_3020 2f4768f1a1957a8d68dc28016ab0022c 218 SUPERFAMILY SSF50891 89 214 5.31E-42 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BD65_3020 2f4768f1a1957a8d68dc28016ab0022c 218 Gene3D G3DSA:2.40.100.10 87 217 2.0E-53 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BD65_3020 2f4768f1a1957a8d68dc28016ab0022c 218 SUPERFAMILY SSF160467 5 92 2.22E-9 T 14-10-2018 BD65_3020 2f4768f1a1957a8d68dc28016ab0022c 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 4.7E-89 T 14-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BD65_3020 2f4768f1a1957a8d68dc28016ab0022c 218 SMART SM00796 4 202 3.4E-90 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D BD65_3020 2f4768f1a1957a8d68dc28016ab0022c 218 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 202 1.3E-65 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D BD65_1547 e500af414934c1743c7b2048a2731be1 332 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 273 1.4E-116 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BD65_1547 e500af414934c1743c7b2048a2731be1 332 Pfam PF04085 rod shape-determining protein MreC 123 269 1.3E-37 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BD65_1547 e500af414934c1743c7b2048a2731be1 332 Gene3D G3DSA:2.40.10.350 180 257 4.5E-35 T 14-10-2018 BD65_1547 e500af414934c1743c7b2048a2731be1 332 PIRSF PIRSF038471 2 282 3.1E-74 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BD65_1547 e500af414934c1743c7b2048a2731be1 332 Gene3D G3DSA:2.40.10.340 122 266 4.5E-35 T 14-10-2018 BD65_525 b32dfbfa8e2cef8ce9ad9eec34920675 80 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 79 9.0E-28 T 14-10-2018 IPR009950 Protein of unknown function DUF1480 BD65_525 b32dfbfa8e2cef8ce9ad9eec34920675 80 Pfam PF07351 Protein of unknown function (DUF1480) 1 79 5.8E-40 T 14-10-2018 IPR009950 Protein of unknown function DUF1480 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 SUPERFAMILY SSF56719 30 521 2.49E-183 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Gene3D G3DSA:2.120.10.90 535 841 2.1E-132 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Gene3D G3DSA:3.90.199.10 33 521 1.2E-235 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.748 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Gene3D G3DSA:3.30.1360.40 236 333 1.2E-235 T 14-10-2018 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 SMART SM00434 11 499 1.5E-302 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Gene3D G3DSA:1.10.268.10 370 493 1.2E-235 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 2.4E-152 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 743 789 8.0E-15 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 5.8E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.4E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 5.6E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.4E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 737 4.6E-15 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 14-10-2018 BD65_813 7a7aeaa322ac483da15ddc0f40da75a2 889 SUPERFAMILY SSF101904 533 853 2.35E-115 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BD65_1844 3be3927890c90337a5bd69616418f445 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 45.83 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 BD65_1844 3be3927890c90337a5bd69616418f445 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 1.2E-85 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 BD65_1844 3be3927890c90337a5bd69616418f445 161 Gene3D G3DSA:3.50.30.40 1 161 3.9E-61 T 14-10-2018 BD65_1844 3be3927890c90337a5bd69616418f445 161 Pfam PF03737 Aldolase/RraA 6 152 1.2E-35 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BD65_1844 3be3927890c90337a5bd69616418f445 161 SUPERFAMILY SSF89562 2 158 7.85E-44 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily BD65_1844 3be3927890c90337a5bd69616418f445 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.9E-61 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 BD65_351 4d777d0b79a704fe2ce959dc65644fc4 708 SUPERFAMILY SSF55718 552 672 9.03E-29 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BD65_351 4d777d0b79a704fe2ce959dc65644fc4 708 Pfam PF00753 Metallo-beta-lactamase superfamily 140 366 1.3E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_351 4d777d0b79a704fe2ce959dc65644fc4 708 Gene3D G3DSA:3.60.15.30 41 401 2.6E-150 T 14-10-2018 BD65_351 4d777d0b79a704fe2ce959dc65644fc4 708 Gene3D G3DSA:1.25.40.880 402 542 4.7E-44 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily BD65_351 4d777d0b79a704fe2ce959dc65644fc4 708 Pfam PF14864 Alkyl sulfatase C-terminal 550 671 2.9E-32 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal BD65_351 4d777d0b79a704fe2ce959dc65644fc4 708 SUPERFAMILY SSF56281 43 543 1.68E-139 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_351 4d777d0b79a704fe2ce959dc65644fc4 708 Pfam PF14863 Alkyl sulfatase dimerisation 403 541 1.0E-45 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 BD65_351 4d777d0b79a704fe2ce959dc65644fc4 708 SMART SM00849 144 366 8.9E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_351 4d777d0b79a704fe2ce959dc65644fc4 708 Gene3D G3DSA:3.30.1050.10 544 674 2.5E-31 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BD65_383 d460bbb0fd44371d187af4da3432ccd0 65 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 19 65 7.0E-19 T 14-10-2018 BD65_383 d460bbb0fd44371d187af4da3432ccd0 65 Pfam PF13617 YnbE-like lipoprotein 11 63 6.3E-26 T 14-10-2018 IPR025985 YnbE-like lipoprotein BD65_1460 da255a57eedf78304e0239ef543b172a 168 Gene3D G3DSA:3.30.2010.10 55 161 4.4E-7 T 14-10-2018 BD65_1460 da255a57eedf78304e0239ef543b172a 168 Pfam PF01863 Protein of unknown function DUF45 9 149 2.9E-11 T 14-10-2018 IPR002725 Protein of unknown function DUF45 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 PIRSF PIRSF000349 1 208 5.1E-79 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 SUPERFAMILY SSF46609 1 89 1.83E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.7E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 3.7E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.7E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 3.7E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 3.7E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 Gene3D G3DSA:1.10.287.990 20 90 1.4E-30 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 SUPERFAMILY SSF54719 95 206 4.58E-45 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 202 5.7E-41 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 2.9E-31 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_2048 0144060b6e2883c7f16f50a5d34fc026 208 Gene3D G3DSA:2.40.500.20 94 208 2.3E-49 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_1730 7f97350cb373e2b8d62b0a90bd0ecad4 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 2.0E-33 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BD65_1730 7f97350cb373e2b8d62b0a90bd0ecad4 222 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 3.4E-60 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BD65_1730 7f97350cb373e2b8d62b0a90bd0ecad4 222 Hamap MF_02088 Probable queuosine precursor transporter. 7 213 15.312 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BD65_847 f1145a24499c55ab1dcad3dc82b19249 150 Gene3D G3DSA:1.20.58.1610 1 124 1.5E-42 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_847 f1145a24499c55ab1dcad3dc82b19249 150 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 1.5E-31 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_847 f1145a24499c55ab1dcad3dc82b19249 150 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.881 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 BD65_2046 43a7f9bfcd7ae0be2f9918d6314cb497 226 Pfam PF03475 3-alpha domain 168 211 1.2E-13 T 14-10-2018 IPR005163 3-alpha domain BD65_2046 43a7f9bfcd7ae0be2f9918d6314cb497 226 SUPERFAMILY SSF50800 5 222 1.88E-73 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BD65_2046 43a7f9bfcd7ae0be2f9918d6314cb497 226 Pfam PF03473 MOSC domain 46 155 5.7E-22 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 BD65_2046 43a7f9bfcd7ae0be2f9918d6314cb497 226 Gene3D G3DSA:2.40.33.20 1 226 2.0E-80 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 PIRSF PIRSF002111 1 534 3.3E-217 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Gene3D G3DSA:2.40.50.140 6 97 6.7E-18 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Pfam PF00575 S1 RNA binding domain 20 86 4.6E-7 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Pfam PF00575 S1 RNA binding domain 103 171 7.9E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Pfam PF00575 S1 RNA binding domain 449 520 4.3E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Pfam PF00575 S1 RNA binding domain 361 434 3.3E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.0E-235 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SUPERFAMILY SSF50249 1 112 1.09E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SMART SM00316 275 347 2.2E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SMART SM00316 19 87 6.6E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SMART SM00316 362 434 1.8E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SMART SM00316 103 171 3.7E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SMART SM00316 449 520 2.0E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SMART SM00316 190 260 2.8E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Gene3D G3DSA:2.40.50.140 187 268 1.1E-27 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SUPERFAMILY SSF50249 103 185 1.09E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SUPERFAMILY SSF50249 363 444 4.85E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Gene3D G3DSA:2.40.50.140 269 357 4.3E-31 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Gene3D G3DSA:2.40.50.140 98 181 2.2E-6 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Gene3D G3DSA:2.40.50.140 358 443 1.7E-22 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SUPERFAMILY SSF50249 255 371 8.24E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.8E-99 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.8E-99 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.8E-99 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.8E-99 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.8E-99 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.8E-99 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.8E-99 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.8E-99 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.8E-99 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 Gene3D G3DSA:2.40.50.140 444 528 1.2E-20 T 14-10-2018 BD65_3244 81c3f1a24382356505cca4e91b7317e7 557 SUPERFAMILY SSF50249 429 534 3.66E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_850 bc9423b7ffd66a177496a00d62e2d1fa 199 Pfam PF13023 HD domain 11 161 3.5E-18 T 14-10-2018 IPR006674 HD domain BD65_850 bc9423b7ffd66a177496a00d62e2d1fa 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 45.601 T 14-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 BD65_850 bc9423b7ffd66a177496a00d62e2d1fa 199 SUPERFAMILY SSF109604 3 185 9.71E-45 T 14-10-2018 BD65_850 bc9423b7ffd66a177496a00d62e2d1fa 199 SMART SM00471 26 151 7.1E-7 T 14-10-2018 IPR003607 HD/PDEase domain BD65_850 bc9423b7ffd66a177496a00d62e2d1fa 199 Gene3D G3DSA:1.10.3210.10 1 198 4.8E-87 T 14-10-2018 BD65_850 bc9423b7ffd66a177496a00d62e2d1fa 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 4.0E-48 T 14-10-2018 BD65_1710 26227a2686649094953924156e73b603 233 SMART SM00382 26 212 7.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1710 26227a2686649094953924156e73b603 233 SUPERFAMILY SSF52540 2 230 1.02E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1710 26227a2686649094953924156e73b603 233 Gene3D G3DSA:3.40.50.300 1 233 3.2E-63 T 14-10-2018 BD65_1710 26227a2686649094953924156e73b603 233 PIRSF PIRSF039137 1 233 5.8E-101 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 BD65_1710 26227a2686649094953924156e73b603 233 Pfam PF00005 ABC transporter 17 161 1.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1710 26227a2686649094953924156e73b603 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_320 b101ae4d9f35a32bd0f60641e3de2f79 207 Gene3D G3DSA:3.20.20.20 37 97 3.7E-11 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BD65_320 b101ae4d9f35a32bd0f60641e3de2f79 207 Gene3D G3DSA:3.30.70.20 98 183 1.3E-19 T 14-10-2018 BD65_320 b101ae4d9f35a32bd0f60641e3de2f79 207 PIRSF PIRSF005784 3 191 1.9E-84 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 BD65_320 b101ae4d9f35a32bd0f60641e3de2f79 207 Pfam PF04060 Putative Fe-S cluster 44 76 3.6E-13 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 BD65_320 b101ae4d9f35a32bd0f60641e3de2f79 207 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 169 25.44 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 BD65_320 b101ae4d9f35a32bd0f60641e3de2f79 207 Pfam PF14697 4Fe-4S dicluster domain 110 164 4.0E-17 T 14-10-2018 BD65_320 b101ae4d9f35a32bd0f60641e3de2f79 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_320 b101ae4d9f35a32bd0f60641e3de2f79 207 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 189 2.0E-85 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 BD65_320 b101ae4d9f35a32bd0f60641e3de2f79 207 SUPERFAMILY SSF54862 37 176 6.98E-31 T 14-10-2018 BD65_2432 576b5a65aa1866b8b332da8d6f0ce895 728 SUPERFAMILY SSF103515 419 728 2.22E-38 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily BD65_2432 576b5a65aa1866b8b332da8d6f0ce895 728 Gene3D G3DSA:2.40.128.130 420 726 1.5E-48 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily BD65_2432 576b5a65aa1866b8b332da8d6f0ce895 728 Pfam PF03797 Autotransporter beta-domain 450 708 2.4E-43 T 14-10-2018 IPR005546 Autotransporter beta-domain BD65_2432 576b5a65aa1866b8b332da8d6f0ce895 728 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 370 713 1.1E-9 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 BD65_2432 576b5a65aa1866b8b332da8d6f0ce895 728 SMART SM00869 447 718 4.8E-36 T 14-10-2018 IPR005546 Autotransporter beta-domain BD65_1369 9d15618eecd5bd7641c697f150cf4b66 398 PIRSF PIRSF001434 1 395 3.0E-114 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_1369 9d15618eecd5bd7641c697f150cf4b66 398 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 1.7E-113 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_1369 9d15618eecd5bd7641c697f150cf4b66 398 SUPERFAMILY SSF53383 23 394 1.46E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_1369 9d15618eecd5bd7641c697f150cf4b66 398 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BD65_1369 9d15618eecd5bd7641c697f150cf4b66 398 Gene3D G3DSA:3.40.640.10 1 258 3.8E-69 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_1369 9d15618eecd5bd7641c697f150cf4b66 398 Gene3D G3DSA:3.90.1150.10 259 395 7.0E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1369 9d15618eecd5bd7641c697f150cf4b66 398 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 6.7E-168 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 BD65_2751 5bd17c8bc236c7cee4f299a3ed7c2c7d 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 37.702 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 BD65_2751 5bd17c8bc236c7cee4f299a3ed7c2c7d 154 Pfam PF00075 RNase H 3 141 8.4E-53 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BD65_2751 5bd17c8bc236c7cee4f299a3ed7c2c7d 154 Gene3D G3DSA:3.30.420.10 1 154 2.1E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2751 5bd17c8bc236c7cee4f299a3ed7c2c7d 154 SUPERFAMILY SSF53098 3 143 1.9E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_1983 ecef325198ad398a5d3aeaa9f01a7b59 274 Pfam PF00119 ATP synthase A chain 50 268 2.6E-54 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1983 ecef325198ad398a5d3aeaa9f01a7b59 274 Gene3D G3DSA:1.20.120.220 98 274 6.5E-70 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1983 ecef325198ad398a5d3aeaa9f01a7b59 274 SUPERFAMILY SSF81336 98 268 1.12E-48 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1983 ecef325198ad398a5d3aeaa9f01a7b59 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 269 1.3E-43 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1983 ecef325198ad398a5d3aeaa9f01a7b59 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 274 15.95 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1983 ecef325198ad398a5d3aeaa9f01a7b59 274 PRINTS PR00123 ATP synthase A subunit signature 254 269 7.9E-15 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1983 ecef325198ad398a5d3aeaa9f01a7b59 274 PRINTS PR00123 ATP synthase A subunit signature 206 228 7.9E-15 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1983 ecef325198ad398a5d3aeaa9f01a7b59 274 PRINTS PR00123 ATP synthase A subunit signature 107 123 7.9E-15 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1983 ecef325198ad398a5d3aeaa9f01a7b59 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1789 bd37ac15c4bf301bc4f1bfb9a6657e86 616 Pfam PF00920 Dehydratase family 34 607 4.3E-217 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BD65_1789 bd37ac15c4bf301bc4f1bfb9a6657e86 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.117 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BD65_1789 bd37ac15c4bf301bc4f1bfb9a6657e86 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BD65_1789 bd37ac15c4bf301bc4f1bfb9a6657e86 616 SUPERFAMILY SSF143975 3 420 4.05E-132 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BD65_1789 bd37ac15c4bf301bc4f1bfb9a6657e86 616 SUPERFAMILY SSF52016 421 610 1.41E-59 T 14-10-2018 BD65_1789 bd37ac15c4bf301bc4f1bfb9a6657e86 616 Gene3D G3DSA:3.50.30.80 421 573 1.7E-55 T 14-10-2018 BD65_1789 bd37ac15c4bf301bc4f1bfb9a6657e86 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 2.1E-262 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BD65_1789 bd37ac15c4bf301bc4f1bfb9a6657e86 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BD65_313 a6903b6ec00d5523489672935f28d677 211 SMART SM00900 100 192 1.1E-28 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BD65_313 a6903b6ec00d5523489672935f28d677 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 6.3E-67 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BD65_313 a6903b6ec00d5523489672935f28d677 211 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.132 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BD65_313 a6903b6ec00d5523489672935f28d677 211 PIRSF PIRSF006091 1 205 3.7E-72 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BD65_313 a6903b6ec00d5523489672935f28d677 211 Pfam PF04205 FMN-binding domain 100 187 4.4E-16 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BD65_1330 14c3202adc366c0c573feed6e28d09c6 310 Gene3D G3DSA:3.40.1190.20 1 309 6.9E-108 T 14-10-2018 IPR029056 Ribokinase-like BD65_1330 14c3202adc366c0c573feed6e28d09c6 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BD65_1330 14c3202adc366c0c573feed6e28d09c6 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 6.8E-89 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BD65_1330 14c3202adc366c0c573feed6e28d09c6 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BD65_1330 14c3202adc366c0c573feed6e28d09c6 310 SUPERFAMILY SSF53613 4 296 1.56E-62 T 14-10-2018 IPR029056 Ribokinase-like BD65_1330 14c3202adc366c0c573feed6e28d09c6 310 PIRSF PIRSF000535 1 309 8.8E-96 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BD65_1330 14c3202adc366c0c573feed6e28d09c6 310 Pfam PF00294 pfkB family carbohydrate kinase 19 295 9.6E-58 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BD65_1814 4370b64a9b44a6021c9e790a940788f9 159 SUPERFAMILY SSF55424 25 143 1.89E-26 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BD65_1814 4370b64a9b44a6021c9e790a940788f9 159 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 26 135 1.7E-18 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BD65_1814 4370b64a9b44a6021c9e790a940788f9 159 Gene3D G3DSA:3.30.390.30 23 146 9.4E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BD65_1814 4370b64a9b44a6021c9e790a940788f9 159 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 110 130 3.6E-5 T 14-10-2018 BD65_1814 4370b64a9b44a6021c9e790a940788f9 159 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 20 41 3.6E-5 T 14-10-2018 BD65_1814 4370b64a9b44a6021c9e790a940788f9 159 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 88 103 3.6E-5 T 14-10-2018 BD65_1218 4570e8751db2071214da93cc3bfce1ca 441 Pfam PF00583 Acetyltransferase (GNAT) family 335 412 2.6E-7 T 14-10-2018 IPR000182 GNAT domain BD65_1218 4570e8751db2071214da93cc3bfce1ca 441 SUPERFAMILY SSF53633 4 290 4.89E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1218 4570e8751db2071214da93cc3bfce1ca 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 239.321 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 BD65_1218 4570e8751db2071214da93cc3bfce1ca 441 SUPERFAMILY SSF55729 227 417 2.96E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_1218 4570e8751db2071214da93cc3bfce1ca 441 Gene3D G3DSA:3.40.1160.10 7 292 5.4E-86 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1218 4570e8751db2071214da93cc3bfce1ca 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 1.4E-200 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 BD65_1218 4570e8751db2071214da93cc3bfce1ca 441 Pfam PF00696 Amino acid kinase family 25 266 6.8E-31 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BD65_1218 4570e8751db2071214da93cc3bfce1ca 441 PIRSF PIRSF000423 1 441 3.2E-211 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 BD65_1218 4570e8751db2071214da93cc3bfce1ca 441 Gene3D G3DSA:3.40.630.30 293 441 1.1E-38 T 14-10-2018 BD65_2689 eb30f94ca0c8d8f6a9631ec5ed830887 264 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 211 226 5.8E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BD65_2689 eb30f94ca0c8d8f6a9631ec5ed830887 264 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 131 148 5.8E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BD65_2689 eb30f94ca0c8d8f6a9631ec5ed830887 264 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 210 5.8E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BD65_2689 eb30f94ca0c8d8f6a9631ec5ed830887 264 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 188 198 5.8E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BD65_2689 eb30f94ca0c8d8f6a9631ec5ed830887 264 Pfam PF01478 Type IV leader peptidase family 122 230 5.3E-24 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BD65_2689 eb30f94ca0c8d8f6a9631ec5ed830887 264 Gene3D G3DSA:1.20.120.1220 111 237 2.5E-6 T 14-10-2018 BD65_2689 eb30f94ca0c8d8f6a9631ec5ed830887 264 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 110 1.7E-34 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal BD65_3073 3e220ee92edd22bee3decd6e9cc8e364 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 29.783 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BD65_3073 3e220ee92edd22bee3decd6e9cc8e364 225 Gene3D G3DSA:3.40.50.300 2 224 2.7E-71 T 14-10-2018 BD65_3073 3e220ee92edd22bee3decd6e9cc8e364 225 Pfam PF13500 AAA domain 5 211 7.1E-38 T 14-10-2018 BD65_3073 3e220ee92edd22bee3decd6e9cc8e364 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 1.1E-62 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BD65_3073 3e220ee92edd22bee3decd6e9cc8e364 225 SUPERFAMILY SSF52540 3 211 8.18E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3073 3e220ee92edd22bee3decd6e9cc8e364 225 PIRSF PIRSF006755 1 224 3.1E-82 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BD65_909 afc36abb4decb1d0873430ce26b1d3ad 164 SUPERFAMILY SSF82093 30 143 3.53E-40 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 BD65_909 afc36abb4decb1d0873430ce26b1d3ad 164 Gene3D G3DSA:2.40.50.140 30 143 3.0E-43 T 14-10-2018 BD65_909 afc36abb4decb1d0873430ce26b1d3ad 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 32.319 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 BD65_909 afc36abb4decb1d0873430ce26b1d3ad 164 Pfam PF03100 CcmE 4 137 1.0E-44 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 BD65_941 009921f385648bee72a8cfbb317d0095 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 1.4E-30 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor BD65_941 009921f385648bee72a8cfbb317d0095 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 1.0E-20 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor BD65_2761 194e97c571cf163beac26edea4059255 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 206 9.3E-106 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 BD65_2761 194e97c571cf163beac26edea4059255 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 7.1E-63 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BD65_2761 194e97c571cf163beac26edea4059255 209 PIRSF PIRSF006102 3 209 3.9E-71 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BD65_2761 194e97c571cf163beac26edea4059255 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.933 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 BD65_398 b25b020634246dbdc642adbdc9019eee 535 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BD65_398 b25b020634246dbdc642adbdc9019eee 535 SMART SM00091 80 146 1.6E-7 T 14-10-2018 IPR000014 PAS domain BD65_398 b25b020634246dbdc642adbdc9019eee 535 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BD65_398 b25b020634246dbdc642adbdc9019eee 535 Gene3D G3DSA:3.30.70.260 1 81 4.4E-27 T 14-10-2018 BD65_398 b25b020634246dbdc642adbdc9019eee 535 SUPERFAMILY SSF52540 206 447 3.42E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_398 b25b020634246dbdc642adbdc9019eee 535 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BD65_398 b25b020634246dbdc642adbdc9019eee 535 Gene3D G3DSA:3.30.450.20 82 190 9.3E-27 T 14-10-2018 BD65_398 b25b020634246dbdc642adbdc9019eee 535 SUPERFAMILY SSF55785 77 151 3.24E-8 T 14-10-2018 IPR035965 PAS domain superfamily BD65_398 b25b020634246dbdc642adbdc9019eee 535 Pfam PF00989 PAS fold 82 128 6.4E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 BD65_398 b25b020634246dbdc642adbdc9019eee 535 Pfam PF00158 Sigma-54 interaction domain 207 372 2.3E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BD65_398 b25b020634246dbdc642adbdc9019eee 535 SMART SM00382 226 370 5.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_398 b25b020634246dbdc642adbdc9019eee 535 SUPERFAMILY SSF46689 459 513 1.37E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_398 b25b020634246dbdc642adbdc9019eee 535 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 466 513 9.1E-28 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 BD65_398 b25b020634246dbdc642adbdc9019eee 535 Gene3D G3DSA:3.40.50.300 193 377 1.3E-59 T 14-10-2018 BD65_398 b25b020634246dbdc642adbdc9019eee 535 SUPERFAMILY SSF55021 2 69 1.01E-5 T 14-10-2018 BD65_398 b25b020634246dbdc642adbdc9019eee 535 Gene3D G3DSA:1.10.8.60 378 455 1.2E-19 T 14-10-2018 BD65_398 b25b020634246dbdc642adbdc9019eee 535 Gene3D G3DSA:1.10.10.60 456 513 1.2E-26 T 14-10-2018 BD65_2109 6b2bf5df1bb0bdebd2c020a295360e11 166 Pfam PF00583 Acetyltransferase (GNAT) family 48 137 3.3E-18 T 14-10-2018 IPR000182 GNAT domain BD65_2109 6b2bf5df1bb0bdebd2c020a295360e11 166 Gene3D G3DSA:3.40.630.30 1 164 2.7E-40 T 14-10-2018 BD65_2109 6b2bf5df1bb0bdebd2c020a295360e11 166 SUPERFAMILY SSF55729 3 161 1.12E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 SUPERFAMILY SSF102735 1 131 1.1E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 SUPERFAMILY SSF109998 248 429 1.83E-48 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 2.0E-145 T 14-10-2018 IPR005215 Trigger factor GO:0015031 BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 Gene3D G3DSA:1.10.3120.10 116 417 4.1E-113 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 PIRSF PIRSF003095 1 434 6.3E-131 T 14-10-2018 IPR005215 Trigger factor GO:0015031 BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 Gene3D G3DSA:3.10.50.40 150 246 4.1E-113 T 14-10-2018 BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.2E-40 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 SUPERFAMILY SSF54534 91 241 5.3E-38 T 14-10-2018 BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 232 2.1E-14 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 Gene3D G3DSA:3.30.70.1050 1 115 1.3E-43 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 7.7E-45 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BD65_2831 a899ed52283eb90a3ee3d1307208e1d2 434 Hamap MF_00303 Trigger factor [tig]. 1 418 22.203 T 14-10-2018 IPR005215 Trigger factor GO:0015031 BD65_2389 10c575a522dc34d3a3afbcc6cdfc0a6f 167 SUPERFAMILY SSF55729 9 166 1.89E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2389 10c575a522dc34d3a3afbcc6cdfc0a6f 167 Pfam PF00583 Acetyltransferase (GNAT) family 44 144 3.9E-15 T 14-10-2018 IPR000182 GNAT domain BD65_2389 10c575a522dc34d3a3afbcc6cdfc0a6f 167 Gene3D G3DSA:3.40.630.30 14 151 1.1E-25 T 14-10-2018 BD65_2497 48a445377c6b65eab2a6fdf65b382235 195 SUPERFAMILY SSF53218 4 189 1.83E-46 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BD65_2497 48a445377c6b65eab2a6fdf65b382235 195 Gene3D G3DSA:3.40.980.10 1 195 3.1E-63 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BD65_2497 48a445377c6b65eab2a6fdf65b382235 195 SMART SM00852 7 153 1.4E-21 T 14-10-2018 IPR001453 MoaB/Mog domain BD65_2497 48a445377c6b65eab2a6fdf65b382235 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 144 5.7E-39 T 14-10-2018 IPR001453 MoaB/Mog domain BD65_2497 48a445377c6b65eab2a6fdf65b382235 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 BD65_2497 48a445377c6b65eab2a6fdf65b382235 195 Pfam PF00994 Probable molybdopterin binding domain 8 145 2.0E-27 T 14-10-2018 IPR001453 MoaB/Mog domain BD65_2172 58c61880ce4ac5b322fecd054c332f47 339 SMART SM00354 1 71 6.6E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_2172 58c61880ce4ac5b322fecd054c332f47 339 SUPERFAMILY SSF47413 1 59 3.75E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_2172 58c61880ce4ac5b322fecd054c332f47 339 Pfam PF13377 Periplasmic binding protein-like domain 169 321 1.8E-29 T 14-10-2018 BD65_2172 58c61880ce4ac5b322fecd054c332f47 339 SUPERFAMILY SSF53822 61 325 1.35E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_2172 58c61880ce4ac5b322fecd054c332f47 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 BD65_2172 58c61880ce4ac5b322fecd054c332f47 339 Gene3D G3DSA:3.40.50.2300 61 302 3.7E-62 T 14-10-2018 BD65_2172 58c61880ce4ac5b322fecd054c332f47 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_2172 58c61880ce4ac5b322fecd054c332f47 339 Gene3D G3DSA:3.40.50.2300 160 287 3.7E-62 T 14-10-2018 BD65_2172 58c61880ce4ac5b322fecd054c332f47 339 Gene3D G3DSA:1.10.260.40 1 57 8.2E-22 T 14-10-2018 BD65_1180 a3cc4db5122f66ebb18e80357103378e 1160 Pfam PF02811 PHP domain 8 171 6.2E-43 T 14-10-2018 IPR004013 PHP domain GO:0003824 BD65_1180 a3cc4db5122f66ebb18e80357103378e 1160 Gene3D G3DSA:2.40.50.140 985 1074 2.6E-5 T 14-10-2018 BD65_1180 a3cc4db5122f66ebb18e80357103378e 1160 SMART SM00481 7 74 4.3E-27 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BD65_1180 a3cc4db5122f66ebb18e80357103378e 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1180 a3cc4db5122f66ebb18e80357103378e 1160 Gene3D G3DSA:3.20.20.140 1 270 2.9E-91 T 14-10-2018 BD65_1180 a3cc4db5122f66ebb18e80357103378e 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 4.4E-24 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1180 a3cc4db5122f66ebb18e80357103378e 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 734 3.5E-177 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_1180 a3cc4db5122f66ebb18e80357103378e 1160 Gene3D G3DSA:1.10.10.1600 433 510 1.0E-34 T 14-10-2018 BD65_1180 a3cc4db5122f66ebb18e80357103378e 1160 SUPERFAMILY SSF89550 6 263 7.26E-16 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BD65_1180 a3cc4db5122f66ebb18e80357103378e 1160 Pfam PF01336 OB-fold nucleic acid binding domain 998 1071 4.8E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BD65_754 509673f8582f6569a92b4fca4b5eab07 352 Pfam PF04632 Fusaric acid resistance protein family 20 248 3.2E-17 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 BD65_1056 e7b293d9033cf2d60cb8eaca28ae8259 417 PIRSF PIRSF000412 1 417 9.9E-169 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BD65_1056 e7b293d9033cf2d60cb8eaca28ae8259 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.231 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BD65_1056 e7b293d9033cf2d60cb8eaca28ae8259 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BD65_1056 e7b293d9033cf2d60cb8eaca28ae8259 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 2.6E-184 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BD65_1056 e7b293d9033cf2d60cb8eaca28ae8259 417 SUPERFAMILY SSF53383 6 416 1.38E-179 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_1056 e7b293d9033cf2d60cb8eaca28ae8259 417 Gene3D G3DSA:3.90.1150.10 10 395 2.9E-182 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1056 e7b293d9033cf2d60cb8eaca28ae8259 417 Gene3D G3DSA:3.40.640.10 37 289 2.9E-182 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_596 2e990954206e0b597b41b70b403a01a8 463 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 457 8.8E-47 T 14-10-2018 IPR000160 GGDEF domain BD65_596 2e990954206e0b597b41b70b403a01a8 463 SUPERFAMILY SSF55785 148 283 3.87E-16 T 14-10-2018 IPR035965 PAS domain superfamily BD65_596 2e990954206e0b597b41b70b403a01a8 463 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 46 154 4.4E-17 T 14-10-2018 IPR000014 PAS domain BD65_596 2e990954206e0b597b41b70b403a01a8 463 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 163 289 1.1E-5 T 14-10-2018 IPR000014 PAS domain BD65_596 2e990954206e0b597b41b70b403a01a8 463 Gene3D G3DSA:3.30.450.20 167 282 1.4E-16 T 14-10-2018 BD65_596 2e990954206e0b597b41b70b403a01a8 463 Pfam PF13426 PAS domain 49 150 1.2E-11 T 14-10-2018 IPR000014 PAS domain BD65_596 2e990954206e0b597b41b70b403a01a8 463 SMART SM00086 109 151 1.2E-6 T 14-10-2018 IPR001610 PAC motif BD65_596 2e990954206e0b597b41b70b403a01a8 463 SMART SM00086 244 285 7.0 T 14-10-2018 IPR001610 PAC motif BD65_596 2e990954206e0b597b41b70b403a01a8 463 SUPERFAMILY SSF55785 50 158 4.83E-17 T 14-10-2018 IPR035965 PAS domain superfamily BD65_596 2e990954206e0b597b41b70b403a01a8 463 Pfam PF08447 PAS fold 191 272 2.3E-10 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BD65_596 2e990954206e0b597b41b70b403a01a8 463 SMART SM00091 37 103 0.0014 T 14-10-2018 IPR000014 PAS domain BD65_596 2e990954206e0b597b41b70b403a01a8 463 SMART SM00091 163 238 8.9E-4 T 14-10-2018 IPR000014 PAS domain BD65_596 2e990954206e0b597b41b70b403a01a8 463 SMART SM00267 285 461 2.5E-58 T 14-10-2018 IPR000160 GGDEF domain BD65_596 2e990954206e0b597b41b70b403a01a8 463 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 459 9.6E-49 T 14-10-2018 IPR000160 GGDEF domain BD65_596 2e990954206e0b597b41b70b403a01a8 463 Gene3D G3DSA:3.30.450.20 37 166 1.6E-23 T 14-10-2018 BD65_596 2e990954206e0b597b41b70b403a01a8 463 SUPERFAMILY SSF55073 301 459 3.61E-43 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_596 2e990954206e0b597b41b70b403a01a8 463 Gene3D G3DSA:3.30.70.270 283 461 1.9E-53 T 14-10-2018 BD65_882 b00f695993854551837f00e3989372c7 342 SUPERFAMILY SSF103481 241 326 8.11E-17 T 14-10-2018 BD65_882 b00f695993854551837f00e3989372c7 342 Pfam PF00892 EamA-like transporter family 170 322 2.2E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_882 b00f695993854551837f00e3989372c7 342 Pfam PF00892 EamA-like transporter family 23 157 6.7E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_882 b00f695993854551837f00e3989372c7 342 SUPERFAMILY SSF103481 58 160 5.62E-9 T 14-10-2018 BD65_882 b00f695993854551837f00e3989372c7 342 Gene3D G3DSA:1.10.3730.20 231 327 2.4E-6 T 14-10-2018 BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 SUPERFAMILY SSF82679 6 116 2.49E-39 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 Pfam PF02357 Transcription termination factor nusG 7 112 7.0E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 Gene3D G3DSA:3.30.70.940 1 121 3.9E-47 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 SUPERFAMILY SSF50104 125 180 1.15E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 Pfam PF00467 KOW motif 130 162 9.5E-8 T 14-10-2018 IPR005824 KOW BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 SMART SM00738 6 115 9.1E-49 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.564 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 SMART SM00739 127 154 2.0E-6 T 14-10-2018 IPR005824 KOW BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 Gene3D G3DSA:2.30.30.30 122 180 2.3E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BD65_1656 ffe74934ae29f65cdf55a2a0bee9b1fd 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 8.2E-70 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BD65_817 496b8dc2c64fa3ac3c01e34055ab024d 87 Gene3D G3DSA:3.10.20.30 2 87 1.1E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_817 496b8dc2c64fa3ac3c01e34055ab024d 87 SUPERFAMILY SSF54292 6 86 3.54E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BD65_817 496b8dc2c64fa3ac3c01e34055ab024d 87 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BD65_817 496b8dc2c64fa3ac3c01e34055ab024d 87 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 79 1.3E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BD65_2481 f2a352bc26402b2c4845333d84320426 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 43.013 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BD65_2481 f2a352bc26402b2c4845333d84320426 460 SUPERFAMILY SSF52540 71 291 1.02E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2481 f2a352bc26402b2c4845333d84320426 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.2E-93 T 14-10-2018 BD65_2481 f2a352bc26402b2c4845333d84320426 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.2E-93 T 14-10-2018 BD65_2481 f2a352bc26402b2c4845333d84320426 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.2E-93 T 14-10-2018 BD65_2481 f2a352bc26402b2c4845333d84320426 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.2E-93 T 14-10-2018 BD65_2481 f2a352bc26402b2c4845333d84320426 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.2E-93 T 14-10-2018 BD65_2481 f2a352bc26402b2c4845333d84320426 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.2E-93 T 14-10-2018 BD65_2481 f2a352bc26402b2c4845333d84320426 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.2E-93 T 14-10-2018 BD65_2481 f2a352bc26402b2c4845333d84320426 460 Gene3D G3DSA:3.40.50.300 70 282 7.4E-39 T 14-10-2018 BD65_2481 f2a352bc26402b2c4845333d84320426 460 SMART SM00382 94 248 3.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2481 f2a352bc26402b2c4845333d84320426 460 SUPERFAMILY SSF54211 258 457 2.77E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2481 f2a352bc26402b2c4845333d84320426 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 7.0E-233 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BD65_2481 f2a352bc26402b2c4845333d84320426 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 3.7E-9 T 14-10-2018 BD65_2481 f2a352bc26402b2c4845333d84320426 460 Gene3D G3DSA:3.30.230.10 305 460 1.6E-21 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_2481 f2a352bc26402b2c4845333d84320426 460 Pfam PF13481 AAA domain 88 225 8.4E-14 T 14-10-2018 BD65_1101 8b903e6689a0d3f709c8e0ffdcebb8ee 148 SUPERFAMILY SSF55961 1 142 2.12E-35 T 14-10-2018 BD65_1101 8b903e6689a0d3f709c8e0ffdcebb8ee 148 Gene3D G3DSA:3.30.530.20 3 144 9.9E-41 T 14-10-2018 IPR023393 START-like domain superfamily BD65_1101 8b903e6689a0d3f709c8e0ffdcebb8ee 148 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 4.7E-32 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 BD65_2567 28a433ff47a8c39435605356e2175c94 66 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 7.4E-25 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 BD65_2567 28a433ff47a8c39435605356e2175c94 66 SUPERFAMILY SSF57716 6 64 6.49E-22 T 14-10-2018 BD65_2567 28a433ff47a8c39435605356e2175c94 66 Gene3D G3DSA:3.30.50.10 2 66 4.8E-26 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 BD65_2567 28a433ff47a8c39435605356e2175c94 66 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.479 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 BD65_2230 36b24613b794edc4fbba17e3f435aac6 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.2E-52 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2230 36b24613b794edc4fbba17e3f435aac6 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 5.1E-33 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2230 36b24613b794edc4fbba17e3f435aac6 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.349 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2230 36b24613b794edc4fbba17e3f435aac6 118 SUPERFAMILY SSF46946 2 114 3.68E-46 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BD65_2230 36b24613b794edc4fbba17e3f435aac6 118 Gene3D G3DSA:1.10.8.50 1 71 8.7E-28 T 14-10-2018 BD65_2230 36b24613b794edc4fbba17e3f435aac6 118 PIRSF PIRSF002134 1 118 5.4E-42 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2230 36b24613b794edc4fbba17e3f435aac6 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2230 36b24613b794edc4fbba17e3f435aac6 118 Gene3D G3DSA:4.10.910.10 72 118 2.3E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_482 be500c3a9e1129e8a2ac31afd9ef8608 253 Pfam PF00005 ABC transporter 15 164 8.7E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_482 be500c3a9e1129e8a2ac31afd9ef8608 253 SMART SM00382 23 212 1.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_482 be500c3a9e1129e8a2ac31afd9ef8608 253 SUPERFAMILY SSF52540 15 227 1.3E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_482 be500c3a9e1129e8a2ac31afd9ef8608 253 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 2 250 44.922 T 14-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 BD65_482 be500c3a9e1129e8a2ac31afd9ef8608 253 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_482 be500c3a9e1129e8a2ac31afd9ef8608 253 Gene3D G3DSA:3.40.50.300 5 251 1.5E-52 T 14-10-2018 BD65_1417 9faf5d3cac8aa92705a32d6f67cfd256 400 Pfam PF01420 Type I restriction modification DNA specificity domain 15 172 1.6E-16 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 BD65_1417 9faf5d3cac8aa92705a32d6f67cfd256 400 Pfam PF01420 Type I restriction modification DNA specificity domain 213 374 3.7E-19 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 BD65_1417 9faf5d3cac8aa92705a32d6f67cfd256 400 Gene3D G3DSA:3.90.220.20 13 141 3.6E-20 T 14-10-2018 BD65_1417 9faf5d3cac8aa92705a32d6f67cfd256 400 SUPERFAMILY SSF116734 195 390 1.41E-33 T 14-10-2018 BD65_1417 9faf5d3cac8aa92705a32d6f67cfd256 400 SUPERFAMILY SSF116734 12 192 1.26E-29 T 14-10-2018 BD65_1417 9faf5d3cac8aa92705a32d6f67cfd256 400 Gene3D G3DSA:1.10.287.1120 343 360 1.6E-29 T 14-10-2018 BD65_1417 9faf5d3cac8aa92705a32d6f67cfd256 400 Gene3D G3DSA:3.90.220.20 198 342 1.6E-29 T 14-10-2018 BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 Gene3D G3DSA:1.20.120.140 229 525 1.1E-116 T 14-10-2018 BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 255 526 1.1E-114 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 SMART SM00382 325 516 1.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 SUPERFAMILY SSF47364 227 306 6.15E-22 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 Pfam PF02881 SRP54-type protein, helical bundle domain 243 308 4.9E-13 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 255 527 65.077 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 SUPERFAMILY SSF52540 322 526 5.72E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 Pfam PF00448 SRP54-type protein, GTPase domain 327 526 2.6E-77 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 SMART SM00962 326 527 1.3E-122 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 500 513 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 SMART SM00963 232 312 5.2E-25 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BD65_1722 9473317a8bac07686b7c4ae3f518263d 530 Gene3D G3DSA:3.40.50.300 326 515 1.1E-116 T 14-10-2018 BD65_66 3823fb673c65e63a7e46198366262cd1 117 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 14-10-2018 IPR019808 Histidine triad, conserved site BD65_66 3823fb673c65e63a7e46198366262cd1 117 SUPERFAMILY SSF54197 3 112 2.01E-35 T 14-10-2018 IPR036265 HIT-like superfamily BD65_66 3823fb673c65e63a7e46198366262cd1 117 Gene3D G3DSA:3.30.428.10 1 111 2.6E-35 T 14-10-2018 IPR036265 HIT-like superfamily BD65_66 3823fb673c65e63a7e46198366262cd1 117 PRINTS PR00332 Histidine triad family signature 6 22 1.3E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein BD65_66 3823fb673c65e63a7e46198366262cd1 117 PRINTS PR00332 Histidine triad family signature 95 105 1.3E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein BD65_66 3823fb673c65e63a7e46198366262cd1 117 PRINTS PR00332 Histidine triad family signature 27 45 1.3E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein BD65_66 3823fb673c65e63a7e46198366262cd1 117 Pfam PF01230 HIT domain 12 108 6.3E-29 T 14-10-2018 IPR001310 Histidine triad (HIT) protein BD65_663 ac2dcd2b56aa621c1debd83ee4f4497a 169 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 91 167 1.9E-7 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BD65_663 ac2dcd2b56aa621c1debd83ee4f4497a 169 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 167 8.9E-97 T 14-10-2018 IPR022523 Flagellar regulator, FliZ BD65_1375 493f4c712b626e5d335db393c833e086 740 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 28 643 50.677 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 BD65_1375 493f4c712b626e5d335db393c833e086 740 SUPERFAMILY SSF102114 373 617 1.57E-10 T 14-10-2018 BD65_1375 493f4c712b626e5d335db393c833e086 740 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 28 641 1.5E-266 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 BD65_1375 493f4c712b626e5d335db393c833e086 740 SMART SM00729 373 623 3.7E-5 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BD65_1375 493f4c712b626e5d335db393c833e086 740 Pfam PF04055 Radical SAM superfamily 377 582 1.3E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_1375 493f4c712b626e5d335db393c833e086 740 Pfam PF11842 Domain of unknown function (DUF3362) 591 727 1.1E-43 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal BD65_1375 493f4c712b626e5d335db393c833e086 740 Pfam PF08497 Radical SAM N-terminal 28 376 5.6E-147 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal BD65_1375 493f4c712b626e5d335db393c833e086 740 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 377 397 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BD65_1375 493f4c712b626e5d335db393c833e086 740 Gene3D G3DSA:3.80.30.20 372 624 1.1E-12 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.8E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 SUPERFAMILY SSF53822 60 334 1.43E-84 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.6E-33 T 14-10-2018 BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 Gene3D G3DSA:3.40.50.2300 160 289 4.4E-71 T 14-10-2018 BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 Gene3D G3DSA:1.10.260.40 3 59 2.7E-21 T 14-10-2018 BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 Gene3D G3DSA:3.40.50.2300 62 306 4.4E-71 T 14-10-2018 BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 SUPERFAMILY SSF47413 1 59 9.64E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_1235 808b9587683ed7c8e6c8017feb45837a 340 SMART SM00354 1 71 4.4E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BD65_2274 2db154e247566b018953f98ae440abaf 104 SUPERFAMILY SSF103481 6 103 7.59E-20 T 14-10-2018 BD65_2274 2db154e247566b018953f98ae440abaf 104 Gene3D G3DSA:1.10.3730.20 1 104 1.3E-31 T 14-10-2018 BD65_2274 2db154e247566b018953f98ae440abaf 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.7E-31 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BD65_2434 eb44a659975a3521f3816d95cb736d1e 520 Pfam PF00884 Sulfatase 47 399 3.7E-54 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BD65_2434 eb44a659975a3521f3816d95cb736d1e 520 Gene3D G3DSA:3.30.1120.10 427 513 8.7E-23 T 14-10-2018 BD65_2434 eb44a659975a3521f3816d95cb736d1e 520 Gene3D G3DSA:3.40.720.10 47 419 4.4E-101 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BD65_2434 eb44a659975a3521f3816d95cb736d1e 520 SUPERFAMILY SSF53649 45 492 9.29E-96 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BD65_2407 ff443c53c8cfc3f399ff50aa8a8bd8bc 68 Gene3D G3DSA:1.10.238.160 11 67 7.2E-14 T 14-10-2018 BD65_2407 ff443c53c8cfc3f399ff50aa8a8bd8bc 68 Pfam PF12728 Helix-turn-helix domain 20 62 1.1E-8 T 14-10-2018 BD65_669 a184dfd8bfe21aea39fbecf46740b6eb 132 SUPERFAMILY SSF101116 8 130 5.89E-41 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 BD65_669 a184dfd8bfe21aea39fbecf46740b6eb 132 Pfam PF02561 Flagellar protein FliS 8 125 1.4E-39 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BD65_669 a184dfd8bfe21aea39fbecf46740b6eb 132 PIRSF PIRSF039090 1 132 5.9E-43 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BD65_669 a184dfd8bfe21aea39fbecf46740b6eb 132 Gene3D G3DSA:1.20.120.340 2 128 8.5E-42 T 14-10-2018 BD65_669 a184dfd8bfe21aea39fbecf46740b6eb 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 2.0E-39 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BD65_2729 c0ae463b59bc35e9371a54d0cf9cff26 447 PIRSF PIRSF004539 1 447 6.9E-184 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BD65_2729 c0ae463b59bc35e9371a54d0cf9cff26 447 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 443 6.3E-159 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BD65_2729 c0ae463b59bc35e9371a54d0cf9cff26 447 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 379 8.2E-150 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BD65_2694 01ee916cf481a6c6e28b94e140f9a44b 120 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 102 4.5E-25 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 BD65_2694 01ee916cf481a6c6e28b94e140f9a44b 120 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_2694 01ee916cf481a6c6e28b94e140f9a44b 120 Gene3D G3DSA:3.30.1300.30 29 120 1.1E-30 T 14-10-2018 BD65_2694 01ee916cf481a6c6e28b94e140f9a44b 120 SUPERFAMILY SSF54523 37 118 2.9E-26 T 14-10-2018 BD65_2694 01ee916cf481a6c6e28b94e140f9a44b 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.2E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_2694 01ee916cf481a6c6e28b94e140f9a44b 120 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 1.3E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_2694 01ee916cf481a6c6e28b94e140f9a44b 120 Pfam PF02501 Type II secretion system (T2SS), protein I 39 116 1.0E-24 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 BD65_218 a4d152df78a135b7c55135b27579eaf2 862 Pfam PF13185 GAF domain 280 423 2.6E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 BD65_218 a4d152df78a135b7c55135b27579eaf2 862 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 263 2.1E-7 T 14-10-2018 IPR000014 PAS domain BD65_218 a4d152df78a135b7c55135b27579eaf2 862 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 25 139 4.2E-14 T 14-10-2018 IPR000014 PAS domain BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SMART SM00091 147 216 0.29 T 14-10-2018 IPR000014 PAS domain BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SMART SM00091 18 88 0.04 T 14-10-2018 IPR000014 PAS domain BD65_218 a4d152df78a135b7c55135b27579eaf2 862 Gene3D G3DSA:3.20.20.450 609 860 2.6E-92 T 14-10-2018 IPR035919 EAL domain superfamily BD65_218 a4d152df78a135b7c55135b27579eaf2 862 Pfam PF13426 PAS domain 159 260 2.2E-9 T 14-10-2018 IPR000014 PAS domain BD65_218 a4d152df78a135b7c55135b27579eaf2 862 Gene3D G3DSA:3.30.450.40 272 425 2.3E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily BD65_218 a4d152df78a135b7c55135b27579eaf2 862 Gene3D G3DSA:3.30.70.270 429 608 1.9E-51 T 14-10-2018 BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SUPERFAMILY SSF55073 440 596 1.8E-44 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SMART SM00267 424 595 5.1E-48 T 14-10-2018 IPR000160 GGDEF domain BD65_218 a4d152df78a135b7c55135b27579eaf2 862 Pfam PF08447 PAS fold 43 129 1.8E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BD65_218 a4d152df78a135b7c55135b27579eaf2 862 PIRSF PIRSF005925 136 862 4.4E-242 T 14-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase BD65_218 a4d152df78a135b7c55135b27579eaf2 862 PIRSF PIRSF005925 11 151 7.2E-6 T 14-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SMART SM00052 605 851 1.8E-105 T 14-10-2018 IPR001633 EAL domain BD65_218 a4d152df78a135b7c55135b27579eaf2 862 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 432 593 3.2E-35 T 14-10-2018 IPR000160 GGDEF domain BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SMART SM00065 281 432 6.2E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SUPERFAMILY SSF141868 610 859 1.57E-82 T 14-10-2018 IPR035919 EAL domain superfamily BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SUPERFAMILY SSF55781 283 435 5.67E-21 T 14-10-2018 BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SMART SM00086 93 135 1.4E-4 T 14-10-2018 IPR001610 PAC motif BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SMART SM00086 220 262 21.0 T 14-10-2018 IPR001610 PAC motif BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SUPERFAMILY SSF55785 132 260 4.35E-12 T 14-10-2018 IPR035965 PAS domain superfamily BD65_218 a4d152df78a135b7c55135b27579eaf2 862 Gene3D G3DSA:3.30.450.20 144 271 3.4E-15 T 14-10-2018 BD65_218 a4d152df78a135b7c55135b27579eaf2 862 Gene3D G3DSA:3.30.450.20 11 143 1.1E-20 T 14-10-2018 BD65_218 a4d152df78a135b7c55135b27579eaf2 862 SUPERFAMILY SSF55785 28 132 8.38E-22 T 14-10-2018 IPR035965 PAS domain superfamily BD65_218 a4d152df78a135b7c55135b27579eaf2 862 Pfam PF00990 Diguanylate cyclase, GGDEF domain 435 590 2.2E-41 T 14-10-2018 IPR000160 GGDEF domain BD65_218 a4d152df78a135b7c55135b27579eaf2 862 Pfam PF00563 EAL domain 611 846 7.7E-71 T 14-10-2018 IPR001633 EAL domain BD65_299 7dd4c041b069833becd1a5101e8aaacd 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 47.58 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BD65_299 7dd4c041b069833becd1a5101e8aaacd 196 Pfam PF00925 GTP cyclohydrolase II 5 170 3.9E-67 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BD65_299 7dd4c041b069833becd1a5101e8aaacd 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 2.8E-90 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BD65_299 7dd4c041b069833becd1a5101e8aaacd 196 Gene3D G3DSA:3.40.50.10990 1 174 5.9E-76 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BD65_299 7dd4c041b069833becd1a5101e8aaacd 196 SUPERFAMILY SSF142695 3 173 1.96E-65 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BD65_1518 cc6c174d7906580ed7f2d5fb24f4160c 283 SUPERFAMILY SSF52540 2 151 1.98E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1518 cc6c174d7906580ed7f2d5fb24f4160c 283 PIRSF PIRSF005052 1 283 1.6E-113 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 BD65_1518 cc6c174d7906580ed7f2d5fb24f4160c 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.816 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 BD65_1518 cc6c174d7906580ed7f2d5fb24f4160c 283 Pfam PF03668 P-loop ATPase protein family 1 282 2.8E-142 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 BD65_3205 efa5c5436f4da1368e312569322041f2 238 Gene3D G3DSA:1.10.3720.10 2 233 6.5E-47 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3205 efa5c5436f4da1368e312569322041f2 238 SUPERFAMILY SSF161098 7 216 2.62E-36 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3205 efa5c5436f4da1368e312569322041f2 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 230 7.5E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_3205 efa5c5436f4da1368e312569322041f2 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 78 6.4E-13 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BD65_570 7c9f44e55d66b9a5479116957344ffbc 376 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 333 352 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BD65_570 7c9f44e55d66b9a5479116957344ffbc 376 SUPERFAMILY SSF56645 3 237 1.18E-67 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BD65_570 7c9f44e55d66b9a5479116957344ffbc 376 Gene3D G3DSA:1.20.140.10 234 376 3.6E-36 T 14-10-2018 BD65_570 7c9f44e55d66b9a5479116957344ffbc 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 214 2.0E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BD65_570 7c9f44e55d66b9a5479116957344ffbc 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 115 5.8E-26 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BD65_570 7c9f44e55d66b9a5479116957344ffbc 376 SUPERFAMILY SSF47203 225 374 3.38E-37 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BD65_570 7c9f44e55d66b9a5479116957344ffbc 376 Gene3D G3DSA:1.10.540.10 1 117 1.8E-26 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BD65_570 7c9f44e55d66b9a5479116957344ffbc 376 Gene3D G3DSA:2.40.110.10 118 233 2.3E-36 T 14-10-2018 BD65_570 7c9f44e55d66b9a5479116957344ffbc 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 374 6.1E-35 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BD65_2842 db8c30e899f3a37505eed86d686a705b 346 SUPERFAMILY SSF53686 21 333 1.44E-69 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BD65_2842 db8c30e899f3a37505eed86d686a705b 346 Gene3D G3DSA:3.40.50.1100 49 155 3.4E-69 T 14-10-2018 BD65_2842 db8c30e899f3a37505eed86d686a705b 346 Gene3D G3DSA:3.40.50.1100 22 322 3.4E-69 T 14-10-2018 BD65_2842 db8c30e899f3a37505eed86d686a705b 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 314 2.0E-42 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BD65_273 106a84e8836f3d225e97e15c76a88c2c 244 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 166 227 9.8E-16 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 BD65_273 106a84e8836f3d225e97e15c76a88c2c 244 Gene3D G3DSA:3.30.2420.10 156 244 2.5E-27 T 14-10-2018 BD65_273 106a84e8836f3d225e97e15c76a88c2c 244 SUPERFAMILY SSF74653 162 229 5.1E-18 T 14-10-2018 BD65_273 106a84e8836f3d225e97e15c76a88c2c 244 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 167 228 6.9E-17 T 14-10-2018 IPR006260 TonB/TolA, C-terminal BD65_273 106a84e8836f3d225e97e15c76a88c2c 244 Pfam PF16031 TonB N-terminal region 38 163 7.5E-21 T 14-10-2018 BD65_273 106a84e8836f3d225e97e15c76a88c2c 244 PRINTS PR01374 Gram-negative bacterial tonB protein signature 182 200 1.3E-30 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BD65_273 106a84e8836f3d225e97e15c76a88c2c 244 PRINTS PR01374 Gram-negative bacterial tonB protein signature 95 105 1.3E-30 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BD65_273 106a84e8836f3d225e97e15c76a88c2c 244 PRINTS PR01374 Gram-negative bacterial tonB protein signature 201 218 1.3E-30 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BD65_273 106a84e8836f3d225e97e15c76a88c2c 244 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 182 1.3E-30 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BD65_136 fb45f583302f5c4a1caf13e362f5ded4 76 Gene3D G3DSA:2.10.260.10 1 73 8.1E-16 T 14-10-2018 BD65_136 fb45f583302f5c4a1caf13e362f5ded4 76 SUPERFAMILY SSF89447 3 68 1.36E-11 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily BD65_136 fb45f583302f5c4a1caf13e362f5ded4 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 50 3.4E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BD65_136 fb45f583302f5c4a1caf13e362f5ded4 76 SMART SM00966 7 48 2.1E-5 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 SUPERFAMILY SSF56425 236 356 4.78E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 Gene3D G3DSA:3.50.50.60 9 416 9.4E-172 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 5.0E-35 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 SUPERFAMILY SSF51905 4 442 2.44E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 Gene3D G3DSA:4.10.80.40 548 588 9.3E-25 T 14-10-2018 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 Gene3D G3DSA:1.20.58.100 431 547 3.8E-39 T 14-10-2018 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 Gene3D G3DSA:3.90.700.10 246 350 9.4E-172 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 4.2E-276 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 PIRSF PIRSF000171 1 580 6.7E-46 T 14-10-2018 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 4.7E-242 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.0E-5 T 14-10-2018 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.0E-5 T 14-10-2018 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 SUPERFAMILY SSF46977 452 588 2.62E-45 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3029 fc9755e3b01a80f2b4ab15178d8df6bf 588 Pfam PF00890 FAD binding domain 9 405 5.8E-118 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_604 bf2cd73eb988e616877c9cb27d880251 70 PRINTS PR00050 Cold shock protein signature 43 61 1.6E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_604 bf2cd73eb988e616877c9cb27d880251 70 PRINTS PR00050 Cold shock protein signature 7 22 1.6E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_604 bf2cd73eb988e616877c9cb27d880251 70 PRINTS PR00050 Cold shock protein signature 28 37 1.6E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_604 bf2cd73eb988e616877c9cb27d880251 70 SMART SM00357 6 70 7.2E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_604 bf2cd73eb988e616877c9cb27d880251 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site BD65_604 bf2cd73eb988e616877c9cb27d880251 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.1E-32 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_604 bf2cd73eb988e616877c9cb27d880251 70 SUPERFAMILY SSF50249 3 69 8.57E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_604 bf2cd73eb988e616877c9cb27d880251 70 Gene3D G3DSA:2.40.50.140 2 69 6.3E-29 T 14-10-2018 BD65_604 bf2cd73eb988e616877c9cb27d880251 70 PIRSF PIRSF002599 1 70 3.6E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 Gene3D G3DSA:3.30.70.330 489 562 4.4E-9 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 Pfam PF00271 Helicase conserved C-terminal domain 234 342 6.8E-29 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 Gene3D G3DSA:3.40.50.300 2 213 1.1E-76 T 14-10-2018 BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 Pfam PF12343 Cold shock protein DEAD box A 584 656 1.8E-20 T 14-10-2018 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 SMART SM00490 261 342 1.1E-31 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 Pfam PF03880 DbpA RNA binding domain 492 561 2.5E-19 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 Gene3D G3DSA:3.40.50.300 216 433 4.0E-49 T 14-10-2018 BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 Pfam PF00270 DEAD/DEAH box helicase 32 196 9.3E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 SUPERFAMILY SSF52540 5 210 7.29E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 563 46.74 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 SMART SM00487 26 224 2.4E-64 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_2361 7ab3aa5bc22bb9fe0f5d988adc095e31 656 SUPERFAMILY SSF52540 148 356 1.78E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 SUPERFAMILY SSF50677 198 372 1.23E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 PRINTS PR00986 Valyl-tRNA synthetase signature 507 525 2.0E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 2.0E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 PRINTS PR00986 Valyl-tRNA synthetase signature 376 389 2.0E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 PRINTS PR00986 Valyl-tRNA synthetase signature 476 497 2.0E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 PRINTS PR00986 Valyl-tRNA synthetase signature 243 260 2.0E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 SUPERFAMILY SSF52374 8 648 9.25E-136 T 14-10-2018 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 Gene3D G3DSA:3.40.50.620 349 562 6.6E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 Gene3D G3DSA:3.90.740.10 212 248 2.2E-5 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 Gene3D G3DSA:3.90.740.10 249 348 6.0E-12 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 Gene3D G3DSA:3.40.50.620 10 208 5.3E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 956 16.14 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 937 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 893 951 8.6E-17 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 Pfam PF08264 Anticodon-binding domain of tRNA 681 832 1.2E-42 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 SUPERFAMILY SSF47323 649 906 7.85E-71 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 21 638 2.1E-229 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 Gene3D G3DSA:1.10.287.380 884 955 1.2E-18 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 SUPERFAMILY SSF46589 891 954 3.61E-15 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BD65_2390 8f4073bc23ff8661219eae521d8f4147 958 Gene3D G3DSA:1.10.730.10 582 824 8.8E-72 T 14-10-2018 BD65_489 1aa1ef7f124d647b1bbeca96da249093 216 Pfam PF04717 Type VI secretion system, phage-baseplate injector 4 117 1.7E-36 T 14-10-2018 IPR006531 Gp5 N-terminal BD65_489 1aa1ef7f124d647b1bbeca96da249093 216 Gene3D G3DSA:2.60.220.40 89 161 8.0E-25 T 14-10-2018 BD65_489 1aa1ef7f124d647b1bbeca96da249093 216 Gene3D G3DSA:2.40.50.230 2 87 7.1E-29 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily BD65_489 1aa1ef7f124d647b1bbeca96da249093 216 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 200 9.7E-48 T 14-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 BD65_1200 cf5b7311e05ed32e1a4cd0bca4f65927 149 Gene3D G3DSA:3.40.50.360 1 149 1.1E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_1200 cf5b7311e05ed32e1a4cd0bca4f65927 149 Pfam PF00258 Flavodoxin 6 136 3.3E-21 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BD65_1200 cf5b7311e05ed32e1a4cd0bca4f65927 149 SUPERFAMILY SSF52218 1 148 3.1E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_1200 cf5b7311e05ed32e1a4cd0bca4f65927 149 PRINTS PR00369 Flavodoxin signature 108 127 5.0E-7 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_1200 cf5b7311e05ed32e1a4cd0bca4f65927 149 PRINTS PR00369 Flavodoxin signature 84 94 5.0E-7 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_1200 cf5b7311e05ed32e1a4cd0bca4f65927 149 PRINTS PR00369 Flavodoxin signature 53 64 5.0E-7 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BD65_967 9f2b52739584fd3447fdfab4d22aee79 192 Gene3D G3DSA:3.90.79.10 2 189 1.2E-59 T 14-10-2018 BD65_967 9f2b52739584fd3447fdfab4d22aee79 192 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 8 185 1.6E-60 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 BD65_967 9f2b52739584fd3447fdfab4d22aee79 192 SUPERFAMILY SSF55811 8 188 1.31E-51 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_967 9f2b52739584fd3447fdfab4d22aee79 192 Pfam PF00293 NUDIX domain 44 167 5.8E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_1812 ff4f4c77a8bd785d3131357d64a96e45 243 Pfam PF08534 Redoxin 5 160 9.8E-34 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BD65_1812 ff4f4c77a8bd785d3131357d64a96e45 243 Pfam PF00462 Glutaredoxin 173 231 1.1E-19 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BD65_1812 ff4f4c77a8bd785d3131357d64a96e45 243 PRINTS PR00160 Glutaredoxin signature 228 241 6.4E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup BD65_1812 ff4f4c77a8bd785d3131357d64a96e45 243 PRINTS PR00160 Glutaredoxin signature 214 227 6.4E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup BD65_1812 ff4f4c77a8bd785d3131357d64a96e45 243 PRINTS PR00160 Glutaredoxin signature 173 191 6.4E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup BD65_1812 ff4f4c77a8bd785d3131357d64a96e45 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 BD65_1812 ff4f4c77a8bd785d3131357d64a96e45 243 Gene3D G3DSA:3.40.30.10 171 242 1.4E-24 T 14-10-2018 BD65_1812 ff4f4c77a8bd785d3131357d64a96e45 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 8.0E-41 T 14-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 BD65_1812 ff4f4c77a8bd785d3131357d64a96e45 243 SUPERFAMILY SSF52833 2 241 6.94E-47 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1812 ff4f4c77a8bd785d3131357d64a96e45 243 Gene3D G3DSA:3.40.30.10 4 165 1.5E-62 T 14-10-2018 BD65_1233 ee79092922a15a23ed9323d676230f70 392 Gene3D G3DSA:1.20.1250.20 3 383 9.2E-21 T 14-10-2018 BD65_1233 ee79092922a15a23ed9323d676230f70 392 Pfam PF07690 Major Facilitator Superfamily 12 339 4.5E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_1233 ee79092922a15a23ed9323d676230f70 392 SUPERFAMILY SSF103473 9 385 8.76E-22 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_1233 ee79092922a15a23ed9323d676230f70 392 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 387 39.168 T 14-10-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 BD65_2828 8115e7574a35f24d62ead91b5def5d67 492 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 1.9E-118 T 14-10-2018 BD65_2828 8115e7574a35f24d62ead91b5def5d67 492 Pfam PF07690 Major Facilitator Superfamily 18 366 6.7E-32 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2828 8115e7574a35f24d62ead91b5def5d67 492 SUPERFAMILY SSF103473 8 404 2.88E-44 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_2828 8115e7574a35f24d62ead91b5def5d67 492 Gene3D G3DSA:1.20.1250.20 4 197 1.6E-17 T 14-10-2018 BD65_2828 8115e7574a35f24d62ead91b5def5d67 492 Gene3D G3DSA:1.20.1250.20 213 407 1.2E-14 T 14-10-2018 BD65_1353 b8e7262f0c6dd8dfa8db1cf0ed4840c5 187 Gene3D G3DSA:1.10.10.10 1 105 1.5E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1353 b8e7262f0c6dd8dfa8db1cf0ed4840c5 187 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 101 1.8E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_1353 b8e7262f0c6dd8dfa8db1cf0ed4840c5 187 SUPERFAMILY SSF46894 14 103 1.66E-7 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2152 41f9933247d167889e4ad7c73db19a95 286 Gene3D G3DSA:3.30.420.40 8 170 1.4E-11 T 14-10-2018 BD65_2152 41f9933247d167889e4ad7c73db19a95 286 Gene3D G3DSA:3.30.1490.300 82 137 1.4E-11 T 14-10-2018 BD65_2152 41f9933247d167889e4ad7c73db19a95 286 Pfam PF11104 Type IV pilus assembly protein PilM; 9 167 1.5E-16 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM BD65_3096 ad1e8956a7fe2b0b17d1057d747b5fdc 311 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 265 5.3E-78 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BD65_3096 ad1e8956a7fe2b0b17d1057d747b5fdc 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 5.3E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BD65_3096 ad1e8956a7fe2b0b17d1057d747b5fdc 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 5.3E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BD65_3096 ad1e8956a7fe2b0b17d1057d747b5fdc 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 5.3E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BD65_3096 ad1e8956a7fe2b0b17d1057d747b5fdc 311 Gene3D G3DSA:3.40.710.10 23 307 6.1E-65 T 14-10-2018 BD65_3096 ad1e8956a7fe2b0b17d1057d747b5fdc 311 SUPERFAMILY SSF56601 5 281 1.08E-61 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_2982 f16cd099df0b264fcd5b2bf04b2af649 351 Gene3D G3DSA:3.40.50.300 115 321 3.2E-74 T 14-10-2018 BD65_2982 f16cd099df0b264fcd5b2bf04b2af649 351 SUPERFAMILY SSF52540 117 293 2.37E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2982 f16cd099df0b264fcd5b2bf04b2af649 351 Pfam PF02562 PhoH-like protein 118 321 2.8E-94 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 BD65_1557 e19cf0e62458c866c6744ebd245ba475 484 Pfam PF00474 Sodium:solute symporter family 36 432 7.2E-133 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BD65_1557 e19cf0e62458c866c6744ebd245ba475 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site BD65_1557 e19cf0e62458c866c6744ebd245ba475 484 Gene3D G3DSA:1.20.1730.10 25 480 1.2E-84 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily BD65_1557 e19cf0e62458c866c6744ebd245ba475 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 3.0E-109 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BD65_1557 e19cf0e62458c866c6744ebd245ba475 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 7.1E-239 T 14-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 BD65_1557 e19cf0e62458c866c6744ebd245ba475 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.334 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 SUPERFAMILY SSF50249 2 125 1.1E-50 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 Gene3D G3DSA:4.10.950.10 196 273 5.2E-37 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.9E-34 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 PIRSF PIRSF002158 12 274 2.3E-100 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 SMART SM01382 124 251 4.1E-90 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 1.1E-131 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 3.0E-55 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 Gene3D G3DSA:2.40.50.140 1 114 4.6E-51 T 14-10-2018 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 Gene3D G3DSA:2.30.30.30 115 195 4.3E-33 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 SMART SM01383 42 118 3.6E-48 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2211 6217cbf14a2732c102ed6fdcb7193770 274 SUPERFAMILY SSF50104 127 269 1.08E-59 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BD65_266 72401fd77fcf644e070c4e4a7e72bd6c 265 SUPERFAMILY SSF46894 25 103 3.68E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_266 72401fd77fcf644e070c4e4a7e72bd6c 265 SMART SM00862 26 103 4.5E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_266 72401fd77fcf644e070c4e4a7e72bd6c 265 Gene3D G3DSA:1.10.10.10 7 105 1.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_266 72401fd77fcf644e070c4e4a7e72bd6c 265 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 103 7.6E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_142 56152cdbd47bf5ced4e027489d97c0d4 90 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 3.2E-46 T 14-10-2018 IPR019698 Protein of unknown function DUF2583 BD65_24 8586315c0a344540e67a5e28c2719521 395 SMART SM00359 2 87 4.3E-14 T 14-10-2018 IPR002478 PUA domain GO:0003723 BD65_24 8586315c0a344540e67a5e28c2719521 395 Gene3D G3DSA:3.40.50.150 181 395 2.5E-71 T 14-10-2018 BD65_24 8586315c0a344540e67a5e28c2719521 395 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 183 370 1.4E-29 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BD65_24 8586315c0a344540e67a5e28c2719521 395 SUPERFAMILY SSF88697 1 68 1.08E-15 T 14-10-2018 IPR015947 PUA-like superfamily BD65_24 8586315c0a344540e67a5e28c2719521 395 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 395 67.671 T 14-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 BD65_24 8586315c0a344540e67a5e28c2719521 395 Gene3D G3DSA:2.30.130.10 2 71 9.0E-29 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 BD65_24 8586315c0a344540e67a5e28c2719521 395 Gene3D G3DSA:3.30.750.80 72 180 1.3E-36 T 14-10-2018 BD65_24 8586315c0a344540e67a5e28c2719521 395 SUPERFAMILY SSF53335 78 391 5.72E-71 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1903 a015fcfbee5c3148c8238075cab86799 273 SUPERFAMILY SSF51161 8 260 1.32E-66 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BD65_1903 a015fcfbee5c3148c8238075cab86799 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BD65_1903 a015fcfbee5c3148c8238075cab86799 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.2E-10 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_1903 a015fcfbee5c3148c8238075cab86799 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 2.6E-73 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BD65_1903 a015fcfbee5c3148c8238075cab86799 273 SMART SM00971 9 113 2.2E-61 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BD65_1903 a015fcfbee5c3148c8238075cab86799 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 5.1E-37 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BD65_1903 a015fcfbee5c3148c8238075cab86799 273 PIRSF PIRSF000441 75 266 2.8E-59 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BD65_1903 a015fcfbee5c3148c8238075cab86799 273 Gene3D G3DSA:2.160.10.10 143 273 3.0E-38 T 14-10-2018 BD65_1903 a015fcfbee5c3148c8238075cab86799 273 Gene3D G3DSA:1.10.3130.10 1 142 4.0E-53 T 14-10-2018 BD65_2194 51debcf5b0a9485f61770cb3a38ad65c 199 Gene3D G3DSA:3.10.50.40 3 154 2.8E-60 T 14-10-2018 BD65_2194 51debcf5b0a9485f61770cb3a38ad65c 199 SUPERFAMILY SSF54534 2 140 1.87E-32 T 14-10-2018 BD65_2194 51debcf5b0a9485f61770cb3a38ad65c 199 Gene3D G3DSA:2.40.10.330 71 121 2.8E-60 T 14-10-2018 BD65_2194 51debcf5b0a9485f61770cb3a38ad65c 199 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 2.0E-8 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BD65_1938 95887177c283af69ca7efab5965e76e3 91 Pfam PF01192 RNA polymerase Rpb6 10 60 8.2E-17 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BD65_1938 95887177c283af69ca7efab5965e76e3 91 Gene3D G3DSA:3.90.940.10 1 91 1.3E-30 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BD65_1938 95887177c283af69ca7efab5965e76e3 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.1E-28 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1938 95887177c283af69ca7efab5965e76e3 91 SMART SM01409 8 61 1.0E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BD65_1938 95887177c283af69ca7efab5965e76e3 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.134 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BD65_1938 95887177c283af69ca7efab5965e76e3 91 SUPERFAMILY SSF63562 1 79 2.44E-25 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BD65_2816 59d02a4f70ab84b057bb8817b52ddf11 413 Pfam PF13343 Bacterial extracellular solute-binding protein 74 301 2.5E-25 T 14-10-2018 BD65_2816 59d02a4f70ab84b057bb8817b52ddf11 413 Gene3D G3DSA:3.40.190.10 126 241 1.4E-27 T 14-10-2018 BD65_2816 59d02a4f70ab84b057bb8817b52ddf11 413 Gene3D G3DSA:3.40.190.10 59 288 1.4E-27 T 14-10-2018 BD65_2816 59d02a4f70ab84b057bb8817b52ddf11 413 SUPERFAMILY SSF53850 24 325 5.2E-36 T 14-10-2018 BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 Gene3D G3DSA:3.40.250.10 107 223 8.3E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 Pfam PF12840 Helix-turn-helix domain 18 75 1.9E-8 T 14-10-2018 BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 Pfam PF00581 Rhodanese-like domain 124 215 1.8E-16 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 SUPERFAMILY SSF46785 8 99 1.3E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 Gene3D G3DSA:1.10.10.10 3 106 2.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 SUPERFAMILY SSF52821 111 221 1.05E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 SMART SM00418 18 96 2.8E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 1.2E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 1.2E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 1.2E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 ProSitePatterns PS00380 Rhodanese signature 1. 147 158 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 BD65_575 384d9e1a876e492b08ebd59a4f44490a 223 SMART SM00450 122 218 9.2E-26 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_1823 58ea2be66a949b540c268d1838113c0c 404 SUPERFAMILY SSF69864 177 403 2.49E-86 T 14-10-2018 BD65_1823 58ea2be66a949b540c268d1838113c0c 404 Gene3D G3DSA:3.40.50.620 9 178 2.1E-142 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_1823 58ea2be66a949b540c268d1838113c0c 404 Gene3D G3DSA:3.90.1260.10 69 357 2.1E-142 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BD65_1823 58ea2be66a949b540c268d1838113c0c 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 403 50.571 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BD65_1823 58ea2be66a949b540c268d1838113c0c 404 Pfam PF00764 Arginosuccinate synthase 10 397 3.7E-142 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BD65_1823 58ea2be66a949b540c268d1838113c0c 404 Gene3D G3DSA:1.20.5.470 369 403 3.6E-7 T 14-10-2018 BD65_1823 58ea2be66a949b540c268d1838113c0c 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 396 2.0E-135 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BD65_1823 58ea2be66a949b540c268d1838113c0c 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 122 133 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BD65_1823 58ea2be66a949b540c268d1838113c0c 404 SUPERFAMILY SSF52402 8 172 1.02E-44 T 14-10-2018 BD65_1823 58ea2be66a949b540c268d1838113c0c 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BD65_3072 ed7902710b5b9fbfba5e9131314e28ad 248 Gene3D G3DSA:3.40.50.150 7 195 4.9E-33 T 14-10-2018 BD65_3072 ed7902710b5b9fbfba5e9131314e28ad 248 SUPERFAMILY SSF53335 7 242 9.76E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_3072 ed7902710b5b9fbfba5e9131314e28ad 248 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 1 247 29.698 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 BD65_3072 ed7902710b5b9fbfba5e9131314e28ad 248 Pfam PF08241 Methyltransferase domain 44 135 5.8E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BD65_3072 ed7902710b5b9fbfba5e9131314e28ad 248 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 9 247 7.6E-67 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 BD65_2110 9ea2fa34eff759420554a9b449ac5563 231 Gene3D G3DSA:2.60.120.10 11 135 1.2E-98 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_2110 9ea2fa34eff759420554a9b449ac5563 231 Pfam PF02678 Pirin 7 119 5.4E-37 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 BD65_2110 9ea2fa34eff759420554a9b449ac5563 231 PIRSF PIRSF006232 1 230 5.3E-57 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 BD65_2110 9ea2fa34eff759420554a9b449ac5563 231 SUPERFAMILY SSF51182 1 231 1.09E-78 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BD65_2110 9ea2fa34eff759420554a9b449ac5563 231 Gene3D G3DSA:2.60.120.10 7 229 1.2E-98 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_1743 6e436d692b1a04ab369f2b50d0add621 295 TIGRFAM TIGR00688 rarD: protein RarD 8 261 2.7E-98 T 14-10-2018 IPR004626 RarD protein GO:0005887 BD65_1743 6e436d692b1a04ab369f2b50d0add621 295 SUPERFAMILY SSF103481 43 145 1.7E-15 T 14-10-2018 BD65_1743 6e436d692b1a04ab369f2b50d0add621 295 SUPERFAMILY SSF103481 190 285 2.09E-7 T 14-10-2018 BD65_1743 6e436d692b1a04ab369f2b50d0add621 295 Pfam PF00892 EamA-like transporter family 9 142 3.9E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_1698 2980a34d47ef42c4aa84db4f3744cce2 317 Gene3D G3DSA:3.40.190.10 160 263 6.9E-72 T 14-10-2018 BD65_1698 2980a34d47ef42c4aa84db4f3744cce2 317 Gene3D G3DSA:1.10.10.10 1 89 2.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1698 2980a34d47ef42c4aa84db4f3744cce2 317 SUPERFAMILY SSF46785 1 109 6.53E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1698 2980a34d47ef42c4aa84db4f3744cce2 317 SUPERFAMILY SSF53850 88 291 1.71E-39 T 14-10-2018 BD65_1698 2980a34d47ef42c4aa84db4f3744cce2 317 Gene3D G3DSA:3.40.190.10 90 286 6.9E-72 T 14-10-2018 BD65_1698 2980a34d47ef42c4aa84db4f3744cce2 317 Pfam PF03466 LysR substrate binding domain 86 288 2.0E-42 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1698 2980a34d47ef42c4aa84db4f3744cce2 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1698 2980a34d47ef42c4aa84db4f3744cce2 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1698 2980a34d47ef42c4aa84db4f3744cce2 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1698 2980a34d47ef42c4aa84db4f3744cce2 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_2555 392cc31930269bcd7109bd539c36d5b2 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 386 1.0E-132 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2555 392cc31930269bcd7109bd539c36d5b2 400 Pfam PF01098 Cell cycle protein 33 387 3.5E-122 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2555 392cc31930269bcd7109bd539c36d5b2 400 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 345 369 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2555 392cc31930269bcd7109bd539c36d5b2 400 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 29 396 41.728 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2324 c0b944d5f046ee2d3f79908181c085a6 212 Pfam PF01625 Peptide methionine sulfoxide reductase 45 199 6.9E-66 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BD65_2324 c0b944d5f046ee2d3f79908181c085a6 212 SUPERFAMILY SSF55068 8 208 1.96E-81 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BD65_2324 c0b944d5f046ee2d3f79908181c085a6 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.376 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BD65_2324 c0b944d5f046ee2d3f79908181c085a6 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 4.6E-67 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BD65_2324 c0b944d5f046ee2d3f79908181c085a6 212 Gene3D G3DSA:3.30.1060.10 3 212 1.3E-86 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BD65_37 4ba4cdbf9fc736bcbe7609e49f6121d5 507 Pfam PF00854 POT family 87 459 6.4E-64 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BD65_37 4ba4cdbf9fc736bcbe7609e49f6121d5 507 SUPERFAMILY SSF103473 9 494 2.01E-32 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_37 4ba4cdbf9fc736bcbe7609e49f6121d5 507 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 7 497 4.7E-111 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BD65_37 4ba4cdbf9fc736bcbe7609e49f6121d5 507 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 75 99 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BD65_37 4ba4cdbf9fc736bcbe7609e49f6121d5 507 Gene3D G3DSA:1.20.1250.20 1 497 1.9E-153 T 14-10-2018 BD65_37 4ba4cdbf9fc736bcbe7609e49f6121d5 507 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 151 163 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BD65_2295 374e2debf61040b7b5fb31147d695129 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.7E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_2295 374e2debf61040b7b5fb31147d695129 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.7E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_2295 374e2debf61040b7b5fb31147d695129 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.7E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_2295 374e2debf61040b7b5fb31147d695129 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.1E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_2295 374e2debf61040b7b5fb31147d695129 426 Gene3D G3DSA:3.40.50.300 197 365 3.7E-39 T 14-10-2018 BD65_2295 374e2debf61040b7b5fb31147d695129 426 Gene3D G3DSA:3.40.50.11060 18 138 2.2E-36 T 14-10-2018 BD65_2295 374e2debf61040b7b5fb31147d695129 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 5.5E-29 T 14-10-2018 IPR032305 GTP-binding protein, middle domain BD65_2295 374e2debf61040b7b5fb31147d695129 426 SUPERFAMILY SSF54980 366 422 1.15E-13 T 14-10-2018 IPR035647 EF-G domain III/V-like BD65_2295 374e2debf61040b7b5fb31147d695129 426 SUPERFAMILY SSF52540 197 375 1.56E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2295 374e2debf61040b7b5fb31147d695129 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.863 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 BD65_2295 374e2debf61040b7b5fb31147d695129 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 4.1E-30 T 14-10-2018 IPR025121 GTPase HflX, N-terminal BD65_2295 374e2debf61040b7b5fb31147d695129 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 3.5E-153 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 BD65_2295 374e2debf61040b7b5fb31147d695129 426 PIRSF PIRSF006809 3 422 2.2E-148 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 BD65_1219 0cf3d040f907ca26862b24aa86145881 614 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 610 51.903 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BD65_1219 0cf3d040f907ca26862b24aa86145881 614 Gene3D G3DSA:1.10.10.1020 1 114 1.1E-35 T 14-10-2018 BD65_1219 0cf3d040f907ca26862b24aa86145881 614 SUPERFAMILY SSF52540 287 612 1.68E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1219 0cf3d040f907ca26862b24aa86145881 614 Pfam PF13604 AAA domain 161 320 8.5E-32 T 14-10-2018 BD65_1219 0cf3d040f907ca26862b24aa86145881 614 Gene3D G3DSA:3.40.50.300 485 601 3.5E-26 T 14-10-2018 BD65_1219 0cf3d040f907ca26862b24aa86145881 614 Gene3D G3DSA:3.40.50.300 370 483 4.6E-29 T 14-10-2018 BD65_1219 0cf3d040f907ca26862b24aa86145881 614 SUPERFAMILY SSF52540 5 365 6.18E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1219 0cf3d040f907ca26862b24aa86145881 614 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 5 612 8.2E-193 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BD65_1219 0cf3d040f907ca26862b24aa86145881 614 Gene3D G3DSA:3.40.50.300 115 360 1.6E-81 T 14-10-2018 BD65_1219 0cf3d040f907ca26862b24aa86145881 614 Pfam PF13538 UvrD-like helicase C-terminal domain 541 587 1.7E-15 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain BD65_84 a7473db1256684c440146fb96263439e 207 SUPERFAMILY SSF56925 26 165 1.36E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BD65_84 a7473db1256684c440146fb96263439e 207 Pfam PF13505 Outer membrane protein beta-barrel domain 6 187 6.0E-7 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel BD65_2113 6f5dc537513df52070521a81f44adf74 171 Pfam PF01202 Shikimate kinase 12 166 4.4E-15 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BD65_2113 6f5dc537513df52070521a81f44adf74 171 Gene3D G3DSA:3.40.50.300 2 169 2.8E-68 T 14-10-2018 BD65_2113 6f5dc537513df52070521a81f44adf74 171 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 165 5.0E-68 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 BD65_2113 6f5dc537513df52070521a81f44adf74 171 SUPERFAMILY SSF52540 3 167 2.95E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2113 6f5dc537513df52070521a81f44adf74 171 PRINTS PR01100 Shikimate kinase family signature 6 21 9.0E-6 T 14-10-2018 BD65_2113 6f5dc537513df52070521a81f44adf74 171 PRINTS PR01100 Shikimate kinase family signature 100 117 9.0E-6 T 14-10-2018 BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 595 609 2.8E-36 T 14-10-2018 IPR001775 GspD/PilQ family BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 371 381 2.8E-36 T 14-10-2018 IPR001775 GspD/PilQ family BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 474 484 2.8E-36 T 14-10-2018 IPR001775 GspD/PilQ family BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 439 463 2.8E-36 T 14-10-2018 IPR001775 GspD/PilQ family BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 572 590 2.8E-36 T 14-10-2018 IPR001775 GspD/PilQ family BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 Gene3D G3DSA:3.30.1370.120 48 214 4.5E-50 T 14-10-2018 IPR038591 NolW-like superfamily BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 Pfam PF00263 Bacterial type II and III secretion system protein 443 608 1.1E-47 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 Gene3D G3DSA:3.30.1370.120 218 286 4.4E-19 T 14-10-2018 IPR038591 NolW-like superfamily BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 Pfam PF03958 Bacterial type II/III secretion system short domain 294 371 1.1E-14 T 14-10-2018 IPR005644 NolW-like BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 Pfam PF03958 Bacterial type II/III secretion system short domain 220 288 1.1E-13 T 14-10-2018 IPR005644 NolW-like BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 Pfam PF03958 Bacterial type II/III secretion system short domain 155 215 1.4E-11 T 14-10-2018 IPR005644 NolW-like BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 553 586 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 Gene3D G3DSA:3.30.1370.120 287 372 1.4E-17 T 14-10-2018 IPR038591 NolW-like superfamily BD65_1252 fd7760503eaebee82729d8dcbb92bb12 674 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 58 613 5.9E-154 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 BD65_1203 f180369b84b97209be8ff769e8e397e3 188 Gene3D G3DSA:3.40.1580.20 1 181 1.3E-67 T 14-10-2018 IPR038228 Syd superfamily BD65_1203 f180369b84b97209be8ff769e8e397e3 188 Pfam PF07348 Syd protein (SUKH-2) 7 179 2.8E-71 T 14-10-2018 IPR009948 Syd GO:0009898 BD65_1203 f180369b84b97209be8ff769e8e397e3 188 Hamap MF_01104 Protein Syd [syd]. 3 181 36.459 T 14-10-2018 IPR009948 Syd GO:0009898 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 Gene3D G3DSA:1.10.10.10 341 523 4.9E-50 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1740 03709a8393a03e6a620d268f6f32088c 609 SMART SM00956 411 514 4.2E-51 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 SUPERFAMILY SSF52540 11 201 1.27E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1740 03709a8393a03e6a620d268f6f32088c 609 SUPERFAMILY SSF47819 532 607 6.32E-26 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 Gene3D G3DSA:1.10.150.80 524 609 4.9E-30 T 14-10-2018 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 Gene3D G3DSA:3.40.50.300 209 340 3.5E-44 T 14-10-2018 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 8.3E-200 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 Pfam PF00270 DEAD/DEAH box helicase 28 185 4.2E-20 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 Pfam PF00570 HRDC domain 535 601 7.2E-24 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 SMART SM00341 531 609 3.2E-25 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 Pfam PF16124 RecQ zinc-binding 343 404 1.4E-15 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BD65_1740 03709a8393a03e6a620d268f6f32088c 609 Pfam PF09382 RQC domain 406 516 7.1E-37 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 603 1.6E-267 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 Gene3D G3DSA:3.40.50.300 2 208 3.7E-87 T 14-10-2018 BD65_1740 03709a8393a03e6a620d268f6f32088c 609 SUPERFAMILY SSF52540 208 456 2.6E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1740 03709a8393a03e6a620d268f6f32088c 609 Pfam PF00271 Helicase conserved C-terminal domain 228 330 1.1E-19 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1740 03709a8393a03e6a620d268f6f32088c 609 SMART SM00487 22 218 3.8E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_1740 03709a8393a03e6a620d268f6f32088c 609 SMART SM00490 250 331 5.9E-28 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_3090 209eac3f8e152e4c0db4ddc2eb0133b3 574 SMART SM00382 28 262 9.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3090 209eac3f8e152e4c0db4ddc2eb0133b3 574 SMART SM00382 350 531 1.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3090 209eac3f8e152e4c0db4ddc2eb0133b3 574 Gene3D G3DSA:3.40.50.300 1 234 1.3E-55 T 14-10-2018 BD65_3090 209eac3f8e152e4c0db4ddc2eb0133b3 574 Gene3D G3DSA:3.40.50.300 316 552 1.6E-64 T 14-10-2018 BD65_3090 209eac3f8e152e4c0db4ddc2eb0133b3 574 Pfam PF00005 ABC transporter 342 485 8.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3090 209eac3f8e152e4c0db4ddc2eb0133b3 574 SUPERFAMILY SSF52540 324 546 3.59E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3090 209eac3f8e152e4c0db4ddc2eb0133b3 574 SUPERFAMILY SSF52540 2 222 4.34E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3090 209eac3f8e152e4c0db4ddc2eb0133b3 574 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_3090 209eac3f8e152e4c0db4ddc2eb0133b3 574 Pfam PF00005 ABC transporter 21 161 5.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_766 986830a2ed51992bc64aba2ea088fb9f 382 Pfam PF12323 Helix-turn-helix domain 1 28 2.3E-6 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain BD65_766 986830a2ed51992bc64aba2ea088fb9f 382 Pfam PF07282 Putative transposase DNA-binding domain 284 351 4.2E-24 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal BD65_766 986830a2ed51992bc64aba2ea088fb9f 382 Pfam PF01385 Probable transposase 142 255 1.5E-29 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 BD65_766 986830a2ed51992bc64aba2ea088fb9f 382 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 224 311 8.0E-12 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal BD65_95 e18fc107f2a855461bf00880d0089873 723 SUPERFAMILY SSF55486 52 713 1.1E-170 T 14-10-2018 BD65_95 e18fc107f2a855461bf00880d0089873 723 Gene3D G3DSA:1.10.1370.10 185 650 5.7E-244 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BD65_95 e18fc107f2a855461bf00880d0089873 723 Gene3D G3DSA:1.10.1370.40 75 712 5.7E-244 T 14-10-2018 BD65_95 e18fc107f2a855461bf00880d0089873 723 Pfam PF01432 Peptidase family M3 269 715 6.9E-133 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BD65_923 221dc05126e977020038bec3019058f5 245 SMART SM00850 146 244 1.0E-34 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BD65_923 221dc05126e977020038bec3019058f5 245 Pfam PF00072 Response regulator receiver domain 4 112 3.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_923 221dc05126e977020038bec3019058f5 245 SUPERFAMILY SSF52172 2 150 1.85E-27 T 14-10-2018 IPR011006 CheY-like superfamily BD65_923 221dc05126e977020038bec3019058f5 245 Gene3D G3DSA:2.40.50.40 138 206 5.7E-18 T 14-10-2018 BD65_923 221dc05126e977020038bec3019058f5 245 SMART SM00448 1 112 1.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_923 221dc05126e977020038bec3019058f5 245 Pfam PF04397 LytTr DNA-binding domain 147 243 2.6E-30 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BD65_923 221dc05126e977020038bec3019058f5 245 Gene3D G3DSA:3.40.50.2300 1 132 1.9E-29 T 14-10-2018 BD65_679 4a4cb7bce969550c70a303b2ffb720aa 454 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 372 4.8E-71 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_679 4a4cb7bce969550c70a303b2ffb720aa 454 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 450 1.5E-197 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_679 4a4cb7bce969550c70a303b2ffb720aa 454 Gene3D G3DSA:3.40.50.12240 20 454 1.2E-168 T 14-10-2018 BD65_679 4a4cb7bce969550c70a303b2ffb720aa 454 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 452 6.6E-191 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_679 4a4cb7bce969550c70a303b2ffb720aa 454 SMART SM00382 173 356 5.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_679 4a4cb7bce969550c70a303b2ffb720aa 454 SUPERFAMILY SSF52540 108 378 8.34E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_679 4a4cb7bce969550c70a303b2ffb720aa 454 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_1298 fe45d87e3326e6a34b5e39cc669c190c 142 Pfam PF04143 Sulphur transport 48 130 9.1E-7 T 14-10-2018 IPR007272 Sulphur transport domain BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 SUPERFAMILY SSF53187 180 496 7.22E-125 T 14-10-2018 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 1.5E-122 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 SUPERFAMILY SSF52949 1 184 1.82E-51 T 14-10-2018 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.275 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 Gene3D G3DSA:3.40.220.10 1 159 7.3E-59 T 14-10-2018 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 8.0E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 8.0E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 8.0E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 8.0E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 8.0E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 Gene3D G3DSA:3.40.630.10 181 498 1.1E-141 T 14-10-2018 BD65_2392 5a59fd9070a1c3ea308c29be6959ce57 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 6.5E-34 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BD65_940 0240c5c7954816de96829662e7a2849f 120 Pfam PF14282 FlxA-like protein 16 112 3.4E-20 T 14-10-2018 IPR025577 FlxA-like protein BD65_1148 204cd994eaf31ec0cdf42c8082fb7e10 71 Gene3D G3DSA:1.20.1600.10 1 63 3.5E-9 T 14-10-2018 BD65_1148 204cd994eaf31ec0cdf42c8082fb7e10 71 SUPERFAMILY SSF56954 2 62 1.05E-7 T 14-10-2018 BD65_2346 808cc50ad29b30874adac4625dda9894 209 SUPERFAMILY SSF53335 31 207 1.82E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2346 808cc50ad29b30874adac4625dda9894 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 1.9E-94 T 14-10-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 BD65_2346 808cc50ad29b30874adac4625dda9894 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 4.3E-57 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BD65_2346 808cc50ad29b30874adac4625dda9894 209 PIRSF PIRSF005461 1 209 2.8E-81 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 BD65_2346 808cc50ad29b30874adac4625dda9894 209 Gene3D G3DSA:3.40.50.150 30 208 1.4E-60 T 14-10-2018 BD65_2346 808cc50ad29b30874adac4625dda9894 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.589 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 BD65_2016 6197d6849ba110dc080dca27f923de89 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.263 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2016 6197d6849ba110dc080dca27f923de89 46 Pfam PF00468 Ribosomal protein L34 1 44 1.4E-22 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2016 6197d6849ba110dc080dca27f923de89 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 6.0E-14 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2016 6197d6849ba110dc080dca27f923de89 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.7E-25 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2016 6197d6849ba110dc080dca27f923de89 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1327 a314c600a9714afd628871ab9bdf2ac7 109 Pfam PF16456 YmgD protein 26 107 1.3E-44 T 14-10-2018 IPR032497 Uncharacterised protein YmgD BD65_1327 a314c600a9714afd628871ab9bdf2ac7 109 Gene3D G3DSA:1.10.890.30 20 109 1.9E-48 T 14-10-2018 IPR038304 YmgD domain superfamily BD65_1657 449471970bab0f9978fb54471a0b23d2 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BD65_1657 449471970bab0f9978fb54471a0b23d2 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BD65_1657 449471970bab0f9978fb54471a0b23d2 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 2.3E-38 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BD65_1657 449471970bab0f9978fb54471a0b23d2 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 2.3E-38 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BD65_1657 449471970bab0f9978fb54471a0b23d2 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 2.3E-38 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BD65_1657 449471970bab0f9978fb54471a0b23d2 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 2.3E-38 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BD65_1657 449471970bab0f9978fb54471a0b23d2 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.9E-20 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BD65_1657 449471970bab0f9978fb54471a0b23d2 127 Gene3D G3DSA:1.20.5.1030 66 123 4.9E-16 T 14-10-2018 IPR038379 SecE superfamily BD65_1657 449471970bab0f9978fb54471a0b23d2 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BD65_1011 1d594e238b3dfdb0f117710c46915cb8 430 Gene3D G3DSA:2.40.50.100 88 232 1.4E-68 T 14-10-2018 BD65_1011 1d594e238b3dfdb0f117710c46915cb8 430 SUPERFAMILY SSF111369 81 320 3.01E-56 T 14-10-2018 BD65_1011 1d594e238b3dfdb0f117710c46915cb8 430 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 4 417 52.38 T 14-10-2018 IPR022824 Multidrug resistance protein MdtA BD65_1011 1d594e238b3dfdb0f117710c46915cb8 430 Pfam PF13437 HlyD family secretion protein 200 305 2.2E-5 T 14-10-2018 BD65_1011 1d594e238b3dfdb0f117710c46915cb8 430 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 396 4.9E-76 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BD65_1011 1d594e238b3dfdb0f117710c46915cb8 430 Gene3D G3DSA:2.40.30.170 82 305 1.4E-68 T 14-10-2018 BD65_1011 1d594e238b3dfdb0f117710c46915cb8 430 Gene3D G3DSA:2.40.420.20 306 398 2.8E-21 T 14-10-2018 BD65_1011 1d594e238b3dfdb0f117710c46915cb8 430 Pfam PF13533 Biotin-lipoyl like 89 137 5.7E-16 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BD65_1011 1d594e238b3dfdb0f117710c46915cb8 430 Gene3D G3DSA:1.10.287.470 123 196 1.4E-68 T 14-10-2018 BD65_1948 bea1b34b9cbecc87d43f5fed96b247a7 195 Gene3D G3DSA:1.10.150.240 16 81 6.2E-63 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BD65_1948 bea1b34b9cbecc87d43f5fed96b247a7 195 SUPERFAMILY SSF56784 3 188 6.01E-42 T 14-10-2018 IPR036412 HAD-like superfamily BD65_1948 bea1b34b9cbecc87d43f5fed96b247a7 195 Gene3D G3DSA:3.40.50.1000 4 182 6.2E-63 T 14-10-2018 IPR023214 HAD superfamily BD65_1948 bea1b34b9cbecc87d43f5fed96b247a7 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 3.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_1948 bea1b34b9cbecc87d43f5fed96b247a7 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 3.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_1948 bea1b34b9cbecc87d43f5fed96b247a7 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 3.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_1948 bea1b34b9cbecc87d43f5fed96b247a7 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 3.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_1948 bea1b34b9cbecc87d43f5fed96b247a7 195 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 55 184 9.9E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_1948 bea1b34b9cbecc87d43f5fed96b247a7 195 Pfam PF13419 Haloacid dehalogenase-like hydrolase 83 184 3.0E-10 T 14-10-2018 BD65_1139 67c35932f85092517bd6ede5fc5b4b0e 134 SUPERFAMILY SSF52218 1 132 6.28E-21 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_1139 67c35932f85092517bd6ede5fc5b4b0e 134 PIRSF PIRSF005087 1 134 1.0E-54 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BD65_1139 67c35932f85092517bd6ede5fc5b4b0e 134 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 2.8E-54 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BD65_1139 67c35932f85092517bd6ede5fc5b4b0e 134 Gene3D G3DSA:3.40.50.360 3 134 1.0E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_1139 67c35932f85092517bd6ede5fc5b4b0e 134 Hamap MF_00128 Protein NrdI [nrdI]. 3 133 35.586 T 14-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial BD65_1139 67c35932f85092517bd6ede5fc5b4b0e 134 Pfam PF07972 NrdI Flavodoxin like 5 123 7.5E-48 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BD65_1854 3058a63a3b913330d09780c1815914ef 329 Pfam PF13531 Bacterial extracellular solute-binding protein 40 280 2.8E-43 T 14-10-2018 BD65_1854 3058a63a3b913330d09780c1815914ef 329 SUPERFAMILY SSF53850 21 326 7.11E-89 T 14-10-2018 BD65_1854 3058a63a3b913330d09780c1815914ef 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 BD65_1854 3058a63a3b913330d09780c1815914ef 329 Gene3D G3DSA:3.40.190.10 27 295 6.2E-138 T 14-10-2018 BD65_1854 3058a63a3b913330d09780c1815914ef 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 3.9E-176 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 BD65_1854 3058a63a3b913330d09780c1815914ef 329 Gene3D G3DSA:3.40.190.10 114 325 6.2E-138 T 14-10-2018 BD65_1133 ed55c23145873a02e6b02693c9336125 70 SMART SM00357 6 70 1.5E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_1133 ed55c23145873a02e6b02693c9336125 70 PRINTS PR00050 Cold shock protein signature 43 61 6.3E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_1133 ed55c23145873a02e6b02693c9336125 70 PRINTS PR00050 Cold shock protein signature 7 22 6.3E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_1133 ed55c23145873a02e6b02693c9336125 70 PRINTS PR00050 Cold shock protein signature 28 37 6.3E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_1133 ed55c23145873a02e6b02693c9336125 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site BD65_1133 ed55c23145873a02e6b02693c9336125 70 SUPERFAMILY SSF50249 2 69 1.71E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_1133 ed55c23145873a02e6b02693c9336125 70 Gene3D G3DSA:2.40.50.140 2 69 3.1E-29 T 14-10-2018 BD65_1133 ed55c23145873a02e6b02693c9336125 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.3E-32 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_1133 ed55c23145873a02e6b02693c9336125 70 PIRSF PIRSF002599 1 70 1.9E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BD65_1017 0bc1882b8be8844711b82dc79c4fd4a3 112 SUPERFAMILY SSF160113 63 110 2.49E-15 T 14-10-2018 IPR036913 YegP-like superfamily BD65_1017 0bc1882b8be8844711b82dc79c4fd4a3 112 SUPERFAMILY SSF160113 4 58 4.06E-19 T 14-10-2018 IPR036913 YegP-like superfamily BD65_1017 0bc1882b8be8844711b82dc79c4fd4a3 112 Pfam PF07411 Domain of unknown function (DUF1508) 64 109 7.3E-20 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 BD65_1017 0bc1882b8be8844711b82dc79c4fd4a3 112 Pfam PF07411 Domain of unknown function (DUF1508) 11 58 1.4E-23 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 BD65_1017 0bc1882b8be8844711b82dc79c4fd4a3 112 Gene3D G3DSA:2.30.29.80 2 112 9.4E-46 T 14-10-2018 BD65_3220 42eab0fd5eaaacd0a93fd3fd90f9143e 649 Pfam PF00005 ABC transporter 24 172 2.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3220 42eab0fd5eaaacd0a93fd3fd90f9143e 649 Pfam PF02687 FtsX-like permease family 554 642 5.6E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BD65_3220 42eab0fd5eaaacd0a93fd3fd90f9143e 649 SUPERFAMILY SSF52540 4 225 5.84E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3220 42eab0fd5eaaacd0a93fd3fd90f9143e 649 Gene3D G3DSA:3.40.50.300 1 273 3.5E-70 T 14-10-2018 BD65_3220 42eab0fd5eaaacd0a93fd3fd90f9143e 649 SMART SM00382 33 220 6.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3220 42eab0fd5eaaacd0a93fd3fd90f9143e 649 Pfam PF12704 MacB-like periplasmic core domain 273 491 2.1E-38 T 14-10-2018 IPR025857 MacB-like periplasmic core domain BD65_3220 42eab0fd5eaaacd0a93fd3fd90f9143e 649 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 3.0E-73 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 3.0E-73 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 3.0E-73 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 3.0E-73 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 3.0E-73 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 3.0E-73 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 PIRSF PIRSF500210 1 331 4.4E-126 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 Gene3D G3DSA:3.30.540.10 1 195 2.0E-74 T 14-10-2018 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 PIRSF PIRSF000904 1 331 6.4E-123 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 Gene3D G3DSA:3.40.190.80 197 333 1.8E-58 T 14-10-2018 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 2.5E-79 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 SUPERFAMILY SSF56655 2 327 1.69E-111 T 14-10-2018 BD65_2329 c8f2ccc5dbd1db365313d68eab9a730b 333 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 42.258 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BD65_2506 b972d28c40e8f3c22803b67e50a69907 312 PIRSF PIRSF004491 1 310 1.5E-102 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BD65_2506 b972d28c40e8f3c22803b67e50a69907 312 Gene3D G3DSA:2.40.30.30 188 310 7.5E-39 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BD65_2506 b972d28c40e8f3c22803b67e50a69907 312 SMART SM00904 183 307 2.3E-63 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BD65_2506 b972d28c40e8f3c22803b67e50a69907 312 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 49 2.7E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BD65_2506 b972d28c40e8f3c22803b67e50a69907 312 Pfam PF01687 Riboflavin kinase 184 306 2.8E-38 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BD65_2506 b972d28c40e8f3c22803b67e50a69907 312 SUPERFAMILY SSF52374 15 175 2.22E-35 T 14-10-2018 BD65_2506 b972d28c40e8f3c22803b67e50a69907 312 Pfam PF06574 FAD synthetase 12 167 3.0E-55 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BD65_2506 b972d28c40e8f3c22803b67e50a69907 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 1.4E-113 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BD65_2506 b972d28c40e8f3c22803b67e50a69907 312 Gene3D G3DSA:3.40.50.620 1 186 1.5E-58 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2506 b972d28c40e8f3c22803b67e50a69907 312 SUPERFAMILY SSF82114 174 307 3.49E-44 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BD65_472 4c2a11acaac9808372bc6a0866fe4ca1 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 450 4.1E-152 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 BD65_472 4c2a11acaac9808372bc6a0866fe4ca1 480 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 466 44.357 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 BD65_3161 8f9cacdcb493582260bc9408000d5992 617 Pfam PF05170 AsmA family 3 179 6.8E-18 T 14-10-2018 IPR007844 AsmA BD65_3161 8f9cacdcb493582260bc9408000d5992 617 Pfam PF05170 AsmA family 248 511 7.0E-21 T 14-10-2018 IPR007844 AsmA BD65_2607 98768a5d364b8c9c559247ab16d24300 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 5.9E-201 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BD65_2607 98768a5d364b8c9c559247ab16d24300 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 106.609 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BD65_2607 98768a5d364b8c9c559247ab16d24300 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_2607 98768a5d364b8c9c559247ab16d24300 426 Pfam PF00202 Aminotransferase class-III 32 396 2.9E-78 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BD65_2607 98768a5d364b8c9c559247ab16d24300 426 SUPERFAMILY SSF53383 2 425 1.71E-135 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_2607 98768a5d364b8c9c559247ab16d24300 426 Gene3D G3DSA:3.90.1150.10 7 419 8.9E-180 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_2607 98768a5d364b8c9c559247ab16d24300 426 Gene3D G3DSA:3.40.640.10 69 317 8.9E-180 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_2930 3a0520c9e44931de468f690ed2059061 479 Gene3D G3DSA:3.40.50.12780 3 364 4.9E-64 T 14-10-2018 BD65_2930 3a0520c9e44931de468f690ed2059061 479 SUPERFAMILY SSF56801 3 474 8.9E-82 T 14-10-2018 BD65_2930 3a0520c9e44931de468f690ed2059061 479 ProSitePatterns PS00455 Putative AMP-binding domain signature. 135 146 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_2930 3a0520c9e44931de468f690ed2059061 479 Pfam PF00501 AMP-binding enzyme 9 368 1.6E-49 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_2380 4c3ef7ff8d534da342912fdcfb2d6084 290 PIRSF PIRSF011468 1 287 1.1E-163 T 14-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_2380 4c3ef7ff8d534da342912fdcfb2d6084 290 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 277 5.5E-145 T 14-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_1712 20042220a3bcee8892dc70d9bb0fd6c6 428 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 2.5E-57 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BD65_1712 20042220a3bcee8892dc70d9bb0fd6c6 428 Pfam PF11862 Domain of unknown function (DUF3382) 6 103 1.6E-25 T 14-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal BD65_2767 294bd50048a4126fa45e91b7ad528cc4 352 Pfam PF11799 impB/mucB/samB family C-terminal domain 235 346 5.6E-9 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BD65_2767 294bd50048a4126fa45e91b7ad528cc4 352 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 36.801 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BD65_2767 294bd50048a4126fa45e91b7ad528cc4 352 Pfam PF11798 IMS family HHH motif 169 197 1.4E-8 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BD65_2767 294bd50048a4126fa45e91b7ad528cc4 352 SUPERFAMILY SSF100879 241 350 3.53E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BD65_2767 294bd50048a4126fa45e91b7ad528cc4 352 Pfam PF00817 impB/mucB/samB family 7 154 2.4E-49 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BD65_2767 294bd50048a4126fa45e91b7ad528cc4 352 SUPERFAMILY SSF56672 1 234 3.11E-92 T 14-10-2018 BD65_2767 294bd50048a4126fa45e91b7ad528cc4 352 Gene3D G3DSA:1.10.150.20 166 228 1.5E-18 T 14-10-2018 BD65_2767 294bd50048a4126fa45e91b7ad528cc4 352 Gene3D G3DSA:3.30.70.270 4 164 2.5E-64 T 14-10-2018 BD65_2767 294bd50048a4126fa45e91b7ad528cc4 352 Gene3D G3DSA:3.30.1490.100 237 351 1.5E-28 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BD65_2767 294bd50048a4126fa45e91b7ad528cc4 352 Gene3D G3DSA:2.30.40.20 21 73 2.5E-64 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 66.606 T 14-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 Gene3D G3DSA:3.50.50.60 158 276 9.5E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 SUPERFAMILY SSF55424 344 463 2.41E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.8E-28 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 4.8E-28 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 4.8E-28 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 4.8E-28 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 4.8E-28 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.3E-52 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.3E-52 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.3E-52 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.3E-52 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.3E-52 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.3E-52 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.3E-52 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.3E-52 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.3E-52 T 14-10-2018 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 PIRSF PIRSF000350 1 463 1.1E-71 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 2.0E-59 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 Gene3D G3DSA:3.30.390.30 345 464 6.1E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 SUPERFAMILY SSF51905 1 322 3.46E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 Gene3D G3DSA:3.50.50.60 7 332 9.5E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1811 3296cf5472e8fad52a8671e0ea0c4529 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 6.2E-30 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BD65_631 34c09153c29e8319aea7b454947a8422 636 SUPERFAMILY SSF51905 76 631 3.95E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_631 34c09153c29e8319aea7b454947a8422 636 Gene3D G3DSA:3.50.50.60 74 157 2.4E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_631 34c09153c29e8319aea7b454947a8422 636 Pfam PF13450 NAD(P)-binding Rossmann-like domain 82 142 2.5E-12 T 14-10-2018 BD65_208 263b6b353d38717b83c529b731569936 148 PIRSF PIRSF006173 1 145 2.0E-65 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 BD65_208 263b6b353d38717b83c529b731569936 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 4.8E-7 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein BD65_208 263b6b353d38717b83c529b731569936 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 41.156 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 BD65_461 136c0ec8ae97e1d1f32ad5d521853878 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 3.9E-44 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 BD65_461 136c0ec8ae97e1d1f32ad5d521853878 138 SUPERFAMILY SSF54637 6 133 4.23E-29 T 14-10-2018 IPR029069 HotDog domain superfamily BD65_461 136c0ec8ae97e1d1f32ad5d521853878 138 Pfam PF03061 Thioesterase superfamily 50 127 4.4E-15 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BD65_461 136c0ec8ae97e1d1f32ad5d521853878 138 Gene3D G3DSA:3.10.129.10 1 138 7.9E-58 T 14-10-2018 BD65_2964 788d96bcefd06993c55fc52f77b5c9c2 358 SUPERFAMILY SSF110997 284 354 2.88E-14 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BD65_2964 788d96bcefd06993c55fc52f77b5c9c2 358 Pfam PF03330 Lytic transglycolase 78 164 5.3E-24 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain BD65_2964 788d96bcefd06993c55fc52f77b5c9c2 358 SUPERFAMILY SSF50685 83 164 1.88E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily BD65_2964 788d96bcefd06993c55fc52f77b5c9c2 358 Gene3D G3DSA:3.30.70.1070 285 357 1.7E-11 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BD65_2964 788d96bcefd06993c55fc52f77b5c9c2 358 Gene3D G3DSA:2.40.40.10 76 167 3.5E-32 T 14-10-2018 IPR036908 RlpA-like domain superfamily BD65_2964 788d96bcefd06993c55fc52f77b5c9c2 358 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 78 177 2.9E-35 T 14-10-2018 IPR012997 Rare lipoprotein A BD65_2964 788d96bcefd06993c55fc52f77b5c9c2 358 Pfam PF05036 Sporulation related domain 283 355 1.9E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 BD65_2964 788d96bcefd06993c55fc52f77b5c9c2 358 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 16 166 22.728 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 BD65_357 cede68d7d832e870f5a234ebe19c0748 775 Gene3D G3DSA:1.10.3680.10 514 643 5.2E-9 T 14-10-2018 IPR029024 TerB-like BD65_357 cede68d7d832e870f5a234ebe19c0748 775 Pfam PF05099 Tellurite resistance protein TerB 523 633 6.8E-7 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal BD65_357 cede68d7d832e870f5a234ebe19c0748 775 Pfam PF15615 TerB-C domain 646 773 1.4E-14 T 14-10-2018 IPR028932 TerB-C domain BD65_357 cede68d7d832e870f5a234ebe19c0748 775 SUPERFAMILY SSF158682 514 642 2.62E-20 T 14-10-2018 IPR029024 TerB-like BD65_357 cede68d7d832e870f5a234ebe19c0748 775 Pfam PF13208 TerB N-terminal domain 119 324 3.7E-50 T 14-10-2018 IPR025266 TerB, N-terminal BD65_2721 ea31616bdb5de39c5f186e9244639a2e 429 Gene3D G3DSA:3.10.580.10 201 330 4.3E-43 T 14-10-2018 BD65_2721 ea31616bdb5de39c5f186e9244639a2e 429 Gene3D G3DSA:3.30.465.10 340 418 1.4E-25 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BD65_2721 ea31616bdb5de39c5f186e9244639a2e 429 SUPERFAMILY SSF56176 340 423 2.07E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BD65_2721 ea31616bdb5de39c5f186e9244639a2e 429 SUPERFAMILY SSF54631 192 329 1.01E-22 T 14-10-2018 BD65_2721 ea31616bdb5de39c5f186e9244639a2e 429 SMART SM01091 342 419 2.5E-24 T 14-10-2018 IPR005170 Transporter-associated domain BD65_2721 ea31616bdb5de39c5f186e9244639a2e 429 Pfam PF01595 Domain of unknown function DUF21 11 184 5.0E-51 T 14-10-2018 IPR002550 CNNM, transmembrane domain BD65_2721 ea31616bdb5de39c5f186e9244639a2e 429 Pfam PF03471 Transporter associated domain 344 418 2.9E-18 T 14-10-2018 IPR005170 Transporter-associated domain BD65_1681 df905298374d744bfec42746ab5ea091 162 SMART SM00738 1 100 8.7E-20 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BD65_1681 df905298374d744bfec42746ab5ea091 162 Pfam PF02357 Transcription termination factor nusG 3 96 1.5E-17 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BD65_1681 df905298374d744bfec42746ab5ea091 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 6.7E-53 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 BD65_1681 df905298374d744bfec42746ab5ea091 162 Gene3D G3DSA:3.30.70.940 1 162 4.5E-52 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BD65_1681 df905298374d744bfec42746ab5ea091 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 43.244 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 BD65_1681 df905298374d744bfec42746ab5ea091 162 SUPERFAMILY SSF82679 2 98 1.09E-24 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BD65_424 c3d3fab0c483c2c5a14244489f963133 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 3.6E-130 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BD65_424 c3d3fab0c483c2c5a14244489f963133 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 54.283 T 14-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 BD65_424 c3d3fab0c483c2c5a14244489f963133 286 Pfam PF08543 Phosphomethylpyrimidine kinase 75 263 1.5E-15 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BD65_424 c3d3fab0c483c2c5a14244489f963133 286 Gene3D G3DSA:3.40.1190.20 1 286 1.4E-90 T 14-10-2018 IPR029056 Ribokinase-like BD65_424 c3d3fab0c483c2c5a14244489f963133 286 SUPERFAMILY SSF53613 1 278 1.56E-75 T 14-10-2018 IPR029056 Ribokinase-like BD65_2702 291bfcb207ea42c6217eb4f7dc7c74d1 169 Pfam PF01292 Prokaryotic cytochrome b561 5 167 1.1E-19 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BD65_2702 291bfcb207ea42c6217eb4f7dc7c74d1 169 SUPERFAMILY SSF81342 3 167 1.49E-21 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BD65_2702 291bfcb207ea42c6217eb4f7dc7c74d1 169 Gene3D G3DSA:1.20.950.20 1 83 3.1E-7 T 14-10-2018 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 Pfam PF00742 Homoserine dehydrogenase 614 810 2.8E-49 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 SUPERFAMILY SSF55347 614 797 9.15E-53 T 14-10-2018 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 SUPERFAMILY SSF55021 383 475 9.16E-22 T 14-10-2018 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 SUPERFAMILY SSF51735 464 636 1.58E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 Gene3D G3DSA:3.30.2130.10 302 464 9.6E-48 T 14-10-2018 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 Gene3D G3DSA:3.40.50.720 466 811 3.8E-121 T 14-10-2018 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 SUPERFAMILY SSF53633 1 296 9.43E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 7.0E-29 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 Gene3D G3DSA:3.40.1160.10 1 297 6.8E-86 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 Pfam PF01842 ACT domain 324 374 7.4E-8 T 14-10-2018 IPR002912 ACT domain BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 PIRSF PIRSF000727 1 817 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 Pfam PF13840 ACT domain 395 453 7.3E-8 T 14-10-2018 IPR027795 CASTOR, ACT domain BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 SUPERFAMILY SSF55021 304 381 1.18E-22 T 14-10-2018 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 4.8E-143 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 Pfam PF00696 Amino acid kinase family 2 284 5.3E-47 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BD65_2492 0d1eef9bbf5fabc1b394be1dd1e28def 819 Gene3D G3DSA:3.30.360.10 625 795 3.8E-121 T 14-10-2018 BD65_2097 628d8a69dca289d927e72525f1090100 413 SUPERFAMILY SSF118215 13 393 8.76E-77 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BD65_2097 628d8a69dca289d927e72525f1090100 413 Pfam PF00375 Sodium:dicarboxylate symporter family 14 392 3.1E-78 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BD65_2097 628d8a69dca289d927e72525f1090100 413 Gene3D G3DSA:1.10.3860.10 1 399 1.4E-77 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BD65_2097 628d8a69dca289d927e72525f1090100 413 PRINTS PR00173 Glutamate-aspartate symporter signature 347 367 3.2E-9 T 14-10-2018 BD65_2097 628d8a69dca289d927e72525f1090100 413 PRINTS PR00173 Glutamate-aspartate symporter signature 183 202 3.2E-9 T 14-10-2018 BD65_2097 628d8a69dca289d927e72525f1090100 413 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 3.2E-9 T 14-10-2018 BD65_2097 628d8a69dca289d927e72525f1090100 413 PRINTS PR00173 Glutamate-aspartate symporter signature 285 311 3.2E-9 T 14-10-2018 BD65_1016 28b188d384bdc74c5749f4d9e170b760 239 SMART SM00448 12 122 2.0E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1016 28b188d384bdc74c5749f4d9e170b760 239 Pfam PF00072 Response regulator receiver domain 14 122 1.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1016 28b188d384bdc74c5749f4d9e170b760 239 Gene3D G3DSA:3.40.50.2300 7 134 1.2E-33 T 14-10-2018 BD65_1016 28b188d384bdc74c5749f4d9e170b760 239 SMART SM00862 155 231 6.9E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_1016 28b188d384bdc74c5749f4d9e170b760 239 Gene3D G3DSA:1.10.10.10 141 238 9.6E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1016 28b188d384bdc74c5749f4d9e170b760 239 SUPERFAMILY SSF52172 14 189 1.17E-38 T 14-10-2018 IPR011006 CheY-like superfamily BD65_1016 28b188d384bdc74c5749f4d9e170b760 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 5.7E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_2263 f085d7e7da416f0a36b994b08195202a 97 SMART SM00883 2 95 1.5E-48 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BD65_2263 f085d7e7da416f0a36b994b08195202a 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 2.1E-29 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BD65_2263 f085d7e7da416f0a36b994b08195202a 97 PRINTS PR00297 10kDa chaperonin signature 60 72 2.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BD65_2263 f085d7e7da416f0a36b994b08195202a 97 PRINTS PR00297 10kDa chaperonin signature 3 18 2.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BD65_2263 f085d7e7da416f0a36b994b08195202a 97 PRINTS PR00297 10kDa chaperonin signature 25 46 2.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BD65_2263 f085d7e7da416f0a36b994b08195202a 97 PRINTS PR00297 10kDa chaperonin signature 82 95 2.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BD65_2263 f085d7e7da416f0a36b994b08195202a 97 Gene3D G3DSA:2.30.33.40 1 97 8.9E-37 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 BD65_2263 f085d7e7da416f0a36b994b08195202a 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.884 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BD65_2263 f085d7e7da416f0a36b994b08195202a 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 BD65_2263 f085d7e7da416f0a36b994b08195202a 97 SUPERFAMILY SSF50129 1 96 7.89E-31 T 14-10-2018 IPR011032 GroES-like superfamily BD65_1985 d13be5c51f01e1031f18ba7e22a4e271 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 1.0E-38 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BD65_1985 d13be5c51f01e1031f18ba7e22a4e271 156 SUPERFAMILY SSF81573 63 121 4.58E-15 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BD65_1985 d13be5c51f01e1031f18ba7e22a4e271 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.2E-59 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 BD65_1985 d13be5c51f01e1031f18ba7e22a4e271 156 Gene3D G3DSA:1.20.5.620 62 122 1.6E-24 T 14-10-2018 BD65_1985 d13be5c51f01e1031f18ba7e22a4e271 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.285 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BD65_3005 65419b4b2bcc9975535201d3b652895a 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 89 3.4E-8 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 BD65_651 b6def1049499d177b6b35a3387bdd748 251 SUPERFAMILY SSF51735 4 243 7.2E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_651 b6def1049499d177b6b35a3387bdd748 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_651 b6def1049499d177b6b35a3387bdd748 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_651 b6def1049499d177b6b35a3387bdd748 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_651 b6def1049499d177b6b35a3387bdd748 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.2E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_651 b6def1049499d177b6b35a3387bdd748 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.2E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_651 b6def1049499d177b6b35a3387bdd748 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.2E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_651 b6def1049499d177b6b35a3387bdd748 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.2E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_651 b6def1049499d177b6b35a3387bdd748 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.2E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_651 b6def1049499d177b6b35a3387bdd748 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.2E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_651 b6def1049499d177b6b35a3387bdd748 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BD65_651 b6def1049499d177b6b35a3387bdd748 251 Gene3D G3DSA:3.40.50.720 1 248 5.1E-82 T 14-10-2018 BD65_651 b6def1049499d177b6b35a3387bdd748 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 242 1.2E-70 T 14-10-2018 BD65_1485 1583c92d4d9dfd2d4be77a9e0d8c7c75 240 SUPERFAMILY SSF53955 52 231 1.35E-61 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_1485 1583c92d4d9dfd2d4be77a9e0d8c7c75 240 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 14 232 39.19 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_1485 1583c92d4d9dfd2d4be77a9e0d8c7c75 240 Gene3D G3DSA:1.10.3810.10 53 239 1.8E-54 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_1485 1583c92d4d9dfd2d4be77a9e0d8c7c75 240 Pfam PF00912 Transglycosylase 58 226 1.9E-51 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_1485 1583c92d4d9dfd2d4be77a9e0d8c7c75 240 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 14 230 9.1E-84 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2448 98bc40224d08e659d54d2ba773c07cf6 493 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 67 405 7.3E-84 T 14-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 BD65_2448 98bc40224d08e659d54d2ba773c07cf6 493 PIRSF PIRSF014753 42 447 8.3E-89 T 14-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 BD65_2448 98bc40224d08e659d54d2ba773c07cf6 493 PIRSF PIRSF014753 411 493 170.0 T 14-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 BD65_1504 39b01c278d290cfc4573d982d55052a0 100 Pfam PF13466 STAS domain 16 91 6.7E-16 T 14-10-2018 IPR002645 STAS domain BD65_1504 39b01c278d290cfc4573d982d55052a0 100 SUPERFAMILY SSF52091 2 96 1.26E-16 T 14-10-2018 IPR036513 STAS domain superfamily BD65_1504 39b01c278d290cfc4573d982d55052a0 100 Gene3D G3DSA:3.30.750.24 2 100 1.8E-12 T 14-10-2018 IPR036513 STAS domain superfamily BD65_656 8a58639cf6b59db7b73fc9d7286a22e3 515 Gene3D G3DSA:3.40.50.11830 194 353 7.4E-77 T 14-10-2018 BD65_656 8a58639cf6b59db7b73fc9d7286a22e3 515 Gene3D G3DSA:1.10.10.10 4 109 3.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_656 8a58639cf6b59db7b73fc9d7286a22e3 515 SMART SM00862 24 100 2.1E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_656 8a58639cf6b59db7b73fc9d7286a22e3 515 SUPERFAMILY SSF46894 2 102 1.98E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_656 8a58639cf6b59db7b73fc9d7286a22e3 515 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 100 5.8E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_656 8a58639cf6b59db7b73fc9d7286a22e3 515 Gene3D G3DSA:1.25.40.10 354 514 4.9E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 3.2E-38 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 Gene3D G3DSA:1.10.1060.10 13 146 4.7E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 Gene3D G3DSA:3.50.50.60 147 199 3.0E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1490 10d385732a965061c3d557e10e4e66ba 472 Gene3D G3DSA:3.50.50.60 245 400 4.9E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1490 10d385732a965061c3d557e10e4e66ba 472 SUPERFAMILY SSF46548 7 157 9.94E-42 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 3.6E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 1.5E-260 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 3.7E-37 T 14-10-2018 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.7E-37 T 14-10-2018 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.7E-37 T 14-10-2018 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 3.7E-37 T 14-10-2018 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.7E-37 T 14-10-2018 BD65_1490 10d385732a965061c3d557e10e4e66ba 472 SUPERFAMILY SSF51971 145 401 1.47E-67 T 14-10-2018 BD65_2225 5d074737357872eb4878a7a728009ee7 167 SUPERFAMILY SSF54768 9 75 3.87E-23 T 14-10-2018 BD65_2225 5d074737357872eb4878a7a728009ee7 167 Gene3D G3DSA:3.30.230.10 74 167 9.8E-38 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_2225 5d074737357872eb4878a7a728009ee7 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.8E-28 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 BD65_2225 5d074737357872eb4878a7a728009ee7 167 Gene3D G3DSA:3.30.160.20 1 73 2.3E-33 T 14-10-2018 BD65_2225 5d074737357872eb4878a7a728009ee7 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.416 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BD65_2225 5d074737357872eb4878a7a728009ee7 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site BD65_2225 5d074737357872eb4878a7a728009ee7 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.0E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 BD65_2225 5d074737357872eb4878a7a728009ee7 167 SUPERFAMILY SSF54211 79 159 7.59E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_2225 5d074737357872eb4878a7a728009ee7 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 9.7E-70 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BD65_1467 249b21b64933438776adff2c00c1eda4 469 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 49.165 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 BD65_1467 249b21b64933438776adff2c00c1eda4 469 SUPERFAMILY SSF51556 3 465 1.6E-178 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_1467 249b21b64933438776adff2c00c1eda4 469 Gene3D G3DSA:1.10.2020.10 46 137 9.4E-201 T 14-10-2018 BD65_1467 249b21b64933438776adff2c00c1eda4 469 Pfam PF02614 Glucuronate isomerase 1 465 8.3E-226 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 BD65_1467 249b21b64933438776adff2c00c1eda4 469 Gene3D G3DSA:3.20.20.140 7 465 9.4E-201 T 14-10-2018 BD65_2306 de2eb680e79e5356c3b7c256118b54e3 237 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 144 1.6E-17 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BD65_2306 de2eb680e79e5356c3b7c256118b54e3 237 Gene3D G3DSA:2.60.40.10 34 144 1.5E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2306 de2eb680e79e5356c3b7c256118b54e3 237 PRINTS PR00969 Pili chaperone signature 126 141 2.5E-5 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2306 de2eb680e79e5356c3b7c256118b54e3 237 PRINTS PR00969 Pili chaperone signature 76 97 2.5E-5 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2306 de2eb680e79e5356c3b7c256118b54e3 237 PRINTS PR00969 Pili chaperone signature 105 122 2.5E-5 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2306 de2eb680e79e5356c3b7c256118b54e3 237 PRINTS PR00969 Pili chaperone signature 161 176 2.5E-5 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2306 de2eb680e79e5356c3b7c256118b54e3 237 SUPERFAMILY SSF49354 29 144 2.33E-18 T 14-10-2018 IPR008962 PapD-like superfamily BD65_2947 93fe92908a52f0328d556f5565a45160 727 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 46 123 2.0E-9 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BD65_2947 93fe92908a52f0328d556f5565a45160 727 Gene3D G3DSA:2.60.120.260 11 183 3.6E-30 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BD65_2947 93fe92908a52f0328d556f5565a45160 727 SUPERFAMILY SSF49303 190 304 2.88E-19 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BD65_2947 93fe92908a52f0328d556f5565a45160 727 SUPERFAMILY SSF51445 302 624 8.45E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_2947 93fe92908a52f0328d556f5565a45160 727 SUPERFAMILY SSF49785 12 182 1.34E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BD65_2947 93fe92908a52f0328d556f5565a45160 727 Gene3D G3DSA:2.60.40.10 205 302 6.0E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2947 93fe92908a52f0328d556f5565a45160 727 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 311 510 6.9E-9 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BD65_2947 93fe92908a52f0328d556f5565a45160 727 Gene3D G3DSA:3.20.20.80 304 622 1.3E-64 T 14-10-2018 BD65_2947 93fe92908a52f0328d556f5565a45160 727 Pfam PF00703 Glycosyl hydrolases family 2 195 304 1.5E-9 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_2947 93fe92908a52f0328d556f5565a45160 727 PRINTS PR00132 Glycosyl hydrolase family 2 signature 346 364 6.2E-5 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_2947 93fe92908a52f0328d556f5565a45160 727 PRINTS PR00132 Glycosyl hydrolase family 2 signature 411 426 6.2E-5 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_2947 93fe92908a52f0328d556f5565a45160 727 PRINTS PR00132 Glycosyl hydrolase family 2 signature 92 107 6.2E-5 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BD65_494 3900421b7bba8c1069ad460262660cfa 65 Gene3D G3DSA:2.40.50.530 1 65 2.1E-19 T 14-10-2018 BD65_494 3900421b7bba8c1069ad460262660cfa 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_494 3900421b7bba8c1069ad460262660cfa 65 Pfam PF01632 Ribosomal protein L35 2 60 2.7E-23 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_494 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.2E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BD65_494 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.2E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BD65_494 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.2E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BD65_494 3900421b7bba8c1069ad460262660cfa 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.5E-26 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BD65_494 3900421b7bba8c1069ad460262660cfa 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.039 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BD65_494 3900421b7bba8c1069ad460262660cfa 65 SUPERFAMILY SSF143034 2 64 1.44E-22 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1872 12747a20331c70ec37ef4c63b134600a 155 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 3.5E-41 T 14-10-2018 IPR009678 Bacteriophage tail completion protein R BD65_2894 f082d926d78e17708839d5399bafd349 138 SMART SM00422 1 70 4.1E-27 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BD65_2894 f082d926d78e17708839d5399bafd349 138 Gene3D G3DSA:1.10.1660.10 1 125 3.7E-30 T 14-10-2018 BD65_2894 f082d926d78e17708839d5399bafd349 138 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.9E-56 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 BD65_2894 f082d926d78e17708839d5399bafd349 138 SUPERFAMILY SSF46955 1 126 1.61E-33 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BD65_2894 f082d926d78e17708839d5399bafd349 138 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.2E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BD65_2471 a3cf239e9f2cf7f2377e94745ebe4cae 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 2.7E-13 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BD65_2471 a3cf239e9f2cf7f2377e94745ebe4cae 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 19.247 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BD65_2471 a3cf239e9f2cf7f2377e94745ebe4cae 53 PIRSF PIRSF036466 1 53 9.9E-20 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BD65_1535 ff589fb8be6e76e0d59d5e7e903b31bf 165 SUPERFAMILY SSF53933 59 164 1.45E-38 T 14-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 BD65_1535 ff589fb8be6e76e0d59d5e7e903b31bf 165 PIRSF PIRSF001013 1 165 2.0E-62 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BD65_1535 ff589fb8be6e76e0d59d5e7e903b31bf 165 Gene3D G3DSA:3.10.450.30 50 165 1.2E-45 T 14-10-2018 BD65_1535 ff589fb8be6e76e0d59d5e7e903b31bf 165 Pfam PF00545 ribonuclease 75 163 9.4E-26 T 14-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 BD65_1535 ff589fb8be6e76e0d59d5e7e903b31bf 165 PRINTS PR00117 Barnase signature 62 79 4.9E-28 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BD65_1535 ff589fb8be6e76e0d59d5e7e903b31bf 165 PRINTS PR00117 Barnase signature 102 120 4.9E-28 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BD65_1535 ff589fb8be6e76e0d59d5e7e903b31bf 165 PRINTS PR00117 Barnase signature 123 142 4.9E-28 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BD65_1535 ff589fb8be6e76e0d59d5e7e903b31bf 165 PRINTS PR00117 Barnase signature 145 163 4.9E-28 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BD65_1535 ff589fb8be6e76e0d59d5e7e903b31bf 165 PRINTS PR00117 Barnase signature 82 99 4.9E-28 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BD65_2576 6d1ec16fb4a822989da554f0aadd3789 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 1.6E-158 T 14-10-2018 IPR031347 Protein AmpE BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 8.8E-45 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 Gene3D G3DSA:3.40.50.300 4 213 2.0E-60 T 14-10-2018 BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 PRINTS PR00988 Uridine kinase signature 8 25 3.1E-37 T 14-10-2018 BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 PRINTS PR00988 Uridine kinase signature 87 102 3.1E-37 T 14-10-2018 BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 PRINTS PR00988 Uridine kinase signature 157 168 3.1E-37 T 14-10-2018 BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 PRINTS PR00988 Uridine kinase signature 143 153 3.1E-37 T 14-10-2018 BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 PRINTS PR00988 Uridine kinase signature 42 53 3.1E-37 T 14-10-2018 BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 PRINTS PR00988 Uridine kinase signature 179 192 3.1E-37 T 14-10-2018 BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 TIGRFAM TIGR00235 udk: uridine kinase 6 213 7.2E-95 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 40.687 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BD65_3159 a2a22090f6b3dba990c2d75b76e79e1f 213 SUPERFAMILY SSF52540 8 205 9.98E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 SUPERFAMILY SSF50677 204 403 1.05E-53 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 1.4E-298 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 Gene3D G3DSA:1.10.730.20 640 931 1.0E-92 T 14-10-2018 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 4.9E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 2.0E-224 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.423 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 Gene3D G3DSA:3.40.50.620 25 629 1.0E-231 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 Gene3D G3DSA:3.90.740.10 195 408 1.0E-231 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 SUPERFAMILY SSF47323 652 930 3.55E-78 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 1.2E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 1.2E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.2E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.2E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 1.2E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 SUPERFAMILY SSF52374 3 647 5.91E-136 T 14-10-2018 BD65_2507 895ecf1c20671ee83b1f4523aa9c5cd1 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 841 2.5E-30 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BD65_823 0771f9eebc2ee9ca22de9ccd174eb3fb 500 Pfam PF14264 Glucosyl transferase GtrII 27 332 2.7E-26 T 14-10-2018 IPR025686 Glucosyl transferase II BD65_790 95f4d521e8ed45254939c7d60f9e1e76 397 SUPERFAMILY SSF103473 7 394 2.49E-68 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_790 95f4d521e8ed45254939c7d60f9e1e76 397 Pfam PF07690 Major Facilitator Superfamily 16 358 1.0E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_790 95f4d521e8ed45254939c7d60f9e1e76 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 390 7.6E-136 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BD65_790 95f4d521e8ed45254939c7d60f9e1e76 397 Gene3D G3DSA:1.20.1720.10 11 389 1.7E-102 T 14-10-2018 BD65_113 6c323fee77b3aa7fa677717a4c298855 262 Pfam PF02562 PhoH-like protein 57 261 8.7E-78 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 BD65_113 6c323fee77b3aa7fa677717a4c298855 262 SUPERFAMILY SSF52540 57 239 4.35E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_113 6c323fee77b3aa7fa677717a4c298855 262 Gene3D G3DSA:3.40.50.300 54 262 3.1E-66 T 14-10-2018 BD65_2042 e76d10bfc7237887569bf14d83747927 644 SUPERFAMILY SSF52794 379 469 4.71E-23 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BD65_2042 e76d10bfc7237887569bf14d83747927 644 SUPERFAMILY SSF55804 501 640 2.75E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BD65_2042 e76d10bfc7237887569bf14d83747927 644 Gene3D G3DSA:3.40.50.2300 367 472 2.3E-36 T 14-10-2018 BD65_2042 e76d10bfc7237887569bf14d83747927 644 Pfam PF02378 Phosphotransferase system, EIIC 18 278 2.5E-19 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BD65_2042 e76d10bfc7237887569bf14d83747927 644 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 544 560 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain BD65_2042 e76d10bfc7237887569bf14d83747927 644 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 2.1E-184 T 14-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 BD65_2042 e76d10bfc7237887569bf14d83747927 644 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 381 456 3.6E-10 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BD65_2042 e76d10bfc7237887569bf14d83747927 644 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 501 639 5.1E-34 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BD65_2042 e76d10bfc7237887569bf14d83747927 644 Gene3D G3DSA:3.40.930.10 496 642 3.9E-54 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BD65_1719 467226b75dcf079f17235fa91e870597 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1719 467226b75dcf079f17235fa91e870597 285 Gene3D G3DSA:1.20.120.1810 2 122 7.0E-27 T 14-10-2018 BD65_1719 467226b75dcf079f17235fa91e870597 285 SUPERFAMILY SSF88659 199 284 2.62E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BD65_1719 467226b75dcf079f17235fa91e870597 285 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 4.4E-7 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_1719 467226b75dcf079f17235fa91e870597 285 Gene3D G3DSA:1.10.10.10 214 284 3.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1719 467226b75dcf079f17235fa91e870597 285 Pfam PF04542 Sigma-70 region 2 53 122 3.3E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BD65_1719 467226b75dcf079f17235fa91e870597 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 1.4E-129 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_1719 467226b75dcf079f17235fa91e870597 285 Pfam PF04545 Sigma-70, region 4 229 280 3.1E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BD65_1719 467226b75dcf079f17235fa91e870597 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1719 467226b75dcf079f17235fa91e870597 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.384 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 BD65_1719 467226b75dcf079f17235fa91e870597 285 SUPERFAMILY SSF88946 12 122 2.83E-39 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BD65_1719 467226b75dcf079f17235fa91e870597 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 281 1.3E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BD65_1719 467226b75dcf079f17235fa91e870597 285 PIRSF PIRSF000770 5 285 3.6E-33 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1719 467226b75dcf079f17235fa91e870597 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1719 467226b75dcf079f17235fa91e870597 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1719 467226b75dcf079f17235fa91e870597 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_1719 467226b75dcf079f17235fa91e870597 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BD65_2759 b4742d2d296b52fcc5a37eb918217c06 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.6 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 BD65_2759 b4742d2d296b52fcc5a37eb918217c06 413 PIRSF PIRSF016055 1 413 3.2E-196 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 BD65_2759 b4742d2d296b52fcc5a37eb918217c06 413 Pfam PF03116 NQR2, RnfD, RnfE family 43 405 1.1E-106 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 BD65_2759 b4742d2d296b52fcc5a37eb918217c06 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 5.4E-194 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 BD65_2210 18a16aff01b7b616422dc04a7ddf289a 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.715 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BD65_2210 18a16aff01b7b616422dc04a7ddf289a 100 Gene3D G3DSA:3.30.70.330 1 100 5.8E-39 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BD65_2210 18a16aff01b7b616422dc04a7ddf289a 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2210 18a16aff01b7b616422dc04a7ddf289a 100 Pfam PF00276 Ribosomal protein L23 9 95 5.0E-32 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BD65_2210 18a16aff01b7b616422dc04a7ddf289a 100 SUPERFAMILY SSF54189 6 97 8.63E-31 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_394 055bbb376a28aa46951863dd76a10907 538 Gene3D G3DSA:3.10.105.10 292 507 3.3E-193 T 14-10-2018 BD65_394 055bbb376a28aa46951863dd76a10907 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 455 3.4E-91 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BD65_394 055bbb376a28aa46951863dd76a10907 538 SUPERFAMILY SSF53850 32 530 7.51E-144 T 14-10-2018 BD65_394 055bbb376a28aa46951863dd76a10907 538 Gene3D G3DSA:3.90.76.10 67 190 3.3E-193 T 14-10-2018 BD65_394 055bbb376a28aa46951863dd76a10907 538 PIRSF PIRSF002741 6 537 2.1E-116 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BD65_394 055bbb376a28aa46951863dd76a10907 538 Gene3D G3DSA:3.40.190.10 41 519 3.3E-193 T 14-10-2018 BD65_2774 680110ec459a9a5f7edbef0a176fd710 249 Gene3D G3DSA:2.40.10.220 117 244 2.4E-35 T 14-10-2018 BD65_2774 680110ec459a9a5f7edbef0a176fd710 249 Pfam PF07238 PilZ domain 115 233 2.0E-10 T 14-10-2018 IPR009875 PilZ domain GO:0035438 BD65_2774 680110ec459a9a5f7edbef0a176fd710 249 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 4 242 28.761 T 14-10-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 BD65_2774 680110ec459a9a5f7edbef0a176fd710 249 Gene3D G3DSA:2.30.110.10 6 115 1.4E-5 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BD65_2774 680110ec459a9a5f7edbef0a176fd710 249 Pfam PF07317 Flagellar regulator YcgR 9 112 1.4E-28 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BD65_1998 e4422fb2c19bb58cd9c7e87025095a07 295 Gene3D G3DSA:1.10.3720.10 14 287 9.8E-30 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1998 e4422fb2c19bb58cd9c7e87025095a07 295 SUPERFAMILY SSF161098 31 285 1.68E-34 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1998 e4422fb2c19bb58cd9c7e87025095a07 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 293 1.1E-85 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 BD65_1998 e4422fb2c19bb58cd9c7e87025095a07 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 5.8E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1480 ef4dca1ff54f49e7a5d3e3ba2db96906 295 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 BD65_1480 ef4dca1ff54f49e7a5d3e3ba2db96906 295 SUPERFAMILY SSF53790 13 232 1.44E-83 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BD65_1480 ef4dca1ff54f49e7a5d3e3ba2db96906 295 Gene3D G3DSA:3.40.1010.10 2 120 2.6E-47 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BD65_1480 ef4dca1ff54f49e7a5d3e3ba2db96906 295 PIRSF PIRSF005917 2 288 1.7E-106 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BD65_1480 ef4dca1ff54f49e7a5d3e3ba2db96906 295 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 4.9E-110 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BD65_1480 ef4dca1ff54f49e7a5d3e3ba2db96906 295 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.346 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BD65_1480 ef4dca1ff54f49e7a5d3e3ba2db96906 295 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 3.7E-27 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BD65_1480 ef4dca1ff54f49e7a5d3e3ba2db96906 295 Gene3D G3DSA:3.30.950.10 121 241 2.9E-41 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BD65_3021 4ebe70f9cead1d4852c2d494dda2ccc8 316 Gene3D G3DSA:2.40.100.10 170 308 6.8E-55 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BD65_3021 4ebe70f9cead1d4852c2d494dda2ccc8 316 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 281 3.2E-90 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BD65_3021 4ebe70f9cead1d4852c2d494dda2ccc8 316 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 303 1.3E-116 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BD65_3021 4ebe70f9cead1d4852c2d494dda2ccc8 316 SMART SM00797 23 298 1.4E-139 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BD65_3021 4ebe70f9cead1d4852c2d494dda2ccc8 316 SUPERFAMILY SSF50891 173 287 1.25E-10 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BD65_3247 577ea11e8d473d83e4481ebb109d6f56 581 SUPERFAMILY SSF52540 330 579 4.62E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3247 577ea11e8d473d83e4481ebb109d6f56 581 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_3247 577ea11e8d473d83e4481ebb109d6f56 581 Gene3D G3DSA:1.20.1560.10 2 330 1.1E-80 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_3247 577ea11e8d473d83e4481ebb109d6f56 581 SMART SM00382 367 554 5.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3247 577ea11e8d473d83e4481ebb109d6f56 581 SUPERFAMILY SSF90123 13 326 9.29E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_3247 577ea11e8d473d83e4481ebb109d6f56 581 Pfam PF00005 ABC transporter 360 508 5.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3247 577ea11e8d473d83e4481ebb109d6f56 581 Pfam PF00664 ABC transporter transmembrane region 26 296 2.3E-59 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BD65_3247 577ea11e8d473d83e4481ebb109d6f56 581 Gene3D G3DSA:3.40.50.300 332 581 3.9E-96 T 14-10-2018 BD65_3247 577ea11e8d473d83e4481ebb109d6f56 581 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 11 580 4.1E-264 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 BD65_3083 0994d359fbf5dc019bf2c5a84f5d45e0 327 Pfam PF13353 4Fe-4S single cluster domain 23 109 1.2E-5 T 14-10-2018 BD65_3083 0994d359fbf5dc019bf2c5a84f5d45e0 327 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 327 38.21 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3083 0994d359fbf5dc019bf2c5a84f5d45e0 327 Gene3D G3DSA:3.20.20.70 1 327 9.4E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_3083 0994d359fbf5dc019bf2c5a84f5d45e0 327 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3083 0994d359fbf5dc019bf2c5a84f5d45e0 327 SUPERFAMILY SSF102114 5 303 9.29E-71 T 14-10-2018 BD65_3083 0994d359fbf5dc019bf2c5a84f5d45e0 327 SMART SM00729 14 218 1.7E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BD65_3083 0994d359fbf5dc019bf2c5a84f5d45e0 327 Pfam PF04055 Radical SAM superfamily 19 179 4.7E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_3083 0994d359fbf5dc019bf2c5a84f5d45e0 327 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 327 5.1E-105 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_3083 0994d359fbf5dc019bf2c5a84f5d45e0 327 Pfam PF06463 Molybdenum Cofactor Synthesis C 184 310 3.1E-40 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BD65_789 c2e50fc75f92a05644d56a535f6e781e 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 9.0E-51 T 14-10-2018 IPR020489 Uncharacterised protein family YejG BD65_789 c2e50fc75f92a05644d56a535f6e781e 114 Pfam PF13989 YejG-like protein 4 108 7.2E-51 T 14-10-2018 IPR020489 Uncharacterised protein family YejG BD65_1991 50f67d0bcb86af85122abf237f7a413c 456 Pfam PF12804 MobA-like NTP transferase domain 8 119 2.8E-20 T 14-10-2018 IPR025877 MobA-like NTP transferase BD65_1991 50f67d0bcb86af85122abf237f7a413c 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BD65_1991 50f67d0bcb86af85122abf237f7a413c 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 2.1E-203 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BD65_1991 50f67d0bcb86af85122abf237f7a413c 456 SUPERFAMILY SSF51161 255 437 3.08E-52 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BD65_1991 50f67d0bcb86af85122abf237f7a413c 456 SUPERFAMILY SSF53448 6 252 3.3E-67 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_1991 50f67d0bcb86af85122abf237f7a413c 456 Gene3D G3DSA:3.90.550.10 1 227 2.0E-72 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_1991 50f67d0bcb86af85122abf237f7a413c 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 4.0E-7 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_1991 50f67d0bcb86af85122abf237f7a413c 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 2.4E-4 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_1991 50f67d0bcb86af85122abf237f7a413c 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 42.912 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BD65_1991 50f67d0bcb86af85122abf237f7a413c 456 Gene3D G3DSA:2.160.10.10 228 456 1.0E-71 T 14-10-2018 BD65_359 db869c93aa31f13e87b884881ebce588 172 SUPERFAMILY SSF46767 86 169 4.58E-33 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BD65_359 db869c93aa31f13e87b884881ebce588 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 5.1E-36 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BD65_359 db869c93aa31f13e87b884881ebce588 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 21 167 40.624 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 BD65_359 db869c93aa31f13e87b884881ebce588 172 Gene3D G3DSA:1.10.10.10 86 169 8.0E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_359 db869c93aa31f13e87b884881ebce588 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BD65_359 db869c93aa31f13e87b884881ebce588 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 8 83 8.8E-12 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BD65_359 db869c93aa31f13e87b884881ebce588 172 SUPERFAMILY SSF53155 5 92 8.24E-7 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BD65_359 db869c93aa31f13e87b884881ebce588 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 3.2E-33 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BD65_2583 3f1e9d6a53ea7a365d334bca7a42358c 466 Pfam PF03496 ADP-ribosyltransferase exoenzyme 273 438 5.5E-8 T 14-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 BD65_2583 3f1e9d6a53ea7a365d334bca7a42358c 466 Gene3D G3DSA:3.90.176.10 196 449 5.8E-23 T 14-10-2018 BD65_2583 3f1e9d6a53ea7a365d334bca7a42358c 466 SUPERFAMILY SSF56399 274 450 1.34E-15 T 14-10-2018 BD65_1544 50d1e701a347a8a73eabadff19511968 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.2E-174 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BD65_1544 50d1e701a347a8a73eabadff19511968 489 SMART SM00316 37 122 2.1E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_1544 50d1e701a347a8a73eabadff19511968 489 Gene3D G3DSA:2.40.50.140 31 127 4.1E-31 T 14-10-2018 BD65_1544 50d1e701a347a8a73eabadff19511968 489 Pfam PF00575 S1 RNA binding domain 38 109 3.2E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 BD65_1544 50d1e701a347a8a73eabadff19511968 489 Pfam PF10150 Ribonuclease E/G family 124 393 9.8E-102 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BD65_1544 50d1e701a347a8a73eabadff19511968 489 SUPERFAMILY SSF50249 39 128 6.0E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_1544 50d1e701a347a8a73eabadff19511968 489 Gene3D G3DSA:3.40.1260.20 402 488 3.9E-6 T 14-10-2018 BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 4.6E-128 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 Gene3D G3DSA:1.10.8.260 262 322 6.3E-127 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 Gene3D G3DSA:3.50.50.60 7 388 6.3E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 SUPERFAMILY SSF51905 3 395 3.66E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.2E-5 T 14-10-2018 BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 3.2E-5 T 14-10-2018 BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 Gene3D G3DSA:2.40.30.10 188 339 6.3E-127 T 14-10-2018 BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 SUPERFAMILY SSF160996 190 338 4.97E-44 T 14-10-2018 BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 1.3E-8 T 14-10-2018 BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 1.3E-8 T 14-10-2018 BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.3E-8 T 14-10-2018 BD65_2107 ba2aa3882fef2533519a05654a84ff93 400 Pfam PF03486 HI0933-like protein 4 392 1.7E-154 T 14-10-2018 BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 SUPERFAMILY SSF53623 100 311 2.49E-58 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 SUPERFAMILY SSF63418 1 97 4.45E-27 T 14-10-2018 IPR035911 MurE/MurF, N-terminal BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 448 34.109 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 447 9.5E-142 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 Gene3D G3DSA:3.40.1390.10 1 80 3.0E-26 T 14-10-2018 BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 Pfam PF08245 Mur ligase middle domain 106 294 8.6E-49 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 SUPERFAMILY SSF53244 314 447 6.18E-38 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 Gene3D G3DSA:3.90.190.20 313 453 3.1E-47 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 Pfam PF01225 Mur ligase family, catalytic domain 24 92 8.0E-10 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 392 2.9E-13 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BD65_2552 f0ade1603be64c1ed2cec83eade03fc0 453 Gene3D G3DSA:3.40.1190.10 81 312 3.3E-86 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_597 2dce6f3132b7af6e030eecf0bbbe5ab2 298 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 31 289 2.3E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BD65_597 2dce6f3132b7af6e030eecf0bbbe5ab2 298 SUPERFAMILY SSF56219 28 293 2.49E-17 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BD65_597 2dce6f3132b7af6e030eecf0bbbe5ab2 298 Gene3D G3DSA:3.60.10.10 16 296 1.4E-57 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BD65_1836 16f84332d3809e56267f85e37233ff4d 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 3.0E-48 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 BD65_1836 16f84332d3809e56267f85e37233ff4d 105 SUPERFAMILY SSF47598 2 105 2.0E-57 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BD65_1836 16f84332d3809e56267f85e37233ff4d 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 2.3E-58 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 BD65_1836 16f84332d3809e56267f85e37233ff4d 105 Gene3D G3DSA:1.10.140.10 2 105 4.2E-63 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily BD65_1836 16f84332d3809e56267f85e37233ff4d 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.473 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 BD65_2235 a4e9371f2518cb705ea760514c2f5ebc 141 Gene3D G3DSA:1.10.1660.10 1 129 3.1E-37 T 14-10-2018 BD65_2235 a4e9371f2518cb705ea760514c2f5ebc 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BD65_2235 a4e9371f2518cb705ea760514c2f5ebc 141 SMART SM00422 2 71 1.5E-31 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BD65_2235 a4e9371f2518cb705ea760514c2f5ebc 141 SUPERFAMILY SSF46955 2 121 5.49E-34 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BD65_2235 a4e9371f2518cb705ea760514c2f5ebc 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 3.8E-68 T 14-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 BD65_2235 a4e9371f2518cb705ea760514c2f5ebc 141 Pfam PF13411 MerR HTH family regulatory protein 3 69 7.0E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BD65_2235 a4e9371f2518cb705ea760514c2f5ebc 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.1E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BD65_2235 a4e9371f2518cb705ea760514c2f5ebc 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.1E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BD65_2235 a4e9371f2518cb705ea760514c2f5ebc 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.1E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BD65_1201 a5811a20f4896cd642f7c22df6949ee7 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_1201 a5811a20f4896cd642f7c22df6949ee7 257 Gene3D G3DSA:3.30.2350.10 1 224 1.6E-60 T 14-10-2018 BD65_1201 a5811a20f4896cd642f7c22df6949ee7 257 Pfam PF00849 RNA pseudouridylate synthase 10 170 2.8E-34 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_1201 a5811a20f4896cd642f7c22df6949ee7 257 SUPERFAMILY SSF55120 2 237 1.09E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BD65_1585 044d2be51096e9e1e6c80a0a2ebe3d57 288 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.559 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 BD65_1585 044d2be51096e9e1e6c80a0a2ebe3d57 288 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 288 2.8E-112 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 BD65_1585 044d2be51096e9e1e6c80a0a2ebe3d57 288 Gene3D G3DSA:1.10.357.140 23 185 6.3E-41 T 14-10-2018 BD65_1585 044d2be51096e9e1e6c80a0a2ebe3d57 288 Pfam PF01040 UbiA prenyltransferase family 28 270 2.6E-68 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BD65_1585 044d2be51096e9e1e6c80a0a2ebe3d57 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site BD65_1927 527809a8242655acbfb7a403d77c7489 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site BD65_1927 527809a8242655acbfb7a403d77c7489 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.7E-24 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_1927 527809a8242655acbfb7a403d77c7489 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 45.001 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BD65_1927 527809a8242655acbfb7a403d77c7489 238 SUPERFAMILY SSF54211 1 181 5.06E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_1927 527809a8242655acbfb7a403d77c7489 238 Gene3D G3DSA:3.30.230.70 10 238 1.3E-62 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_1927 527809a8242655acbfb7a403d77c7489 238 SUPERFAMILY SSF55666 153 237 8.51E-24 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_1927 527809a8242655acbfb7a403d77c7489 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 6.1E-110 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BD65_1927 527809a8242655acbfb7a403d77c7489 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 5.6E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BD65_237 2c8f35278a8e13d795554f2944211de8 100 Pfam PF07383 Protein of unknown function (DUF1496) 41 98 7.6E-25 T 14-10-2018 IPR009971 Protein of unknown function DUF1496 BD65_480 59689bec582fcc76baaa2bdc8e10ce82 326 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 326 61.203 T 14-10-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 BD65_480 59689bec582fcc76baaa2bdc8e10ce82 326 SUPERFAMILY SSF53448 8 229 3.38E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_480 59689bec582fcc76baaa2bdc8e10ce82 326 Gene3D G3DSA:3.90.550.10 3 229 1.1E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_480 59689bec582fcc76baaa2bdc8e10ce82 326 Pfam PF00535 Glycosyl transferase family 2 11 171 5.2E-30 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BD65_2612 a1d82407e68c66b798170a7a0638864d 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 6.9E-115 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2612 a1d82407e68c66b798170a7a0638864d 233 Gene3D G3DSA:3.40.50.1580 1 232 3.1E-67 T 14-10-2018 BD65_2612 a1d82407e68c66b798170a7a0638864d 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.78 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2612 a1d82407e68c66b798170a7a0638864d 233 Pfam PF01048 Phosphorylase superfamily 2 226 9.6E-49 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BD65_2612 a1d82407e68c66b798170a7a0638864d 233 SUPERFAMILY SSF53167 1 229 2.23E-73 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BD65_1559 fdfb41f145ff0dd33e02f72240ba3b42 286 Gene3D G3DSA:3.20.20.70 1 213 2.5E-63 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1559 fdfb41f145ff0dd33e02f72240ba3b42 286 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 284 1.2E-120 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 BD65_1559 fdfb41f145ff0dd33e02f72240ba3b42 286 Pfam PF01207 Dihydrouridine synthase (Dus) 1 283 3.4E-104 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BD65_1559 fdfb41f145ff0dd33e02f72240ba3b42 286 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 59 77 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BD65_1559 fdfb41f145ff0dd33e02f72240ba3b42 286 Gene3D G3DSA:1.10.1200.80 218 286 3.2E-7 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 BD65_1559 fdfb41f145ff0dd33e02f72240ba3b42 286 SUPERFAMILY SSF51395 2 284 1.43E-76 T 14-10-2018 BD65_1559 fdfb41f145ff0dd33e02f72240ba3b42 286 PIRSF PIRSF006621 1 286 4.8E-87 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BD65_132 ea239125c18a0579a1fd68fb044bd6a2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_132 ea239125c18a0579a1fd68fb044bd6a2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_132 ea239125c18a0579a1fd68fb044bd6a2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_132 ea239125c18a0579a1fd68fb044bd6a2 301 Gene3D G3DSA:3.40.190.10 166 267 5.7E-50 T 14-10-2018 BD65_132 ea239125c18a0579a1fd68fb044bd6a2 301 SUPERFAMILY SSF46785 6 91 8.62E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_132 ea239125c18a0579a1fd68fb044bd6a2 301 SUPERFAMILY SSF53850 92 298 4.34E-38 T 14-10-2018 BD65_132 ea239125c18a0579a1fd68fb044bd6a2 301 Gene3D G3DSA:1.10.10.10 6 91 4.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_132 ea239125c18a0579a1fd68fb044bd6a2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_132 ea239125c18a0579a1fd68fb044bd6a2 301 Gene3D G3DSA:3.40.190.10 95 291 5.7E-50 T 14-10-2018 BD65_132 ea239125c18a0579a1fd68fb044bd6a2 301 Pfam PF03466 LysR substrate binding domain 91 295 2.0E-34 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_2297 e27d610049e00301994e3ce6d9033f6a 334 Pfam PF01145 SPFH domain / Band 7 family 22 241 3.9E-33 T 14-10-2018 IPR001107 Band 7 domain BD65_2297 e27d610049e00301994e3ce6d9033f6a 334 Gene3D G3DSA:3.30.479.30 53 231 3.0E-16 T 14-10-2018 BD65_2297 e27d610049e00301994e3ce6d9033f6a 334 PIRSF PIRSF005651 1 334 9.2E-107 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 BD65_2297 e27d610049e00301994e3ce6d9033f6a 334 SUPERFAMILY SSF117892 56 231 1.31E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily BD65_2297 e27d610049e00301994e3ce6d9033f6a 334 TIGRFAM TIGR01932 hflC: HflC protein 1 325 3.5E-138 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 BD65_2297 e27d610049e00301994e3ce6d9033f6a 334 SMART SM00244 18 225 2.3E-41 T 14-10-2018 IPR001107 Band 7 domain BD65_1753 bf8c0388cdccdcd42f0bfcd72709be55 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 4.4E-103 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BD65_1753 bf8c0388cdccdcd42f0bfcd72709be55 274 Gene3D G3DSA:3.10.310.10 115 261 3.9E-107 T 14-10-2018 BD65_1753 bf8c0388cdccdcd42f0bfcd72709be55 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.495 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BD65_1753 bf8c0388cdccdcd42f0bfcd72709be55 274 Gene3D G3DSA:3.10.310.10 3 270 3.9E-107 T 14-10-2018 BD65_1753 bf8c0388cdccdcd42f0bfcd72709be55 274 Pfam PF01678 Diaminopimelate epimerase 152 267 9.5E-33 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BD65_1753 bf8c0388cdccdcd42f0bfcd72709be55 274 Pfam PF01678 Diaminopimelate epimerase 3 123 1.6E-34 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BD65_1753 bf8c0388cdccdcd42f0bfcd72709be55 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BD65_1753 bf8c0388cdccdcd42f0bfcd72709be55 274 SUPERFAMILY SSF54506 2 273 9.43E-55 T 14-10-2018 BD65_2214 6094cd0fb6f0d830e9b7061db64a798e 232 Gene3D G3DSA:3.30.300.20 17 107 2.6E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BD65_2214 6094cd0fb6f0d830e9b7061db64a798e 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2214 6094cd0fb6f0d830e9b7061db64a798e 232 SMART SM00322 60 125 1.6E-6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 BD65_2214 6094cd0fb6f0d830e9b7061db64a798e 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 4.2E-100 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BD65_2214 6094cd0fb6f0d830e9b7061db64a798e 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2214 6094cd0fb6f0d830e9b7061db64a798e 232 Gene3D G3DSA:3.30.1140.32 108 208 3.9E-46 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2214 6094cd0fb6f0d830e9b7061db64a798e 232 SUPERFAMILY SSF54814 2 106 1.73E-37 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BD65_2214 6094cd0fb6f0d830e9b7061db64a798e 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.2 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BD65_2214 6094cd0fb6f0d830e9b7061db64a798e 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2214 6094cd0fb6f0d830e9b7061db64a798e 232 Pfam PF07650 KH domain 38 111 7.3E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_389 6215dc157e9818486999cc64f8fca489 218 PRINTS PR01837 MgtC/SapB protein signature 31 49 5.3E-47 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BD65_389 6215dc157e9818486999cc64f8fca489 218 PRINTS PR01837 MgtC/SapB protein signature 65 87 5.3E-47 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BD65_389 6215dc157e9818486999cc64f8fca489 218 PRINTS PR01837 MgtC/SapB protein signature 92 116 5.3E-47 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BD65_389 6215dc157e9818486999cc64f8fca489 218 PRINTS PR01837 MgtC/SapB protein signature 12 31 5.3E-47 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BD65_389 6215dc157e9818486999cc64f8fca489 218 Pfam PF02308 MgtC family 9 138 1.4E-39 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BD65_2917 06fa0db7afee201624842b21751e0784 558 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 373 549 1.1E-13 T 14-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal BD65_2917 06fa0db7afee201624842b21751e0784 558 Pfam PF04932 O-Antigen ligase 211 351 1.3E-17 T 14-10-2018 IPR007016 O-antigen ligase-related BD65_2917 06fa0db7afee201624842b21751e0784 558 Pfam PF15864 Protein glycosylation ligase 159 184 1.0E-9 T 14-10-2018 IPR031726 Protein glycosylation ligase domain BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 SUPERFAMILY SSF52540 42 354 2.08E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 SMART SM00962 100 296 3.2E-119 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 SUPERFAMILY SSF47446 298 431 1.09E-45 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 4.0E-76 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 Gene3D G3DSA:1.20.120.140 4 305 1.1E-124 T 14-10-2018 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.6E-181 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 Gene3D G3DSA:3.40.50.300 90 285 1.1E-124 T 14-10-2018 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 Gene3D G3DSA:1.10.260.30 328 450 1.6E-45 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 35.043 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 SMART SM00382 99 247 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.7E-23 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 SMART SM00963 1 86 3.5E-37 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BD65_2723 e2a881689ab2a497a831bf017ecfeee4 453 Pfam PF02978 Signal peptide binding domain 329 427 4.7E-33 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BD65_816 dee327a05b41f2ff63fd25fe1e21005b 376 Pfam PF00268 Ribonucleotide reductase, small chain 37 332 2.4E-46 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_816 dee327a05b41f2ff63fd25fe1e21005b 376 Gene3D G3DSA:1.10.620.20 2 340 7.3E-146 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 BD65_816 dee327a05b41f2ff63fd25fe1e21005b 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BD65_816 dee327a05b41f2ff63fd25fe1e21005b 376 SUPERFAMILY SSF47240 3 340 6.77E-111 T 14-10-2018 IPR009078 Ferritin-like superfamily BD65_1516 833a141e16be80523ce874675c64280d 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.1E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BD65_1516 833a141e16be80523ce874675c64280d 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 2.6E-35 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BD65_1516 833a141e16be80523ce874675c64280d 95 SUPERFAMILY SSF69754 2 95 2.75E-35 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like BD65_1516 833a141e16be80523ce874675c64280d 95 Gene3D G3DSA:3.30.160.100 1 95 2.3E-38 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 38.838 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 Gene3D G3DSA:3.30.160.40 221 306 1.0E-29 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 9.7E-112 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 Gene3D G3DSA:3.40.190.10 100 199 4.8E-83 T 14-10-2018 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 SUPERFAMILY SSF53850 5 219 1.3E-83 T 14-10-2018 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 SUPERFAMILY SSF54782 220 309 3.92E-28 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 2.2E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 2.2E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 2.2E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 2.2E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 2.2E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 Gene3D G3DSA:3.40.190.10 6 215 4.8E-83 T 14-10-2018 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 8.1E-22 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 PIRSF PIRSF001438 1 311 3.4E-121 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1757 3bb8d06b522b6be7c64357e1098805bd 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 211 8.5E-78 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_3146 eae055571532cdf8edd9c0862de807ca 228 Pfam PF02698 DUF218 domain 32 155 4.0E-17 T 14-10-2018 IPR003848 Domain of unknown function DUF218 BD65_3146 eae055571532cdf8edd9c0862de807ca 228 PIRSF PIRSF005011 1 228 1.1E-144 T 14-10-2018 IPR023604 Uncharacterised protein family SanA BD65_2760 71b0e33ea0fcac4cbdfac1738ecbf26f 266 Pfam PF04205 FMN-binding domain 151 246 1.6E-15 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BD65_2760 71b0e33ea0fcac4cbdfac1738ecbf26f 266 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 10 261 35.65 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 BD65_2760 71b0e33ea0fcac4cbdfac1738ecbf26f 266 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 10 257 2.8E-96 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 BD65_2760 71b0e33ea0fcac4cbdfac1738ecbf26f 266 PIRSF PIRSF009437 2 264 9.9E-101 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 BD65_2760 71b0e33ea0fcac4cbdfac1738ecbf26f 266 SMART SM00900 151 249 2.4E-32 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BD65_2066 d43795d93f8017c6f70868c6dec53650 174 Pfam PF06210 Protein of unknown function (DUF1003) 50 151 1.4E-27 T 14-10-2018 IPR010406 Protein of unknown function DUF1003 BD65_1268 491ca463f242a26c8fc962089eca2395 140 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 129 2.7E-55 T 14-10-2018 IPR009883 Inner membrane protein YgfX BD65_1268 491ca463f242a26c8fc962089eca2395 140 PIRSF PIRSF020653 1 138 2.4E-64 T 14-10-2018 IPR009883 Inner membrane protein YgfX BD65_1268 491ca463f242a26c8fc962089eca2395 140 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 33 129 1.0E-28 T 14-10-2018 IPR009883 Inner membrane protein YgfX BD65_2468 b1fc2e75c5d79601bd86804f4d21814b 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 142 3.7E-43 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 BD65_2468 b1fc2e75c5d79601bd86804f4d21814b 147 SUPERFAMILY SSF55729 3 146 2.58E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2468 b1fc2e75c5d79601bd86804f4d21814b 147 Gene3D G3DSA:3.40.630.30 1 147 1.5E-44 T 14-10-2018 BD65_2468 b1fc2e75c5d79601bd86804f4d21814b 147 Pfam PF00583 Acetyltransferase (GNAT) family 17 120 3.0E-15 T 14-10-2018 IPR000182 GNAT domain BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 Pfam PF01627 Hpt domain 822 901 2.0E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 SUPERFAMILY SSF47226 819 901 1.83E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 SUPERFAMILY SSF55874 510 677 5.89E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 Gene3D G3DSA:3.40.50.11620 689 799 2.3E-38 T 14-10-2018 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 9 902 26.06 T 14-10-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 Gene3D G3DSA:1.20.120.160 800 905 2.0E-10 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 SMART SM00388 454 521 9.1E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 SUPERFAMILY SSF47384 440 521 4.9E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 Pfam PF16359 RcsD-ABL domain 690 791 4.5E-37 T 14-10-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 Gene3D G3DSA:3.30.565.10 519 676 2.1E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 SMART SM00387 568 681 1.8E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 Gene3D G3DSA:1.10.287.130 465 518 2.1E-27 T 14-10-2018 BD65_810 ec360bd38c43b022ef8a48d4d3349d69 907 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 568 677 2.2E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2260 384d683b6e25318334e30e0864e588f0 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 6.7E-141 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BD65_2260 384d683b6e25318334e30e0864e588f0 433 PIRSF PIRSF004539 1 433 8.3E-174 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BD65_2260 384d683b6e25318334e30e0864e588f0 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 1.9E-194 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BD65_1181 a0cab54221140ae62c68d71cc0bb2b06 198 Gene3D G3DSA:3.30.420.10 2 197 2.5E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_1181 a0cab54221140ae62c68d71cc0bb2b06 198 Pfam PF01351 Ribonuclease HII 14 190 1.0E-39 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain BD65_1181 a0cab54221140ae62c68d71cc0bb2b06 198 SUPERFAMILY SSF53098 5 195 7.89E-69 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_1181 a0cab54221140ae62c68d71cc0bb2b06 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 39.708 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 BD65_2784 27e03c048cc991a71e2da679617be54a 225 Pfam PF07302 AroM protein 6 224 4.0E-67 T 14-10-2018 IPR010843 Uncharacterised protein family AroM BD65_2784 27e03c048cc991a71e2da679617be54a 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 4.0E-38 T 14-10-2018 IPR010843 Uncharacterised protein family AroM BD65_3057 c08b57b7f4cc97e319af6afc2d016395 347 SUPERFAMILY SSF74650 6 344 7.53E-103 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BD65_3057 c08b57b7f4cc97e319af6afc2d016395 347 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 344 9.3E-141 T 14-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 BD65_3057 c08b57b7f4cc97e319af6afc2d016395 347 Pfam PF01263 Aldose 1-epimerase 19 343 4.2E-80 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BD65_3057 c08b57b7f4cc97e319af6afc2d016395 347 PIRSF PIRSF005096 1 347 2.0E-116 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 BD65_3057 c08b57b7f4cc97e319af6afc2d016395 347 Gene3D G3DSA:2.70.98.10 8 347 7.3E-112 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 SUPERFAMILY SSF53807 47 319 2.8E-93 T 14-10-2018 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 Gene3D G3DSA:3.40.50.1980 207 318 7.1E-42 T 14-10-2018 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 Pfam PF01297 Zinc-uptake complex component A periplasmic 53 316 3.4E-79 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00690 Adhesin family signature 205 226 4.5E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00690 Adhesin family signature 258 276 4.5E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00690 Adhesin family signature 284 303 4.5E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00690 Adhesin family signature 50 68 4.5E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00690 Adhesin family signature 81 94 4.5E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00690 Adhesin family signature 94 111 4.5E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 Gene3D G3DSA:3.40.50.1980 49 206 1.1E-56 T 14-10-2018 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00691 Adhesin B signature 75 93 1.1E-36 T 14-10-2018 IPR006129 Adhesin B GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00691 Adhesin B signature 50 71 1.1E-36 T 14-10-2018 IPR006129 Adhesin B GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00691 Adhesin B signature 94 113 1.1E-36 T 14-10-2018 IPR006129 Adhesin B GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00691 Adhesin B signature 205 222 1.1E-36 T 14-10-2018 IPR006129 Adhesin B GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00691 Adhesin B signature 276 294 1.1E-36 T 14-10-2018 IPR006129 Adhesin B GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00691 Adhesin B signature 231 249 1.1E-36 T 14-10-2018 IPR006129 Adhesin B GO:0007155 BD65_505 930f05cfa98dddb463b8366bb8bb7e73 320 PRINTS PR00691 Adhesin B signature 254 271 1.1E-36 T 14-10-2018 IPR006129 Adhesin B GO:0007155 BD65_1697 f337bacbe92ff4c08694618b61901dc1 299 SUPERFAMILY SSF103481 37 131 6.41E-8 T 14-10-2018 BD65_1697 f337bacbe92ff4c08694618b61901dc1 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 1.2E-83 T 14-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 BD65_1697 f337bacbe92ff4c08694618b61901dc1 299 Pfam PF00892 EamA-like transporter family 139 274 9.1E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_1697 f337bacbe92ff4c08694618b61901dc1 299 Pfam PF00892 EamA-like transporter family 1 129 3.4E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_1697 f337bacbe92ff4c08694618b61901dc1 299 SUPERFAMILY SSF103481 200 277 1.1E-7 T 14-10-2018 BD65_1244 8f3dd0ecb73731a2e4577c2ecae439b3 378 SUPERFAMILY SSF53067 11 154 1.55E-17 T 14-10-2018 BD65_1244 8f3dd0ecb73731a2e4577c2ecae439b3 378 Pfam PF05134 Type II secretion system (T2SS), protein L 19 188 1.9E-19 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain BD65_1244 8f3dd0ecb73731a2e4577c2ecae439b3 378 Gene3D G3DSA:3.30.420.370 152 187 8.8E-30 T 14-10-2018 BD65_1244 8f3dd0ecb73731a2e4577c2ecae439b3 378 Gene3D G3DSA:3.30.420.380 11 151 8.8E-30 T 14-10-2018 BD65_516 738d3c9c7d394d53139d8dd8fc342f82 263 SUPERFAMILY SSF46785 13 85 1.99E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_516 738d3c9c7d394d53139d8dd8fc342f82 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 4.4E-41 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal BD65_516 738d3c9c7d394d53139d8dd8fc342f82 263 SUPERFAMILY SSF55781 77 259 1.57E-51 T 14-10-2018 BD65_516 738d3c9c7d394d53139d8dd8fc342f82 263 SMART SM00346 13 102 2.3E-34 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BD65_516 738d3c9c7d394d53139d8dd8fc342f82 263 Gene3D G3DSA:1.10.10.10 1 80 1.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_516 738d3c9c7d394d53139d8dd8fc342f82 263 Gene3D G3DSA:3.30.450.40 85 263 1.4E-64 T 14-10-2018 IPR029016 GAF-like domain superfamily BD65_516 738d3c9c7d394d53139d8dd8fc342f82 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 5.7E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BD65_821 704818bc30795fdd36f85617eb15932a 121 Pfam PF04138 GtrA-like protein 7 116 2.2E-10 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 BD65_821 704818bc30795fdd36f85617eb15932a 121 PIRSF PIRSF006298 1 118 1.2E-44 T 14-10-2018 IPR016480 Glucose translocase, bactoprenol-linked BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 Gene3D G3DSA:1.10.240.10 192 304 2.8E-142 T 14-10-2018 BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 Pfam PF00579 tRNA synthetases class I (W and Y) 8 291 4.9E-88 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 9 337 42.601 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 Gene3D G3DSA:3.40.50.620 12 335 2.8E-142 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 72 91 4.1E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 148 169 4.1E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 22 38 4.1E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 4.1E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 18 27 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 8 336 2.2E-117 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BD65_2163 a22feaeb62704985a751c98cb67c1e3e 340 SUPERFAMILY SSF52374 11 336 1.08E-98 T 14-10-2018 BD65_3028 3044d2ec2c141a6111a89884d9aebafb 115 PIRSF PIRSF000169 1 115 1.5E-40 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 BD65_3028 3044d2ec2c141a6111a89884d9aebafb 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 2.9E-35 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 BD65_3028 3044d2ec2c141a6111a89884d9aebafb 115 Gene3D G3DSA:1.20.1300.10 1 115 4.1E-30 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3028 3044d2ec2c141a6111a89884d9aebafb 115 SUPERFAMILY SSF81343 5 114 1.31E-28 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_1125 905681d58b5343864bf5fef1b864c1fc 286 Gene3D G3DSA:1.10.10.800 134 212 4.5E-40 T 14-10-2018 BD65_1125 905681d58b5343864bf5fef1b864c1fc 286 SUPERFAMILY SSF53474 3 286 1.23E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1125 905681d58b5343864bf5fef1b864c1fc 286 Pfam PF12146 Serine aminopeptidase, S33 23 262 2.4E-20 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 BD65_1125 905681d58b5343864bf5fef1b864c1fc 286 Gene3D G3DSA:3.40.50.1820 22 267 4.5E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_2303 f585203a25dcf84c64b00bd8d8f4af8d 206 Pfam PF06551 Protein of unknown function (DUF1120) 31 102 3.7E-9 T 14-10-2018 IPR010546 Protein of unknown function DUF1120 BD65_1229 2050e0a8724a7e32282d8d2fa5cdbc65 175 SUPERFAMILY SSF55811 6 155 4.2E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_1229 2050e0a8724a7e32282d8d2fa5cdbc65 175 Gene3D G3DSA:3.90.79.10 1 160 3.6E-53 T 14-10-2018 BD65_1229 2050e0a8724a7e32282d8d2fa5cdbc65 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.222 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH BD65_1229 2050e0a8724a7e32282d8d2fa5cdbc65 175 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BD65_1229 2050e0a8724a7e32282d8d2fa5cdbc65 175 Pfam PF00293 NUDIX domain 7 146 1.1E-28 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_1229 2050e0a8724a7e32282d8d2fa5cdbc65 175 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.2E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BD65_1229 2050e0a8724a7e32282d8d2fa5cdbc65 175 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.2E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BD65_773 8caab62098ec32cc6f588ac352c2b40a 382 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 182 4.5E-67 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal BD65_773 8caab62098ec32cc6f588ac352c2b40a 382 SUPERFAMILY SSF48695 13 185 2.69E-49 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BD65_773 8caab62098ec32cc6f588ac352c2b40a 382 Gene3D G3DSA:1.10.3820.10 6 188 2.6E-38 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily BD65_773 8caab62098ec32cc6f588ac352c2b40a 382 PIRSF PIRSF000014 2 382 9.5E-142 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 BD65_2563 085163cf44670717770b1b62246b7523 174 Pfam PF05258 Protein of unknown function (DUF721) 26 98 4.1E-14 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 BD65_31 dfe0095ecae29c84398b39402722bed8 77 Pfam PF05717 IS66 Orf2 like protein 8 68 8.5E-23 T 14-10-2018 IPR008878 Transposase IS66, Orf2 BD65_2921 9b2f5041b410f1767fa6065132087fb7 141 Pfam PF13356 Arm DNA-binding domain 3 87 3.1E-20 T 14-10-2018 IPR025166 Integrase, DNA-binding domain BD65_2921 9b2f5041b410f1767fa6065132087fb7 141 Gene3D G3DSA:3.30.160.390 1 88 2.6E-37 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily BD65_2921 9b2f5041b410f1767fa6065132087fb7 141 Gene3D G3DSA:1.10.150.130 99 141 3.6E-10 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BD65_1715 2f0c5c9e5bbb28d024dc6be3f0c6dd20 388 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 2.6E-159 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BD65_1715 2f0c5c9e5bbb28d024dc6be3f0c6dd20 388 SUPERFAMILY SSF110738 1 375 8.89E-143 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 BD65_1715 2f0c5c9e5bbb28d024dc6be3f0c6dd20 388 PIRSF PIRSF006078 1 378 1.4E-133 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BD65_1715 2f0c5c9e5bbb28d024dc6be3f0c6dd20 388 Gene3D G3DSA:3.40.50.10350 1 362 2.6E-141 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold BD65_1715 2f0c5c9e5bbb28d024dc6be3f0c6dd20 388 Pfam PF02595 Glycerate kinase family 3 374 1.3E-148 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BD65_1715 2f0c5c9e5bbb28d024dc6be3f0c6dd20 388 Gene3D G3DSA:3.90.1510.10 42 276 2.6E-141 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 BD65_3221 83dca6352dd486291995a15f3a35cfa3 73 Gene3D G3DSA:2.40.50.140 2 65 7.4E-27 T 14-10-2018 BD65_3221 83dca6352dd486291995a15f3a35cfa3 73 SMART SM00357 3 67 3.6E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_3221 83dca6352dd486291995a15f3a35cfa3 73 SUPERFAMILY SSF50249 1 66 1.95E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3221 83dca6352dd486291995a15f3a35cfa3 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 3.7E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3221 83dca6352dd486291995a15f3a35cfa3 73 PIRSF PIRSF002599 1 73 5.5E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BD65_3221 83dca6352dd486291995a15f3a35cfa3 73 PRINTS PR00050 Cold shock protein signature 4 19 5.2E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3221 83dca6352dd486291995a15f3a35cfa3 73 PRINTS PR00050 Cold shock protein signature 40 58 5.2E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3221 83dca6352dd486291995a15f3a35cfa3 73 PRINTS PR00050 Cold shock protein signature 25 34 5.2E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3221 83dca6352dd486291995a15f3a35cfa3 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 67 1.8E-41 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 BD65_3221 83dca6352dd486291995a15f3a35cfa3 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 SUPERFAMILY SSF49354 24 141 2.17E-37 T 14-10-2018 IPR008962 PapD-like superfamily BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 14-10-2018 IPR018046 Pili assembly chaperone, conserved site BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 2.2E-36 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 Gene3D G3DSA:2.60.40.10 23 141 1.8E-38 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 Gene3D G3DSA:2.60.40.10 147 240 1.5E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 SUPERFAMILY SSF49584 151 240 1.14E-24 T 14-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 228 2.2E-15 T 14-10-2018 IPR016148 Pili assembly chaperone, C-terminal BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 PRINTS PR00969 Pili chaperone signature 24 33 5.2E-31 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 PRINTS PR00969 Pili chaperone signature 123 138 5.2E-31 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 PRINTS PR00969 Pili chaperone signature 70 91 5.2E-31 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 PRINTS PR00969 Pili chaperone signature 100 117 5.2E-31 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_2912 35591a0cc3b08744e816ed0f35b98f0c 247 PRINTS PR00969 Pili chaperone signature 162 177 5.2E-31 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_1644 3bc08db476edf7ec333e7b7a934261fe 248 Pfam PF00899 ThiF family 9 241 1.3E-66 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BD65_1644 3bc08db476edf7ec333e7b7a934261fe 248 SUPERFAMILY SSF69572 1 246 3.92E-83 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BD65_1644 3bc08db476edf7ec333e7b7a934261fe 248 Gene3D G3DSA:3.40.50.720 1 248 3.2E-97 T 14-10-2018 BD65_3246 a6091f3f3ae7b7831231a3f13b7eff19 764 SUPERFAMILY SSF56281 501 752 1.83E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_3246 a6091f3f3ae7b7831231a3f13b7eff19 764 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 107 728 2.0E-181 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 BD65_3246 a6091f3f3ae7b7831231a3f13b7eff19 764 SMART SM00849 512 699 8.4E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_3246 a6091f3f3ae7b7831231a3f13b7eff19 764 Pfam PF00753 Metallo-beta-lactamase superfamily 512 691 7.5E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_3246 a6091f3f3ae7b7831231a3f13b7eff19 764 Gene3D G3DSA:3.60.15.10 501 742 4.5E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_3246 a6091f3f3ae7b7831231a3f13b7eff19 764 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 228 412 3.2E-40 T 14-10-2018 IPR004477 ComEC/Rec2-related protein BD65_3246 a6091f3f3ae7b7831231a3f13b7eff19 764 Pfam PF03772 Competence protein 207 476 6.4E-54 T 14-10-2018 IPR004477 ComEC/Rec2-related protein BD65_3246 a6091f3f3ae7b7831231a3f13b7eff19 764 Pfam PF13567 Domain of unknown function (DUF4131) 28 160 4.8E-14 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 BD65_65 75f9c50ea044fa66634f1b8527024479 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 7.3E-89 T 14-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 BD65_65 75f9c50ea044fa66634f1b8527024479 477 Gene3D G3DSA:3.30.1360.60 397 477 3.0E-31 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BD65_65 75f9c50ea044fa66634f1b8527024479 477 Pfam PF00367 phosphotransferase system, EIIB 404 436 2.1E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BD65_65 75f9c50ea044fa66634f1b8527024479 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 4.8E-229 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 BD65_65 75f9c50ea044fa66634f1b8527024479 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 1.5E-84 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BD65_65 75f9c50ea044fa66634f1b8527024479 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BD65_65 75f9c50ea044fa66634f1b8527024479 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 1.6E-25 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BD65_65 75f9c50ea044fa66634f1b8527024479 477 SUPERFAMILY SSF55604 401 474 1.07E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BD65_2838 e53dd90094f252e321aff51a9d6628cb 143 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 6.2E-31 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BD65_2838 e53dd90094f252e321aff51a9d6628cb 143 Pfam PF13279 Thioesterase-like superfamily 12 125 4.5E-17 T 14-10-2018 BD65_2838 e53dd90094f252e321aff51a9d6628cb 143 Gene3D G3DSA:3.10.129.10 1 130 2.4E-35 T 14-10-2018 BD65_2838 e53dd90094f252e321aff51a9d6628cb 143 PIRSF PIRSF003230 1 134 4.5E-21 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BD65_2838 e53dd90094f252e321aff51a9d6628cb 143 SUPERFAMILY SSF54637 2 129 3.6E-36 T 14-10-2018 IPR029069 HotDog domain superfamily BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 435 445 3.8E-41 T 14-10-2018 IPR001775 GspD/PilQ family BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 533 551 3.8E-41 T 14-10-2018 IPR001775 GspD/PilQ family BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 556 570 3.8E-41 T 14-10-2018 IPR001775 GspD/PilQ family BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 332 342 3.8E-41 T 14-10-2018 IPR001775 GspD/PilQ family BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 400 424 3.8E-41 T 14-10-2018 IPR001775 GspD/PilQ family BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 Gene3D G3DSA:3.30.1370.120 179 247 6.2E-18 T 14-10-2018 IPR038591 NolW-like superfamily BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 Pfam PF03958 Bacterial type II/III secretion system short domain 181 249 1.3E-12 T 14-10-2018 IPR005644 NolW-like BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 Pfam PF03958 Bacterial type II/III secretion system short domain 117 177 2.5E-8 T 14-10-2018 IPR005644 NolW-like BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 Pfam PF03958 Bacterial type II/III secretion system short domain 255 332 9.3E-15 T 14-10-2018 IPR005644 NolW-like BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 Pfam PF00263 Bacterial type II and III secretion system protein 404 569 7.2E-47 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 Gene3D G3DSA:3.30.1370.120 11 176 2.7E-51 T 14-10-2018 IPR038591 NolW-like superfamily BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 Gene3D G3DSA:3.30.1370.120 248 333 5.7E-16 T 14-10-2018 IPR038591 NolW-like superfamily BD65_2699 e162c197c5052dd5b94fd7dd20f99b92 629 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 20 573 8.8E-159 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 BD65_2005 0215d721c7080afb85cc006a1f7e8d53 634 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 445 599 3.8E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_2005 0215d721c7080afb85cc006a1f7e8d53 634 Pfam PF02743 Cache domain 46 292 1.7E-25 T 14-10-2018 IPR033479 Double Cache domain 1 BD65_2005 0215d721c7080afb85cc006a1f7e8d53 634 SUPERFAMILY SSF58104 353 634 7.32E-72 T 14-10-2018 BD65_2005 0215d721c7080afb85cc006a1f7e8d53 634 Gene3D G3DSA:3.30.450.20 36 204 6.6E-19 T 14-10-2018 BD65_2005 0215d721c7080afb85cc006a1f7e8d53 634 SMART SM00304 331 385 5.9E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2005 0215d721c7080afb85cc006a1f7e8d53 634 SMART SM00283 386 633 6.7E-80 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_2005 0215d721c7080afb85cc006a1f7e8d53 634 Gene3D G3DSA:1.10.287.950 332 634 8.7E-83 T 14-10-2018 BD65_2688 2e1863e073f62bc6279aec06b9330fc5 128 Gene3D G3DSA:1.20.58.1630 30 127 7.1E-29 T 14-10-2018 IPR038432 PulS/OutS-like superfamily BD65_2688 2e1863e073f62bc6279aec06b9330fc5 128 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 17 120 2.5E-29 T 14-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like BD65_2456 ee2143a70c909da188946b055c235eca 364 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BD65_2456 ee2143a70c909da188946b055c235eca 364 Gene3D G3DSA:3.40.50.1970 2 159 6.8E-45 T 14-10-2018 BD65_2456 ee2143a70c909da188946b055c235eca 364 PIRSF PIRSF000112 1 358 2.2E-93 T 14-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 BD65_2456 ee2143a70c909da188946b055c235eca 364 Gene3D G3DSA:1.20.1090.10 160 364 6.1E-79 T 14-10-2018 BD65_2456 ee2143a70c909da188946b055c235eca 364 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BD65_2456 ee2143a70c909da188946b055c235eca 364 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 6.3E-69 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BD65_2456 ee2143a70c909da188946b055c235eca 364 SUPERFAMILY SSF56796 2 353 7.72E-91 T 14-10-2018 BD65_2433 dfe835c6498d378340856c558507083f 1040 SUPERFAMILY SSF49863 918 1038 6.67E-37 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 BD65_2433 dfe835c6498d378340856c558507083f 1040 Pfam PF09092 Lyase, N terminal 50 244 3.9E-55 T 14-10-2018 IPR015176 Lyase, N-terminal BD65_2433 dfe835c6498d378340856c558507083f 1040 Gene3D G3DSA:1.50.10.100 249 637 4.6E-111 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 BD65_2433 dfe835c6498d378340856c558507083f 1040 Gene3D G3DSA:2.70.98.10 638 916 1.7E-97 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BD65_2433 dfe835c6498d378340856c558507083f 1040 PIRSF PIRSF034515 5 1040 0.0 T 14-10-2018 IPR024200 Chondroitin sulfate ABC endolyase GO:0005975|GO:0034000 BD65_2433 dfe835c6498d378340856c558507083f 1040 Gene3D G3DSA:2.60.220.10 918 1040 4.2E-36 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 BD65_2433 dfe835c6498d378340856c558507083f 1040 SUPERFAMILY SSF48230 250 636 5.04E-144 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 BD65_2433 dfe835c6498d378340856c558507083f 1040 SUPERFAMILY SSF74650 638 912 3.14E-82 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BD65_2433 dfe835c6498d378340856c558507083f 1040 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 644 896 3.0E-31 T 14-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 BD65_2433 dfe835c6498d378340856c558507083f 1040 SUPERFAMILY SSF49785 37 247 1.02E-74 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BD65_2433 dfe835c6498d378340856c558507083f 1040 Gene3D G3DSA:2.60.120.430 37 248 8.2E-63 T 14-10-2018 BD65_2433 dfe835c6498d378340856c558507083f 1040 Pfam PF09093 Lyase, catalytic 261 622 5.0E-128 T 14-10-2018 IPR015177 Lyase, catalytic BD65_1574 0dd97fd4060eddf22ba1c82bdb0e035e 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BD65_1574 0dd97fd4060eddf22ba1c82bdb0e035e 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 6.1E-37 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BD65_1574 0dd97fd4060eddf22ba1c82bdb0e035e 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 6.1E-37 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BD65_1574 0dd97fd4060eddf22ba1c82bdb0e035e 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 6.1E-37 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BD65_1574 0dd97fd4060eddf22ba1c82bdb0e035e 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 6.1E-37 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BD65_1574 0dd97fd4060eddf22ba1c82bdb0e035e 397 Gene3D G3DSA:3.90.1150.10 11 392 1.5E-154 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1574 0dd97fd4060eddf22ba1c82bdb0e035e 397 SUPERFAMILY SSF53383 1 395 1.56E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_1574 0dd97fd4060eddf22ba1c82bdb0e035e 397 Gene3D G3DSA:3.40.640.10 60 301 1.5E-154 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_1574 0dd97fd4060eddf22ba1c82bdb0e035e 397 Pfam PF00155 Aminotransferase class I and II 27 393 2.1E-80 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BD65_3078 eaebc96d175257779e93ef1780630677 364 Pfam PF01497 Periplasmic binding protein 98 287 7.4E-19 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain BD65_3078 eaebc96d175257779e93ef1780630677 364 Gene3D G3DSA:3.40.50.1980 21 355 6.7E-75 T 14-10-2018 BD65_3078 eaebc96d175257779e93ef1780630677 364 SUPERFAMILY SSF53807 36 346 3.73E-43 T 14-10-2018 BD65_851 26b1585354c443f2d33bc29cc1904b41 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 BD65_851 26b1585354c443f2d33bc29cc1904b41 610 Pfam PF03600 Citrate transporter 18 196 4.9E-38 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BD65_851 26b1585354c443f2d33bc29cc1904b41 610 SUPERFAMILY SSF116726 232 289 2.09E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_851 26b1585354c443f2d33bc29cc1904b41 610 Gene3D G3DSA:3.30.70.1450 324 398 4.2E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_851 26b1585354c443f2d33bc29cc1904b41 610 Gene3D G3DSA:3.30.70.1450 229 306 3.6E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_851 26b1585354c443f2d33bc29cc1904b41 610 Pfam PF03600 Citrate transporter 430 608 2.2E-18 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BD65_851 26b1585354c443f2d33bc29cc1904b41 610 Pfam PF02080 TrkA-C domain 231 298 4.2E-15 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BD65_851 26b1585354c443f2d33bc29cc1904b41 610 Pfam PF02080 TrkA-C domain 326 395 4.6E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BD65_851 26b1585354c443f2d33bc29cc1904b41 610 SUPERFAMILY SSF116726 322 396 3.92E-18 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_1340 1ac547d38c16e9ede05d4a0884f4e971 544 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_1340 1ac547d38c16e9ede05d4a0884f4e971 544 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 532 1.2E-264 T 14-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 BD65_1340 1ac547d38c16e9ede05d4a0884f4e971 544 Gene3D G3DSA:3.30.300.310 437 541 1.5E-28 T 14-10-2018 BD65_1340 1ac547d38c16e9ede05d4a0884f4e971 544 Pfam PF00501 AMP-binding enzyme 32 441 8.8E-81 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_1340 1ac547d38c16e9ede05d4a0884f4e971 544 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 525 1.4E-10 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BD65_1340 1ac547d38c16e9ede05d4a0884f4e971 544 SUPERFAMILY SSF56801 7 536 7.06E-129 T 14-10-2018 BD65_1340 1ac547d38c16e9ede05d4a0884f4e971 544 Gene3D G3DSA:3.40.50.12780 2 435 3.9E-131 T 14-10-2018 BD65_1213 9955f6b29d39f32198db0ed3f81ca815 389 SUPERFAMILY SSF50685 25 356 9.77E-110 T 14-10-2018 IPR036908 RlpA-like domain superfamily BD65_1213 9955f6b29d39f32198db0ed3f81ca815 389 PIRSF PIRSF019422 1 366 5.6E-86 T 14-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A BD65_1213 9955f6b29d39f32198db0ed3f81ca815 389 SMART SM00925 125 260 1.1E-72 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 BD65_1213 9955f6b29d39f32198db0ed3f81ca815 389 Pfam PF03562 MltA specific insert domain 90 260 4.0E-42 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 BD65_1213 9955f6b29d39f32198db0ed3f81ca815 389 Gene3D G3DSA:2.40.40.10 54 356 3.2E-156 T 14-10-2018 IPR036908 RlpA-like domain superfamily BD65_1213 9955f6b29d39f32198db0ed3f81ca815 389 Pfam PF06725 3D domain 280 357 1.5E-24 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BD65_1213 9955f6b29d39f32198db0ed3f81ca815 389 Gene3D G3DSA:2.40.240.50 125 265 3.2E-156 T 14-10-2018 BD65_3203 78a7bdb72e71532015ac546705bb772d 243 SMART SM00079 22 243 0.001 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BD65_3203 78a7bdb72e71532015ac546705bb772d 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 4.4E-86 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 BD65_3203 78a7bdb72e71532015ac546705bb772d 243 SUPERFAMILY SSF53850 1 242 4.06E-71 T 14-10-2018 BD65_3203 78a7bdb72e71532015ac546705bb772d 243 SMART SM00062 22 242 2.6E-83 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_3203 78a7bdb72e71532015ac546705bb772d 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site BD65_3203 78a7bdb72e71532015ac546705bb772d 243 Gene3D G3DSA:3.40.190.10 26 240 8.0E-83 T 14-10-2018 BD65_3203 78a7bdb72e71532015ac546705bb772d 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 3.1E-71 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_3203 78a7bdb72e71532015ac546705bb772d 243 Gene3D G3DSA:3.40.190.10 108 201 8.0E-83 T 14-10-2018 BD65_2800 d715ed20100fd1c877425245b560cc12 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.297 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BD65_2800 d715ed20100fd1c877425245b560cc12 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 367 1.8E-190 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BD65_2800 d715ed20100fd1c877425245b560cc12 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 4.8E-93 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BD65_2800 d715ed20100fd1c877425245b560cc12 374 SUPERFAMILY SSF51713 2 364 4.45E-163 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BD65_2800 d715ed20100fd1c877425245b560cc12 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 8.0E-180 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BD65_2800 d715ed20100fd1c877425245b560cc12 374 Gene3D G3DSA:3.20.20.105 1 367 4.5E-170 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BD65_1718 674177a095cc2661a33382a5626f683a 372 Pfam PF05651 Putative sugar diacid recognition 6 139 2.2E-52 T 14-10-2018 IPR008599 Putative sugar diacid recognition BD65_1718 674177a095cc2661a33382a5626f683a 372 Pfam PF13556 PucR C-terminal helix-turn-helix domain 312 370 9.3E-21 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BD65_1718 674177a095cc2661a33382a5626f683a 372 Gene3D G3DSA:1.10.10.2840 245 372 1.4E-20 T 14-10-2018 BD65_510 61fa5c405dfc7b75dcab8fe97d814997 184 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 181 5.0E-82 T 14-10-2018 BD65_510 61fa5c405dfc7b75dcab8fe97d814997 184 Pfam PF14002 YniB-like protein 15 179 8.7E-80 T 14-10-2018 IPR025229 YniB-like protein BD65_386 5ff083fccd5cbffe1c04b32da97bc752 330 Gene3D G3DSA:3.40.50.720 2 317 2.3E-138 T 14-10-2018 BD65_386 5ff083fccd5cbffe1c04b32da97bc752 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BD65_386 5ff083fccd5cbffe1c04b32da97bc752 330 SUPERFAMILY SSF51735 102 298 1.29E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_386 5ff083fccd5cbffe1c04b32da97bc752 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 329 4.5E-32 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BD65_386 5ff083fccd5cbffe1c04b32da97bc752 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BD65_386 5ff083fccd5cbffe1c04b32da97bc752 330 Gene3D G3DSA:3.40.50.720 102 297 2.3E-138 T 14-10-2018 BD65_386 5ff083fccd5cbffe1c04b32da97bc752 330 SUPERFAMILY SSF52283 2 135 2.84E-43 T 14-10-2018 BD65_386 5ff083fccd5cbffe1c04b32da97bc752 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 2.2E-54 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BD65_386 5ff083fccd5cbffe1c04b32da97bc752 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BD65_2313 0128562c0441a9fe9e319173b2daeb1b 130 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 BD65_2313 0128562c0441a9fe9e319173b2daeb1b 130 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.5E-37 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2313 0128562c0441a9fe9e319173b2daeb1b 130 Gene3D G3DSA:3.30.70.60 1 92 6.4E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BD65_2313 0128562c0441a9fe9e319173b2daeb1b 130 Pfam PF01250 Ribosomal protein S6 3 91 1.3E-27 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2313 0128562c0441a9fe9e319173b2daeb1b 130 SUPERFAMILY SSF54995 1 103 1.7E-37 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2313 0128562c0441a9fe9e319173b2daeb1b 130 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.04 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 BD65_1566 a00ac76b174ee14425d3389bed533a1a 307 SUPERFAMILY SSF53850 90 292 3.97E-42 T 14-10-2018 BD65_1566 a00ac76b174ee14425d3389bed533a1a 307 Gene3D G3DSA:3.40.190.290 92 291 6.3E-49 T 14-10-2018 BD65_1566 a00ac76b174ee14425d3389bed533a1a 307 Pfam PF03466 LysR substrate binding domain 89 289 3.4E-43 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_1566 a00ac76b174ee14425d3389bed533a1a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1566 a00ac76b174ee14425d3389bed533a1a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1566 a00ac76b174ee14425d3389bed533a1a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1566 a00ac76b174ee14425d3389bed533a1a 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.9E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_1566 a00ac76b174ee14425d3389bed533a1a 307 Gene3D G3DSA:1.10.10.10 1 91 1.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1566 a00ac76b174ee14425d3389bed533a1a 307 SUPERFAMILY SSF46785 1 85 1.65E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2474 9e84c618f8efbce640384a2286162df4 425 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.2E-21 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BD65_2474 9e84c618f8efbce640384a2286162df4 425 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 422 2.4E-75 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BD65_2474 9e84c618f8efbce640384a2286162df4 425 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 422 9.8E-153 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 BD65_2474 9e84c618f8efbce640384a2286162df4 425 Pfam PF07670 Nucleoside recognition 99 195 1.2E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 SUPERFAMILY SSF46894 170 233 2.52E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 205 1.2E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 217 1.2E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 189 1.2E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 174 228 1.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 SMART SM00448 7 146 2.0E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 Gene3D G3DSA:1.10.10.10 150 234 8.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 SMART SM00421 172 229 2.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 Gene3D G3DSA:3.40.50.2300 1 149 4.1E-18 T 14-10-2018 BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 SUPERFAMILY SSF52172 5 157 1.2E-16 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2654 5c6aa767f9ef16bd1b35183eb8e44860 234 Pfam PF00072 Response regulator receiver domain 35 143 1.5E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2975 974df329151fbaf46bd1866fee17f71e 224 SUPERFAMILY SSF161098 14 209 1.31E-38 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2975 974df329151fbaf46bd1866fee17f71e 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 6.6E-24 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BD65_2975 974df329151fbaf46bd1866fee17f71e 224 Gene3D G3DSA:1.10.3720.10 2 224 4.5E-50 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2975 974df329151fbaf46bd1866fee17f71e 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 2.9E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_2241 bad29ceee9d03c3ed124aea394bfafa7 170 SUPERFAMILY SSF56420 3 164 3.79E-61 T 14-10-2018 IPR036821 Peptide deformylase superfamily BD65_2241 bad29ceee9d03c3ed124aea394bfafa7 170 Pfam PF01327 Polypeptide deformylase 4 152 4.4E-50 T 14-10-2018 IPR023635 Peptide deformylase BD65_2241 bad29ceee9d03c3ed124aea394bfafa7 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.24 T 14-10-2018 IPR023635 Peptide deformylase BD65_2241 bad29ceee9d03c3ed124aea394bfafa7 170 PIRSF PIRSF004749 1 169 8.7E-56 T 14-10-2018 IPR023635 Peptide deformylase BD65_2241 bad29ceee9d03c3ed124aea394bfafa7 170 Gene3D G3DSA:3.90.45.10 2 169 9.4E-67 T 14-10-2018 IPR036821 Peptide deformylase superfamily BD65_2241 bad29ceee9d03c3ed124aea394bfafa7 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.7E-65 T 14-10-2018 IPR023635 Peptide deformylase BD65_2241 bad29ceee9d03c3ed124aea394bfafa7 170 PRINTS PR01576 Peptide deformylase signature 101 119 5.4E-38 T 14-10-2018 IPR023635 Peptide deformylase BD65_2241 bad29ceee9d03c3ed124aea394bfafa7 170 PRINTS PR01576 Peptide deformylase signature 120 149 5.4E-38 T 14-10-2018 IPR023635 Peptide deformylase BD65_2241 bad29ceee9d03c3ed124aea394bfafa7 170 PRINTS PR01576 Peptide deformylase signature 33 62 5.4E-38 T 14-10-2018 IPR023635 Peptide deformylase BD65_2241 bad29ceee9d03c3ed124aea394bfafa7 170 PRINTS PR01576 Peptide deformylase signature 89 100 5.4E-38 T 14-10-2018 IPR023635 Peptide deformylase BD65_2645 d56de28bae6ca7bc7d790030b47754ce 327 Pfam PF00881 Nitroreductase family 160 207 2.6E-11 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BD65_2645 d56de28bae6ca7bc7d790030b47754ce 327 Gene3D G3DSA:3.40.109.10 150 326 4.6E-29 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BD65_2645 d56de28bae6ca7bc7d790030b47754ce 327 SUPERFAMILY SSF55469 157 326 1.01E-30 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BD65_1737 8bc53c0bb8cc09125e008d139d8ea27c 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.0E-61 T 14-10-2018 BD65_1737 8bc53c0bb8cc09125e008d139d8ea27c 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 2.6E-27 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BD65_1737 8bc53c0bb8cc09125e008d139d8ea27c 267 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 BD65_1737 8bc53c0bb8cc09125e008d139d8ea27c 267 Gene3D G3DSA:3.40.50.1000 5 256 1.1E-80 T 14-10-2018 IPR023214 HAD superfamily BD65_1737 8bc53c0bb8cc09125e008d139d8ea27c 267 SUPERFAMILY SSF56784 1 265 5.71E-69 T 14-10-2018 IPR036412 HAD-like superfamily BD65_1737 8bc53c0bb8cc09125e008d139d8ea27c 267 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 14-10-2018 BD65_1737 8bc53c0bb8cc09125e008d139d8ea27c 267 Gene3D G3DSA:3.30.1240.10 82 186 1.1E-80 T 14-10-2018 BD65_1737 8bc53c0bb8cc09125e008d139d8ea27c 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 6.3E-63 T 14-10-2018 IPR000150 Cof family GO:0016787 BD65_300 1ca574ddb4c332b3387a3d4b63e9f055 253 Gene3D G3DSA:1.20.144.10 2 253 2.4E-79 T 14-10-2018 BD65_300 1ca574ddb4c332b3387a3d4b63e9f055 253 SMART SM00014 76 227 4.6E-25 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BD65_300 1ca574ddb4c332b3387a3d4b63e9f055 253 Pfam PF01569 PAP2 superfamily 80 232 4.8E-29 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BD65_300 1ca574ddb4c332b3387a3d4b63e9f055 253 SUPERFAMILY SSF48317 10 234 2.62E-29 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 SUPERFAMILY SSF58104 330 611 1.57E-75 T 14-10-2018 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 SMART SM00304 310 362 1.6E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 Gene3D G3DSA:1.10.287.950 309 612 1.3E-93 T 14-10-2018 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 Pfam PF16591 Helical bimodular sensor domain 57 278 4.9E-14 T 14-10-2018 IPR032255 Helical bimodular sensor domain BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 SMART SM01358 39 288 3.3E-40 T 14-10-2018 IPR032255 Helical bimodular sensor domain BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 Pfam PF00672 HAMP domain 310 358 4.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 Gene3D G3DSA:1.20.1440.210 57 265 4.3E-9 T 14-10-2018 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 SMART SM00283 363 610 2.1E-91 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 144 159 4.4E-60 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 4.4E-60 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 488 4.4E-60 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 519 4.4E-60 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 538 567 4.4E-60 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 577 2.2E-56 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BD65_2047 f757dc964f00cb5f3479a8114fc7ceb4 647 Gene3D G3DSA:1.20.1440.210 135 245 4.3E-9 T 14-10-2018 BD65_2954 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 Gene3D G3DSA:2.40.50.140 1 67 8.1E-32 T 14-10-2018 BD65_2954 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 SUPERFAMILY SSF50249 3 68 9.14E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_2954 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 14-10-2018 IPR019844 Cold-shock conserved site BD65_2954 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 27 36 1.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_2954 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 6 21 1.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_2954 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 42 60 1.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_2954 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.6E-33 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_2954 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 SMART SM00357 5 69 6.9E-33 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_2954 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PIRSF PIRSF002599 1 69 5.6E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BD65_1397 ad9f3ec8cde9915f3d2e64f89048e6a6 274 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 266 1.2E-96 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BD65_1397 ad9f3ec8cde9915f3d2e64f89048e6a6 274 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 273 18.196 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BD65_1397 ad9f3ec8cde9915f3d2e64f89048e6a6 274 Pfam PF02673 Bacitracin resistance protein BacA 10 267 1.4E-84 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BD65_1714 278e8d3c713a21e739e577720cf87158 371 Pfam PF13458 Periplasmic binding protein 27 361 2.6E-63 T 14-10-2018 IPR028081 Leucine-binding protein domain BD65_1714 278e8d3c713a21e739e577720cf87158 371 Gene3D G3DSA:3.40.50.2300 28 347 1.5E-117 T 14-10-2018 BD65_1714 278e8d3c713a21e739e577720cf87158 371 SUPERFAMILY SSF53822 25 366 3.36E-90 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_1714 278e8d3c713a21e739e577720cf87158 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 1.9E-61 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BD65_1714 278e8d3c713a21e739e577720cf87158 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 1.9E-61 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BD65_1714 278e8d3c713a21e739e577720cf87158 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 1.9E-61 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BD65_1714 278e8d3c713a21e739e577720cf87158 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 1.9E-61 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BD65_1714 278e8d3c713a21e739e577720cf87158 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 1.9E-61 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BD65_1714 278e8d3c713a21e739e577720cf87158 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 1.9E-61 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BD65_1714 278e8d3c713a21e739e577720cf87158 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 1.9E-61 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BD65_1714 278e8d3c713a21e739e577720cf87158 371 Gene3D G3DSA:3.40.50.2300 145 273 1.5E-117 T 14-10-2018 BD65_2599 9494c01393d2aa0c496132d0fd112fd8 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.2E-37 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BD65_2599 9494c01393d2aa0c496132d0fd112fd8 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 5.2E-46 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BD65_2599 9494c01393d2aa0c496132d0fd112fd8 159 SUPERFAMILY SSF55083 1 154 3.79E-54 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BD65_2599 9494c01393d2aa0c496132d0fd112fd8 159 Gene3D G3DSA:3.30.70.560 1 159 4.3E-60 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BD65_2599 9494c01393d2aa0c496132d0fd112fd8 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 Pfam PF01926 50S ribosome-binding GTPase 218 308 2.2E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 SUPERFAMILY SSF116878 121 454 2.62E-51 T 14-10-2018 BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 5.8E-100 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 5.1E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 SUPERFAMILY SSF52540 72 372 9.56E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 Gene3D G3DSA:3.30.1360.120 1 121 8.8E-38 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 Gene3D G3DSA:3.40.50.300 217 382 5.2E-103 T 14-10-2018 BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 Gene3D G3DSA:1.20.120.430 122 454 5.2E-103 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.134 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 Pfam PF12631 MnmE helical domain 123 451 3.5E-60 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 BD65_2012 2d41a46406b3f087afb17a29ebd09efa 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 2.5E-34 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 BD65_2499 46d27e59a675bd6e581fc048024aa255 836 Gene3D G3DSA:2.60.20.10 109 206 5.8E-18 T 14-10-2018 BD65_2499 46d27e59a675bd6e581fc048024aa255 836 Gene3D G3DSA:2.60.20.10 6 108 5.3E-17 T 14-10-2018 BD65_2499 46d27e59a675bd6e581fc048024aa255 836 SUPERFAMILY SSF49695 23 95 2.29E-10 T 14-10-2018 IPR011024 Gamma-crystallin-like BD65_2499 46d27e59a675bd6e581fc048024aa255 836 Pfam PF00030 Beta/Gamma crystallin 70 127 1.3E-4 T 14-10-2018 IPR001064 Beta/gamma crystallin BD65_2499 46d27e59a675bd6e581fc048024aa255 836 SUPERFAMILY SSF49695 103 204 4.42E-10 T 14-10-2018 IPR011024 Gamma-crystallin-like BD65_2499 46d27e59a675bd6e581fc048024aa255 836 SUPERFAMILY SSF55729 735 833 7.44E-7 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2499 46d27e59a675bd6e581fc048024aa255 836 Gene3D G3DSA:3.40.630.30 709 836 5.9E-6 T 14-10-2018 BD65_839 d1d998b0f3db4c5e72b5020374e8e8ee 181 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 3.0E-33 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_839 d1d998b0f3db4c5e72b5020374e8e8ee 181 Gene3D G3DSA:1.20.120.1200 1 159 6.0E-48 T 14-10-2018 BD65_2922 f638900614783c3f58533f2cba6d47cb 92 SUPERFAMILY SSF46689 1 89 1.79E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2922 f638900614783c3f58533f2cba6d47cb 92 Pfam PF01527 Transposase 4 70 1.0E-16 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_2922 f638900614783c3f58533f2cba6d47cb 92 Gene3D G3DSA:1.10.10.60 7 88 1.0E-10 T 14-10-2018 BD65_1242 9d82ae6c7a944751c24f5c135290f126 222 SUPERFAMILY SSF46894 4 96 2.66E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_1242 9d82ae6c7a944751c24f5c135290f126 222 SMART SM00862 22 95 7.2E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_1242 9d82ae6c7a944751c24f5c135290f126 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 95 1.3E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_1242 9d82ae6c7a944751c24f5c135290f126 222 Gene3D G3DSA:1.10.10.10 1 110 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_395 b81ac996a348d43d8c3a5d0240d93db9 237 SUPERFAMILY SSF53187 20 214 2.38E-30 T 14-10-2018 BD65_395 b81ac996a348d43d8c3a5d0240d93db9 237 Pfam PF00246 Zinc carboxypeptidase 38 157 5.2E-11 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BD65_395 b81ac996a348d43d8c3a5d0240d93db9 237 Gene3D G3DSA:3.40.630.10 18 234 1.6E-51 T 14-10-2018 BD65_232 47777fe0726cc9438019fec402aa23f2 616 Gene3D G3DSA:3.90.226.10 317 539 5.1E-165 T 14-10-2018 BD65_232 47777fe0726cc9438019fec402aa23f2 616 PIRSF PIRSF001217 8 616 3.6E-214 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 BD65_232 47777fe0726cc9438019fec402aa23f2 616 SUPERFAMILY SSF52096 312 528 2.4E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_232 47777fe0726cc9438019fec402aa23f2 616 SUPERFAMILY SSF52096 35 286 1.45E-26 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_232 47777fe0726cc9438019fec402aa23f2 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 607 5.1E-222 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 BD65_232 47777fe0726cc9438019fec402aa23f2 616 Gene3D G3DSA:3.40.1750.10 187 496 5.1E-165 T 14-10-2018 BD65_232 47777fe0726cc9438019fec402aa23f2 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 539 8.3E-52 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 BD65_232 47777fe0726cc9438019fec402aa23f2 616 Pfam PF01343 Peptidase family S49 390 541 4.6E-48 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BD65_232 47777fe0726cc9438019fec402aa23f2 616 Pfam PF01343 Peptidase family S49 139 289 2.4E-36 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BD65_232 47777fe0726cc9438019fec402aa23f2 616 Gene3D G3DSA:3.90.226.10 95 316 5.1E-165 T 14-10-2018 BD65_1702 d47d5c27958f35a8f1b2f351f992c579 295 SUPERFAMILY SSF161098 56 283 1.44E-49 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1702 d47d5c27958f35a8f1b2f351f992c579 295 Gene3D G3DSA:1.10.3720.10 52 293 2.7E-57 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1702 d47d5c27958f35a8f1b2f351f992c579 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 293 7.9E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 Pfam PF01835 MG2 domain 372 463 1.1E-19 T 14-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 Gene3D G3DSA:1.50.10.20 1160 1423 7.0E-25 T 14-10-2018 BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 Gene3D G3DSA:2.60.40.1930 377 467 5.4E-7 T 14-10-2018 BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 SMART SM01359 743 891 3.0E-38 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 273 365 2.1E-21 T 14-10-2018 BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 SMART SM01360 956 1045 8.1E-19 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 Pfam PF00207 Alpha-2-macroglobulin family 963 1044 1.7E-7 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 PIRSF PIRSF038980 1 1642 0.0 T 14-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1170 1188 8.5E-5 T 14-10-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 SUPERFAMILY SSF48239 1164 1421 2.47E-37 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid BD65_1039 b30d70daa568ca9fe1f6e692cfa318ca 1642 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 744 890 9.5E-14 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 BD65_2532 21c36bd2faeada549d8f11f05711a4fd 535 Gene3D G3DSA:1.10.3720.10 11 267 1.2E-43 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2532 21c36bd2faeada549d8f11f05711a4fd 535 Gene3D G3DSA:1.10.3720.10 291 534 1.9E-25 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2532 21c36bd2faeada549d8f11f05711a4fd 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 250 3.3E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_2532 21c36bd2faeada549d8f11f05711a4fd 535 SUPERFAMILY SSF161098 11 264 1.12E-42 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2532 21c36bd2faeada549d8f11f05711a4fd 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 1.6E-239 T 14-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 BD65_2532 21c36bd2faeada549d8f11f05711a4fd 535 SUPERFAMILY SSF161098 286 527 3.92E-29 T 14-10-2018 IPR035906 MetI-like superfamily BD65_721 15d0b8313500bc6542187c37295f4370 232 PRINTS PR01837 MgtC/SapB protein signature 32 50 1.6E-45 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BD65_721 15d0b8313500bc6542187c37295f4370 232 PRINTS PR01837 MgtC/SapB protein signature 13 32 1.6E-45 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BD65_721 15d0b8313500bc6542187c37295f4370 232 PRINTS PR01837 MgtC/SapB protein signature 57 79 1.6E-45 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BD65_721 15d0b8313500bc6542187c37295f4370 232 PRINTS PR01837 MgtC/SapB protein signature 84 108 1.6E-45 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BD65_721 15d0b8313500bc6542187c37295f4370 232 Pfam PF02308 MgtC family 10 128 2.2E-36 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BD65_721 15d0b8313500bc6542187c37295f4370 232 Gene3D G3DSA:3.30.70.260 141 230 1.5E-13 T 14-10-2018 BD65_1224 77fafa63478bac25dc9c330c8f6aeacc 207 PIRSF PIRSF004525 16 207 3.9E-60 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted BD65_827 e661616441281887701e3f2db8b31707 455 ProSitePatterns PS00455 Putative AMP-binding domain signature. 141 152 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_827 e661616441281887701e3f2db8b31707 455 Gene3D G3DSA:3.40.50.12780 4 356 8.7E-64 T 14-10-2018 BD65_827 e661616441281887701e3f2db8b31707 455 SUPERFAMILY SSF56801 9 454 3.53E-88 T 14-10-2018 BD65_827 e661616441281887701e3f2db8b31707 455 Gene3D G3DSA:3.30.300.30 357 435 2.1E-12 T 14-10-2018 BD65_827 e661616441281887701e3f2db8b31707 455 Pfam PF13193 AMP-binding enzyme C-terminal domain 370 438 3.9E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BD65_827 e661616441281887701e3f2db8b31707 455 Pfam PF00501 AMP-binding enzyme 10 358 3.7E-48 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_827 e661616441281887701e3f2db8b31707 455 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 31 447 5.2E-111 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 BD65_1744 5dd02fb288bf3f84a2582e99a5255d00 316 SUPERFAMILY SSF143865 1 255 2.22E-36 T 14-10-2018 BD65_1744 5dd02fb288bf3f84a2582e99a5255d00 316 Pfam PF01544 CorA-like Mg2+ transporter protein 25 312 1.0E-52 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 BD65_1744 5dd02fb288bf3f84a2582e99a5255d00 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 5.7E-107 T 14-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 BD65_1744 5dd02fb288bf3f84a2582e99a5255d00 316 Gene3D G3DSA:1.20.58.340 240 316 6.6E-26 T 14-10-2018 BD65_1744 5dd02fb288bf3f84a2582e99a5255d00 316 SUPERFAMILY SSF144083 251 314 1.14E-20 T 14-10-2018 BD65_2846 990f2bb60143684899de97fe40518c9f 112 Gene3D G3DSA:3.30.70.120 1 112 7.1E-45 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BD65_2846 990f2bb60143684899de97fe40518c9f 112 SUPERFAMILY SSF54913 1 112 1.18E-42 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BD65_2846 990f2bb60143684899de97fe40518c9f 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_2846 990f2bb60143684899de97fe40518c9f 112 PRINTS PR00340 P-II protein signature 83 103 3.2E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_2846 990f2bb60143684899de97fe40518c9f 112 PRINTS PR00340 P-II protein signature 2 17 3.2E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_2846 990f2bb60143684899de97fe40518c9f 112 PRINTS PR00340 P-II protein signature 52 75 3.2E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_2846 990f2bb60143684899de97fe40518c9f 112 PRINTS PR00340 P-II protein signature 23 41 3.2E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_2846 990f2bb60143684899de97fe40518c9f 112 SMART SM00938 4 105 1.8E-61 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_2846 990f2bb60143684899de97fe40518c9f 112 PIRSF PIRSF039144 1 112 3.5E-53 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_2846 990f2bb60143684899de97fe40518c9f 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 BD65_2846 990f2bb60143684899de97fe40518c9f 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BD65_2076 88277eea5d724210526ddfa097bac929 300 SUPERFAMILY SSF161098 93 280 4.58E-29 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2076 88277eea5d724210526ddfa097bac929 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 1.7E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_2076 88277eea5d724210526ddfa097bac929 300 Gene3D G3DSA:1.10.3720.10 88 295 2.1E-23 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2076 88277eea5d724210526ddfa097bac929 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 2.8E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BD65_2573 fc456d1c816331bade5e90ad1d07879c 148 Gene3D G3DSA:3.30.700.10 7 145 7.8E-22 T 14-10-2018 BD65_2573 fc456d1c816331bade5e90ad1d07879c 148 SUPERFAMILY SSF54523 7 113 3.35E-19 T 14-10-2018 BD65_2573 fc456d1c816331bade5e90ad1d07879c 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.3E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_2573 fc456d1c816331bade5e90ad1d07879c 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 3.6E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_2573 fc456d1c816331bade5e90ad1d07879c 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_302 fa5385506114a00ea427c0c56327d2a7 389 SMART SM00028 69 102 64.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_302 fa5385506114a00ea427c0c56327d2a7 389 SMART SM00028 214 247 0.47 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_302 fa5385506114a00ea427c0c56327d2a7 389 SMART SM00028 180 213 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_302 fa5385506114a00ea427c0c56327d2a7 389 SMART SM00028 107 140 99.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_302 fa5385506114a00ea427c0c56327d2a7 389 SUPERFAMILY SSF48452 110 268 5.5E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_302 fa5385506114a00ea427c0c56327d2a7 389 SUPERFAMILY SSF48452 38 136 2.09E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_302 fa5385506114a00ea427c0c56327d2a7 389 Gene3D G3DSA:1.25.40.10 178 345 4.9E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_302 fa5385506114a00ea427c0c56327d2a7 389 Pfam PF13176 Tetratricopeptide repeat 71 97 0.028 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_302 fa5385506114a00ea427c0c56327d2a7 389 Gene3D G3DSA:1.25.40.10 24 177 2.9E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_302 fa5385506114a00ea427c0c56327d2a7 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.729 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 BD65_302 fa5385506114a00ea427c0c56327d2a7 389 Pfam PF13432 Tetratricopeptide repeat 187 243 0.0076 T 14-10-2018 BD65_452 0869f91afc82594772feab3d7d775fba 78 SUPERFAMILY SSF58042 24 73 7.72E-23 T 14-10-2018 BD65_452 0869f91afc82594772feab3d7d775fba 78 Gene3D G3DSA:1.20.5.190 22 77 2.9E-32 T 14-10-2018 BD65_452 0869f91afc82594772feab3d7d775fba 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 5.4E-25 T 14-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 BD65_452 0869f91afc82594772feab3d7d775fba 78 PIRSF PIRSF002855 1 78 8.2E-29 T 14-10-2018 IPR016367 Murein-lipoprotein BD65_657 a0dd0e33b1ff8e50e4569a8664e2eb52 488 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 151 176 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site BD65_657 a0dd0e33b1ff8e50e4569a8664e2eb52 488 Pfam PF00474 Sodium:solute symporter family 29 431 1.5E-138 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BD65_657 a0dd0e33b1ff8e50e4569a8664e2eb52 488 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 29 431 3.0E-124 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BD65_657 a0dd0e33b1ff8e50e4569a8664e2eb52 488 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 1 484 5.6E-223 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 BD65_657 a0dd0e33b1ff8e50e4569a8664e2eb52 488 Gene3D G3DSA:1.20.1730.10 16 487 3.6E-92 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily BD65_657 a0dd0e33b1ff8e50e4569a8664e2eb52 488 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 413 433 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site BD65_2199 a37adfc56374ac885ec82e9a3aba424b 119 SUPERFAMILY SSF75169 1 119 6.15E-37 T 14-10-2018 IPR027396 DsrEFH-like BD65_2199 a37adfc56374ac885ec82e9a3aba424b 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 36.138 T 14-10-2018 IPR037450 Sulphur relay, TusC BD65_2199 a37adfc56374ac885ec82e9a3aba424b 119 Gene3D G3DSA:3.40.1260.10 1 119 1.6E-39 T 14-10-2018 IPR027396 DsrEFH-like BD65_2199 a37adfc56374ac885ec82e9a3aba424b 119 Pfam PF02635 DsrE/DsrF-like family 2 119 2.1E-24 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein BD65_2199 a37adfc56374ac885ec82e9a3aba424b 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 119 4.2E-47 T 14-10-2018 IPR017462 Sulphur relay, TusC/DsrF BD65_1085 1719179b992be55e3d2944f8f27bad81 153 PIRSF PIRSF004923 1 151 4.2E-36 T 14-10-2018 IPR026268 Protein RseC BD65_1085 1719179b992be55e3d2944f8f27bad81 153 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 1.7E-33 T 14-10-2018 BD65_1054 45e16f50c8e05ead83660a1ea3018b6f 385 Pfam PF12832 MFS_1 like family 8 356 1.5E-45 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain BD65_1054 45e16f50c8e05ead83660a1ea3018b6f 385 Gene3D G3DSA:1.20.1250.20 187 376 5.5E-34 T 14-10-2018 BD65_1054 45e16f50c8e05ead83660a1ea3018b6f 385 PIRSF PIRSF004925 1 383 2.9E-111 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter BD65_1054 45e16f50c8e05ead83660a1ea3018b6f 385 SUPERFAMILY SSF103473 7 372 1.7E-34 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_1054 45e16f50c8e05ead83660a1ea3018b6f 385 Gene3D G3DSA:1.20.1250.20 4 183 1.8E-17 T 14-10-2018 BD65_1614 3d7c68c4c6749217cb162050295fc575 466 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 268 350 7.7E-14 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain BD65_1614 3d7c68c4c6749217cb162050295fc575 466 Pfam PF17482 Phage tail sheath C-terminal domain 355 461 4.7E-11 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain BD65_2589 a6a519550dc101358838effc34ca6736 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 14 113 8.0E-48 T 14-10-2018 BD65_2589 a6a519550dc101358838effc34ca6736 115 Gene3D G3DSA:1.20.58.1630 23 114 5.8E-10 T 14-10-2018 IPR038432 PulS/OutS-like superfamily BD65_2589 a6a519550dc101358838effc34ca6736 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 22 106 1.4E-9 T 14-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like BD65_1097 a565bce1e3a3ab78a3bcc4acc4c0a659 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.731 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BD65_1097 a565bce1e3a3ab78a3bcc4acc4c0a659 292 Gene3D G3DSA:3.40.50.10330 23 287 1.9E-100 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BD65_1097 a565bce1e3a3ab78a3bcc4acc4c0a659 292 Pfam PF01513 ATP-NAD kinase 8 271 2.4E-76 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BD65_1097 a565bce1e3a3ab78a3bcc4acc4c0a659 292 SUPERFAMILY SSF111331 8 289 9.03E-94 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BD65_1097 a565bce1e3a3ab78a3bcc4acc4c0a659 292 Gene3D G3DSA:2.60.200.30 128 264 1.9E-100 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BD65_341 e78753181464550b84995301e025eaec 269 SUPERFAMILY SSF53335 10 242 8.81E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_341 e78753181464550b84995301e025eaec 269 Gene3D G3DSA:3.40.50.150 7 259 7.1E-10 T 14-10-2018 BD65_341 e78753181464550b84995301e025eaec 269 Pfam PF04072 Leucine carboxyl methyltransferase 20 172 1.6E-9 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 BD65_595 c7fc46b0970e10ac35afecd12c7ee968 282 SMART SM00090 5 228 5.4E-14 T 14-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 BD65_595 c7fc46b0970e10ac35afecd12c7ee968 282 SUPERFAMILY SSF56112 18 223 4.08E-19 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BD65_595 c7fc46b0970e10ac35afecd12c7ee968 282 Gene3D G3DSA:1.10.510.10 144 221 7.3E-18 T 14-10-2018 BD65_595 c7fc46b0970e10ac35afecd12c7ee968 282 Pfam PF01163 RIO1 family 31 219 6.3E-42 T 14-10-2018 BD65_595 c7fc46b0970e10ac35afecd12c7ee968 282 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 14-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 BD65_595 c7fc46b0970e10ac35afecd12c7ee968 282 Gene3D G3DSA:3.30.200.20 16 126 4.6E-5 T 14-10-2018 BD65_2104 7da6d6ca641464a942701fb0ac364666 146 PIRSF PIRSF006276 1 141 4.9E-54 T 14-10-2018 IPR006015 Universal stress protein A BD65_2104 7da6d6ca641464a942701fb0ac364666 146 SUPERFAMILY SSF52402 3 139 7.12E-32 T 14-10-2018 BD65_2104 7da6d6ca641464a942701fb0ac364666 146 Gene3D G3DSA:3.40.50.620 2 142 2.5E-51 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2104 7da6d6ca641464a942701fb0ac364666 146 Pfam PF00582 Universal stress protein family 3 138 8.5E-21 T 14-10-2018 IPR006016 UspA BD65_120 56265810ce2263231b0b4bb82e32d580 479 Gene3D G3DSA:3.90.1150.10 98 464 6.3E-96 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_120 56265810ce2263231b0b4bb82e32d580 479 SUPERFAMILY SSF46785 1 70 1.24E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_120 56265810ce2263231b0b4bb82e32d580 479 SMART SM00345 7 66 7.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_120 56265810ce2263231b0b4bb82e32d580 479 Pfam PF00155 Aminotransferase class I and II 145 446 5.5E-29 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BD65_120 56265810ce2263231b0b4bb82e32d580 479 Gene3D G3DSA:3.40.640.10 141 359 6.3E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_120 56265810ce2263231b0b4bb82e32d580 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 4.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_120 56265810ce2263231b0b4bb82e32d580 479 SUPERFAMILY SSF53383 93 465 3.44E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_120 56265810ce2263231b0b4bb82e32d580 479 Gene3D G3DSA:1.10.10.10 1 97 6.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1283 02fb7dd875f67339b871c306feb133e7 198 SUPERFAMILY SSF100950 11 198 1.53E-57 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BD65_1283 02fb7dd875f67339b871c306feb133e7 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 5.5E-57 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BD65_1283 02fb7dd875f67339b871c306feb133e7 198 Gene3D G3DSA:3.40.50.10420 3 197 8.6E-60 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BD65_1283 02fb7dd875f67339b871c306feb133e7 198 PIRSF PIRSF006806 7 195 1.7E-41 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BD65_1283 02fb7dd875f67339b871c306feb133e7 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 192 7.9E-51 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BD65_2608 f7e139cdc08c2425dc14bac8e4e42457 474 Gene3D G3DSA:1.10.3080.10 31 472 9.4E-153 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 BD65_2608 f7e139cdc08c2425dc14bac8e4e42457 474 Pfam PF00654 Voltage gated chloride channel 89 437 9.8E-90 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_2608 f7e139cdc08c2425dc14bac8e4e42457 474 PRINTS PR00762 Chloride channel signature 352 372 3.4E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_2608 f7e139cdc08c2425dc14bac8e4e42457 474 PRINTS PR00762 Chloride channel signature 405 424 3.4E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_2608 f7e139cdc08c2425dc14bac8e4e42457 474 PRINTS PR00762 Chloride channel signature 102 119 3.4E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_2608 f7e139cdc08c2425dc14bac8e4e42457 474 PRINTS PR00762 Chloride channel signature 183 202 3.4E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_2608 f7e139cdc08c2425dc14bac8e4e42457 474 PRINTS PR00762 Chloride channel signature 387 403 3.4E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_2608 f7e139cdc08c2425dc14bac8e4e42457 474 SUPERFAMILY SSF81340 16 454 6.8E-110 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.9E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.9E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.9E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.517 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 SUPERFAMILY SSF47729 1 91 2.21E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.6E-29 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 8.7E-52 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 Gene3D G3DSA:4.10.520.10 40 94 1.3E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 Gene3D G3DSA:4.10.520.10 2 39 8.2E-17 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BD65_3245 82d4e309a05d739cdf88872b4fa18f61 94 SMART SM00411 1 91 1.1E-41 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_1345 35d5ac87e200de842adf768e87b9d099 347 SUPERFAMILY SSF81345 18 342 6.93E-70 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_1345 35d5ac87e200de842adf768e87b9d099 347 Pfam PF01032 FecCD transport family 36 342 1.6E-80 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BD65_1345 35d5ac87e200de842adf768e87b9d099 347 Gene3D G3DSA:1.10.3470.10 22 346 1.6E-86 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_888 7b0c5abe4c0653c96344c3692dd4aef1 345 PIRSF PIRSF020588 1 344 5.1E-145 T 14-10-2018 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 Gene3D G3DSA:3.40.190.10 31 337 6.0E-140 T 14-10-2018 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 SUPERFAMILY SSF53850 28 368 1.67E-102 T 14-10-2018 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 1.0E-73 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 1.0E-73 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 1.0E-73 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 1.0E-73 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 1.0E-73 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 1.0E-73 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 1.0E-73 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 1.0E-73 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 1.0E-73 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 1.0E-73 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 Pfam PF13416 Bacterial extracellular solute-binding protein 46 334 1.1E-32 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 PIRSF PIRSF019574 1 369 1.7E-141 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BD65_3197 7b71d23bdf898255cc882e9ef614c88a 369 Gene3D G3DSA:3.40.190.10 135 363 6.0E-140 T 14-10-2018 BD65_2100 4d5fdb1d84a6dcdb30f9d2d40f230040 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.922 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 BD65_2100 4d5fdb1d84a6dcdb30f9d2d40f230040 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_2100 4d5fdb1d84a6dcdb30f9d2d40f230040 280 Gene3D G3DSA:3.40.50.150 1 280 7.8E-120 T 14-10-2018 BD65_2100 4d5fdb1d84a6dcdb30f9d2d40f230040 280 SUPERFAMILY SSF53335 9 279 5.82E-100 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2100 4d5fdb1d84a6dcdb30f9d2d40f230040 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 1.9E-113 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 BD65_509 5e59fe887e35da356d70476f0052abbc 287 PIRSF PIRSF006221 1 287 7.6E-92 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 BD65_509 5e59fe887e35da356d70476f0052abbc 287 Gene3D G3DSA:3.30.200.20 1 92 2.4E-20 T 14-10-2018 BD65_509 5e59fe887e35da356d70476f0052abbc 287 Gene3D G3DSA:3.90.1200.10 98 286 1.2E-59 T 14-10-2018 BD65_509 5e59fe887e35da356d70476f0052abbc 287 Pfam PF03881 Fructosamine kinase 1 285 6.5E-118 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 BD65_509 5e59fe887e35da356d70476f0052abbc 287 SUPERFAMILY SSF56112 3 280 3.7E-41 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BD65_1623 23ed387d53f6587da8ba83d3e9fb7d7c 435 Gene3D G3DSA:3.20.20.60 1 418 3.5E-188 T 14-10-2018 BD65_1623 23ed387d53f6587da8ba83d3e9fb7d7c 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 BD65_1623 23ed387d53f6587da8ba83d3e9fb7d7c 435 PIRSF PIRSF001362 1 435 8.6E-226 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BD65_1623 23ed387d53f6587da8ba83d3e9fb7d7c 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 256 7.8E-116 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BD65_1623 23ed387d53f6587da8ba83d3e9fb7d7c 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 1.4E-90 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BD65_1623 23ed387d53f6587da8ba83d3e9fb7d7c 435 SUPERFAMILY SSF51621 6 418 5.38E-155 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BD65_1623 23ed387d53f6587da8ba83d3e9fb7d7c 435 Pfam PF00463 Isocitrate lyase family 9 256 2.0E-62 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BD65_1623 23ed387d53f6587da8ba83d3e9fb7d7c 435 Pfam PF00463 Isocitrate lyase family 257 435 6.2E-50 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BD65_1151 eeff839225dff275e454d03d805a4dcc 372 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 136 208 9.8E-12 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BD65_1151 eeff839225dff275e454d03d805a4dcc 372 Pfam PF00588 SpoU rRNA Methylase family 225 362 3.9E-32 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BD65_1151 eeff839225dff275e454d03d805a4dcc 372 SMART SM00967 135 210 9.2E-9 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BD65_1151 eeff839225dff275e454d03d805a4dcc 372 SUPERFAMILY SSF75217 216 369 2.29E-40 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BD65_1151 eeff839225dff275e454d03d805a4dcc 372 PIRSF PIRSF006280 1 371 1.3E-179 T 14-10-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 BD65_1151 eeff839225dff275e454d03d805a4dcc 372 Gene3D G3DSA:3.40.1280.10 202 372 6.4E-41 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BD65_1151 eeff839225dff275e454d03d805a4dcc 372 SUPERFAMILY SSF55315 128 205 1.77E-9 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like BD65_2541 cb4db2ec1261988af49d857f7f797251 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_2541 cb4db2ec1261988af49d857f7f797251 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 74 4.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_2541 cb4db2ec1261988af49d857f7f797251 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 63 4.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_2541 cb4db2ec1261988af49d857f7f797251 318 SUPERFAMILY SSF46785 22 101 4.08E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2541 cb4db2ec1261988af49d857f7f797251 318 Gene3D G3DSA:1.10.10.10 17 105 2.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2541 cb4db2ec1261988af49d857f7f797251 318 Gene3D G3DSA:3.40.190.10 112 310 7.7E-37 T 14-10-2018 BD65_2541 cb4db2ec1261988af49d857f7f797251 318 Gene3D G3DSA:3.40.190.10 189 286 7.7E-37 T 14-10-2018 BD65_2541 cb4db2ec1261988af49d857f7f797251 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 83 7.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_2541 cb4db2ec1261988af49d857f7f797251 318 SUPERFAMILY SSF53850 108 313 2.71E-37 T 14-10-2018 BD65_2541 cb4db2ec1261988af49d857f7f797251 318 Pfam PF03466 LysR substrate binding domain 119 311 5.4E-19 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_974 3c1e0660bf05987a7424707fcadd6d60 92 Gene3D G3DSA:1.10.10.10 2 92 2.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_974 3c1e0660bf05987a7424707fcadd6d60 92 Pfam PF09904 Winged helix-turn helix 3 90 1.8E-37 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 BD65_974 3c1e0660bf05987a7424707fcadd6d60 92 PIRSF PIRSF037266 1 92 3.8E-39 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 BD65_256 4de6b0788f859fc4ba9ca7c76f4efc94 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 326 1.4E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_256 4de6b0788f859fc4ba9ca7c76f4efc94 333 Gene3D G3DSA:3.40.50.300 13 330 3.0E-96 T 14-10-2018 BD65_256 4de6b0788f859fc4ba9ca7c76f4efc94 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 308 5.6E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BD65_256 4de6b0788f859fc4ba9ca7c76f4efc94 333 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_256 4de6b0788f859fc4ba9ca7c76f4efc94 333 SMART SM00382 44 250 9.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_256 4de6b0788f859fc4ba9ca7c76f4efc94 333 Pfam PF00005 ABC transporter 36 192 2.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_256 4de6b0788f859fc4ba9ca7c76f4efc94 333 SUPERFAMILY SSF52540 45 310 1.11E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_194 42636b0e3c2e04dd7899905b0b47f1e1 144 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 144 32.263 T 14-10-2018 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 BD65_194 42636b0e3c2e04dd7899905b0b47f1e1 144 SUPERFAMILY SSF103481 6 107 5.89E-17 T 14-10-2018 BD65_194 42636b0e3c2e04dd7899905b0b47f1e1 144 Gene3D G3DSA:1.10.3730.20 1 109 4.3E-29 T 14-10-2018 BD65_194 42636b0e3c2e04dd7899905b0b47f1e1 144 Pfam PF00893 Small Multidrug Resistance protein 3 93 8.0E-23 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BD65_2090 258254d5df09236b6aa3d0b832b415d6 496 SUPERFAMILY SSF63411 29 240 5.24E-27 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BD65_2090 258254d5df09236b6aa3d0b832b415d6 496 Pfam PF00675 Insulinase (Peptidase family M16) 51 159 4.9E-11 T 14-10-2018 IPR011765 Peptidase M16, N-terminal BD65_2090 258254d5df09236b6aa3d0b832b415d6 496 Pfam PF05193 Peptidase M16 inactive domain 202 377 1.5E-14 T 14-10-2018 IPR007863 Peptidase M16, C-terminal BD65_2090 258254d5df09236b6aa3d0b832b415d6 496 Gene3D G3DSA:3.30.830.10 257 472 3.9E-101 T 14-10-2018 BD65_2090 258254d5df09236b6aa3d0b832b415d6 496 Gene3D G3DSA:3.30.830.10 8 256 2.0E-51 T 14-10-2018 BD65_2090 258254d5df09236b6aa3d0b832b415d6 496 SUPERFAMILY SSF63411 342 460 2.44E-5 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BD65_422 9c752cda4765e50b6755a5adb48cc4bd 87 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 1 87 2.0E-23 T 14-10-2018 IPR020317 Uncharacterised protein family YjbD BD65_422 9c752cda4765e50b6755a5adb48cc4bd 87 Pfam PF11656 YjbD family (DUF3811) 1 87 3.1E-36 T 14-10-2018 IPR020317 Uncharacterised protein family YjbD BD65_684 c5a6b5fbfe7ecb90b5eaf3308e818e51 138 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 57 127 1.1E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) BD65_684 c5a6b5fbfe7ecb90b5eaf3308e818e51 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 103 3.7E-30 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BD65_684 c5a6b5fbfe7ecb90b5eaf3308e818e51 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 118 3.7E-30 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BD65_684 c5a6b5fbfe7ecb90b5eaf3308e818e51 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 57 73 3.7E-30 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BD65_684 c5a6b5fbfe7ecb90b5eaf3308e818e51 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 74 90 3.7E-30 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BD65_684 c5a6b5fbfe7ecb90b5eaf3308e818e51 138 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 50 1.0E-24 T 14-10-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal BD65_684 c5a6b5fbfe7ecb90b5eaf3308e818e51 138 Gene3D G3DSA:2.30.330.10 44 138 8.1E-35 T 14-10-2018 IPR036429 SpoA-like superfamily BD65_684 c5a6b5fbfe7ecb90b5eaf3308e818e51 138 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 55 129 2.7E-33 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 BD65_684 c5a6b5fbfe7ecb90b5eaf3308e818e51 138 SUPERFAMILY SSF101801 55 136 1.44E-26 T 14-10-2018 IPR036429 SpoA-like superfamily BD65_1782 082fe97b8d4caa1ae2ecbc1d6834a6cb 497 SUPERFAMILY SSF53067 7 128 1.88E-38 T 14-10-2018 BD65_1782 082fe97b8d4caa1ae2ecbc1d6834a6cb 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 53.5 T 14-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 BD65_1782 082fe97b8d4caa1ae2ecbc1d6834a6cb 497 PIRSF PIRSF001267 1 496 2.9E-182 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 BD65_1782 082fe97b8d4caa1ae2ecbc1d6834a6cb 497 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 300 5.3E-94 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 BD65_1782 082fe97b8d4caa1ae2ecbc1d6834a6cb 497 Gene3D G3DSA:3.30.420.150 112 289 3.9E-88 T 14-10-2018 BD65_1782 082fe97b8d4caa1ae2ecbc1d6834a6cb 497 Gene3D G3DSA:1.10.3210.10 305 497 1.6E-47 T 14-10-2018 BD65_1782 082fe97b8d4caa1ae2ecbc1d6834a6cb 497 SUPERFAMILY SSF53067 132 300 1.73E-42 T 14-10-2018 BD65_1782 082fe97b8d4caa1ae2ecbc1d6834a6cb 497 SUPERFAMILY SSF109604 307 494 3.3E-45 T 14-10-2018 BD65_1782 082fe97b8d4caa1ae2ecbc1d6834a6cb 497 Gene3D G3DSA:3.30.420.40 9 297 3.9E-88 T 14-10-2018 BD65_1782 082fe97b8d4caa1ae2ecbc1d6834a6cb 497 Pfam PF02541 Ppx/GppA phosphatase family 21 301 2.5E-97 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 BD65_687 692411015387da432772f735675931a8 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.8E-30 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BD65_687 692411015387da432772f735675931a8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.3E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BD65_687 692411015387da432772f735675931a8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.3E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BD65_687 692411015387da432772f735675931a8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.3E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BD65_687 692411015387da432772f735675931a8 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 7.0E-33 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 BD65_687 692411015387da432772f735675931a8 89 PIRSF PIRSF004669 1 89 1.6E-32 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BD65_1172 2daaf1073616806bbd0a1a0ff92a5d10 86 Gene3D G3DSA:2.30.30.400 10 86 7.7E-32 T 14-10-2018 IPR038626 Rof-like superfamily BD65_1172 2daaf1073616806bbd0a1a0ff92a5d10 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 5.0E-27 T 14-10-2018 IPR009778 Modulator of Rho-dependent transcription termination BD65_1172 2daaf1073616806bbd0a1a0ff92a5d10 86 SUPERFAMILY SSF101744 1 84 3.3E-29 T 14-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 BD65_1687 b8cc49b57710b7c8e8e0195424abc873 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 8.9E-178 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 BD65_1687 b8cc49b57710b7c8e8e0195424abc873 544 Pfam PF03109 ABC1 family 113 230 4.3E-35 T 14-10-2018 IPR004147 UbiB domain BD65_1687 b8cc49b57710b7c8e8e0195424abc873 544 SUPERFAMILY SSF56112 94 435 1.16E-46 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BD65_1687 b8cc49b57710b7c8e8e0195424abc873 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.355 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 BD65_625 1a05c619aadd5ad32cc05c9b47d3be6e 218 SUPERFAMILY SSF81324 116 210 4.32E-14 T 14-10-2018 BD65_625 1a05c619aadd5ad32cc05c9b47d3be6e 218 Pfam PF07885 Ion channel 159 207 5.9E-9 T 14-10-2018 IPR013099 Potassium channel domain BD65_625 1a05c619aadd5ad32cc05c9b47d3be6e 218 Gene3D G3DSA:1.10.287.70 110 218 1.4E-13 T 14-10-2018 BD65_332 e5034f5c738d54d0630f3d3c400d9adb 320 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 9.1E-139 T 14-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 BD65_332 e5034f5c738d54d0630f3d3c400d9adb 320 Gene3D G3DSA:3.50.14.10 14 281 5.0E-113 T 14-10-2018 IPR036381 Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 BD65_332 e5034f5c738d54d0630f3d3c400d9adb 320 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 2.1E-158 T 14-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 BD65_332 e5034f5c738d54d0630f3d3c400d9adb 320 SUPERFAMILY SSF56596 6 308 9.68E-117 T 14-10-2018 IPR036384 Replication terminator Tus superfamily GO:0003677|GO:0005737|GO:0006274 BD65_332 e5034f5c738d54d0630f3d3c400d9adb 320 Gene3D G3DSA:3.30.54.10 174 306 5.0E-113 T 14-10-2018 BD65_332 e5034f5c738d54d0630f3d3c400d9adb 320 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 43.913 T 14-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 BD65_1792 c55e0ff954c6fb766ab7685ec5eca0d9 548 Gene3D G3DSA:3.40.50.1220 182 350 2.6E-54 T 14-10-2018 BD65_1792 c55e0ff954c6fb766ab7685ec5eca0d9 548 SUPERFAMILY SSF52518 1 176 1.49E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_1792 c55e0ff954c6fb766ab7685ec5eca0d9 548 SUPERFAMILY SSF52467 187 343 8.51E-57 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BD65_1792 c55e0ff954c6fb766ab7685ec5eca0d9 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 1.5E-214 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BD65_1792 c55e0ff954c6fb766ab7685ec5eca0d9 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 6.2E-48 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BD65_1792 c55e0ff954c6fb766ab7685ec5eca0d9 548 SUPERFAMILY SSF52518 357 546 1.97E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BD65_1792 c55e0ff954c6fb766ab7685ec5eca0d9 548 Gene3D G3DSA:3.40.50.970 351 547 3.5E-64 T 14-10-2018 BD65_1792 c55e0ff954c6fb766ab7685ec5eca0d9 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 1.5E-42 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BD65_1792 c55e0ff954c6fb766ab7685ec5eca0d9 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 164 4.7E-57 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BD65_1792 c55e0ff954c6fb766ab7685ec5eca0d9 548 Gene3D G3DSA:3.40.50.970 1 170 1.2E-68 T 14-10-2018 BD65_2061 2d6c205aaaca6030f65660e80a3b7334 72 Pfam PF01527 Transposase 2 72 1.5E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_2061 2d6c205aaaca6030f65660e80a3b7334 72 SUPERFAMILY SSF46689 1 72 2.33E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2061 2d6c205aaaca6030f65660e80a3b7334 72 Gene3D G3DSA:1.10.10.60 7 72 1.0E-7 T 14-10-2018 BD65_1746 923f486c2d0340078c86e5a48d326f50 276 Gene3D G3DSA:3.20.20.70 1 252 6.5E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1746 923f486c2d0340078c86e5a48d326f50 276 SUPERFAMILY SSF51621 4 197 1.0E-84 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BD65_1746 923f486c2d0340078c86e5a48d326f50 276 PIRSF PIRSF034452 1 276 1.1E-162 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like BD65_1746 923f486c2d0340078c86e5a48d326f50 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 8 274 1.3E-133 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like BD65_2955 c2e8c0fac8db073cdb74b97af653a8b6 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 123 18.932 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BD65_2955 c2e8c0fac8db073cdb74b97af653a8b6 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 8.1E-25 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BD65_2955 c2e8c0fac8db073cdb74b97af653a8b6 128 TIGRFAM TIGR00494 crcB: protein CrcB 7 121 1.9E-37 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BD65_1768 1522d352a1a67fa92823a5a99421ccf8 457 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 447 38.673 T 14-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 BD65_1768 1522d352a1a67fa92823a5a99421ccf8 457 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 440 8.9E-260 T 14-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 BD65_2080 aeac642ad677f6e4e1f504e1f2f90e05 62 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 1 61 3.1E-16 T 14-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT BD65_2080 aeac642ad677f6e4e1f504e1f2f90e05 62 Pfam PF11120 Cellulose biosynthesis protein BcsF 1 57 1.4E-25 T 14-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT BD65_2080 aeac642ad677f6e4e1f504e1f2f90e05 62 ProDom PD053231 YHJT MEMBRANE INNER BCSF 1 62 1.0E-4 T 14-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT BD65_485 02cd1a6d9ee69a1b464e77dc4d6f772a 205 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 126 196 1.9E-10 T 14-10-2018 IPR006522 Phage virion morphogensis protein BD65_485 02cd1a6d9ee69a1b464e77dc4d6f772a 205 Pfam PF05069 Phage virion morphogenesis family 115 199 2.9E-14 T 14-10-2018 IPR006522 Phage virion morphogensis protein BD65_485 02cd1a6d9ee69a1b464e77dc4d6f772a 205 Pfam PF05069 Phage virion morphogenesis family 4 65 4.8E-10 T 14-10-2018 IPR006522 Phage virion morphogensis protein BD65_2010 759e3d33f6d5861962306ad68a0338ec 160 Pfam PF13683 Integrase core domain 85 150 1.3E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_2010 759e3d33f6d5861962306ad68a0338ec 160 SUPERFAMILY SSF53098 20 154 1.16E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2010 759e3d33f6d5861962306ad68a0338ec 160 Gene3D G3DSA:3.30.420.10 11 158 8.9E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2322 065d1be7110e254a4942368615f405aa 68 Gene3D G3DSA:3.30.1910.10 1 64 4.2E-26 T 14-10-2018 BD65_2322 065d1be7110e254a4942368615f405aa 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.1E-28 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 BD65_2322 065d1be7110e254a4942368615f405aa 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 2.0E-28 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 BD65_523 653b83aea5ad486642331551c9be766c 876 Pfam PF02470 MlaD protein 745 806 2.9E-8 T 14-10-2018 IPR003399 Mce/MlaD BD65_523 653b83aea5ad486642331551c9be766c 876 Pfam PF02470 MlaD protein 280 348 1.2E-7 T 14-10-2018 IPR003399 Mce/MlaD BD65_523 653b83aea5ad486642331551c9be766c 876 Pfam PF02470 MlaD protein 633 722 3.3E-9 T 14-10-2018 IPR003399 Mce/MlaD BD65_523 653b83aea5ad486642331551c9be766c 876 Pfam PF02470 MlaD protein 394 455 2.7E-6 T 14-10-2018 IPR003399 Mce/MlaD BD65_523 653b83aea5ad486642331551c9be766c 876 Pfam PF02470 MlaD protein 46 137 4.3E-16 T 14-10-2018 IPR003399 Mce/MlaD BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 SUPERFAMILY SSF54211 3 203 6.45E-64 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 Pfam PF10509 Galactokinase galactose-binding signature 11 57 5.1E-21 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 PIRSF PIRSF000530 1 383 8.3E-121 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 Gene3D G3DSA:3.30.70.890 202 356 1.7E-129 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 TIGRFAM TIGR00131 gal_kin: galactokinase 5 383 6.3E-154 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 SUPERFAMILY SSF55060 205 382 1.43E-52 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 Pfam PF08544 GHMP kinases C terminal 279 361 5.0E-11 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 Pfam PF00288 GHMP kinases N terminal domain 114 181 6.5E-15 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 Gene3D G3DSA:3.30.230.10 23 201 1.7E-129 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 PRINTS PR00959 Mevalonate kinase family signature 25 49 1.5E-45 T 14-10-2018 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 PRINTS PR00959 Mevalonate kinase family signature 328 345 1.5E-45 T 14-10-2018 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 PRINTS PR00959 Mevalonate kinase family signature 162 181 1.5E-45 T 14-10-2018 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 PRINTS PR00959 Mevalonate kinase family signature 119 141 1.5E-45 T 14-10-2018 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 Hamap MF_00246 Galactokinase [galK]. 25 382 42.704 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 PRINTS PR00473 Galactokinase signature 92 103 7.7E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 PRINTS PR00473 Galactokinase signature 263 277 7.7E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 PRINTS PR00473 Galactokinase signature 27 45 7.7E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BD65_3058 1fc7ca15c3d97934651d69e6213a5ab7 383 PRINTS PR00473 Galactokinase signature 112 130 7.7E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BD65_2630 c67af963b99fc4199805d9037f6f1273 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.632 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BD65_2630 c67af963b99fc4199805d9037f6f1273 302 Gene3D G3DSA:3.40.50.620 7 212 1.3E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2630 c67af963b99fc4199805d9037f6f1273 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.7E-166 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BD65_2630 c67af963b99fc4199805d9037f6f1273 302 SUPERFAMILY SSF52402 6 209 1.23E-74 T 14-10-2018 BD65_2630 c67af963b99fc4199805d9037f6f1273 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 2.6E-65 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 BD65_2630 c67af963b99fc4199805d9037f6f1273 302 PIRSF PIRSF002936 1 302 5.2E-155 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BD65_2940 cf1bbc3303076edae6334f59d8733e3a 115 SUPERFAMILY SSF52091 1 107 2.16E-21 T 14-10-2018 IPR036513 STAS domain superfamily BD65_2940 cf1bbc3303076edae6334f59d8733e3a 115 Pfam PF01740 STAS domain 3 99 1.5E-12 T 14-10-2018 IPR002645 STAS domain BD65_2940 cf1bbc3303076edae6334f59d8733e3a 115 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 101 2.4E-17 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 BD65_2940 cf1bbc3303076edae6334f59d8733e3a 115 Gene3D G3DSA:3.30.750.24 1 115 5.0E-28 T 14-10-2018 IPR036513 STAS domain superfamily BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.1E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.1E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.1E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.1E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.1E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.1E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.1E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 Pfam PF01578 Cytochrome C assembly protein 89 296 1.4E-54 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BD65_908 078e3ce182b3807c52a720392f875cce 655 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 3.8E-131 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 3.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_908 078e3ce182b3807c52a720392f875cce 655 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 2.3E-283 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_2320 262ea3230476aaa7a7053ab921d0ea9b 185 Gene3D G3DSA:3.40.30.10 40 182 7.7E-6 T 14-10-2018 BD65_2320 262ea3230476aaa7a7053ab921d0ea9b 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 181 1.1E-76 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ BD65_2320 262ea3230476aaa7a7053ab921d0ea9b 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 2.8E-85 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ BD65_918 b577caa4e8a1735007a8531a9c15636b 146 SUPERFAMILY SSF143100 4 63 1.96E-6 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like BD65_918 b577caa4e8a1735007a8531a9c15636b 146 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 3 83 9.9E-36 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system BD65_918 b577caa4e8a1735007a8531a9c15636b 146 Gene3D G3DSA:3.30.160.250 1 87 3.0E-6 T 14-10-2018 BD65_1249 e290adf2aa207772c42850478e58bae2 149 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 139 9.7E-52 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 BD65_1249 e290adf2aa207772c42850478e58bae2 149 Gene3D G3DSA:3.30.700.10 24 139 1.5E-33 T 14-10-2018 BD65_1249 e290adf2aa207772c42850478e58bae2 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 1.5E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_1249 e290adf2aa207772c42850478e58bae2 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 29 7.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BD65_1249 e290adf2aa207772c42850478e58bae2 149 SUPERFAMILY SSF54523 38 141 8.89E-35 T 14-10-2018 BD65_1249 e290adf2aa207772c42850478e58bae2 149 Pfam PF08334 Type II secretion system (T2SS), protein G 33 139 3.3E-31 T 14-10-2018 IPR013545 Type II secretion system protein G BD65_1249 e290adf2aa207772c42850478e58bae2 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 3.5E-21 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BD65_1249 e290adf2aa207772c42850478e58bae2 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 3.5E-21 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BD65_2431 83a7279f9152743044c55ec80d37c112 309 Pfam PF16946 OMPG-porin 1 family 124 308 7.0E-9 T 14-10-2018 IPR031605 Putative OMPG-porin 1 family BD65_1115 b147a5ba27542e394f449dae557f43b6 217 Pfam PF13356 Arm DNA-binding domain 8 95 2.9E-14 T 14-10-2018 IPR025166 Integrase, DNA-binding domain BD65_1115 b147a5ba27542e394f449dae557f43b6 217 Gene3D G3DSA:1.10.150.130 97 211 2.5E-29 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BD65_1115 b147a5ba27542e394f449dae557f43b6 217 Gene3D G3DSA:3.30.160.390 7 95 5.6E-24 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily BD65_1115 b147a5ba27542e394f449dae557f43b6 217 SUPERFAMILY SSF56349 105 205 2.35E-13 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_1290 c765b12c7b19e86b870bfc8319757051 359 PIRSF PIRSF001359 13 359 8.6E-103 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BD65_1290 c765b12c7b19e86b870bfc8319757051 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BD65_1290 c765b12c7b19e86b870bfc8319757051 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BD65_1290 c765b12c7b19e86b870bfc8319757051 359 SUPERFAMILY SSF51569 4 357 5.71E-132 T 14-10-2018 BD65_1290 c765b12c7b19e86b870bfc8319757051 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 1.1E-189 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 BD65_1290 c765b12c7b19e86b870bfc8319757051 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 1.6E-114 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BD65_1290 c765b12c7b19e86b870bfc8319757051 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 2.9E-89 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BD65_1290 c765b12c7b19e86b870bfc8319757051 359 Gene3D G3DSA:3.20.20.70 2 359 1.0E-153 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_470 9c5f48c49451b1113acc9c141dd61cf7 334 Gene3D G3DSA:1.10.3470.10 6 333 8.3E-126 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_470 9c5f48c49451b1113acc9c141dd61cf7 334 SUPERFAMILY SSF81345 8 327 2.22E-89 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_470 9c5f48c49451b1113acc9c141dd61cf7 334 Pfam PF01032 FecCD transport family 17 327 8.8E-97 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BD65_183 133921352bdbcfae1fd9990beb5f7972 334 SUPERFAMILY SSF52540 23 255 5.25E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_183 133921352bdbcfae1fd9990beb5f7972 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 334 4.0E-40 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BD65_183 133921352bdbcfae1fd9990beb5f7972 334 SUPERFAMILY SSF46785 260 331 2.78E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_183 133921352bdbcfae1fd9990beb5f7972 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 329 4.0E-149 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BD65_183 133921352bdbcfae1fd9990beb5f7972 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 5.9E-34 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BD65_183 133921352bdbcfae1fd9990beb5f7972 334 Gene3D G3DSA:1.10.10.10 260 334 2.9E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_183 133921352bdbcfae1fd9990beb5f7972 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 184.655 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BD65_183 133921352bdbcfae1fd9990beb5f7972 334 Gene3D G3DSA:1.10.8.60 185 258 1.7E-29 T 14-10-2018 BD65_183 133921352bdbcfae1fd9990beb5f7972 334 Gene3D G3DSA:3.40.50.300 21 184 4.6E-40 T 14-10-2018 BD65_183 133921352bdbcfae1fd9990beb5f7972 334 SMART SM00382 54 181 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_183 133921352bdbcfae1fd9990beb5f7972 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 5.7E-117 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 BD65_886 d25802840ec28d3690eaf7f491c09c49 677 Pfam PF11412 Disulphide bond corrector protein DsbC 44 146 1.3E-17 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BD65_886 d25802840ec28d3690eaf7f491c09c49 677 Pfam PF13899 Thioredoxin-like 563 649 5.2E-15 T 14-10-2018 BD65_886 d25802840ec28d3690eaf7f491c09c49 677 Gene3D G3DSA:3.40.30.10 552 659 1.5E-12 T 14-10-2018 BD65_886 d25802840ec28d3690eaf7f491c09c49 677 SUPERFAMILY SSF52833 554 671 1.56E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_886 d25802840ec28d3690eaf7f491c09c49 677 ProSitePatterns PS00194 Thioredoxin family active site. 582 600 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BD65_2227 253ea66be557a472c24c57e4dfc767d0 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 4.6E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P BD65_2227 253ea66be557a472c24c57e4dfc767d0 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.12 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 BD65_2227 253ea66be557a472c24c57e4dfc767d0 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2227 253ea66be557a472c24c57e4dfc767d0 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 2.0E-51 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2227 253ea66be557a472c24c57e4dfc767d0 144 Gene3D G3DSA:3.100.10.10 70 144 7.8E-12 T 14-10-2018 BD65_2227 253ea66be557a472c24c57e4dfc767d0 144 SUPERFAMILY SSF52080 4 143 1.44E-46 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily BD65_2437 5f2cef450803cb59d705b16bc802bb5b 388 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 386 2.7E-161 T 14-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 BD65_2437 5f2cef450803cb59d705b16bc802bb5b 388 SUPERFAMILY SSF53697 19 377 1.87E-53 T 14-10-2018 BD65_2437 5f2cef450803cb59d705b16bc802bb5b 388 Gene3D G3DSA:3.40.50.10490 4 202 5.1E-52 T 14-10-2018 BD65_2437 5f2cef450803cb59d705b16bc802bb5b 388 Pfam PF01380 SIS domain 54 191 8.4E-11 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_2437 5f2cef450803cb59d705b16bc802bb5b 388 Pfam PF01380 SIS domain 227 356 4.2E-13 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_2437 5f2cef450803cb59d705b16bc802bb5b 388 Gene3D G3DSA:3.40.50.10490 203 380 3.7E-64 T 14-10-2018 BD65_636 6a9bb8ae1c00f2b2e36ad8822426f34f 349 Pfam PF00005 ABC transporter 19 163 7.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_636 6a9bb8ae1c00f2b2e36ad8822426f34f 349 SUPERFAMILY SSF50331 256 340 6.72E-5 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BD65_636 6a9bb8ae1c00f2b2e36ad8822426f34f 349 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_636 6a9bb8ae1c00f2b2e36ad8822426f34f 349 Gene3D G3DSA:3.40.50.300 2 252 1.4E-67 T 14-10-2018 BD65_636 6a9bb8ae1c00f2b2e36ad8822426f34f 349 SMART SM00382 28 213 1.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_636 6a9bb8ae1c00f2b2e36ad8822426f34f 349 SUPERFAMILY SSF52540 4 239 2.23E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 153 340 4.08E-50 T 14-10-2018 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 Pfam PF06723 MreB/Mbl protein 11 338 9.8E-150 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 14-10-2018 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 158 321 6.2E-130 T 14-10-2018 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.1E-170 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 14 331 6.2E-130 T 14-10-2018 BD65_1548 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.90.640.10 190 263 6.2E-130 T 14-10-2018 BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 SMART SM00235 71 240 2.2E-28 T 14-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 SUPERFAMILY SSF51120 257 474 2.75E-44 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 Pfam PF08548 Peptidase M10 serralysin C terminal 256 477 7.2E-87 T 14-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 174 229 8.3E-6 T 14-10-2018 BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 PIRSF PIRSF001205 1 477 3.1E-234 T 14-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 Gene3D G3DSA:2.150.10.10 261 468 1.7E-191 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 364 382 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 PRINTS PR00313 NodO calcium binding signature 368 376 3.6E-10 T 14-10-2018 BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 PRINTS PR00313 NodO calcium binding signature 377 386 3.6E-10 T 14-10-2018 BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 PRINTS PR00313 NodO calcium binding signature 359 367 3.6E-10 T 14-10-2018 BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 PRINTS PR00313 NodO calcium binding signature 338 349 3.6E-10 T 14-10-2018 BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 Gene3D G3DSA:3.40.390.10 33 260 1.7E-191 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BD65_101 d1b50006cd57e0eb77cc1aa563d8d5aa 477 SUPERFAMILY SSF55486 20 254 6.63E-80 T 14-10-2018 BD65_885 c844f46e8b21198c1b68681fe65c22dd 238 Pfam PF13462 Thioredoxin 76 230 1.9E-22 T 14-10-2018 IPR012336 Thioredoxin-like fold BD65_885 c844f46e8b21198c1b68681fe65c22dd 238 Gene3D G3DSA:3.40.30.10 67 237 1.2E-41 T 14-10-2018 BD65_885 c844f46e8b21198c1b68681fe65c22dd 238 SUPERFAMILY SSF52833 66 230 5.28E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_885 c844f46e8b21198c1b68681fe65c22dd 238 ProSitePatterns PS00194 Thioredoxin family active site. 90 108 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BD65_709 d35770d1fcb750f0d5d4321a83894533 129 SMART SM00448 6 120 1.6E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_709 d35770d1fcb750f0d5d4321a83894533 129 SUPERFAMILY SSF52172 5 125 1.29E-36 T 14-10-2018 IPR011006 CheY-like superfamily BD65_709 d35770d1fcb750f0d5d4321a83894533 129 Pfam PF00072 Response regulator receiver domain 9 120 1.1E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_709 d35770d1fcb750f0d5d4321a83894533 129 Gene3D G3DSA:3.40.50.2300 2 129 1.3E-38 T 14-10-2018 BD65_2904 0705749502995c5d00639fdbc4cd93bc 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 127.191 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 BD65_2904 0705749502995c5d00639fdbc4cd93bc 240 Gene3D G3DSA:3.60.21.10 1 229 4.8E-19 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BD65_2904 0705749502995c5d00639fdbc4cd93bc 240 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 204 5.5E-11 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 BD65_2904 0705749502995c5d00639fdbc4cd93bc 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 229 4.3E-104 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 BD65_2904 0705749502995c5d00639fdbc4cd93bc 240 SUPERFAMILY SSF56300 1 229 7.97E-32 T 14-10-2018 BD65_2125 f7f051b89ecac5c3db3f3fcd118d5230 109 SUPERFAMILY SSF52821 2 101 9.3E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_2125 f7f051b89ecac5c3db3f3fcd118d5230 109 Gene3D G3DSA:3.40.250.10 1 108 7.9E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_2125 f7f051b89ecac5c3db3f3fcd118d5230 109 SMART SM00450 7 102 1.1E-18 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_2125 f7f051b89ecac5c3db3f3fcd118d5230 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.648 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 BD65_2125 f7f051b89ecac5c3db3f3fcd118d5230 109 Pfam PF00581 Rhodanese-like domain 17 98 2.9E-14 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_3249 a9a072c7eaf261b006dbb568f92b23bd 472 Gene3D G3DSA:3.10.180.80 4 451 7.1E-191 T 14-10-2018 BD65_3249 a9a072c7eaf261b006dbb568f92b23bd 472 SMART SM01150 13 414 3.0E-221 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 BD65_3249 a9a072c7eaf261b006dbb568f92b23bd 472 Pfam PF07063 Domain of unknown function (DUF1338) 11 414 1.5E-117 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 BD65_2027 b38b0a859d7226327e95a0db9096c19b 417 Gene3D G3DSA:3.40.640.10 1 416 2.5E-145 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_2027 b38b0a859d7226327e95a0db9096c19b 417 Pfam PF00155 Aminotransferase class I and II 66 373 4.0E-23 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BD65_2027 b38b0a859d7226327e95a0db9096c19b 417 SUPERFAMILY SSF53383 24 412 7.43E-61 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_2221 d5f1a0fbc9131b6a6da04c78991a55a5 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.9E-26 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2221 d5f1a0fbc9131b6a6da04c78991a55a5 101 SUPERFAMILY SSF57716 2 101 1.35E-36 T 14-10-2018 BD65_2221 d5f1a0fbc9131b6a6da04c78991a55a5 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2221 d5f1a0fbc9131b6a6da04c78991a55a5 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.808 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid BD65_2221 d5f1a0fbc9131b6a6da04c78991a55a5 101 Gene3D G3DSA:4.10.830.10 41 101 3.0E-23 T 14-10-2018 BD65_910 f516f25f7975ac1dd2dd812bb04daabe 70 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 1.1E-16 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 BD65_910 f516f25f7975ac1dd2dd812bb04daabe 70 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 3.1E-17 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 33.045 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 Gene3D G3DSA:1.10.10.350 367 470 1.7E-24 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.9E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 4.9E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.9E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.9E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 4.9E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 SUPERFAMILY SSF48163 299 461 1.15E-45 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 462 2.0E-201 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 3.8E-116 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 Gene3D G3DSA:3.40.50.620 1 313 8.9E-136 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_936 6ed1bd75e027eb30d89c37446fb6ba99 471 SUPERFAMILY SSF52374 3 298 9.12E-114 T 14-10-2018 BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 SUPERFAMILY SSF52540 129 375 1.98E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 1.5E-19 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 SMART SM00490 517 601 4.9E-15 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 Gene3D G3DSA:3.30.360.80 713 786 8.3E-32 T 14-10-2018 BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 SMART SM00487 150 342 3.3E-22 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 Pfam PF00271 Helicase conserved C-terminal domain 492 601 5.4E-14 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 SUPERFAMILY SSF52540 273 645 1.74E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 Gene3D G3DSA:2.30.30.930 55 114 2.7E-28 T 14-10-2018 BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 Gene3D G3DSA:3.40.50.300 429 633 1.5E-47 T 14-10-2018 BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 8.2E-155 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 29.042 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 Gene3D G3DSA:2.30.30.140 1 53 1.7E-23 T 14-10-2018 BD65_2528 41162dd6d77efdc6f78615cd562769cd 968 Gene3D G3DSA:3.40.50.10810 150 428 2.4E-109 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily BD65_581 ff5667fcdfb8676b0c9cc7e6dfc8cd98 69 PRINTS PR00050 Cold shock protein signature 27 36 5.5E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_581 ff5667fcdfb8676b0c9cc7e6dfc8cd98 69 PRINTS PR00050 Cold shock protein signature 42 60 5.5E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_581 ff5667fcdfb8676b0c9cc7e6dfc8cd98 69 PRINTS PR00050 Cold shock protein signature 6 21 5.5E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_581 ff5667fcdfb8676b0c9cc7e6dfc8cd98 69 SMART SM00357 5 69 1.6E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_581 ff5667fcdfb8676b0c9cc7e6dfc8cd98 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 14-10-2018 IPR019844 Cold-shock conserved site BD65_581 ff5667fcdfb8676b0c9cc7e6dfc8cd98 69 Gene3D G3DSA:2.40.50.140 1 69 5.0E-32 T 14-10-2018 BD65_581 ff5667fcdfb8676b0c9cc7e6dfc8cd98 69 PIRSF PIRSF002599 1 69 1.5E-25 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BD65_581 ff5667fcdfb8676b0c9cc7e6dfc8cd98 69 SUPERFAMILY SSF50249 3 68 4.46E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_581 ff5667fcdfb8676b0c9cc7e6dfc8cd98 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.3E-33 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_239 8aaed7e0b8a51dd9d97e09628f8ed45b 158 Pfam PF00959 Phage lysozyme 33 148 1.1E-12 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 BD65_239 8aaed7e0b8a51dd9d97e09628f8ed45b 158 SUPERFAMILY SSF53955 5 155 1.13E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_239 8aaed7e0b8a51dd9d97e09628f8ed45b 158 Gene3D G3DSA:1.10.530.40 4 157 7.2E-42 T 14-10-2018 BD65_1503 56d335f33d1ae4171942952642c64dca 84 Pfam PF01722 BolA-like protein 21 74 4.5E-14 T 14-10-2018 IPR002634 BolA protein BD65_1503 56d335f33d1ae4171942952642c64dca 84 PIRSF PIRSF003113 1 83 6.2E-22 T 14-10-2018 IPR002634 BolA protein BD65_1503 56d335f33d1ae4171942952642c64dca 84 Gene3D G3DSA:3.30.300.90 1 84 3.6E-36 T 14-10-2018 BD65_1503 56d335f33d1ae4171942952642c64dca 84 SUPERFAMILY SSF82657 2 82 1.15E-28 T 14-10-2018 IPR036065 BolA-like superfamily BD65_405 cc7d6993cd1df88fc8f662152b630f82 75 Pfam PF06667 Phage shock protein B 4 74 1.3E-33 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 BD65_405 cc7d6993cd1df88fc8f662152b630f82 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 9.4E-35 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 BD65_2610 4949a8782e4e29d000f42e230f1db889 202 Pfam PF03458 UPF0126 domain 4 78 5.6E-23 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 BD65_2610 4949a8782e4e29d000f42e230f1db889 202 Pfam PF03458 UPF0126 domain 92 162 2.7E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 ProSitePatterns PS00543 HlyD family secretion proteins signature. 401 423 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 Gene3D G3DSA:2.40.50.100 56 89 2.1E-6 T 14-10-2018 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 Gene3D G3DSA:2.40.50.100 285 325 3.1E-11 T 14-10-2018 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 Pfam PF13437 HlyD family secretion protein 289 392 2.4E-13 T 14-10-2018 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 Gene3D G3DSA:2.40.30.170 326 414 3.1E-11 T 14-10-2018 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 Pfam PF13533 Biotin-lipoyl like 65 103 2.7E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 Gene3D G3DSA:1.10.287.470 226 284 3.1E-11 T 14-10-2018 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 Gene3D G3DSA:1.10.287.470 90 104 2.1E-6 T 14-10-2018 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 26 49 1.1E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 416 436 1.1E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 334 358 1.1E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 358 381 1.1E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 401 416 1.1E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 301 322 1.1E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 1.1E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BD65_1818 cb97cfeaa806c6c5ef57eaa4c9f0852f 437 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 20 437 2.9E-105 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 8.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 8.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 8.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 Gene3D G3DSA:3.40.50.12740 2 206 8.1E-59 T 14-10-2018 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 Pfam PF00072 Response regulator receiver domain 4 116 1.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 SMART SM00421 143 200 2.8E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 SMART SM00448 2 115 3.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 SUPERFAMILY SSF46894 130 206 5.78E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 1.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_745 390421b218cdfcd09d4adf50d80a2464 209 SUPERFAMILY SSF52172 1 124 3.98E-30 T 14-10-2018 IPR011006 CheY-like superfamily BD65_1349 6ac7b783ff6a49e71349227bf7f7c60a 74 Pfam PF03621 MbtH-like protein 8 57 9.2E-24 T 14-10-2018 IPR005153 MbtH-like domain BD65_1349 6ac7b783ff6a49e71349227bf7f7c60a 74 SUPERFAMILY SSF160582 7 72 8.63E-27 T 14-10-2018 IPR038020 MbtH-like domain superfamily BD65_1349 6ac7b783ff6a49e71349227bf7f7c60a 74 SMART SM00923 8 58 1.7E-25 T 14-10-2018 IPR005153 MbtH-like domain BD65_1349 6ac7b783ff6a49e71349227bf7f7c60a 74 Gene3D G3DSA:3.90.820.10 3 74 4.3E-30 T 14-10-2018 BD65_169 609572aba8fb7c3c6f5f14733f8ccf80 1464 SMART SM00912 49 165 1.0E-25 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_169 609572aba8fb7c3c6f5f14733f8ccf80 1464 Gene3D G3DSA:2.160.20.10 32 272 1.6E-52 T 14-10-2018 IPR012334 Pectin lyase fold BD65_169 609572aba8fb7c3c6f5f14733f8ccf80 1464 Pfam PF13332 Haemagluttinin repeat 380 529 3.3E-5 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_169 609572aba8fb7c3c6f5f14733f8ccf80 1464 Pfam PF13332 Haemagluttinin repeat 619 760 6.8E-9 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_169 609572aba8fb7c3c6f5f14733f8ccf80 1464 Pfam PF13332 Haemagluttinin repeat 1205 1366 4.5E-13 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_169 609572aba8fb7c3c6f5f14733f8ccf80 1464 Pfam PF13332 Haemagluttinin repeat 795 881 0.0042 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_169 609572aba8fb7c3c6f5f14733f8ccf80 1464 Pfam PF13332 Haemagluttinin repeat 1023 1152 4.7E-5 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_169 609572aba8fb7c3c6f5f14733f8ccf80 1464 SUPERFAMILY SSF51126 41 372 5.96E-29 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor BD65_169 609572aba8fb7c3c6f5f14733f8ccf80 1464 Pfam PF05860 haemagglutination activity domain 36 146 7.2E-20 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_169 609572aba8fb7c3c6f5f14733f8ccf80 1464 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 67 145 1.1E-11 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_198 db932cae5c522f9e0588ad679ed76d6a 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.3E-69 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 BD65_198 db932cae5c522f9e0588ad679ed76d6a 232 Gene3D G3DSA:3.30.420.40 96 190 4.0E-85 T 14-10-2018 BD65_198 db932cae5c522f9e0588ad679ed76d6a 232 Gene3D G3DSA:3.30.420.40 5 224 4.0E-85 T 14-10-2018 BD65_198 db932cae5c522f9e0588ad679ed76d6a 232 SUPERFAMILY SSF53067 5 107 4.75E-30 T 14-10-2018 BD65_198 db932cae5c522f9e0588ad679ed76d6a 232 Pfam PF00814 Glycoprotease family 30 150 1.8E-29 T 14-10-2018 IPR000905 Gcp-like domain BD65_198 db932cae5c522f9e0588ad679ed76d6a 232 SUPERFAMILY SSF53067 110 219 2.2E-29 T 14-10-2018 BD65_1026 25aabb5c2fb7c70a421e0e8d20a37ad8 464 Pfam PF02601 Exonuclease VII, large subunit 126 440 4.9E-100 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 BD65_1026 25aabb5c2fb7c70a421e0e8d20a37ad8 464 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.116 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BD65_1026 25aabb5c2fb7c70a421e0e8d20a37ad8 464 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 355 3.6E-135 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BD65_1026 25aabb5c2fb7c70a421e0e8d20a37ad8 464 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.4E-31 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 BD65_2386 b8421689b70d6c79714b27af49af7c4b 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BD65_2386 b8421689b70d6c79714b27af49af7c4b 712 Pfam PF03477 ATP cone domain 4 89 1.3E-19 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BD65_2386 b8421689b70d6c79714b27af49af7c4b 712 Gene3D G3DSA:3.20.70.20 121 687 3.8E-231 T 14-10-2018 BD65_2386 b8421689b70d6c79714b27af49af7c4b 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 3.3E-204 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 BD65_2386 b8421689b70d6c79714b27af49af7c4b 712 SUPERFAMILY SSF51998 121 687 2.38E-192 T 14-10-2018 BD65_2386 b8421689b70d6c79714b27af49af7c4b 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 4.0E-180 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 BD65_747 8c9c4a4ecce3f0fbc235531866e40ab9 444 Pfam PF07690 Major Facilitator Superfamily 32 392 2.0E-51 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_747 8c9c4a4ecce3f0fbc235531866e40ab9 444 Gene3D G3DSA:1.20.1250.20 15 219 8.0E-51 T 14-10-2018 BD65_747 8c9c4a4ecce3f0fbc235531866e40ab9 444 PIRSF PIRSF002808 4 439 9.4E-126 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 BD65_747 8c9c4a4ecce3f0fbc235531866e40ab9 444 Gene3D G3DSA:1.20.1250.20 236 430 3.6E-38 T 14-10-2018 BD65_747 8c9c4a4ecce3f0fbc235531866e40ab9 444 SUPERFAMILY SSF103473 13 426 4.71E-76 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_2860 328294f09df08671e4a3c7777975978c 126 Pfam PF04304 Protein of unknown function (DUF454) 4 116 1.3E-40 T 14-10-2018 IPR007401 Protein of unknown function DUF454 BD65_2860 328294f09df08671e4a3c7777975978c 126 PIRSF PIRSF016789 2 123 9.7E-48 T 14-10-2018 IPR007401 Protein of unknown function DUF454 BD65_3039 013342aaee36bf164bd36dbf9ec5d17e 94 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 14 91 4.4E-30 T 14-10-2018 IPR011846 Cyd operon protein YbgE BD65_3039 013342aaee36bf164bd36dbf9ec5d17e 94 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 3 93 3.6E-39 T 14-10-2018 IPR011846 Cyd operon protein YbgE BD65_1463 0edee28b6fbcaa13124a43b904757fa0 415 SUPERFAMILY SSF118215 17 399 1.96E-94 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BD65_1463 0edee28b6fbcaa13124a43b904757fa0 415 Pfam PF00375 Sodium:dicarboxylate symporter family 17 396 1.6E-61 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BD65_1463 0edee28b6fbcaa13124a43b904757fa0 415 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 6.4E-15 T 14-10-2018 BD65_1463 0edee28b6fbcaa13124a43b904757fa0 415 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 6.4E-15 T 14-10-2018 BD65_1463 0edee28b6fbcaa13124a43b904757fa0 415 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 6.4E-15 T 14-10-2018 BD65_1463 0edee28b6fbcaa13124a43b904757fa0 415 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 6.4E-15 T 14-10-2018 BD65_1463 0edee28b6fbcaa13124a43b904757fa0 415 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 6.4E-15 T 14-10-2018 BD65_1463 0edee28b6fbcaa13124a43b904757fa0 415 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 6.4E-15 T 14-10-2018 BD65_1463 0edee28b6fbcaa13124a43b904757fa0 415 Gene3D G3DSA:1.10.3860.10 9 404 2.0E-68 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BD65_1463 0edee28b6fbcaa13124a43b904757fa0 415 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.578 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 BD65_2884 d085edaa9f4b5a0680dbe7e5778d58dd 407 Pfam PF00534 Glycosyl transferases group 1 216 375 2.5E-7 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BD65_2884 d085edaa9f4b5a0680dbe7e5778d58dd 407 SUPERFAMILY SSF53756 2 393 3.39E-29 T 14-10-2018 BD65_2884 d085edaa9f4b5a0680dbe7e5778d58dd 407 Gene3D G3DSA:3.40.50.2000 196 383 2.4E-26 T 14-10-2018 BD65_2884 d085edaa9f4b5a0680dbe7e5778d58dd 407 Gene3D G3DSA:3.40.50.2000 20 393 2.4E-26 T 14-10-2018 BD65_961 f0e81c4256f68ed94092befdab7aac48 195 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 16 190 3.0E-65 T 14-10-2018 IPR010938 Protein of unknown function DUF1131 BD65_961 f0e81c4256f68ed94092befdab7aac48 195 Gene3D G3DSA:2.60.460.10 26 191 8.7E-67 T 14-10-2018 IPR038714 YfeY-like superfamily BD65_961 f0e81c4256f68ed94092befdab7aac48 195 Pfam PF06572 Protein of unknown function (DUF1131) 22 190 2.5E-82 T 14-10-2018 IPR010938 Protein of unknown function DUF1131 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.7E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.7E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.7E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.7E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.7E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 2.5E-62 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 PIRSF PIRSF006160 1 162 1.8E-66 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 Gene3D G3DSA:3.30.1360.80 1 171 8.0E-73 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 SUPERFAMILY SSF63411 4 162 2.84E-67 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 8.0E-76 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_2720 fe4538622b2bc9de4784e2788bdecfae 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.616 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BD65_303 c2aa4b6e2629fec26f1bd3113d273d6b 101 Gene3D G3DSA:1.10.1220.10 1 46 1.8E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BD65_303 c2aa4b6e2629fec26f1bd3113d273d6b 101 SUPERFAMILY SSF47598 2 43 3.11E-8 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BD65_1820 fd3c6a72737a600a38a27411eb859ccd 200 SUPERFAMILY SSF54621 3 172 1.07E-46 T 14-10-2018 IPR036912 Haem-binding HasA superfamily BD65_1820 fd3c6a72737a600a38a27411eb859ccd 200 Pfam PF06438 Heme-binding protein A (HasA) 1 200 4.3E-67 T 14-10-2018 IPR010495 Haem-binding HasA BD65_1820 fd3c6a72737a600a38a27411eb859ccd 200 Gene3D G3DSA:3.30.1500.10 1 188 6.0E-71 T 14-10-2018 IPR036912 Haem-binding HasA superfamily BD65_1912 e0dd7715f5dadf9708046f68cc3eaa8d 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.12 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 BD65_1912 e0dd7715f5dadf9708046f68cc3eaa8d 398 Gene3D G3DSA:3.90.1150.10 38 388 1.4E-136 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1912 e0dd7715f5dadf9708046f68cc3eaa8d 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 4.5E-216 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 BD65_1912 e0dd7715f5dadf9708046f68cc3eaa8d 398 Pfam PF00155 Aminotransferase class I and II 43 386 4.6E-74 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BD65_1912 e0dd7715f5dadf9708046f68cc3eaa8d 398 Gene3D G3DSA:3.40.640.10 58 296 1.4E-136 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_1912 e0dd7715f5dadf9708046f68cc3eaa8d 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 BD65_1912 e0dd7715f5dadf9708046f68cc3eaa8d 398 SUPERFAMILY SSF53383 5 396 6.72E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_2674 ec819ff284d21e28eeeb89afad7a2909 218 Pfam PF00813 FliP family 11 208 6.4E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_2674 ec819ff284d21e28eeeb89afad7a2909 218 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 189 201 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_2674 ec819ff284d21e28eeeb89afad7a2909 218 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 141 156 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_2674 ec819ff284d21e28eeeb89afad7a2909 218 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 7 208 7.2E-81 T 14-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 BD65_2674 ec819ff284d21e28eeeb89afad7a2909 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 8 27 4.6E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_2674 ec819ff284d21e28eeeb89afad7a2909 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 141 161 4.6E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_2674 ec819ff284d21e28eeeb89afad7a2909 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 162 183 4.6E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_2674 ec819ff284d21e28eeeb89afad7a2909 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 27 47 4.6E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_2674 ec819ff284d21e28eeeb89afad7a2909 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 47 66 4.6E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_2674 ec819ff284d21e28eeeb89afad7a2909 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 186 211 4.6E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_1865 cff5d9d2bd5a448b591b7d7d553c4e08 446 Pfam PF12571 Phage tail-collar fibre protein 1 150 2.0E-62 T 14-10-2018 IPR022225 Phage tail fibre protein BD65_1865 cff5d9d2bd5a448b591b7d7d553c4e08 446 Gene3D G3DSA:3.90.1340.10 304 356 1.1E-24 T 14-10-2018 IPR037053 Phage tail collar domain superfamily BD65_1865 cff5d9d2bd5a448b591b7d7d553c4e08 446 Pfam PF07484 Phage Tail Collar Domain 308 355 6.8E-14 T 14-10-2018 IPR011083 Phage tail collar domain BD65_1865 cff5d9d2bd5a448b591b7d7d553c4e08 446 SUPERFAMILY SSF88874 303 445 1.29E-39 T 14-10-2018 BD65_3140 1457715021592be1ceea56ce9055125f 388 Pfam PF04235 Protein of unknown function (DUF418) 216 374 5.5E-48 T 14-10-2018 IPR007349 Domain of unknown function DUF418 BD65_717 b0b5e3f65f36aebf31f7595b6908aeb4 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 239 3.8E-11 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BD65_717 b0b5e3f65f36aebf31f7595b6908aeb4 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 1.8E-118 T 14-10-2018 IPR022522 Flagellar motor stator, MotA BD65_717 b0b5e3f65f36aebf31f7595b6908aeb4 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site BD65_735 6f3432c6d556ec13a121b395ae363d09 244 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 129 216 2.9E-12 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BD65_735 6f3432c6d556ec13a121b395ae363d09 244 PRINTS PR01399 Enterobactin synthetase component D signature 172 188 5.0E-16 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 BD65_735 6f3432c6d556ec13a121b395ae363d09 244 PRINTS PR01399 Enterobactin synthetase component D signature 60 80 5.0E-16 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 BD65_735 6f3432c6d556ec13a121b395ae363d09 244 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 5.0E-16 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 BD65_735 6f3432c6d556ec13a121b395ae363d09 244 SUPERFAMILY SSF56214 129 222 2.35E-15 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BD65_735 6f3432c6d556ec13a121b395ae363d09 244 Gene3D G3DSA:3.90.470.20 56 147 1.6E-6 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 Gene3D G3DSA:3.10.350.10 405 454 5.8E-13 T 14-10-2018 IPR036779 LysM domain superfamily BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 SMART SM00257 354 398 2.8E-13 T 14-10-2018 IPR018392 LysM domain BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 SMART SM00257 407 452 4.0E-7 T 14-10-2018 IPR018392 LysM domain BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 131 159 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 SUPERFAMILY SSF54106 353 397 2.09E-10 T 14-10-2018 BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 Pfam PF01476 LysM domain 408 450 2.4E-9 T 14-10-2018 IPR018392 LysM domain BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 Pfam PF01476 LysM domain 355 396 3.0E-13 T 14-10-2018 IPR018392 LysM domain BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 Pfam PF01464 Transglycosylase SLT domain 117 224 7.7E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 SUPERFAMILY SSF54106 406 452 2.49E-9 T 14-10-2018 BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 SUPERFAMILY SSF53955 109 261 2.81E-41 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 Gene3D G3DSA:1.10.530.10 107 266 5.8E-33 T 14-10-2018 BD65_2748 ea3eb0eb42efbb48019566809a87802e 461 Gene3D G3DSA:3.10.350.10 350 404 6.9E-15 T 14-10-2018 IPR036779 LysM domain superfamily BD65_1542 e97c8092daf2dc5688bc0652658e0139 286 Gene3D G3DSA:3.60.110.10 4 271 2.6E-85 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BD65_1542 e97c8092daf2dc5688bc0652658e0139 286 Pfam PF00795 Carbon-nitrogen hydrolase 6 259 6.5E-50 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BD65_1542 e97c8092daf2dc5688bc0652658e0139 286 SUPERFAMILY SSF56317 2 267 1.7E-73 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BD65_388 3e1f727fc2e5c099814f4bb8b90b4258 90 Pfam PF03891 Domain of unknown function (DUF333) 39 86 7.5E-26 T 14-10-2018 IPR005590 Protein of unknown function DUF333 BD65_2579 3bb9020f3217f1558598f92a6f45c9c8 254 SMART SM00895 99 227 2.6E-18 T 14-10-2018 IPR011711 GntR, C-terminal BD65_2579 3bb9020f3217f1558598f92a6f45c9c8 254 Gene3D G3DSA:1.20.120.530 97 236 9.2E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BD65_2579 3bb9020f3217f1558598f92a6f45c9c8 254 Gene3D G3DSA:1.10.10.10 1 75 3.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2579 3bb9020f3217f1558598f92a6f45c9c8 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.5E-25 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_2579 3bb9020f3217f1558598f92a6f45c9c8 254 SMART SM00345 15 74 2.3E-29 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_2579 3bb9020f3217f1558598f92a6f45c9c8 254 SUPERFAMILY SSF48008 95 235 8.11E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BD65_2579 3bb9020f3217f1558598f92a6f45c9c8 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_2579 3bb9020f3217f1558598f92a6f45c9c8 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_2579 3bb9020f3217f1558598f92a6f45c9c8 254 SUPERFAMILY SSF46785 5 77 1.44E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2579 3bb9020f3217f1558598f92a6f45c9c8 254 Pfam PF07729 FCD domain 99 226 2.1E-18 T 14-10-2018 IPR011711 GntR, C-terminal BD65_2290 48863425a0f19ce6739e042db6acd755 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 132 1.6E-41 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BD65_2290 48863425a0f19ce6739e042db6acd755 156 Gene3D G3DSA:3.40.50.300 1 153 5.2E-47 T 14-10-2018 BD65_2290 48863425a0f19ce6739e042db6acd755 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 7.8E-53 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BD65_2290 48863425a0f19ce6739e042db6acd755 156 SUPERFAMILY SSF52540 29 133 5.82E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_223 9fd72dd129a58f9263b61e122e0d9227 644 Gene3D G3DSA:3.40.50.300 74 153 1.1E-5 T 14-10-2018 BD65_223 9fd72dd129a58f9263b61e122e0d9227 644 PIRSF PIRSF000549 1 644 2.0E-286 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 BD65_223 9fd72dd129a58f9263b61e122e0d9227 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 4.8E-73 T 14-10-2018 IPR010650 PrkA C-terminal domain BD65_223 9fd72dd129a58f9263b61e122e0d9227 644 SMART SM00763 19 380 1.5E-215 T 14-10-2018 IPR013153 PrkA AAA domain BD65_223 9fd72dd129a58f9263b61e122e0d9227 644 Pfam PF08298 PrkA AAA domain 20 380 1.2E-176 T 14-10-2018 IPR013153 PrkA AAA domain BD65_223 9fd72dd129a58f9263b61e122e0d9227 644 Gene3D G3DSA:3.40.50.300 216 355 3.6E-5 T 14-10-2018 BD65_223 9fd72dd129a58f9263b61e122e0d9227 644 SUPERFAMILY SSF52540 75 368 1.41E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1102 3d929a700058b41cfa44a140a5323d32 160 Pfam PF01668 SmpB protein 14 157 3.3E-58 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 BD65_1102 3d929a700058b41cfa44a140a5323d32 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 132 2.0E-61 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 BD65_1102 3d929a700058b41cfa44a140a5323d32 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 73.98 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 BD65_1102 3d929a700058b41cfa44a140a5323d32 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site BD65_1102 3d929a700058b41cfa44a140a5323d32 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.7E-54 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 BD65_1102 3d929a700058b41cfa44a140a5323d32 160 SUPERFAMILY SSF74982 8 138 8.5E-51 T 14-10-2018 IPR023620 Small protein B BD65_1102 3d929a700058b41cfa44a140a5323d32 160 Gene3D G3DSA:2.40.280.10 7 134 5.0E-47 T 14-10-2018 IPR023620 Small protein B BD65_1259 9fdb41075193e5ad2f7e64c3c1ef3ae4 262 SUPERFAMILY SSF52540 6 234 3.33E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1259 9fdb41075193e5ad2f7e64c3c1ef3ae4 262 Pfam PF00005 ABC transporter 24 172 9.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1259 9fdb41075193e5ad2f7e64c3c1ef3ae4 262 Gene3D G3DSA:3.40.50.300 4 260 4.5E-63 T 14-10-2018 BD65_1259 9fdb41075193e5ad2f7e64c3c1ef3ae4 262 SMART SM00382 31 220 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2072 4268e7bae5879b11e36ac0b81a01dab4 445 SUPERFAMILY SSF103473 17 440 1.96E-80 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_2072 4268e7bae5879b11e36ac0b81a01dab4 445 Pfam PF07690 Major Facilitator Superfamily 36 396 5.5E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2072 4268e7bae5879b11e36ac0b81a01dab4 445 Gene3D G3DSA:1.20.1250.20 19 223 3.5E-50 T 14-10-2018 BD65_2072 4268e7bae5879b11e36ac0b81a01dab4 445 Gene3D G3DSA:1.20.1250.20 237 438 1.8E-46 T 14-10-2018 BD65_2072 4268e7bae5879b11e36ac0b81a01dab4 445 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 1.5E-142 T 14-10-2018 BD65_2072 4268e7bae5879b11e36ac0b81a01dab4 445 PIRSF PIRSF002808 6 444 1.2E-142 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 BD65_1067 7daa7174c606a01c55ca381a83d60158 329 Pfam PF13942 YfhG lipoprotein 67 240 5.0E-79 T 14-10-2018 IPR025262 Quorum-sensing regulator protein G BD65_1067 7daa7174c606a01c55ca381a83d60158 329 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 32 242 8.0E-92 T 14-10-2018 BD65_2340 b4d07792a08835ae2447456bd35e7059 390 Gene3D G3DSA:3.40.50.300 159 338 1.1E-52 T 14-10-2018 BD65_2340 b4d07792a08835ae2447456bd35e7059 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 7.7E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_2340 b4d07792a08835ae2447456bd35e7059 390 SUPERFAMILY SSF52540 151 338 1.39E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2340 b4d07792a08835ae2447456bd35e7059 390 SUPERFAMILY SSF82051 2 157 8.11E-58 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily BD65_2340 b4d07792a08835ae2447456bd35e7059 390 Pfam PF01018 GTP1/OBG 4 156 1.9E-59 T 14-10-2018 IPR006169 GTP1/OBG domain BD65_2340 b4d07792a08835ae2447456bd35e7059 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 6.5E-148 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BD65_2340 b4d07792a08835ae2447456bd35e7059 390 Gene3D G3DSA:2.70.210.12 1 158 5.8E-63 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily BD65_2340 b4d07792a08835ae2447456bd35e7059 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.6E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_2340 b4d07792a08835ae2447456bd35e7059 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.6E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_2340 b4d07792a08835ae2447456bd35e7059 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.6E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_2340 b4d07792a08835ae2447456bd35e7059 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.6E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_2340 b4d07792a08835ae2447456bd35e7059 390 PIRSF PIRSF002401 1 377 6.6E-141 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type BD65_2340 b4d07792a08835ae2447456bd35e7059 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.391 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BD65_2340 b4d07792a08835ae2447456bd35e7059 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 BD65_2970 b8ab8b6d80526fb97738919ebe7a6354 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 8.6E-65 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2970 b8ab8b6d80526fb97738919ebe7a6354 344 SUPERFAMILY SSF52540 1 210 8.63E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2970 b8ab8b6d80526fb97738919ebe7a6354 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 2.1E-41 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 BD65_2970 b8ab8b6d80526fb97738919ebe7a6354 344 SUPERFAMILY SSF48019 212 333 2.55E-35 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BD65_2970 b8ab8b6d80526fb97738919ebe7a6354 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 5.0E-100 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 BD65_2970 b8ab8b6d80526fb97738919ebe7a6354 344 Gene3D G3DSA:3.40.50.300 1 140 1.6E-46 T 14-10-2018 BD65_2970 b8ab8b6d80526fb97738919ebe7a6354 344 Gene3D G3DSA:1.20.272.10 214 343 5.8E-48 T 14-10-2018 BD65_2970 b8ab8b6d80526fb97738919ebe7a6354 344 Gene3D G3DSA:1.10.8.60 143 213 6.2E-25 T 14-10-2018 BD65_2824 49d7911cf47003f1bd93fa840c668250 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 1.7E-89 T 14-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 BD65_2824 49d7911cf47003f1bd93fa840c668250 204 Gene3D G3DSA:1.20.120.80 19 204 1.0E-60 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2824 49d7911cf47003f1bd93fa840c668250 204 SUPERFAMILY SSF81452 21 202 9.42E-60 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2824 49d7911cf47003f1bd93fa840c668250 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 4.5E-15 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_1692 1e4afe48ff7aa0fc5ecdf16aa0304128 602 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 417 538 1.5E-27 T 14-10-2018 IPR025299 CstA, C-terminal domain BD65_1692 1e4afe48ff7aa0fc5ecdf16aa0304128 602 Pfam PF02554 Carbon starvation protein CstA 4 368 7.5E-138 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 BD65_965 e0404b71f3e542ec1bc7fce30b5533d5 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.62 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 BD65_965 e0404b71f3e542ec1bc7fce30b5533d5 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 9.0E-49 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 BD65_2008 b6e6294d889ae6aaecd4dd05a70c675c 841 Gene3D G3DSA:3.10.20.410 37 163 8.0E-30 T 14-10-2018 BD65_2008 b6e6294d889ae6aaecd4dd05a70c675c 841 Gene3D G3DSA:2.60.40.3110 273 362 2.3E-35 T 14-10-2018 BD65_2008 b6e6294d889ae6aaecd4dd05a70c675c 841 Pfam PF13953 PapC C-terminal domain 761 824 6.2E-20 T 14-10-2018 IPR025949 PapC-like, C-terminal domain BD65_2008 b6e6294d889ae6aaecd4dd05a70c675c 841 SUPERFAMILY SSF141729 39 163 7.06E-27 T 14-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 BD65_2008 b6e6294d889ae6aaecd4dd05a70c675c 841 Gene3D G3DSA:2.60.40.2070 758 841 1.1E-24 T 14-10-2018 BD65_2008 b6e6294d889ae6aaecd4dd05a70c675c 841 Gene3D G3DSA:2.60.40.2610 667 757 4.5E-31 T 14-10-2018 BD65_2008 b6e6294d889ae6aaecd4dd05a70c675c 841 Pfam PF00577 Outer membrane usher protein 201 752 2.7E-179 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BD65_2008 b6e6294d889ae6aaecd4dd05a70c675c 841 Pfam PF13954 PapC N-terminal domain 40 186 4.0E-36 T 14-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 BD65_2008 b6e6294d889ae6aaecd4dd05a70c675c 841 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 315 325 - T 14-10-2018 IPR018030 Fimbrial membrane usher, conserved site BD65_1232 90121b32f7900386aef611cbad1b7620 346 SUPERFAMILY SSF51430 1 344 6.15E-108 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BD65_1232 90121b32f7900386aef611cbad1b7620 346 Pfam PF00248 Aldo/keto reductase family 16 337 3.3E-72 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain BD65_1232 90121b32f7900386aef611cbad1b7620 346 Gene3D G3DSA:3.20.20.100 1 346 6.9E-139 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 Pfam PF01467 Cytidylyltransferase-like 6 134 4.9E-21 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 158 32.85 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 SUPERFAMILY SSF52374 2 156 3.49E-43 T 14-10-2018 BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 3 77 0.001 T 14-10-2018 BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 2.2E-46 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 2.2E-46 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.2E-46 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 2.2E-46 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 2.2E-46 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 63 3.6E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 Gene3D G3DSA:3.40.50.620 1 158 2.2E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_1918 9292343dcf1a68048e72fc52943c87ef 158 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 9.1E-57 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BD65_1360 f2f78709f3da96546fb43cb28e0d8ac9 428 Pfam PF00437 Type II/IV secretion system protein 74 349 1.4E-78 T 14-10-2018 IPR001482 Type II/IV secretion system protein BD65_1360 f2f78709f3da96546fb43cb28e0d8ac9 428 Gene3D G3DSA:3.40.50.300 170 406 2.7E-73 T 14-10-2018 BD65_1360 f2f78709f3da96546fb43cb28e0d8ac9 428 Gene3D G3DSA:3.30.450.380 2 168 4.0E-35 T 14-10-2018 BD65_1360 f2f78709f3da96546fb43cb28e0d8ac9 428 SUPERFAMILY SSF52540 56 356 8.99E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_415 327935d80eb97faf0a28f0bac6f51168 262 PIRSF PIRSF000094 1 260 1.1E-122 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BD65_415 327935d80eb97faf0a28f0bac6f51168 262 Gene3D G3DSA:3.40.50.720 1 262 2.5E-61 T 14-10-2018 BD65_415 327935d80eb97faf0a28f0bac6f51168 262 SUPERFAMILY SSF51735 6 253 7.0E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_415 327935d80eb97faf0a28f0bac6f51168 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 9.6E-84 T 14-10-2018 BD65_415 327935d80eb97faf0a28f0bac6f51168 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_415 327935d80eb97faf0a28f0bac6f51168 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_415 327935d80eb97faf0a28f0bac6f51168 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_643 60eb913ac7d984af34f1f772675d02de 249 Pfam PF00665 Integrase core domain 88 199 5.5E-27 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_643 60eb913ac7d984af34f1f772675d02de 249 SUPERFAMILY SSF53098 78 243 4.43E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_643 60eb913ac7d984af34f1f772675d02de 249 Pfam PF13276 HTH-like domain 11 61 1.5E-10 T 14-10-2018 IPR025948 HTH-like domain BD65_643 60eb913ac7d984af34f1f772675d02de 249 Gene3D G3DSA:3.30.420.10 82 223 1.3E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_1576 258260356e2307fee52f2838326fcb95 359 SMART SM01005 233 357 1.6E-61 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 356 3.1E-39 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 SUPERFAMILY SSF50621 226 358 1.57E-43 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BD65_1576 258260356e2307fee52f2838326fcb95 359 Gene3D G3DSA:2.40.37.10 8 352 6.1E-133 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BD65_1576 258260356e2307fee52f2838326fcb95 359 SUPERFAMILY SSF51419 8 234 4.36E-70 T 14-10-2018 IPR029066 PLP-binding barrel BD65_1576 258260356e2307fee52f2838326fcb95 359 Gene3D G3DSA:3.20.20.10 10 217 6.1E-133 T 14-10-2018 IPR029066 PLP-binding barrel BD65_1576 258260356e2307fee52f2838326fcb95 359 Hamap MF_01201 Alanine racemase. 1 357 34.941 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.4E-71 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 TIGRFAM TIGR00492 alr: alanine racemase 3 357 1.6E-136 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 PRINTS PR00992 Alanine racemase signature 155 166 3.6E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 PRINTS PR00992 Alanine racemase signature 192 219 3.6E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 PRINTS PR00992 Alanine racemase signature 339 352 3.6E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 PRINTS PR00992 Alanine racemase signature 249 264 3.6E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 PRINTS PR00992 Alanine racemase signature 287 304 3.6E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 PRINTS PR00992 Alanine racemase signature 60 78 3.6E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 PRINTS PR00992 Alanine racemase signature 120 132 3.6E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 PRINTS PR00992 Alanine racemase signature 26 42 3.6E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1576 258260356e2307fee52f2838326fcb95 359 PRINTS PR00992 Alanine racemase signature 266 281 3.6E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_539 e2d5726f1850667b00861a8333239c04 124 SUPERFAMILY SSF56349 9 119 7.65E-15 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_539 e2d5726f1850667b00861a8333239c04 124 Pfam PF00589 Phage integrase family 30 120 3.4E-7 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_539 e2d5726f1850667b00861a8333239c04 124 Gene3D G3DSA:1.10.443.10 20 124 1.5E-18 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BD65_2670 25c87ec5743b6d8973f7d7f602ea69de 430 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 140 349 1.2E-72 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_2670 25c87ec5743b6d8973f7d7f602ea69de 430 Gene3D G3DSA:3.40.50.12240 2 430 2.4E-128 T 14-10-2018 BD65_2670 25c87ec5743b6d8973f7d7f602ea69de 430 SMART SM00382 152 333 2.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2670 25c87ec5743b6d8973f7d7f602ea69de 430 SUPERFAMILY SSF52540 83 354 5.71E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2670 25c87ec5743b6d8973f7d7f602ea69de 430 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 9 428 4.7E-129 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BD65_2593 9242328f15921497a13dfa67fe6d6ed9 308 SMART SM00382 30 213 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2593 9242328f15921497a13dfa67fe6d6ed9 308 Gene3D G3DSA:3.40.50.300 1 235 8.6E-65 T 14-10-2018 BD65_2593 9242328f15921497a13dfa67fe6d6ed9 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2593 9242328f15921497a13dfa67fe6d6ed9 308 SUPERFAMILY SSF52540 3 234 5.11E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2593 9242328f15921497a13dfa67fe6d6ed9 308 Pfam PF00005 ABC transporter 21 165 4.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2487 6a4ade9a7b1f608ccf92a033bee88da1 172 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 169 1.2E-48 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase BD65_2487 6a4ade9a7b1f608ccf92a033bee88da1 172 SUPERFAMILY SSF52972 1 169 6.54E-54 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BD65_2487 6a4ade9a7b1f608ccf92a033bee88da1 172 Pfam PF01931 Protein of unknown function DUF84 7 165 1.3E-49 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 BD65_2487 6a4ade9a7b1f608ccf92a033bee88da1 172 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 27.93 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase BD65_2487 6a4ade9a7b1f608ccf92a033bee88da1 172 Gene3D G3DSA:3.90.950.10 1 172 4.4E-59 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BD65_1018 b8705679de5848a14bcb88dc9aaef7a2 454 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 3.4E-22 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal BD65_1018 b8705679de5848a14bcb88dc9aaef7a2 454 Gene3D G3DSA:2.40.30.10 355 441 2.5E-11 T 14-10-2018 BD65_1018 b8705679de5848a14bcb88dc9aaef7a2 454 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BD65_1018 b8705679de5848a14bcb88dc9aaef7a2 454 Pfam PF01136 Peptidase family U32 76 343 6.9E-95 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 14-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 549 5.5E-197 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 SUPERFAMILY SSF53383 109 566 1.56E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 SUPERFAMILY SSF52172 1 108 4.62E-35 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 Gene3D G3DSA:3.40.640.10 109 420 5.2E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 Gene3D G3DSA:3.40.50.220 1 108 6.7E-24 T 14-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 Gene3D G3DSA:3.90.100.10 601 720 6.0E-42 T 14-10-2018 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 704 3.2E-45 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 SUPERFAMILY SSF55904 572 719 6.41E-45 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 5 103 4.7E-27 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 PIRSF PIRSF009393 1 720 4.5E-292 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 BD65_2371 715f8c17769f2725f387c0df2f3811e0 720 Gene3D G3DSA:3.90.1150.10 421 600 9.9E-68 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1946 1961bddfde200e90b2c84324323fab36 145 Gene3D G3DSA:3.50.80.10 1 145 6.7E-55 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BD65_1946 1961bddfde200e90b2c84324323fab36 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 3.8E-67 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BD65_1946 1961bddfde200e90b2c84324323fab36 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 1.1E-51 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BD65_1946 1961bddfde200e90b2c84324323fab36 145 SUPERFAMILY SSF69500 1 144 1.57E-54 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BD65_1946 1961bddfde200e90b2c84324323fab36 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.324 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BD65_225 e393294b806bd10719e93a20651ca83f 505 SUPERFAMILY SSF53649 195 459 1.36E-14 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BD65_225 e393294b806bd10719e93a20651ca83f 505 Pfam PF00884 Sulfatase 194 456 5.6E-28 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BD65_225 e393294b806bd10719e93a20651ca83f 505 Gene3D G3DSA:3.40.720.10 182 484 8.3E-45 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BD65_2095 282754bbbebae184e385547395417c1c 338 PIRSF PIRSF035875 41 333 1.2E-21 T 14-10-2018 IPR017039 Virulence factor BrkB BD65_2095 282754bbbebae184e385547395417c1c 338 Pfam PF03631 Virulence factor BrkB 68 327 4.5E-45 T 14-10-2018 IPR017039 Virulence factor BrkB BD65_2095 282754bbbebae184e385547395417c1c 338 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 54 328 1.5E-121 T 14-10-2018 IPR005274 Inner membrane protein YhjD BD65_2461 b3560afa7e581deda939d7f843cff7af 360 SMART SM00267 179 349 2.7E-55 T 14-10-2018 IPR000160 GGDEF domain BD65_2461 b3560afa7e581deda939d7f843cff7af 360 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 189 348 4.9E-45 T 14-10-2018 IPR000160 GGDEF domain BD65_2461 b3560afa7e581deda939d7f843cff7af 360 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 345 3.8E-46 T 14-10-2018 IPR000160 GGDEF domain BD65_2461 b3560afa7e581deda939d7f843cff7af 360 SUPERFAMILY SSF55073 195 350 8.63E-45 T 14-10-2018 IPR029787 Nucleotide cyclase BD65_2461 b3560afa7e581deda939d7f843cff7af 360 Gene3D G3DSA:3.30.70.270 176 351 1.2E-51 T 14-10-2018 BD65_2276 9a04768ebe27010ff6f97bcf3a5393bb 118 PIRSF PIRSF000179 1 118 6.8E-50 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 BD65_2276 9a04768ebe27010ff6f97bcf3a5393bb 118 SUPERFAMILY SSF81343 1 118 2.62E-51 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2276 9a04768ebe27010ff6f97bcf3a5393bb 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 3 118 8.0E-46 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 BD65_2276 9a04768ebe27010ff6f97bcf3a5393bb 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 118 26.675 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 BD65_2276 9a04768ebe27010ff6f97bcf3a5393bb 118 Gene3D G3DSA:1.20.1300.10 1 118 2.3E-50 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_2276 9a04768ebe27010ff6f97bcf3a5393bb 118 Pfam PF02313 Fumarate reductase subunit D 5 116 6.7E-50 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 BD65_2477 5c81081abebabdbbfa64c207c3859e80 407 Pfam PF01676 Metalloenzyme superfamily 2 398 2.0E-42 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BD65_2477 5c81081abebabdbbfa64c207c3859e80 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 1.9E-191 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BD65_2477 5c81081abebabdbbfa64c207c3859e80 407 PIRSF PIRSF001491 1 407 2.2E-163 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BD65_2477 5c81081abebabdbbfa64c207c3859e80 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.389 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BD65_2477 5c81081abebabdbbfa64c207c3859e80 407 SUPERFAMILY SSF53649 1 407 1.78E-72 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BD65_2477 5c81081abebabdbbfa64c207c3859e80 407 SUPERFAMILY SSF143856 117 235 4.18E-50 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BD65_2477 5c81081abebabdbbfa64c207c3859e80 407 Gene3D G3DSA:3.30.70.1250 115 238 9.8E-154 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BD65_2477 5c81081abebabdbbfa64c207c3859e80 407 Gene3D G3DSA:3.40.720.10 3 405 9.8E-154 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BD65_697 b0f92c9a8cb22c5f40c548be7c4d388e 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 18 85 2.9E-22 T 14-10-2018 IPR005648 Flagellar hook capping protein BD65_697 b0f92c9a8cb22c5f40c548be7c4d388e 235 Pfam PF13860 FlgD Ig-like domain 121 191 5.2E-20 T 14-10-2018 IPR025965 FlgD Ig-like domain BD65_697 b0f92c9a8cb22c5f40c548be7c4d388e 235 Pfam PF13861 FlgD Tudor-like domain 93 232 6.5E-16 T 14-10-2018 IPR025963 FlgD Tudor-like domain BD65_697 b0f92c9a8cb22c5f40c548be7c4d388e 235 Gene3D G3DSA:2.30.30.910 94 229 2.1E-31 T 14-10-2018 BD65_697 b0f92c9a8cb22c5f40c548be7c4d388e 235 Gene3D G3DSA:2.60.40.4070 110 201 2.1E-31 T 14-10-2018 BD65_2809 fc0a460cf184d1fc8fd8255d35946c28 165 Pfam PF04608 Phosphatidylglycerophosphatase A 15 153 3.0E-53 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 BD65_2809 fc0a460cf184d1fc8fd8255d35946c28 165 SUPERFAMILY SSF101307 8 153 9.29E-50 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 BD65_2809 fc0a460cf184d1fc8fd8255d35946c28 165 PIRSF PIRSF006162 4 163 1.2E-60 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BD65_1787 726d2cab436c9c45e28c0725db986b29 810 Gene3D G3DSA:1.10.1740.210 171 304 5.0E-38 T 14-10-2018 BD65_1787 726d2cab436c9c45e28c0725db986b29 810 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 166 426 2.7E-54 T 14-10-2018 IPR031161 Peptidase family M60 domain BD65_1787 726d2cab436c9c45e28c0725db986b29 810 Gene3D G3DSA:2.60.120.1250 39 170 9.6E-9 T 14-10-2018 BD65_1787 726d2cab436c9c45e28c0725db986b29 810 SMART SM01276 78 376 9.9E-89 T 14-10-2018 IPR031161 Peptidase family M60 domain BD65_1787 726d2cab436c9c45e28c0725db986b29 810 Gene3D G3DSA:2.10.10.20 660 723 2.2E-6 T 14-10-2018 BD65_1787 726d2cab436c9c45e28c0725db986b29 810 Gene3D G3DSA:3.30.160.280 577 646 3.6E-20 T 14-10-2018 BD65_1787 726d2cab436c9c45e28c0725db986b29 810 SUPERFAMILY SSF51055 662 722 5.49E-6 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BD65_1787 726d2cab436c9c45e28c0725db986b29 810 Gene3D G3DSA:1.10.390.30 305 461 1.5E-44 T 14-10-2018 BD65_1787 726d2cab436c9c45e28c0725db986b29 810 SMART SM00495 664 715 2.0 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BD65_1787 726d2cab436c9c45e28c0725db986b29 810 SMART SM00495 752 803 2.1 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BD65_71 ee17184817bb69c7c17937f8d66801d4 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 50.679 T 14-10-2018 IPR022987 Uncharacterised protein family UPF0227 BD65_71 ee17184817bb69c7c17937f8d66801d4 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.6E-68 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BD65_71 ee17184817bb69c7c17937f8d66801d4 180 SUPERFAMILY SSF53474 2 173 1.89E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_71 ee17184817bb69c7c17937f8d66801d4 180 Gene3D G3DSA:3.40.50.1820 1 179 1.2E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_12 892f894e99a6a5ea0ac32bcaf475adbb 527 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 378 460 5.9E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BD65_12 892f894e99a6a5ea0ac32bcaf475adbb 527 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 435 453 3.8E-11 T 14-10-2018 BD65_12 892f894e99a6a5ea0ac32bcaf475adbb 527 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 292 308 3.8E-11 T 14-10-2018 BD65_12 892f894e99a6a5ea0ac32bcaf475adbb 527 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 375 394 3.8E-11 T 14-10-2018 BD65_12 892f894e99a6a5ea0ac32bcaf475adbb 527 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 405 424 3.8E-11 T 14-10-2018 BD65_12 892f894e99a6a5ea0ac32bcaf475adbb 527 Gene3D G3DSA:3.30.230.10 268 509 5.9E-95 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BD65_12 892f894e99a6a5ea0ac32bcaf475adbb 527 Pfam PF13654 AAA domain 81 266 9.0E-26 T 14-10-2018 BD65_12 892f894e99a6a5ea0ac32bcaf475adbb 527 Gene3D G3DSA:3.40.50.300 40 180 2.2E-14 T 14-10-2018 BD65_12 892f894e99a6a5ea0ac32bcaf475adbb 527 SUPERFAMILY SSF54211 292 483 5.31E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BD65_904 687ca6717b1ddc312ee267fa6ee83dd4 254 PRINTS PR01805 VacJ lipoprotein signature 32 45 6.1E-31 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BD65_904 687ca6717b1ddc312ee267fa6ee83dd4 254 PRINTS PR01805 VacJ lipoprotein signature 50 66 6.1E-31 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BD65_904 687ca6717b1ddc312ee267fa6ee83dd4 254 PRINTS PR01805 VacJ lipoprotein signature 101 118 6.1E-31 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BD65_904 687ca6717b1ddc312ee267fa6ee83dd4 254 PRINTS PR01805 VacJ lipoprotein signature 140 157 6.1E-31 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BD65_904 687ca6717b1ddc312ee267fa6ee83dd4 254 Pfam PF04333 MlaA lipoprotein 31 224 1.0E-65 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BD65_3036 02ef82e8eac8db9fd5b9d8d685533e8a 522 PIRSF PIRSF006446 354 521 5.3E-29 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BD65_3036 02ef82e8eac8db9fd5b9d8d685533e8a 522 PIRSF PIRSF006446 1 332 1.8E-113 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BD65_3036 02ef82e8eac8db9fd5b9d8d685533e8a 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 2.7E-173 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BD65_3251 7dcf703e5a6004565ff9a58187a173cf 69 SUPERFAMILY SSF50249 2 67 3.21E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3251 7dcf703e5a6004565ff9a58187a173cf 69 PRINTS PR00050 Cold shock protein signature 42 60 1.7E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3251 7dcf703e5a6004565ff9a58187a173cf 69 PRINTS PR00050 Cold shock protein signature 6 21 1.7E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3251 7dcf703e5a6004565ff9a58187a173cf 69 PRINTS PR00050 Cold shock protein signature 27 36 1.7E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3251 7dcf703e5a6004565ff9a58187a173cf 69 SMART SM00357 5 69 3.2E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_3251 7dcf703e5a6004565ff9a58187a173cf 69 Gene3D G3DSA:2.40.50.140 5 68 1.4E-20 T 14-10-2018 BD65_3251 7dcf703e5a6004565ff9a58187a173cf 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 4.3E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3251 7dcf703e5a6004565ff9a58187a173cf 69 PIRSF PIRSF002599 1 69 5.7E-18 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BD65_598 513f3452b51d58bcd44042f63e7cf743 191 Gene3D G3DSA:2.80.10.50 40 191 3.2E-25 T 14-10-2018 BD65_598 513f3452b51d58bcd44042f63e7cf743 191 SUPERFAMILY SSF50370 47 190 1.59E-15 T 14-10-2018 IPR035992 Ricin B-like lectins BD65_598 513f3452b51d58bcd44042f63e7cf743 191 Pfam PF03498 Cytolethal distending toxin A/C domain 53 190 3.2E-9 T 14-10-2018 IPR003558 Cytolethal distending toxin A/C GO:0009405 BD65_1959 ef17230cec5d322042ad31bf651ed6c5 90 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 5.1E-46 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 BD65_1959 ef17230cec5d322042ad31bf651ed6c5 90 Gene3D G3DSA:1.10.1580.20 1 89 5.6E-46 T 14-10-2018 IPR038134 YihD-like superfamily BD65_1959 ef17230cec5d322042ad31bf651ed6c5 90 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-42 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 BD65_1245 0a9923794e4f9a7ff6c825a4bc57f161 321 Gene3D G3DSA:1.10.40.60 91 203 2.3E-14 T 14-10-2018 IPR038072 GspK, central domain superfamily BD65_1245 0a9923794e4f9a7ff6c825a4bc57f161 321 SUPERFAMILY SSF158544 204 253 1.23E-9 T 14-10-2018 IPR038072 GspK, central domain superfamily BD65_1245 0a9923794e4f9a7ff6c825a4bc57f161 321 Gene3D G3DSA:3.30.1300.30 79 298 2.3E-14 T 14-10-2018 BD65_1245 0a9923794e4f9a7ff6c825a4bc57f161 321 Pfam PF03934 Type II secretion system (T2SS), protein K 80 305 2.1E-19 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BD65_1245 0a9923794e4f9a7ff6c825a4bc57f161 321 SUPERFAMILY SSF158544 94 201 1.2E-6 T 14-10-2018 IPR038072 GspK, central domain superfamily BD65_1245 0a9923794e4f9a7ff6c825a4bc57f161 321 Gene3D G3DSA:1.10.40.60 204 276 2.3E-14 T 14-10-2018 IPR038072 GspK, central domain superfamily BD65_1584 6b8bdec6e0a1fc9b35da709f492eebc5 818 Pfam PF01553 Acyltransferase 281 423 3.6E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BD65_1584 6b8bdec6e0a1fc9b35da709f492eebc5 818 PIRSF PIRSF500064 2 814 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BD65_1584 6b8bdec6e0a1fc9b35da709f492eebc5 818 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 806 32.53 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BD65_1584 6b8bdec6e0a1fc9b35da709f492eebc5 818 PIRSF PIRSF000437 19 812 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 BD65_1584 6b8bdec6e0a1fc9b35da709f492eebc5 818 SUPERFAMILY SSF69593 240 489 1.44E-25 T 14-10-2018 BD65_1584 6b8bdec6e0a1fc9b35da709f492eebc5 818 SMART SM00563 299 426 6.3E-28 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BD65_1584 6b8bdec6e0a1fc9b35da709f492eebc5 818 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 798 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BD65_538 247e462cc6f332968fffca9ed81b1fcc 381 SUPERFAMILY SSF56601 27 380 6.16E-101 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_538 247e462cc6f332968fffca9ed81b1fcc 381 Gene3D G3DSA:3.40.710.10 22 380 1.4E-132 T 14-10-2018 BD65_538 247e462cc6f332968fffca9ed81b1fcc 381 ProSitePatterns PS00336 Beta-lactamase class-C active site. 80 87 - T 14-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 BD65_538 247e462cc6f332968fffca9ed81b1fcc 381 Pfam PF00144 Beta-lactamase 33 380 2.1E-83 T 14-10-2018 IPR001466 Beta-lactamase-related BD65_456 337773ec0e468dd63e945083a1d2a953 428 SUPERFAMILY SSF101960 37 423 2.88E-107 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BD65_456 337773ec0e468dd63e945083a1d2a953 428 Pfam PF01458 Uncharacterized protein family (UPF0051) 175 398 2.2E-72 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 BD65_456 337773ec0e468dd63e945083a1d2a953 428 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 137 414 4.8E-84 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 BD65_2662 55d276b76be7aad0a52a847db438112d 100 SUPERFAMILY SSF140129 32 86 2.88E-5 T 14-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 BD65_2864 cc31c4f6f9d9808ccf4e3d8eb0c93bdd 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 110 313 1.5E-19 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 BD65_2864 cc31c4f6f9d9808ccf4e3d8eb0c93bdd 326 PIRSF PIRSF017082 4 326 1.4E-78 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 BD65_2864 cc31c4f6f9d9808ccf4e3d8eb0c93bdd 326 SUPERFAMILY SSF53850 64 241 3.04E-8 T 14-10-2018 BD65_2864 cc31c4f6f9d9808ccf4e3d8eb0c93bdd 326 Gene3D G3DSA:3.40.190.10 125 252 3.7E-56 T 14-10-2018 BD65_2864 cc31c4f6f9d9808ccf4e3d8eb0c93bdd 326 Gene3D G3DSA:3.40.190.150 26 316 3.7E-56 T 14-10-2018 BD65_2412 6f17dea563c19d0e40b4f2684b11b12a 187 Gene3D G3DSA:3.30.420.10 110 186 3.9E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2412 6f17dea563c19d0e40b4f2684b11b12a 187 Pfam PF00665 Integrase core domain 119 186 1.4E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_2412 6f17dea563c19d0e40b4f2684b11b12a 187 SUPERFAMILY SSF53098 109 186 1.52E-14 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2412 6f17dea563c19d0e40b4f2684b11b12a 187 Pfam PF13276 HTH-like domain 42 92 8.7E-11 T 14-10-2018 IPR025948 HTH-like domain BD65_2959 17a455d984f17ac50092dbbefbe30733 66 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 66 18.927 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BD65_2959 17a455d984f17ac50092dbbefbe30733 66 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.3E-18 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BD65_2959 17a455d984f17ac50092dbbefbe30733 66 Pfam PF02416 mttA/Hcf106 family 4 48 1.3E-11 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BD65_2959 17a455d984f17ac50092dbbefbe30733 66 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 66 27.345 T 14-10-2018 IPR024905 Sec-independent protein translocase protein TatE BD65_701 959509ffb29c5b570c509c54355c0bbf 98 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 89 1.4E-9 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal BD65_701 959509ffb29c5b570c509c54355c0bbf 98 SUPERFAMILY SSF101498 18 89 8.24E-13 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily BD65_701 959509ffb29c5b570c509c54355c0bbf 98 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 91 3.1E-19 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 BD65_3225 0fd13309f933a35ddf3d6962a8bb9162 236 SUPERFAMILY SSF55729 2 228 6.36E-94 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_3225 0fd13309f933a35ddf3d6962a8bb9162 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 203 1.2E-71 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BD65_3225 0fd13309f933a35ddf3d6962a8bb9162 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 214 2.4E-75 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BD65_3225 0fd13309f933a35ddf3d6962a8bb9162 236 Gene3D G3DSA:2.30.210.20 2 61 2.2E-26 T 14-10-2018 BD65_3225 0fd13309f933a35ddf3d6962a8bb9162 236 Gene3D G3DSA:3.40.630.70 62 234 4.5E-69 T 14-10-2018 BD65_3225 0fd13309f933a35ddf3d6962a8bb9162 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 97.191 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BD65_2022 a2fe9ba9d4b21c6c15bdd3339e9e785a 428 Gene3D G3DSA:2.120.10.30 284 428 2.4E-20 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BD65_2022 a2fe9ba9d4b21c6c15bdd3339e9e785a 428 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 343 424 6.5E-6 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 BD65_2022 a2fe9ba9d4b21c6c15bdd3339e9e785a 428 Pfam PF12566 Protein of unknown function (DUF3748) 68 188 9.4E-59 T 14-10-2018 IPR022223 Protein of unknown function DUF3748 BD65_2022 a2fe9ba9d4b21c6c15bdd3339e9e785a 428 SUPERFAMILY SSF82171 23 425 5.1E-20 T 14-10-2018 BD65_2973 b247bfdcf036613f43a514cfa8018780 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 1.2E-54 T 14-10-2018 IPR009912 Zinc-ribbon containing domain BD65_772 38c7b41f76d0e92528d60c642135a81d 140 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.6E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BD65_772 38c7b41f76d0e92528d60c642135a81d 140 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.6E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BD65_772 38c7b41f76d0e92528d60c642135a81d 140 SUPERFAMILY SSF55811 4 131 2.71E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_772 38c7b41f76d0e92528d60c642135a81d 140 Pfam PF00293 NUDIX domain 5 125 2.5E-24 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_772 38c7b41f76d0e92528d60c642135a81d 140 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BD65_772 38c7b41f76d0e92528d60c642135a81d 140 Gene3D G3DSA:3.90.79.10 2 131 1.7E-36 T 14-10-2018 BD65_2857 ed7e60716bacbb0462b19949be5880cd 1107 Gene3D G3DSA:2.30.30.60 929 978 3.5E-13 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BD65_2857 ed7e60716bacbb0462b19949be5880cd 1107 Gene3D G3DSA:3.30.70.100 982 1075 5.3E-21 T 14-10-2018 BD65_2857 ed7e60716bacbb0462b19949be5880cd 1107 SUPERFAMILY SSF82689 981 1081 5.75E-26 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BD65_2857 ed7e60716bacbb0462b19949be5880cd 1107 SUPERFAMILY SSF82861 829 912 5.62E-7 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BD65_2857 ed7e60716bacbb0462b19949be5880cd 1107 Pfam PF12795 Mechanosensitive ion channel porin domain 34 272 1.2E-65 T 14-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain BD65_2857 ed7e60716bacbb0462b19949be5880cd 1107 Pfam PF00924 Mechanosensitive ion channel 871 1070 5.6E-59 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BD65_2857 ed7e60716bacbb0462b19949be5880cd 1107 SUPERFAMILY SSF50182 914 979 6.54E-17 T 14-10-2018 IPR010920 LSM domain superfamily BD65_2857 ed7e60716bacbb0462b19949be5880cd 1107 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 492 810 3.9E-103 T 14-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 BD65_2857 ed7e60716bacbb0462b19949be5880cd 1107 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 943 977 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 BD65_846 9d3d24426e16d049a5e25ebb9d2cc503 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 47 183 1.0E-68 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_846 9d3d24426e16d049a5e25ebb9d2cc503 225 Gene3D G3DSA:3.40.50.12280 26 193 5.0E-70 T 14-10-2018 BD65_846 9d3d24426e16d049a5e25ebb9d2cc503 225 SUPERFAMILY SSF56770 44 190 6.02E-64 T 14-10-2018 BD65_846 9d3d24426e16d049a5e25ebb9d2cc503 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 182 41.81 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_846 9d3d24426e16d049a5e25ebb9d2cc503 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 69 175 5.2E-22 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_846 9d3d24426e16d049a5e25ebb9d2cc503 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_1921 344c65bbc367eb07e2d952a6623e12be 78 Pfam PF00830 Ribosomal L28 family 3 62 1.8E-25 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1921 344c65bbc367eb07e2d952a6623e12be 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.265 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1921 344c65bbc367eb07e2d952a6623e12be 78 Gene3D G3DSA:2.30.170.40 2 78 7.7E-33 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1921 344c65bbc367eb07e2d952a6623e12be 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 9.0E-29 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1921 344c65bbc367eb07e2d952a6623e12be 78 SUPERFAMILY SSF143800 1 77 7.46E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 SUPERFAMILY SSF51206 8 136 1.27E-35 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 SMART SM00100 2 122 7.6E-27 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 SMART SM00419 160 208 4.5E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 Gene3D G3DSA:1.10.10.10 139 207 1.3E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_2178 780433b226ef0d8b7e86d7509f2e96ac 210 Gene3D G3DSA:2.60.120.10 10 138 6.9E-45 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_1969 5a50fbb5b541d607544922b0b6396d78 295 Gene3D G3DSA:3.40.50.2300 127 262 5.5E-99 T 14-10-2018 BD65_1969 5a50fbb5b541d607544922b0b6396d78 295 SUPERFAMILY SSF53822 26 295 1.07E-86 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_1969 5a50fbb5b541d607544922b0b6396d78 295 Pfam PF13407 Periplasmic binding protein domain 29 281 2.8E-60 T 14-10-2018 IPR025997 Periplasmic binding protein BD65_1969 5a50fbb5b541d607544922b0b6396d78 295 Gene3D G3DSA:3.40.50.2300 31 281 5.5E-99 T 14-10-2018 BD65_3111 1912ee935124ff459019ec0d5e333e5e 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 247 6.1E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_3111 1912ee935124ff459019ec0d5e333e5e 260 Gene3D G3DSA:1.10.3720.10 52 249 2.8E-28 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3111 1912ee935124ff459019ec0d5e333e5e 260 SUPERFAMILY SSF161098 53 242 1.7E-34 T 14-10-2018 IPR035906 MetI-like superfamily BD65_102 5e93a2aa5939e72b8486e2c8438dc493 109 SUPERFAMILY SSF50882 3 107 5.49E-29 T 14-10-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 BD65_102 5e93a2aa5939e72b8486e2c8438dc493 109 Gene3D G3DSA:2.40.128.10 3 108 1.6E-34 T 14-10-2018 BD65_102 5e93a2aa5939e72b8486e2c8438dc493 109 Pfam PF02974 Protease inhibitor Inh 8 106 1.7E-22 T 14-10-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 BD65_102 5e93a2aa5939e72b8486e2c8438dc493 109 PRINTS PR01274 Metalloprotease inhibitor signature 46 57 1.8E-11 T 14-10-2018 IPR022815 Protease inhibitor I38 BD65_102 5e93a2aa5939e72b8486e2c8438dc493 109 PRINTS PR01274 Metalloprotease inhibitor signature 3 19 1.8E-11 T 14-10-2018 IPR022815 Protease inhibitor I38 BD65_102 5e93a2aa5939e72b8486e2c8438dc493 109 PRINTS PR01274 Metalloprotease inhibitor signature 68 81 1.8E-11 T 14-10-2018 IPR022815 Protease inhibitor I38 BD65_102 5e93a2aa5939e72b8486e2c8438dc493 109 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 12 97 2.0E-43 T 14-10-2018 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 Gene3D G3DSA:3.40.50.12740 1 191 3.3E-52 T 14-10-2018 BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 165 8.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 177 8.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 135 149 8.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 SMART SM00421 132 189 1.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 ProSitePatterns PS00622 LuxR-type HTH domain signature. 149 176 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 SUPERFAMILY SSF52172 2 126 2.7E-25 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 SUPERFAMILY SSF46894 118 190 3.74E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 Pfam PF00196 Bacterial regulatory proteins, luxR family 134 187 8.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 Pfam PF00072 Response regulator receiver domain 2 110 8.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2070 4823bdc42d6657a58b6b1884b391c7a1 192 SMART SM00448 1 109 7.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1862 7dfba2587a66f5538ae9b644fc8401a0 172 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 172 8.2E-54 T 14-10-2018 IPR006498 Tail tube protein BD65_1862 7dfba2587a66f5538ae9b644fc8401a0 172 Pfam PF04985 Phage tail tube protein FII 4 171 2.3E-66 T 14-10-2018 IPR006498 Tail tube protein BD65_1357 4269300f8b2fd20221b430d627c99299 438 Pfam PF00263 Bacterial type II and III secretion system protein 233 390 8.1E-40 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 BD65_1357 4269300f8b2fd20221b430d627c99299 438 PRINTS PR00811 Bacterial general secretion pathway protein D signature 355 373 9.5E-7 T 14-10-2018 IPR001775 GspD/PilQ family BD65_1357 4269300f8b2fd20221b430d627c99299 438 PRINTS PR00811 Bacterial general secretion pathway protein D signature 184 194 9.5E-7 T 14-10-2018 IPR001775 GspD/PilQ family BD65_1357 4269300f8b2fd20221b430d627c99299 438 Pfam PF13629 Pilus formation protein N terminal region 33 101 3.6E-9 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal BD65_1357 4269300f8b2fd20221b430d627c99299 438 PRINTS PR01032 Gene IV protein signature 371 393 2.1E-5 T 14-10-2018 BD65_1357 4269300f8b2fd20221b430d627c99299 438 PRINTS PR01032 Gene IV protein signature 318 346 2.1E-5 T 14-10-2018 BD65_1357 4269300f8b2fd20221b430d627c99299 438 PRINTS PR01032 Gene IV protein signature 212 235 2.1E-5 T 14-10-2018 BD65_543 b3c4f559ed90185c0572ab3789910638 171 Gene3D G3DSA:1.20.1260.10 1 169 2.1E-49 T 14-10-2018 IPR012347 Ferritin-like BD65_543 b3c4f559ed90185c0572ab3789910638 171 Pfam PF00210 Ferritin-like domain 8 143 4.1E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BD65_543 b3c4f559ed90185c0572ab3789910638 171 SUPERFAMILY SSF47240 1 159 7.27E-58 T 14-10-2018 IPR009078 Ferritin-like superfamily BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 Gene3D G3DSA:3.50.50.60 7 329 1.2E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 Gene3D G3DSA:1.10.287.990 37 107 1.2E-93 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 4.3E-31 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 4.3E-31 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 4.3E-31 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.3E-31 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 4.3E-31 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 4.3E-31 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 2.0E-18 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 2.0E-18 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 2.0E-18 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.0E-18 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.0E-18 T 14-10-2018 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 5.3E-40 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 SUPERFAMILY SSF51905 1 336 8.46E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1813 39935e7995b32fa7443aac79cd465fb4 341 Gene3D G3DSA:3.50.50.60 147 268 1.2E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_39 2564448dae1b396c7a451b9db2640c51 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 4 305 2.8E-144 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 BD65_39 2564448dae1b396c7a451b9db2640c51 306 PIRSF PIRSF026649 1 305 1.9E-98 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BD65_39 2564448dae1b396c7a451b9db2640c51 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 296 6.0E-102 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BD65_39 2564448dae1b396c7a451b9db2640c51 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 305 52.797 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 BD65_755 f38dd217f7c6575717eea3a55a3ad8d1 369 SUPERFAMILY SSF51735 2 353 3.32E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_755 f38dd217f7c6575717eea3a55a3ad8d1 369 Pfam PF07993 Male sterility protein 6 237 2.5E-33 T 14-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 BD65_755 f38dd217f7c6575717eea3a55a3ad8d1 369 Gene3D G3DSA:3.40.50.720 1 325 2.1E-47 T 14-10-2018 BD65_2339 3c4367bcb07705a14778fe2ecf0bacb7 323 Pfam PF00892 EamA-like transporter family 9 144 1.5E-26 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_2339 3c4367bcb07705a14778fe2ecf0bacb7 323 Pfam PF00892 EamA-like transporter family 161 268 3.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_2339 3c4367bcb07705a14778fe2ecf0bacb7 323 SUPERFAMILY SSF103481 43 145 3.92E-13 T 14-10-2018 BD65_1426 d2c812c1fc76dc2ea65cc9102671f0a7 340 SUPERFAMILY SSF53098 118 290 2.09E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_1426 d2c812c1fc76dc2ea65cc9102671f0a7 340 Gene3D G3DSA:3.30.420.10 117 249 4.3E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_1426 d2c812c1fc76dc2ea65cc9102671f0a7 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 7.0E-9 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 BD65_1426 d2c812c1fc76dc2ea65cc9102671f0a7 340 Pfam PF00665 Integrase core domain 118 243 3.9E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_1426 d2c812c1fc76dc2ea65cc9102671f0a7 340 Gene3D G3DSA:1.10.10.60 7 40 3.6E-8 T 14-10-2018 BD65_1426 d2c812c1fc76dc2ea65cc9102671f0a7 340 SUPERFAMILY SSF46689 12 89 5.79E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_889 4268588d973e05d1d01013a576abc20f 300 SUPERFAMILY SSF51197 95 240 1.35E-17 T 14-10-2018 BD65_889 4268588d973e05d1d01013a576abc20f 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 68 222 8.8E-46 T 14-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 BD65_889 4268588d973e05d1d01013a576abc20f 300 Gene3D G3DSA:2.60.120.330 43 226 4.7E-41 T 14-10-2018 IPR027443 Isopenicillin N synthase-like BD65_2369 0d583314fa322298f5190a74db77672c 166 Pfam PF13508 Acetyltransferase (GNAT) domain 44 123 6.4E-9 T 14-10-2018 IPR000182 GNAT domain BD65_2369 0d583314fa322298f5190a74db77672c 166 SUPERFAMILY SSF55729 2 136 4.33E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2369 0d583314fa322298f5190a74db77672c 166 Gene3D G3DSA:3.40.630.30 1 166 1.2E-49 T 14-10-2018 BD65_32 f5a358de04da91607edffa3bc93bc6bb 413 Pfam PF13005 zinc-finger binding domain of transposase IS66 54 95 9.4E-14 T 14-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 BD65_32 f5a358de04da91607edffa3bc93bc6bb 413 Pfam PF03050 Transposase IS66 family 111 169 1.7E-14 T 14-10-2018 IPR004291 Transposase, IS66 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 Gene3D G3DSA:1.10.1900.20 56 118 1.0E-28 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 Gene3D G3DSA:1.10.720.90 2 55 5.8E-25 T 14-10-2018 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 SUPERFAMILY SSF74731 3 117 4.97E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.3E-53 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.093 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-13 T 14-10-2018 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_493 82bffa4214aa337f1662ab43d1415a5e 118 Pfam PF00453 Ribosomal protein L20 3 109 9.2E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_1755 9a3a301668df55fb57f1005fa617823b 106 Pfam PF01491 Frataxin-like domain 1 102 1.3E-29 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_1755 9a3a301668df55fb57f1005fa617823b 106 SUPERFAMILY SSF55387 1 105 2.44E-39 T 14-10-2018 BD65_1755 9a3a301668df55fb57f1005fa617823b 106 SMART SM01219 1 106 2.0E-54 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_1755 9a3a301668df55fb57f1005fa617823b 106 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 105 28.329 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_1755 9a3a301668df55fb57f1005fa617823b 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_1755 9a3a301668df55fb57f1005fa617823b 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 2.5E-43 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_1755 9a3a301668df55fb57f1005fa617823b 106 Gene3D G3DSA:3.30.920.10 1 106 3.6E-41 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BD65_537 ce50f45c0339d5a3fb28eab461e64228 109 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 12 98 8.4E-32 T 14-10-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin BD65_537 ce50f45c0339d5a3fb28eab461e64228 109 SUPERFAMILY SSF143011 11 92 6.8E-7 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BD65_537 ce50f45c0339d5a3fb28eab461e64228 109 Gene3D G3DSA:3.30.2310.20 9 100 1.9E-6 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BD65_828 e7781465f1fc01f3d18d4de7ada6e3d4 323 SMART SM00922 115 210 1.9E-8 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BD65_828 e7781465f1fc01f3d18d4de7ada6e3d4 323 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 7.3E-116 T 14-10-2018 BD65_828 e7781465f1fc01f3d18d4de7ada6e3d4 323 Gene3D G3DSA:3.30.390.10 4 302 1.8E-125 T 14-10-2018 IPR029017 Enolase-like, N-terminal BD65_828 e7781465f1fc01f3d18d4de7ada6e3d4 323 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 321 23.388 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 BD65_828 e7781465f1fc01f3d18d4de7ada6e3d4 323 SUPERFAMILY SSF51604 108 313 3.41E-51 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BD65_828 e7781465f1fc01f3d18d4de7ada6e3d4 323 Gene3D G3DSA:3.20.20.120 98 295 1.8E-125 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BD65_828 e7781465f1fc01f3d18d4de7ada6e3d4 323 SUPERFAMILY SSF54826 1 99 9.42E-28 T 14-10-2018 BD65_828 e7781465f1fc01f3d18d4de7ada6e3d4 323 Pfam PF13378 Enolase C-terminal domain-like 129 279 6.6E-14 T 14-10-2018 IPR029065 Enolase C-terminal domain-like BD65_176 bdd0a857c6762c86875c97fc2b43f203 131 Pfam PF01124 MAPEG family 4 120 5.7E-25 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein BD65_176 bdd0a857c6762c86875c97fc2b43f203 131 Gene3D G3DSA:1.20.120.550 1 128 3.0E-25 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BD65_176 bdd0a857c6762c86875c97fc2b43f203 131 SUPERFAMILY SSF161084 4 125 2.88E-30 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BD65_467 a3f168b0e396c3eb2f6cdb02a01c753d 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 169 7.7E-22 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BD65_467 a3f168b0e396c3eb2f6cdb02a01c753d 687 SUPERFAMILY SSF56935 52 687 6.96E-98 T 14-10-2018 BD65_467 a3f168b0e396c3eb2f6cdb02a01c753d 687 Gene3D G3DSA:2.40.170.20 175 687 4.0E-124 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BD65_467 a3f168b0e396c3eb2f6cdb02a01c753d 687 Gene3D G3DSA:2.170.130.10 51 174 1.9E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BD65_467 a3f168b0e396c3eb2f6cdb02a01c753d 687 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 53 687 8.6E-129 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 BD65_467 a3f168b0e396c3eb2f6cdb02a01c753d 687 Pfam PF00593 TonB dependent receptor 254 685 3.1E-40 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BD65_467 a3f168b0e396c3eb2f6cdb02a01c753d 687 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 59 - T 14-10-2018 IPR010916 TonB box, conserved site BD65_467 a3f168b0e396c3eb2f6cdb02a01c753d 687 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 52 687 5.1E-171 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 BD65_1899 61161943014f0ceb4c2ff2f44e179e7f 164 Pfam PF07813 LTXXQ motif family protein 46 143 1.1E-21 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 BD65_1899 61161943014f0ceb4c2ff2f44e179e7f 164 PIRSF PIRSF034445 1 153 2.6E-33 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 BD65_1899 61161943014f0ceb4c2ff2f44e179e7f 164 Gene3D G3DSA:1.20.120.1490 48 155 6.7E-40 T 14-10-2018 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 PRINTS PR01440 Cellulose synthase subunit B signature 222 245 6.9E-36 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 PRINTS PR01440 Cellulose synthase subunit B signature 303 324 6.9E-36 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 PRINTS PR01440 Cellulose synthase subunit B signature 180 201 6.9E-36 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 PRINTS PR01440 Cellulose synthase subunit B signature 519 538 6.9E-36 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 PRINTS PR01440 Cellulose synthase subunit B signature 139 162 6.9E-36 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 PRINTS PR01440 Cellulose synthase subunit B signature 90 111 6.9E-36 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 PRINTS PR01440 Cellulose synthase subunit B signature 709 729 6.9E-36 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 PRINTS PR01440 Cellulose synthase subunit B signature 386 407 6.9E-36 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 PRINTS PR01440 Cellulose synthase subunit B signature 556 576 6.9E-36 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 Gene3D G3DSA:2.60.120.260 62 193 5.6E-24 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 Pfam PF03170 Bacterial cellulose synthase subunit 63 670 3.4E-220 T 14-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 BD65_2085 b1755ce1bf9a7cf3afd35ff8650c449b 770 Gene3D G3DSA:2.60.120.260 352 511 2.4E-25 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BD65_2635 d3ae28bc6178d3be9101fe89d848e2da 242 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 235 1.7E-80 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BD65_2635 d3ae28bc6178d3be9101fe89d848e2da 242 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 233 42.898 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BD65_2635 d3ae28bc6178d3be9101fe89d848e2da 242 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 233 7.3E-73 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BD65_2635 d3ae28bc6178d3be9101fe89d848e2da 242 SUPERFAMILY SSF53448 11 233 9.18E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2635 d3ae28bc6178d3be9101fe89d848e2da 242 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 108 115 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BD65_2635 d3ae28bc6178d3be9101fe89d848e2da 242 Gene3D G3DSA:3.90.550.10 7 240 8.2E-73 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_1093 91d1178e854bd25b57e07946be997419 325 Pfam PF11187 Protein of unknown function (DUF2974) 136 214 2.9E-5 T 14-10-2018 IPR024499 Protein of unknown function DUF2974 BD65_1093 91d1178e854bd25b57e07946be997419 325 SUPERFAMILY SSF53474 91 260 6.5E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1093 91d1178e854bd25b57e07946be997419 325 Gene3D G3DSA:3.40.50.1820 117 229 1.3E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1495 5caea5ac408e16c8d874b3edc372be5f 213 SUPERFAMILY SSF52833 11 110 7.75E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1495 5caea5ac408e16c8d874b3edc372be5f 213 SUPERFAMILY SSF47616 82 208 2.13E-28 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BD65_1495 5caea5ac408e16c8d874b3edc372be5f 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.6E-18 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BD65_1495 5caea5ac408e16c8d874b3edc372be5f 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 2.2E-12 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal BD65_1495 5caea5ac408e16c8d874b3edc372be5f 213 Gene3D G3DSA:3.40.30.10 11 202 2.2E-81 T 14-10-2018 BD65_1495 5caea5ac408e16c8d874b3edc372be5f 213 Gene3D G3DSA:1.20.1050.10 89 193 2.2E-81 T 14-10-2018 BD65_1550 7c04fe438c5d8709a5428894aee12d82 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 2.9E-137 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI BD65_1550 7c04fe438c5d8709a5428894aee12d82 326 SUPERFAMILY SSF50129 1 144 9.43E-45 T 14-10-2018 IPR011032 GroES-like superfamily BD65_1550 7c04fe438c5d8709a5428894aee12d82 326 SUPERFAMILY SSF51735 115 287 2.47E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1550 7c04fe438c5d8709a5428894aee12d82 326 Pfam PF00107 Zinc-binding dehydrogenase 158 270 1.0E-15 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BD65_1550 7c04fe438c5d8709a5428894aee12d82 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 85 1.9E-4 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BD65_1550 7c04fe438c5d8709a5428894aee12d82 326 Gene3D G3DSA:3.40.50.720 125 292 5.3E-125 T 14-10-2018 BD65_1550 7c04fe438c5d8709a5428894aee12d82 326 Gene3D G3DSA:3.90.180.10 16 323 5.3E-125 T 14-10-2018 BD65_1550 7c04fe438c5d8709a5428894aee12d82 326 SMART SM00829 12 322 7.4E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BD65_2218 ef579afa098d4894ee0264509b155517 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 3.0E-59 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 BD65_2218 ef579afa098d4894ee0264509b155517 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2218 ef579afa098d4894ee0264509b155517 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.187 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BD65_2218 ef579afa098d4894ee0264509b155517 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 7.1E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BD65_2218 ef579afa098d4894ee0264509b155517 123 SMART SM01374 1 123 1.4E-84 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BD65_2218 ef579afa098d4894ee0264509b155517 123 SUPERFAMILY SSF50193 2 122 1.57E-50 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BD65_2218 ef579afa098d4894ee0264509b155517 123 Gene3D G3DSA:2.40.150.20 1 123 2.4E-56 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BD65_1106 0b93775f55211e946052362cabd4e9e3 81 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 3.7E-19 T 14-10-2018 IPR007684 Zinc finger, Ogr/Delta-type BD65_650 2f5cac87bd78732ce9922e39cd042dc5 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 7.9E-36 T 14-10-2018 BD65_70 635b270e2a393f7fcc540d7164613aa9 343 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 13 292 5.7E-93 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BD65_70 635b270e2a393f7fcc540d7164613aa9 343 SUPERFAMILY SSF51445 3 297 1.9E-83 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_70 635b270e2a393f7fcc540d7164613aa9 343 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.32 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BD65_70 635b270e2a393f7fcc540d7164613aa9 343 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 BD65_70 635b270e2a393f7fcc540d7164613aa9 343 Gene3D G3DSA:3.20.20.300 1 343 2.4E-131 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BD65_1742 91bfde9e1fcf1c08a42442807ea5170d 143 Pfam PF03061 Thioesterase superfamily 46 131 1.2E-15 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BD65_1742 91bfde9e1fcf1c08a42442807ea5170d 143 SUPERFAMILY SSF54637 4 142 4.72E-24 T 14-10-2018 IPR029069 HotDog domain superfamily BD65_1742 91bfde9e1fcf1c08a42442807ea5170d 143 Gene3D G3DSA:3.10.129.10 1 143 3.5E-49 T 14-10-2018 BD65_1742 91bfde9e1fcf1c08a42442807ea5170d 143 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 14 141 3.1E-15 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 BD65_1301 c8571eccb5ecf9e980ab04192e91bcc9 170 Hamap MF_00746 Protein SprT [sprT]. 12 165 40.926 T 14-10-2018 IPR023483 Uncharacterised protein family SprT BD65_1301 c8571eccb5ecf9e980ab04192e91bcc9 170 Pfam PF17283 SprT-like zinc ribbon domain 125 164 1.3E-10 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain BD65_1301 c8571eccb5ecf9e980ab04192e91bcc9 170 SMART SM00731 16 165 1.0E-61 T 14-10-2018 IPR006640 SprT-like BD65_1301 c8571eccb5ecf9e980ab04192e91bcc9 170 Pfam PF10263 SprT-like family 20 119 1.9E-18 T 14-10-2018 IPR006640 SprT-like BD65_836 f3d70d81e7812db7c90121fc0a762da5 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 1.5E-36 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_836 f3d70d81e7812db7c90121fc0a762da5 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 1.5E-36 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_836 f3d70d81e7812db7c90121fc0a762da5 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.5E-36 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_836 f3d70d81e7812db7c90121fc0a762da5 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 1.5E-36 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_836 f3d70d81e7812db7c90121fc0a762da5 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 1.5E-36 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_836 f3d70d81e7812db7c90121fc0a762da5 507 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 496 3.9E-182 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_836 f3d70d81e7812db7c90121fc0a762da5 507 Pfam PF00361 Proton-conducting membrane transporter 134 431 1.0E-70 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_2591 25a278075a3cd4299ddad698d824d06b 178 Pfam PF00156 Phosphoribosyl transferase domain 12 160 3.3E-24 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BD65_2591 25a278075a3cd4299ddad698d824d06b 178 Gene3D G3DSA:3.40.50.2020 1 176 5.2E-66 T 14-10-2018 BD65_2591 25a278075a3cd4299ddad698d824d06b 178 SUPERFAMILY SSF53271 3 174 2.75E-55 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BD65_2591 25a278075a3cd4299ddad698d824d06b 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 9.5E-75 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 BD65_2388 73e8f1f85f6fb05bdd32f775d01f1107 143 SUPERFAMILY SSF89946 3 123 3.4E-41 T 14-10-2018 IPR036701 RraB-like superfamily BD65_2388 73e8f1f85f6fb05bdd32f775d01f1107 143 Pfam PF06877 Regulator of ribonuclease activity B 12 113 1.1E-33 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain BD65_2388 73e8f1f85f6fb05bdd32f775d01f1107 143 PIRSF PIRSF018193 1 143 3.3E-67 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B BD65_2388 73e8f1f85f6fb05bdd32f775d01f1107 143 Gene3D G3DSA:3.30.70.970 1 125 2.4E-49 T 14-10-2018 IPR036701 RraB-like superfamily BD65_2388 73e8f1f85f6fb05bdd32f775d01f1107 143 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.895 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B BD65_1372 12c2f3859b981ba425e94273e0c33d69 385 SUPERFAMILY SSF56796 1 384 6.02E-111 T 14-10-2018 BD65_1372 12c2f3859b981ba425e94273e0c33d69 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 358 3.4E-92 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BD65_1372 12c2f3859b981ba425e94273e0c33d69 385 Gene3D G3DSA:1.20.1090.10 183 385 6.7E-49 T 14-10-2018 BD65_1372 12c2f3859b981ba425e94273e0c33d69 385 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BD65_1372 12c2f3859b981ba425e94273e0c33d69 385 Gene3D G3DSA:3.40.50.1970 1 182 3.1E-49 T 14-10-2018 BD65_1372 12c2f3859b981ba425e94273e0c33d69 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BD65_1109 44f3adfb0f526633e87f8f079318ec39 85 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 23 73 2.1E-20 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA BD65_1163 413d97d0be49f0104a75448bf3614a2b 217 Gene3D G3DSA:1.10.3720.10 1 217 5.5E-62 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1163 413d97d0be49f0104a75448bf3614a2b 217 SUPERFAMILY SSF161098 10 201 1.27E-48 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1163 413d97d0be49f0104a75448bf3614a2b 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 212 2.6E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1254 71fcd9ad5f14d20735a9639f9da821cf 139 SUPERFAMILY SSF46894 42 118 3.51E-5 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_1254 71fcd9ad5f14d20735a9639f9da821cf 139 Gene3D G3DSA:1.10.10.10 25 122 1.7E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_917 2985e42f1b0146f5b83449c20bb0d164 354 Gene3D G3DSA:1.10.530.10 92 347 1.5E-119 T 14-10-2018 BD65_917 2985e42f1b0146f5b83449c20bb0d164 354 Gene3D G3DSA:1.10.8.350 54 227 1.5E-119 T 14-10-2018 BD65_917 2985e42f1b0146f5b83449c20bb0d164 354 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 56 347 1.5E-122 T 14-10-2018 IPR011757 Lytic transglycosylase MltB BD65_917 2985e42f1b0146f5b83449c20bb0d164 354 SUPERFAMILY SSF53955 43 346 3.23E-94 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_917 2985e42f1b0146f5b83449c20bb0d164 354 Pfam PF13406 Transglycosylase SLT domain 52 344 3.3E-93 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 BD65_1447 ef68376d5bb24d2ce1e0eb524b9596ec 409 Pfam PF02353 Mycolic acid cyclopropane synthetase 132 403 1.4E-83 T 14-10-2018 BD65_1447 ef68376d5bb24d2ce1e0eb524b9596ec 409 SUPERFAMILY SSF53335 22 362 3.01E-84 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1447 ef68376d5bb24d2ce1e0eb524b9596ec 409 Gene3D G3DSA:3.40.50.150 140 409 1.3E-100 T 14-10-2018 BD65_1447 ef68376d5bb24d2ce1e0eb524b9596ec 409 PIRSF PIRSF003085 20 409 2.5E-123 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 BD65_1231 6ce865a95050d89534181b97fb24cc56 239 Pfam PF03741 Integral membrane protein TerC family 16 202 1.2E-53 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BD65_78 7596f610964d526a398810a9ab35d374 306 Gene3D G3DSA:3.30.420.40 118 289 8.2E-88 T 14-10-2018 BD65_78 7596f610964d526a398810a9ab35d374 306 SUPERFAMILY SSF53067 1 300 2.34E-56 T 14-10-2018 BD65_78 7596f610964d526a398810a9ab35d374 306 ProSitePatterns PS01125 ROK family signature. 129 156 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_78 7596f610964d526a398810a9ab35d374 306 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 65.153 T 14-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 BD65_78 7596f610964d526a398810a9ab35d374 306 Gene3D G3DSA:3.30.420.40 4 296 8.2E-88 T 14-10-2018 BD65_78 7596f610964d526a398810a9ab35d374 306 Pfam PF00480 ROK family 2 299 5.8E-68 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_3224 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 BD65_3224 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 BD65_3224 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 72 9.2E-36 T 14-10-2018 BD65_3224 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3224 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BD65_3224 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BD65_166 e38aafa70be15d70cf1af2aafaf2dd0e 304 Gene3D G3DSA:3.40.50.720 1 120 5.7E-32 T 14-10-2018 BD65_166 e38aafa70be15d70cf1af2aafaf2dd0e 304 SUPERFAMILY SSF51735 3 138 8.1E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_166 e38aafa70be15d70cf1af2aafaf2dd0e 304 Gene3D G3DSA:3.30.360.10 121 304 6.9E-51 T 14-10-2018 BD65_166 e38aafa70be15d70cf1af2aafaf2dd0e 304 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 2.2E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BD65_166 e38aafa70be15d70cf1af2aafaf2dd0e 304 SUPERFAMILY SSF55347 123 264 1.86E-41 T 14-10-2018 BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 195 211 2.7E-21 T 14-10-2018 BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 221 235 2.7E-21 T 14-10-2018 BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 332 356 2.7E-21 T 14-10-2018 BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 294 306 2.7E-21 T 14-10-2018 BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 Pfam PF12161 HsdM N-terminal domain 10 157 1.6E-15 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 6 500 3.1E-190 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 Gene3D G3DSA:1.20.1260.30 2 189 3.9E-51 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 SUPERFAMILY SSF53335 9 511 3.82E-118 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 Pfam PF02384 N-6 DNA Methylase 171 478 1.9E-112 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 297 303 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BD65_1416 0fd3ae290fdeb9ce61cbf41161788b55 517 Gene3D G3DSA:3.40.50.150 193 472 3.7E-77 T 14-10-2018 BD65_1170 40a5ae5f10f8170eedb59ba487a2f64c 182 SUPERFAMILY SSF52980 2 179 6.43E-71 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BD65_1170 40a5ae5f10f8170eedb59ba487a2f64c 182 SMART SM01322 1 176 2.0E-117 T 14-10-2018 IPR009822 YaeQ BD65_1170 40a5ae5f10f8170eedb59ba487a2f64c 182 PIRSF PIRSF011484 1 180 1.1E-68 T 14-10-2018 IPR009822 YaeQ BD65_1170 40a5ae5f10f8170eedb59ba487a2f64c 182 Gene3D G3DSA:3.10.640.10 1 181 6.0E-76 T 14-10-2018 IPR038590 YaeQ superfamily BD65_1170 40a5ae5f10f8170eedb59ba487a2f64c 182 Pfam PF07152 YaeQ protein 1 173 1.2E-74 T 14-10-2018 IPR009822 YaeQ BD65_1534 420dfe4f86de7119309a66d23e220ccd 88 Gene3D G3DSA:3.30.370.10 1 88 2.0E-36 T 14-10-2018 IPR035905 Barstar-like superfamily BD65_1534 420dfe4f86de7119309a66d23e220ccd 88 Pfam PF01337 Barstar (barnase inhibitor) 5 79 1.8E-10 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) BD65_1534 420dfe4f86de7119309a66d23e220ccd 88 SUPERFAMILY SSF52038 1 87 1.7E-28 T 14-10-2018 IPR035905 Barstar-like superfamily BD65_340 d33aa167137bf748ead9ad15cb04d26b 260 Gene3D G3DSA:3.40.80.10 22 177 1.0E-46 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_340 d33aa167137bf748ead9ad15cb04d26b 260 Gene3D G3DSA:1.10.101.10 178 258 1.0E-25 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BD65_340 d33aa167137bf748ead9ad15cb04d26b 260 SUPERFAMILY SSF47090 179 258 4.39E-19 T 14-10-2018 IPR036365 PGBD-like superfamily BD65_340 d33aa167137bf748ead9ad15cb04d26b 260 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 22 163 7.8E-24 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_340 d33aa167137bf748ead9ad15cb04d26b 260 SMART SM00644 12 163 9.4E-30 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_340 d33aa167137bf748ead9ad15cb04d26b 260 SUPERFAMILY SSF55846 8 179 8.64E-44 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_699 c97e64872805aa633c5b5f7d9451a322 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BD65_699 c97e64872805aa633c5b5f7d9451a322 137 PIRSF PIRSF002889 1 137 5.1E-41 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BD65_699 c97e64872805aa633c5b5f7d9451a322 137 Pfam PF00460 Flagella basal body rod protein 9 39 5.8E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BD65_699 c97e64872805aa633c5b5f7d9451a322 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 2.0E-42 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BD65_681 4d102bef10a338392c393d1aaa55521b 449 Gene3D G3DSA:3.30.750.140 292 407 4.8E-36 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily BD65_681 4d102bef10a338392c393d1aaa55521b 449 Pfam PF02120 Flagellar hook-length control protein FliK 311 393 6.1E-21 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal BD65_681 4d102bef10a338392c393d1aaa55521b 449 PRINTS PR01007 Flagellar hook-length control protein signature 359 382 4.5E-35 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BD65_681 4d102bef10a338392c393d1aaa55521b 449 PRINTS PR01007 Flagellar hook-length control protein signature 344 359 4.5E-35 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BD65_681 4d102bef10a338392c393d1aaa55521b 449 PRINTS PR01007 Flagellar hook-length control protein signature 278 300 4.5E-35 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BD65_681 4d102bef10a338392c393d1aaa55521b 449 PRINTS PR01007 Flagellar hook-length control protein signature 326 344 4.5E-35 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BD65_681 4d102bef10a338392c393d1aaa55521b 449 PRINTS PR01007 Flagellar hook-length control protein signature 83 96 4.5E-35 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BD65_681 4d102bef10a338392c393d1aaa55521b 449 PRINTS PR01007 Flagellar hook-length control protein signature 301 323 4.5E-35 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BD65_2574 8250f367cc7ae84693d18b40dff30901 298 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 294 1.1E-59 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 BD65_2574 8250f367cc7ae84693d18b40dff30901 298 Gene3D G3DSA:3.20.20.70 139 285 4.1E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2574 8250f367cc7ae84693d18b40dff30901 298 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 128 4.8E-24 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 BD65_2574 8250f367cc7ae84693d18b40dff30901 298 PIRSF PIRSF006250 17 298 8.5E-102 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 BD65_2574 8250f367cc7ae84693d18b40dff30901 298 SUPERFAMILY SSF51690 130 295 3.61E-58 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BD65_2574 8250f367cc7ae84693d18b40dff30901 298 Gene3D G3DSA:3.90.1170.20 22 294 4.1E-118 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 BD65_2574 8250f367cc7ae84693d18b40dff30901 298 SUPERFAMILY SSF54675 13 129 5.49E-30 T 14-10-2018 BD65_2574 8250f367cc7ae84693d18b40dff30901 298 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 295 1.0E-95 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 BD65_276 e93f1bc91f5ef6e02e330522f92cb9b3 575 Pfam PF00916 Sulfate permease family 24 382 4.1E-85 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BD65_276 e93f1bc91f5ef6e02e330522f92cb9b3 575 Pfam PF01740 STAS domain 445 531 1.1E-12 T 14-10-2018 IPR002645 STAS domain BD65_276 e93f1bc91f5ef6e02e330522f92cb9b3 575 SUPERFAMILY SSF52091 444 537 9.03E-11 T 14-10-2018 IPR036513 STAS domain superfamily BD65_276 e93f1bc91f5ef6e02e330522f92cb9b3 575 Gene3D G3DSA:3.30.750.24 436 564 9.2E-20 T 14-10-2018 IPR036513 STAS domain superfamily BD65_2544 b779dbc986cc603837f5b19b7e29b8e8 164 Gene3D G3DSA:3.30.70.1150 81 158 1.0E-26 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal BD65_2544 b779dbc986cc603837f5b19b7e29b8e8 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 77 6.0E-36 T 14-10-2018 BD65_2544 b779dbc986cc603837f5b19b7e29b8e8 164 Gene3D G3DSA:3.30.70.260 1 80 3.5E-35 T 14-10-2018 BD65_2544 b779dbc986cc603837f5b19b7e29b8e8 164 Pfam PF10369 Small subunit of acetolactate synthase 85 159 3.3E-23 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BD65_2544 b779dbc986cc603837f5b19b7e29b8e8 164 SUPERFAMILY SSF55021 3 75 4.23E-22 T 14-10-2018 BD65_2544 b779dbc986cc603837f5b19b7e29b8e8 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 160 3.2E-67 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BD65_2544 b779dbc986cc603837f5b19b7e29b8e8 164 SUPERFAMILY SSF55021 80 163 1.72E-25 T 14-10-2018 BD65_2544 b779dbc986cc603837f5b19b7e29b8e8 164 Pfam PF01842 ACT domain 5 69 3.1E-15 T 14-10-2018 IPR002912 ACT domain BD65_3149 a99ac270f26ec4db5d90d514769461db 299 Gene3D G3DSA:3.40.190.10 171 270 3.0E-64 T 14-10-2018 BD65_3149 a99ac270f26ec4db5d90d514769461db 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_3149 a99ac270f26ec4db5d90d514769461db 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_3149 a99ac270f26ec4db5d90d514769461db 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_3149 a99ac270f26ec4db5d90d514769461db 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_3149 a99ac270f26ec4db5d90d514769461db 299 SUPERFAMILY SSF46785 5 83 5.45E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_3149 a99ac270f26ec4db5d90d514769461db 299 Gene3D G3DSA:3.40.190.10 90 295 3.0E-64 T 14-10-2018 BD65_3149 a99ac270f26ec4db5d90d514769461db 299 Pfam PF03466 LysR substrate binding domain 96 299 4.7E-26 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_3149 a99ac270f26ec4db5d90d514769461db 299 SUPERFAMILY SSF53850 90 297 5.88E-45 T 14-10-2018 BD65_3149 a99ac270f26ec4db5d90d514769461db 299 Gene3D G3DSA:1.10.10.10 1 86 1.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1758 3c02264e1f0552e50bb147884e645a54 246 SUPERFAMILY SSF69618 1 245 3.01E-54 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1758 3c02264e1f0552e50bb147884e645a54 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 1.4E-42 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BD65_1758 3c02264e1f0552e50bb147884e645a54 246 Gene3D G3DSA:3.40.50.10090 32 165 8.9E-69 T 14-10-2018 BD65_1758 3c02264e1f0552e50bb147884e645a54 246 Gene3D G3DSA:3.40.50.10090 4 245 8.9E-69 T 14-10-2018 BD65_270 13624e8540f050d105890c11c31340bc 149 SUPERFAMILY SSF49401 31 148 1.39E-38 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_270 13624e8540f050d105890c11c31340bc 149 Pfam PF05775 Enterobacteria AfaD invasin protein 42 143 1.7E-23 T 14-10-2018 IPR008394 Enterobacteria AfaD invasin BD65_270 13624e8540f050d105890c11c31340bc 149 Gene3D G3DSA:2.60.40.1950 20 149 6.9E-39 T 14-10-2018 BD65_249 e026e6584e28f431b34d20005ee155b4 199 SUPERFAMILY SSF52540 1 141 1.54E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_249 e026e6584e28f431b34d20005ee155b4 199 Pfam PF00265 Thymidine kinase 2 186 3.2E-63 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BD65_249 e026e6584e28f431b34d20005ee155b4 199 PIRSF PIRSF035805 1 198 7.4E-59 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BD65_249 e026e6584e28f431b34d20005ee155b4 199 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BD65_249 e026e6584e28f431b34d20005ee155b4 199 Gene3D G3DSA:3.30.60.20 144 191 3.5E-10 T 14-10-2018 BD65_249 e026e6584e28f431b34d20005ee155b4 199 SUPERFAMILY SSF57716 142 193 5.23E-18 T 14-10-2018 BD65_249 e026e6584e28f431b34d20005ee155b4 199 Gene3D G3DSA:3.40.50.300 1 141 3.7E-26 T 14-10-2018 BD65_249 e026e6584e28f431b34d20005ee155b4 199 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.426 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BD65_1494 7579871bae2fa0386994ddd1e0f0c438 164 PIRSF PIRSF005276 1 164 8.7E-59 T 14-10-2018 IPR007481 Stringent starvation protein B BD65_1494 7579871bae2fa0386994ddd1e0f0c438 164 SUPERFAMILY SSF101738 1 107 3.53E-48 T 14-10-2018 IPR036760 SspB-like superfamily BD65_1494 7579871bae2fa0386994ddd1e0f0c438 164 Pfam PF04386 Stringent starvation protein B 4 164 5.5E-41 T 14-10-2018 IPR007481 Stringent starvation protein B BD65_1494 7579871bae2fa0386994ddd1e0f0c438 164 Gene3D G3DSA:2.30.30.220 1 123 6.1E-51 T 14-10-2018 IPR036760 SspB-like superfamily BD65_1342 2ce71ca988d9ec72b8ceac66d7b2411e 346 Gene3D G3DSA:3.40.50.1980 53 170 2.0E-30 T 14-10-2018 BD65_1342 2ce71ca988d9ec72b8ceac66d7b2411e 346 Gene3D G3DSA:3.40.50.1980 171 346 1.2E-62 T 14-10-2018 BD65_1342 2ce71ca988d9ec72b8ceac66d7b2411e 346 Pfam PF01497 Periplasmic binding protein 74 322 1.6E-22 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain BD65_1342 2ce71ca988d9ec72b8ceac66d7b2411e 346 SUPERFAMILY SSF53807 56 342 5.89E-43 T 14-10-2018 BD65_849 4b5e87376fb6c40add6778991e56fc48 404 Gene3D G3DSA:3.40.640.10 53 294 9.2E-148 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_849 4b5e87376fb6c40add6778991e56fc48 404 SUPERFAMILY SSF53383 7 401 4.89E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_849 4b5e87376fb6c40add6778991e56fc48 404 Pfam PF00155 Aminotransferase class I and II 58 387 9.4E-47 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BD65_849 4b5e87376fb6c40add6778991e56fc48 404 Gene3D G3DSA:3.90.1150.10 21 398 9.2E-148 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 Gene3D G3DSA:1.10.3860.10 1 427 4.1E-137 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 1.7E-52 T 14-10-2018 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 1.7E-52 T 14-10-2018 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 1.7E-52 T 14-10-2018 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.7E-52 T 14-10-2018 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.7E-52 T 14-10-2018 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 1.7E-52 T 14-10-2018 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 1.7E-52 T 14-10-2018 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.7E-52 T 14-10-2018 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 SUPERFAMILY SSF118215 8 412 1.57E-124 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 1.3E-117 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 45.591 T 14-10-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 BD65_2255 6120b939e79490e0ab8546504aa82ee2 438 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BD65_337 71b0d4edad033ffbf29789c07fd7b875 125 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 36 125 5.0E-34 T 14-10-2018 IPR009700 Protein of unknown function DUF1283 BD65_337 71b0d4edad033ffbf29789c07fd7b875 125 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 1 125 28.673 T 14-10-2018 IPR009700 Protein of unknown function DUF1283 BD65_337 71b0d4edad033ffbf29789c07fd7b875 125 Pfam PF06932 Protein of unknown function (DUF1283) 41 125 1.4E-37 T 14-10-2018 IPR009700 Protein of unknown function DUF1283 BD65_3019 ffcd9bde3e7c33c5b7cd1a3b84f6a8fc 247 Gene3D G3DSA:3.40.1390.30 14 232 3.8E-85 T 14-10-2018 BD65_3019 ffcd9bde3e7c33c5b7cd1a3b84f6a8fc 247 Gene3D G3DSA:3.40.1390.30 97 218 3.8E-85 T 14-10-2018 BD65_3019 ffcd9bde3e7c33c5b7cd1a3b84f6a8fc 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 10 233 1.1E-54 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BD65_3019 ffcd9bde3e7c33c5b7cd1a3b84f6a8fc 247 SUPERFAMILY SSF102705 1 246 3.14E-80 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily BD65_3019 ffcd9bde3e7c33c5b7cd1a3b84f6a8fc 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 5.1E-70 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BD65_2822 01b36d22b4c45fe4ad3d5306c5f95572 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.294 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BD65_2822 01b36d22b4c45fe4ad3d5306c5f95572 295 Gene3D G3DSA:1.10.357.140 13 180 2.3E-18 T 14-10-2018 BD65_2822 01b36d22b4c45fe4ad3d5306c5f95572 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 2.5E-91 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BD65_2822 01b36d22b4c45fe4ad3d5306c5f95572 295 Pfam PF01040 UbiA prenyltransferase family 18 267 4.7E-59 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BD65_2822 01b36d22b4c45fe4ad3d5306c5f95572 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 PIRSF PIRSF039144 1 112 3.5E-58 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.9E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 Gene3D G3DSA:3.30.70.120 1 112 1.2E-48 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 SUPERFAMILY SSF54913 1 112 7.31E-47 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 SMART SM00938 4 105 3.4E-68 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 BD65_1064 feb63d2a5285b8e167e8bfe54626fa00 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BD65_3110 7b611943b28c93b8ac2dbd1fd31fdcf8 312 Gene3D G3DSA:3.40.50.300 1 249 7.1E-77 T 14-10-2018 BD65_3110 7b611943b28c93b8ac2dbd1fd31fdcf8 312 SUPERFAMILY SSF52540 1 240 6.65E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3110 7b611943b28c93b8ac2dbd1fd31fdcf8 312 Pfam PF00005 ABC transporter 17 163 5.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3110 7b611943b28c93b8ac2dbd1fd31fdcf8 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_3110 7b611943b28c93b8ac2dbd1fd31fdcf8 312 SMART SM00382 26 213 2.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1600 b58fa7574256fce9825ccf127dfa978c 2121 SUPERFAMILY SSF53448 1755 2111 5.06E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_1600 b58fa7574256fce9825ccf127dfa978c 2121 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 1922 1966 6.3E-6 T 14-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif BD65_1600 b58fa7574256fce9825ccf127dfa978c 2121 Gene3D G3DSA:3.90.550.20 1811 2102 1.6E-128 T 14-10-2018 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 SUPERFAMILY SSF53244 312 449 3.01E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 3.3E-9 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.088 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 Gene3D G3DSA:3.90.190.20 314 451 9.5E-30 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.0E-259 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 Gene3D G3DSA:3.40.1190.10 91 313 3.9E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 Gene3D G3DSA:3.40.50.720 1 90 7.2E-35 T 14-10-2018 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 Pfam PF01225 Mur ligase family, catalytic domain 2 98 3.8E-18 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 SUPERFAMILY SSF51984 1 90 3.27E-23 T 14-10-2018 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 SUPERFAMILY SSF53623 95 308 1.15E-49 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BD65_2330 11614aa78ed829d1c651346a54b5cada 459 Pfam PF08245 Mur ligase middle domain 108 291 8.7E-19 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BD65_3037 080e7ed8869d579e1f77165ec7f7247e 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.2E-187 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BD65_3037 080e7ed8869d579e1f77165ec7f7247e 379 PIRSF PIRSF000267 2 378 1.0E-128 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BD65_3037 080e7ed8869d579e1f77165ec7f7247e 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 3.0E-109 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BD65_1826 da571fc6a58462d10a73dbefd0f36a20 381 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 375 6.8E-155 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 BD65_1826 da571fc6a58462d10a73dbefd0f36a20 381 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 380 65.051 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 BD65_1826 da571fc6a58462d10a73dbefd0f36a20 381 Pfam PF01546 Peptidase family M20/M25/M40 74 376 1.8E-33 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 BD65_1826 da571fc6a58462d10a73dbefd0f36a20 381 Gene3D G3DSA:3.30.70.360 179 299 2.3E-80 T 14-10-2018 BD65_1826 da571fc6a58462d10a73dbefd0f36a20 381 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 108 145 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BD65_1826 da571fc6a58462d10a73dbefd0f36a20 381 Pfam PF07687 Peptidase dimerisation domain 176 286 1.9E-24 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain BD65_1826 da571fc6a58462d10a73dbefd0f36a20 381 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BD65_1826 da571fc6a58462d10a73dbefd0f36a20 381 Gene3D G3DSA:3.40.630.10 10 362 2.3E-80 T 14-10-2018 BD65_1826 da571fc6a58462d10a73dbefd0f36a20 381 SUPERFAMILY SSF55031 179 293 2.54E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BD65_1826 da571fc6a58462d10a73dbefd0f36a20 381 SUPERFAMILY SSF53187 4 380 6.86E-58 T 14-10-2018 BD65_2960 28008d123dc9717e9bbda8b2263d37a7 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 156.75 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BD65_2960 28008d123dc9717e9bbda8b2263d37a7 321 Pfam PF04055 Radical SAM superfamily 91 251 1.1E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_2960 28008d123dc9717e9bbda8b2263d37a7 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 27 73 6.4E-7 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BD65_2960 28008d123dc9717e9bbda8b2263d37a7 321 PIRSF PIRSF005963 2 321 1.7E-131 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BD65_2960 28008d123dc9717e9bbda8b2263d37a7 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 1.4E-159 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BD65_2960 28008d123dc9717e9bbda8b2263d37a7 321 SMART SM00729 84 293 2.3E-16 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BD65_2960 28008d123dc9717e9bbda8b2263d37a7 321 Gene3D G3DSA:3.20.20.70 82 293 3.2E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2960 28008d123dc9717e9bbda8b2263d37a7 321 SUPERFAMILY SSF102114 53 317 2.22E-69 T 14-10-2018 BD65_335 d8f05c6d01eee0ae5c2424fac49464e1 426 Pfam PF00654 Voltage gated chloride channel 73 416 4.1E-77 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_335 d8f05c6d01eee0ae5c2424fac49464e1 426 Gene3D G3DSA:1.10.3080.10 8 426 2.6E-77 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 BD65_335 d8f05c6d01eee0ae5c2424fac49464e1 426 PRINTS PR00762 Chloride channel signature 383 402 6.6E-24 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_335 d8f05c6d01eee0ae5c2424fac49464e1 426 PRINTS PR00762 Chloride channel signature 166 185 6.6E-24 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_335 d8f05c6d01eee0ae5c2424fac49464e1 426 PRINTS PR00762 Chloride channel signature 365 381 6.6E-24 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_335 d8f05c6d01eee0ae5c2424fac49464e1 426 PRINTS PR00762 Chloride channel signature 330 350 6.6E-24 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_335 d8f05c6d01eee0ae5c2424fac49464e1 426 PRINTS PR00762 Chloride channel signature 116 135 6.6E-24 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BD65_335 d8f05c6d01eee0ae5c2424fac49464e1 426 SUPERFAMILY SSF81340 5 425 1.83E-87 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 BD65_4 363c94d84e44ed9938899c5752539d32 369 SUPERFAMILY SSF54292 282 366 1.31E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BD65_4 363c94d84e44ed9938899c5752539d32 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 291 361 4.5E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BD65_4 363c94d84e44ed9938899c5752539d32 369 SUPERFAMILY SSF141673 4 132 2.75E-27 T 14-10-2018 BD65_4 363c94d84e44ed9938899c5752539d32 369 Gene3D G3DSA:3.10.20.30 273 368 5.8E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_4 363c94d84e44ed9938899c5752539d32 369 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 5.0E-26 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 BD65_4 363c94d84e44ed9938899c5752539d32 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 322 330 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BD65_4 363c94d84e44ed9938899c5752539d32 369 SUPERFAMILY SSF50800 4 263 4.13E-16 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BD65_4 363c94d84e44ed9938899c5752539d32 369 Pfam PF03473 MOSC domain 139 261 1.1E-28 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 BD65_1972 8872135d21a36ca18374265d555fe0c4 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 3.1E-49 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BD65_1972 8872135d21a36ca18374265d555fe0c4 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.074 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 BD65_1972 8872135d21a36ca18374265d555fe0c4 139 Gene3D G3DSA:3.40.1650.10 8 136 7.7E-39 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BD65_1972 8872135d21a36ca18374265d555fe0c4 139 SUPERFAMILY SSF102546 1 139 9.42E-46 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BD65_2031 cdd5b290d4eeb8e53651e1fde5990ae8 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 140 9.0E-15 T 14-10-2018 IPR000182 GNAT domain BD65_2031 cdd5b290d4eeb8e53651e1fde5990ae8 150 SUPERFAMILY SSF55729 1 133 3.06E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2031 cdd5b290d4eeb8e53651e1fde5990ae8 150 Gene3D G3DSA:3.40.630.30 1 142 1.3E-31 T 14-10-2018 BD65_1092 34953b776f23afcc90da82acf94defc6 220 SMART SM00248 110 139 7.2 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BD65_1092 34953b776f23afcc90da82acf94defc6 220 SMART SM00248 43 72 98.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BD65_1092 34953b776f23afcc90da82acf94defc6 220 SMART SM00248 143 172 0.077 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BD65_1092 34953b776f23afcc90da82acf94defc6 220 SMART SM00248 76 105 1.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BD65_1092 34953b776f23afcc90da82acf94defc6 220 Pfam PF12796 Ankyrin repeats (3 copies) 81 174 1.2E-8 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain BD65_1092 34953b776f23afcc90da82acf94defc6 220 Gene3D G3DSA:1.25.40.20 12 217 8.0E-34 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BD65_1092 34953b776f23afcc90da82acf94defc6 220 SUPERFAMILY SSF48403 15 206 3.37E-34 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BD65_1300 d0bb9205d5642b165386388f9f8f574f 99 SMART SM00418 15 93 2.5E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BD65_1300 d0bb9205d5642b165386388f9f8f574f 99 Gene3D G3DSA:1.10.10.10 3 96 2.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1300 d0bb9205d5642b165386388f9f8f574f 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 9.9E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BD65_1300 d0bb9205d5642b165386388f9f8f574f 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 9.9E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BD65_1300 d0bb9205d5642b165386388f9f8f574f 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 9.9E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BD65_1300 d0bb9205d5642b165386388f9f8f574f 99 SUPERFAMILY SSF46785 10 96 5.62E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1300 d0bb9205d5642b165386388f9f8f574f 99 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 2.3E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.0E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 1.0E-135 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 Gene3D G3DSA:1.20.210.10 30 565 4.9E-190 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 SUPERFAMILY SSF81442 43 560 3.27E-179 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 14-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 BD65_2825 c022cfa42bc07b171956a7840ab5b77d 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BD65_587 d9505e69f96380fb18f619ac1b4caaf1 91 Pfam PF13974 YebO-like protein 16 91 2.3E-29 T 14-10-2018 IPR025594 YebO-like protein BD65_562 3bc1eb73bfdd16a5138ba123b82a625d 322 SUPERFAMILY SSF53062 3 128 3.01E-36 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BD65_562 3bc1eb73bfdd16a5138ba123b82a625d 322 Gene3D G3DSA:3.40.35.10 159 322 3.8E-62 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 BD65_562 3bc1eb73bfdd16a5138ba123b82a625d 322 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 115 2.8E-44 T 14-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 BD65_562 3bc1eb73bfdd16a5138ba123b82a625d 322 Pfam PF03610 PTS system fructose IIA component 5 115 2.2E-32 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 BD65_562 3bc1eb73bfdd16a5138ba123b82a625d 322 Gene3D G3DSA:3.40.50.510 2 135 6.1E-41 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BD65_562 3bc1eb73bfdd16a5138ba123b82a625d 322 Pfam PF03830 PTS system sorbose subfamily IIB component 164 310 2.0E-57 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 BD65_562 3bc1eb73bfdd16a5138ba123b82a625d 322 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 164 310 2.5E-58 T 14-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 BD65_562 3bc1eb73bfdd16a5138ba123b82a625d 322 SUPERFAMILY SSF52728 162 321 9.02E-57 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 BD65_2602 e48e7ebf611fae039bc107fa1fd6563d 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 6.3E-51 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BD65_2602 e48e7ebf611fae039bc107fa1fd6563d 151 SUPERFAMILY SSF109635 9 110 8.24E-37 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily BD65_2602 e48e7ebf611fae039bc107fa1fd6563d 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 14-10-2018 BD65_2602 e48e7ebf611fae039bc107fa1fd6563d 151 Gene3D G3DSA:1.20.120.910 20 150 1.7E-35 T 14-10-2018 BD65_2602 e48e7ebf611fae039bc107fa1fd6563d 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BD65_2602 e48e7ebf611fae039bc107fa1fd6563d 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BD65_2602 e48e7ebf611fae039bc107fa1fd6563d 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BD65_2602 e48e7ebf611fae039bc107fa1fd6563d 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.578 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BD65_2602 e48e7ebf611fae039bc107fa1fd6563d 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 3.1E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BD65_1322 c9279b5c207ec341613adaa63496d1ac 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 9.0E-36 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BD65_1322 c9279b5c207ec341613adaa63496d1ac 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.967 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BD65_1322 c9279b5c207ec341613adaa63496d1ac 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 6.7E-40 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BD65_1322 c9279b5c207ec341613adaa63496d1ac 90 Gene3D G3DSA:1.10.3880.10 1 90 9.3E-38 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 BD65_1322 c9279b5c207ec341613adaa63496d1ac 90 SUPERFAMILY SSF111148 1 89 6.54E-40 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 BD65_1322 c9279b5c207ec341613adaa63496d1ac 90 PIRSF PIRSF029827 1 90 3.7E-44 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BD65_20 5a14401facbc5471d3b1ed613ce3416c 152 Pfam PF02142 MGS-like domain 26 118 4.4E-20 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BD65_20 5a14401facbc5471d3b1ed613ce3416c 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BD65_20 5a14401facbc5471d3b1ed613ce3416c 152 PIRSF PIRSF006614 8 151 5.4E-66 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BD65_20 5a14401facbc5471d3b1ed613ce3416c 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 5.4E-69 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BD65_20 5a14401facbc5471d3b1ed613ce3416c 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 33.144 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BD65_20 5a14401facbc5471d3b1ed613ce3416c 152 SUPERFAMILY SSF52335 6 151 3.27E-59 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BD65_20 5a14401facbc5471d3b1ed613ce3416c 152 SMART SM00851 25 118 1.4E-28 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BD65_20 5a14401facbc5471d3b1ed613ce3416c 152 Gene3D G3DSA:3.40.50.1380 1 152 1.4E-69 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BD65_2071 86a174083bf5f6542da9e7dbff603667 508 Pfam PF05231 MASE1 7 281 7.3E-15 T 14-10-2018 IPR007895 MASE1 BD65_2071 86a174083bf5f6542da9e7dbff603667 508 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 499 1.8E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2071 86a174083bf5f6542da9e7dbff603667 508 Gene3D G3DSA:3.30.565.10 386 500 2.4E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2071 86a174083bf5f6542da9e7dbff603667 508 Pfam PF07730 Histidine kinase 309 373 7.7E-10 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BD65_2071 86a174083bf5f6542da9e7dbff603667 508 SMART SM00387 412 502 4.9E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_2071 86a174083bf5f6542da9e7dbff603667 508 SUPERFAMILY SSF55874 385 499 1.05E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_1638 4d5ddde9330dd55384b91d859915c224 236 Pfam PF04493 Endonuclease V 18 207 1.5E-71 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 BD65_1638 4d5ddde9330dd55384b91d859915c224 236 Gene3D G3DSA:3.30.2170.10 1 215 5.8E-81 T 14-10-2018 BD65_1638 4d5ddde9330dd55384b91d859915c224 236 Hamap MF_00801 Endonuclease V [nfi]. 3 217 33.261 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 BD65_515 105fbd53cebac64fb8d9ddf04a03a7b5 276 SUPERFAMILY SSF47090 201 275 1.96E-21 T 14-10-2018 IPR036365 PGBD-like superfamily BD65_515 105fbd53cebac64fb8d9ddf04a03a7b5 276 SUPERFAMILY SSF55846 24 194 4.19E-52 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_515 105fbd53cebac64fb8d9ddf04a03a7b5 276 SMART SM00644 32 178 3.1E-24 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_515 105fbd53cebac64fb8d9ddf04a03a7b5 276 Pfam PF01471 Putative peptidoglycan binding domain 214 265 1.0E-6 T 14-10-2018 IPR002477 Peptidoglycan binding-like BD65_515 105fbd53cebac64fb8d9ddf04a03a7b5 276 Gene3D G3DSA:1.10.101.10 193 276 8.5E-28 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BD65_515 105fbd53cebac64fb8d9ddf04a03a7b5 276 Gene3D G3DSA:3.40.80.10 42 192 8.6E-48 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_515 105fbd53cebac64fb8d9ddf04a03a7b5 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 41 179 3.0E-26 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_2883 6e8539c937b66396d637569af726ca98 173 Gene3D G3DSA:2.60.120.10 11 133 1.5E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_2883 6e8539c937b66396d637569af726ca98 173 SUPERFAMILY SSF51182 38 140 6.29E-13 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BD65_2883 6e8539c937b66396d637569af726ca98 173 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 7 137 6.2E-40 T 14-10-2018 IPR027565 Cupin fold metalloprotein, WbuC family BD65_2032 93018d163f70066a68906a4db6108f09 190 SUPERFAMILY SSF48150 4 188 2.04E-82 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BD65_2032 93018d163f70066a68906a4db6108f09 190 Gene3D G3DSA:1.10.340.30 3 189 5.5E-87 T 14-10-2018 BD65_2032 93018d163f70066a68906a4db6108f09 190 Pfam PF03352 Methyladenine glycosylase 8 184 3.9E-81 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 BD65_2032 93018d163f70066a68906a4db6108f09 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 183 3.0E-85 T 14-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 BD65_54 835cad8a993fd70baac3a9aef257d5f8 344 Gene3D G3DSA:3.40.718.10 3 343 8.3E-123 T 14-10-2018 BD65_54 835cad8a993fd70baac3a9aef257d5f8 344 Pfam PF02504 Fatty acid synthesis protein 5 331 5.2E-119 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 BD65_54 835cad8a993fd70baac3a9aef257d5f8 344 SUPERFAMILY SSF53659 5 340 9.87E-104 T 14-10-2018 BD65_54 835cad8a993fd70baac3a9aef257d5f8 344 PIRSF PIRSF002465 2 344 2.8E-125 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BD65_54 835cad8a993fd70baac3a9aef257d5f8 344 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 342 1.5E-134 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BD65_54 835cad8a993fd70baac3a9aef257d5f8 344 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 143.49 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BD65_1645 79dbb50f52773162a948807dd87447fb 66 SUPERFAMILY SSF54285 2 66 1.0E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BD65_1645 79dbb50f52773162a948807dd87447fb 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 6.5E-20 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis BD65_1645 79dbb50f52773162a948807dd87447fb 66 Pfam PF02597 ThiS family 7 66 1.3E-14 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BD65_1645 79dbb50f52773162a948807dd87447fb 66 Gene3D G3DSA:3.10.20.30 1 66 8.0E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_1365 33dd79ed543473edb2cadca870e4b08b 193 Pfam PF16964 Putative tight adherence pilin protein F 11 193 6.8E-33 T 14-10-2018 IPR031582 Putative tight adherence pilin protein F BD65_1484 470dd4980ba41673f80d014c37cca2d6 192 SMART SM00749 52 115 1.9E-11 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria BD65_1484 470dd4980ba41673f80d014c37cca2d6 192 SMART SM00749 130 192 8.7E-4 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria BD65_1484 470dd4980ba41673f80d014c37cca2d6 192 Pfam PF04972 BON domain 125 191 6.3E-17 T 14-10-2018 IPR007055 BON domain BD65_1484 470dd4980ba41673f80d014c37cca2d6 192 Pfam PF04972 BON domain 47 114 3.4E-14 T 14-10-2018 IPR007055 BON domain BD65_1075 662d5253eb35bc5486ba9bc6a74a94cf 295 Gene3D G3DSA:3.40.50.10490 1 218 2.3E-85 T 14-10-2018 BD65_1075 662d5253eb35bc5486ba9bc6a74a94cf 295 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 BD65_1075 662d5253eb35bc5486ba9bc6a74a94cf 295 Pfam PF01380 SIS domain 128 208 2.1E-10 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_1075 662d5253eb35bc5486ba9bc6a74a94cf 295 Gene3D G3DSA:1.10.8.1080 219 295 5.1E-29 T 14-10-2018 BD65_1075 662d5253eb35bc5486ba9bc6a74a94cf 295 SUPERFAMILY SSF53697 4 247 1.11E-75 T 14-10-2018 BD65_1075 662d5253eb35bc5486ba9bc6a74a94cf 295 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.66 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 BD65_1075 662d5253eb35bc5486ba9bc6a74a94cf 295 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 1.8E-129 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 BD65_1113 4d9e7da665dd71f0694e8639a04c9b17 113 Pfam PF17345 Family of unknown function (DUF5375) 7 105 9.4E-25 T 14-10-2018 IPR035317 Protein of unknown function DUF5375 BD65_1113 4d9e7da665dd71f0694e8639a04c9b17 113 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 9 106 5.0E-18 T 14-10-2018 IPR035317 Protein of unknown function DUF5375 BD65_1947 273d304a409bda8ade29e06282eb0967 294 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 276 2.5E-92 T 14-10-2018 IPR017039 Virulence factor BrkB BD65_1947 273d304a409bda8ade29e06282eb0967 294 Pfam PF03631 Virulence factor BrkB 29 276 1.8E-54 T 14-10-2018 IPR017039 Virulence factor BrkB BD65_1947 273d304a409bda8ade29e06282eb0967 294 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 17 286 23.204 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial BD65_1947 273d304a409bda8ade29e06282eb0967 294 PIRSF PIRSF035875 2 294 6.0E-62 T 14-10-2018 IPR017039 Virulence factor BrkB BD65_2807 6c330f7535b39ddaf2ba462dc9692046 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 131 5.1E-46 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 BD65_2807 6c330f7535b39ddaf2ba462dc9692046 138 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 23.44 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 BD65_2807 6c330f7535b39ddaf2ba462dc9692046 138 Pfam PF01029 NusB family 7 131 1.9E-35 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BD65_2807 6c330f7535b39ddaf2ba462dc9692046 138 SUPERFAMILY SSF48013 3 132 1.7E-42 T 14-10-2018 IPR035926 NusB-like superfamily BD65_2807 6c330f7535b39ddaf2ba462dc9692046 138 Gene3D G3DSA:1.10.940.10 1 138 4.9E-53 T 14-10-2018 IPR035926 NusB-like superfamily BD65_1791 e88afd210930b0c79673ae45d1a97091 85 Pfam PF13710 ACT domain 13 73 1.1E-25 T 14-10-2018 BD65_1791 e88afd210930b0c79673ae45d1a97091 85 SUPERFAMILY SSF55021 3 75 5.6E-12 T 14-10-2018 BD65_1791 e88afd210930b0c79673ae45d1a97091 85 Gene3D G3DSA:3.30.70.260 1 84 2.5E-8 T 14-10-2018 BD65_2685 17f1ad3669ef6213b1b5faccbbfe8f6a 461 Pfam PF00102 Protein-tyrosine phosphatase 221 402 3.6E-17 T 14-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 BD65_2685 17f1ad3669ef6213b1b5faccbbfe8f6a 461 SMART SM00194 76 410 2.7E-6 T 14-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 BD65_2685 17f1ad3669ef6213b1b5faccbbfe8f6a 461 SUPERFAMILY SSF52799 217 404 1.7E-20 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like BD65_2685 17f1ad3669ef6213b1b5faccbbfe8f6a 461 Gene3D G3DSA:3.90.190.10 194 410 5.1E-24 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like BD65_2685 17f1ad3669ef6213b1b5faccbbfe8f6a 461 SMART SM00404 307 408 1.4E-8 T 14-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic BD65_1688 78a1cb2833e9e90a988567eea2f5aa74 202 SUPERFAMILY SSF55718 10 113 1.38E-7 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BD65_1688 78a1cb2833e9e90a988567eea2f5aa74 202 Pfam PF02036 SCP-2 sterol transfer family 15 113 5.1E-21 T 14-10-2018 IPR003033 SCP2 sterol-binding domain BD65_557 9ef70cf8a08a19decde2af75458104d9 427 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 76 416 7.6E-122 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 BD65_557 9ef70cf8a08a19decde2af75458104d9 427 Pfam PF04715 Anthranilate synthase component I, N terminal region 1 123 2.2E-23 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_557 9ef70cf8a08a19decde2af75458104d9 427 SUPERFAMILY SSF56322 1 421 7.72E-141 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BD65_557 9ef70cf8a08a19decde2af75458104d9 427 Pfam PF00425 chorismate binding enzyme 160 413 3.4E-93 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BD65_557 9ef70cf8a08a19decde2af75458104d9 427 Gene3D G3DSA:3.60.120.10 1 422 3.5E-167 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BD65_557 9ef70cf8a08a19decde2af75458104d9 427 PRINTS PR00095 Anthranilate synthase component I signature 370 384 1.3E-16 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_557 9ef70cf8a08a19decde2af75458104d9 427 PRINTS PR00095 Anthranilate synthase component I signature 275 288 1.3E-16 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_557 9ef70cf8a08a19decde2af75458104d9 427 PRINTS PR00095 Anthranilate synthase component I signature 261 274 1.3E-16 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_557 9ef70cf8a08a19decde2af75458104d9 427 PRINTS PR00095 Anthranilate synthase component I signature 355 369 1.3E-16 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BD65_1143 3cb4c8bd0abbf3a35671d8b9b7e094b6 382 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 189 354 1.0E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1143 3cb4c8bd0abbf3a35671d8b9b7e094b6 382 SUPERFAMILY SSF161098 168 350 7.19E-43 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1143 3cb4c8bd0abbf3a35671d8b9b7e094b6 382 Gene3D G3DSA:1.10.3720.10 166 355 1.8E-37 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2220 6fccf2381e231854536d5445b8f3f225 179 Gene3D G3DSA:3.30.1440.10 1 179 2.4E-81 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2220 6fccf2381e231854536d5445b8f3f225 179 SUPERFAMILY SSF55282 4 179 6.83E-79 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2220 6fccf2381e231854536d5445b8f3f225 179 PIRSF PIRSF002161 1 179 6.2E-67 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2220 6fccf2381e231854536d5445b8f3f225 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.008 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2220 6fccf2381e231854536d5445b8f3f225 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 4.9E-41 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2220 6fccf2381e231854536d5445b8f3f225 179 Pfam PF00281 Ribosomal protein L5 24 80 1.1E-28 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2220 6fccf2381e231854536d5445b8f3f225 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BD65_2886 8a51d5a5f5a466b774117cdca3f3478a 291 Gene3D G3DSA:3.40.50.720 2 282 5.0E-40 T 14-10-2018 BD65_2886 8a51d5a5f5a466b774117cdca3f3478a 291 SUPERFAMILY SSF51735 4 286 5.47E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2886 8a51d5a5f5a466b774117cdca3f3478a 291 Pfam PF04321 RmlD substrate binding domain 4 164 5.5E-22 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 BD65_1817 e7d3f4a1dc35d86699b441a333438451 283 PRINTS PR01374 Gram-negative bacterial tonB protein signature 213 231 2.7E-5 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BD65_1817 e7d3f4a1dc35d86699b441a333438451 283 PRINTS PR01374 Gram-negative bacterial tonB protein signature 113 123 2.7E-5 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BD65_1817 e7d3f4a1dc35d86699b441a333438451 283 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 198 275 2.8E-12 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 BD65_1817 e7d3f4a1dc35d86699b441a333438451 283 Gene3D G3DSA:3.30.1150.10 113 278 9.3E-28 T 14-10-2018 BD65_1817 e7d3f4a1dc35d86699b441a333438451 283 SUPERFAMILY SSF74653 116 277 4.45E-21 T 14-10-2018 BD65_1817 e7d3f4a1dc35d86699b441a333438451 283 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 198 276 1.9E-17 T 14-10-2018 IPR006260 TonB/TolA, C-terminal BD65_403 4240f7f16b066c7d7af3b7b697121d4d 80 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 16 66 3.2E-20 T 14-10-2018 IPR014321 Phage shock protein, PspD BD65_403 4240f7f16b066c7d7af3b7b697121d4d 80 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 12 70 7.2E-24 T 14-10-2018 IPR014321 Phage shock protein, PspD BD65_2965 e4d986707204b57766aa90d8ec87fd92 370 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 11 366 28.836 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2965 e4d986707204b57766aa90d8ec87fd92 370 Pfam PF01098 Cell cycle protein 22 364 1.5E-121 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2965 e4d986707204b57766aa90d8ec87fd92 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 8.7E-136 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_2965 e4d986707204b57766aa90d8ec87fd92 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_1422 61927c23d0b2726cdd08c1661d85d004 632 ProDom PD062361 VC1766 YFJM PM0595 559 632 3.0E-22 T 14-10-2018 BD65_1422 61927c23d0b2726cdd08c1661d85d004 632 Pfam PF07510 Protein of unknown function (DUF1524) 529 609 5.1E-8 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 BD65_1422 61927c23d0b2726cdd08c1661d85d004 632 Pfam PF03235 Protein of unknown function DUF262 12 218 6.9E-30 T 14-10-2018 IPR004919 Domain of unknown function DUF262 BD65_3169 d07e9493324ff3f3bb44a42ea0fc6bc6 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.453 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BD65_3169 d07e9493324ff3f3bb44a42ea0fc6bc6 258 Pfam PF00977 Histidine biosynthesis protein 5 239 1.7E-74 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BD65_3169 d07e9493324ff3f3bb44a42ea0fc6bc6 258 SUPERFAMILY SSF51366 1 257 6.04E-70 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BD65_3169 d07e9493324ff3f3bb44a42ea0fc6bc6 258 Gene3D G3DSA:3.20.20.70 1 258 2.3E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_3169 d07e9493324ff3f3bb44a42ea0fc6bc6 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.8E-111 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BD65_2399 fd39a4ff54cf23286813c417f7200305 1691 TIGRFAM TIGR03237 dnd_assoc_2: DNA phosphorothioation-dependent restriction protein DptH 4 1253 0.0 T 14-10-2018 IPR017646 DNA phosphorothioation-dependent restriction protein DptH BD65_2399 fd39a4ff54cf23286813c417f7200305 1691 Pfam PF01935 Domain of unknown function DUF87 1343 1550 4.6E-6 T 14-10-2018 IPR002789 Helicase HerA, central domain BD65_2399 fd39a4ff54cf23286813c417f7200305 1691 Gene3D G3DSA:3.40.50.300 1329 1420 8.0E-8 T 14-10-2018 BD65_2399 fd39a4ff54cf23286813c417f7200305 1691 Gene3D G3DSA:3.40.50.300 1491 1687 1.7E-20 T 14-10-2018 BD65_2399 fd39a4ff54cf23286813c417f7200305 1691 SUPERFAMILY SSF52540 1315 1652 8.69E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 Gene3D G3DSA:2.60.40.10 23 141 1.6E-44 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 Gene3D G3DSA:2.60.40.10 143 224 5.2E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 SUPERFAMILY SSF49584 144 220 1.44E-25 T 14-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 SUPERFAMILY SSF49354 18 141 2.88E-45 T 14-10-2018 IPR008962 PapD-like superfamily BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 219 6.6E-18 T 14-10-2018 IPR016148 Pili assembly chaperone, C-terminal BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 141 7.2E-44 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 PRINTS PR00969 Pili chaperone signature 71 92 1.4E-34 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 PRINTS PR00969 Pili chaperone signature 24 33 1.4E-34 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 PRINTS PR00969 Pili chaperone signature 158 173 1.4E-34 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 PRINTS PR00969 Pili chaperone signature 123 138 1.4E-34 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_1008 6fe667ca46d6587ef5d3565df502ee39 226 PRINTS PR00969 Pili chaperone signature 99 116 1.4E-34 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 BD65_465 54cbd3cfa2050a1e85d29ef4ba373272 273 Pfam PF03618 Kinase/pyrophosphorylase 5 263 1.7E-73 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 BD65_465 54cbd3cfa2050a1e85d29ef4ba373272 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 272 73.839 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein BD65_465 54cbd3cfa2050a1e85d29ef4ba373272 273 SUPERFAMILY SSF47454 173 230 6.28E-5 T 14-10-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily GO:0003677|GO:0006355 BD65_409 b8caccaadfc2e3a8b0d748edb3ec4837 262 Gene3D G3DSA:3.90.210.10 13 233 3.0E-57 T 14-10-2018 BD65_409 b8caccaadfc2e3a8b0d748edb3ec4837 262 SUPERFAMILY SSF56399 15 224 3.38E-50 T 14-10-2018 BD65_409 b8caccaadfc2e3a8b0d748edb3ec4837 262 Pfam PF02917 Pertussis toxin, subunit 1 15 218 1.8E-24 T 14-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 BD65_409 b8caccaadfc2e3a8b0d748edb3ec4837 262 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 88 109 1.8E-12 T 14-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 BD65_409 b8caccaadfc2e3a8b0d748edb3ec4837 262 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 165 189 1.8E-12 T 14-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 BD65_409 b8caccaadfc2e3a8b0d748edb3ec4837 262 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 13 36 1.8E-12 T 14-10-2018 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 BD65_2296 8cd9372ae1de30ebe8bc7354b2d7ed42 419 SUPERFAMILY SSF117892 127 258 5.89E-20 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily BD65_2296 8cd9372ae1de30ebe8bc7354b2d7ed42 419 SMART SM00244 94 254 7.3E-43 T 14-10-2018 IPR001107 Band 7 domain BD65_2296 8cd9372ae1de30ebe8bc7354b2d7ed42 419 TIGRFAM TIGR01933 hflK: HflK protein 96 355 2.4E-119 T 14-10-2018 IPR010201 HflK GO:0016021 BD65_2296 8cd9372ae1de30ebe8bc7354b2d7ed42 419 Pfam PF01145 SPFH domain / Band 7 family 98 270 3.3E-30 T 14-10-2018 IPR001107 Band 7 domain BD65_2296 8cd9372ae1de30ebe8bc7354b2d7ed42 419 PRINTS PR00721 Stomatin signature 183 200 1.8E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BD65_2296 8cd9372ae1de30ebe8bc7354b2d7ed42 419 PRINTS PR00721 Stomatin signature 101 123 1.8E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BD65_2296 8cd9372ae1de30ebe8bc7354b2d7ed42 419 PRINTS PR00721 Stomatin signature 148 169 1.8E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BD65_2296 8cd9372ae1de30ebe8bc7354b2d7ed42 419 Gene3D G3DSA:3.30.479.30 136 245 5.6E-18 T 14-10-2018 BD65_2296 8cd9372ae1de30ebe8bc7354b2d7ed42 419 Pfam PF12221 Bacterial membrane protein N terminal 1 58 4.8E-14 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal BD65_1608 27916ac2f539f36722e9c52c4fe3005f 140 Pfam PF04965 Gene 25-like lysozyme 30 118 8.6E-23 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD BD65_1608 27916ac2f539f36722e9c52c4fe3005f 140 SUPERFAMILY SSF160719 26 132 6.02E-28 T 14-10-2018 BD65_1608 27916ac2f539f36722e9c52c4fe3005f 140 Gene3D G3DSA:3.10.450.40 4 134 1.3E-41 T 14-10-2018 BD65_1190 94503c6f2bcd7cf7795fa9b6ff2155ce 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 BD65_1190 94503c6f2bcd7cf7795fa9b6ff2155ce 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 242 5.9E-102 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BD65_1190 94503c6f2bcd7cf7795fa9b6ff2155ce 252 Gene3D G3DSA:3.40.1180.10 4 244 7.7E-91 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BD65_1190 94503c6f2bcd7cf7795fa9b6ff2155ce 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 3.7E-78 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BD65_1190 94503c6f2bcd7cf7795fa9b6ff2155ce 252 SUPERFAMILY SSF64005 15 238 4.58E-87 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BD65_1190 94503c6f2bcd7cf7795fa9b6ff2155ce 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.614 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BD65_1464 80fcffacf99e8cfce7da257f9113efd9 176 PIRSF PIRSF011443 1 176 1.9E-62 T 14-10-2018 IPR026267 Inner membrane protein YgjV BD65_1464 80fcffacf99e8cfce7da257f9113efd9 176 Pfam PF10688 Bacterial inner membrane protein 5 161 3.1E-55 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV BD65_1609 e6c30ff54baf31297c4d8536a8641f74 538 Pfam PF05954 Phage late control gene D protein (GPD) 62 333 3.1E-7 T 14-10-2018 BD65_1609 e6c30ff54baf31297c4d8536a8641f74 538 Gene3D G3DSA:2.40.50.230 353 444 7.2E-12 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily BD65_1609 e6c30ff54baf31297c4d8536a8641f74 538 SUPERFAMILY SSF69279 17 177 8.08E-12 T 14-10-2018 BD65_1609 e6c30ff54baf31297c4d8536a8641f74 538 SUPERFAMILY SSF69255 359 439 3.14E-15 T 14-10-2018 BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 249 4.0E-106 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 Pfam PF07702 UTRA domain 105 242 1.4E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 SMART SM00866 105 242 1.9E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 SUPERFAMILY SSF64288 72 248 7.69E-42 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 7.6E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 Gene3D G3DSA:1.10.10.10 19 88 6.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 Gene3D G3DSA:3.40.1410.10 103 238 5.7E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 SUPERFAMILY SSF46785 17 88 5.4E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 SMART SM00345 25 84 1.8E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 4.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_129 4b20aa2012ebd0325cc524a332f357e3 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 4.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_2495 6f3b9dd6b09dcf8def98a801e5c432bc 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.381 T 14-10-2018 IPR005583 Peroxide stress protein YaaA BD65_2495 6f3b9dd6b09dcf8def98a801e5c432bc 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 6.4E-92 T 14-10-2018 IPR005583 Peroxide stress protein YaaA BD65_2837 0a69e929f207a4f0a8c3f9cce2a556d2 132 Gene3D G3DSA:1.10.150.280 60 131 2.2E-18 T 14-10-2018 BD65_2837 0a69e929f207a4f0a8c3f9cce2a556d2 132 Pfam PF12836 Helix-hairpin-helix motif 68 130 3.0E-19 T 14-10-2018 BD65_2837 0a69e929f207a4f0a8c3f9cce2a556d2 132 SUPERFAMILY SSF47781 59 130 6.89E-23 T 14-10-2018 IPR010994 RuvA domain 2-like BD65_2837 0a69e929f207a4f0a8c3f9cce2a556d2 132 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 68 131 1.3E-24 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BD65_3068 fccbcf0fd0393a992a00a28ab444b7b9 333 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 56.34 T 14-10-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 BD65_3068 fccbcf0fd0393a992a00a28ab444b7b9 333 Gene3D G3DSA:2.130.10.10 1 332 2.8E-121 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BD65_3068 fccbcf0fd0393a992a00a28ab444b7b9 333 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 3.2E-89 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller BD65_3068 fccbcf0fd0393a992a00a28ab444b7b9 333 SUPERFAMILY SSF50974 20 328 8.37E-53 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 BD65_91 513a2d4102e831ecdebbabf83788acbf 216 PRINTS PR01549 Autoinducer synthesis protein signature 141 162 4.9E-61 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 BD65_91 513a2d4102e831ecdebbabf83788acbf 216 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 4.9E-61 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 BD65_91 513a2d4102e831ecdebbabf83788acbf 216 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 4.9E-61 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 BD65_91 513a2d4102e831ecdebbabf83788acbf 216 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 4.9E-61 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 BD65_91 513a2d4102e831ecdebbabf83788acbf 216 PRINTS PR01549 Autoinducer synthesis protein signature 94 106 4.9E-61 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 BD65_91 513a2d4102e831ecdebbabf83788acbf 216 PRINTS PR01549 Autoinducer synthesis protein signature 163 180 4.9E-61 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 BD65_91 513a2d4102e831ecdebbabf83788acbf 216 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 4.9E-61 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 BD65_91 513a2d4102e831ecdebbabf83788acbf 216 SUPERFAMILY SSF55729 1 210 1.03E-44 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_91 513a2d4102e831ecdebbabf83788acbf 216 Pfam PF00765 Autoinducer synthase 11 185 2.2E-66 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 BD65_91 513a2d4102e831ecdebbabf83788acbf 216 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 14-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 BD65_91 513a2d4102e831ecdebbabf83788acbf 216 Gene3D G3DSA:3.40.630.30 1 211 7.2E-53 T 14-10-2018 BD65_1573 73f93f9490f15ab3fd50ea7fb677280d 117 Gene3D G3DSA:3.90.1150.30 1 117 4.7E-40 T 14-10-2018 IPR038056 YjbR-like superfamily BD65_1573 73f93f9490f15ab3fd50ea7fb677280d 117 SUPERFAMILY SSF142906 1 115 2.22E-35 T 14-10-2018 IPR038056 YjbR-like superfamily BD65_1573 73f93f9490f15ab3fd50ea7fb677280d 117 Pfam PF04237 YjbR 12 102 1.6E-19 T 14-10-2018 IPR007351 Uncharacterised protein YjbR BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 136 148 5.8E-32 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 96 108 5.8E-32 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 5.8E-32 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 226 236 5.8E-32 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 108 122 5.8E-32 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 36 45 5.8E-32 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 213 225 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 Pfam PF00813 FliP family 40 232 6.2E-78 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 165 180 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 77 96 5.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 186 207 5.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 57 77 5.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 210 235 5.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 38 57 5.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 185 5.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BD65_686 0ff223b0f04019dcd2862c213f0ede83 238 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 40 236 1.5E-93 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BD65_1935 d43dc55b976897e79baafb63546c9f10 205 Pfam PF03458 UPF0126 domain 91 164 8.9E-21 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 BD65_1935 d43dc55b976897e79baafb63546c9f10 205 Pfam PF03458 UPF0126 domain 5 78 6.1E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 BD65_2416 5bae46c538bd8cb07f13a9de36f90ae0 355 SUPERFAMILY SSF52949 1 148 7.4E-45 T 14-10-2018 BD65_2416 5bae46c538bd8cb07f13a9de36f90ae0 355 Pfam PF01661 Macro domain 18 129 2.3E-19 T 14-10-2018 IPR002589 Macro domain BD65_2416 5bae46c538bd8cb07f13a9de36f90ae0 355 Gene3D G3DSA:3.40.220.10 1 148 2.5E-41 T 14-10-2018 BD65_2416 5bae46c538bd8cb07f13a9de36f90ae0 355 SMART SM00506 1 132 5.9E-16 T 14-10-2018 IPR002589 Macro domain BD65_26 94143bac028849940ed54addd88b9511 109 Gene3D G3DSA:3.30.1420.10 1 37 1.8E-12 T 14-10-2018 BD65_26 94143bac028849940ed54addd88b9511 109 SUPERFAMILY SSF69721 2 109 3.92E-42 T 14-10-2018 IPR025526 DsrC-like domain superfamily BD65_26 94143bac028849940ed54addd88b9511 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 2.1E-51 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE BD65_26 94143bac028849940ed54addd88b9511 109 Gene3D G3DSA:1.10.10.370 39 109 1.4E-32 T 14-10-2018 BD65_26 94143bac028849940ed54addd88b9511 109 PIRSF PIRSF006223 2 109 1.3E-47 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE BD65_26 94143bac028849940ed54addd88b9511 109 Pfam PF04358 DsrC like protein 3 109 1.9E-46 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE BD65_1785 711f0d3a0b2edaecf4faaba14587338d 492 Gene3D G3DSA:3.40.50.720 1 208 8.5E-87 T 14-10-2018 BD65_1785 711f0d3a0b2edaecf4faaba14587338d 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 486 38.969 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BD65_1785 711f0d3a0b2edaecf4faaba14587338d 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 483 1.6E-22 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BD65_1785 711f0d3a0b2edaecf4faaba14587338d 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 1.7E-26 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BD65_1785 711f0d3a0b2edaecf4faaba14587338d 492 SUPERFAMILY SSF48179 210 343 1.7E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_1785 711f0d3a0b2edaecf4faaba14587338d 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 3.6E-133 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BD65_1785 711f0d3a0b2edaecf4faaba14587338d 492 SUPERFAMILY SSF51735 4 206 6.25E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1785 711f0d3a0b2edaecf4faaba14587338d 492 Gene3D G3DSA:1.10.1040.10 209 492 2.7E-126 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BD65_1785 711f0d3a0b2edaecf4faaba14587338d 492 SUPERFAMILY SSF48179 348 485 2.89E-41 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_1785 711f0d3a0b2edaecf4faaba14587338d 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.9E-58 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BD65_151 eac56f32011c9d3588be9cb81e312fe4 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 9.1E-119 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BD65_151 eac56f32011c9d3588be9cb81e312fe4 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.241 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BD65_151 eac56f32011c9d3588be9cb81e312fe4 284 Gene3D G3DSA:3.20.20.70 1 284 3.1E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_151 eac56f32011c9d3588be9cb81e312fe4 284 Pfam PF00793 DAHP synthetase I family 10 275 1.5E-68 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BD65_151 eac56f32011c9d3588be9cb81e312fe4 284 SUPERFAMILY SSF51569 3 279 1.01E-102 T 14-10-2018 BD65_2779 dc1d6b02fa6f2eb92059dcf65176f2ff 708 Gene3D G3DSA:2.170.130.10 43 173 1.9E-33 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BD65_2779 dc1d6b02fa6f2eb92059dcf65176f2ff 708 Gene3D G3DSA:2.40.170.20 175 708 5.7E-123 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BD65_2779 dc1d6b02fa6f2eb92059dcf65176f2ff 708 Pfam PF00593 TonB dependent receptor 236 706 4.7E-61 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BD65_2779 dc1d6b02fa6f2eb92059dcf65176f2ff 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 163 1.3E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BD65_2779 dc1d6b02fa6f2eb92059dcf65176f2ff 708 SUPERFAMILY SSF56935 52 708 6.25E-126 T 14-10-2018 BD65_2779 dc1d6b02fa6f2eb92059dcf65176f2ff 708 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 708 4.9E-101 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BD65_1343 9ccd69a54a82cbb94fae932bed8b24e3 422 SUPERFAMILY SSF103473 15 406 2.49E-42 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_1343 9ccd69a54a82cbb94fae932bed8b24e3 422 Pfam PF07690 Major Facilitator Superfamily 22 365 1.9E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_1343 9ccd69a54a82cbb94fae932bed8b24e3 422 Gene3D G3DSA:1.20.1250.20 14 402 1.1E-37 T 14-10-2018 BD65_3038 356c427a086075fbaef33d123af03637 45 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.8E-15 T 14-10-2018 IPR012994 Membrane bound YbgT-like BD65_3038 356c427a086075fbaef33d123af03637 45 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 8.3E-20 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 1.0E-68 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 1.0E-68 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 1.0E-68 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 1.0E-68 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 1.0E-68 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 1.0E-68 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 SUPERFAMILY SSF53328 88 281 9.42E-61 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 Pfam PF00551 Formyl transferase 88 264 1.8E-53 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 45.865 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 PIRSF PIRSF036480 6 282 3.2E-115 T 14-10-2018 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 282 2.9E-129 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 Gene3D G3DSA:3.30.70.260 3 84 2.0E-15 T 14-10-2018 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 SUPERFAMILY SSF55021 8 58 2.21E-8 T 14-10-2018 BD65_243 663f702f63c6a735fe9280aac658f2c3 282 Pfam PF01842 ACT domain 10 70 5.3E-7 T 14-10-2018 IPR002912 ACT domain BD65_243 663f702f63c6a735fe9280aac658f2c3 282 Gene3D G3DSA:3.40.50.170 86 282 8.6E-67 T 14-10-2018 BD65_1363 cacf07463fc4ad69c3093e920477a190 244 Gene3D G3DSA:1.25.40.10 21 220 1.0E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1363 cacf07463fc4ad69c3093e920477a190 244 SUPERFAMILY SSF48452 47 218 4.96E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2376 aed4c4a572772afd0ed370b8db517c75 192 Pfam PF13238 AAA domain 5 138 1.7E-7 T 14-10-2018 BD65_2376 aed4c4a572772afd0ed370b8db517c75 192 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 178 32.736 T 14-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_2376 aed4c4a572772afd0ed370b8db517c75 192 Gene3D G3DSA:3.40.50.300 7 153 4.0E-15 T 14-10-2018 BD65_2376 aed4c4a572772afd0ed370b8db517c75 192 Gene3D G3DSA:3.30.63.10 34 89 4.0E-15 T 14-10-2018 BD65_2376 aed4c4a572772afd0ed370b8db517c75 192 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 179 1.6E-63 T 14-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_2376 aed4c4a572772afd0ed370b8db517c75 192 SUPERFAMILY SSF52540 1 181 5.59E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2376 aed4c4a572772afd0ed370b8db517c75 192 SMART SM00072 1 181 5.1E-11 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BD65_2198 550f5d29239c6d16c61fee65b8024b51 129 Pfam PF02635 DsrE/DsrF-like family 4 129 5.1E-29 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein BD65_2198 550f5d29239c6d16c61fee65b8024b51 129 Gene3D G3DSA:3.40.1260.10 1 129 4.5E-57 T 14-10-2018 IPR027396 DsrEFH-like BD65_2198 550f5d29239c6d16c61fee65b8024b51 129 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 2 129 39.834 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 BD65_2198 550f5d29239c6d16c61fee65b8024b51 129 SUPERFAMILY SSF75169 1 129 1.67E-37 T 14-10-2018 IPR027396 DsrEFH-like BD65_2198 550f5d29239c6d16c61fee65b8024b51 129 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 129 4.1E-54 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 Pfam PF00005 ABC transporter 336 469 9.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 Gene3D G3DSA:3.40.50.300 282 550 4.4E-63 T 14-10-2018 BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 Gene3D G3DSA:1.10.287.380 553 636 8.6E-30 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 SMART SM00382 344 515 3.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 SMART SM00382 28 230 4.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 Pfam PF16326 ABC transporter C-terminal domain 563 631 1.0E-20 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 SUPERFAMILY SSF52540 310 501 1.17E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 Gene3D G3DSA:3.40.50.300 11 279 1.8E-66 T 14-10-2018 BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 Pfam PF12848 ABC transporter 224 296 2.4E-9 T 14-10-2018 IPR032781 ABC-transporter extension domain BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 Pfam PF00005 ABC transporter 19 185 4.7E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_6 caf57a1a909e8037bb298fc3522c6a09 636 SUPERFAMILY SSF52540 4 244 1.03E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_963 df80df124cfc2ef4357ccd1f6afdadc5 141 PIRSF PIRSF037663 1 141 5.6E-11 T 14-10-2018 IPR017255 Acetyltransferase, GNAT, predicted BD65_963 df80df124cfc2ef4357ccd1f6afdadc5 141 Pfam PF00583 Acetyltransferase (GNAT) family 18 123 5.2E-19 T 14-10-2018 IPR000182 GNAT domain BD65_963 df80df124cfc2ef4357ccd1f6afdadc5 141 Gene3D G3DSA:3.40.630.30 1 141 9.7E-45 T 14-10-2018 BD65_963 df80df124cfc2ef4357ccd1f6afdadc5 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 52.285 T 14-10-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 BD65_963 df80df124cfc2ef4357ccd1f6afdadc5 141 SUPERFAMILY SSF55729 1 130 1.03E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_484 36e4332d0c864b579ca7f6cb1274afd2 163 Pfam PF00589 Phage integrase family 103 147 2.0E-10 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_484 36e4332d0c864b579ca7f6cb1274afd2 163 Gene3D G3DSA:1.10.443.10 33 162 1.0E-24 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BD65_484 36e4332d0c864b579ca7f6cb1274afd2 163 SUPERFAMILY SSF56349 57 156 1.0E-20 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_2396 4d72e5a7c162162d585d63472117dca2 425 Pfam PF13356 Arm DNA-binding domain 3 87 3.5E-21 T 14-10-2018 IPR025166 Integrase, DNA-binding domain BD65_2396 4d72e5a7c162162d585d63472117dca2 425 Gene3D G3DSA:1.10.443.10 205 390 4.1E-14 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BD65_2396 4d72e5a7c162162d585d63472117dca2 425 SUPERFAMILY SSF56349 97 383 4.41E-48 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_2396 4d72e5a7c162162d585d63472117dca2 425 Gene3D G3DSA:3.30.160.390 1 87 4.0E-35 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily BD65_2396 4d72e5a7c162162d585d63472117dca2 425 Pfam PF00589 Phage integrase family 207 383 3.3E-18 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_2396 4d72e5a7c162162d585d63472117dca2 425 Gene3D G3DSA:1.10.150.130 88 203 1.6E-26 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BD65_2801 edc5cf31aada3de79d09a9dc738b8bdc 110 SMART SM01323 19 102 1.8E-36 T 14-10-2018 IPR003849 Preprotein translocase YajC BD65_2801 edc5cf31aada3de79d09a9dc738b8bdc 110 Pfam PF02699 Preprotein translocase subunit 24 99 4.0E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC BD65_2801 edc5cf31aada3de79d09a9dc738b8bdc 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 1.3E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC BD65_2801 edc5cf31aada3de79d09a9dc738b8bdc 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 1.3E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC BD65_2801 edc5cf31aada3de79d09a9dc738b8bdc 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 102 2.8E-33 T 14-10-2018 IPR003849 Preprotein translocase YajC BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 Gene3D G3DSA:3.90.226.10 4 319 1.9E-123 T 14-10-2018 BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.823 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 SUPERFAMILY SSF52096 5 318 4.4E-105 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 2.2E-63 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_1179 fc9248318de91f205ee8f8c3b7e52867 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.2E-171 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BD65_1371 79e2d411cba1c31cbc021eb0eb1b873a 299 Pfam PF12833 Helix-turn-helix domain 214 289 5.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_1371 79e2d411cba1c31cbc021eb0eb1b873a 299 SUPERFAMILY SSF46689 244 291 1.61E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1371 79e2d411cba1c31cbc021eb0eb1b873a 299 SUPERFAMILY SSF46689 191 242 3.94E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1371 79e2d411cba1c31cbc021eb0eb1b873a 299 Gene3D G3DSA:1.10.10.60 187 295 1.0E-27 T 14-10-2018 BD65_1371 79e2d411cba1c31cbc021eb0eb1b873a 299 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 179 5.6E-41 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal BD65_1371 79e2d411cba1c31cbc021eb0eb1b873a 299 SMART SM00342 208 291 2.9E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_1210 8376e9155da41016f1a4ba127670ac6f 401 Gene3D G3DSA:3.40.640.10 34 292 2.7E-146 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_1210 8376e9155da41016f1a4ba127670ac6f 401 Pfam PF00266 Aminotransferase class-V 21 388 1.4E-135 T 14-10-2018 IPR000192 Aminotransferase class V domain BD65_1210 8376e9155da41016f1a4ba127670ac6f 401 Gene3D G3DSA:3.90.1150.10 21 389 2.7E-146 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_1210 8376e9155da41016f1a4ba127670ac6f 401 SUPERFAMILY SSF53383 5 393 1.99E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_1210 8376e9155da41016f1a4ba127670ac6f 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BD65_1210 8376e9155da41016f1a4ba127670ac6f 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 400 1.2E-219 T 14-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BD65_2518 f858323d7fc0834e147d593f43bc953c 160 SUPERFAMILY SSF53597 1 160 3.8E-56 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BD65_2518 f858323d7fc0834e147d593f43bc953c 160 Gene3D G3DSA:3.40.430.10 1 160 1.0E-57 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BD65_2518 f858323d7fc0834e147d593f43bc953c 160 PIRSF PIRSF000194 1 160 1.3E-58 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 BD65_2518 f858323d7fc0834e147d593f43bc953c 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 3.7E-14 T 14-10-2018 BD65_2518 f858323d7fc0834e147d593f43bc953c 160 PRINTS PR00070 Dihydrofolate reductase signature 91 105 3.7E-14 T 14-10-2018 BD65_2518 f858323d7fc0834e147d593f43bc953c 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 3.7E-14 T 14-10-2018 BD65_2518 f858323d7fc0834e147d593f43bc953c 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 3.7E-14 T 14-10-2018 BD65_2518 f858323d7fc0834e147d593f43bc953c 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 BD65_2518 f858323d7fc0834e147d593f43bc953c 160 Pfam PF00186 Dihydrofolate reductase 3 159 5.0E-58 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BD65_2112 ba058ac3808b9c9360b95d1f947aeb3e 438 PIRSF PIRSF002746 1 438 8.4E-161 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BD65_2112 ba058ac3808b9c9360b95d1f947aeb3e 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 4.4E-197 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BD65_2112 ba058ac3808b9c9360b95d1f947aeb3e 438 Pfam PF02447 GntP family permease 1 437 3.5E-183 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BD65_662 779056a4fcbf723f5f90f637aa848067 329 Gene3D G3DSA:3.40.50.1100 18 323 5.8E-125 T 14-10-2018 BD65_662 779056a4fcbf723f5f90f637aa848067 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 317 3.0E-57 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BD65_662 779056a4fcbf723f5f90f637aa848067 329 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 2 329 64.069 T 14-10-2018 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 BD65_662 779056a4fcbf723f5f90f637aa848067 329 PIRSF PIRSF006278 1 329 3.2E-98 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase BD65_662 779056a4fcbf723f5f90f637aa848067 329 Gene3D G3DSA:3.40.50.1100 51 159 5.8E-125 T 14-10-2018 BD65_662 779056a4fcbf723f5f90f637aa848067 329 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 13 327 8.3E-128 T 14-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 BD65_662 779056a4fcbf723f5f90f637aa848067 329 SUPERFAMILY SSF53686 8 326 3.01E-88 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BD65_312 0d46ef6b241b8be9210706531e8f0b50 238 PIRSF PIRSF006102 1 219 7.6E-77 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BD65_312 0d46ef6b241b8be9210706531e8f0b50 238 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 1.5E-63 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BD65_312 0d46ef6b241b8be9210706531e8f0b50 238 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 1.0E-84 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 BD65_312 0d46ef6b241b8be9210706531e8f0b50 238 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.288 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 BD65_3106 20f6dc1fd5f90bd4b5e9cac819d426c2 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 1.8E-26 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 BD65_3106 20f6dc1fd5f90bd4b5e9cac819d426c2 156 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 2.4E-27 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 BD65_3093 ebd8596179db5c6e1c67f9e5bff62954 395 Pfam PF00270 DEAD/DEAH box helicase 1 139 5.4E-36 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_3093 ebd8596179db5c6e1c67f9e5bff62954 395 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 98 106 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BD65_3093 ebd8596179db5c6e1c67f9e5bff62954 395 Gene3D G3DSA:3.40.50.300 1 154 3.2E-51 T 14-10-2018 BD65_3093 ebd8596179db5c6e1c67f9e5bff62954 395 SMART SM00487 3 167 1.2E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_3093 ebd8596179db5c6e1c67f9e5bff62954 395 SMART SM00490 203 284 2.3E-32 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_3093 ebd8596179db5c6e1c67f9e5bff62954 395 SUPERFAMILY SSF52540 19 305 1.07E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3093 ebd8596179db5c6e1c67f9e5bff62954 395 Gene3D G3DSA:3.40.50.300 159 338 5.6E-51 T 14-10-2018 BD65_3093 ebd8596179db5c6e1c67f9e5bff62954 395 Pfam PF00271 Helicase conserved C-terminal domain 178 283 9.1E-27 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_275 25410f25951e5feb7a4fadc696630ed4 182 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 3.6E-70 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 BD65_275 25410f25951e5feb7a4fadc696630ed4 182 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.445 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 BD65_275 25410f25951e5feb7a4fadc696630ed4 182 Pfam PF04279 Intracellular septation protein A 1 174 1.6E-71 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 BD65_3201 889e1b828b8bdd69ebdd164c775ebc17 149 Pfam PF10767 Protein of unknown function (DUF2593) 7 147 6.3E-57 T 14-10-2018 IPR019703 Protein of unknown function DUF2593 BD65_1578 7371856af7eb939aebf388fa3424005f 329 SMART SM00829 11 325 1.7E-25 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BD65_1578 7371856af7eb939aebf388fa3424005f 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.3E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BD65_1578 7371856af7eb939aebf388fa3424005f 329 Pfam PF00107 Zinc-binding dehydrogenase 152 258 1.6E-29 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BD65_1578 7371856af7eb939aebf388fa3424005f 329 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 BD65_1578 7371856af7eb939aebf388fa3424005f 329 SUPERFAMILY SSF51735 112 276 5.82E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1578 7371856af7eb939aebf388fa3424005f 329 SUPERFAMILY SSF50129 8 142 4.11E-34 T 14-10-2018 IPR011032 GroES-like superfamily BD65_1578 7371856af7eb939aebf388fa3424005f 329 Gene3D G3DSA:3.40.50.720 124 269 4.3E-119 T 14-10-2018 BD65_1578 7371856af7eb939aebf388fa3424005f 329 Gene3D G3DSA:3.90.180.10 11 321 4.3E-119 T 14-10-2018 BD65_1940 4cc53a93448484b739b5e02cc6dd1673 230 SUPERFAMILY SSF75217 4 184 1.24E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BD65_1940 4cc53a93448484b739b5e02cc6dd1673 230 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 35.837 T 14-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 BD65_1940 4cc53a93448484b739b5e02cc6dd1673 230 Gene3D G3DSA:3.40.1280.10 2 190 7.4E-61 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BD65_1940 4cc53a93448484b739b5e02cc6dd1673 230 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 2.4E-23 T 14-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 BD65_1940 4cc53a93448484b739b5e02cc6dd1673 230 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.7E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BD65_2945 306ad6cfa817f94afe022ebc89873b03 511 Gene3D G3DSA:1.50.10.140 33 168 1.6E-7 T 14-10-2018 BD65_2945 306ad6cfa817f94afe022ebc89873b03 511 Pfam PF11329 Protein of unknown function (DUF3131) 41 418 1.8E-141 T 14-10-2018 IPR021478 Protein of unknown function DUF3131 BD65_211 848f6047576d9bde1e0e5ac96afe03ee 524 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 4.1E-282 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 BD65_211 848f6047576d9bde1e0e5ac96afe03ee 524 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 524 362.794 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 BD65_211 848f6047576d9bde1e0e5ac96afe03ee 524 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 511 1.4E-279 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 BD65_48 4f34dcc3e35f4d299f197af70e13c1c0 507 Gene3D G3DSA:3.60.10.10 264 499 2.3E-13 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BD65_48 4f34dcc3e35f4d299f197af70e13c1c0 507 SUPERFAMILY SSF56219 275 494 1.8E-13 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 SMART SM00421 146 203 3.8E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 SMART SM00448 5 118 6.5E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 Pfam PF00072 Response regulator receiver domain 7 117 2.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 Gene3D G3DSA:3.40.50.12740 6 207 6.0E-65 T 14-10-2018 BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 SUPERFAMILY SSF52172 6 136 2.13E-33 T 14-10-2018 IPR011006 CheY-like superfamily BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 3.8E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.2E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.2E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.2E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BD65_973 9b537d7e8be0a1d019a984cb9a175909 209 SUPERFAMILY SSF46894 130 207 5.78E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_1937 94cfe86c68e0c22ed7e9560da2ca150f 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 BD65_1937 94cfe86c68e0c22ed7e9560da2ca150f 207 Gene3D G3DSA:3.30.63.10 37 96 6.0E-75 T 14-10-2018 BD65_1937 94cfe86c68e0c22ed7e9560da2ca150f 207 SMART SM00072 3 187 8.7E-81 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BD65_1937 94cfe86c68e0c22ed7e9560da2ca150f 207 Pfam PF00625 Guanylate kinase 5 186 5.9E-67 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BD65_1937 94cfe86c68e0c22ed7e9560da2ca150f 207 SUPERFAMILY SSF52540 3 189 3.14E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1937 94cfe86c68e0c22ed7e9560da2ca150f 207 Gene3D G3DSA:3.40.50.300 8 183 6.0E-75 T 14-10-2018 BD65_1937 94cfe86c68e0c22ed7e9560da2ca150f 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.464 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BD65_1937 94cfe86c68e0c22ed7e9560da2ca150f 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 2.6E-75 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BD65_479 7b30bb91011b98d109f6a29bd6a7b9d9 667 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.235 T 14-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 BD65_479 7b30bb91011b98d109f6a29bd6a7b9d9 667 Pfam PF02911 Formyl transferase, C-terminal domain 203 292 7.6E-19 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_479 7b30bb91011b98d109f6a29bd6a7b9d9 667 SUPERFAMILY SSF51735 317 651 1.38E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_479 7b30bb91011b98d109f6a29bd6a7b9d9 667 PIRSF PIRSF036506 1 660 0.0 T 14-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 BD65_479 7b30bb91011b98d109f6a29bd6a7b9d9 667 SUPERFAMILY SSF53328 1 202 4.58E-54 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_479 7b30bb91011b98d109f6a29bd6a7b9d9 667 Gene3D G3DSA:3.40.50.12230 1 304 3.1E-103 T 14-10-2018 BD65_479 7b30bb91011b98d109f6a29bd6a7b9d9 667 SUPERFAMILY SSF50486 205 304 2.2E-25 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 BD65_479 7b30bb91011b98d109f6a29bd6a7b9d9 667 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 2.6E-43 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BD65_479 7b30bb91011b98d109f6a29bd6a7b9d9 667 Pfam PF00551 Formyl transferase 26 173 5.6E-24 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BD65_479 7b30bb91011b98d109f6a29bd6a7b9d9 667 Gene3D G3DSA:3.40.50.720 314 659 7.7E-126 T 14-10-2018 BD65_1309 fa6edcad3306ee8afa0371ebab2532fd 361 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 60.346 T 14-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 BD65_1309 fa6edcad3306ee8afa0371ebab2532fd 361 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 1.5E-122 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 BD65_1309 fa6edcad3306ee8afa0371ebab2532fd 361 SUPERFAMILY SSF55909 3 360 8.74E-141 T 14-10-2018 BD65_1309 fa6edcad3306ee8afa0371ebab2532fd 361 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 5 360 9.2E-177 T 14-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 BD65_1309 fa6edcad3306ee8afa0371ebab2532fd 361 Gene3D G3DSA:3.75.10.10 2 361 5.3E-140 T 14-10-2018 BD65_3081 99ff9e6438f25665816a280c1c395129 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 292 2.7E-72 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 BD65_3081 99ff9e6438f25665816a280c1c395129 302 SUPERFAMILY SSF142338 11 294 4.05E-79 T 14-10-2018 BD65_3081 99ff9e6438f25665816a280c1c395129 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 269 1.6E-93 T 14-10-2018 IPR010119 Gluconeogenesis factor BD65_3081 99ff9e6438f25665816a280c1c395129 302 Gene3D G3DSA:3.40.50.12300 9 300 8.4E-75 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily BD65_3081 99ff9e6438f25665816a280c1c395129 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 30.864 T 14-10-2018 IPR010119 Gluconeogenesis factor BD65_3025 08ef54d0b52755bed13be70f01b84123 214 Pfam PF01470 Pyroglutamyl peptidase 3 201 3.1E-82 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 Gene3D G3DSA:3.40.630.20 1 214 5.2E-83 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 SUPERFAMILY SSF53182 1 214 1.18E-74 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 PIRSF PIRSF015592 1 212 1.5E-88 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 200 41.755 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.5E-48 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 161 173 2.5E-48 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.5E-48 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.5E-48 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 2.5E-48 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BD65_3025 08ef54d0b52755bed13be70f01b84123 214 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 213 4.1E-91 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 BD65_929 48183dcd0924236ed518c70eab56e201 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 1.7E-30 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BD65_929 48183dcd0924236ed518c70eab56e201 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 1.7E-30 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BD65_929 48183dcd0924236ed518c70eab56e201 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 1.7E-30 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BD65_929 48183dcd0924236ed518c70eab56e201 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 1.7E-30 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BD65_929 48183dcd0924236ed518c70eab56e201 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 1.7E-30 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BD65_929 48183dcd0924236ed518c70eab56e201 409 Pfam PF01566 Natural resistance-associated macrophage protein 38 383 2.8E-121 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BD65_929 48183dcd0924236ed518c70eab56e201 409 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 36.673 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BD65_929 48183dcd0924236ed518c70eab56e201 409 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 20 377 3.4E-96 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BD65_670 bce7c5e906ef8aa55178b5a7c394a1de 121 Gene3D G3DSA:1.20.58.380 2 110 1.1E-34 T 14-10-2018 BD65_670 bce7c5e906ef8aa55178b5a7c394a1de 121 Pfam PF05400 Flagellar protein FliT 21 106 2.3E-21 T 14-10-2018 IPR008622 Flagellar protein FliT BD65_670 bce7c5e906ef8aa55178b5a7c394a1de 121 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 120 25.843 T 14-10-2018 IPR008622 Flagellar protein FliT BD65_707 e2a664e9b35e5c9c2fc258305cb25ddf 515 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 438 448 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BD65_707 e2a664e9b35e5c9c2fc258305cb25ddf 515 Gene3D G3DSA:3.40.50.200 149 511 3.5E-79 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BD65_707 e2a664e9b35e5c9c2fc258305cb25ddf 515 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 194 205 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BD65_707 e2a664e9b35e5c9c2fc258305cb25ddf 515 PRINTS PR00723 Subtilisin serine protease family (S8) signature 437 453 1.4E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related BD65_707 e2a664e9b35e5c9c2fc258305cb25ddf 515 PRINTS PR00723 Subtilisin serine protease family (S8) signature 233 246 1.4E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related BD65_707 e2a664e9b35e5c9c2fc258305cb25ddf 515 PRINTS PR00723 Subtilisin serine protease family (S8) signature 189 208 1.4E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related BD65_707 e2a664e9b35e5c9c2fc258305cb25ddf 515 SUPERFAMILY SSF52743 179 510 4.97E-65 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BD65_707 e2a664e9b35e5c9c2fc258305cb25ddf 515 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 237 247 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BD65_707 e2a664e9b35e5c9c2fc258305cb25ddf 515 Pfam PF00082 Subtilase family 189 495 9.1E-37 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BD65_3103 7ded27de21e0203f202f3ff972bd6cb9 310 SUPERFAMILY SSF53850 45 300 9.23E-45 T 14-10-2018 BD65_3103 7ded27de21e0203f202f3ff972bd6cb9 310 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 306 5.5E-98 T 14-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 BD65_3103 7ded27de21e0203f202f3ff972bd6cb9 310 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 269 1.4E-82 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 BD65_3103 7ded27de21e0203f202f3ff972bd6cb9 310 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 45 291 1.8E-47 T 14-10-2018 BD65_3103 7ded27de21e0203f202f3ff972bd6cb9 310 Gene3D G3DSA:3.40.190.10 118 244 3.0E-55 T 14-10-2018 BD65_3103 7ded27de21e0203f202f3ff972bd6cb9 310 Gene3D G3DSA:3.40.190.10 32 272 3.0E-55 T 14-10-2018 BD65_2764 037b295d70dec81d7379c06cf1c29e70 324 SUPERFAMILY SSF143631 10 320 3.14E-101 T 14-10-2018 IPR003374 ApbE-like superfamily BD65_2764 037b295d70dec81d7379c06cf1c29e70 324 Pfam PF02424 ApbE family 17 293 5.2E-86 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 BD65_2764 037b295d70dec81d7379c06cf1c29e70 324 Gene3D G3DSA:3.10.520.20 6 323 3.7E-114 T 14-10-2018 BD65_2764 037b295d70dec81d7379c06cf1c29e70 324 PIRSF PIRSF006268 6 321 9.2E-91 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 BD65_2885 f82957efbcdd438656c32bf2981fc5ac 383 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 11 369 2.0E-74 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 BD65_2885 f82957efbcdd438656c32bf2981fc5ac 383 SUPERFAMILY SSF53756 11 381 2.77E-110 T 14-10-2018 BD65_2885 f82957efbcdd438656c32bf2981fc5ac 383 Gene3D G3DSA:3.40.50.2000 13 194 1.2E-107 T 14-10-2018 BD65_2885 f82957efbcdd438656c32bf2981fc5ac 383 Gene3D G3DSA:3.40.50.2000 195 335 1.2E-107 T 14-10-2018 BD65_2885 f82957efbcdd438656c32bf2981fc5ac 383 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 37 369 2.3E-93 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_655 1e7941848cd664b9f997ba3ebc41efc5 447 Pfam PF13520 Amino acid permease 7 418 2.9E-38 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_655 1e7941848cd664b9f997ba3ebc41efc5 447 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 2 432 3.6E-135 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 BD65_655 1e7941848cd664b9f997ba3ebc41efc5 447 Gene3D G3DSA:1.20.1740.10 2 445 9.1E-59 T 14-10-2018 BD65_655 1e7941848cd664b9f997ba3ebc41efc5 447 PIRSF PIRSF006060 1 433 5.7E-49 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_444 8efd79343ffdfedc28c296469c7c1453 401 Gene3D G3DSA:1.20.1720.10 1 374 7.2E-80 T 14-10-2018 BD65_444 8efd79343ffdfedc28c296469c7c1453 401 Pfam PF07690 Major Facilitator Superfamily 7 336 5.7E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_444 8efd79343ffdfedc28c296469c7c1453 401 SUPERFAMILY SSF103473 2 383 5.49E-58 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_444 8efd79343ffdfedc28c296469c7c1453 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 2 374 1.1E-104 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BD65_3211 85aba95dfea1bf049c6e47aca6a47101 480 SUPERFAMILY SSF51735 1 295 6.71E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_3211 85aba95dfea1bf049c6e47aca6a47101 480 Gene3D G3DSA:3.40.50.720 5 300 7.8E-34 T 14-10-2018 BD65_3211 85aba95dfea1bf049c6e47aca6a47101 480 Pfam PF11066 Protein of unknown function (DUF2867) 335 463 1.0E-11 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 BD65_3211 85aba95dfea1bf049c6e47aca6a47101 480 Pfam PF13460 NAD(P)H-binding 10 148 9.0E-15 T 14-10-2018 IPR016040 NAD(P)-binding domain BD65_97 943fe361552ba6fedc6ab48f07615045 453 Pfam PF03390 2-hydroxycarboxylate transporter family 39 446 4.8E-148 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 BD65_97 943fe361552ba6fedc6ab48f07615045 453 PIRSF PIRSF005348 15 453 1.3E-159 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 BD65_1867 2d0ac3de573f6083a10e7b104d47e374 302 Pfam PF04865 Baseplate J-like protein 118 261 1.5E-26 T 14-10-2018 IPR006949 Baseplate protein J-like BD65_1867 2d0ac3de573f6083a10e7b104d47e374 302 PIRSF PIRSF020481 1 302 3.1E-126 T 14-10-2018 IPR014507 Baseplate assembly protein J, predicted BD65_2705 70a7cac1f365292cf5bd2de59a3f9a4d 502 Pfam PF09362 Domain of unknown function (DUF1996) 66 292 2.3E-36 T 14-10-2018 IPR018535 Domain of unknown function DUF1996 BD65_738 f4f2b136b4054ad5f12e305fc794f6c6 182 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 14 176 2.4E-52 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 BD65_738 f4f2b136b4054ad5f12e305fc794f6c6 182 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 15 176 9.2E-53 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 BD65_1299 2ab57a09c7180cfe2dfaf24add716117 143 Pfam PF04143 Sulphur transport 10 131 1.1E-8 T 14-10-2018 IPR007272 Sulphur transport domain BD65_1592 4e28eb371385830c33b3b8d820362ddb 525 Gene3D G3DSA:3.10.650.10 106 279 2.9E-56 T 14-10-2018 BD65_1592 4e28eb371385830c33b3b8d820362ddb 525 Gene3D G3DSA:2.40.430.10 126 215 2.9E-56 T 14-10-2018 BD65_1592 4e28eb371385830c33b3b8d820362ddb 525 SUPERFAMILY SSF161098 272 514 9.16E-57 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1592 4e28eb371385830c33b3b8d820362ddb 525 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 108 271 9.7E-63 T 14-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain BD65_1592 4e28eb371385830c33b3b8d820362ddb 525 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 309 512 6.1E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1592 4e28eb371385830c33b3b8d820362ddb 525 Gene3D G3DSA:1.20.58.370 10 103 8.4E-38 T 14-10-2018 IPR035277 MalF, N-terminal BD65_1592 4e28eb371385830c33b3b8d820362ddb 525 SUPERFAMILY SSF160964 23 271 1.7E-84 T 14-10-2018 BD65_1592 4e28eb371385830c33b3b8d820362ddb 525 Gene3D G3DSA:1.10.3720.10 281 525 2.1E-69 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3215 60689dac00c9cc620206c97ac130aefb 298 Pfam PF03956 Lysine exporter LysO 113 297 3.5E-56 T 14-10-2018 IPR005642 Lysine exporter LysO BD65_3215 60689dac00c9cc620206c97ac130aefb 298 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 152 284 2.0E-52 T 14-10-2018 IPR005642 Lysine exporter LysO BD65_1531 6be912245e0429a7a95b3a27850c56f6 128 SUPERFAMILY SSF47175 23 128 6.47E-29 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 BD65_1531 6be912245e0429a7a95b3a27850c56f6 128 PIRSF PIRSF000029 1 128 5.5E-47 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 BD65_1531 6be912245e0429a7a95b3a27850c56f6 128 Pfam PF07361 Cytochrome b562 24 128 2.6E-28 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 BD65_1531 6be912245e0429a7a95b3a27850c56f6 128 Gene3D G3DSA:1.20.120.10 18 128 4.5E-40 T 14-10-2018 BD65_2734 4e28296ef9d8ff0a3a5d2650a9fac194 114 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.8E-22 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BD65_2734 4e28296ef9d8ff0a3a5d2650a9fac194 114 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 3.7E-33 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BD65_2734 4e28296ef9d8ff0a3a5d2650a9fac194 114 Gene3D G3DSA:3.30.160.100 1 106 2.0E-36 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like BD65_2734 4e28296ef9d8ff0a3a5d2650a9fac194 114 SUPERFAMILY SSF69754 3 106 4.05E-32 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like BD65_896 d744cc5135510a8aad99425251dab3e0 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BD65_896 d744cc5135510a8aad99425251dab3e0 361 PIRSF PIRSF001456 3 358 4.2E-142 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BD65_896 d744cc5135510a8aad99425251dab3e0 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 37.892 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BD65_896 d744cc5135510a8aad99425251dab3e0 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BD65_896 d744cc5135510a8aad99425251dab3e0 361 Pfam PF01264 Chorismate synthase 10 345 9.8E-144 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BD65_896 d744cc5135510a8aad99425251dab3e0 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BD65_896 d744cc5135510a8aad99425251dab3e0 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.5E-140 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BD65_896 d744cc5135510a8aad99425251dab3e0 361 Gene3D G3DSA:3.60.150.10 1 360 3.7E-159 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BD65_896 d744cc5135510a8aad99425251dab3e0 361 SUPERFAMILY SSF103263 4 351 4.45E-149 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BD65_603 bc802d5ad2f3c5fa9ab512b17aaa479d 243 SUPERFAMILY SSF53335 27 235 2.92E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_603 bc802d5ad2f3c5fa9ab512b17aaa479d 243 Pfam PF08241 Methyltransferase domain 47 141 2.2E-22 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BD65_603 bc802d5ad2f3c5fa9ab512b17aaa479d 243 Gene3D G3DSA:3.40.50.150 24 242 2.2E-66 T 14-10-2018 BD65_2626 a7c691a301925ca495e87ac2c09cb4a1 135 Gene3D G3DSA:3.30.160.250 1 86 6.1E-21 T 14-10-2018 BD65_2626 a7c691a301925ca495e87ac2c09cb4a1 135 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 129 3.5E-29 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system BD65_2626 a7c691a301925ca495e87ac2c09cb4a1 135 SUPERFAMILY SSF143100 1 60 3.53E-15 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like BD65_1250 7a3404ce121bc396e26bc21299736f32 395 Gene3D G3DSA:1.20.81.30 249 356 5.7E-22 T 14-10-2018 BD65_1250 7a3404ce121bc396e26bc21299736f32 395 Gene3D G3DSA:1.20.81.30 47 166 4.2E-28 T 14-10-2018 BD65_1250 7a3404ce121bc396e26bc21299736f32 395 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 157 185 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BD65_1250 7a3404ce121bc396e26bc21299736f32 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 157 185 2.2E-32 T 14-10-2018 IPR003004 GspF/PilC family BD65_1250 7a3404ce121bc396e26bc21299736f32 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 360 374 2.2E-32 T 14-10-2018 IPR003004 GspF/PilC family BD65_1250 7a3404ce121bc396e26bc21299736f32 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 376 395 2.2E-32 T 14-10-2018 IPR003004 GspF/PilC family BD65_1250 7a3404ce121bc396e26bc21299736f32 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 58 70 2.2E-32 T 14-10-2018 IPR003004 GspF/PilC family BD65_1250 7a3404ce121bc396e26bc21299736f32 395 Pfam PF00482 Type II secretion system (T2SS), protein F 62 185 6.9E-27 T 14-10-2018 IPR018076 Type II secretion system F domain BD65_1250 7a3404ce121bc396e26bc21299736f32 395 Pfam PF00482 Type II secretion system (T2SS), protein F 266 385 1.6E-23 T 14-10-2018 IPR018076 Type II secretion system F domain BD65_1637 7632ca17b4316cc325f3b15f62b4cb40 196 Gene3D G3DSA:1.20.1590.10 2 195 1.7E-63 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily BD65_1637 7632ca17b4316cc325f3b15f62b4cb40 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 4.7E-77 T 14-10-2018 IPR007338 Protein of unknown function DUF416 BD65_867 e241aac24a672d01cad5589d24fcc019 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 1.4E-12 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BD65_867 e241aac24a672d01cad5589d24fcc019 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 226 9.7E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_867 e241aac24a672d01cad5589d24fcc019 238 SUPERFAMILY SSF161098 17 214 3.01E-34 T 14-10-2018 IPR035906 MetI-like superfamily BD65_867 e241aac24a672d01cad5589d24fcc019 238 Gene3D G3DSA:1.10.3720.10 14 229 1.8E-40 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2430 10d29efe51c39fe08cb1335d61a350d1 782 SUPERFAMILY SSF74650 394 677 2.35E-62 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BD65_2430 10d29efe51c39fe08cb1335d61a350d1 782 SUPERFAMILY SSF49863 669 780 2.75E-14 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 BD65_2430 10d29efe51c39fe08cb1335d61a350d1 782 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 672 737 7.0E-7 T 14-10-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 BD65_2430 10d29efe51c39fe08cb1335d61a350d1 782 Gene3D G3DSA:1.50.10.100 14 392 2.7E-117 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 BD65_2430 10d29efe51c39fe08cb1335d61a350d1 782 SUPERFAMILY SSF48230 15 388 2.75E-95 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 BD65_2430 10d29efe51c39fe08cb1335d61a350d1 782 Gene3D G3DSA:2.70.98.10 400 659 4.3E-70 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BD65_2430 10d29efe51c39fe08cb1335d61a350d1 782 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 25 354 1.4E-102 T 14-10-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical BD65_2430 10d29efe51c39fe08cb1335d61a350d1 782 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 398 657 8.3E-58 T 14-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 BD65_2430 10d29efe51c39fe08cb1335d61a350d1 782 Gene3D G3DSA:2.60.220.10 669 780 2.6E-14 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 BD65_1072 f36529094aa08e084d711d34d6ad3a40 171 SUPERFAMILY SSF53927 6 156 5.02E-58 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BD65_1072 f36529094aa08e084d711d34d6ad3a40 171 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 48.146 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BD65_1072 f36529094aa08e084d711d34d6ad3a40 171 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BD65_1072 f36529094aa08e084d711d34d6ad3a40 171 Gene3D G3DSA:3.40.140.10 1 165 2.4E-67 T 14-10-2018 BD65_1072 f36529094aa08e084d711d34d6ad3a40 171 Pfam PF14437 MafB19-like deaminase 6 152 3.1E-33 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BD65_2450 96dcbeb97dbab50bcce0af8df5fab620 192 Pfam PF01965 DJ-1/PfpI family 3 165 2.4E-30 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BD65_2450 96dcbeb97dbab50bcce0af8df5fab620 192 SUPERFAMILY SSF52317 3 168 9.54E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_2450 96dcbeb97dbab50bcce0af8df5fab620 192 Gene3D G3DSA:3.40.50.880 1 176 1.2E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BD65_2184 6bb716b867f2488c618772aefd81ccaa 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 3.3E-29 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BD65_2184 6bb716b867f2488c618772aefd81ccaa 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 3.3E-29 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BD65_2184 6bb716b867f2488c618772aefd81ccaa 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 3.3E-29 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BD65_2184 6bb716b867f2488c618772aefd81ccaa 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 3.3E-29 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BD65_2184 6bb716b867f2488c618772aefd81ccaa 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.3E-74 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 BD65_2184 6bb716b867f2488c618772aefd81ccaa 289 Gene3D G3DSA:3.40.50.300 1 289 9.1E-115 T 14-10-2018 BD65_2184 6bb716b867f2488c618772aefd81ccaa 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BD65_2184 6bb716b867f2488c618772aefd81ccaa 289 SUPERFAMILY SSF52540 4 286 6.01E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2537 9c3ecbb283bfe4a6b5bccd0d765272a4 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.2E-37 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BD65_2537 9c3ecbb283bfe4a6b5bccd0d765272a4 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 7.0E-95 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BD65_2537 9c3ecbb283bfe4a6b5bccd0d765272a4 200 Gene3D G3DSA:3.20.19.10 1 180 2.2E-76 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BD65_2537 9c3ecbb283bfe4a6b5bccd0d765272a4 200 SUPERFAMILY SSF52016 2 197 9.81E-59 T 14-10-2018 BD65_2537 9c3ecbb283bfe4a6b5bccd0d765272a4 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.984 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BD65_2224 0c43ed8feaec60004e202de1466ec5a1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 3.9E-44 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2224 0c43ed8feaec60004e202de1466ec5a1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.292 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2224 0c43ed8feaec60004e202de1466ec5a1 117 SUPERFAMILY SSF53137 3 115 1.29E-53 T 14-10-2018 BD65_2224 0c43ed8feaec60004e202de1466ec5a1 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 6.2E-46 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2224 0c43ed8feaec60004e202de1466ec5a1 117 Gene3D G3DSA:3.30.420.100 1 117 1.2E-46 T 14-10-2018 BD65_455 b3745a956d4742b16be092ea58e2d962 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 3.2E-176 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BD65_455 b3745a956d4742b16be092ea58e2d962 406 Gene3D G3DSA:3.90.1150.10 8 398 1.1E-165 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_455 b3745a956d4742b16be092ea58e2d962 406 SUPERFAMILY SSF53383 4 401 1.4E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_455 b3745a956d4742b16be092ea58e2d962 406 Gene3D G3DSA:3.40.640.10 36 297 1.1E-165 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_455 b3745a956d4742b16be092ea58e2d962 406 Pfam PF00266 Aminotransferase class-V 26 394 3.7E-152 T 14-10-2018 IPR000192 Aminotransferase class V domain BD65_455 b3745a956d4742b16be092ea58e2d962 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BD65_3064 d72d8037e9feddefe3e1bfd63ff64dff 256 Gene3D G3DSA:3.40.190.10 29 253 1.5E-86 T 14-10-2018 BD65_3064 d72d8037e9feddefe3e1bfd63ff64dff 256 PIRSF PIRSF004846 7 256 4.6E-79 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BD65_3064 d72d8037e9feddefe3e1bfd63ff64dff 256 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 33 252 1.1E-79 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BD65_3064 d72d8037e9feddefe3e1bfd63ff64dff 256 Gene3D G3DSA:3.40.190.10 106 217 1.5E-86 T 14-10-2018 BD65_3064 d72d8037e9feddefe3e1bfd63ff64dff 256 SUPERFAMILY SSF53850 26 255 6.29E-70 T 14-10-2018 BD65_3064 d72d8037e9feddefe3e1bfd63ff64dff 256 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 6.2E-47 T 14-10-2018 BD65_3212 0898de0e88543c0820756f309346420f 338 PIRSF PIRSF017617 1 338 1.2E-127 T 14-10-2018 IPR023603 Threonine aldolase BD65_3212 0898de0e88543c0820756f309346420f 338 SUPERFAMILY SSF53383 3 336 1.28E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_3212 0898de0e88543c0820756f309346420f 338 Gene3D G3DSA:3.90.1150.10 246 336 1.7E-26 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_3212 0898de0e88543c0820756f309346420f 338 Pfam PF01212 Beta-eliminating lyase 4 284 1.4E-95 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 BD65_3212 0898de0e88543c0820756f309346420f 338 Gene3D G3DSA:3.40.640.10 1 245 2.5E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_1990 eeeab97eb1b07ee5618aac68060f2ebd 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.127 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1990 eeeab97eb1b07ee5618aac68060f2ebd 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 88 1.0E-38 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1990 eeeab97eb1b07ee5618aac68060f2ebd 140 SUPERFAMILY SSF46604 90 138 1.12E-14 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1990 eeeab97eb1b07ee5618aac68060f2ebd 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 1.7E-28 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1990 eeeab97eb1b07ee5618aac68060f2ebd 140 Gene3D G3DSA:1.20.5.440 92 135 6.3E-19 T 14-10-2018 BD65_1990 eeeab97eb1b07ee5618aac68060f2ebd 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 2.9E-12 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BD65_1990 eeeab97eb1b07ee5618aac68060f2ebd 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 3.4E-45 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1990 eeeab97eb1b07ee5618aac68060f2ebd 140 Gene3D G3DSA:2.60.15.10 4 91 1.2E-31 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_1990 eeeab97eb1b07ee5618aac68060f2ebd 140 SUPERFAMILY SSF51344 4 87 6.93E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BD65_295 cc4d4d0e81a8f9d9b23b53a8a13e0baf 324 Gene3D G3DSA:3.40.190.10 92 303 9.0E-100 T 14-10-2018 BD65_295 cc4d4d0e81a8f9d9b23b53a8a13e0baf 324 Gene3D G3DSA:3.40.190.10 167 267 9.0E-100 T 14-10-2018 BD65_295 cc4d4d0e81a8f9d9b23b53a8a13e0baf 324 SUPERFAMILY SSF53850 91 322 2.74E-43 T 14-10-2018 BD65_295 cc4d4d0e81a8f9d9b23b53a8a13e0baf 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_295 cc4d4d0e81a8f9d9b23b53a8a13e0baf 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_295 cc4d4d0e81a8f9d9b23b53a8a13e0baf 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_295 cc4d4d0e81a8f9d9b23b53a8a13e0baf 324 Gene3D G3DSA:1.10.10.10 1 86 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_295 cc4d4d0e81a8f9d9b23b53a8a13e0baf 324 Pfam PF03466 LysR substrate binding domain 92 288 1.4E-40 T 14-10-2018 IPR005119 LysR, substrate-binding BD65_295 cc4d4d0e81a8f9d9b23b53a8a13e0baf 324 SUPERFAMILY SSF46785 1 85 7.39E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_295 cc4d4d0e81a8f9d9b23b53a8a13e0baf 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.4E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BD65_2362 61a19a8b0e5c1bf010360c02cd9f9071 339 Gene3D G3DSA:3.20.20.30 3 331 6.1E-99 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BD65_2362 61a19a8b0e5c1bf010360c02cd9f9071 339 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 328 5.9E-139 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 BD65_2362 61a19a8b0e5c1bf010360c02cd9f9071 339 Pfam PF00296 Luciferase-like monooxygenase 25 239 1.6E-31 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BD65_2362 61a19a8b0e5c1bf010360c02cd9f9071 339 SUPERFAMILY SSF51679 7 328 3.4E-82 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BD65_2429 f7fa483d68eab242e4c4a42237e3a042 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 16 230 1.6E-89 T 14-10-2018 IPR009331 Oligogalacturonate-specific porin BD65_2429 f7fa483d68eab242e4c4a42237e3a042 230 Gene3D G3DSA:2.40.160.40 23 230 7.8E-68 T 14-10-2018 BD65_2429 f7fa483d68eab242e4c4a42237e3a042 230 SUPERFAMILY SSF56935 50 230 4.58E-14 T 14-10-2018 BD65_1777 2515100cdd9196d149774e5295f1d805 352 SUPERFAMILY SSF160355 55 320 1.27E-82 T 14-10-2018 BD65_1777 2515100cdd9196d149774e5295f1d805 352 Pfam PF02706 Chain length determinant protein 16 95 3.6E-13 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BD65_1777 2515100cdd9196d149774e5295f1d805 352 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 9 349 57.726 T 14-10-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 BD65_599 e53a3c87050b980fdf307c34d8ad9ecf 109 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 33 103 1.0E-27 T 14-10-2018 BD65_599 e53a3c87050b980fdf307c34d8ad9ecf 109 Gene3D G3DSA:1.10.890.10 29 106 4.0E-34 T 14-10-2018 IPR038303 HNS-dependent expression A/B superfamily BD65_599 e53a3c87050b980fdf307c34d8ad9ecf 109 Pfam PF06411 HdeA/HdeB family 10 96 4.6E-23 T 14-10-2018 IPR010486 HNS-dependent expression A/B BD65_599 e53a3c87050b980fdf307c34d8ad9ecf 109 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 1 102 28.047 T 14-10-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 64.27 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 7.3E-114 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.8E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.8E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.8E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.8E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 SUPERFAMILY SSF51569 1 293 3.77E-96 T 14-10-2018 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 Gene3D G3DSA:3.20.20.70 1 293 1.8E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 3.1E-119 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 PIRSF PIRSF001365 1 293 8.9E-91 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_987 85adf2a3dc474f042d1e262e5d486ca9 293 SMART SM01130 1 291 4.8E-141 T 14-10-2018 IPR002220 DapA-like GO:0016829 BD65_1539 caa79653462eae2c1e17fade2186c15b 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 22.536 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 BD65_1539 caa79653462eae2c1e17fade2186c15b 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.0E-20 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 BD65_161 5bd80bb1a359c417a963cf5550965802 188 PIRSF PIRSF004690 1 187 9.1E-62 T 14-10-2018 IPR026269 Tat proofreading chaperone DmsD-type BD65_161 5bd80bb1a359c417a963cf5550965802 188 Pfam PF02613 Nitrate reductase delta subunit 48 147 3.8E-11 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone BD65_161 5bd80bb1a359c417a963cf5550965802 188 Gene3D G3DSA:1.10.3480.10 1 186 7.2E-31 T 14-10-2018 BD65_161 5bd80bb1a359c417a963cf5550965802 188 SUPERFAMILY SSF89155 2 180 2.22E-45 T 14-10-2018 IPR036411 TorD-like superfamily BD65_454 7b0751c21bb35d13b0a1f9fd97dafd4f 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 42.262 T 14-10-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 BD65_454 7b0751c21bb35d13b0a1f9fd97dafd4f 138 Gene3D G3DSA:3.90.1010.10 1 138 1.7E-53 T 14-10-2018 BD65_454 7b0751c21bb35d13b0a1f9fd97dafd4f 138 SUPERFAMILY SSF82649 3 136 6.8E-47 T 14-10-2018 BD65_454 7b0751c21bb35d13b0a1f9fd97dafd4f 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 5.6E-45 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like BD65_459 93bc05f9eab2fced503ed81a03644cf2 123 Gene3D G3DSA:2.60.300.12 18 123 1.1E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BD65_459 93bc05f9eab2fced503ed81a03644cf2 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 1.9E-17 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BD65_459 93bc05f9eab2fced503ed81a03644cf2 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 1.8E-31 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BD65_459 93bc05f9eab2fced503ed81a03644cf2 123 SUPERFAMILY SSF89360 19 112 1.37E-25 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BD65_459 93bc05f9eab2fced503ed81a03644cf2 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BD65_381 6abe64f5e50f56164f284e1f445ece58 201 Gene3D G3DSA:3.40.50.360 1 201 8.5E-68 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_381 6abe64f5e50f56164f284e1f445ece58 201 Pfam PF02525 Flavodoxin-like fold 3 196 9.3E-48 T 14-10-2018 IPR003680 Flavodoxin-like fold BD65_381 6abe64f5e50f56164f284e1f445ece58 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.818 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BD65_381 6abe64f5e50f56164f284e1f445ece58 201 SUPERFAMILY SSF52218 1 199 2.35E-60 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_2622 5ade67ce5f8c0c29b9f598c1fc8ab7db 119 PIRSF PIRSF006113 1 119 5.1E-54 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BD65_2622 5ade67ce5f8c0c29b9f598c1fc8ab7db 119 Gene3D G3DSA:3.30.479.10 1 119 2.1E-49 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 BD65_2622 5ade67ce5f8c0c29b9f598c1fc8ab7db 119 SUPERFAMILY SSF55620 3 119 2.39E-40 T 14-10-2018 BD65_2622 5ade67ce5f8c0c29b9f598c1fc8ab7db 119 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 118 1.7E-34 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BD65_2622 5ade67ce5f8c0c29b9f598c1fc8ab7db 119 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 1.2E-33 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BD65_110 16667247f042b161d8ae24173330d61b 300 SUPERFAMILY SSF103481 35 137 1.83E-13 T 14-10-2018 BD65_110 16667247f042b161d8ae24173330d61b 300 SUPERFAMILY SSF103481 189 288 1.23E-8 T 14-10-2018 BD65_110 16667247f042b161d8ae24173330d61b 300 Pfam PF00892 EamA-like transporter family 4 134 8.1E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_110 16667247f042b161d8ae24173330d61b 300 Pfam PF00892 EamA-like transporter family 150 285 3.0E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_307 e276311eaab626a2a17777d4a3cfa005 71 Pfam PF05433 Glycine zipper 2TM domain 34 70 6.6E-7 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 BD65_2446 57c58beb22c5c3acbbc79656b83f2cfb 408 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 173 404 6.0E-17 T 14-10-2018 BD65_2446 57c58beb22c5c3acbbc79656b83f2cfb 408 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 12 389 1.2E-159 T 14-10-2018 BD65_2446 57c58beb22c5c3acbbc79656b83f2cfb 408 Gene3D G3DSA:3.20.20.70 9 392 2.2E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_2446 57c58beb22c5c3acbbc79656b83f2cfb 408 Pfam PF13186 Iron-sulfur cluster-binding domain 282 341 1.4E-7 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain BD65_2446 57c58beb22c5c3acbbc79656b83f2cfb 408 SUPERFAMILY SSF102114 18 351 4.19E-39 T 14-10-2018 BD65_2446 57c58beb22c5c3acbbc79656b83f2cfb 408 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 281 370 3.8E-19 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain BD65_2446 57c58beb22c5c3acbbc79656b83f2cfb 408 Pfam PF04055 Radical SAM superfamily 19 188 2.8E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_883 a303d7e7ae88b1b6553ef198bc18fbee 491 Gene3D G3DSA:1.10.10.10 1 77 3.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_883 a303d7e7ae88b1b6553ef198bc18fbee 491 Gene3D G3DSA:3.90.1150.10 115 478 1.6E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BD65_883 a303d7e7ae88b1b6553ef198bc18fbee 491 Pfam PF00155 Aminotransferase class I and II 144 474 8.1E-29 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BD65_883 a303d7e7ae88b1b6553ef198bc18fbee 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.3E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_883 a303d7e7ae88b1b6553ef198bc18fbee 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.3E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_883 a303d7e7ae88b1b6553ef198bc18fbee 491 Gene3D G3DSA:3.40.640.10 153 371 1.6E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BD65_883 a303d7e7ae88b1b6553ef198bc18fbee 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 3.1E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_883 a303d7e7ae88b1b6553ef198bc18fbee 491 SMART SM00345 17 76 9.0E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BD65_883 a303d7e7ae88b1b6553ef198bc18fbee 491 SUPERFAMILY SSF53383 96 481 2.91E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BD65_883 a303d7e7ae88b1b6553ef198bc18fbee 491 SUPERFAMILY SSF46785 6 80 2.15E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_977 6cec2b20d7c460c24373b47d67b90939 157 Pfam PF12688 Tetratrico peptide repeat 37 153 1.5E-12 T 14-10-2018 BD65_977 6cec2b20d7c460c24373b47d67b90939 157 Gene3D G3DSA:1.25.40.10 46 151 5.6E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_977 6cec2b20d7c460c24373b47d67b90939 157 SUPERFAMILY SSF48452 8 149 7.97E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1304 360ad3e676c28d1f98019b141bf9f177 319 Gene3D G3DSA:3.40.50.20 7 114 5.3E-120 T 14-10-2018 BD65_1304 360ad3e676c28d1f98019b141bf9f177 319 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 3.9E-46 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BD65_1304 360ad3e676c28d1f98019b141bf9f177 319 SUPERFAMILY SSF56059 123 313 2.43E-57 T 14-10-2018 BD65_1304 360ad3e676c28d1f98019b141bf9f177 319 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 3.4E-80 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BD65_1304 360ad3e676c28d1f98019b141bf9f177 319 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 181.352 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BD65_1304 360ad3e676c28d1f98019b141bf9f177 319 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 313 5.2E-138 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BD65_1304 360ad3e676c28d1f98019b141bf9f177 319 Gene3D G3DSA:3.30.1490.20 137 201 5.3E-120 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BD65_1304 360ad3e676c28d1f98019b141bf9f177 319 SUPERFAMILY SSF52440 2 122 4.32E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BD65_1304 360ad3e676c28d1f98019b141bf9f177 319 Gene3D G3DSA:3.30.470.20 115 295 5.3E-120 T 14-10-2018 BD65_2191 423bac96cd907d594f97f1d805716ffa 183 SUPERFAMILY SSF52218 5 175 1.37E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_2191 423bac96cd907d594f97f1d805716ffa 183 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 182 50.631 T 14-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 BD65_2191 423bac96cd907d594f97f1d805716ffa 183 Pfam PF02525 Flavodoxin-like fold 6 173 2.7E-40 T 14-10-2018 IPR003680 Flavodoxin-like fold BD65_2191 423bac96cd907d594f97f1d805716ffa 183 Gene3D G3DSA:3.40.50.360 6 178 9.8E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_892 78154e12d3e8590abf932a66726dad0c 93 Pfam PF08891 YfcL protein 4 86 5.5E-36 T 14-10-2018 IPR014987 Uncharacterised protein family YfcL BD65_1583 804f5d2c763c2d799365d7060ed7c73b 124 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BD65_1583 804f5d2c763c2d799365d7060ed7c73b 124 Gene3D G3DSA:1.10.3830.10 2 122 2.8E-42 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BD65_1583 804f5d2c763c2d799365d7060ed7c73b 124 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 3.1E-35 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BD65_3254 666600198e9b70a34131605cf10b9fe3 297 Pfam PF01636 Phosphotransferase enzyme family 61 240 1.2E-6 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase BD65_3254 666600198e9b70a34131605cf10b9fe3 297 Gene3D G3DSA:3.90.1200.10 105 288 1.3E-8 T 14-10-2018 BD65_3254 666600198e9b70a34131605cf10b9fe3 297 SUPERFAMILY SSF56112 14 268 1.38E-18 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BD65_1454 3b9c69a24cd0f9f0140b97965696588f 1881 Pfam PF13332 Haemagluttinin repeat 651 730 6.4E-4 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_1454 3b9c69a24cd0f9f0140b97965696588f 1881 Pfam PF13332 Haemagluttinin repeat 885 1000 3.1E-5 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_1454 3b9c69a24cd0f9f0140b97965696588f 1881 Pfam PF13332 Haemagluttinin repeat 736 800 0.0042 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_1454 3b9c69a24cd0f9f0140b97965696588f 1881 Pfam PF13332 Haemagluttinin repeat 1031 1206 9.3E-45 T 14-10-2018 IPR025157 Hemagglutinin repeat BD65_1454 3b9c69a24cd0f9f0140b97965696588f 1881 Pfam PF04829 Pre-toxin domain with VENN motif 1546 1595 1.2E-22 T 14-10-2018 IPR006914 VENN motif-containing domain BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 Gene3D G3DSA:2.40.50.140 1 105 2.6E-35 T 14-10-2018 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 Gene3D G3DSA:3.30.930.10 118 578 1.9E-197 T 14-10-2018 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 SUPERFAMILY SSF55681 108 583 2.84E-105 T 14-10-2018 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 Gene3D G3DSA:3.30.1360.30 271 420 1.9E-197 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 SUPERFAMILY SSF50249 1 105 2.29E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 Pfam PF02938 GAD domain 307 406 1.1E-30 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.1E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 8.8E-274 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.492 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.7E-108 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_178 366932da2cb4491f5408d4e3d19f5aa8 598 SUPERFAMILY SSF55261 288 419 4.8E-45 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BD65_2091 29c3408e63fbae250e529256929d8a3e 317 Pfam PF00294 pfkB family carbohydrate kinase 4 311 3.3E-67 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BD65_2091 29c3408e63fbae250e529256929d8a3e 317 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 265 278 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BD65_2091 29c3408e63fbae250e529256929d8a3e 317 SUPERFAMILY SSF53613 1 310 1.71E-70 T 14-10-2018 IPR029056 Ribokinase-like BD65_2091 29c3408e63fbae250e529256929d8a3e 317 Gene3D G3DSA:3.40.1190.20 1 314 8.9E-85 T 14-10-2018 IPR029056 Ribokinase-like BD65_2001 16d115de0b7283de968887e87150ef5c 278 SMART SM00062 34 257 7.6E-66 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_2001 16d115de0b7283de968887e87150ef5c 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 255 2.8E-58 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_2001 16d115de0b7283de968887e87150ef5c 278 SUPERFAMILY SSF53850 1 256 4.71E-67 T 14-10-2018 BD65_2001 16d115de0b7283de968887e87150ef5c 278 Gene3D G3DSA:3.40.190.10 26 250 7.1E-64 T 14-10-2018 BD65_2001 16d115de0b7283de968887e87150ef5c 278 Gene3D G3DSA:3.40.190.10 122 215 7.1E-64 T 14-10-2018 BD65_2001 16d115de0b7283de968887e87150ef5c 278 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site BD65_2311 e1faad9643d6571391dadeb7ecc93204 249 Gene3D G3DSA:3.40.50.1820 2 249 2.0E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_2311 e1faad9643d6571391dadeb7ecc93204 249 SUPERFAMILY SSF53474 14 249 1.04E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_2311 e1faad9643d6571391dadeb7ecc93204 249 Pfam PF00326 Prolyl oligopeptidase family 49 234 8.8E-15 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BD65_1129 ee43dcd1d085c0918a5c0403bac0f3f1 542 SUPERFAMILY SSF51905 23 355 3.63E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1129 ee43dcd1d085c0918a5c0403bac0f3f1 542 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 24 515 54.065 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 BD65_1129 ee43dcd1d085c0918a5c0403bac0f3f1 542 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 28 513 2.1E-211 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 BD65_1129 ee43dcd1d085c0918a5c0403bac0f3f1 542 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 27 515 1.3E-241 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 BD65_820 900a4b100d9a906778482601b34b0b70 397 Gene3D G3DSA:3.40.980.10 1 172 9.2E-50 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BD65_820 900a4b100d9a906778482601b34b0b70 397 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 397 113.629 T 14-10-2018 IPR008135 Competence-induced protein CinA BD65_820 900a4b100d9a906778482601b34b0b70 397 Pfam PF00994 Probable molybdopterin binding domain 6 170 8.7E-33 T 14-10-2018 IPR001453 MoaB/Mog domain BD65_820 900a4b100d9a906778482601b34b0b70 397 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 164 2.7E-32 T 14-10-2018 IPR001453 MoaB/Mog domain BD65_820 900a4b100d9a906778482601b34b0b70 397 SMART SM00852 5 172 3.5E-36 T 14-10-2018 IPR001453 MoaB/Mog domain BD65_820 900a4b100d9a906778482601b34b0b70 397 PIRSF PIRSF006728 1 385 7.5E-109 T 14-10-2018 IPR008135 Competence-induced protein CinA BD65_820 900a4b100d9a906778482601b34b0b70 397 SUPERFAMILY SSF142433 248 380 5.62E-6 T 14-10-2018 IPR036653 CinA-like, C-terminal BD65_820 900a4b100d9a906778482601b34b0b70 397 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 397 7.5E-123 T 14-10-2018 IPR008135 Competence-induced protein CinA BD65_820 900a4b100d9a906778482601b34b0b70 397 SUPERFAMILY SSF53218 2 201 7.46E-37 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BD65_361 b10c373366c73252f6bd41951e2cdf4b 320 SUPERFAMILY SSF52402 4 153 9.21E-28 T 14-10-2018 BD65_361 b10c373366c73252f6bd41951e2cdf4b 320 Gene3D G3DSA:3.40.50.12370 1 315 4.2E-130 T 14-10-2018 BD65_361 b10c373366c73252f6bd41951e2cdf4b 320 Pfam PF00582 Universal stress protein family 4 146 9.5E-18 T 14-10-2018 IPR006016 UspA BD65_361 b10c373366c73252f6bd41951e2cdf4b 320 Pfam PF00582 Universal stress protein family 176 300 9.8E-12 T 14-10-2018 IPR006016 UspA BD65_361 b10c373366c73252f6bd41951e2cdf4b 320 SUPERFAMILY SSF52402 156 307 5.02E-23 T 14-10-2018 BD65_2974 c2096a7ede35e224d44c78ba9383c1f0 241 SUPERFAMILY SSF52540 1 235 1.49E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2974 c2096a7ede35e224d44c78ba9383c1f0 241 PIRSF PIRSF039085 1 241 5.7E-105 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BD65_2974 c2096a7ede35e224d44c78ba9383c1f0 241 SMART SM00382 26 213 6.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2974 c2096a7ede35e224d44c78ba9383c1f0 241 Gene3D G3DSA:3.40.50.300 1 240 1.2E-76 T 14-10-2018 BD65_2974 c2096a7ede35e224d44c78ba9383c1f0 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2974 c2096a7ede35e224d44c78ba9383c1f0 241 Pfam PF00005 ABC transporter 17 165 1.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2129 fad385ff4caf23ec02c7eaf2c99725a6 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 1.0E-26 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BD65_2129 fad385ff4caf23ec02c7eaf2c99725a6 191 Pfam PF01106 NifU-like domain 111 177 1.2E-20 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BD65_2129 fad385ff4caf23ec02c7eaf2c99725a6 191 SUPERFAMILY SSF117916 95 184 5.45E-24 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BD65_2129 fad385ff4caf23ec02c7eaf2c99725a6 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 3.9E-12 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BD65_2129 fad385ff4caf23ec02c7eaf2c99725a6 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.274 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 BD65_2129 fad385ff4caf23ec02c7eaf2c99725a6 191 Gene3D G3DSA:3.30.300.130 106 191 2.9E-21 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BD65_2129 fad385ff4caf23ec02c7eaf2c99725a6 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 2.0E-101 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 BD65_2129 fad385ff4caf23ec02c7eaf2c99725a6 191 SUPERFAMILY SSF89360 1 97 4.12E-21 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BD65_2129 fad385ff4caf23ec02c7eaf2c99725a6 191 Gene3D G3DSA:2.60.300.12 1 98 1.9E-13 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BD65_2083 ff9e726c8a784eef5fc3d690ca14ee0b 245 Gene3D G3DSA:3.40.50.300 2 239 2.2E-29 T 14-10-2018 BD65_2083 ff9e726c8a784eef5fc3d690ca14ee0b 245 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 237 6.4E-104 T 14-10-2018 IPR017746 Cellulose synthase operon protein BcsQ BD65_2083 ff9e726c8a784eef5fc3d690ca14ee0b 245 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 240 7.6E-82 T 14-10-2018 IPR017746 Cellulose synthase operon protein BcsQ BD65_2083 ff9e726c8a784eef5fc3d690ca14ee0b 245 SUPERFAMILY SSF52540 1 236 1.92E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_193 b53c93c1fe0063015f16aa8dd001beb5 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 4.3E-85 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BD65_193 b53c93c1fe0063015f16aa8dd001beb5 213 Pfam PF01081 KDPG and KHG aldolase 9 203 5.8E-91 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BD65_193 b53c93c1fe0063015f16aa8dd001beb5 213 Gene3D G3DSA:3.20.20.70 1 211 3.6E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_193 b53c93c1fe0063015f16aa8dd001beb5 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BD65_193 b53c93c1fe0063015f16aa8dd001beb5 213 SUPERFAMILY SSF51569 4 208 6.59E-69 T 14-10-2018 BD65_193 b53c93c1fe0063015f16aa8dd001beb5 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BD65_1038 debab8daaba0224319e02eb80bcbfa4f 778 Pfam PF00905 Penicillin binding protein transpeptidase domain 304 423 1.5E-8 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BD65_1038 debab8daaba0224319e02eb80bcbfa4f 778 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 39 775 2.7E-246 T 14-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_1038 debab8daaba0224319e02eb80bcbfa4f 778 Gene3D G3DSA:1.10.3810.10 56 251 9.5E-54 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_1038 debab8daaba0224319e02eb80bcbfa4f 778 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 691 774 8.1E-17 T 14-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_1038 debab8daaba0224319e02eb80bcbfa4f 778 SUPERFAMILY SSF53955 40 260 1.97E-63 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_1038 debab8daaba0224319e02eb80bcbfa4f 778 SUPERFAMILY SSF56601 209 643 3.02E-91 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BD65_1038 debab8daaba0224319e02eb80bcbfa4f 778 Pfam PF00912 Transglycosylase 62 227 2.0E-51 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BD65_1038 debab8daaba0224319e02eb80bcbfa4f 778 Gene3D G3DSA:3.40.710.10 262 594 1.6E-63 T 14-10-2018 BD65_103 cfb02b5df8123958812e83ecd1caeabc 580 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_103 cfb02b5df8123958812e83ecd1caeabc 580 SUPERFAMILY SSF52540 321 556 9.52E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_103 cfb02b5df8123958812e83ecd1caeabc 580 Gene3D G3DSA:3.40.50.300 327 576 5.6E-69 T 14-10-2018 BD65_103 cfb02b5df8123958812e83ecd1caeabc 580 Pfam PF00005 ABC transporter 349 496 4.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_103 cfb02b5df8123958812e83ecd1caeabc 580 Gene3D G3DSA:1.20.1560.10 10 319 3.1E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_103 cfb02b5df8123958812e83ecd1caeabc 580 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 18 558 1.9E-237 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 BD65_103 cfb02b5df8123958812e83ecd1caeabc 580 Pfam PF00664 ABC transporter transmembrane region 27 280 1.5E-14 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BD65_103 cfb02b5df8123958812e83ecd1caeabc 580 SUPERFAMILY SSF90123 10 313 2.75E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_103 cfb02b5df8123958812e83ecd1caeabc 580 SMART SM00382 358 544 5.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1594 1978a75f99327fd5ac78c91aa7b9bfaf 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 25.773 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 BD65_1594 1978a75f99327fd5ac78c91aa7b9bfaf 135 Pfam PF06146 Phosphate-starvation-inducible E 60 122 3.1E-15 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like BD65_1594 1978a75f99327fd5ac78c91aa7b9bfaf 135 PIRSF PIRSF029598 1 135 2.2E-48 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 BD65_2892 f30090c1eb5c81ec45571d0263bc7286 268 Pfam PF01963 TraB family 35 265 8.0E-36 T 14-10-2018 IPR002816 Pheromone shutdown, TraB BD65_2360 9e3d3f2c935a7f84cebc1654ae721007 294 Gene3D G3DSA:1.25.40.10 20 294 2.6E-116 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2360 9e3d3f2c935a7f84cebc1654ae721007 294 SUPERFAMILY SSF48452 27 283 5.06E-74 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2360 9e3d3f2c935a7f84cebc1654ae721007 294 SMART SM00028 96 129 2.0E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_2360 9e3d3f2c935a7f84cebc1654ae721007 294 SMART SM00028 62 95 0.0033 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_2360 9e3d3f2c935a7f84cebc1654ae721007 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BD65_2360 9e3d3f2c935a7f84cebc1654ae721007 294 PIRSF PIRSF004654 1 292 4.0E-117 T 14-10-2018 IPR023605 Lipoprotein NlpI BD65_2360 9e3d3f2c935a7f84cebc1654ae721007 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 Pfam PF10135 Rod binding protein 49 95 6.0E-17 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 162 295 2.3E-19 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 295 3.4E-107 T 14-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 27 50 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 110 135 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 295 312 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 257 276 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 52 72 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 5.0E-100 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 Gene3D G3DSA:1.10.530.10 152 291 2.3E-45 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 Gene3D G3DSA:2.10.70.40 186 238 2.3E-45 T 14-10-2018 BD65_691 4cb8a0dd1c0891dcf44791685cf4fc5f 313 SMART SM00047 140 306 1.7E-42 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BD65_2712 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Gene3D G3DSA:3.30.70.1680 1 61 1.3E-31 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BD65_2712 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BD65_2712 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 59 17.134 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BD65_2712 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BD65_2712 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 59 1.3E-31 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BD65_2712 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BD65_1047 bc975d8d6830e308a281340d3b95d741 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 4.2E-69 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 BD65_1047 bc975d8d6830e308a281340d3b95d741 128 Gene3D G3DSA:3.90.1010.10 1 128 5.4E-58 T 14-10-2018 BD65_1047 bc975d8d6830e308a281340d3b95d741 128 SUPERFAMILY SSF82649 1 125 3.14E-47 T 14-10-2018 BD65_1047 bc975d8d6830e308a281340d3b95d741 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.5E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 BD65_551 5396c6297d07307e86494f23675d7934 121 Pfam PF13995 YebF-like protein 30 118 2.1E-38 T 14-10-2018 IPR025603 YebF/Colicin-M immunity protein BD65_551 5396c6297d07307e86494f23675d7934 121 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 28 117 5.0E-30 T 14-10-2018 IPR025603 YebF/Colicin-M immunity protein BD65_551 5396c6297d07307e86494f23675d7934 121 Gene3D G3DSA:3.10.450.300 24 121 2.7E-37 T 14-10-2018 IPR038703 YebF/Cmi superfamily BD65_869 6053a160047da8ac55f8a4590d4b5052 259 Gene3D G3DSA:3.40.190.10 113 213 5.3E-87 T 14-10-2018 BD65_869 6053a160047da8ac55f8a4590d4b5052 259 SMART SM00062 27 256 8.8E-77 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_869 6053a160047da8ac55f8a4590d4b5052 259 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 253 2.0E-95 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 BD65_869 6053a160047da8ac55f8a4590d4b5052 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site BD65_869 6053a160047da8ac55f8a4590d4b5052 259 SUPERFAMILY SSF53850 1 257 3.55E-68 T 14-10-2018 BD65_869 6053a160047da8ac55f8a4590d4b5052 259 Gene3D G3DSA:3.40.190.10 29 252 5.3E-87 T 14-10-2018 BD65_869 6053a160047da8ac55f8a4590d4b5052 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 1.5E-63 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_723 39021b7870e235e87f752b3d66ee6c7d 64 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 27.472 T 14-10-2018 IPR019717 Dextransucrase DSRB BD65_723 39021b7870e235e87f752b3d66ee6c7d 64 Pfam PF10781 Dextransucrase DSRB 1 60 1.9E-37 T 14-10-2018 IPR019717 Dextransucrase DSRB BD65_954 4a98017f30e2cf57958069ff3ab0501b 496 Pfam PF07690 Major Facilitator Superfamily 25 292 2.6E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_954 4a98017f30e2cf57958069ff3ab0501b 496 Gene3D G3DSA:1.20.1250.20 276 459 6.7E-21 T 14-10-2018 BD65_954 4a98017f30e2cf57958069ff3ab0501b 496 SUPERFAMILY SSF103473 8 455 1.83E-68 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_954 4a98017f30e2cf57958069ff3ab0501b 496 Hamap MF_01238 Sialic acid transporter NanT [nanT]. 1 496 49.075 T 14-10-2018 IPR004742 Sialic acid transporter GO:0015136|GO:0015739|GO:0016021 BD65_954 4a98017f30e2cf57958069ff3ab0501b 496 Gene3D G3DSA:1.20.1250.20 15 231 8.2E-42 T 14-10-2018 BD65_2192 98d6c02072d3e7fa427378f559cfb4aa 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 49.653 T 14-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 BD65_2192 98d6c02072d3e7fa427378f559cfb4aa 601 Gene3D G3DSA:1.20.1530.20 3 384 4.3E-81 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily BD65_2192 98d6c02072d3e7fa427378f559cfb4aa 601 Pfam PF00999 Sodium/hydrogen exchanger family 10 372 2.1E-65 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BD65_2192 98d6c02072d3e7fa427378f559cfb4aa 601 Gene3D G3DSA:3.40.50.720 399 560 1.2E-34 T 14-10-2018 BD65_2192 98d6c02072d3e7fa427378f559cfb4aa 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 282 9.0E-87 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 BD65_2192 98d6c02072d3e7fa427378f559cfb4aa 601 Pfam PF02254 TrkA-N domain 402 512 1.4E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BD65_2192 98d6c02072d3e7fa427378f559cfb4aa 601 SUPERFAMILY SSF51735 401 528 2.82E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_2939 a3a1afeeb3487fc3fce79423ec694b9d 428 Pfam PF00072 Response regulator receiver domain 13 124 1.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2939 a3a1afeeb3487fc3fce79423ec694b9d 428 Gene3D G3DSA:3.60.40.10 139 421 1.1E-56 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BD65_2939 a3a1afeeb3487fc3fce79423ec694b9d 428 SMART SM00448 11 124 1.0E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_2939 a3a1afeeb3487fc3fce79423ec694b9d 428 Gene3D G3DSA:3.40.50.2300 9 131 1.4E-32 T 14-10-2018 BD65_2939 a3a1afeeb3487fc3fce79423ec694b9d 428 SUPERFAMILY SSF52172 11 140 9.53E-35 T 14-10-2018 IPR011006 CheY-like superfamily BD65_2939 a3a1afeeb3487fc3fce79423ec694b9d 428 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 200 418 1.4E-34 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BD65_2939 a3a1afeeb3487fc3fce79423ec694b9d 428 SMART SM00331 173 418 5.8E-15 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BD65_1898 cece2d126418b3394b9b6fbe2c6ff456 335 Gene3D G3DSA:1.10.443.10 163 329 4.0E-39 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BD65_1898 cece2d126418b3394b9b6fbe2c6ff456 335 Pfam PF00589 Phage integrase family 267 307 2.7E-10 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_1898 cece2d126418b3394b9b6fbe2c6ff456 335 Pfam PF00589 Phage integrase family 164 237 8.5E-7 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BD65_1898 cece2d126418b3394b9b6fbe2c6ff456 335 SUPERFAMILY SSF56349 61 314 4.71E-42 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BD65_1414 37844f48213a932785c95edebc039979 233 ProSitePatterns PS00894 DeoR-type HTH domain signature. 14 48 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BD65_1414 37844f48213a932785c95edebc039979 233 Pfam PF13280 WYL domain 130 195 4.0E-6 T 14-10-2018 IPR026881 WYL domain BD65_830 58df7a9e2c533a868e7af2204a71b4fd 239 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 1 236 33.475 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 BD65_830 58df7a9e2c533a868e7af2204a71b4fd 239 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 1 235 2.1E-78 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 BD65_830 58df7a9e2c533a868e7af2204a71b4fd 239 Gene3D G3DSA:3.40.50.1820 1 236 6.1E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_830 58df7a9e2c533a868e7af2204a71b4fd 239 Pfam PF12697 Alpha/beta hydrolase family 1 229 7.1E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BD65_830 58df7a9e2c533a868e7af2204a71b4fd 239 SUPERFAMILY SSF53474 1 235 2.52E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_583 5315a0226a911524aea604702d198c80 233 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 85 221 2.0E-55 T 14-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP BD65_583 5315a0226a911524aea604702d198c80 233 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 36 233 41.807 T 14-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP BD65_583 5315a0226a911524aea604702d198c80 233 Gene3D G3DSA:2.40.160.20 74 233 7.5E-72 T 14-10-2018 BD65_583 5315a0226a911524aea604702d198c80 233 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 85 230 1.3E-68 T 14-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP BD65_583 5315a0226a911524aea604702d198c80 233 SUPERFAMILY SSF56925 76 233 7.06E-77 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BD65_3256 0d4f6ec36bf67064c9dd92cb3b1e5a69 262 Pfam PF13847 Methyltransferase domain 45 148 3.1E-18 T 14-10-2018 IPR025714 Methyltransferase domain BD65_3256 0d4f6ec36bf67064c9dd92cb3b1e5a69 262 Gene3D G3DSA:3.40.50.150 9 262 7.8E-70 T 14-10-2018 BD65_3256 0d4f6ec36bf67064c9dd92cb3b1e5a69 262 SUPERFAMILY SSF53335 4 256 7.12E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_3256 0d4f6ec36bf67064c9dd92cb3b1e5a69 262 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 256 41.626 T 14-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 BD65_1087 76c55811a55020735e182df31cd49790 217 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 1.3E-34 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 BD65_1087 76c55811a55020735e182df31cd49790 217 Gene3D G3DSA:1.10.10.880 1 66 1.3E-26 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 BD65_1087 76c55811a55020735e182df31cd49790 217 SUPERFAMILY SSF89069 1 66 2.22E-20 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 BD65_1087 76c55811a55020735e182df31cd49790 217 PIRSF PIRSF016938 1 205 1.6E-33 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 BD65_1087 76c55811a55020735e182df31cd49790 217 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 186 4.2E-20 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal BD65_1446 df3bc24240bf492905381bb14cc83595 241 Pfam PF07103 Protein of unknown function (DUF1365) 5 234 1.3E-71 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 BD65_739 020136af1de71e3ab93c94ec296b374d 503 Gene3D G3DSA:3.40.1080.10 2 232 3.3E-93 T 14-10-2018 BD65_739 020136af1de71e3ab93c94ec296b374d 503 SUPERFAMILY SSF100950 235 501 8.76E-58 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BD65_739 020136af1de71e3ab93c94ec296b374d 503 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 25 503 1.4E-235 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 BD65_739 020136af1de71e3ab93c94ec296b374d 503 PIRSF PIRSF009451 1 503 4.3E-255 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 BD65_739 020136af1de71e3ab93c94ec296b374d 503 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 37 501 4.5E-254 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 BD65_739 020136af1de71e3ab93c94ec296b374d 503 SUPERFAMILY SSF100950 29 231 6.28E-72 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BD65_739 020136af1de71e3ab93c94ec296b374d 503 Gene3D G3DSA:3.40.1080.10 234 503 1.1E-120 T 14-10-2018 BD65_468 ca45eb2e50556719a7c05864eb2adf87 352 Gene3D G3DSA:3.40.1570.10 82 339 4.1E-128 T 14-10-2018 BD65_468 ca45eb2e50556719a7c05864eb2adf87 352 SUPERFAMILY SSF144064 6 345 3.92E-124 T 14-10-2018 BD65_468 ca45eb2e50556719a7c05864eb2adf87 352 Pfam PF05171 Haemin-degrading HemS.ChuX domain 30 157 4.0E-38 T 14-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 BD65_468 ca45eb2e50556719a7c05864eb2adf87 352 Pfam PF05171 Haemin-degrading HemS.ChuX domain 206 345 2.4E-38 T 14-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 BD65_468 ca45eb2e50556719a7c05864eb2adf87 352 Gene3D G3DSA:3.40.1570.10 14 288 4.1E-128 T 14-10-2018 BD65_2531 efaf9f6d4b842f4e2de2ca64d4173297 255 Pfam PF09335 SNARE associated Golgi protein 36 159 3.8E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein BD65_1007 ef1bf36dbfb8933121ad0544ce608eae 169 SUPERFAMILY SSF49401 24 169 1.89E-21 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_1007 ef1bf36dbfb8933121ad0544ce608eae 169 Gene3D G3DSA:2.60.40.1090 21 169 3.5E-23 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 BD65_1007 ef1bf36dbfb8933121ad0544ce608eae 169 Pfam PF00419 Fimbrial protein 25 168 4.5E-11 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 BD65_67 358da8fdfff8ccd04e7a849694fbef68 129 Pfam PF07233 Protein of unknown function (DUF1425) 38 127 1.3E-24 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 BD65_67 358da8fdfff8ccd04e7a849694fbef68 129 Gene3D G3DSA:2.60.40.3230 24 128 1.3E-22 T 14-10-2018 IPR038483 YcfL-like superfamily BD65_861 dd2085fdbdc9349dfcde3418ffb379ab 182 SUPERFAMILY SSF55811 10 167 2.71E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_861 dd2085fdbdc9349dfcde3418ffb379ab 182 Gene3D G3DSA:3.90.79.10 2 178 1.7E-54 T 14-10-2018 BD65_861 dd2085fdbdc9349dfcde3418ffb379ab 182 Pfam PF00293 NUDIX domain 37 151 4.9E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_861 dd2085fdbdc9349dfcde3418ffb379ab 182 PIRSF PIRSF017340 2 171 4.8E-67 T 14-10-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 BD65_2517 95e4b30220f75dde90a5745af6e03eda 154 Pfam PF12821 Threonine/Serine exporter, ThrE 10 144 6.7E-37 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE BD65_2517 95e4b30220f75dde90a5745af6e03eda 154 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 154 35.643 T 14-10-2018 IPR020914 Uncharacterised protein family UPF0442 BD65_3263 470c6d7f03936766aacadaea4a8d70d3 527 Pfam PF00563 EAL domain 265 497 1.8E-59 T 14-10-2018 IPR001633 EAL domain BD65_3263 470c6d7f03936766aacadaea4a8d70d3 527 Gene3D G3DSA:3.20.20.450 258 514 3.1E-79 T 14-10-2018 IPR035919 EAL domain superfamily BD65_3263 470c6d7f03936766aacadaea4a8d70d3 527 Pfam PF12792 CSS motif domain associated with EAL 43 231 6.8E-29 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain BD65_3263 470c6d7f03936766aacadaea4a8d70d3 527 SMART SM00052 257 503 1.5E-97 T 14-10-2018 IPR001633 EAL domain BD65_3263 470c6d7f03936766aacadaea4a8d70d3 527 SUPERFAMILY SSF141868 263 511 3.92E-74 T 14-10-2018 IPR035919 EAL domain superfamily BD65_3128 e9b93a1aab88ad2811926aba705739ae 340 Gene3D G3DSA:3.10.580.10 20 148 9.9E-20 T 14-10-2018 BD65_3128 e9b93a1aab88ad2811926aba705739ae 340 SUPERFAMILY SSF161093 167 338 6.93E-48 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 BD65_3128 e9b93a1aab88ad2811926aba705739ae 340 Pfam PF00571 CBS domain 24 83 0.0057 T 14-10-2018 IPR000644 CBS domain BD65_3128 e9b93a1aab88ad2811926aba705739ae 340 Pfam PF01769 Divalent cation transporter 210 331 4.4E-26 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BD65_3128 e9b93a1aab88ad2811926aba705739ae 340 SUPERFAMILY SSF54631 23 163 5.18E-19 T 14-10-2018 BD65_3128 e9b93a1aab88ad2811926aba705739ae 340 Gene3D G3DSA:1.10.357.20 162 339 3.1E-52 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain BD65_1790 efb17041bfae97c7324a577101e70963 310 Pfam PF01063 Amino-transferase class IV 35 268 1.5E-48 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BD65_1790 efb17041bfae97c7324a577101e70963 310 SUPERFAMILY SSF56752 6 307 7.72E-104 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BD65_1790 efb17041bfae97c7324a577101e70963 310 Gene3D G3DSA:3.30.470.10 9 127 3.3E-110 T 14-10-2018 BD65_1790 efb17041bfae97c7324a577101e70963 310 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 307 8.7E-141 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 BD65_1790 efb17041bfae97c7324a577101e70963 310 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BD65_1790 efb17041bfae97c7324a577101e70963 310 Gene3D G3DSA:3.20.10.10 138 289 3.3E-110 T 14-10-2018 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 Gene3D G3DSA:3.10.150.10 124 247 2.8E-39 T 14-10-2018 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 7.3E-44 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 PIRSF PIRSF000804 1 366 3.0E-115 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 7.8E-38 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 5.3E-40 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 SUPERFAMILY SSF55979 1 121 4.35E-26 T 14-10-2018 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 9.2E-111 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 SUPERFAMILY SSF55979 125 244 8.64E-31 T 14-10-2018 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 Gene3D G3DSA:3.10.150.10 1 123 3.3E-42 T 14-10-2018 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 SMART SM00480 17 362 4.3E-164 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 Gene3D G3DSA:3.10.150.10 248 366 2.0E-41 T 14-10-2018 BD65_2018 6923b5af3c214dc8776dfcebddff25f2 366 SUPERFAMILY SSF55979 245 366 6.02E-37 T 14-10-2018 BD65_3262 014079051f37629b02c2fae97457e607 215 SMART SM00849 12 192 8.3E-41 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_3262 014079051f37629b02c2fae97457e607 215 Gene3D G3DSA:3.60.15.10 1 210 1.0E-84 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_3262 014079051f37629b02c2fae97457e607 215 SUPERFAMILY SSF56281 2 207 1.08E-59 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_3262 014079051f37629b02c2fae97457e607 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 3.7E-31 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_3226 d4f35a121367fac9fc1642b64cb76744 574 Pfam PF00664 ABC transporter transmembrane region 38 287 8.3E-9 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BD65_3226 d4f35a121367fac9fc1642b64cb76744 574 Gene3D G3DSA:3.40.50.300 330 574 4.4E-76 T 14-10-2018 BD65_3226 d4f35a121367fac9fc1642b64cb76744 574 SMART SM00382 365 550 1.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_3226 d4f35a121367fac9fc1642b64cb76744 574 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 11 534 2.8E-155 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 BD65_3226 d4f35a121367fac9fc1642b64cb76744 574 SUPERFAMILY SSF52540 335 572 2.72E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_3226 d4f35a121367fac9fc1642b64cb76744 574 SUPERFAMILY SSF90123 7 327 1.7E-39 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_3226 d4f35a121367fac9fc1642b64cb76744 574 Gene3D G3DSA:1.20.1560.10 1 321 1.1E-26 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_3226 d4f35a121367fac9fc1642b64cb76744 574 Pfam PF00005 ABC transporter 356 503 6.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_3226 d4f35a121367fac9fc1642b64cb76744 574 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_757 23b3e2f0319a68b385c2c0af9794b7d4 462 Pfam PF13520 Amino acid permease 53 421 5.5E-33 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_757 23b3e2f0319a68b385c2c0af9794b7d4 462 Gene3D G3DSA:1.20.1740.10 21 456 1.2E-63 T 14-10-2018 BD65_757 23b3e2f0319a68b385c2c0af9794b7d4 462 PIRSF PIRSF006060 5 458 3.3E-73 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_835 2c65472e8772b0223b5534d3a85fde79 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 1.0E-133 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 BD65_835 2c65472e8772b0223b5534d3a85fde79 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.728 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 BD65_835 2c65472e8772b0223b5534d3a85fde79 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 9.8E-84 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BD65_1352 bc42550f5cba3335bb4a06e26ac4cf35 272 SUPERFAMILY SSF51735 106 267 3.94E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1352 bc42550f5cba3335bb4a06e26ac4cf35 272 SUPERFAMILY SSF53223 9 105 3.8E-26 T 14-10-2018 BD65_1352 bc42550f5cba3335bb4a06e26ac4cf35 272 Gene3D G3DSA:3.40.50.720 104 272 1.1E-36 T 14-10-2018 BD65_1352 bc42550f5cba3335bb4a06e26ac4cf35 272 Gene3D G3DSA:3.40.50.10860 4 103 1.2E-32 T 14-10-2018 BD65_1352 bc42550f5cba3335bb4a06e26ac4cf35 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 93 1.8E-16 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BD65_1226 99858705a6b589c242caa65c44da3841 264 SUPERFAMILY SSF55831 1 264 3.53E-131 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 Pfam PF00303 Thymidylate synthase 2 264 1.4E-126 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 Gene3D G3DSA:3.30.572.10 1 264 5.3E-135 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 1.4E-41 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 3.5E-94 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.0E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.0E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.0E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.0E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.0E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_1226 99858705a6b589c242caa65c44da3841 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 39.988 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BD65_100 9959b9e3b4e3217f5795ad48c9b1053e 470 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 464 1.8E-116 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BD65_100 9959b9e3b4e3217f5795ad48c9b1053e 470 Pfam PF00939 Sodium:sulfate symporter transmembrane region 12 470 3.9E-141 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BD65_100 9959b9e3b4e3217f5795ad48c9b1053e 470 PIRSF PIRSF002457 3 470 5.7E-135 T 14-10-2018 IPR030676 Citrate carrier CitT-related BD65_513 c444ed64a22b4c75245960e31da85ae2 182 PIRSF PIRSF030780 1 182 8.4E-100 T 14-10-2018 IPR016956 Inner membrane protein YdjM BD65_513 c444ed64a22b4c75245960e31da85ae2 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 162 1.9E-35 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BD65_665 6b8f678200cf2373a9482032c645fc9d 427 Gene3D G3DSA:1.20.58.1830 1 61 9.3E-10 T 14-10-2018 BD65_665 6b8f678200cf2373a9482032c645fc9d 427 Gene3D G3DSA:1.20.1330.10 62 372 3.0E-53 T 14-10-2018 BD65_665 6b8f678200cf2373a9482032c645fc9d 427 Gene3D G3DSA:3.30.70.3070 166 326 3.0E-53 T 14-10-2018 BD65_665 6b8f678200cf2373a9482032c645fc9d 427 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 4.8E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BD65_665 6b8f678200cf2373a9482032c645fc9d 427 Gene3D G3DSA:1.10.8.410 375 427 3.9E-23 T 14-10-2018 BD65_665 6b8f678200cf2373a9482032c645fc9d 427 Pfam PF00700 Bacterial flagellin C-terminal helical region 342 426 2.6E-30 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BD65_665 6b8f678200cf2373a9482032c645fc9d 427 PRINTS PR00207 Flagellin signature 75 94 7.1E-30 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BD65_665 6b8f678200cf2373a9482032c645fc9d 427 PRINTS PR00207 Flagellin signature 36 53 7.1E-30 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BD65_665 6b8f678200cf2373a9482032c645fc9d 427 PRINTS PR00207 Flagellin signature 110 133 7.1E-30 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BD65_665 6b8f678200cf2373a9482032c645fc9d 427 SUPERFAMILY SSF64518 1 427 1.57E-96 T 14-10-2018 BD65_1311 6d5a2c17fd742e034d92dbef45955281 237 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 226 33.225 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BD65_1311 6d5a2c17fd742e034d92dbef45955281 237 Gene3D G3DSA:3.20.20.10 1 232 1.7E-82 T 14-10-2018 IPR029066 PLP-binding barrel BD65_1311 6d5a2c17fd742e034d92dbef45955281 237 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 6.6E-94 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BD65_1311 6d5a2c17fd742e034d92dbef45955281 237 Pfam PF01168 Alanine racemase, N-terminal domain 7 227 2.4E-28 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BD65_1311 6d5a2c17fd742e034d92dbef45955281 237 PIRSF PIRSF004848 1 232 6.4E-76 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BD65_1311 6d5a2c17fd742e034d92dbef45955281 237 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BD65_1311 6d5a2c17fd742e034d92dbef45955281 237 SUPERFAMILY SSF51419 1 225 6.15E-80 T 14-10-2018 IPR029066 PLP-binding barrel BD65_2546 20e77f32d4af05c8184140fc277c627d 146 Pfam PF06610 L-alanine exporter 4 142 8.0E-73 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 BD65_2546 20e77f32d4af05c8184140fc277c627d 146 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 145 36.158 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 BD65_2546 20e77f32d4af05c8184140fc277c627d 146 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 9 142 3.0E-52 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 BD65_2957 491d4889ad3c1e6d67742c5b6b8a9bee 147 Gene3D G3DSA:3.40.630.30 1 140 1.4E-31 T 14-10-2018 BD65_2957 491d4889ad3c1e6d67742c5b6b8a9bee 147 Pfam PF00583 Acetyltransferase (GNAT) family 33 129 5.2E-14 T 14-10-2018 IPR000182 GNAT domain BD65_2957 491d4889ad3c1e6d67742c5b6b8a9bee 147 SUPERFAMILY SSF55729 2 136 7.69E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_690 fe77434b436f833754a0af84e6d88017 547 SUPERFAMILY SSF64518 123 544 3.4E-41 T 14-10-2018 BD65_690 fe77434b436f833754a0af84e6d88017 547 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 369 3.5E-76 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 Pfam PF00460 Flagella basal body rod protein 6 35 6.1E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 361 383 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 441 460 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 409 426 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 513 537 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 466 487 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 PRINTS PR01005 Flagellar hook-associated protein signature 261 283 4.4E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BD65_690 fe77434b436f833754a0af84e6d88017 547 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 486 544 1.5E-6 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BD65_872 3c2e8413a50c52c8cd77660dfe4f15fd 169 Pfam PF02674 Colicin V production protein 4 142 3.0E-36 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 BD65_2074 e2dbd21572d23948c64dee5da93055dc 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 3.2E-105 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BD65_2074 e2dbd21572d23948c64dee5da93055dc 536 Gene3D G3DSA:3.10.105.10 292 510 6.7E-194 T 14-10-2018 BD65_2074 e2dbd21572d23948c64dee5da93055dc 536 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site BD65_2074 e2dbd21572d23948c64dee5da93055dc 536 Gene3D G3DSA:3.40.190.10 211 523 6.7E-194 T 14-10-2018 BD65_2074 e2dbd21572d23948c64dee5da93055dc 536 SUPERFAMILY SSF53850 29 532 4.52E-160 T 14-10-2018 BD65_2074 e2dbd21572d23948c64dee5da93055dc 536 Gene3D G3DSA:3.90.76.10 50 210 6.7E-194 T 14-10-2018 BD65_2074 e2dbd21572d23948c64dee5da93055dc 536 PIRSF PIRSF002741 22 536 2.2E-118 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BD65_2942 38ef5e4e209a9b2b04a486006b9f4f53 143 Gene3D G3DSA:3.30.565.10 1 142 1.4E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2942 38ef5e4e209a9b2b04a486006b9f4f53 143 SUPERFAMILY SSF55874 28 117 1.39E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BD65_2942 38ef5e4e209a9b2b04a486006b9f4f53 143 Pfam PF13581 Histidine kinase-like ATPase domain 6 136 1.7E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BD65_912 cd5569b81b59fa7e9a35d6b243b17e00 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 2.2E-95 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BD65_912 cd5569b81b59fa7e9a35d6b243b17e00 219 Pfam PF03379 CcmB protein 3 216 2.9E-92 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BD65_912 cd5569b81b59fa7e9a35d6b243b17e00 219 PIRSF PIRSF002764 1 219 1.8E-86 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BD65_912 cd5569b81b59fa7e9a35d6b243b17e00 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 1.7E-72 T 14-10-2018 BD65_912 cd5569b81b59fa7e9a35d6b243b17e00 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 1.7E-72 T 14-10-2018 BD65_912 cd5569b81b59fa7e9a35d6b243b17e00 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 1.7E-72 T 14-10-2018 BD65_912 cd5569b81b59fa7e9a35d6b243b17e00 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 1.7E-72 T 14-10-2018 BD65_912 cd5569b81b59fa7e9a35d6b243b17e00 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 1.7E-72 T 14-10-2018 BD65_912 cd5569b81b59fa7e9a35d6b243b17e00 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 1.7E-72 T 14-10-2018 BD65_2928 c88897b3949cb7dea7447e36458ed31d 266 Pfam PF00665 Integrase core domain 108 221 8.7E-27 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_2928 c88897b3949cb7dea7447e36458ed31d 266 Gene3D G3DSA:3.30.420.10 107 241 4.4E-21 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2928 c88897b3949cb7dea7447e36458ed31d 266 SUPERFAMILY SSF53098 101 261 3.29E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_951 a10d9db85c99e22e81bd128542f32581 291 SUPERFAMILY SSF161098 17 268 3.53E-55 T 14-10-2018 IPR035906 MetI-like superfamily BD65_951 a10d9db85c99e22e81bd128542f32581 291 Gene3D G3DSA:1.10.3720.10 21 276 3.5E-61 T 14-10-2018 IPR035906 MetI-like superfamily BD65_951 a10d9db85c99e22e81bd128542f32581 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 8.5E-116 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 BD65_951 a10d9db85c99e22e81bd128542f32581 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 267 8.3E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_951 a10d9db85c99e22e81bd128542f32581 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 16 275 4.6E-109 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 BD65_2852 782c4488c95a332b525e3a0a923f9794 84 SUPERFAMILY SSF143800 1 81 3.92E-21 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2852 782c4488c95a332b525e3a0a923f9794 84 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 25.905 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2852 782c4488c95a332b525e3a0a923f9794 84 PRINTS PR01249 Ribosomal protein L31 signature 59 77 5.5E-14 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2852 782c4488c95a332b525e3a0a923f9794 84 PRINTS PR01249 Ribosomal protein L31 signature 44 59 5.5E-14 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2852 782c4488c95a332b525e3a0a923f9794 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.5E-14 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2852 782c4488c95a332b525e3a0a923f9794 84 Gene3D G3DSA:2.30.170.50 1 83 8.6E-22 T 14-10-2018 BD65_2852 782c4488c95a332b525e3a0a923f9794 84 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 4.1E-16 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2852 782c4488c95a332b525e3a0a923f9794 84 Pfam PF01197 Ribosomal protein L31 1 78 3.8E-24 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_530 432ceff1f15e91d13a1f416d73d0f368 219 Gene3D G3DSA:3.40.50.10610 23 190 5.9E-66 T 14-10-2018 BD65_530 432ceff1f15e91d13a1f416d73d0f368 219 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 10 210 3.3E-94 T 14-10-2018 IPR008517 Protein of unknown function DUF799 BD65_2242 c29f93138c885f7ceeda33e9e1d6ac83 373 SUPERFAMILY SSF102405 76 283 1.05E-41 T 14-10-2018 BD65_2242 c29f93138c885f7ceeda33e9e1d6ac83 373 Gene3D G3DSA:3.40.50.450 3 285 1.6E-87 T 14-10-2018 BD65_2242 c29f93138c885f7ceeda33e9e1d6ac83 373 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 65 281 2.4E-81 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BD65_2242 c29f93138c885f7ceeda33e9e1d6ac83 373 Pfam PF02481 DNA recombination-mediator protein A 68 274 7.7E-76 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BD65_2364 5cd4e6c4432bda6d19f2c0f30c1ba468 441 PIRSF PIRSF006054 6 439 1.4E-160 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 BD65_2364 5cd4e6c4432bda6d19f2c0f30c1ba468 441 Pfam PF03313 Serine dehydratase alpha chain 91 432 2.9E-46 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit BD65_2364 5cd4e6c4432bda6d19f2c0f30c1ba468 441 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 437 34.055 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 BD65_1510 f05df75ef36fa14d5bc0737fc60188f7 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 6.8E-126 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BD65_1510 f05df75ef36fa14d5bc0737fc60188f7 328 SUPERFAMILY SSF53697 14 325 5.34E-67 T 14-10-2018 BD65_1510 f05df75ef36fa14d5bc0737fc60188f7 328 PIRSF PIRSF004692 2 328 1.8E-135 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BD65_1510 f05df75ef36fa14d5bc0737fc60188f7 328 Gene3D G3DSA:3.40.50.10490 10 200 3.6E-65 T 14-10-2018 BD65_1510 f05df75ef36fa14d5bc0737fc60188f7 328 Pfam PF00571 CBS domain 206 261 5.6E-6 T 14-10-2018 IPR000644 CBS domain BD65_1510 f05df75ef36fa14d5bc0737fc60188f7 328 Pfam PF00571 CBS domain 274 325 2.5E-6 T 14-10-2018 IPR000644 CBS domain BD65_1510 f05df75ef36fa14d5bc0737fc60188f7 328 Gene3D G3DSA:3.10.580.10 201 325 2.9E-47 T 14-10-2018 BD65_1510 f05df75ef36fa14d5bc0737fc60188f7 328 Pfam PF01380 SIS domain 46 177 1.0E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_2633 bf601da20399c523857bf8433dfe7edf 105 Pfam PF12084 Protein of unknown function (DUF3561) 1 104 4.0E-45 T 14-10-2018 IPR022721 Protein of unknown function DUF3561 BD65_2633 bf601da20399c523857bf8433dfe7edf 105 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 1 105 3.0E-36 T 14-10-2018 IPR022721 Protein of unknown function DUF3561 BD65_314 224f70d77bb3bf52b5eef2f6566280dd 361 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 19 359 1.5E-140 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 BD65_314 224f70d77bb3bf52b5eef2f6566280dd 361 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 14 360 28.31 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 BD65_314 224f70d77bb3bf52b5eef2f6566280dd 361 Pfam PF03116 NQR2, RnfD, RnfE family 16 358 1.6E-109 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 BD65_751 292d01b614e0c8e03cc0c3ae1a243e8f 238 Gene3D G3DSA:1.10.10.10 157 231 1.8E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_751 292d01b614e0c8e03cc0c3ae1a243e8f 238 SMART SM00419 175 223 0.0017 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BD65_751 292d01b614e0c8e03cc0c3ae1a243e8f 238 Gene3D G3DSA:2.60.120.10 10 155 8.0E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BD65_751 292d01b614e0c8e03cc0c3ae1a243e8f 238 SUPERFAMILY SSF51206 12 152 3.93E-25 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BD65_751 292d01b614e0c8e03cc0c3ae1a243e8f 238 SUPERFAMILY SSF46785 159 231 2.72E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_751 292d01b614e0c8e03cc0c3ae1a243e8f 238 Pfam PF13545 Crp-like helix-turn-helix domain 161 230 2.0E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BD65_751 292d01b614e0c8e03cc0c3ae1a243e8f 238 SMART SM00100 22 145 4.6E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BD65_751 292d01b614e0c8e03cc0c3ae1a243e8f 238 Pfam PF00027 Cyclic nucleotide-binding domain 42 129 1.7E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BD65_1748 d5ed2fa24030560d4abac305a6ea20cd 210 SUPERFAMILY SSF46689 19 80 3.88E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1748 d5ed2fa24030560d4abac305a6ea20cd 210 Gene3D G3DSA:1.10.357.10 21 174 1.3E-13 T 14-10-2018 BD65_1748 d5ed2fa24030560d4abac305a6ea20cd 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 69 8.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BD65_1641 20fa5fa2e01a2a546441913d9b8c132a 167 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 149 2.0E-56 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 BD65_1641 20fa5fa2e01a2a546441913d9b8c132a 167 Gene3D G3DSA:1.20.120.1370 1 153 7.2E-55 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily BD65_1641 20fa5fa2e01a2a546441913d9b8c132a 167 PIRSF PIRSF016548 1 161 9.3E-53 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 BD65_1641 20fa5fa2e01a2a546441913d9b8c132a 167 Hamap MF_01181 Regulator of sigma D [rsd]. 1 153 39.987 T 14-10-2018 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd BD65_3116 0d3403b825090e53ce2d7828d7ead2e1 296 SUPERFAMILY SSF103481 187 290 1.05E-13 T 14-10-2018 BD65_3116 0d3403b825090e53ce2d7828d7ead2e1 296 Pfam PF00892 EamA-like transporter family 16 144 7.1E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_3116 0d3403b825090e53ce2d7828d7ead2e1 296 Pfam PF00892 EamA-like transporter family 153 287 2.4E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_3116 0d3403b825090e53ce2d7828d7ead2e1 296 SUPERFAMILY SSF103481 45 147 3.79E-13 T 14-10-2018 BD65_3179 49e2e19777070bed642ce2cc6cb33760 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 213 2.1E-6 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BD65_3179 49e2e19777070bed642ce2cc6cb33760 275 Gene3D G3DSA:3.40.50.720 1 271 6.2E-59 T 14-10-2018 BD65_3179 49e2e19777070bed642ce2cc6cb33760 275 SUPERFAMILY SSF51735 1 267 8.86E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1399 3bb456d2e95cd2afd6ec9b58dcb273d7 215 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 4.0E-50 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BD65_1399 3bb456d2e95cd2afd6ec9b58dcb273d7 215 SMART SM01207 10 185 6.2E-83 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BD65_1399 3bb456d2e95cd2afd6ec9b58dcb273d7 215 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.636 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BD65_1399 3bb456d2e95cd2afd6ec9b58dcb273d7 215 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 6.5E-81 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BD65_556 a45bdf7a77cb90b74927882121557540 85 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 48 1.7E-26 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 BD65_556 a45bdf7a77cb90b74927882121557540 85 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 19.671 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 BD65_556 a45bdf7a77cb90b74927882121557540 85 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 46 6.0E-17 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 BD65_2282 1970f5bfea69f35cd90adef58e122317 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 48.64 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 BD65_2282 1970f5bfea69f35cd90adef58e122317 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 284 9.1E-92 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BD65_2282 1970f5bfea69f35cd90adef58e122317 293 Pfam PF02666 Phosphatidylserine decarboxylase 63 284 5.5E-60 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BD65_436 27711225b2a8bec9c2fd27eee7666e8f 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 132 5.7E-66 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BD65_436 27711225b2a8bec9c2fd27eee7666e8f 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.9E-25 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BD65_436 27711225b2a8bec9c2fd27eee7666e8f 135 SUPERFAMILY SSF54593 1 127 1.75E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BD65_436 27711225b2a8bec9c2fd27eee7666e8f 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BD65_436 27711225b2a8bec9c2fd27eee7666e8f 135 Gene3D G3DSA:3.10.180.10 1 131 1.3E-49 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 10 430 41.337 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 Gene3D G3DSA:3.40.50.1980 237 352 4.6E-124 T 14-10-2018 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 Gene3D G3DSA:3.40.50.1980 36 235 4.6E-124 T 14-10-2018 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 PIRSF PIRSF000099 3 433 2.2E-169 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 SUPERFAMILY SSF53720 11 434 6.28E-87 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 Pfam PF00815 Histidinol dehydrogenase 30 430 2.0E-167 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 2.3E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 2.3E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 PRINTS PR00083 Histidinol dehydrogenase signature 140 166 2.3E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 2.3E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 2.3E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 2.3E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 2.3E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 2.3E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3174 54daabadf8fefebaaf5078a93646c1a5 441 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 429 1.4E-162 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BD65_3030 0045071f1d109f47bc092d61e62bb06f 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 1.5E-90 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3030 0045071f1d109f47bc092d61e62bb06f 238 SUPERFAMILY SSF54292 1 106 3.18E-31 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BD65_3030 0045071f1d109f47bc092d61e62bb06f 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 7.8E-10 T 14-10-2018 BD65_3030 0045071f1d109f47bc092d61e62bb06f 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_3030 0045071f1d109f47bc092d61e62bb06f 238 Gene3D G3DSA:1.10.1060.10 107 238 1.2E-58 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_3030 0045071f1d109f47bc092d61e62bb06f 238 SUPERFAMILY SSF46548 107 236 7.32E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BD65_3030 0045071f1d109f47bc092d61e62bb06f 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 3.1E-31 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BD65_3030 0045071f1d109f47bc092d61e62bb06f 238 Gene3D G3DSA:3.10.20.30 1 106 2.2E-34 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BD65_1900 690e65856854d6f3bd9b143c04b0ecb2 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.7E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_1900 690e65856854d6f3bd9b143c04b0ecb2 232 SUPERFAMILY SSF52172 1 188 2.13E-41 T 14-10-2018 IPR011006 CheY-like superfamily BD65_1900 690e65856854d6f3bd9b143c04b0ecb2 232 Pfam PF00072 Response regulator receiver domain 4 112 1.4E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1900 690e65856854d6f3bd9b143c04b0ecb2 232 SMART SM00448 2 111 1.1E-46 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BD65_1900 690e65856854d6f3bd9b143c04b0ecb2 232 Gene3D G3DSA:1.10.10.10 130 232 3.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1900 690e65856854d6f3bd9b143c04b0ecb2 232 SMART SM00862 152 228 6.8E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_1900 690e65856854d6f3bd9b143c04b0ecb2 232 Gene3D G3DSA:3.40.50.2300 1 129 3.7E-42 T 14-10-2018 BD65_532 55f28cfb6e7c7da079770532980788e0 223 SUPERFAMILY SSF52964 46 143 1.31E-8 T 14-10-2018 BD65_532 55f28cfb6e7c7da079770532980788e0 223 Pfam PF03783 Curli production assembly/transport component CsgG 40 220 5.9E-31 T 14-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 BD65_532 55f28cfb6e7c7da079770532980788e0 223 Gene3D G3DSA:3.40.50.10610 50 223 4.1E-6 T 14-10-2018 BD65_1519 17fc9a6874d2e122ed8a25533ba607c5 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.6E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_1519 17fc9a6874d2e122ed8a25533ba607c5 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.6E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_1519 17fc9a6874d2e122ed8a25533ba607c5 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.6E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_1519 17fc9a6874d2e122ed8a25533ba607c5 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 7.7E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_1519 17fc9a6874d2e122ed8a25533ba607c5 90 SUPERFAMILY SSF55594 4 90 3.01E-23 T 14-10-2018 IPR035895 HPr-like superfamily BD65_1519 17fc9a6874d2e122ed8a25533ba607c5 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BD65_1519 17fc9a6874d2e122ed8a25533ba607c5 90 Gene3D G3DSA:3.30.1340.10 1 85 7.3E-31 T 14-10-2018 IPR035895 HPr-like superfamily BD65_1519 17fc9a6874d2e122ed8a25533ba607c5 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 5.4E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BD65_1513 d8f92f3fb590e900686e41eba1b94655 181 Pfam PF03968 OstA-like protein 35 146 3.4E-28 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal BD65_1513 d8f92f3fb590e900686e41eba1b94655 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 164 7.6E-48 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 BD65_1513 d8f92f3fb590e900686e41eba1b94655 181 Gene3D G3DSA:2.60.450.10 25 162 1.8E-51 T 14-10-2018 BD65_1513 d8f92f3fb590e900686e41eba1b94655 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 165 25.696 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 BD65_2536 57a3d4836156f25631c40595d8414326 393 Gene3D G3DSA:1.20.1250.20 210 392 7.0E-18 T 14-10-2018 BD65_2536 57a3d4836156f25631c40595d8414326 393 Pfam PF07690 Major Facilitator Superfamily 19 346 2.3E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2536 57a3d4836156f25631c40595d8414326 393 Gene3D G3DSA:1.20.1250.20 10 201 2.1E-21 T 14-10-2018 BD65_2536 57a3d4836156f25631c40595d8414326 393 SUPERFAMILY SSF103473 10 391 3.01E-49 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_3192 9a9b87c8e7388ecbde5b4d7ef8612b7b 246 SUPERFAMILY SSF48317 27 238 2.94E-12 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BD65_3192 9a9b87c8e7388ecbde5b4d7ef8612b7b 246 Pfam PF01569 PAP2 superfamily 116 235 1.9E-7 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BD65_3192 9a9b87c8e7388ecbde5b4d7ef8612b7b 246 Gene3D G3DSA:1.20.144.10 155 246 8.8E-6 T 14-10-2018 BD65_255 8d02b6bf1a411246a09c91000d1b8be5 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 75 3.7E-14 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BD65_255 8d02b6bf1a411246a09c91000d1b8be5 301 Gene3D G3DSA:1.10.3720.10 99 297 3.0E-16 T 14-10-2018 IPR035906 MetI-like superfamily BD65_255 8d02b6bf1a411246a09c91000d1b8be5 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 7.6E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_255 8d02b6bf1a411246a09c91000d1b8be5 301 SUPERFAMILY SSF161098 99 282 4.71E-23 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2881 2785ecc6732655abe0ba578f2b843604 219 PIRSF PIRSF011491 1 219 1.6E-90 T 14-10-2018 IPR016584 Methyltransferase VrtF-like BD65_2881 2785ecc6732655abe0ba578f2b843604 219 Pfam PF08241 Methyltransferase domain 54 150 1.1E-8 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BD65_2881 2785ecc6732655abe0ba578f2b843604 219 Gene3D G3DSA:3.40.50.150 24 216 6.7E-14 T 14-10-2018 BD65_2881 2785ecc6732655abe0ba578f2b843604 219 SUPERFAMILY SSF53335 11 183 8.05E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_2848 0ab8da1b284ebbbc3b617447b59b653c 287 Pfam PF13622 Thioesterase-like superfamily 33 282 7.8E-59 T 14-10-2018 BD65_2848 0ab8da1b284ebbbc3b617447b59b653c 287 Gene3D G3DSA:3.10.129.90 1 285 7.3E-114 T 14-10-2018 BD65_2848 0ab8da1b284ebbbc3b617447b59b653c 287 SUPERFAMILY SSF54637 5 114 7.47E-41 T 14-10-2018 IPR029069 HotDog domain superfamily BD65_2848 0ab8da1b284ebbbc3b617447b59b653c 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 13 283 7.2E-100 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 BD65_2848 0ab8da1b284ebbbc3b617447b59b653c 287 SUPERFAMILY SSF54637 116 283 2.34E-60 T 14-10-2018 IPR029069 HotDog domain superfamily BD65_18 ed068e0d24197e91ac1c8aebc9862706 150 PIRSF PIRSF028777 1 139 9.0E-54 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 BD65_18 ed068e0d24197e91ac1c8aebc9862706 150 Pfam PF03733 Inner membrane component domain 77 127 1.5E-18 T 14-10-2018 IPR005185 Inner membrane component domain BD65_18 ed068e0d24197e91ac1c8aebc9862706 150 Pfam PF03733 Inner membrane component domain 5 53 1.1E-9 T 14-10-2018 IPR005185 Inner membrane component domain BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 PIRSF PIRSF002869 1 511 2.9E-177 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 Pfam PF03023 MviN-like protein 28 477 7.1E-153 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 503 1.2E-166 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.327 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.1E-86 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.1E-86 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.1E-86 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.1E-86 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.1E-86 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.1E-86 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_167 2a96b849cae171abdb1c8f0a2c33b71a 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.1E-86 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BD65_2180 e216cf8154d662b82c4528700bca067a 417 Pfam PF13535 ATP-grasp domain 144 284 9.3E-16 T 14-10-2018 BD65_2180 e216cf8154d662b82c4528700bca067a 417 Gene3D G3DSA:3.30.470.20 101 409 8.9E-50 T 14-10-2018 BD65_2180 e216cf8154d662b82c4528700bca067a 417 SUPERFAMILY SSF56059 107 287 7.42E-24 T 14-10-2018 BD65_601 462ec90a89cce425312ce8d670eac296 163 Pfam PF13673 Acetyltransferase (GNAT) domain 52 139 3.0E-10 T 14-10-2018 IPR000182 GNAT domain BD65_601 462ec90a89cce425312ce8d670eac296 163 Gene3D G3DSA:3.40.630.30 1 160 4.7E-23 T 14-10-2018 BD65_601 462ec90a89cce425312ce8d670eac296 163 SUPERFAMILY SSF55729 1 155 1.6E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2933 c7f780ebfe5dfc1de79bcb86f60e0153 203 SUPERFAMILY SSF48452 52 175 1.59E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_2933 c7f780ebfe5dfc1de79bcb86f60e0153 203 Gene3D G3DSA:1.25.40.10 21 203 6.0E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_728 1a7605ff680b5f1cf9a5c4019f380af2 299 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 26 298 7.6E-113 T 14-10-2018 IPR021266 Kdo hydroxylase BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 2.6E-72 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 2.6E-72 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 2.6E-72 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 2.6E-72 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 2.6E-72 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 2.6E-72 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 2.6E-72 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 Pfam PF14842 FliG N-terminal domain 3 102 8.1E-31 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 SUPERFAMILY SSF48029 4 103 7.32E-21 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 SUPERFAMILY SSF48029 113 323 1.96E-62 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 Pfam PF14841 FliG middle domain 114 186 1.3E-24 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 Pfam PF01706 FliG C-terminal domain 216 322 1.1E-36 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 Gene3D G3DSA:1.10.220.30 88 191 2.2E-26 T 14-10-2018 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 PIRSF PIRSF003161 1 330 6.4E-116 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 Gene3D G3DSA:1.10.220.30 1 81 1.8E-19 T 14-10-2018 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 5.1E-138 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BD65_677 11ab29b13d1ca42be4804c3f8f810df0 330 Gene3D G3DSA:1.10.220.30 193 329 6.4E-41 T 14-10-2018 BD65_582 1d5021f260a783fd26ca8ae6972b72e1 38 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 3.9E-29 T 14-10-2018 IPR019672 Protein of unknown function DUF2627 BD65_2127 7d1bda49a0ae3ccc4da180554cfb9d77 801 Gene3D G3DSA:3.40.50.2000 61 798 0.0 T 14-10-2018 BD65_2127 7d1bda49a0ae3ccc4da180554cfb9d77 801 Pfam PF00343 Carbohydrate phosphorylase 94 798 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2127 7d1bda49a0ae3ccc4da180554cfb9d77 801 SUPERFAMILY SSF53756 6 799 4.71E-294 T 14-10-2018 BD65_2127 7d1bda49a0ae3ccc4da180554cfb9d77 801 Gene3D G3DSA:3.40.50.2000 457 784 0.0 T 14-10-2018 BD65_2127 7d1bda49a0ae3ccc4da180554cfb9d77 801 PIRSF PIRSF000460 2 801 2.1E-207 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2127 7d1bda49a0ae3ccc4da180554cfb9d77 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 798 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2127 7d1bda49a0ae3ccc4da180554cfb9d77 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 643 655 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BD65_2259 a7ca7bcb42c1567c41eb2442580ad125 107 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 1 107 37.137 T 14-10-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 BD65_2259 a7ca7bcb42c1567c41eb2442580ad125 107 Gene3D G3DSA:3.30.70.120 1 107 1.2E-39 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BD65_2259 a7ca7bcb42c1567c41eb2442580ad125 107 SUPERFAMILY SSF54913 4 106 1.89E-35 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BD65_2259 a7ca7bcb42c1567c41eb2442580ad125 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 104 1.1E-33 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 BD65_2908 dc02e98c00e0b849f8cba02d0833d253 161 Pfam PF15941 FidL-like putative membrane protein 72 158 1.1E-6 T 14-10-2018 IPR031854 Putative membrane protein FidL-like BD65_1975 de41a005294ba17407c0506bfb62fa78 488 SMART SM00327 324 488 8.2E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A BD65_1975 de41a005294ba17407c0506bfb62fa78 488 Hamap MF_01626 Protein ViaA [viaA]. 1 488 57.816 T 14-10-2018 IPR023481 Uncharacterised protein family ViaA BD65_1975 de41a005294ba17407c0506bfb62fa78 488 Pfam PF05762 VWA domain containing CoxE-like protein 313 441 1.7E-7 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like BD65_1975 de41a005294ba17407c0506bfb62fa78 488 SUPERFAMILY SSF53300 323 465 7.02E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BD65_1975 de41a005294ba17407c0506bfb62fa78 488 Gene3D G3DSA:3.40.50.410 326 469 6.0E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BD65_2166 b430486204e9954a65580cdbfa2b91a4 108 Gene3D G3DSA:2.102.10.10 1 108 5.1E-34 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BD65_2166 b430486204e9954a65580cdbfa2b91a4 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 8.6E-41 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BD65_2166 b430486204e9954a65580cdbfa2b91a4 108 SUPERFAMILY SSF50022 1 107 6.33E-36 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BD65_2166 b430486204e9954a65580cdbfa2b91a4 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 3.3E-38 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BD65_1874 8a0ec228a4e1401ba979f9a3eb3ce423 169 Pfam PF00959 Phage lysozyme 53 158 6.7E-19 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 BD65_1874 8a0ec228a4e1401ba979f9a3eb3ce423 169 SUPERFAMILY SSF53955 10 168 8.19E-54 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BD65_1874 8a0ec228a4e1401ba979f9a3eb3ce423 169 Gene3D G3DSA:1.10.530.40 6 169 3.4E-47 T 14-10-2018 BD65_2666 436f8966fb55d11c94afefdd53dbe41e 570 Gene3D G3DSA:3.30.1370.120 115 187 2.9E-24 T 14-10-2018 IPR038591 NolW-like superfamily BD65_2666 436f8966fb55d11c94afefdd53dbe41e 570 Pfam PF00263 Bacterial type II and III secretion system protein 367 526 9.1E-36 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 BD65_2666 436f8966fb55d11c94afefdd53dbe41e 570 Gene3D G3DSA:3.55.50.30 35 114 2.8E-27 T 14-10-2018 BD65_2666 436f8966fb55d11c94afefdd53dbe41e 570 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 203 220 1.5E-33 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BD65_2666 436f8966fb55d11c94afefdd53dbe41e 570 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 505 524 1.5E-33 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BD65_2666 436f8966fb55d11c94afefdd53dbe41e 570 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 379 398 1.5E-33 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BD65_2666 436f8966fb55d11c94afefdd53dbe41e 570 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 315 335 1.5E-33 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BD65_2666 436f8966fb55d11c94afefdd53dbe41e 570 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 413 428 1.5E-33 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BD65_2666 436f8966fb55d11c94afefdd53dbe41e 570 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 267 527 1.0E-83 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BD65_2666 436f8966fb55d11c94afefdd53dbe41e 570 Pfam PF03958 Bacterial type II/III secretion system short domain 191 313 9.7E-14 T 14-10-2018 IPR005644 NolW-like BD65_2821 42f113a3dd7006857a9d9397d4e6ec80 454 Pfam PF07690 Major Facilitator Superfamily 20 354 8.1E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2821 42f113a3dd7006857a9d9397d4e6ec80 454 SUPERFAMILY SSF103473 1 390 3.4E-60 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_2821 42f113a3dd7006857a9d9397d4e6ec80 454 Gene3D G3DSA:3.30.70.100 390 454 4.6E-27 T 14-10-2018 BD65_2821 42f113a3dd7006857a9d9397d4e6ec80 454 Gene3D G3DSA:1.20.1250.20 3 389 1.2E-98 T 14-10-2018 BD65_2710 11cbf1d815307eb475311e62d044ed4b 184 Gene3D G3DSA:1.10.10.10 1 38 3.9E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2710 11cbf1d815307eb475311e62d044ed4b 184 Hamap MF_01114 Regulatory protein RecX [recX]. 1 184 12.329 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BD65_2710 11cbf1d815307eb475311e62d044ed4b 184 Gene3D G3DSA:1.10.10.10 134 184 9.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2710 11cbf1d815307eb475311e62d044ed4b 184 Gene3D G3DSA:1.10.10.10 88 131 2.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2710 11cbf1d815307eb475311e62d044ed4b 184 Pfam PF02631 RecX family 67 180 5.1E-31 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BD65_2353 358e0f2c25ef1eae5ca4374b37c971e3 150 Pfam PF17384 RimP C-terminal SH3 domain 85 150 1.1E-21 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal BD65_2353 358e0f2c25ef1eae5ca4374b37c971e3 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 23.835 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 BD65_2353 358e0f2c25ef1eae5ca4374b37c971e3 150 SUPERFAMILY SSF74942 83 150 1.44E-16 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BD65_2353 358e0f2c25ef1eae5ca4374b37c971e3 150 Gene3D G3DSA:3.30.300.70 1 79 4.0E-25 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily BD65_2353 358e0f2c25ef1eae5ca4374b37c971e3 150 Pfam PF02576 RimP N-terminal domain 11 82 2.5E-28 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal BD65_2353 358e0f2c25ef1eae5ca4374b37c971e3 150 SUPERFAMILY SSF75420 3 82 1.7E-24 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily BD65_2530 43f0b09ba5bf2f9e59af698f63ae9fd4 233 SUPERFAMILY SSF52540 1 219 3.27E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2530 43f0b09ba5bf2f9e59af698f63ae9fd4 233 Pfam PF00005 ABC transporter 19 157 7.1E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_2530 43f0b09ba5bf2f9e59af698f63ae9fd4 233 SMART SM00382 24 214 1.3E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_2530 43f0b09ba5bf2f9e59af698f63ae9fd4 233 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 1.0E-104 T 14-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 BD65_2530 43f0b09ba5bf2f9e59af698f63ae9fd4 233 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_2530 43f0b09ba5bf2f9e59af698f63ae9fd4 233 Gene3D G3DSA:3.40.50.300 1 222 1.8E-64 T 14-10-2018 BD65_2913 650fff446edc5f320622bac374069e9d 163 SUPERFAMILY SSF49401 40 162 4.52E-20 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_2913 650fff446edc5f320622bac374069e9d 163 Gene3D G3DSA:2.60.40.1090 43 163 5.8E-29 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 BD65_2913 650fff446edc5f320622bac374069e9d 163 Pfam PF00419 Fimbrial protein 32 162 2.1E-11 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 BD65_2898 030aedd0655cc35c74793b0ada54184e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 4.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2898 030aedd0655cc35c74793b0ada54184e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2898 030aedd0655cc35c74793b0ada54184e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 4.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2898 030aedd0655cc35c74793b0ada54184e 258 Gene3D G3DSA:3.40.50.720 2 245 7.7E-61 T 14-10-2018 BD65_2898 030aedd0655cc35c74793b0ada54184e 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BD65_2898 030aedd0655cc35c74793b0ada54184e 258 Pfam PF00106 short chain dehydrogenase 3 191 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2898 030aedd0655cc35c74793b0ada54184e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.2E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2898 030aedd0655cc35c74793b0ada54184e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.2E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2898 030aedd0655cc35c74793b0ada54184e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.2E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2898 030aedd0655cc35c74793b0ada54184e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.2E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2898 030aedd0655cc35c74793b0ada54184e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_2898 030aedd0655cc35c74793b0ada54184e 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 4.1E-4 T 14-10-2018 BD65_2898 030aedd0655cc35c74793b0ada54184e 258 SUPERFAMILY SSF51735 2 237 3.4E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1302 bc70f06cc748663c599328cbd087d9bf 235 SUPERFAMILY SSF54060 25 230 3.53E-88 T 14-10-2018 BD65_1302 bc70f06cc748663c599328cbd087d9bf 235 Pfam PF04231 Endonuclease I 46 230 1.1E-42 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 BD65_244 61acc60adcb2a9dab404c9dde1e4b482 153 Pfam PF02810 SEC-C motif 136 153 6.2E-9 T 14-10-2018 IPR004027 SEC-C motif BD65_244 61acc60adcb2a9dab404c9dde1e4b482 153 Pfam PF02810 SEC-C motif 3 19 5.7E-5 T 14-10-2018 IPR004027 SEC-C motif BD65_244 61acc60adcb2a9dab404c9dde1e4b482 153 Gene3D G3DSA:3.10.450.50 2 153 2.8E-52 T 14-10-2018 BD65_244 61acc60adcb2a9dab404c9dde1e4b482 153 SUPERFAMILY SSF103642 133 153 2.62E-7 T 14-10-2018 BD65_244 61acc60adcb2a9dab404c9dde1e4b482 153 SUPERFAMILY SSF54427 25 130 8.76E-34 T 14-10-2018 IPR032710 NTF2-like domain superfamily BD65_244 61acc60adcb2a9dab404c9dde1e4b482 153 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 130 27.26 T 14-10-2018 IPR023006 Uncharacterised protein family UPF0225 BD65_1871 a1437633da19f846788f1bbe9896bb29 149 Pfam PF05069 Phage virion morphogenesis family 5 147 5.0E-31 T 14-10-2018 IPR006522 Phage virion morphogensis protein BD65_1871 a1437633da19f846788f1bbe9896bb29 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 8 147 2.1E-32 T 14-10-2018 IPR006522 Phage virion morphogensis protein BD65_130 a7e10e06f7d412b5c89d07b285b477a6 456 Gene3D G3DSA:2.30.40.10 9 433 2.2E-182 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_130 a7e10e06f7d412b5c89d07b285b477a6 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 2 453 3.3E-217 T 14-10-2018 IPR010252 Formiminoglutamate deiminase BD65_130 a7e10e06f7d412b5c89d07b285b477a6 456 SUPERFAMILY SSF51338 352 433 3.85E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_130 a7e10e06f7d412b5c89d07b285b477a6 456 Gene3D G3DSA:3.20.20.140 52 445 2.2E-182 T 14-10-2018 BD65_130 a7e10e06f7d412b5c89d07b285b477a6 456 Pfam PF01979 Amidohydrolase family 48 429 6.6E-31 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BD65_130 a7e10e06f7d412b5c89d07b285b477a6 456 SUPERFAMILY SSF51556 50 374 8.62E-70 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_3063 b38ec29423b37777018b3872b33c9356 45 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 45 16.153 T 14-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 BD65_3063 b38ec29423b37777018b3872b33c9356 45 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 2 45 3.8E-29 T 14-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 BD65_2328 a8225d6672291b4b04b262f29df9b1a8 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BD65_2328 a8225d6672291b4b04b262f29df9b1a8 176 SUPERFAMILY SSF50324 3 173 9.03E-67 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BD65_2328 a8225d6672291b4b04b262f29df9b1a8 176 Pfam PF00719 Inorganic pyrophosphatase 18 172 4.8E-55 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BD65_2328 a8225d6672291b4b04b262f29df9b1a8 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.726 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BD65_2328 a8225d6672291b4b04b262f29df9b1a8 176 Gene3D G3DSA:3.90.80.10 2 176 2.8E-70 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BD65_1593 36d6999990bf0744461cda600a976c8d 296 Gene3D G3DSA:1.10.3720.10 1 283 1.7E-73 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1593 36d6999990bf0744461cda600a976c8d 296 SUPERFAMILY SSF161098 8 296 1.59E-69 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1593 36d6999990bf0744461cda600a976c8d 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 286 3.9E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_2381 98d012adbf63fa30616af0bc413906d7 358 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 351 5.4E-156 T 14-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 BD65_2381 98d012adbf63fa30616af0bc413906d7 358 PIRSF PIRSF007313 1 358 2.2E-163 T 14-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 BD65_1613 1c099cda3e29298bd492cb0495a86f52 408 Pfam PF17482 Phage tail sheath C-terminal domain 292 397 1.6E-7 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain BD65_1138 45be67b7dd0d330b892188848f8a0f5a 78 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 7.8E-35 T 14-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 BD65_1138 45be67b7dd0d330b892188848f8a0f5a 78 Pfam PF00462 Glutaredoxin 3 61 1.1E-15 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BD65_1138 45be67b7dd0d330b892188848f8a0f5a 78 Gene3D G3DSA:3.40.30.10 1 78 3.4E-29 T 14-10-2018 BD65_1138 45be67b7dd0d330b892188848f8a0f5a 78 SUPERFAMILY SSF52833 1 72 1.05E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_1543 8c79ae1ba9e3cc369543e92ec59ebb40 1268 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 1 1265 0.0 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 BD65_1543 8c79ae1ba9e3cc369543e92ec59ebb40 1268 Pfam PF13116 Protein of unknown function 487 763 5.2E-91 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 BD65_1543 8c79ae1ba9e3cc369543e92ec59ebb40 1268 Pfam PF13502 AsmA-like C-terminal region 1011 1253 2.4E-55 T 14-10-2018 IPR032712 AsmA-like, C-terminal BD65_1217 0b5ae0c9dc7b886212aaf575c5651ea5 416 SUPERFAMILY SSF53187 188 407 1.04E-54 T 14-10-2018 BD65_1217 0b5ae0c9dc7b886212aaf575c5651ea5 416 Gene3D G3DSA:3.40.630.40 176 416 3.6E-91 T 14-10-2018 BD65_1217 0b5ae0c9dc7b886212aaf575c5651ea5 416 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 4.6E-51 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BD65_1217 0b5ae0c9dc7b886212aaf575c5651ea5 416 SMART SM00646 250 404 7.5E-67 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BD65_1217 0b5ae0c9dc7b886212aaf575c5651ea5 416 Pfam PF11741 AMIN domain 39 142 3.1E-28 T 14-10-2018 IPR021731 AMIN domain BD65_1217 0b5ae0c9dc7b886212aaf575c5651ea5 416 Gene3D G3DSA:2.60.40.3500 25 145 2.1E-35 T 14-10-2018 BD65_3199 30d4229c304955496fb8361514850131 321 Gene3D G3DSA:1.10.3720.10 33 316 1.9E-55 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3199 30d4229c304955496fb8361514850131 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 317 1.5E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_3199 30d4229c304955496fb8361514850131 321 SUPERFAMILY SSF161098 33 312 5.23E-57 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2858 646e483b818e54588c3df6b5950b27e4 55 Pfam PF10689 Protein of unknown function (DUF2496) 6 48 1.1E-24 T 14-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related BD65_517 2302b46135fe408b55bd214b9d1b13a7 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 7.7E-7 T 14-10-2018 BD65_517 2302b46135fe408b55bd214b9d1b13a7 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 7.7E-7 T 14-10-2018 BD65_517 2302b46135fe408b55bd214b9d1b13a7 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 7.7E-7 T 14-10-2018 BD65_517 2302b46135fe408b55bd214b9d1b13a7 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 7.7E-7 T 14-10-2018 BD65_517 2302b46135fe408b55bd214b9d1b13a7 461 Pfam PF07690 Major Facilitator Superfamily 21 412 2.4E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_517 2302b46135fe408b55bd214b9d1b13a7 461 SUPERFAMILY SSF103473 6 449 3.66E-62 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_517 2302b46135fe408b55bd214b9d1b13a7 461 Gene3D G3DSA:1.20.1250.20 262 456 3.1E-21 T 14-10-2018 BD65_517 2302b46135fe408b55bd214b9d1b13a7 461 Gene3D G3DSA:1.20.1720.10 17 250 4.0E-42 T 14-10-2018 BD65_1907 2328c352a2281529e28df7654e41fbdd 143 Gene3D G3DSA:3.40.250.10 37 143 1.7E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_1907 2328c352a2281529e28df7654e41fbdd 143 SUPERFAMILY SSF52821 15 142 3.27E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BD65_1907 2328c352a2281529e28df7654e41fbdd 143 Pfam PF00581 Rhodanese-like domain 43 133 7.1E-15 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_1907 2328c352a2281529e28df7654e41fbdd 143 SMART SM00450 40 138 1.4E-18 T 14-10-2018 IPR001763 Rhodanese-like domain BD65_2687 2ee06753196adb7b0c25089f010551ba 496 Gene3D G3DSA:2.10.10.20 434 496 9.9E-11 T 14-10-2018 BD65_2687 2ee06753196adb7b0c25089f010551ba 496 SUPERFAMILY SSF81296 22 193 5.32E-52 T 14-10-2018 IPR014756 Immunoglobulin E-set BD65_2687 2ee06753196adb7b0c25089f010551ba 496 Gene3D G3DSA:2.60.40.2550 316 410 4.8E-13 T 14-10-2018 BD65_2687 2ee06753196adb7b0c25089f010551ba 496 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 22 189 8.6E-32 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal BD65_2687 2ee06753196adb7b0c25089f010551ba 496 Gene3D G3DSA:3.30.70.2150 202 310 5.9E-32 T 14-10-2018 BD65_2687 2ee06753196adb7b0c25089f010551ba 496 SUPERFAMILY SSF51055 435 470 2.22E-8 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BD65_2687 2ee06753196adb7b0c25089f010551ba 496 Gene3D G3DSA:2.70.50.50 18 193 4.0E-67 T 14-10-2018 BD65_2687 2ee06753196adb7b0c25089f010551ba 496 SMART SM00495 437 489 4.8E-7 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BD65_3217 303b2c0d9751e2b02934dde4d0c02836 360 Pfam PF04393 Protein of unknown function (DUF535) 33 311 2.1E-98 T 14-10-2018 IPR007488 Protein of unknown function DUF535 BD65_3049 f3359cd7549b1f59b781965a8aec9cf6 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 70.38 T 14-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BD65_3049 f3359cd7549b1f59b781965a8aec9cf6 353 Gene3D G3DSA:3.40.50.10800 200 295 4.3E-94 T 14-10-2018 BD65_3049 f3359cd7549b1f59b781965a8aec9cf6 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 27 342 1.5E-120 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BD65_3049 f3359cd7549b1f59b781965a8aec9cf6 353 SUPERFAMILY SSF142754 29 341 4.97E-106 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BD65_3049 f3359cd7549b1f59b781965a8aec9cf6 353 Gene3D G3DSA:3.40.50.10800 115 340 4.3E-94 T 14-10-2018 BD65_3049 f3359cd7549b1f59b781965a8aec9cf6 353 Gene3D G3DSA:3.40.50.10800 31 322 4.3E-94 T 14-10-2018 BD65_3049 f3359cd7549b1f59b781965a8aec9cf6 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 9.8E-103 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BD65_1514 aff68556800911c919874bfd939e932d 241 SMART SM00382 28 231 3.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1514 aff68556800911c919874bfd939e932d 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1514 aff68556800911c919874bfd939e932d 241 Pfam PF00005 ABC transporter 20 166 5.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1514 aff68556800911c919874bfd939e932d 241 Gene3D G3DSA:3.40.50.300 2 241 1.3E-71 T 14-10-2018 BD65_1514 aff68556800911c919874bfd939e932d 241 SUPERFAMILY SSF52540 4 236 5.33E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1514 aff68556800911c919874bfd939e932d 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.0E-122 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 BD65_1514 aff68556800911c919874bfd939e932d 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 2.8E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BD65_1481 171969a2b0a85e143ec1d371f5714f97 654 Gene3D G3DSA:1.25.40.650 149 256 4.1E-43 T 14-10-2018 BD65_1481 171969a2b0a85e143ec1d371f5714f97 654 SUPERFAMILY SSF53822 259 651 2.83E-80 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_1481 171969a2b0a85e143ec1d371f5714f97 654 Gene3D G3DSA:1.25.40.10 25 148 1.5E-42 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1481 171969a2b0a85e143ec1d371f5714f97 654 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 648 37.046 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA BD65_1481 171969a2b0a85e143ec1d371f5714f97 654 Pfam PF04348 LppC putative lipoprotein 41 285 3.9E-51 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA BD65_1481 171969a2b0a85e143ec1d371f5714f97 654 Pfam PF04348 LppC putative lipoprotein 325 648 9.0E-91 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA BD65_916 8665790c4a0dcb13d221ca14887f284a 114 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 113 3.6E-51 T 14-10-2018 IPR004624 PhnA protein BD65_916 8665790c4a0dcb13d221ca14887f284a 114 Pfam PF03831 PhnA domain 46 113 1.3E-34 T 14-10-2018 IPR013988 PhnA protein, C-terminal BD65_916 8665790c4a0dcb13d221ca14887f284a 114 SUPERFAMILY SSF82057 40 113 2.01E-29 T 14-10-2018 BD65_916 8665790c4a0dcb13d221ca14887f284a 114 Pfam PF08274 PhnA Zinc-Ribbon 3 32 8.5E-13 T 14-10-2018 IPR013987 PhnA protein, N-terminal BD65_916 8665790c4a0dcb13d221ca14887f284a 114 Gene3D G3DSA:2.30.30.40 43 114 7.4E-36 T 14-10-2018 BD65_916 8665790c4a0dcb13d221ca14887f284a 114 Gene3D G3DSA:2.20.25.10 1 42 5.9E-15 T 14-10-2018 BD65_916 8665790c4a0dcb13d221ca14887f284a 114 SUPERFAMILY SSF57783 3 34 3.06E-12 T 14-10-2018 BD65_1308 63364fbb84fd4f039706024c147ba39d 291 Pfam PF00795 Carbon-nitrogen hydrolase 2 265 5.1E-55 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BD65_1308 63364fbb84fd4f039706024c147ba39d 291 SUPERFAMILY SSF56317 1 282 4.97E-81 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BD65_1308 63364fbb84fd4f039706024c147ba39d 291 Gene3D G3DSA:3.60.110.10 1 290 7.7E-105 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BD65_1308 63364fbb84fd4f039706024c147ba39d 291 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 1 281 1.8E-145 T 14-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 BD65_2394 6903a4f547a1d0de785ac5fce76ed9a6 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 6.3E-143 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 BD65_2394 6903a4f547a1d0de785ac5fce76ed9a6 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 7.0E-76 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 BD65_3250 46f906a3bceb6db0e5586de33121ea96 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 14-10-2018 IPR019844 Cold-shock conserved site BD65_3250 46f906a3bceb6db0e5586de33121ea96 69 Gene3D G3DSA:2.40.50.140 1 68 1.0E-29 T 14-10-2018 BD65_3250 46f906a3bceb6db0e5586de33121ea96 69 PIRSF PIRSF002599 1 69 2.6E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BD65_3250 46f906a3bceb6db0e5586de33121ea96 69 PRINTS PR00050 Cold shock protein signature 6 21 9.9E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3250 46f906a3bceb6db0e5586de33121ea96 69 PRINTS PR00050 Cold shock protein signature 27 36 9.9E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3250 46f906a3bceb6db0e5586de33121ea96 69 PRINTS PR00050 Cold shock protein signature 42 60 9.9E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3250 46f906a3bceb6db0e5586de33121ea96 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.7E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BD65_3250 46f906a3bceb6db0e5586de33121ea96 69 SUPERFAMILY SSF50249 4 68 1.01E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_3250 46f906a3bceb6db0e5586de33121ea96 69 SMART SM00357 5 69 2.2E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BD65_1022 5894516176023a4e922564351a7cdf8a 266 Gene3D G3DSA:3.40.1190.20 1 266 5.0E-99 T 14-10-2018 IPR029056 Ribokinase-like BD65_1022 5894516176023a4e922564351a7cdf8a 266 SUPERFAMILY SSF53613 5 266 1.04E-78 T 14-10-2018 IPR029056 Ribokinase-like BD65_1022 5894516176023a4e922564351a7cdf8a 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 1.0E-99 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BD65_1022 5894516176023a4e922564351a7cdf8a 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 5.5E-92 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BD65_832 8592b29cbd9d3d01bfb8994f581d56f1 451 Pfam PF00425 chorismate binding enzyme 184 435 1.8E-64 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BD65_832 8592b29cbd9d3d01bfb8994f581d56f1 451 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 93 442 6.9E-103 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BD65_832 8592b29cbd9d3d01bfb8994f581d56f1 451 Gene3D G3DSA:3.60.120.10 1 450 5.5E-149 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BD65_832 8592b29cbd9d3d01bfb8994f581d56f1 451 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 445 30.494 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BD65_832 8592b29cbd9d3d01bfb8994f581d56f1 451 SUPERFAMILY SSF56322 23 443 2.09E-97 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BD65_43 3e2d35cb6a017611e59246f1536d4417 371 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 73.81 T 14-10-2018 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 BD65_43 3e2d35cb6a017611e59246f1536d4417 371 Gene3D G3DSA:3.50.50.60 4 367 5.6E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_43 3e2d35cb6a017611e59246f1536d4417 371 SUPERFAMILY SSF51905 2 370 1.42E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_43 3e2d35cb6a017611e59246f1536d4417 371 Gene3D G3DSA:3.30.9.10 59 313 5.6E-126 T 14-10-2018 BD65_43 3e2d35cb6a017611e59246f1536d4417 371 Pfam PF01266 FAD dependent oxidoreductase 4 350 3.6E-45 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BD65_43 3e2d35cb6a017611e59246f1536d4417 371 SUPERFAMILY SSF54373 213 313 3.3E-19 T 14-10-2018 BD65_2762 f9e299cd4e44568b714ddb84bd8055bf 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.482 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 BD65_2762 f9e299cd4e44568b714ddb84bd8055bf 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 196 6.3E-104 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 BD65_2762 f9e299cd4e44568b714ddb84bd8055bf 198 PIRSF PIRSF006102 1 198 2.9E-64 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BD65_2762 f9e299cd4e44568b714ddb84bd8055bf 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.2E-58 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BD65_2684 0d232d02b8467612994ab42ecf375adf 144 SUPERFAMILY SSF69635 8 122 3.1E-11 T 14-10-2018 BD65_2684 0d232d02b8467612994ab42ecf375adf 144 Pfam PF05932 Tir chaperone protein (CesT) family 12 122 1.6E-9 T 14-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 BD65_2684 0d232d02b8467612994ab42ecf375adf 144 Gene3D G3DSA:3.30.1460.10 5 140 3.2E-15 T 14-10-2018 BD65_382 7f04033477a5eac60f0dc1de553e60e1 112 PIRSF PIRSF025560 1 112 3.3E-39 T 14-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 BD65_382 7f04033477a5eac60f0dc1de553e60e1 112 Pfam PF07027 Protein of unknown function (DUF1318) 25 112 2.0E-28 T 14-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 BD65_105 383b5a0715c8b859a918108567f1b6b4 448 SUPERFAMILY SSF56954 2 433 2.35E-71 T 14-10-2018 BD65_105 383b5a0715c8b859a918108567f1b6b4 448 Pfam PF02321 Outer membrane efflux protein 24 216 1.1E-19 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BD65_105 383b5a0715c8b859a918108567f1b6b4 448 Pfam PF02321 Outer membrane efflux protein 242 426 5.0E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BD65_105 383b5a0715c8b859a918108567f1b6b4 448 Gene3D G3DSA:1.20.1600.10 23 447 3.2E-82 T 14-10-2018 BD65_105 383b5a0715c8b859a918108567f1b6b4 448 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 443 4.1E-115 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 BD65_385 bcdae172a30dc87d91fe3dd092cd4d9c 884 Pfam PF11739 Dicarboxylate transport 660 861 7.6E-61 T 14-10-2018 IPR021730 Dicarboxylate transport BD65_569 e6e3487d819dde62a51b302825c96f54 289 Pfam PF00583 Acetyltransferase (GNAT) family 41 109 2.8E-10 T 14-10-2018 IPR000182 GNAT domain BD65_569 e6e3487d819dde62a51b302825c96f54 289 SUPERFAMILY SSF55729 12 269 4.56E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_569 e6e3487d819dde62a51b302825c96f54 289 Gene3D G3DSA:3.40.630.30 6 127 1.1E-12 T 14-10-2018 BD65_2403 ed0dcb9e050d870fbf0cfb39b7e8c269 666 Gene3D G3DSA:3.40.50.300 408 633 5.6E-8 T 14-10-2018 BD65_2403 ed0dcb9e050d870fbf0cfb39b7e8c269 666 Gene3D G3DSA:3.40.50.300 2 263 4.9E-24 T 14-10-2018 BD65_2403 ed0dcb9e050d870fbf0cfb39b7e8c269 666 Pfam PF13476 AAA domain 6 291 6.5E-8 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain BD65_2403 ed0dcb9e050d870fbf0cfb39b7e8c269 666 TIGRFAM TIGR03185 DNA_S_dndD: DNA sulfur modification protein DndD 2 658 3.5E-150 T 14-10-2018 IPR017599 DNA sulphur modification protein DndD BD65_2403 ed0dcb9e050d870fbf0cfb39b7e8c269 666 SUPERFAMILY SSF52540 3 624 5.97E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_514 fa10569967425bdb057f8f1c6c3612a4 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 1.1E-103 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BD65_514 fa10569967425bdb057f8f1c6c3612a4 463 SUPERFAMILY SSF118215 29 442 2.22E-99 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BD65_514 fa10569967425bdb057f8f1c6c3612a4 463 Gene3D G3DSA:1.10.3860.10 19 460 1.6E-108 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BD65_514 fa10569967425bdb057f8f1c6c3612a4 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 7.3E-26 T 14-10-2018 BD65_514 fa10569967425bdb057f8f1c6c3612a4 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 7.3E-26 T 14-10-2018 BD65_514 fa10569967425bdb057f8f1c6c3612a4 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 7.3E-26 T 14-10-2018 BD65_514 fa10569967425bdb057f8f1c6c3612a4 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 7.3E-26 T 14-10-2018 BD65_514 fa10569967425bdb057f8f1c6c3612a4 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 7.3E-26 T 14-10-2018 BD65_514 fa10569967425bdb057f8f1c6c3612a4 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 7.3E-26 T 14-10-2018 BD65_288 a27bce1a8d1be25b4308e2ab1951367f 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 2.0E-73 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 BD65_288 a27bce1a8d1be25b4308e2ab1951367f 206 Pfam PF01300 Telomere recombination 23 198 1.6E-46 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 BD65_288 a27bce1a8d1be25b4308e2ab1951367f 206 SUPERFAMILY SSF55821 1 203 7.02E-65 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BD65_288 a27bce1a8d1be25b4308e2ab1951367f 206 Gene3D G3DSA:3.90.870.10 1 206 3.5E-69 T 14-10-2018 BD65_863 2be14cb4a360ce0adbfc9f109d40a28d 234 Gene3D G3DSA:3.20.20.450 1 229 1.0E-40 T 14-10-2018 IPR035919 EAL domain superfamily BD65_863 2be14cb4a360ce0adbfc9f109d40a28d 234 SUPERFAMILY SSF141868 11 229 4.05E-21 T 14-10-2018 IPR035919 EAL domain superfamily BD65_863 2be14cb4a360ce0adbfc9f109d40a28d 234 SMART SM00052 1 223 2.9E-6 T 14-10-2018 IPR001633 EAL domain BD65_863 2be14cb4a360ce0adbfc9f109d40a28d 234 Pfam PF00563 EAL domain 13 218 2.4E-16 T 14-10-2018 IPR001633 EAL domain BD65_2984 55bc45e4b0176781c303a51cab55f7aa 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 3.2E-19 T 14-10-2018 BD65_2984 55bc45e4b0176781c303a51cab55f7aa 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 3.2E-19 T 14-10-2018 BD65_2984 55bc45e4b0176781c303a51cab55f7aa 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 3.2E-19 T 14-10-2018 BD65_2984 55bc45e4b0176781c303a51cab55f7aa 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 3.2E-19 T 14-10-2018 BD65_2984 55bc45e4b0176781c303a51cab55f7aa 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 392 1.7E-125 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BD65_2984 55bc45e4b0176781c303a51cab55f7aa 393 SUPERFAMILY SSF51905 8 384 2.22E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2984 55bc45e4b0176781c303a51cab55f7aa 393 Pfam PF01494 FAD binding domain 153 341 8.9E-21 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 BD65_2984 55bc45e4b0176781c303a51cab55f7aa 393 Pfam PF01494 FAD binding domain 8 80 7.4E-6 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 BD65_2984 55bc45e4b0176781c303a51cab55f7aa 393 Gene3D G3DSA:3.50.50.60 9 340 8.3E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_2984 55bc45e4b0176781c303a51cab55f7aa 393 Gene3D G3DSA:3.30.9.50 84 271 8.3E-105 T 14-10-2018 BD65_1647 5557062fd70a19710b0898af2ec57b9e 375 Pfam PF04055 Radical SAM superfamily 83 229 1.2E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BD65_1647 5557062fd70a19710b0898af2ec57b9e 375 SMART SM00876 259 362 7.2E-33 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BD65_1647 5557062fd70a19710b0898af2ec57b9e 375 Gene3D G3DSA:3.20.20.70 13 366 3.0E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1647 5557062fd70a19710b0898af2ec57b9e 375 SUPERFAMILY SSF102114 39 364 3.14E-55 T 14-10-2018 BD65_1647 5557062fd70a19710b0898af2ec57b9e 375 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 259 361 1.4E-23 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BD65_1647 5557062fd70a19710b0898af2ec57b9e 375 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 5 369 2.0E-166 T 14-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 BD65_2708 cb7223ce2aa580b77e9d7835a9786d86 164 SUPERFAMILY SSF142433 8 160 7.45E-57 T 14-10-2018 IPR036653 CinA-like, C-terminal BD65_2708 cb7223ce2aa580b77e9d7835a9786d86 164 Pfam PF02464 Competence-damaged protein 8 158 7.1E-58 T 14-10-2018 IPR008136 CinA, C-terminal BD65_2708 cb7223ce2aa580b77e9d7835a9786d86 164 Gene3D G3DSA:3.90.950.20 1 161 8.2E-60 T 14-10-2018 IPR036653 CinA-like, C-terminal BD65_2708 cb7223ce2aa580b77e9d7835a9786d86 164 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 157 2.5E-56 T 14-10-2018 IPR008136 CinA, C-terminal BD65_676 ccb1315508820edb6c69633901f7edbc 572 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 12 571 7.2E-175 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BD65_676 ccb1315508820edb6c69633901f7edbc 572 Pfam PF01514 Secretory protein of YscJ/FliF family 34 223 1.3E-73 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF BD65_676 ccb1315508820edb6c69633901f7edbc 572 Pfam PF08345 Flagellar M-ring protein C-terminal 255 450 1.2E-51 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal BD65_676 ccb1315508820edb6c69633901f7edbc 572 PIRSF PIRSF004862 5 572 3.5E-165 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BD65_676 ccb1315508820edb6c69633901f7edbc 572 PRINTS PR01009 Flagellar M-ring protein signature 199 217 1.7E-43 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BD65_676 ccb1315508820edb6c69633901f7edbc 572 PRINTS PR01009 Flagellar M-ring protein signature 376 400 1.7E-43 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BD65_676 ccb1315508820edb6c69633901f7edbc 572 PRINTS PR01009 Flagellar M-ring protein signature 268 286 1.7E-43 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BD65_676 ccb1315508820edb6c69633901f7edbc 572 PRINTS PR01009 Flagellar M-ring protein signature 124 142 1.7E-43 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BD65_676 ccb1315508820edb6c69633901f7edbc 572 PRINTS PR01009 Flagellar M-ring protein signature 156 170 1.7E-43 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BD65_676 ccb1315508820edb6c69633901f7edbc 572 Gene3D G3DSA:3.30.300.30 125 226 3.3E-10 T 14-10-2018 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 236 253 2.0E-66 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.0E-66 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 2.0E-66 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 2.0E-66 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 276 295 2.0E-66 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.0E-66 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 SUPERFAMILY SSF56935 22 365 1.18E-80 T 14-10-2018 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 Gene3D G3DSA:2.40.160.10 22 365 1.3E-151 T 14-10-2018 IPR023614 Porin domain superfamily BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 9.4E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 9.4E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 320 337 9.4E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 230 242 9.4E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 9.4E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_3117 13d7b8d25ba311492cd20737846dd538 365 Pfam PF00267 Gram-negative porin 27 365 2.1E-144 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 BD65_1754 5859b458d8df83ee1f26ce2ce4663edf 66 Pfam PF13627 Prokaryotic lipoprotein-attachment site 9 29 1.8E-8 T 14-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site BD65_1750 2454b3b4166dd69766ead837c44ab1cf 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 10 196 6.0E-13 T 14-10-2018 BD65_1750 2454b3b4166dd69766ead837c44ab1cf 238 SUPERFAMILY SSF56784 10 238 6.52E-39 T 14-10-2018 IPR036412 HAD-like superfamily BD65_1750 2454b3b4166dd69766ead837c44ab1cf 238 Gene3D G3DSA:1.20.120.1600 24 110 4.1E-60 T 14-10-2018 BD65_1750 2454b3b4166dd69766ead837c44ab1cf 238 Gene3D G3DSA:3.40.50.1000 12 231 4.1E-60 T 14-10-2018 IPR023214 HAD superfamily BD65_1750 2454b3b4166dd69766ead837c44ab1cf 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 201 1.4E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BD65_477 d5567c2b57c63fe5460b796c2584a388 555 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 10 240 1.5E-42 T 14-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 BD65_477 d5567c2b57c63fe5460b796c2584a388 555 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 4 554 43.581 T 14-10-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 BD65_254 5560322fcfba6e139be9bc3b94ddd4d8 306 SUPERFAMILY SSF161098 89 291 4.8E-21 T 14-10-2018 IPR035906 MetI-like superfamily BD65_254 5560322fcfba6e139be9bc3b94ddd4d8 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.8E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_254 5560322fcfba6e139be9bc3b94ddd4d8 306 Gene3D G3DSA:1.10.3720.10 84 301 9.1E-21 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1970 3bcaf36c13af5692e96636dae07516cf 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 6.4E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BD65_163 15a52f1ca96122fd2351f99a0be60bad 401 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 40.918 T 14-10-2018 IPR022855 Multidrug resistance protein MdtH BD65_163 15a52f1ca96122fd2351f99a0be60bad 401 Gene3D G3DSA:1.20.1250.20 13 386 5.2E-47 T 14-10-2018 BD65_163 15a52f1ca96122fd2351f99a0be60bad 401 SUPERFAMILY SSF103473 14 391 9.55E-53 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_163 15a52f1ca96122fd2351f99a0be60bad 401 Pfam PF07690 Major Facilitator Superfamily 20 241 4.3E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2724 6db0d5d11c8e151cdaf5999d2eb9efbb 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2724 6db0d5d11c8e151cdaf5999d2eb9efbb 82 SUPERFAMILY SSF54565 1 76 1.57E-28 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2724 6db0d5d11c8e151cdaf5999d2eb9efbb 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 4.8E-29 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2724 6db0d5d11c8e151cdaf5999d2eb9efbb 82 Gene3D G3DSA:3.30.1320.10 1 82 1.6E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2724 6db0d5d11c8e151cdaf5999d2eb9efbb 82 Pfam PF00886 Ribosomal protein S16 8 68 8.0E-24 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2724 6db0d5d11c8e151cdaf5999d2eb9efbb 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.043 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2851 579be5429774913806ff9a89d37e7fd8 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 117 1.0E-64 T 14-10-2018 IPR019693 Biofilm formation regulator YbaJ BD65_1873 97a04bd3fb84938bb2b8b7a1f3529031 141 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 3 135 2.6E-42 T 14-10-2018 IPR020000 Bacteriophage P2, LysB BD65_2472 c6e4bd3339c7078876a116d40fc79b74 390 Pfam PF01734 Patatin-like phospholipase 27 195 3.2E-20 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BD65_2472 c6e4bd3339c7078876a116d40fc79b74 390 Gene3D G3DSA:3.40.1090.10 16 140 3.3E-12 T 14-10-2018 BD65_2472 c6e4bd3339c7078876a116d40fc79b74 390 SUPERFAMILY SSF52151 22 280 3.92E-42 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BD65_1313 2befecf03613a836d0e01cf24adcfe37 184 Pfam PF02325 YGGT family 10 76 9.3E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 BD65_1313 2befecf03613a836d0e01cf24adcfe37 184 Pfam PF02325 YGGT family 108 171 1.3E-18 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 BD65_1050 3d2664d1369c0127a4e0289d21ad3c49 257 SUPERFAMILY SSF75217 3 173 2.68E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BD65_1050 3d2664d1369c0127a4e0289d21ad3c49 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 240 2.4E-88 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 BD65_1050 3d2664d1369c0127a4e0289d21ad3c49 257 PIRSF PIRSF004808 1 246 1.0E-76 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 BD65_1050 3d2664d1369c0127a4e0289d21ad3c49 257 Gene3D G3DSA:3.40.1280.10 1 164 3.6E-66 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BD65_1050 3d2664d1369c0127a4e0289d21ad3c49 257 Pfam PF00588 SpoU rRNA Methylase family 5 154 1.5E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BD65_1050 3d2664d1369c0127a4e0289d21ad3c49 257 Gene3D G3DSA:1.10.8.590 170 255 6.7E-34 T 14-10-2018 BD65_3002 385df800cc062be85a305b18ea79583c 151 Gene3D G3DSA:1.10.10.10 1 83 1.9E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_3002 385df800cc062be85a305b18ea79583c 151 SUPERFAMILY SSF46785 6 135 6.97E-43 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_3002 385df800cc062be85a305b18ea79583c 151 Gene3D G3DSA:3.30.1490.190 85 142 1.5E-22 T 14-10-2018 BD65_3002 385df800cc062be85a305b18ea79583c 151 Pfam PF01475 Ferric uptake regulator family 10 130 7.8E-48 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BD65_2870 43224866fd2cbd4b73193c78e925705c 294 SUPERFAMILY SSF51161 183 268 9.42E-6 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BD65_437 bc7649985b355dc8a130a020ce8f4f1f 217 SMART SM00479 18 203 6.6E-41 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BD65_437 bc7649985b355dc8a130a020ce8f4f1f 217 Hamap MF_00157 Ribonuclease T [rnt]. 1 217 118.576 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BD65_437 bc7649985b355dc8a130a020ce8f4f1f 217 Gene3D G3DSA:3.30.420.10 9 215 2.3E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_437 bc7649985b355dc8a130a020ce8f4f1f 217 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 1.2E-106 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BD65_437 bc7649985b355dc8a130a020ce8f4f1f 217 Pfam PF00929 Exonuclease 20 194 4.6E-39 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BD65_437 bc7649985b355dc8a130a020ce8f4f1f 217 SUPERFAMILY SSF53098 9 207 5.57E-58 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_458 b3c7e19b937d3f7fd54dde875fa39b73 503 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 494 8.8E-194 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 BD65_458 b3c7e19b937d3f7fd54dde875fa39b73 503 SUPERFAMILY SSF101960 41 500 4.18E-134 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BD65_458 b3c7e19b937d3f7fd54dde875fa39b73 503 Pfam PF01458 Uncharacterized protein family (UPF0051) 242 474 8.5E-67 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 BD65_675 b4f80726d342f53fc654c92c0188641d 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 103 5.0E-28 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BD65_675 b4f80726d342f53fc654c92c0188641d 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 21 104 1.2E-27 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BD65_675 b4f80726d342f53fc654c92c0188641d 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 104 18.046 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BD65_675 b4f80726d342f53fc654c92c0188641d 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 1.6E-17 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BD65_675 b4f80726d342f53fc654c92c0188641d 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 1.6E-17 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BD65_675 b4f80726d342f53fc654c92c0188641d 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 1.6E-17 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BD65_898 737b5198796c51788110223d5eb7a407 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 39.198 T 14-10-2018 IPR022990 Uncharacterised protein family UPF0115 BD65_898 737b5198796c51788110223d5eb7a407 176 SUPERFAMILY SSF160443 95 171 1.44E-10 T 14-10-2018 IPR036063 Smr domain superfamily BD65_898 737b5198796c51788110223d5eb7a407 176 Pfam PF01713 Smr domain 98 172 1.7E-19 T 14-10-2018 IPR002625 Smr domain BD65_898 737b5198796c51788110223d5eb7a407 176 SMART SM00463 95 173 2.7E-20 T 14-10-2018 IPR002625 Smr domain BD65_898 737b5198796c51788110223d5eb7a407 176 Gene3D G3DSA:3.30.1370.110 50 176 1.5E-30 T 14-10-2018 BD65_1443 63a9289a68c792ab24b65447bbf703f0 144 SUPERFAMILY SSF54427 5 123 1.13E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily BD65_1443 63a9289a68c792ab24b65447bbf703f0 144 Gene3D G3DSA:3.10.450.50 4 129 2.6E-16 T 14-10-2018 BD65_1443 63a9289a68c792ab24b65447bbf703f0 144 Pfam PF12680 SnoaL-like domain 12 112 2.5E-10 T 14-10-2018 IPR037401 SnoaL-like domain BD65_2226 93ef86ff92c0af51f1c7fae807ce2bc7 59 SUPERFAMILY SSF55129 3 59 2.22E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BD65_2226 93ef86ff92c0af51f1c7fae807ce2bc7 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 1.9E-19 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BD65_2226 93ef86ff92c0af51f1c7fae807ce2bc7 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site BD65_2226 93ef86ff92c0af51f1c7fae807ce2bc7 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 3.3E-26 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2226 93ef86ff92c0af51f1c7fae807ce2bc7 59 Gene3D G3DSA:3.30.1390.20 1 59 8.1E-27 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BD65_2226 93ef86ff92c0af51f1c7fae807ce2bc7 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.072 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2226 93ef86ff92c0af51f1c7fae807ce2bc7 59 PIRSF PIRSF002211 1 59 4.0E-28 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BD65_2639 b25f3ba895663a723c0044851a5644fd 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 206 7.0E-86 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BD65_2639 b25f3ba895663a723c0044851a5644fd 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BD65_2639 b25f3ba895663a723c0044851a5644fd 208 Gene3D G3DSA:3.40.50.150 1 206 1.3E-76 T 14-10-2018 BD65_2639 b25f3ba895663a723c0044851a5644fd 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 37.971 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BD65_2639 b25f3ba895663a723c0044851a5644fd 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 205 4.4E-74 T 14-10-2018 BD65_2639 b25f3ba895663a723c0044851a5644fd 208 SUPERFAMILY SSF53335 11 204 8.44E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BD65_3067 6110412a3df678cf7ab4c2c8ad98a97e 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 3.5E-23 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BD65_3067 6110412a3df678cf7ab4c2c8ad98a97e 273 SUPERFAMILY SSF56784 1 271 2.16E-65 T 14-10-2018 IPR036412 HAD-like superfamily BD65_3067 6110412a3df678cf7ab4c2c8ad98a97e 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 2.3E-63 T 14-10-2018 IPR000150 Cof family GO:0016787 BD65_3067 6110412a3df678cf7ab4c2c8ad98a97e 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 14-10-2018 BD65_3067 6110412a3df678cf7ab4c2c8ad98a97e 273 Gene3D G3DSA:3.30.1240.10 84 196 4.4E-59 T 14-10-2018 BD65_3067 6110412a3df678cf7ab4c2c8ad98a97e 273 Gene3D G3DSA:3.40.50.1000 4 267 4.4E-59 T 14-10-2018 IPR023214 HAD superfamily BD65_3067 6110412a3df678cf7ab4c2c8ad98a97e 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 4.9E-61 T 14-10-2018 BD65_3067 6110412a3df678cf7ab4c2c8ad98a97e 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 240 2.0E-5 T 14-10-2018 BD65_3067 6110412a3df678cf7ab4c2c8ad98a97e 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 256 2.0E-5 T 14-10-2018 BD65_3067 6110412a3df678cf7ab4c2c8ad98a97e 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 7 21 2.0E-5 T 14-10-2018 BD65_3101 97af35b8dd46df26a0961f6938d3e83a 82 Pfam PF04226 Transglycosylase associated protein 33 81 2.6E-16 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 BD65_1636 53f971a215c324349f1e4069303f0925 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.6E-32 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_1636 53f971a215c324349f1e4069303f0925 90 Gene3D G3DSA:4.10.520.10 1 90 5.9E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BD65_1636 53f971a215c324349f1e4069303f0925 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BD65_1636 53f971a215c324349f1e4069303f0925 90 SMART SM00411 1 90 2.4E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_1636 53f971a215c324349f1e4069303f0925 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.6E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_1636 53f971a215c324349f1e4069303f0925 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.6E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_1636 53f971a215c324349f1e4069303f0925 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.6E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BD65_1636 53f971a215c324349f1e4069303f0925 90 SUPERFAMILY SSF47729 1 90 8.83E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BD65_145 8a31854892a250fc9a6fe032fe4e2993 207 SUPERFAMILY SSF89392 37 206 9.02E-58 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BD65_145 8a31854892a250fc9a6fe032fe4e2993 207 Gene3D G3DSA:2.50.20.10 30 207 8.4E-63 T 14-10-2018 BD65_145 8a31854892a250fc9a6fe032fe4e2993 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.687 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BD65_145 8a31854892a250fc9a6fe032fe4e2993 207 Pfam PF03550 Outer membrane lipoprotein LolB 51 204 8.0E-50 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BD65_145 8a31854892a250fc9a6fe032fe4e2993 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 205 2.8E-75 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BD65_2798 9ca997528e49decfa1bc98c73338af54 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 54.033 T 14-10-2018 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 BD65_2798 9ca997528e49decfa1bc98c73338af54 193 PIRSF PIRSF011489 1 193 4.1E-79 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 BD65_2798 9ca997528e49decfa1bc98c73338af54 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.5E-30 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 BD65_1767 26837dd92c6feb63375913d2cb9cc694 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 59.009 T 14-10-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 BD65_1767 26837dd92c6feb63375913d2cb9cc694 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 62 237 2.9E-72 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 BD65_1767 26837dd92c6feb63375913d2cb9cc694 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 231 8.2E-53 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 BD65_1468 d9b10379b16cc2f46df1fc63de6b2a45 433 Gene3D G3DSA:1.20.1250.20 214 419 3.5E-27 T 14-10-2018 BD65_1468 d9b10379b16cc2f46df1fc63de6b2a45 433 SUPERFAMILY SSF103473 3 412 2.88E-79 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_1468 d9b10379b16cc2f46df1fc63de6b2a45 433 Gene3D G3DSA:1.20.1250.20 1 198 5.8E-46 T 14-10-2018 BD65_1468 d9b10379b16cc2f46df1fc63de6b2a45 433 Pfam PF07690 Major Facilitator Superfamily 16 308 7.0E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_1996 27c8643352d599121614bec60d3eaa84 346 PIRSF PIRSF002756 2 338 3.6E-106 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 BD65_1996 27c8643352d599121614bec60d3eaa84 346 Gene3D G3DSA:3.40.190.10 103 278 1.4E-129 T 14-10-2018 BD65_1996 27c8643352d599121614bec60d3eaa84 346 Pfam PF12849 PBP superfamily domain 23 307 1.2E-61 T 14-10-2018 IPR024370 PBP domain BD65_1996 27c8643352d599121614bec60d3eaa84 346 Gene3D G3DSA:3.40.190.10 29 326 1.4E-129 T 14-10-2018 BD65_1996 27c8643352d599121614bec60d3eaa84 346 SUPERFAMILY SSF53850 29 335 1.9E-97 T 14-10-2018 BD65_1996 27c8643352d599121614bec60d3eaa84 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 1.3E-127 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 BD65_280 943840e825502ee34bffb2add92d0b63 104 Pfam PF04972 BON domain 37 104 3.2E-21 T 14-10-2018 IPR007055 BON domain BD65_280 943840e825502ee34bffb2add92d0b63 104 SMART SM00749 42 104 9.8E-8 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria BD65_607 c788835bf9749ab73fe4600be776e7b3 253 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 250 40.214 T 14-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 BD65_607 c788835bf9749ab73fe4600be776e7b3 253 Pfam PF04794 YdjC-like protein 5 241 2.7E-64 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like BD65_607 c788835bf9749ab73fe4600be776e7b3 253 SUPERFAMILY SSF88713 1 252 3.33E-77 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BD65_607 c788835bf9749ab73fe4600be776e7b3 253 Gene3D G3DSA:3.20.20.370 1 253 6.8E-74 T 14-10-2018 BD65_1061 ba2d83967d4953884cda45ef04a5b714 295 SUPERFAMILY SSF51556 5 291 6.13E-94 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_1061 ba2d83967d4953884cda45ef04a5b714 295 PIRSF PIRSF016839 1 295 1.0E-118 T 14-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 BD65_1061 ba2d83967d4953884cda45ef04a5b714 295 Pfam PF02126 Phosphotriesterase family 4 290 4.1E-100 T 14-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 BD65_1061 ba2d83967d4953884cda45ef04a5b714 295 Gene3D G3DSA:3.20.20.140 3 291 2.4E-101 T 14-10-2018 BD65_3089 ca287f7d36ae4ab27333557fe491dc63 391 Pfam PF12698 ABC-2 family transporter protein 44 383 5.1E-40 T 14-10-2018 BD65_1773 2a6d86d91a651dede51f5b75bbc0b3d5 293 Gene3D G3DSA:3.90.550.10 1 293 5.0E-87 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_1773 2a6d86d91a651dede51f5b75bbc0b3d5 293 Pfam PF00483 Nucleotidyl transferase 2 238 4.1E-71 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BD65_1773 2a6d86d91a651dede51f5b75bbc0b3d5 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.1E-159 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 BD65_1773 2a6d86d91a651dede51f5b75bbc0b3d5 293 SUPERFAMILY SSF53448 1 286 1.15E-91 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_79 6603c381a60d0620af939a1e0d565518 278 Gene3D G3DSA:3.40.50.1220 41 261 6.7E-81 T 14-10-2018 BD65_79 6603c381a60d0620af939a1e0d565518 278 Gene3D G3DSA:3.30.1600.10 55 191 6.7E-81 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily BD65_79 6603c381a60d0620af939a1e0d565518 278 SUPERFAMILY SSF52467 41 267 8.31E-73 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BD65_79 6603c381a60d0620af939a1e0d565518 278 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 39 269 58.591 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 BD65_79 6603c381a60d0620af939a1e0d565518 278 Pfam PF02146 Sir2 family 46 219 1.2E-50 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 BD65_2869 93cb43c67f104787f849faacaa5ebc0b 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 3.5E-80 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BD65_2869 93cb43c67f104787f849faacaa5ebc0b 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 BD65_2869 93cb43c67f104787f849faacaa5ebc0b 201 SMART SM00493 81 166 1.8E-17 T 14-10-2018 IPR006171 TOPRIM domain BD65_2869 93cb43c67f104787f849faacaa5ebc0b 201 Gene3D G3DSA:1.10.8.420 1 53 5.5E-20 T 14-10-2018 BD65_2869 93cb43c67f104787f849faacaa5ebc0b 201 Pfam PF02132 RecR protein 41 77 1.0E-14 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger BD65_2869 93cb43c67f104787f849faacaa5ebc0b 201 SUPERFAMILY SSF111304 2 199 5.75E-71 T 14-10-2018 IPR023627 Recombination protein RecR BD65_2869 93cb43c67f104787f849faacaa5ebc0b 201 Gene3D G3DSA:3.40.1360.10 77 198 1.9E-38 T 14-10-2018 BD65_2869 93cb43c67f104787f849faacaa5ebc0b 201 Pfam PF13662 Toprim domain 82 172 3.1E-21 T 14-10-2018 IPR006171 TOPRIM domain BD65_2869 93cb43c67f104787f849faacaa5ebc0b 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.86 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BD65_1776 b3f67975fe8711e6910566cf0b2062a7 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 68.941 T 14-10-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 BD65_1776 b3f67975fe8711e6910566cf0b2062a7 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 1.9E-171 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 BD65_1776 b3f67975fe8711e6910566cf0b2062a7 376 SUPERFAMILY SSF53756 2 372 4.08E-143 T 14-10-2018 BD65_1776 b3f67975fe8711e6910566cf0b2062a7 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 3.3E-128 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_1776 b3f67975fe8711e6910566cf0b2062a7 376 Gene3D G3DSA:3.40.50.2000 187 356 2.8E-156 T 14-10-2018 BD65_1776 b3f67975fe8711e6910566cf0b2062a7 376 Gene3D G3DSA:3.40.50.2000 2 367 2.8E-156 T 14-10-2018 BD65_1377 f1f88ff1766de4ba1b4fe57f4ca62f8e 244 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 8.9E-49 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 BD65_1377 f1f88ff1766de4ba1b4fe57f4ca62f8e 244 SUPERFAMILY SSF69593 2 238 7.32E-64 T 14-10-2018 BD65_1377 f1f88ff1766de4ba1b4fe57f4ca62f8e 244 Pfam PF01553 Acyltransferase 59 180 2.5E-32 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BD65_1377 f1f88ff1766de4ba1b4fe57f4ca62f8e 244 SMART SM00563 67 182 2.4E-40 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BD65_563 5c2ff678208b04b3d2128f09c596aa9e 267 Pfam PF03609 PTS system sorbose-specific iic component 6 237 1.8E-75 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 BD65_563 5c2ff678208b04b3d2128f09c596aa9e 267 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 267 5.4E-126 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 BD65_1798 9bf767108600843b52725fde229b7582 102 Gene3D G3DSA:1.10.10.60 7 89 6.5E-9 T 14-10-2018 BD65_1798 9bf767108600843b52725fde229b7582 102 SUPERFAMILY SSF46689 1 93 1.38E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1798 9bf767108600843b52725fde229b7582 102 Pfam PF01527 Transposase 2 74 2.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_2458 294cd79be3e35dfcbf5a965bded69a09 210 Gene3D G3DSA:1.25.40.340 1 210 2.7E-71 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BD65_2458 294cd79be3e35dfcbf5a965bded69a09 210 SUPERFAMILY SSF101473 3 206 3.53E-58 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BD65_2458 294cd79be3e35dfcbf5a965bded69a09 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 6.5E-77 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 BD65_2458 294cd79be3e35dfcbf5a965bded69a09 210 SMART SM01120 32 206 1.5E-81 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BD65_2458 294cd79be3e35dfcbf5a965bded69a09 210 Pfam PF02734 DAK2 domain 32 205 2.6E-55 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BD65_2318 c585540074ecdac3134c1fa59fb95cb4 221 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 3.5E-19 T 14-10-2018 IPR019903 Repair of iron centres family BD65_2318 c585540074ecdac3134c1fa59fb95cb4 221 Gene3D G3DSA:1.20.120.520 67 220 4.2E-29 T 14-10-2018 BD65_2318 c585540074ecdac3134c1fa59fb95cb4 221 Pfam PF01814 Hemerythrin HHE cation binding domain 80 217 7.2E-23 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 BD65_2318 c585540074ecdac3134c1fa59fb95cb4 221 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 217 6.4E-77 T 14-10-2018 IPR019903 Repair of iron centres family BD65_46 89688889a8756c30ba576652e7d3648a 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 6.0E-149 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_46 89688889a8756c30ba576652e7d3648a 348 Gene3D G3DSA:3.20.20.140 6 348 2.0E-102 T 14-10-2018 BD65_46 89688889a8756c30ba576652e7d3648a 348 SUPERFAMILY SSF51556 6 347 1.33E-143 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_46 89688889a8756c30ba576652e7d3648a 348 PIRSF PIRSF001237 4 348 2.0E-140 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_46 89688889a8756c30ba576652e7d3648a 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_46 89688889a8756c30ba576652e7d3648a 348 Pfam PF01979 Amidohydrolase family 15 307 3.3E-19 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BD65_46 89688889a8756c30ba576652e7d3648a 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 46.498 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BD65_926 22c33ddd876c3287141edd1846367db7 158 Pfam PF05232 Chlorhexidine efflux transporter 74 137 5.5E-24 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter BD65_926 22c33ddd876c3287141edd1846367db7 158 Pfam PF05232 Chlorhexidine efflux transporter 6 67 5.2E-24 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter BD65_694 b6f8f1307b84d9abcfff66861b870c5b 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 6.2E-27 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BD65_694 b6f8f1307b84d9abcfff66861b870c5b 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 2.1E-120 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 BD65_694 b6f8f1307b84d9abcfff66861b870c5b 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-14 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BD65_694 b6f8f1307b84d9abcfff66861b870c5b 260 SUPERFAMILY SSF117143 93 222 5.1E-36 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BD65_694 b6f8f1307b84d9abcfff66861b870c5b 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BD65_694 b6f8f1307b84d9abcfff66861b870c5b 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.0E-49 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BD65_694 b6f8f1307b84d9abcfff66861b870c5b 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 2.2E-29 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BD65_3235 b606fcebd6544fb906608fe8576cbe0b 381 Gene3D G3DSA:1.20.1250.20 195 376 2.0E-18 T 14-10-2018 BD65_3235 b606fcebd6544fb906608fe8576cbe0b 381 SUPERFAMILY SSF103473 5 368 1.31E-43 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_3235 b606fcebd6544fb906608fe8576cbe0b 381 Gene3D G3DSA:1.20.1250.20 7 192 3.6E-19 T 14-10-2018 BD65_3235 b606fcebd6544fb906608fe8576cbe0b 381 Pfam PF07690 Major Facilitator Superfamily 209 374 4.0E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_3235 b606fcebd6544fb906608fe8576cbe0b 381 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 381 36.041 T 14-10-2018 IPR023745 MSF-type transporter, YcaD BD65_2101 4c9a8ca666aeb59559c9f46814fa599b 680 Pfam PF01432 Peptidase family M3 222 677 2.8E-169 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BD65_2101 4c9a8ca666aeb59559c9f46814fa599b 680 Gene3D G3DSA:1.10.1370.40 13 675 3.4E-266 T 14-10-2018 BD65_2101 4c9a8ca666aeb59559c9f46814fa599b 680 Gene3D G3DSA:1.10.1370.10 140 610 3.4E-266 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BD65_2101 4c9a8ca666aeb59559c9f46814fa599b 680 SUPERFAMILY SSF55486 1 677 1.26E-212 T 14-10-2018 BD65_957 1d6dced03a8d489a8e3f5b9eb69db82a 291 Pfam PF00480 ROK family 5 286 1.1E-71 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_957 1d6dced03a8d489a8e3f5b9eb69db82a 291 SUPERFAMILY SSF53067 5 287 1.56E-53 T 14-10-2018 BD65_957 1d6dced03a8d489a8e3f5b9eb69db82a 291 ProSitePatterns PS01125 ROK family signature. 129 156 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BD65_957 1d6dced03a8d489a8e3f5b9eb69db82a 291 Gene3D G3DSA:3.30.420.40 6 283 2.9E-79 T 14-10-2018 BD65_957 1d6dced03a8d489a8e3f5b9eb69db82a 291 Gene3D G3DSA:3.30.420.40 119 270 2.9E-79 T 14-10-2018 BD65_2094 f9b42e5d19cf3874ee92ac364762d56f 243 Gene3D G3DSA:3.30.428.30 15 239 2.3E-87 T 14-10-2018 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily KEGG: 00564+3.6.1.26 BD65_2094 f9b42e5d19cf3874ee92ac364762d56f 243 SUPERFAMILY SSF54197 19 237 1.62E-85 T 14-10-2018 IPR036265 HIT-like superfamily BD65_2094 f9b42e5d19cf3874ee92ac364762d56f 243 PIRSF PIRSF001273 1 242 2.0E-91 T 14-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 BD65_2094 f9b42e5d19cf3874ee92ac364762d56f 243 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 19 237 1.5E-88 T 14-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 BD65_1766 c093954b6ee8ad4890a823e8e41a15ee 456 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BD65_1766 c093954b6ee8ad4890a823e8e41a15ee 456 PIRSF PIRSF006060 1 456 4.0E-63 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_1766 c093954b6ee8ad4890a823e8e41a15ee 456 Pfam PF00324 Amino acid permease 18 430 2.9E-105 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BD65_1766 c093954b6ee8ad4890a823e8e41a15ee 456 Gene3D G3DSA:1.20.1740.10 11 456 3.6E-55 T 14-10-2018 BD65_182 0f095910eec96404aaae37aec76eeec1 204 Gene3D G3DSA:2.40.50.140 1 66 1.2E-25 T 14-10-2018 BD65_182 0f095910eec96404aaae37aec76eeec1 204 SUPERFAMILY SSF50249 2 63 1.2E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BD65_182 0f095910eec96404aaae37aec76eeec1 204 Pfam PF01330 RuvA N terminal domain 2 62 2.0E-18 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 BD65_182 0f095910eec96404aaae37aec76eeec1 204 SUPERFAMILY SSF47781 66 136 1.04E-22 T 14-10-2018 IPR010994 RuvA domain 2-like BD65_182 0f095910eec96404aaae37aec76eeec1 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 2.8E-68 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BD65_182 0f095910eec96404aaae37aec76eeec1 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 32.559 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BD65_182 0f095910eec96404aaae37aec76eeec1 204 SMART SM00278 108 127 0.15 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BD65_182 0f095910eec96404aaae37aec76eeec1 204 SMART SM00278 73 92 0.054 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BD65_182 0f095910eec96404aaae37aec76eeec1 204 Pfam PF07499 RuvA, C-terminal domain 160 202 1.5E-14 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 BD65_182 0f095910eec96404aaae37aec76eeec1 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.4E-17 T 14-10-2018 BD65_182 0f095910eec96404aaae37aec76eeec1 204 Gene3D G3DSA:1.10.150.20 67 142 5.7E-30 T 14-10-2018 BD65_182 0f095910eec96404aaae37aec76eeec1 204 Gene3D G3DSA:1.10.8.10 157 204 5.8E-24 T 14-10-2018 BD65_182 0f095910eec96404aaae37aec76eeec1 204 SUPERFAMILY SSF46929 159 202 5.49E-10 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily BD65_2415 f6acd4084a051a66e2ae0834be2d132c 1031 Gene3D G3DSA:3.90.1570.50 93 248 3.2E-22 T 14-10-2018 BD65_2415 f6acd4084a051a66e2ae0834be2d132c 1031 SUPERFAMILY SSF52540 206 428 8.05E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2415 f6acd4084a051a66e2ae0834be2d132c 1031 SUPERFAMILY SSF52540 388 685 4.59E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2415 f6acd4084a051a66e2ae0834be2d132c 1031 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 12 700 7.0E-166 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 BD65_2415 f6acd4084a051a66e2ae0834be2d132c 1031 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 198 6.8E-34 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 BD65_2415 f6acd4084a051a66e2ae0834be2d132c 1031 Pfam PF04851 Type III restriction enzyme, res subunit 254 422 6.3E-17 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BD65_2415 f6acd4084a051a66e2ae0834be2d132c 1031 Gene3D G3DSA:3.40.50.300 444 704 1.2E-43 T 14-10-2018 BD65_2415 f6acd4084a051a66e2ae0834be2d132c 1031 Gene3D G3DSA:3.40.50.300 250 442 9.5E-51 T 14-10-2018 BD65_2415 f6acd4084a051a66e2ae0834be2d132c 1031 SMART SM00487 246 459 8.0E-9 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_2768 a86d270f21e073b2d40e255058565ef0 486 Pfam PF01546 Peptidase family M20/M25/M40 72 480 1.1E-19 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 Gene3D G3DSA:3.40.630.10 362 486 3.4E-24 T 14-10-2018 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 PIRSF PIRSF016599 1 485 9.2E-212 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 4.7E-183 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 Pfam PF07687 Peptidase dimerisation domain 200 289 5.9E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain BD65_2768 a86d270f21e073b2d40e255058565ef0 486 SUPERFAMILY SSF53187 10 482 4.0E-66 T 14-10-2018 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 9.4E-98 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 9.4E-98 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 9.4E-98 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 9.4E-98 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 9.4E-98 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 9.4E-98 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 9.4E-98 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 9.4E-98 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 9.4E-98 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 BD65_2768 a86d270f21e073b2d40e255058565ef0 486 Gene3D G3DSA:3.40.630.10 1 230 1.4E-65 T 14-10-2018 BD65_1100 0c7d96bcd0f8f8b8bf2b3a395fa15f4f 94 Pfam PF03658 RnfH family Ubiquitin 6 86 1.1E-33 T 14-10-2018 IPR005346 RnfH protein BD65_1100 0c7d96bcd0f8f8b8bf2b3a395fa15f4f 94 Gene3D G3DSA:3.10.20.280 1 87 5.0E-33 T 14-10-2018 IPR037021 RnfH superfamily BD65_1100 0c7d96bcd0f8f8b8bf2b3a395fa15f4f 94 SUPERFAMILY SSF54285 4 78 5.43E-26 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BD65_1100 0c7d96bcd0f8f8b8bf2b3a395fa15f4f 94 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 24.788 T 14-10-2018 IPR005346 RnfH protein BD65_2971 8f7605aaab662ec3f6bf63ad87db2317 192 Pfam PF04390 Lipopolysaccharide-assembly 43 159 1.1E-14 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 BD65_2971 8f7605aaab662ec3f6bf63ad87db2317 192 Gene3D G3DSA:3.30.160.150 16 169 4.7E-63 T 14-10-2018 BD65_2971 8f7605aaab662ec3f6bf63ad87db2317 192 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 164 27.775 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 BD65_1885 6050ba2ae418cbc5c651ed39df7ab818 183 Pfam PF16473 3' exoribonuclease, RNase T-like 2 175 2.3E-48 T 14-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain BD65_1885 6050ba2ae418cbc5c651ed39df7ab818 183 Gene3D G3DSA:3.30.420.10 1 182 1.1E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_1885 6050ba2ae418cbc5c651ed39df7ab818 183 SUPERFAMILY SSF53098 1 173 1.25E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_2505 9cbcdb328a62924ee1cbef63bd85c1d8 87 Gene3D G3DSA:1.20.58.110 1 87 5.9E-31 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2505 9cbcdb328a62924ee1cbef63bd85c1d8 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.35 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2505 9cbcdb328a62924ee1cbef63bd85c1d8 87 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2505 9cbcdb328a62924ee1cbef63bd85c1d8 87 SUPERFAMILY SSF46992 3 86 2.35E-31 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2505 9cbcdb328a62924ee1cbef63bd85c1d8 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.0E-32 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_2505 9cbcdb328a62924ee1cbef63bd85c1d8 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 6.0E-36 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BD65_1916 a47f232b0b36654a0df3551d0c042844 425 Pfam PF00534 Glycosyl transferases group 1 248 398 8.0E-11 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BD65_1916 a47f232b0b36654a0df3551d0c042844 425 Gene3D G3DSA:3.40.50.2000 217 403 1.2E-65 T 14-10-2018 BD65_1916 a47f232b0b36654a0df3551d0c042844 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 1.2E-65 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 BD65_1916 a47f232b0b36654a0df3551d0c042844 425 Gene3D G3DSA:3.40.50.11720 41 209 3.5E-47 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 BD65_1916 a47f232b0b36654a0df3551d0c042844 425 SUPERFAMILY SSF53756 57 417 1.99E-15 T 14-10-2018 BD65_1212 9ed40334d0f936ffe977623f1af235ea 271 SUPERFAMILY SSF69572 7 261 5.49E-65 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BD65_1212 9ed40334d0f936ffe977623f1af235ea 271 Pfam PF00899 ThiF family 24 260 1.8E-39 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BD65_1212 9ed40334d0f936ffe977623f1af235ea 271 Gene3D G3DSA:3.40.50.720 1 270 7.8E-113 T 14-10-2018 BD65_2168 2d7216e83db55820dda65607ca257aa4 427 Pfam PF07969 Amidohydrolase family 46 405 2.0E-55 T 14-10-2018 IPR013108 Amidohydrolase 3 BD65_2168 2d7216e83db55820dda65607ca257aa4 427 SUPERFAMILY SSF51556 58 376 5.45E-107 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_2168 2d7216e83db55820dda65607ca257aa4 427 Gene3D G3DSA:2.30.40.10 16 411 5.4E-179 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_2168 2d7216e83db55820dda65607ca257aa4 427 Gene3D G3DSA:3.20.20.140 58 365 5.4E-179 T 14-10-2018 BD65_2168 2d7216e83db55820dda65607ca257aa4 427 SUPERFAMILY SSF51338 25 406 8.64E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BD65_1004 a67f60c431178ba69719f02db48ec010 62 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 2 49 2.0E-11 T 14-10-2018 IPR022576 Protein of unknown function DUF2633 BD65_1004 a67f60c431178ba69719f02db48ec010 62 Pfam PF11119 Protein of unknown function (DUF2633) 1 53 1.6E-24 T 14-10-2018 IPR022576 Protein of unknown function DUF2633 BD65_1434 4388a071e24e30796ea92a2850e40cc3 204 Gene3D G3DSA:1.10.3290.10 2 204 5.7E-43 T 14-10-2018 IPR036597 Fido-like domain superfamily BD65_1434 4388a071e24e30796ea92a2850e40cc3 204 SUPERFAMILY SSF140931 52 202 4.97E-34 T 14-10-2018 IPR036597 Fido-like domain superfamily BD65_1434 4388a071e24e30796ea92a2850e40cc3 204 Pfam PF02661 Fic/DOC family 60 158 1.1E-16 T 14-10-2018 IPR003812 Fido domain BD65_729 973f4dc7be5874d112b56e4643a0915f 63 Pfam PF14001 YdfZ protein 3 62 3.2E-27 T 14-10-2018 IPR017704 Putative selenium-binding protein YdfZ BD65_729 973f4dc7be5874d112b56e4643a0915f 63 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 2 62 1.3E-26 T 14-10-2018 IPR017704 Putative selenium-binding protein YdfZ BD65_779 6b13824b9145fa2077124084af741bd6 491 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_779 6b13824b9145fa2077124084af741bd6 491 SUPERFAMILY SSF48179 283 488 1.46E-68 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BD65_779 6b13824b9145fa2077124084af741bd6 491 SUPERFAMILY SSF51735 5 281 2.01E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_779 6b13824b9145fa2077124084af741bd6 491 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 2.6E-45 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 BD65_779 6b13824b9145fa2077124084af741bd6 491 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 463 5.8E-96 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 BD65_779 6b13824b9145fa2077124084af741bd6 491 Gene3D G3DSA:1.10.1040.10 282 491 1.1E-79 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BD65_779 6b13824b9145fa2077124084af741bd6 491 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 4.3E-22 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_779 6b13824b9145fa2077124084af741bd6 491 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 4.3E-22 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_779 6b13824b9145fa2077124084af741bd6 491 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 4.3E-22 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_779 6b13824b9145fa2077124084af741bd6 491 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 4.3E-22 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BD65_779 6b13824b9145fa2077124084af741bd6 491 Gene3D G3DSA:3.40.50.720 8 281 4.9E-107 T 14-10-2018 BD65_2770 26bfe6f9dc473c23422d1ceb3052230e 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 6.0E-210 T 14-10-2018 IPR010520 UPF0255 family BD65_2770 26bfe6f9dc473c23422d1ceb3052230e 415 SUPERFAMILY SSF53474 46 411 3.44E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_2770 26bfe6f9dc473c23422d1ceb3052230e 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 61.299 T 14-10-2018 IPR010520 UPF0255 family BD65_2770 26bfe6f9dc473c23422d1ceb3052230e 415 Gene3D G3DSA:3.40.50.1820 16 414 2.5E-108 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1037 f0b5f0c98911df64fe5864df24dbcc80 817 Pfam PF03995 Peptidase inhibitor family I36 27 82 7.2E-5 T 14-10-2018 BD65_1037 f0b5f0c98911df64fe5864df24dbcc80 817 SUPERFAMILY SSF49695 107 209 1.01E-13 T 14-10-2018 IPR011024 Gamma-crystallin-like BD65_1037 f0b5f0c98911df64fe5864df24dbcc80 817 SUPERFAMILY SSF49695 18 111 1.26E-12 T 14-10-2018 IPR011024 Gamma-crystallin-like BD65_1037 f0b5f0c98911df64fe5864df24dbcc80 817 Gene3D G3DSA:2.60.20.10 114 210 1.9E-19 T 14-10-2018 BD65_1037 f0b5f0c98911df64fe5864df24dbcc80 817 Gene3D G3DSA:2.60.20.10 9 113 9.2E-21 T 14-10-2018 BD65_693 60e34c881a882e4afdcdd7fc0fc6a6c7 219 Pfam PF02107 Flagellar L-ring protein 35 218 4.8E-61 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BD65_693 60e34c881a882e4afdcdd7fc0fc6a6c7 219 PRINTS PR01008 Flagellar L-ring protein signature 159 175 6.6E-36 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BD65_693 60e34c881a882e4afdcdd7fc0fc6a6c7 219 PRINTS PR01008 Flagellar L-ring protein signature 60 72 6.6E-36 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BD65_693 60e34c881a882e4afdcdd7fc0fc6a6c7 219 PRINTS PR01008 Flagellar L-ring protein signature 180 194 6.6E-36 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BD65_693 60e34c881a882e4afdcdd7fc0fc6a6c7 219 PRINTS PR01008 Flagellar L-ring protein signature 133 148 6.6E-36 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BD65_693 60e34c881a882e4afdcdd7fc0fc6a6c7 219 PRINTS PR01008 Flagellar L-ring protein signature 196 210 6.6E-36 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BD65_693 60e34c881a882e4afdcdd7fc0fc6a6c7 219 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 217 27.157 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BD65_3260 d5cb10a4df2f7cfb5835f59baf1eddde 620 Pfam PF03734 L,D-transpeptidase catalytic domain 381 547 1.2E-28 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BD65_3260 d5cb10a4df2f7cfb5835f59baf1eddde 620 Pfam PF01471 Putative peptidoglycan binding domain 317 352 5.8E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like BD65_3260 d5cb10a4df2f7cfb5835f59baf1eddde 620 SUPERFAMILY SSF141523 379 538 3.79E-18 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BD65_3260 d5cb10a4df2f7cfb5835f59baf1eddde 620 SUPERFAMILY SSF47090 316 360 2.2E-11 T 14-10-2018 IPR036365 PGBD-like superfamily BD65_3148 469e1a83a15909379aecb5b9c2a760f6 151 SUPERFAMILY SSF54593 15 140 5.1E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BD65_3148 469e1a83a15909379aecb5b9c2a760f6 151 Gene3D G3DSA:3.10.180.10 6 150 1.8E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BD65_3148 469e1a83a15909379aecb5b9c2a760f6 151 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 135 3.1E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BD65_785 acb0a63d6a28563a96b1154a30992e07 602 PIRSF PIRSF002741 7 593 1.5E-134 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BD65_785 acb0a63d6a28563a96b1154a30992e07 602 Gene3D G3DSA:3.10.105.10 310 568 2.4E-216 T 14-10-2018 BD65_785 acb0a63d6a28563a96b1154a30992e07 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 503 1.6E-69 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BD65_785 acb0a63d6a28563a96b1154a30992e07 602 Gene3D G3DSA:3.40.190.10 28 588 2.4E-216 T 14-10-2018 BD65_785 acb0a63d6a28563a96b1154a30992e07 602 SUPERFAMILY SSF53850 50 591 1.72E-108 T 14-10-2018 BD65_143 a13c46a180fedb5b34ec513b2898a05b 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 6.2E-127 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BD65_143 a13c46a180fedb5b34ec513b2898a05b 315 Gene3D G3DSA:3.40.50.2020 148 290 9.5E-137 T 14-10-2018 BD65_143 a13c46a180fedb5b34ec513b2898a05b 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 2.1E-30 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BD65_143 a13c46a180fedb5b34ec513b2898a05b 315 SMART SM01400 4 121 5.7E-76 T 14-10-2018 BD65_143 a13c46a180fedb5b34ec513b2898a05b 315 SUPERFAMILY SSF53271 69 306 2.5E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BD65_143 a13c46a180fedb5b34ec513b2898a05b 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.9E-49 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BD65_143 a13c46a180fedb5b34ec513b2898a05b 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BD65_143 a13c46a180fedb5b34ec513b2898a05b 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.844 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BD65_143 a13c46a180fedb5b34ec513b2898a05b 315 Gene3D G3DSA:3.40.50.2020 7 302 9.5E-137 T 14-10-2018 BD65_466 ad455dfa7a390dce738d36f3ada56d14 348 PIRSF PIRSF001361 1 348 1.3E-155 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BD65_466 ad455dfa7a390dce738d36f3ada56d14 348 Pfam PF00793 DAHP synthetase I family 39 337 2.8E-100 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BD65_466 ad455dfa7a390dce738d36f3ada56d14 348 SUPERFAMILY SSF51569 7 347 3.87E-130 T 14-10-2018 BD65_466 ad455dfa7a390dce738d36f3ada56d14 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 5.9E-167 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BD65_466 ad455dfa7a390dce738d36f3ada56d14 348 Gene3D G3DSA:3.20.20.70 1 348 1.4E-153 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_522 6aafb6cd274b382abd8f4e2c7ba88067 415 Pfam PF04403 Paraquat-inducible protein A 250 405 1.0E-45 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like BD65_522 6aafb6cd274b382abd8f4e2c7ba88067 415 Pfam PF04403 Paraquat-inducible protein A 53 204 2.2E-39 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like BD65_522 6aafb6cd274b382abd8f4e2c7ba88067 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 11 405 1.1E-170 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type BD65_642 42d4bd1102e34452049cb789b4537323 102 Gene3D G3DSA:1.10.10.60 7 88 1.2E-9 T 14-10-2018 BD65_642 42d4bd1102e34452049cb789b4537323 102 Pfam PF01527 Transposase 2 74 1.2E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_642 42d4bd1102e34452049cb789b4537323 102 SUPERFAMILY SSF46689 1 93 7.7E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1546 87eb874b12ed434a1eba9480e41c6e41 162 PIRSF PIRSF018472 1 162 1.6E-56 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type BD65_1546 87eb874b12ed434a1eba9480e41c6e41 162 Pfam PF04093 rod shape-determining protein MreD 7 154 4.2E-42 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BD65_1546 87eb874b12ed434a1eba9480e41c6e41 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 3.0E-41 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BD65_1384 59f2542562228c2b6ffc1c49af39565f 141 Pfam PF06853 Protein of unknown function (DUF1249) 22 135 7.6E-42 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 BD65_3012 79f15d534f340d5f9aa62e63db2855e1 184 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 179 28.969 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BD65_3012 79f15d534f340d5f9aa62e63db2855e1 184 PIRSF PIRSF001296 1 183 3.2E-70 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BD65_3012 79f15d534f340d5f9aa62e63db2855e1 184 Pfam PF02669 K+-transporting ATPase, c chain 2 177 1.4E-65 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BD65_3012 79f15d534f340d5f9aa62e63db2855e1 184 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 2 178 7.6E-71 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BD65_1257 17277f3432810bf3be49ebaeac3511bc 211 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 41 201 1.2E-21 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component BD65_1257 17277f3432810bf3be49ebaeac3511bc 211 SUPERFAMILY SSF159594 39 209 3.14E-41 T 14-10-2018 BD65_1257 17277f3432810bf3be49ebaeac3511bc 211 Gene3D G3DSA:3.40.50.10610 30 211 7.1E-51 T 14-10-2018 BD65_483 91d7fcc67c5407269ba2186daa88e6b6 335 Gene3D G3DSA:1.10.3470.10 8 332 3.3E-106 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_483 91d7fcc67c5407269ba2186daa88e6b6 335 Pfam PF01032 FecCD transport family 30 330 2.5E-84 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BD65_483 91d7fcc67c5407269ba2186daa88e6b6 335 SUPERFAMILY SSF81345 12 330 1.57E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_483 91d7fcc67c5407269ba2186daa88e6b6 335 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 7 333 32.766 T 14-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 BD65_1398 111caf65bd1c4d8a9fe6767b5c9ba6a8 119 SMART SM00905 4 114 1.9E-46 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BD65_1398 111caf65bd1c4d8a9fe6767b5c9ba6a8 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.5E-26 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BD65_1398 111caf65bd1c4d8a9fe6767b5c9ba6a8 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 3.2E-39 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BD65_1398 111caf65bd1c4d8a9fe6767b5c9ba6a8 119 Gene3D G3DSA:3.30.1130.10 1 119 7.1E-43 T 14-10-2018 BD65_1398 111caf65bd1c4d8a9fe6767b5c9ba6a8 119 SUPERFAMILY SSF55620 1 115 1.56E-36 T 14-10-2018 BD65_1398 111caf65bd1c4d8a9fe6767b5c9ba6a8 119 Pfam PF02152 Dihydroneopterin aldolase 4 112 1.6E-30 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BD65_2490 accaf9a6a6e61da180b9889ad99fbf49 159 PIRSF PIRSF003174 1 159 2.8E-67 T 14-10-2018 IPR010292 Uncharacterised protein family CreA BD65_2490 accaf9a6a6e61da180b9889ad99fbf49 159 Pfam PF05981 CreA protein 24 155 4.7E-58 T 14-10-2018 IPR010292 Uncharacterised protein family CreA BD65_1860 91076d22ff5e064bb0f24858a46ffe36 814 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 200 542 1.3E-92 T 14-10-2018 IPR010090 Phage tail tape measure protein BD65_1860 91076d22ff5e064bb0f24858a46ffe36 814 Pfam PF10145 Phage-related minor tail protein 240 440 2.6E-39 T 14-10-2018 IPR010090 Phage tail tape measure protein BD65_990 b6c3e74370a13829ae05ec0c433d67e7 354 Pfam PF01594 AI-2E family transporter 19 345 1.5E-79 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like BD65_808 9e67d7dbc408534e0f83f1451d8e07f6 105 SMART SM01321 1 77 1.5E-8 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_808 9e67d7dbc408534e0f83f1451d8e07f6 105 Gene3D G3DSA:3.30.70.1290 1 84 1.5E-23 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_808 9e67d7dbc408534e0f83f1451d8e07f6 105 SUPERFAMILY SSF143422 1 78 1.96E-25 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_808 9e67d7dbc408534e0f83f1451d8e07f6 105 Pfam PF01797 Transposase IS200 like 1 77 1.4E-24 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_2669 3ac7fa150e1c8b62d39910d9c33c47e6 135 Pfam PF03519 Invasion protein B family 17 94 2.0E-17 T 14-10-2018 IPR003065 Surface presentation of antigens protein SpaK BD65_2669 3ac7fa150e1c8b62d39910d9c33c47e6 135 SUPERFAMILY SSF69635 1 133 1.26E-35 T 14-10-2018 BD65_2669 3ac7fa150e1c8b62d39910d9c33c47e6 135 PRINTS PR01305 Invasion protein B family signature 98 111 2.5E-16 T 14-10-2018 IPR003065 Surface presentation of antigens protein SpaK BD65_2669 3ac7fa150e1c8b62d39910d9c33c47e6 135 PRINTS PR01305 Invasion protein B family signature 30 40 2.5E-16 T 14-10-2018 IPR003065 Surface presentation of antigens protein SpaK BD65_2669 3ac7fa150e1c8b62d39910d9c33c47e6 135 PRINTS PR01305 Invasion protein B family signature 40 54 2.5E-16 T 14-10-2018 IPR003065 Surface presentation of antigens protein SpaK BD65_2669 3ac7fa150e1c8b62d39910d9c33c47e6 135 PRINTS PR01305 Invasion protein B family signature 17 30 2.5E-16 T 14-10-2018 IPR003065 Surface presentation of antigens protein SpaK BD65_2669 3ac7fa150e1c8b62d39910d9c33c47e6 135 PRINTS PR01305 Invasion protein B family signature 111 123 2.5E-16 T 14-10-2018 IPR003065 Surface presentation of antigens protein SpaK BD65_2669 3ac7fa150e1c8b62d39910d9c33c47e6 135 Gene3D G3DSA:3.30.1460.10 1 133 9.1E-31 T 14-10-2018 BD65_1635 88a40f5377ad0792a8bfa9c042a79d33 217 Pfam PF07356 Protein of unknown function (DUF1481) 28 213 2.4E-67 T 14-10-2018 IPR010858 Protein of unknown function DUF1481 BD65_1954 5ce0fc0dadc8d930a218c2aa0af9ae47 178 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 172 17.137 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 BD65_1954 5ce0fc0dadc8d930a218c2aa0af9ae47 178 Pfam PF04220 Der GTPase activator (YihI) 14 169 2.0E-54 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 BD65_2701 2c584cb3ba687036b6c61898f5fad9b5 160 SUPERFAMILY SSF46894 36 111 1.56E-7 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BD65_2701 2c584cb3ba687036b6c61898f5fad9b5 160 Gene3D G3DSA:1.10.10.10 13 133 7.7E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2701 2c584cb3ba687036b6c61898f5fad9b5 160 SMART SM00862 37 111 0.0014 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BD65_1444 9f129d93c8d5b0aeda2ec09d138b9844 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 126 154 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BD65_1444 9f129d93c8d5b0aeda2ec09d138b9844 238 Gene3D G3DSA:3.40.50.720 1 237 3.8E-49 T 14-10-2018 BD65_1444 9f129d93c8d5b0aeda2ec09d138b9844 238 SUPERFAMILY SSF51735 2 235 2.26E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_1444 9f129d93c8d5b0aeda2ec09d138b9844 238 Pfam PF00106 short chain dehydrogenase 2 179 1.5E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_1444 9f129d93c8d5b0aeda2ec09d138b9844 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_1444 9f129d93c8d5b0aeda2ec09d138b9844 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 177 8.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_1444 9f129d93c8d5b0aeda2ec09d138b9844 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 8.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BD65_3132 f625db80ce57e4f610bb7e76843fde57 250 Gene3D G3DSA:3.40.50.720 4 250 3.9E-88 T 14-10-2018 BD65_3132 f625db80ce57e4f610bb7e76843fde57 250 SUPERFAMILY SSF69572 3 248 3.53E-85 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BD65_3132 f625db80ce57e4f610bb7e76843fde57 250 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 3.4E-125 T 14-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 BD65_3132 f625db80ce57e4f610bb7e76843fde57 250 Pfam PF00899 ThiF family 12 244 4.6E-63 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BD65_2946 785119a14cfde41f900f5e3301733328 446 Pfam PF11329 Protein of unknown function (DUF3131) 42 406 4.8E-116 T 14-10-2018 IPR021478 Protein of unknown function DUF3131 BD65_2946 785119a14cfde41f900f5e3301733328 446 Gene3D G3DSA:1.50.10.140 26 214 1.4E-7 T 14-10-2018 BD65_1355 595022863aa0ce91bee3781f1ca5fe93 140 Pfam PF01478 Type IV leader peptidase family 14 108 1.2E-8 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BD65_1355 595022863aa0ce91bee3781f1ca5fe93 140 Gene3D G3DSA:1.20.120.1220 3 115 5.1E-7 T 14-10-2018 BD65_427 2979dc3e03ca46ca0a5b1cd0cfb0a044 370 SUPERFAMILY SSF53067 6 340 4.75E-28 T 14-10-2018 BD65_427 2979dc3e03ca46ca0a5b1cd0cfb0a044 370 Gene3D G3DSA:3.30.420.40 145 327 1.4E-132 T 14-10-2018 BD65_427 2979dc3e03ca46ca0a5b1cd0cfb0a044 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.753 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 BD65_427 2979dc3e03ca46ca0a5b1cd0cfb0a044 370 Gene3D G3DSA:3.30.420.40 11 362 1.4E-132 T 14-10-2018 BD65_427 2979dc3e03ca46ca0a5b1cd0cfb0a044 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 366 4.0E-167 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 BD65_2640 71870984e6140d9982e534f618f092cc 319 Gene3D G3DSA:3.10.350.10 63 126 1.3E-10 T 14-10-2018 IPR036779 LysM domain superfamily BD65_2640 71870984e6140d9982e534f618f092cc 319 SMART SM00257 70 114 2.7E-10 T 14-10-2018 IPR018392 LysM domain BD65_2640 71870984e6140d9982e534f618f092cc 319 SUPERFAMILY SSF51261 70 316 2.77E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif BD65_2640 71870984e6140d9982e534f618f092cc 319 Pfam PF01551 Peptidase family M23 219 312 1.0E-31 T 14-10-2018 IPR016047 Peptidase M23 BD65_2640 71870984e6140d9982e534f618f092cc 319 Gene3D G3DSA:2.70.70.10 184 319 3.1E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif BD65_2640 71870984e6140d9982e534f618f092cc 319 Pfam PF01476 LysM domain 71 112 1.6E-9 T 14-10-2018 IPR018392 LysM domain BD65_2196 b449ab50fb3d4192788a2ea3f2975b52 272 Gene3D G3DSA:1.10.287.460 27 143 9.3E-31 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BD65_2196 b449ab50fb3d4192788a2ea3f2975b52 272 Gene3D G3DSA:3.10.50.40 144 258 4.0E-42 T 14-10-2018 BD65_2196 b449ab50fb3d4192788a2ea3f2975b52 272 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 34 153 2.4E-37 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BD65_2196 b449ab50fb3d4192788a2ea3f2975b52 272 SUPERFAMILY SSF54534 43 250 2.16E-63 T 14-10-2018 BD65_2196 b449ab50fb3d4192788a2ea3f2975b52 272 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 247 1.4E-29 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BD65_2766 28b0e5965ce94ad1e918d54d2ff67ea4 309 SUPERFAMILY SSF51695 26 305 1.57E-42 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_2766 28b0e5965ce94ad1e918d54d2ff67ea4 309 Gene3D G3DSA:3.20.20.190 24 309 2.4E-37 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_2766 28b0e5965ce94ad1e918d54d2ff67ea4 309 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 299 5.7E-22 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BD65_765 729696cf0497338a7817437163b713ac 138 Pfam PF01797 Transposase IS200 like 16 134 8.5E-40 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_765 729696cf0497338a7817437163b713ac 138 Gene3D G3DSA:3.30.70.1290 5 137 1.0E-40 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_765 729696cf0497338a7817437163b713ac 138 SMART SM01321 14 134 1.6E-41 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_765 729696cf0497338a7817437163b713ac 138 SUPERFAMILY SSF143422 6 135 5.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_1724 fca70c24504e7f8bab0f41abdce64ee6 90 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 8.6E-27 T 14-10-2018 IPR009525 Protein of unknown function DUF1145 BD65_2542 32d328dd3c259e0514bdca587cead793 599 Gene3D G3DSA:3.40.50.12780 3 305 8.6E-53 T 14-10-2018 BD65_2542 32d328dd3c259e0514bdca587cead793 599 SUPERFAMILY SSF56801 9 597 3.53E-110 T 14-10-2018 BD65_2542 32d328dd3c259e0514bdca587cead793 599 Gene3D G3DSA:3.40.50.12780 320 459 6.7E-35 T 14-10-2018 BD65_2542 32d328dd3c259e0514bdca587cead793 599 Pfam PF00501 AMP-binding enzyme 15 468 1.7E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BD65_2542 32d328dd3c259e0514bdca587cead793 599 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 14-10-2018 IPR020845 AMP-binding, conserved site BD65_1955 5ac75e6eba999576524c4d9dfe83dfee 216 Pfam PF01926 50S ribosome-binding GTPase 30 148 2.4E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BD65_1955 5ac75e6eba999576524c4d9dfe83dfee 216 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 9.1E-74 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BD65_1955 5ac75e6eba999576524c4d9dfe83dfee 216 SUPERFAMILY SSF52540 19 201 2.59E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1955 5ac75e6eba999576524c4d9dfe83dfee 216 Gene3D G3DSA:3.40.50.300 3 206 1.1E-58 T 14-10-2018 BD65_1955 5ac75e6eba999576524c4d9dfe83dfee 216 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.716 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BD65_714 760dbba14dfad2575801f46b54391020 165 Gene3D G3DSA:2.40.50.180 37 146 1.2E-39 T 14-10-2018 BD65_714 760dbba14dfad2575801f46b54391020 165 Pfam PF01584 CheW-like domain 18 154 8.5E-37 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BD65_714 760dbba14dfad2575801f46b54391020 165 SUPERFAMILY SSF50341 17 158 3.4E-39 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BD65_714 760dbba14dfad2575801f46b54391020 165 SMART SM00260 14 151 4.9E-42 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BD65_714 760dbba14dfad2575801f46b54391020 165 Gene3D G3DSA:2.30.30.40 20 145 1.2E-39 T 14-10-2018 BD65_727 79fb48938e1b935f0b9ce7cf5118bb81 168 Pfam PF10777 Inner membrane protein YlaC 1 153 8.2E-70 T 14-10-2018 IPR019713 Inner membrane protein YlaC BD65_1379 819384bcb35d0c48a994a65999ddb328 194 Pfam PF02525 Flavodoxin-like fold 3 188 8.3E-38 T 14-10-2018 IPR003680 Flavodoxin-like fold BD65_1379 819384bcb35d0c48a994a65999ddb328 194 SUPERFAMILY SSF52218 1 189 2.99E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_1379 819384bcb35d0c48a994a65999ddb328 194 Gene3D G3DSA:3.40.50.360 1 192 1.1E-64 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_2646 6687c41d969bd040c2ff0e242e5a152e 400 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 313 389 2.4E-11 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BD65_2646 6687c41d969bd040c2ff0e242e5a152e 400 Pfam PF01943 Polysaccharide biosynthesis protein 2 258 6.4E-18 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BD65_1588 b84ec8a852cee12ce7dad92eb22dacc0 428 Hamap MF_01301 Maltoporin [lamB]. 3 428 43.352 T 14-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 BD65_1588 b84ec8a852cee12ce7dad92eb22dacc0 428 SUPERFAMILY SSF56935 25 428 1.4E-147 T 14-10-2018 BD65_1588 b84ec8a852cee12ce7dad92eb22dacc0 428 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 423 0.0 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 BD65_1588 b84ec8a852cee12ce7dad92eb22dacc0 428 Pfam PF02264 LamB porin 27 428 1.4E-145 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 BD65_1588 b84ec8a852cee12ce7dad92eb22dacc0 428 Gene3D G3DSA:2.40.170.10 25 428 9.3E-171 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 SUPERFAMILY SSF56931 40 291 2.09E-92 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 4.1E-81 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 239 256 4.1E-81 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 261 281 4.1E-81 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 4.1E-81 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 4.1E-81 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 4.1E-81 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 4.1E-81 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 206 224 4.1E-81 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 Gene3D G3DSA:2.40.230.10 33 292 1.6E-104 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_1741 19c1ade9d34fb5d50a94e119df0261e4 292 Pfam PF02253 Phospholipase A1 43 288 5.3E-96 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BD65_617 e2a0abc80511782fc98d0751a6ac7877 503 Pfam PF13520 Amino acid permease 9 443 3.9E-63 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_617 e2a0abc80511782fc98d0751a6ac7877 503 PIRSF PIRSF006060 2 501 8.7E-41 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_617 e2a0abc80511782fc98d0751a6ac7877 503 Gene3D G3DSA:1.20.1740.10 3 491 3.0E-49 T 14-10-2018 BD65_593 866d803e9efc90c6e045d68ee697e15a 500 Gene3D G3DSA:1.20.1740.10 5 486 3.7E-53 T 14-10-2018 BD65_593 866d803e9efc90c6e045d68ee697e15a 500 Pfam PF13520 Amino acid permease 9 440 3.4E-66 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_593 866d803e9efc90c6e045d68ee697e15a 500 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 4 500 2.3E-152 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 BD65_593 866d803e9efc90c6e045d68ee697e15a 500 PIRSF PIRSF006060 1 500 2.5E-47 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_2200 c13765ecd59def29613059d29596f00b 95 Pfam PF04077 DsrH like protein 7 91 5.5E-27 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 BD65_2200 c13765ecd59def29613059d29596f00b 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 27.09 T 14-10-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 BD65_2200 c13765ecd59def29613059d29596f00b 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 1.7E-28 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 BD65_2200 c13765ecd59def29613059d29596f00b 95 Gene3D G3DSA:3.40.1260.10 1 95 3.7E-28 T 14-10-2018 IPR027396 DsrEFH-like BD65_2200 c13765ecd59def29613059d29596f00b 95 SUPERFAMILY SSF75169 1 95 2.94E-27 T 14-10-2018 IPR027396 DsrEFH-like BD65_1156 0445497ac3ad79c780ab8f74e89e34b7 113 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 31 106 2.3E-7 T 14-10-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein BD65_1156 0445497ac3ad79c780ab8f74e89e34b7 113 PIRSF PIRSF034456 8 113 1.7E-52 T 14-10-2018 IPR017028 Uncharacterised conserved protein UCP034456 BD65_2079 b244acafe7e76490e255c0b2fb5e63d2 546 Pfam PF11658 Cellulose biosynthesis protein BcsG 23 541 8.5E-233 T 14-10-2018 IPR017744 Cellulose biosynthesis protein BcsG BD65_2079 b244acafe7e76490e255c0b2fb5e63d2 546 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 21 544 6.7E-227 T 14-10-2018 IPR017744 Cellulose biosynthesis protein BcsG BD65_2775 619791bd06967d69591ff5cdcc1d3c73 84 SUPERFAMILY SSF90123 11 74 6.93E-5 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_1878 f2a804ea374f91e513e4535f29eacbde 255 Pfam PF05944 Phage small terminase subunit 35 164 7.7E-45 T 14-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 BD65_1700 bde1f1ee824db06eac015802db7ef345 357 Gene3D G3DSA:2.40.50.140 285 340 9.8E-27 T 14-10-2018 BD65_1700 bde1f1ee824db06eac015802db7ef345 357 Gene3D G3DSA:2.40.50.940 223 349 9.8E-27 T 14-10-2018 BD65_1700 bde1f1ee824db06eac015802db7ef345 357 Gene3D G3DSA:3.40.50.300 3 222 3.8E-63 T 14-10-2018 BD65_1700 bde1f1ee824db06eac015802db7ef345 357 Pfam PF00005 ABC transporter 21 162 4.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1700 bde1f1ee824db06eac015802db7ef345 357 SMART SM00382 29 212 1.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1700 bde1f1ee824db06eac015802db7ef345 357 Pfam PF08402 TOBE domain 278 348 6.0E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BD65_1700 bde1f1ee824db06eac015802db7ef345 357 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1700 bde1f1ee824db06eac015802db7ef345 357 SUPERFAMILY SSF52540 4 242 6.47E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1700 bde1f1ee824db06eac015802db7ef345 357 SUPERFAMILY SSF50331 237 356 4.62E-24 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BD65_304 a2edf037562ea2e2b87c82c3205e2d71 86 Gene3D G3DSA:3.30.1660.10 21 86 7.0E-19 T 14-10-2018 IPR025543 Dodecin-like BD65_304 a2edf037562ea2e2b87c82c3205e2d71 86 SUPERFAMILY SSF159871 3 86 6.28E-24 T 14-10-2018 IPR036275 YdgH-like superfamily BD65_304 a2edf037562ea2e2b87c82c3205e2d71 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 1.3E-19 T 14-10-2018 IPR010854 Domain of unknown function DUF1471 BD65_969 dc01f1e61eab22840fa94be278b846f5 138 Gene3D G3DSA:1.10.1130.10 51 118 9.7E-30 T 14-10-2018 BD65_969 dc01f1e61eab22840fa94be278b846f5 138 SUPERFAMILY SSF48695 37 133 1.02E-41 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BD65_969 dc01f1e61eab22840fa94be278b846f5 138 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 24 131 2.4E-46 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB BD65_969 dc01f1e61eab22840fa94be278b846f5 138 PIRSF PIRSF006105 1 138 1.2E-53 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB BD65_2603 1469cb1197167d328b857cd76c4e0383 235 Gene3D G3DSA:2.40.50.580 1 80 3.9E-28 T 14-10-2018 BD65_2603 1469cb1197167d328b857cd76c4e0383 235 Pfam PF03749 Sugar fermentation stimulation protein 13 226 6.7E-75 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein BD65_2603 1469cb1197167d328b857cd76c4e0383 235 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 228 9.7E-80 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein BD65_2603 1469cb1197167d328b857cd76c4e0383 235 Gene3D G3DSA:3.40.1350.60 81 233 1.8E-55 T 14-10-2018 BD65_2603 1469cb1197167d328b857cd76c4e0383 235 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 54.005 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein BD65_1725 780b815458422ce1e2998569b694bf13 126 Gene3D G3DSA:2.40.50.660 36 125 2.0E-26 T 14-10-2018 BD65_1725 780b815458422ce1e2998569b694bf13 126 Pfam PF10694 Protein of unknown function (DUF2500) 5 115 1.6E-33 T 14-10-2018 IPR019635 Protein of unknown function DUF2500 BD65_2247 e564a2c4a113f95a035857131f6d5961 180 Gene3D G3DSA:2.160.10.10 1 180 1.7E-56 T 14-10-2018 BD65_2247 e564a2c4a113f95a035857131f6d5961 180 SUPERFAMILY SSF51161 5 175 1.15E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BD65_2247 e564a2c4a113f95a035857131f6d5961 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 47 1.7E-5 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_2247 e564a2c4a113f95a035857131f6d5961 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 131 2.7E-8 T 14-10-2018 IPR001451 Hexapeptide repeat BD65_2618 4f307694be82b95d35e9c37dd00b70ec 280 Gene3D G3DSA:1.10.287.1080 146 279 3.6E-47 T 14-10-2018 BD65_2618 4f307694be82b95d35e9c37dd00b70ec 280 SUPERFAMILY SSF101386 153 253 4.49E-23 T 14-10-2018 BD65_2618 4f307694be82b95d35e9c37dd00b70ec 280 SUPERFAMILY SSF101386 14 112 4.49E-24 T 14-10-2018 BD65_2618 4f307694be82b95d35e9c37dd00b70ec 280 Gene3D G3DSA:1.10.287.1080 12 142 4.9E-44 T 14-10-2018 BD65_2618 4f307694be82b95d35e9c37dd00b70ec 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 38 111 1.5E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BD65_2618 4f307694be82b95d35e9c37dd00b70ec 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 184 246 1.5E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BD65_2618 4f307694be82b95d35e9c37dd00b70ec 280 TIGRFAM TIGR00444 mazG: MazG family protein 21 274 1.2E-106 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG BD65_2197 1d6e5e979a545b086ec1240001832fcd 240 Pfam PF08348 YheO-like PAS domain 29 137 1.1E-35 T 14-10-2018 IPR013559 YheO-like BD65_2197 1d6e5e979a545b086ec1240001832fcd 240 Pfam PF13309 HTH domain 171 228 3.2E-19 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain BD65_2197 1d6e5e979a545b086ec1240001832fcd 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 5.0E-63 T 14-10-2018 IPR013559 YheO-like BD65_2725 3d0e0948f5ee50a8d101c3a36da21821 182 SUPERFAMILY SSF50346 106 182 2.35E-19 T 14-10-2018 IPR011033 PRC-barrel-like superfamily BD65_2725 3d0e0948f5ee50a8d101c3a36da21821 182 Pfam PF05239 PRC-barrel domain 104 177 2.7E-9 T 14-10-2018 IPR027275 PRC-barrel domain BD65_2725 3d0e0948f5ee50a8d101c3a36da21821 182 Pfam PF01782 RimM N-terminal domain 16 96 9.6E-25 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 BD65_2725 3d0e0948f5ee50a8d101c3a36da21821 182 Gene3D G3DSA:2.30.30.240 101 182 1.5E-30 T 14-10-2018 BD65_2725 3d0e0948f5ee50a8d101c3a36da21821 182 Gene3D G3DSA:2.40.30.60 6 100 2.8E-33 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 BD65_2725 3d0e0948f5ee50a8d101c3a36da21821 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.673 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BD65_2725 3d0e0948f5ee50a8d101c3a36da21821 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.4E-58 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BD65_2725 3d0e0948f5ee50a8d101c3a36da21821 182 SUPERFAMILY SSF50447 13 100 5.65E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BD65_2778 3944fb66abb865bb9c02fbdebdcfc26b 359 Pfam PF01497 Periplasmic binding protein 73 299 9.4E-30 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain BD65_2778 3944fb66abb865bb9c02fbdebdcfc26b 359 Gene3D G3DSA:3.40.50.1980 8 355 3.9E-100 T 14-10-2018 BD65_2778 3944fb66abb865bb9c02fbdebdcfc26b 359 SUPERFAMILY SSF53807 10 325 5.89E-54 T 14-10-2018 BD65_149 ee45e53821cf7e2b434ed89f7595756c 133 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 126 5.1E-45 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB BD65_149 ee45e53821cf7e2b434ed89f7595756c 133 PIRSF PIRSF005610 1 125 1.2E-28 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB BD65_2882 243c6600754e83aba5125e6451973d9b 57 Pfam PF01527 Transposase 3 51 2.1E-5 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_2882 243c6600754e83aba5125e6451973d9b 57 SUPERFAMILY SSF46689 2 52 6.27E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2374 4a07b6e4a5fcb3c9229d446dcd5a075b 249 Gene3D G3DSA:3.60.15.10 1 249 4.3E-70 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_2374 4a07b6e4a5fcb3c9229d446dcd5a075b 249 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 247 1.5E-117 T 14-10-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BD65_2374 4a07b6e4a5fcb3c9229d446dcd5a075b 249 SUPERFAMILY SSF56281 1 249 4.87E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_2374 4a07b6e4a5fcb3c9229d446dcd5a075b 249 Pfam PF12706 Beta-lactamase superfamily domain 65 220 2.7E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_544 8e02ad22f7837ed7be77da8a014486a2 76 SUPERFAMILY SSF46575 1 76 2.35E-35 T 14-10-2018 BD65_544 8e02ad22f7837ed7be77da8a014486a2 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 4 76 6.0E-27 T 14-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_544 8e02ad22f7837ed7be77da8a014486a2 76 Gene3D G3DSA:1.20.58.250 1 76 7.6E-39 T 14-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_544 8e02ad22f7837ed7be77da8a014486a2 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 5.4E-39 T 14-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BD65_2516 296484a56db4ebb878e473c0b44d7904 266 Pfam PF06738 Putative threonine/serine exporter 21 260 4.4E-66 T 14-10-2018 IPR010619 Putative threonine/serine exporter BD65_2367 a4c7ced0d2c864624daa61a6e68072c2 173 PIRSF PIRSF025550 1 173 9.2E-83 T 14-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT BD65_2367 a4c7ced0d2c864624daa61a6e68072c2 173 Pfam PF02036 SCP-2 sterol transfer family 44 133 3.8E-20 T 14-10-2018 IPR003033 SCP2 sterol-binding domain BD65_2367 a4c7ced0d2c864624daa61a6e68072c2 173 Gene3D G3DSA:3.30.1050.10 53 139 3.0E-9 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BD65_2367 a4c7ced0d2c864624daa61a6e68072c2 173 SUPERFAMILY SSF55718 42 137 1.12E-23 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BD65_2157 0412869cd871f65f727aa512fb180c5f 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.47 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BD65_2157 0412869cd871f65f727aa512fb180c5f 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BD65_2157 0412869cd871f65f727aa512fb180c5f 173 SUPERFAMILY SSF52540 4 170 1.05E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2157 0412869cd871f65f727aa512fb180c5f 173 PRINTS PR01100 Shikimate kinase family signature 59 67 4.3E-29 T 14-10-2018 BD65_2157 0412869cd871f65f727aa512fb180c5f 173 PRINTS PR01100 Shikimate kinase family signature 31 44 4.3E-29 T 14-10-2018 BD65_2157 0412869cd871f65f727aa512fb180c5f 173 PRINTS PR01100 Shikimate kinase family signature 98 115 4.3E-29 T 14-10-2018 BD65_2157 0412869cd871f65f727aa512fb180c5f 173 PRINTS PR01100 Shikimate kinase family signature 7 22 4.3E-29 T 14-10-2018 BD65_2157 0412869cd871f65f727aa512fb180c5f 173 PRINTS PR01100 Shikimate kinase family signature 77 86 4.3E-29 T 14-10-2018 BD65_2157 0412869cd871f65f727aa512fb180c5f 173 Pfam PF01202 Shikimate kinase 13 170 1.9E-56 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BD65_2157 0412869cd871f65f727aa512fb180c5f 173 Gene3D G3DSA:3.40.50.300 1 173 2.2E-58 T 14-10-2018 BD65_2086 81a74b750d0d595461dc5f5f62cfca30 376 SUPERFAMILY SSF48208 8 358 1.97E-100 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BD65_2086 81a74b750d0d595461dc5f5f62cfca30 376 Gene3D G3DSA:1.50.10.10 23 368 2.1E-136 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BD65_2086 81a74b750d0d595461dc5f5f62cfca30 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 53 66 4.3E-18 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BD65_2086 81a74b750d0d595461dc5f5f62cfca30 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 4.3E-18 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BD65_2086 81a74b750d0d595461dc5f5f62cfca30 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 339 353 4.3E-18 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BD65_2086 81a74b750d0d595461dc5f5f62cfca30 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 242 251 4.3E-18 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BD65_2086 81a74b750d0d595461dc5f5f62cfca30 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 180 197 4.3E-18 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BD65_2086 81a74b750d0d595461dc5f5f62cfca30 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 217 228 4.3E-18 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BD65_2086 81a74b750d0d595461dc5f5f62cfca30 376 Pfam PF01270 Glycosyl hydrolases family 8 9 353 1.2E-90 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BD65_2962 7ed6d5a6486e6108601bda3e17171236 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.956 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 BD65_2962 7ed6d5a6486e6108601bda3e17171236 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 2.1E-30 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 BD65_2962 7ed6d5a6486e6108601bda3e17171236 87 Gene3D G3DSA:3.30.70.260 1 87 7.1E-35 T 14-10-2018 BD65_2962 7ed6d5a6486e6108601bda3e17171236 87 SUPERFAMILY SSF117991 1 87 7.85E-32 T 14-10-2018 IPR027471 YbeD-like domain superfamily BD65_263 6361c3f0a56b033b7aedce2ed3a17b9b 98 Gene3D G3DSA:3.30.70.1060 1 98 7.8E-36 T 14-10-2018 BD65_263 6361c3f0a56b033b7aedce2ed3a17b9b 98 SUPERFAMILY SSF54909 1 98 3.4E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BD65_263 6361c3f0a56b033b7aedce2ed3a17b9b 98 Pfam PF03795 YCII-related domain 1 95 2.0E-25 T 14-10-2018 IPR005545 YCII-related BD65_985 f45c574f554eca52c4747187a880851b 237 Pfam PF01259 SAICAR synthetase 7 230 1.0E-57 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_985 f45c574f554eca52c4747187a880851b 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_985 f45c574f554eca52c4747187a880851b 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 207 5.9E-77 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 BD65_985 f45c574f554eca52c4747187a880851b 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_985 f45c574f554eca52c4747187a880851b 237 SUPERFAMILY SSF56104 2 232 4.9E-75 T 14-10-2018 BD65_985 f45c574f554eca52c4747187a880851b 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.318 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BD65_985 f45c574f554eca52c4747187a880851b 237 Gene3D G3DSA:3.30.200.20 7 231 7.9E-90 T 14-10-2018 BD65_985 f45c574f554eca52c4747187a880851b 237 Gene3D G3DSA:3.30.470.20 85 220 7.9E-90 T 14-10-2018 BD65_3051 52ea29d770273ed5ba03ebdd7c3de81e 241 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 229 1.5E-63 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 BD65_3051 52ea29d770273ed5ba03ebdd7c3de81e 241 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 2.2E-54 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 BD65_558 f24f2bcb7832554ed773be8cb4240a46 191 Pfam PF00293 NUDIX domain 28 110 5.4E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_558 f24f2bcb7832554ed773be8cb4240a46 191 Gene3D G3DSA:3.90.79.10 9 187 4.9E-46 T 14-10-2018 BD65_558 f24f2bcb7832554ed773be8cb4240a46 191 SUPERFAMILY SSF55811 8 179 1.03E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_558 f24f2bcb7832554ed773be8cb4240a46 191 ProSitePatterns PS01293 Nudix CoA signature. 45 65 - T 14-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 BD65_117 fcbfc62eca00cb20edac48d55ec7fcb9 55 Pfam PF10617 Protein of unknown function (DUF2474) 16 54 2.6E-20 T 14-10-2018 IPR018895 Protein of unknown function DUF2474 BD65_2634 4b4a74dfc962f2e1fbebd1cccc394485 107 Gene3D G3DSA:1.20.5.400 21 63 9.0E-14 T 14-10-2018 BD65_2634 4b4a74dfc962f2e1fbebd1cccc394485 107 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.268 T 14-10-2018 IPR023081 Cell division protein FtsB BD65_2634 4b4a74dfc962f2e1fbebd1cccc394485 107 Pfam PF04977 Septum formation initiator 11 89 3.5E-28 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC BD65_9 491ea218aa86f59d6d5d3a8fc8c717ae 186 Gene3D G3DSA:3.40.50.10610 13 182 1.5E-5 T 14-10-2018 BD65_9 491ea218aa86f59d6d5d3a8fc8c717ae 186 SUPERFAMILY SSF159594 23 184 3.4E-27 T 14-10-2018 BD65_9 491ea218aa86f59d6d5d3a8fc8c717ae 186 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 179 1.1E-39 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component BD65_953 ab5ee20562bf00f57fbfa195503b9a72 340 Gene3D G3DSA:3.40.190.10 34 303 5.3E-120 T 14-10-2018 BD65_953 ab5ee20562bf00f57fbfa195503b9a72 340 Gene3D G3DSA:3.40.190.10 122 333 5.3E-120 T 14-10-2018 BD65_953 ab5ee20562bf00f57fbfa195503b9a72 340 Pfam PF13531 Bacterial extracellular solute-binding protein 41 287 2.2E-42 T 14-10-2018 BD65_953 ab5ee20562bf00f57fbfa195503b9a72 340 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 20 334 2.8E-156 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 BD65_953 ab5ee20562bf00f57fbfa195503b9a72 340 SUPERFAMILY SSF53850 27 334 9.37E-79 T 14-10-2018 BD65_3024 33e285e4aaed8fc18e34d27b8f0c1243 339 Pfam PF06166 Protein of unknown function (DUF979) 6 338 5.2E-128 T 14-10-2018 IPR009323 Protein of unknown function DUF979 BD65_2918 becd52a7d785a8436d99e7197a507b99 70 Pfam PF13275 S4 domain 8 68 3.0E-22 T 14-10-2018 BD65_2918 becd52a7d785a8436d99e7197a507b99 70 SUPERFAMILY SSF55174 6 69 1.7E-18 T 14-10-2018 BD65_2918 becd52a7d785a8436d99e7197a507b99 70 Gene3D G3DSA:3.10.290.10 1 70 1.4E-25 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BD65_2397 53ae79adbc26a8467bdf126eead8f67c 549 TIGRFAM TIGR03238 dnd_assoc_3: DNA phosphorothioation-dependent restriction protein DptF 32 544 5.7E-134 T 14-10-2018 IPR017647 DNA phosphorothioation-dependent restriction protein DptF BD65_2901 c9925524d441ff548663c2533f7d4884 810 Pfam PF02687 FtsX-like permease family 714 799 7.1E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BD65_2479 1c47811524469babe30d9541af4f8300 232 Pfam PF10144 Bacterial virulence factor haemolysin 1 162 4.4E-68 T 14-10-2018 IPR019305 Uncharacterised protein family Smp BD65_400 ae673d80f6ac3c318264cd405808747a 151 Pfam PF08808 RES domain 2 146 2.4E-27 T 14-10-2018 IPR014914 RES domain BD65_400 ae673d80f6ac3c318264cd405808747a 151 SMART SM00953 14 139 1.5E-29 T 14-10-2018 IPR014914 RES domain BD65_1824 6fc1d553f257c23cf0fddba3f6397afa 257 Gene3D G3DSA:3.40.1160.10 1 256 1.0E-71 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1824 6fc1d553f257c23cf0fddba3f6397afa 257 Pfam PF00696 Amino acid kinase family 4 234 1.9E-36 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BD65_1824 6fc1d553f257c23cf0fddba3f6397afa 257 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 250 43.407 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BD65_1824 6fc1d553f257c23cf0fddba3f6397afa 257 PIRSF PIRSF000728 1 257 2.5E-69 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BD65_1824 6fc1d553f257c23cf0fddba3f6397afa 257 SUPERFAMILY SSF53633 2 256 2.36E-57 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1824 6fc1d553f257c23cf0fddba3f6397afa 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 8.6E-71 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BD65_1030 cb7dc0725350b59adfca43c568aec798 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 2.6E-55 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 BD65_1030 cb7dc0725350b59adfca43c568aec798 206 PIRSF PIRSF006170 1 206 7.0E-54 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 BD65_1030 cb7dc0725350b59adfca43c568aec798 206 Gene3D G3DSA:1.25.40.10 92 204 7.4E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1030 cb7dc0725350b59adfca43c568aec798 206 SUPERFAMILY SSF48452 92 190 2.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1105 91a79fe1de333c936a8b568a13d21ec3 710 SUPERFAMILY SSF52540 274 444 7.98E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1105 91a79fe1de333c936a8b568a13d21ec3 710 SUPERFAMILY SSF52540 47 212 9.89E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1105 91a79fe1de333c936a8b568a13d21ec3 710 SMART SM00487 99 279 0.0054 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BD65_1105 91a79fe1de333c936a8b568a13d21ec3 710 SMART SM00490 348 429 5.4E-13 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1105 91a79fe1de333c936a8b568a13d21ec3 710 Pfam PF00271 Helicase conserved C-terminal domain 356 429 1.7E-10 T 14-10-2018 IPR001650 Helicase, C-terminal BD65_1105 91a79fe1de333c936a8b568a13d21ec3 710 Gene3D G3DSA:3.40.50.300 278 445 5.4E-28 T 14-10-2018 BD65_1105 91a79fe1de333c936a8b568a13d21ec3 710 Gene3D G3DSA:3.40.50.300 78 246 9.7E-13 T 14-10-2018 BD65_1105 91a79fe1de333c936a8b568a13d21ec3 710 Pfam PF00270 DEAD/DEAH box helicase 106 218 1.6E-6 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BD65_1858 bd68e394caa931f0900f14e8e234bd4e 384 Pfam PF05954 Phage late control gene D protein (GPD) 59 362 1.0E-38 T 14-10-2018 BD65_1858 bd68e394caa931f0900f14e8e234bd4e 384 SUPERFAMILY SSF69279 15 187 2.1E-25 T 14-10-2018 BD65_1680 ce84beee86c34ce7d1bf23afe6bf2b2e 327 SMART SM01060 19 327 1.6E-7 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_1680 ce84beee86c34ce7d1bf23afe6bf2b2e 327 Gene3D G3DSA:1.20.1280.120 34 323 1.6E-93 T 14-10-2018 BD65_1680 ce84beee86c34ce7d1bf23afe6bf2b2e 327 PIRSF PIRSF000296 1 327 3.0E-96 T 14-10-2018 IPR024168 Catalase, SrpA-type, predicted BD65_1680 ce84beee86c34ce7d1bf23afe6bf2b2e 327 Pfam PF00199 Catalase 48 320 6.4E-33 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_1680 ce84beee86c34ce7d1bf23afe6bf2b2e 327 SUPERFAMILY SSF56634 29 326 1.26E-74 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BD65_1680 ce84beee86c34ce7d1bf23afe6bf2b2e 327 Gene3D G3DSA:2.40.180.20 55 309 1.6E-93 T 14-10-2018 BD65_1193 0bae8957e2fa7093b90afcfb2a9a456e 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.084 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BD65_1193 0bae8957e2fa7093b90afcfb2a9a456e 241 Pfam PF00696 Amino acid kinase family 11 219 1.2E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BD65_1193 0bae8957e2fa7093b90afcfb2a9a456e 241 Gene3D G3DSA:3.40.1160.10 3 241 2.4E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1193 0bae8957e2fa7093b90afcfb2a9a456e 241 PIRSF PIRSF005650 4 241 6.7E-90 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 BD65_1193 0bae8957e2fa7093b90afcfb2a9a456e 241 SUPERFAMILY SSF53633 7 239 7.2E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BD65_1193 0bae8957e2fa7093b90afcfb2a9a456e 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 239 1.2E-103 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BD65_1367 5f4ce5cad73aea05603b16950282466b 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 5.5E-64 T 14-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 BD65_1367 5f4ce5cad73aea05603b16950282466b 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 1.9E-29 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BD65_1367 5f4ce5cad73aea05603b16950282466b 141 Gene3D G3DSA:3.30.420.270 63 132 2.1E-27 T 14-10-2018 BD65_2428 86a718caac38daa8c6e4063c13d34d4b 380 Pfam PF01344 Kelch motif 83 126 4.4E-8 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BD65_2428 86a718caac38daa8c6e4063c13d34d4b 380 Gene3D G3DSA:2.120.10.80 18 182 2.8E-15 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BD65_2428 86a718caac38daa8c6e4063c13d34d4b 380 SUPERFAMILY SSF117281 44 371 4.97E-31 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BD65_2428 86a718caac38daa8c6e4063c13d34d4b 380 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 26 371 1.4E-141 T 14-10-2018 IPR019936 Mutatrotase, YjhT-like BD65_2428 86a718caac38daa8c6e4063c13d34d4b 380 Gene3D G3DSA:2.120.10.80 185 375 1.3E-9 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BD65_1731 73c9e12be70410a45cbf35ae33e0fd94 174 Gene3D G3DSA:3.40.1000.10 37 174 1.7E-7 T 14-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich BD65_1731 73c9e12be70410a45cbf35ae33e0fd94 174 Pfam PF08786 DcrB 41 170 1.1E-23 T 14-10-2018 IPR014894 Protein DcrB BD65_2690 b2f5d2b3b7e4d43f94694a0d04eedb98 165 SUPERFAMILY SSF103054 84 159 7.32E-12 T 14-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily BD65_2690 b2f5d2b3b7e4d43f94694a0d04eedb98 165 Gene3D G3DSA:3.30.1360.100 82 163 1.9E-8 T 14-10-2018 BD65_2690 b2f5d2b3b7e4d43f94694a0d04eedb98 165 Pfam PF04612 Type II secretion system (T2SS), protein M 3 157 1.7E-22 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 BD65_3255 c76702ca3d0dac136acde6852c9eb1ed 259 Pfam PF02698 DUF218 domain 80 243 1.7E-24 T 14-10-2018 IPR003848 Domain of unknown function DUF218 BD65_1079 5ff21310e6fc6c8878bacc0fdb25a664 243 Gene3D G3DSA:3.20.20.70 1 243 4.4E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1079 5ff21310e6fc6c8878bacc0fdb25a664 243 SUPERFAMILY SSF63892 4 242 9.94E-101 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BD65_1079 5ff21310e6fc6c8878bacc0fdb25a664 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 8.7E-104 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BD65_1079 5ff21310e6fc6c8878bacc0fdb25a664 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 3.9E-104 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BD65_1079 5ff21310e6fc6c8878bacc0fdb25a664 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 131.997 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BD65_1491 04a91d0934b316b912fb6c08ef95da2f 623 Gene3D G3DSA:2.160.20.10 25 384 3.6E-46 T 14-10-2018 IPR012334 Pectin lyase fold BD65_1491 04a91d0934b316b912fb6c08ef95da2f 623 Pfam PF05860 haemagglutination activity domain 40 133 1.9E-17 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_1491 04a91d0934b316b912fb6c08ef95da2f 623 SMART SM00912 22 135 8.4E-26 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_1491 04a91d0934b316b912fb6c08ef95da2f 623 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 57 130 1.9E-19 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BD65_1491 04a91d0934b316b912fb6c08ef95da2f 623 SUPERFAMILY SSF51126 46 307 5.96E-30 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor BD65_2023 84e7af19fa2813f7fdbfa20077824d43 115 Pfam PF07119 Protein of unknown function (DUF1375) 13 76 3.6E-13 T 14-10-2018 IPR010780 Protein of unknown function DUF1375 BD65_305 78c53d08aa2e3a0e75d95d0d295f007a 245 SMART SM00934 16 237 5.7E-100 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_305 78c53d08aa2e3a0e75d95d0d295f007a 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_305 78c53d08aa2e3a0e75d95d0d295f007a 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 236 6.4E-52 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_305 78c53d08aa2e3a0e75d95d0d295f007a 245 Gene3D G3DSA:3.20.20.70 3 243 2.3E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_305 78c53d08aa2e3a0e75d95d0d295f007a 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 18 238 3.5E-56 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_305 78c53d08aa2e3a0e75d95d0d295f007a 245 SUPERFAMILY SSF51366 15 240 4.16E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BD65_305 78c53d08aa2e3a0e75d95d0d295f007a 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.487 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BD65_251 d10616aa2af08b691067a9c872a2792f 214 Pfam PF01914 MarC family integral membrane protein 10 210 1.7E-73 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BD65_251 d10616aa2af08b691067a9c872a2792f 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 1.5E-79 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BD65_553 327b81a6eb1037bd358fecf12d3e15d7 107 Pfam PF07130 YebG protein 1 74 3.5E-35 T 14-10-2018 IPR009813 Uncharacterised protein family YebG BD65_553 327b81a6eb1037bd358fecf12d3e15d7 107 Gene3D G3DSA:1.10.10.710 21 96 1.1E-13 T 14-10-2018 IPR038627 YebG-like superfamily BD65_793 003d12f25bda522c520b41842eb3fafc 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 27.042 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BD65_793 003d12f25bda522c520b41842eb3fafc 94 Pfam PF01386 Ribosomal L25p family 4 91 3.2E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BD65_793 003d12f25bda522c520b41842eb3fafc 94 SUPERFAMILY SSF50715 1 94 3.49E-29 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_793 003d12f25bda522c520b41842eb3fafc 94 Gene3D G3DSA:2.40.240.10 1 94 6.5E-32 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BD65_793 003d12f25bda522c520b41842eb3fafc 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 94 3.0E-41 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BD65_1341 17ff6b6ad77ade4b11bb4490c86e4b3e 398 Gene3D G3DSA:3.60.120.10 5 392 3.4E-126 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BD65_1341 17ff6b6ad77ade4b11bb4490c86e4b3e 398 SUPERFAMILY SSF56322 43 391 9.29E-98 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BD65_1341 17ff6b6ad77ade4b11bb4490c86e4b3e 398 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 104 389 4.9E-96 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BD65_1341 17ff6b6ad77ade4b11bb4490c86e4b3e 398 Pfam PF00425 chorismate binding enzyme 127 381 1.3E-75 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BD65_1483 39c3b80e13e337be7e815127540718b6 196 Pfam PF13580 SIS domain 9 144 6.4E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_1483 39c3b80e13e337be7e815127540718b6 196 Gene3D G3DSA:3.40.50.10490 2 196 2.8E-70 T 14-10-2018 BD65_1483 39c3b80e13e337be7e815127540718b6 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 60.665 T 14-10-2018 IPR023070 DnaA initiator-associating protein BD65_1483 39c3b80e13e337be7e815127540718b6 196 SUPERFAMILY SSF53697 3 191 7.08E-51 T 14-10-2018 BD65_141 f66c5bb3915f085e86007e4d07071c1d 168 Gene3D G3DSA:3.40.50.1470 1 167 3.1E-56 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BD65_141 f66c5bb3915f085e86007e4d07071c1d 168 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 83 93 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BD65_141 f66c5bb3915f085e86007e4d07071c1d 168 Pfam PF01195 Peptidyl-tRNA hydrolase 27 161 6.7E-40 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BD65_141 f66c5bb3915f085e86007e4d07071c1d 168 SUPERFAMILY SSF53178 1 165 7.19E-53 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BD65_141 f66c5bb3915f085e86007e4d07071c1d 168 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 163 5.5E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BD65_1581 def41a8034c312e08c8e34d04e874458 169 SUPERFAMILY SSF46785 12 144 3.88E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_1581 def41a8034c312e08c8e34d04e874458 169 Gene3D G3DSA:1.10.10.10 1 89 1.5E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1581 def41a8034c312e08c8e34d04e874458 169 Pfam PF01475 Ferric uptake regulator family 20 138 6.9E-14 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BD65_1581 def41a8034c312e08c8e34d04e874458 169 Gene3D G3DSA:3.30.1490.190 90 152 3.6E-14 T 14-10-2018 BD65_387 ffbd2bbc089dc4b08f331dc180a2c9cd 145 Gene3D G3DSA:2.40.128.270 38 140 7.3E-33 T 14-10-2018 IPR038670 HslJ-like superfamily BD65_387 ffbd2bbc089dc4b08f331dc180a2c9cd 145 Pfam PF03724 META domain 32 137 4.1E-18 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ BD65_1134 225457b73f3ac63108e157a08f45a874 112 Pfam PF04899 MbeD/MobD like 3 60 3.8E-8 T 14-10-2018 IPR006983 MbeD/MobD-like BD65_13 04edf9c7cf7aae49335276cc75b241e0 151 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 4.0E-66 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 BD65_13 04edf9c7cf7aae49335276cc75b241e0 151 Pfam PF06303 MatP N-terminal domain 2 85 9.4E-45 T 14-10-2018 IPR035087 MatP, N-terminal BD65_13 04edf9c7cf7aae49335276cc75b241e0 151 Gene3D G3DSA:1.10.1220.10 98 150 4.2E-33 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BD65_13 04edf9c7cf7aae49335276cc75b241e0 151 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.685 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 BD65_13 04edf9c7cf7aae49335276cc75b241e0 151 Gene3D G3DSA:1.20.1270.380 1 89 4.0E-48 T 14-10-2018 IPR038339 MatP, N-terminal domain superfamily BD65_13 04edf9c7cf7aae49335276cc75b241e0 151 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 3.4E-31 T 14-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain BD65_870 e83653a883075f3f9af14f25461f78a8 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 2.2E-69 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like BD65_870 e83653a883075f3f9af14f25461f78a8 190 SUPERFAMILY SSF52507 2 188 1.06E-58 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BD65_870 e83653a883075f3f9af14f25461f78a8 190 Gene3D G3DSA:3.40.50.1950 2 190 5.6E-77 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BD65_870 e83653a883075f3f9af14f25461f78a8 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.958 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like BD65_870 e83653a883075f3f9af14f25461f78a8 190 Pfam PF02441 Flavoprotein 2 165 2.9E-22 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BD65_2473 beda5fe2e5172f5c997157026c5fda93 268 Pfam PF01026 TatD related DNase 12 263 2.6E-66 T 14-10-2018 IPR001130 TatD family GO:0016788 BD65_2473 beda5fe2e5172f5c997157026c5fda93 268 Gene3D G3DSA:3.20.20.140 8 265 8.1E-85 T 14-10-2018 BD65_2473 beda5fe2e5172f5c997157026c5fda93 268 PIRSF PIRSF005902 2 267 9.2E-70 T 14-10-2018 IPR001130 TatD family GO:0016788 BD65_2473 beda5fe2e5172f5c997157026c5fda93 268 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 11 19 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BD65_2473 beda5fe2e5172f5c997157026c5fda93 268 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 135 145 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BD65_2473 beda5fe2e5172f5c997157026c5fda93 268 SUPERFAMILY SSF51556 11 265 3.1E-75 T 14-10-2018 IPR032466 Metal-dependent hydrolase BD65_3108 3998cf09ec27a33840e23f28f54ad6f1 310 Gene3D G3DSA:3.40.190.120 133 246 4.3E-96 T 14-10-2018 BD65_3108 3998cf09ec27a33840e23f28f54ad6f1 310 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 304 2.1E-54 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BD65_3108 3998cf09ec27a33840e23f28f54ad6f1 310 SUPERFAMILY SSF53850 29 308 6.33E-57 T 14-10-2018 BD65_3108 3998cf09ec27a33840e23f28f54ad6f1 310 Gene3D G3DSA:3.40.190.10 32 306 4.3E-96 T 14-10-2018 BD65_3079 ad0a7d79f9f7f76fc600e142ada5b378 350 Gene3D G3DSA:1.10.3470.10 9 347 1.6E-108 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_3079 ad0a7d79f9f7f76fc600e142ada5b378 350 SUPERFAMILY SSF81345 13 341 1.05E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_3079 ad0a7d79f9f7f76fc600e142ada5b378 350 Pfam PF01032 FecCD transport family 21 340 9.6E-93 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BD65_3153 8966de0a2fb502c2a495586856551ac6 138 Gene3D G3DSA:3.30.70.1290 5 137 8.9E-41 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_3153 8966de0a2fb502c2a495586856551ac6 138 SUPERFAMILY SSF143422 6 135 1.83E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_3153 8966de0a2fb502c2a495586856551ac6 138 Pfam PF01797 Transposase IS200 like 15 134 2.3E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_3153 8966de0a2fb502c2a495586856551ac6 138 SMART SM01321 14 134 7.9E-42 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_2665 09acb5e5af5d055fa0b12a21658dc026 264 SMART SM00342 172 255 2.9E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_2665 09acb5e5af5d055fa0b12a21658dc026 264 Gene3D G3DSA:1.10.10.60 158 260 2.6E-17 T 14-10-2018 BD65_2665 09acb5e5af5d055fa0b12a21658dc026 264 Pfam PF12833 Helix-turn-helix domain 178 256 2.2E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_2665 09acb5e5af5d055fa0b12a21658dc026 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 255 9.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_2665 09acb5e5af5d055fa0b12a21658dc026 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 239 9.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BD65_2665 09acb5e5af5d055fa0b12a21658dc026 264 SUPERFAMILY SSF46689 208 256 2.82E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 463 39.075 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 Gene3D G3DSA:1.20.120.640 306 463 5.2E-54 T 14-10-2018 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 Gene3D G3DSA:3.40.50.620 1 305 3.7E-133 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2906 7eb009feb2c184eee5230b37712982cd 463 SMART SM00840 341 402 3.6E-29 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 SUPERFAMILY SSF52374 1 313 3.75E-100 T 14-10-2018 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 462 2.5E-192 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 Pfam PF09190 DALR domain 341 402 3.0E-25 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 7.6E-141 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 SUPERFAMILY SSF47323 316 462 2.75E-41 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 6.2E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 6.2E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 6.2E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BD65_2906 7eb009feb2c184eee5230b37712982cd 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 6.2E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BD65_1164 62c3305bc33b558303dce40b6a933805 271 Gene3D G3DSA:3.40.190.10 115 221 6.5E-101 T 14-10-2018 BD65_1164 62c3305bc33b558303dce40b6a933805 271 Pfam PF03180 NLPA lipoprotein 33 271 1.9E-98 T 14-10-2018 IPR004872 Lipoprotein NlpA family BD65_1164 62c3305bc33b558303dce40b6a933805 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 1.6E-143 T 14-10-2018 IPR004872 Lipoprotein NlpA family BD65_1164 62c3305bc33b558303dce40b6a933805 271 SUPERFAMILY SSF53850 33 271 6.72E-83 T 14-10-2018 BD65_1164 62c3305bc33b558303dce40b6a933805 271 PIRSF PIRSF002854 1 271 8.0E-105 T 14-10-2018 IPR004872 Lipoprotein NlpA family BD65_1164 62c3305bc33b558303dce40b6a933805 271 Gene3D G3DSA:3.40.190.10 34 265 6.5E-101 T 14-10-2018 BD65_160 490a54a78358890bf19e248ad454038b 245 Gene3D G3DSA:3.20.20.140 1 245 1.9E-65 T 14-10-2018 BD65_160 490a54a78358890bf19e248ad454038b 245 Pfam PF02811 PHP domain 5 159 2.0E-8 T 14-10-2018 IPR004013 PHP domain GO:0003824 BD65_160 490a54a78358890bf19e248ad454038b 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.563 T 14-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 BD65_160 490a54a78358890bf19e248ad454038b 245 SMART SM00481 4 78 7.4E-16 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BD65_160 490a54a78358890bf19e248ad454038b 245 SUPERFAMILY SSF89550 3 241 2.22E-62 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BD65_2243 60772636ba59800121786503fe03d1b4 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 3.0E-59 T 14-10-2018 IPR007456 Smg BD65_2243 60772636ba59800121786503fe03d1b4 157 Hamap MF_00598 Protein Smg [smg]. 1 157 32.066 T 14-10-2018 IPR007456 Smg BD65_1153 bc4db233497c5ee8045e375e6fff801c 234 Pfam PF03942 DTW domain 30 213 4.4E-43 T 14-10-2018 IPR005636 DTW BD65_1153 bc4db233497c5ee8045e375e6fff801c 234 SMART SM01144 27 219 2.7E-73 T 14-10-2018 IPR005636 DTW BD65_1929 e8fe91ba6f3ea7c65bdc308d724c0205 323 Pfam PF03595 Voltage-dependent anion channel 19 307 4.3E-33 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 BD65_1929 e8fe91ba6f3ea7c65bdc308d724c0205 323 Gene3D G3DSA:1.50.10.150 6 314 8.3E-44 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily BD65_213 4eed7fbe69e26c43cfd32500dfb1f518 511 Pfam PF04293 SpoVR like protein 20 451 2.2E-176 T 14-10-2018 IPR007390 Sporulation stage V, protein R BD65_1344 52e2f5397ac8f7e1f9bc9d86abf1597f 351 SUPERFAMILY SSF81345 20 345 1.18E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_1344 52e2f5397ac8f7e1f9bc9d86abf1597f 351 Pfam PF01032 FecCD transport family 35 344 3.7E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BD65_1344 52e2f5397ac8f7e1f9bc9d86abf1597f 351 Gene3D G3DSA:1.10.3470.10 22 349 4.9E-90 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_3258 f9607c90bb7524fb9870226e458477b2 242 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 51.218 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 BD65_3258 f9607c90bb7524fb9870226e458477b2 242 Gene3D G3DSA:1.10.10.2250 1 78 4.0E-39 T 14-10-2018 BD65_3258 f9607c90bb7524fb9870226e458477b2 242 Pfam PF04288 MukE-like family 10 227 4.3E-126 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 BD65_3258 f9607c90bb7524fb9870226e458477b2 242 Gene3D G3DSA:1.10.10.2260 88 195 6.8E-54 T 14-10-2018 BD65_2137 a1fa7cfc3ca9fae963a965b85b048d3f 397 SUPERFAMILY SSF103473 10 387 1.7E-29 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_2137 a1fa7cfc3ca9fae963a965b85b048d3f 397 Pfam PF07690 Major Facilitator Superfamily 14 354 1.8E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2137 a1fa7cfc3ca9fae963a965b85b048d3f 397 Gene3D G3DSA:1.20.1250.20 6 389 1.6E-29 T 14-10-2018 BD65_2063 24cd8aa9b4b231d74f96620e1a635704 563 Gene3D G3DSA:3.40.50.10730 142 349 1.0E-263 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_2063 24cd8aa9b4b231d74f96620e1a635704 563 SUPERFAMILY SSF111326 7 555 3.14E-263 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_2063 24cd8aa9b4b231d74f96620e1a635704 563 Pfam PF17391 Urocanase N-terminal domain 12 138 1.1E-62 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_2063 24cd8aa9b4b231d74f96620e1a635704 563 Pfam PF17392 Urocanase C-terminal domain 352 546 1.4E-92 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_2063 24cd8aa9b4b231d74f96620e1a635704 563 Pfam PF01175 Urocanase Rossmann-like domain 141 349 1.7E-87 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_2063 24cd8aa9b4b231d74f96620e1a635704 563 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_2063 24cd8aa9b4b231d74f96620e1a635704 563 PIRSF PIRSF001423 2 561 3.7E-296 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_2063 24cd8aa9b4b231d74f96620e1a635704 563 Gene3D G3DSA:3.40.1770.10 17 542 1.0E-263 T 14-10-2018 BD65_2063 24cd8aa9b4b231d74f96620e1a635704 563 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_2063 24cd8aa9b4b231d74f96620e1a635704 563 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 50.545 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BD65_1136 8b29c05d3ae7736bdab68c90992f2043 111 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 3.1E-56 T 14-10-2018 IPR018994 Protein of unknown function DUF2002 BD65_1136 8b29c05d3ae7736bdab68c90992f2043 111 SUPERFAMILY SSF159894 1 111 1.65E-54 T 14-10-2018 BD65_1136 8b29c05d3ae7736bdab68c90992f2043 111 Gene3D G3DSA:3.90.1150.40 1 111 8.9E-55 T 14-10-2018 BD65_2827 f4c99d3db6453ebfc857fe64ad4cef22 259 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 259 7.8E-53 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 BD65_2827 f4c99d3db6453ebfc857fe64ad4cef22 259 SUPERFAMILY SSF111364 26 259 7.06E-34 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 BD65_1271 0f97b2d8ae46b765479f2582c1000eb9 231 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 30 231 1.7E-71 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 BD65_1271 0f97b2d8ae46b765479f2582c1000eb9 231 Pfam PF03006 Haemolysin-III related 27 224 3.7E-39 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 BD65_2644 49decf86e27d1daad1a6fb63347c75e8 362 Pfam PF04230 Polysaccharide pyruvyl transferase 13 303 2.2E-29 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase BD65_2979 d5cd30eb3e116e41a34881f7cdb8b980 511 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 456 3.7E-109 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 BD65_2979 d5cd30eb3e116e41a34881f7cdb8b980 511 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 494 24.508 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 BD65_2979 d5cd30eb3e116e41a34881f7cdb8b980 511 Gene3D G3DSA:3.60.110.10 213 476 6.4E-11 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BD65_2979 d5cd30eb3e116e41a34881f7cdb8b980 511 Pfam PF00795 Carbon-nitrogen hydrolase 224 474 1.2E-38 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BD65_2979 d5cd30eb3e116e41a34881f7cdb8b980 511 SUPERFAMILY SSF56317 216 488 1.7E-41 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BD65_2382 050cfbbdb17ebc25df381ccb34777dee 193 PIRSF PIRSF020680 1 193 5.4E-57 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 BD65_2382 050cfbbdb17ebc25df381ccb34777dee 193 Gene3D G3DSA:3.40.50.11310 1 193 6.3E-63 T 14-10-2018 IPR038058 PhnH-like superfamily BD65_2382 050cfbbdb17ebc25df381ccb34777dee 193 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 191 3.3E-62 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 BD65_2382 050cfbbdb17ebc25df381ccb34777dee 193 SUPERFAMILY SSF159709 13 192 7.98E-55 T 14-10-2018 IPR038058 PhnH-like superfamily BD65_2382 050cfbbdb17ebc25df381ccb34777dee 193 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 189 6.2E-53 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 BD65_2026 b7645437c8267720ea678d9f01b2581b 552 SUPERFAMILY SSF116726 292 360 1.57E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_2026 b7645437c8267720ea678d9f01b2581b 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 7.5E-45 T 14-10-2018 IPR006512 YidE/YbjL duplication BD65_2026 b7645437c8267720ea678d9f01b2581b 552 Pfam PF06826 Predicted Permease Membrane Region 10 179 1.8E-46 T 14-10-2018 IPR006512 YidE/YbjL duplication BD65_2026 b7645437c8267720ea678d9f01b2581b 552 Gene3D G3DSA:3.30.70.1450 289 364 8.0E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_2026 b7645437c8267720ea678d9f01b2581b 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 55.025 T 14-10-2018 IPR023018 Transport protein YidE, putative BD65_2026 b7645437c8267720ea678d9f01b2581b 552 SUPERFAMILY SSF116726 206 271 7.98E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_2026 b7645437c8267720ea678d9f01b2581b 552 Pfam PF02080 TrkA-C domain 293 358 9.4E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BD65_2026 b7645437c8267720ea678d9f01b2581b 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 8.0E-44 T 14-10-2018 IPR006512 YidE/YbjL duplication BD65_2026 b7645437c8267720ea678d9f01b2581b 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 5.6E-49 T 14-10-2018 IPR006512 YidE/YbjL duplication BD65_2026 b7645437c8267720ea678d9f01b2581b 552 Gene3D G3DSA:3.30.70.1450 199 274 2.3E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BD65_375 fbd3adf0a6ca49e1c282d43e883def0b 183 SUPERFAMILY SSF49777 22 181 4.84E-54 T 14-10-2018 IPR036610 PEBP-like superfamily BD65_375 fbd3adf0a6ca49e1c282d43e883def0b 183 Gene3D G3DSA:3.90.280.10 20 182 1.5E-55 T 14-10-2018 IPR036610 PEBP-like superfamily BD65_375 fbd3adf0a6ca49e1c282d43e883def0b 183 Pfam PF01161 Phosphatidylethanolamine-binding protein 39 180 3.2E-36 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein BD65_375 fbd3adf0a6ca49e1c282d43e883def0b 183 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 41 180 3.0E-49 T 14-10-2018 IPR005247 YbhB/YbcL BD65_1182 4985e8d2715ab1342581dd3d106dcbca 383 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 4.4E-142 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BD65_1182 4985e8d2715ab1342581dd3d106dcbca 383 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 1.2E-170 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BD65_1182 4985e8d2715ab1342581dd3d106dcbca 383 SUPERFAMILY SSF53756 9 354 4.14E-26 T 14-10-2018 BD65_1182 4985e8d2715ab1342581dd3d106dcbca 383 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 42.755 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BD65_2058 98fc6341629f1430d45b94120562d2e6 408 SUPERFAMILY SSF103473 7 400 1.57E-50 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_2058 98fc6341629f1430d45b94120562d2e6 408 Gene3D G3DSA:1.20.1720.10 19 398 2.7E-64 T 14-10-2018 BD65_2058 98fc6341629f1430d45b94120562d2e6 408 Pfam PF07690 Major Facilitator Superfamily 25 364 1.4E-32 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_1370 2c56f91916aba836cbdc9597b891c403 220 Pfam PF09335 SNARE associated Golgi protein 48 172 1.3E-17 T 14-10-2018 IPR032816 SNARE associated Golgi protein BD65_2929 11123e4dab76232f707f73a8dbc4dc08 214 SUPERFAMILY SSF55729 6 150 2.83E-5 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2929 11123e4dab76232f707f73a8dbc4dc08 214 Pfam PF12261 Thermostable hemolysin 15 185 1.9E-56 T 14-10-2018 IPR022050 Thermostable hemolysin BD65_1383 4209a2fd65628f9d518772481bb0db05 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 1.0E-24 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 BD65_1383 4209a2fd65628f9d518772481bb0db05 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 1.0E-19 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BD65_1383 4209a2fd65628f9d518772481bb0db05 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 39.168 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 BD65_1383 4209a2fd65628f9d518772481bb0db05 275 SUPERFAMILY SSF56300 16 271 2.19E-59 T 14-10-2018 BD65_1383 4209a2fd65628f9d518772481bb0db05 275 Gene3D G3DSA:3.60.21.10 5 274 2.0E-69 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BD65_1646 e28aa5c26a379199d36a2eafd998da85 261 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.171 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BD65_1646 e28aa5c26a379199d36a2eafd998da85 261 SUPERFAMILY SSF110399 1 237 1.19E-82 T 14-10-2018 BD65_1646 e28aa5c26a379199d36a2eafd998da85 261 Gene3D G3DSA:3.20.20.70 1 261 1.0E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1646 e28aa5c26a379199d36a2eafd998da85 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 1.4E-107 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BD65_51 9fd22f27fc7947ea58f65f3ae9954520 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.88 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BD65_51 9fd22f27fc7947ea58f65f3ae9954520 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 184 1.6E-53 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BD65_51 9fd22f27fc7947ea58f65f3ae9954520 194 SUPERFAMILY SSF52972 2 185 2.16E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BD65_51 9fd22f27fc7947ea58f65f3ae9954520 194 PIRSF PIRSF006305 1 191 2.6E-41 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BD65_51 9fd22f27fc7947ea58f65f3ae9954520 194 Pfam PF02545 Maf-like protein 3 185 1.2E-43 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BD65_51 9fd22f27fc7947ea58f65f3ae9954520 194 Gene3D G3DSA:3.90.950.10 2 194 1.9E-60 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BD65_2312 050e5d309743045877c43d7591a04756 91 Gene3D G3DSA:3.30.1660.10 20 91 1.0E-19 T 14-10-2018 IPR025543 Dodecin-like BD65_2312 050e5d309743045877c43d7591a04756 91 SUPERFAMILY SSF159871 1 91 7.72E-24 T 14-10-2018 IPR036275 YdgH-like superfamily BD65_2312 050e5d309743045877c43d7591a04756 91 Pfam PF07338 Protein of unknown function (DUF1471) 37 91 1.6E-17 T 14-10-2018 IPR010854 Domain of unknown function DUF1471 BD65_1567 0b8f7627f8ccdc9e46111c03d187194a 549 Gene3D G3DSA:1.20.1530.20 1 346 2.5E-10 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily BD65_1567 0b8f7627f8ccdc9e46111c03d187194a 549 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 1.0E-77 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BD65_1567 0b8f7627f8ccdc9e46111c03d187194a 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 3.8E-207 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 BD65_476 90d27f0db9a389d5e5e2f9272ab5e431 114 SUPERFAMILY SSF103481 32 114 4.32E-16 T 14-10-2018 BD65_476 90d27f0db9a389d5e5e2f9272ab5e431 114 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 2 114 30.384 T 14-10-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE BD65_476 90d27f0db9a389d5e5e2f9272ab5e431 114 Gene3D G3DSA:1.10.3730.20 1 114 7.7E-8 T 14-10-2018 BD65_476 90d27f0db9a389d5e5e2f9272ab5e431 114 Pfam PF00892 EamA-like transporter family 10 111 8.6E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_626 c41dfd24c73cfd074cda275710946895 307 SUPERFAMILY SSF51445 17 278 2.23E-13 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_626 c41dfd24c73cfd074cda275710946895 307 Gene3D G3DSA:3.20.20.80 2 305 4.4E-72 T 14-10-2018 BD65_626 c41dfd24c73cfd074cda275710946895 307 Pfam PF00704 Glycosyl hydrolases family 18 17 194 2.0E-10 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BD65_172 7179f7f0978b8f0216600dbd3864149d 188 Pfam PF06185 YecM protein 10 185 2.8E-68 T 14-10-2018 IPR010393 Protein of unknown function DUF991 BD65_172 7179f7f0978b8f0216600dbd3864149d 188 SUPERFAMILY SSF54593 3 185 1.52E-66 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BD65_172 7179f7f0978b8f0216600dbd3864149d 188 Gene3D G3DSA:3.10.180.10 1 188 3.2E-68 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BD65_3076 a0d8e6512598e2580b3cf958ebaac700 81 Gene3D G3DSA:1.10.720.30 14 73 8.3E-32 T 14-10-2018 IPR036361 SAP domain superfamily BD65_3076 a0d8e6512598e2580b3cf958ebaac700 81 Pfam PF09905 DNA-binding protein VF530 7 68 3.5E-35 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 BD65_783 4beee0ed2244cad9cac1be8b1051d6e4 194 Pfam PF00877 NlpC/P60 family 82 185 2.5E-30 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BD65_783 4beee0ed2244cad9cac1be8b1051d6e4 194 Gene3D G3DSA:3.90.1720.10 65 193 4.2E-44 T 14-10-2018 BD65_783 4beee0ed2244cad9cac1be8b1051d6e4 194 SUPERFAMILY SSF54001 70 188 2.09E-38 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BD65_233 75aad82f47c015cdacf76450d48a6d1a 183 Pfam PF00881 Nitroreductase family 8 161 7.6E-19 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BD65_233 75aad82f47c015cdacf76450d48a6d1a 183 SUPERFAMILY SSF55469 1 180 7.98E-37 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BD65_233 75aad82f47c015cdacf76450d48a6d1a 183 PIRSF PIRSF000232 1 182 3.0E-61 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BD65_233 75aad82f47c015cdacf76450d48a6d1a 183 Gene3D G3DSA:3.40.109.10 1 181 2.3E-39 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BD65_627 ce0566146de482924451dd00446e175f 152 Pfam PF16804 Domain of unknown function (DUF5071) 23 129 4.6E-24 T 14-10-2018 IPR031837 Domain of unknown function DUF5071 BD65_627 ce0566146de482924451dd00446e175f 152 Gene3D G3DSA:1.25.40.750 18 149 2.0E-32 T 14-10-2018 IPR038692 Cthe_2751-like superfamily BD65_2195 2d5db092079776673e1e5e07aebbc38b 72 Pfam PF04102 SlyX 7 72 1.1E-23 T 14-10-2018 IPR007236 SlyX BD65_2195 2d5db092079776673e1e5e07aebbc38b 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.705 T 14-10-2018 IPR007236 SlyX BD65_576 776e46dede4f03e366ff83604498d9b9 162 Pfam PF11158 Protein of unknown function (DUF2938) 8 156 3.4E-64 T 14-10-2018 IPR021329 Protein of unknown function DUF2938 BD65_661 c9ed0d352a8ea37f590dbdf2380c036a 266 SMART SM00062 42 263 1.0E-83 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_661 c9ed0d352a8ea37f590dbdf2380c036a 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site BD65_661 c9ed0d352a8ea37f590dbdf2380c036a 266 Gene3D G3DSA:3.40.190.10 126 225 7.8E-72 T 14-10-2018 BD65_661 c9ed0d352a8ea37f590dbdf2380c036a 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 1.6E-71 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BD65_661 c9ed0d352a8ea37f590dbdf2380c036a 266 Gene3D G3DSA:3.40.190.10 40 260 7.8E-72 T 14-10-2018 BD65_661 c9ed0d352a8ea37f590dbdf2380c036a 266 SUPERFAMILY SSF53850 14 263 1.6E-76 T 14-10-2018 BD65_661 c9ed0d352a8ea37f590dbdf2380c036a 266 SMART SM00079 42 262 1.0E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BD65_115 9ca4afc86a37553b4a73f0920f9d92c1 278 Gene3D G3DSA:3.40.50.80 140 277 5.1E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BD65_115 9ca4afc86a37553b4a73f0920f9d92c1 278 Gene3D G3DSA:2.40.30.10 4 136 8.4E-34 T 14-10-2018 BD65_115 9ca4afc86a37553b4a73f0920f9d92c1 278 Pfam PF08021 Siderophore-interacting FAD-binding domain 21 136 5.4E-36 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting BD65_115 9ca4afc86a37553b4a73f0920f9d92c1 278 Pfam PF04954 Siderophore-interacting protein 143 259 8.7E-32 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain BD65_115 9ca4afc86a37553b4a73f0920f9d92c1 278 SUPERFAMILY SSF63380 9 141 1.29E-12 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BD65_2092 5f3be2631cf27bf7731278cdb85324c1 66 SUPERFAMILY SSF55331 2 63 2.26E-22 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily BD65_2092 5f3be2631cf27bf7731278cdb85324c1 66 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 4.3E-29 T 14-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 BD65_2092 5f3be2631cf27bf7731278cdb85324c1 66 Pfam PF01361 Tautomerase enzyme 2 61 1.5E-23 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 BD65_2092 5f3be2631cf27bf7731278cdb85324c1 66 Gene3D G3DSA:3.30.429.10 2 65 6.6E-26 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily BD65_1891 0e0d1edde9e7dbea1f5cb2f3e2a250f7 82 Pfam PF10809 Protein of unknown function (DUF2732) 14 75 7.0E-18 T 14-10-2018 IPR020126 Protein of unknown function DUF2732 BD65_1891 0e0d1edde9e7dbea1f5cb2f3e2a250f7 82 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 23 68 0.001 T 14-10-2018 IPR020126 Protein of unknown function DUF2732 BD65_508 244465137328c5da3b87bb65b22b9163 297 Gene3D G3DSA:1.10.3470.10 41 272 6.2E-10 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_508 244465137328c5da3b87bb65b22b9163 297 SUPERFAMILY SSF81345 6 266 9.81E-47 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BD65_508 244465137328c5da3b87bb65b22b9163 297 Pfam PF00950 ABC 3 transport family 13 268 1.1E-97 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 BD65_2108 401853b08380572acc858b0a4ccaa77e 209 Pfam PF01810 LysE type translocator 18 207 2.0E-48 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BD65_2108 401853b08380572acc858b0a4ccaa77e 209 PIRSF PIRSF006324 4 209 1.2E-52 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BD65_2999 1a23e1e75692b8ee714524053aaab0c2 464 Gene3D G3DSA:2.40.160.10 24 443 3.5E-32 T 14-10-2018 IPR023614 Porin domain superfamily BD65_2999 1a23e1e75692b8ee714524053aaab0c2 464 Pfam PF03573 outer membrane porin, OprD family 33 433 2.0E-22 T 14-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 BD65_822 5055ca856e372db13dc76aa01ca79590 308 Pfam PF00535 Glycosyl transferase family 2 4 166 1.4E-28 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BD65_822 5055ca856e372db13dc76aa01ca79590 308 SUPERFAMILY SSF53448 2 255 5.95E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_822 5055ca856e372db13dc76aa01ca79590 308 Gene3D G3DSA:3.90.550.10 2 203 3.5E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_1876 af14c7324891d567c8e717ac93f71768 67 Pfam PF05489 Phage Tail Protein X 1 59 9.0E-27 T 14-10-2018 IPR008861 Phage Tail Protein X-like BD65_1876 af14c7324891d567c8e717ac93f71768 67 Gene3D G3DSA:3.10.350.10 1 67 1.8E-30 T 14-10-2018 IPR036779 LysM domain superfamily BD65_1512 f289994642b483d12f33cca37666d52b 187 Gene3D G3DSA:2.60.450.10 60 187 5.2E-49 T 14-10-2018 BD65_1512 f289994642b483d12f33cca37666d52b 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.227 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BD65_1512 f289994642b483d12f33cca37666d52b 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 183 7.4E-55 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BD65_1512 f289994642b483d12f33cca37666d52b 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 184 2.0E-54 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related BD65_1512 f289994642b483d12f33cca37666d52b 187 PIRSF PIRSF028513 1 187 1.0E-40 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BD65_173 ee8a6887ee5cda1ec7c823ddaf20552f 252 Gene3D G3DSA:3.20.20.380 1 247 2.1E-88 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 BD65_173 ee8a6887ee5cda1ec7c823ddaf20552f 252 Pfam PF03932 CutC family 3 199 3.1E-73 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 BD65_173 ee8a6887ee5cda1ec7c823ddaf20552f 252 SUPERFAMILY SSF110395 3 242 3.53E-75 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 BD65_173 ee8a6887ee5cda1ec7c823ddaf20552f 252 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 202 27.538 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 BD65_2802 cdbb5b959df0ab263a2d71c9af6d85ec 604 Pfam PF02355 Protein export membrane protein 422 590 3.5E-16 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BD65_2802 cdbb5b959df0ab263a2d71c9af6d85ec 604 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 590 1.2E-150 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BD65_2802 cdbb5b959df0ab263a2d71c9af6d85ec 604 SUPERFAMILY SSF82866 399 595 2.62E-41 T 14-10-2018 BD65_2802 cdbb5b959df0ab263a2d71c9af6d85ec 604 Gene3D G3DSA:3.30.70.3400 211 426 1.4E-49 T 14-10-2018 BD65_2802 cdbb5b959df0ab263a2d71c9af6d85ec 604 Pfam PF07549 SecD/SecF GG Motif 109 129 5.0E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BD65_2802 cdbb5b959df0ab263a2d71c9af6d85ec 604 Pfam PF13721 SecD export protein N-terminal TM region 1 92 3.2E-29 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain BD65_2802 cdbb5b959df0ab263a2d71c9af6d85ec 604 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 604 48.005 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BD65_2802 cdbb5b959df0ab263a2d71c9af6d85ec 604 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 334 583 3.3E-84 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BD65_2802 cdbb5b959df0ab263a2d71c9af6d85ec 604 Gene3D G3DSA:3.30.1360.200 267 420 1.4E-49 T 14-10-2018 BD65_195 3af5d6753009f6674672ac568b1cb511 109 SUPERFAMILY SSF103481 11 108 4.32E-17 T 14-10-2018 BD65_195 3af5d6753009f6674672ac568b1cb511 109 Gene3D G3DSA:1.10.3730.20 7 109 3.8E-27 T 14-10-2018 BD65_195 3af5d6753009f6674672ac568b1cb511 109 Pfam PF00893 Small Multidrug Resistance protein 10 99 7.4E-27 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BD65_195 3af5d6753009f6674672ac568b1cb511 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 30.1 T 14-10-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 BD65_216 182c847575ac734ba1e47e4a5c55a2b2 397 Pfam PF07690 Major Facilitator Superfamily 10 351 2.9E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_216 182c847575ac734ba1e47e4a5c55a2b2 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BD65_216 182c847575ac734ba1e47e4a5c55a2b2 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 378 1.9E-74 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BD65_216 182c847575ac734ba1e47e4a5c55a2b2 397 Gene3D G3DSA:1.20.1720.10 4 383 1.9E-94 T 14-10-2018 BD65_216 182c847575ac734ba1e47e4a5c55a2b2 397 SUPERFAMILY SSF103473 4 387 9.68E-61 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_216 182c847575ac734ba1e47e4a5c55a2b2 397 PRINTS PR01035 Tetracycline resistance protein signature 44 63 1.4E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BD65_216 182c847575ac734ba1e47e4a5c55a2b2 397 PRINTS PR01035 Tetracycline resistance protein signature 302 322 1.4E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BD65_216 182c847575ac734ba1e47e4a5c55a2b2 397 PRINTS PR01035 Tetracycline resistance protein signature 129 151 1.4E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BD65_216 182c847575ac734ba1e47e4a5c55a2b2 397 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.4E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BD65_222 418b466969355c8835a418cec31d6263 424 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 41.408 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 BD65_222 418b466969355c8835a418cec31d6263 424 Pfam PF04285 Protein of unknown function (DUF444) 4 420 4.8E-184 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 BD65_2408 1437f88dc596e8441c3ad867a59aeca7 192 Pfam PF11726 Inovirus Gp2 21 170 6.5E-12 T 14-10-2018 BD65_1759 494e6bb22c30111a1c3761b805bc0a8b 374 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 33 362 1.7E-140 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX BD65_3109 a851fb9c90dd3f6fe9cc931c11ebcbc0 384 Gene3D G3DSA:1.10.3720.10 168 380 2.9E-33 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3109 a851fb9c90dd3f6fe9cc931c11ebcbc0 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 380 1.1E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_3109 a851fb9c90dd3f6fe9cc931c11ebcbc0 384 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 9.2E-5 T 14-10-2018 BD65_3109 a851fb9c90dd3f6fe9cc931c11ebcbc0 384 PRINTS PR00173 Glutamate-aspartate symporter signature 319 338 9.2E-5 T 14-10-2018 BD65_3109 a851fb9c90dd3f6fe9cc931c11ebcbc0 384 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 9.2E-5 T 14-10-2018 BD65_3109 a851fb9c90dd3f6fe9cc931c11ebcbc0 384 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 9.2E-5 T 14-10-2018 BD65_3109 a851fb9c90dd3f6fe9cc931c11ebcbc0 384 SUPERFAMILY SSF161098 173 371 2.49E-34 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1077 0c7789f805faedfa739fc9e5f604b267 86 Gene3D G3DSA:3.30.70.20 2 86 6.0E-34 T 14-10-2018 BD65_1077 0c7789f805faedfa739fc9e5f604b267 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BD65_1077 0c7789f805faedfa739fc9e5f604b267 86 Pfam PF12838 4Fe-4S dicluster domain 8 56 9.3E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BD65_1077 0c7789f805faedfa739fc9e5f604b267 86 SUPERFAMILY SSF54862 5 64 2.27E-16 T 14-10-2018 BD65_2327 670f138535348815653cc2007467ed9a 117 SUPERFAMILY SSF110857 1 114 5.89E-33 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily BD65_2327 670f138535348815653cc2007467ed9a 117 Gene3D G3DSA:3.10.490.10 1 117 1.0E-40 T 14-10-2018 BD65_2327 670f138535348815653cc2007467ed9a 117 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 7.9E-23 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like BD65_2417 c4d834d4c086b8bcf37fafd1511dc237 218 Pfam PF14487 Domain of unknown function (DUF4433) 17 217 5.7E-54 T 14-10-2018 IPR029494 Domain of unknown function DUF4433 BD65_1819 59d4b604b5a849089034fdf324ee764a 600 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 22 559 2.3E-217 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 BD65_1819 59d4b604b5a849089034fdf324ee764a 600 Gene3D G3DSA:1.20.1560.10 14 321 3.0E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_1819 59d4b604b5a849089034fdf324ee764a 600 Pfam PF00005 ABC transporter 352 499 1.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1819 59d4b604b5a849089034fdf324ee764a 600 Pfam PF00664 ABC transporter transmembrane region 29 286 7.2E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BD65_1819 59d4b604b5a849089034fdf324ee764a 600 SUPERFAMILY SSF90123 16 323 4.05E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BD65_1819 59d4b604b5a849089034fdf324ee764a 600 Gene3D G3DSA:3.40.50.300 333 582 2.3E-61 T 14-10-2018 BD65_1819 59d4b604b5a849089034fdf324ee764a 600 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1819 59d4b604b5a849089034fdf324ee764a 600 SMART SM00382 361 547 6.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1819 59d4b604b5a849089034fdf324ee764a 600 SUPERFAMILY SSF52540 328 548 2.91E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_326 9f55307a5cece8f282234ec791ea8e7a 330 Gene3D G3DSA:1.20.1530.20 7 327 3.5E-33 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily BD65_326 9f55307a5cece8f282234ec791ea8e7a 330 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 1.4E-103 T 14-10-2018 IPR016833 Putative sodium bile acid cotransporter BD65_326 9f55307a5cece8f282234ec791ea8e7a 330 PIRSF PIRSF026166 1 330 1.1E-134 T 14-10-2018 IPR016833 Putative sodium bile acid cotransporter BD65_2585 1c4478d3a7fae7ace34f469cfa1530a0 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 1.1E-44 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 BD65_2585 1c4478d3a7fae7ace34f469cfa1530a0 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.984 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 BD65_2585 1c4478d3a7fae7ace34f469cfa1530a0 120 PIRSF PIRSF006287 1 120 2.5E-50 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 BD65_2585 1c4478d3a7fae7ace34f469cfa1530a0 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 2.0E-55 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 BD65_1880 fa5ba686296b033af65c60c55fbaaf37 281 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 281 7.2E-101 T 14-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 BD65_3143 58c4bdffefd2553446cce5322c0befdc 331 SUPERFAMILY SSF53822 24 329 3.34E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_3143 58c4bdffefd2553446cce5322c0befdc 331 Pfam PF13407 Periplasmic binding protein domain 27 299 4.3E-65 T 14-10-2018 IPR025997 Periplasmic binding protein BD65_3143 58c4bdffefd2553446cce5322c0befdc 331 Gene3D G3DSA:3.40.50.2300 27 301 7.3E-121 T 14-10-2018 BD65_3143 58c4bdffefd2553446cce5322c0befdc 331 Gene3D G3DSA:3.40.50.2300 133 279 7.3E-121 T 14-10-2018 BD65_2335 79a2aeaa42d31fc2d661dc3820c6444c 115 Pfam PF02316 Mu DNA-binding domain 9 61 1.1E-13 T 14-10-2018 IPR003314 Mu-type HTH domain GO:0003677 BD65_2335 79a2aeaa42d31fc2d661dc3820c6444c 115 Gene3D G3DSA:1.10.10.10 2 72 1.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2335 79a2aeaa42d31fc2d661dc3820c6444c 115 SUPERFAMILY SSF46955 3 69 1.28E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BD65_236 1aec9e98294c1dae8d0ca4f9c139381a 144 Gene3D G3DSA:3.90.79.10 1 135 4.1E-36 T 14-10-2018 BD65_236 1aec9e98294c1dae8d0ca4f9c139381a 144 SUPERFAMILY SSF55811 1 126 4.87E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BD65_236 1aec9e98294c1dae8d0ca4f9c139381a 144 Pfam PF00293 NUDIX domain 6 124 3.5E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BD65_236 1aec9e98294c1dae8d0ca4f9c139381a 144 PRINTS PR00502 NUDIX hydrolase family signature 46 61 3.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BD65_236 1aec9e98294c1dae8d0ca4f9c139381a 144 PRINTS PR00502 NUDIX hydrolase family signature 32 46 3.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BD65_2453 ecb3dc5a8e6df4c0e4234e71c00d9421 411 Pfam PF04932 O-Antigen ligase 197 341 3.4E-15 T 14-10-2018 IPR007016 O-antigen ligase-related BD65_2829 1296dc23a2635ef6a3d1a29272a9a82b 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 9.5E-54 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG BD65_2575 8c07a0edf617861b2b94fa6c83f8f0fd 183 SUPERFAMILY SSF55846 2 179 7.07E-69 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_2575 8c07a0edf617861b2b94fa6c83f8f0fd 183 Gene3D G3DSA:3.40.80.10 1 179 1.5E-58 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_2575 8c07a0edf617861b2b94fa6c83f8f0fd 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 166 6.8E-28 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_2575 8c07a0edf617861b2b94fa6c83f8f0fd 183 SMART SM00644 16 166 1.1E-57 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BD65_1063 7bd81ea44853c7bce51dd54122bcef89 432 Pfam PF10797 Protein of unknown function 5 428 6.5E-166 T 14-10-2018 IPR019733 Uncharacterised protein family YhfT BD65_1672 444837d494d916610f76de02e6da5787 177 SUPERFAMILY SSF52218 1 170 1.77E-30 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_1672 444837d494d916610f76de02e6da5787 177 Gene3D G3DSA:3.40.50.360 3 115 1.0E-8 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BD65_1672 444837d494d916610f76de02e6da5787 177 Pfam PF12724 Flavodoxin domain 4 151 8.0E-52 T 14-10-2018 IPR026816 Flavodoxin domain BD65_2025 ce011470998f28ec193235ccc2e60fe8 152 SUPERFAMILY SSF49764 31 134 3.31E-19 T 14-10-2018 IPR008978 HSP20-like chaperone BD65_2025 ce011470998f28ec193235ccc2e60fe8 152 Gene3D G3DSA:2.60.40.790 32 135 5.0E-20 T 14-10-2018 IPR008978 HSP20-like chaperone BD65_2025 ce011470998f28ec193235ccc2e60fe8 152 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 146 46.164 T 14-10-2018 IPR022848 Small heat shock protein IbpB BD65_2025 ce011470998f28ec193235ccc2e60fe8 152 Pfam PF00011 Hsp20/alpha crystallin family 39 134 5.5E-16 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain BD65_1882 3e61227b9fbecaed21a08e6c63bf94ff 342 PIRSF PIRSF018494 1 342 1.6E-154 T 14-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria BD65_1882 3e61227b9fbecaed21a08e6c63bf94ff 342 Pfam PF04860 Phage portal protein 94 322 1.7E-14 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein BD65_1882 3e61227b9fbecaed21a08e6c63bf94ff 342 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 51 330 5.1E-84 T 14-10-2018 IPR006430 Phage portal protein PBSX family BD65_2130 f392d9abfd5b83fa0493c7596ca246fe 228 Gene3D G3DSA:3.40.50.2020 103 227 1.4E-15 T 14-10-2018 BD65_2130 f392d9abfd5b83fa0493c7596ca246fe 228 SUPERFAMILY SSF53271 49 226 2.23E-31 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BD65_2130 f392d9abfd5b83fa0493c7596ca246fe 228 Pfam PF00156 Phosphoribosyl transferase domain 166 225 7.1E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BD65_1029 2e195693c3f51d97362538e10b59dd15 393 Pfam PF13360 PQQ-like domain 78 320 4.3E-53 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BD65_1029 2e195693c3f51d97362538e10b59dd15 393 SUPERFAMILY SSF50998 24 383 1.91E-77 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BD65_1029 2e195693c3f51d97362538e10b59dd15 393 Gene3D G3DSA:2.130.10.10 21 392 3.1E-94 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BD65_1029 2e195693c3f51d97362538e10b59dd15 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 392 8.6E-134 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB BD65_1029 2e195693c3f51d97362538e10b59dd15 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 40.331 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB BD65_1029 2e195693c3f51d97362538e10b59dd15 393 SMART SM00564 156 187 1.2E-4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BD65_1029 2e195693c3f51d97362538e10b59dd15 393 SMART SM00564 115 147 0.0014 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BD65_1029 2e195693c3f51d97362538e10b59dd15 393 SMART SM00564 201 232 67.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BD65_1029 2e195693c3f51d97362538e10b59dd15 393 SMART SM00564 290 321 320.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BD65_1029 2e195693c3f51d97362538e10b59dd15 393 SMART SM00564 330 362 8.1 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BD65_1029 2e195693c3f51d97362538e10b59dd15 393 SMART SM00564 252 283 7.7E-6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BD65_1029 2e195693c3f51d97362538e10b59dd15 393 SMART SM00564 65 96 0.62 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BD65_3208 c910532ae803fec5056d53c08b2b5952 183 Pfam PF12883 Protein of unknown function (DUF3828) 41 166 2.9E-11 T 14-10-2018 IPR024289 Domain of unknown function DUF3828 BD65_2498 c880d0008ed19e856730787faa8b2eb1 437 Pfam PF07690 Major Facilitator Superfamily 28 385 5.4E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_2498 c880d0008ed19e856730787faa8b2eb1 437 Gene3D G3DSA:1.20.1250.20 13 424 4.5E-58 T 14-10-2018 BD65_2498 c880d0008ed19e856730787faa8b2eb1 437 SUPERFAMILY SSF103473 4 417 9.55E-60 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_1739 4f387f187e896e9973f6d863f1b8ca39 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 4.9E-60 T 14-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 BD65_1739 4f387f187e896e9973f6d863f1b8ca39 206 Pfam PF01810 LysE type translocator 14 204 1.3E-49 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BD65_2257 966f1826e79f501170ad4c297ad31075 191 SUPERFAMILY SSF48498 75 164 3.63E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BD65_2257 966f1826e79f501170ad4c297ad31075 191 Gene3D G3DSA:1.10.357.10 1 184 7.6E-26 T 14-10-2018 BD65_2257 966f1826e79f501170ad4c297ad31075 191 SUPERFAMILY SSF46689 3 66 6.67E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1059 2eab973a5518b411cacf4f5f06d2e013 118 SUPERFAMILY SSF63520 46 111 3.92E-6 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 BD65_2757 4185899c449de6d78ca743858a4d300e 255 Gene3D G3DSA:3.60.20.10 1 255 4.9E-97 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_2757 4185899c449de6d78ca743858a4d300e 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 3.6E-114 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 BD65_2757 4185899c449de6d78ca743858a4d300e 255 SUPERFAMILY SSF56235 2 252 1.45E-52 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BD65_2804 d23aadb8f61375658aa6830f08b4ce1f 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.9E-76 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BD65_2804 d23aadb8f61375658aa6830f08b4ce1f 149 Pfam PF03477 ATP cone domain 50 136 9.6E-16 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BD65_2804 d23aadb8f61375658aa6830f08b4ce1f 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.909 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BD65_1076 0bad6d68cad90629dd61e2e625eb18a7 280 Pfam PF01380 SIS domain 126 255 1.8E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BD65_1076 0bad6d68cad90629dd61e2e625eb18a7 280 SUPERFAMILY SSF46689 1 76 3.94E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1076 0bad6d68cad90629dd61e2e625eb18a7 280 Gene3D G3DSA:3.40.50.10490 96 280 1.2E-43 T 14-10-2018 BD65_1076 0bad6d68cad90629dd61e2e625eb18a7 280 Gene3D G3DSA:1.10.10.10 1 80 2.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_1076 0bad6d68cad90629dd61e2e625eb18a7 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.4E-24 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BD65_1076 0bad6d68cad90629dd61e2e625eb18a7 280 SUPERFAMILY SSF53697 102 277 3.89E-38 T 14-10-2018 BD65_924 e24bacc6217f4562311f331f08c2ed5e 415 SUPERFAMILY SSF103473 6 393 2.09E-48 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_924 e24bacc6217f4562311f331f08c2ed5e 415 Gene3D G3DSA:1.20.1250.20 215 411 1.8E-24 T 14-10-2018 BD65_924 e24bacc6217f4562311f331f08c2ed5e 415 Gene3D G3DSA:1.20.1250.20 1 184 2.5E-20 T 14-10-2018 BD65_924 e24bacc6217f4562311f331f08c2ed5e 415 Pfam PF07690 Major Facilitator Superfamily 219 402 1.0E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_1069 5c21e46c7cf9129f5f57879003e038ab 183 Gene3D G3DSA:2.60.40.2550 82 175 3.3E-5 T 14-10-2018 BD65_671 1936747d7cb2cadc1ae2a418b812c47b 290 Pfam PF12833 Helix-turn-helix domain 189 265 5.4E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_671 1936747d7cb2cadc1ae2a418b812c47b 290 Gene3D G3DSA:1.10.10.60 163 270 3.5E-19 T 14-10-2018 BD65_671 1936747d7cb2cadc1ae2a418b812c47b 290 SUPERFAMILY SSF46689 218 271 1.66E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_671 1936747d7cb2cadc1ae2a418b812c47b 290 SMART SM00342 183 265 8.2E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BD65_1612 df560dffdbafb3fc1d9e49f245a6e5ed 152 Pfam PF06841 T4-like virus tail tube protein gp19 15 145 1.5E-28 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 BD65_1612 df560dffdbafb3fc1d9e49f245a6e5ed 152 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 8 146 4.2E-22 T 14-10-2018 IPR011747 Conserved hypothetical protein CHP02241 BD65_506 3c67c31b8470debcf6eaf4e9509d0513 296 Pfam PF00005 ABC transporter 29 174 5.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_506 3c67c31b8470debcf6eaf4e9509d0513 296 Gene3D G3DSA:3.40.50.300 10 249 1.8E-60 T 14-10-2018 BD65_506 3c67c31b8470debcf6eaf4e9509d0513 296 SMART SM00382 36 222 3.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_506 3c67c31b8470debcf6eaf4e9509d0513 296 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_506 3c67c31b8470debcf6eaf4e9509d0513 296 SUPERFAMILY SSF52540 7 238 1.21E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_688 f0e633cdf9705ad17b638c31a7fd0171 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 2.2E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BD65_688 f0e633cdf9705ad17b638c31a7fd0171 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 2.2E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BD65_688 f0e633cdf9705ad17b638c31a7fd0171 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 2.2E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BD65_688 f0e633cdf9705ad17b638c31a7fd0171 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.2E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BD65_688 f0e633cdf9705ad17b638c31a7fd0171 260 Pfam PF01311 Bacterial export proteins, family 1 14 246 2.6E-68 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BD65_688 f0e633cdf9705ad17b638c31a7fd0171 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 253 2.5E-76 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 BD65_301 d627523559843dc7fc6a6d15333b1f5d 101 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 84 3.6E-19 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 BD65_301 d627523559843dc7fc6a6d15333b1f5d 101 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 21.485 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 BD65_2628 3179f0092c604a5b71cdb80ceef03cb2 347 Gene3D G3DSA:3.40.630.10 35 347 6.3E-43 T 14-10-2018 BD65_2628 3179f0092c604a5b71cdb80ceef03cb2 347 SUPERFAMILY SSF53187 46 318 6.56E-36 T 14-10-2018 BD65_2628 3179f0092c604a5b71cdb80ceef03cb2 347 Pfam PF04389 Peptidase family M28 105 325 1.3E-29 T 14-10-2018 IPR007484 Peptidase M28 BD65_2128 92a60aef87eff02d55aa769595f12015 699 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 105 691 3.4E-245 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 BD65_2128 92a60aef87eff02d55aa769595f12015 699 SUPERFAMILY SSF51445 132 692 1.9E-146 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BD65_2128 92a60aef87eff02d55aa769595f12015 699 Gene3D G3DSA:3.20.20.80 145 691 6.1E-121 T 14-10-2018 BD65_2128 92a60aef87eff02d55aa769595f12015 699 Pfam PF02446 4-alpha-glucanotransferase 152 670 1.7E-128 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 BD65_574 c7cb5dc903ef558f0bb07ea443d16ce2 479 Gene3D G3DSA:1.20.1720.10 33 246 2.0E-30 T 14-10-2018 BD65_574 c7cb5dc903ef558f0bb07ea443d16ce2 479 Pfam PF07690 Major Facilitator Superfamily 38 432 8.0E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BD65_574 c7cb5dc903ef558f0bb07ea443d16ce2 479 Gene3D G3DSA:1.20.1250.20 282 477 1.3E-14 T 14-10-2018 BD65_574 c7cb5dc903ef558f0bb07ea443d16ce2 479 SUPERFAMILY SSF103473 30 476 1.96E-51 T 14-10-2018 IPR036259 MFS transporter superfamily BD65_2182 005af80dd1e26a14539ce7d5cbd01ccb 188 Pfam PF00156 Phosphoribosyl transferase domain 37 157 1.0E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BD65_2182 005af80dd1e26a14539ce7d5cbd01ccb 188 Gene3D G3DSA:3.40.50.2020 2 185 9.5E-31 T 14-10-2018 BD65_2182 005af80dd1e26a14539ce7d5cbd01ccb 188 SUPERFAMILY SSF53271 32 182 1.31E-24 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BD65_1475 ebf6fb9075b4a9f9cb122991d88023c8 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 16 127 6.6E-21 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III BD65_1053 e3b5b1c76ab8ef3bfb252b27f0e9a8a0 218 PIRSF PIRSF008159 4 218 4.0E-73 T 14-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, BD65_1053 e3b5b1c76ab8ef3bfb252b27f0e9a8a0 218 Pfam PF06226 Protein of unknown function (DUF1007) 15 217 2.0E-62 T 14-10-2018 IPR010412 Protein of unknown function DUF1007 BD65_2365 185542fde45f241bc6517c57871529ea 292 Pfam PF01136 Peptidase family U32 92 207 6.9E-12 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BD65_958 31c20facae98b53aa4467ca31572803c 199 SUPERFAMILY SSF51366 4 196 1.37E-46 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BD65_958 31c20facae98b53aa4467ca31572803c 199 Gene3D G3DSA:3.20.20.70 1 199 1.7E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_958 31c20facae98b53aa4467ca31572803c 199 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 7 197 1.9E-81 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 BD65_2547 99f77f93a1ed21321812b4a299c99e1a 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 56.93 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BD65_2547 99f77f93a1ed21321812b4a299c99e1a 152 Gene3D G3DSA:2.40.330.20 1 150 9.2E-43 T 14-10-2018 IPR038619 MraZ superfamily BD65_2547 99f77f93a1ed21321812b4a299c99e1a 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.4E-22 T 14-10-2018 IPR020603 MraZ domain BD65_2547 99f77f93a1ed21321812b4a299c99e1a 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 140 3.2E-20 T 14-10-2018 IPR020603 MraZ domain BD65_2547 99f77f93a1ed21321812b4a299c99e1a 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 1.0E-73 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BD65_2547 99f77f93a1ed21321812b4a299c99e1a 152 SUPERFAMILY SSF89447 1 138 3.14E-45 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily BD65_2547 99f77f93a1ed21321812b4a299c99e1a 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 7.2E-61 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BD65_1440 0895c1837662628dd6480fbe3b3f9b8d 257 Gene3D G3DSA:2.60.40.2700 169 256 2.8E-5 T 14-10-2018 BD65_321 3d227da39b6506a5c7196ab3aa297dce 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.2E-60 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BD65_321 3d227da39b6506a5c7196ab3aa297dce 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 8.6E-91 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 BD65_321 3d227da39b6506a5c7196ab3aa297dce 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.504 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 BD65_321 3d227da39b6506a5c7196ab3aa297dce 193 PIRSF PIRSF006102 1 193 1.4E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BD65_1124 c4d1c9d21610a975e2469767912cfb2c 328 Pfam PF13407 Periplasmic binding protein domain 31 288 1.4E-52 T 14-10-2018 IPR025997 Periplasmic binding protein BD65_1124 c4d1c9d21610a975e2469767912cfb2c 328 Gene3D G3DSA:3.40.50.2300 130 267 7.6E-92 T 14-10-2018 BD65_1124 c4d1c9d21610a975e2469767912cfb2c 328 Gene3D G3DSA:3.40.50.2300 31 300 7.6E-92 T 14-10-2018 BD65_1124 c4d1c9d21610a975e2469767912cfb2c 328 SUPERFAMILY SSF53822 27 326 6.39E-64 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BD65_1845 7b0c631b636a5f548830eeff1f9e2aeb 79 Gene3D G3DSA:1.20.5.340 1 79 1.3E-33 T 14-10-2018 BD65_1845 7b0c631b636a5f548830eeff1f9e2aeb 79 Pfam PF06005 Cell division protein ZapB 1 78 7.0E-29 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 BD65_1845 7b0c631b636a5f548830eeff1f9e2aeb 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.011 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 BD65_1189 1169795a1d4f8d568976f0dc6e79d869 282 Pfam PF01148 Cytidylyltransferase family 4 279 1.7E-69 T 14-10-2018 BD65_1189 1169795a1d4f8d568976f0dc6e79d869 282 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 BD65_2462 8173f241600f8552fc8dbb19cb8894ed 94 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 20 59 9.0E-4 T 14-10-2018 IPR009885 Protein of unknown function DUF1435 BD65_2462 8173f241600f8552fc8dbb19cb8894ed 94 Pfam PF07256 Protein of unknown function (DUF1435) 18 90 1.3E-25 T 14-10-2018 IPR009885 Protein of unknown function DUF1435 BD65_3209 a5fb6e8ca2104a1f4a3ec07628e90bf7 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 23.912 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 BD65_3209 a5fb6e8ca2104a1f4a3ec07628e90bf7 107 Gene3D G3DSA:3.30.110.70 2 107 1.2E-47 T 14-10-2018 BD65_3209 a5fb6e8ca2104a1f4a3ec07628e90bf7 107 Pfam PF01906 Putative heavy-metal-binding 2 105 9.3E-41 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 BD65_3209 a5fb6e8ca2104a1f4a3ec07628e90bf7 107 SUPERFAMILY SSF117782 3 105 2.88E-38 T 14-10-2018 IPR035439 UPF0145 domain superfamily BD65_463 a431a8770bd26cb1014c652a4ab0a417 367 Pfam PF01594 AI-2E family transporter 17 346 5.2E-51 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like BD65_2044 1f8720ce8049ca8e009ca237c59105db 184 Pfam PF05068 Mannitol repressor 9 170 5.9E-59 T 14-10-2018 IPR007761 Mannitol repressor MtlR-like BD65_2044 1f8720ce8049ca8e009ca237c59105db 184 Gene3D G3DSA:1.20.120.330 3 172 2.0E-58 T 14-10-2018 BD65_2044 1f8720ce8049ca8e009ca237c59105db 184 SUPERFAMILY SSF158668 7 170 5.23E-55 T 14-10-2018 IPR038026 MtlR-like superfamily BD65_2062 f5f0b3019e3f8d56f052ee1c6e5885a5 671 SUPERFAMILY SSF51126 36 379 3.77E-14 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor BD65_2062 f5f0b3019e3f8d56f052ee1c6e5885a5 671 Gene3D G3DSA:2.160.20.10 37 440 3.5E-12 T 14-10-2018 IPR012334 Pectin lyase fold BD65_2746 552e28e6df9a1d8814c5e81c29662be5 88 Pfam PF01527 Transposase 2 71 6.3E-21 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_2746 552e28e6df9a1d8814c5e81c29662be5 88 SUPERFAMILY SSF46689 1 73 1.02E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_1127 7214a8f15f84b8a320ab658955e3cccb 526 Pfam PF02652 L-lactate permease 1 522 1.5E-137 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 BD65_1127 7214a8f15f84b8a320ab658955e3cccb 526 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 1 525 5.4E-129 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 BD65_3166 fbf50fc42a6c701420d9720070fd982b 297 Pfam PF00483 Nucleotidyl transferase 5 246 3.8E-18 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BD65_3166 fbf50fc42a6c701420d9720070fd982b 297 Gene3D G3DSA:3.90.550.10 2 297 3.0E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_3166 fbf50fc42a6c701420d9720070fd982b 297 SUPERFAMILY SSF53448 1 291 2.93E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_1693 a5ccb7e3e42e2b65402068308beab158 260 Gene3D G3DSA:3.90.190.10 13 259 1.2E-56 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like BD65_1693 a5ccb7e3e42e2b65402068308beab158 260 Pfam PF13350 Tyrosine phosphatase family 13 260 3.7E-62 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type BD65_1693 a5ccb7e3e42e2b65402068308beab158 260 SUPERFAMILY SSF52799 12 259 2.83E-52 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like BD65_2059 760d3e1a4361b7305ab14ed6e41d8a30 330 Pfam PF01757 Acyltransferase family 6 315 9.7E-26 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BD65_2059 760d3e1a4361b7305ab14ed6e41d8a30 330 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 330 38.937 T 14-10-2018 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 BD65_277 a631240c530c26965585c138c3a23e61 254 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 247 2.5E-91 T 14-10-2018 IPR009627 Uncharacterised protein family UPF0259 BD65_277 a631240c530c26965585c138c3a23e61 254 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 249 22.337 T 14-10-2018 IPR009627 Uncharacterised protein family UPF0259 BD65_2792 bcf54da8e0c31060c424d837a940450c 314 Pfam PF12849 PBP superfamily domain 25 268 1.4E-30 T 14-10-2018 IPR024370 PBP domain BD65_2792 bcf54da8e0c31060c424d837a940450c 314 SUPERFAMILY SSF53850 26 309 1.01E-64 T 14-10-2018 BD65_2792 bcf54da8e0c31060c424d837a940450c 314 Gene3D G3DSA:3.40.190.10 114 256 2.8E-100 T 14-10-2018 BD65_2792 bcf54da8e0c31060c424d837a940450c 314 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 27 298 5.9E-66 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 BD65_2792 bcf54da8e0c31060c424d837a940450c 314 Gene3D G3DSA:3.40.190.10 29 300 2.8E-100 T 14-10-2018 BD65_322 d6b5b9cb2ad2591cd284a3793b5ed338 147 Pfam PF10754 Protein of unknown function (DUF2569) 7 145 9.0E-45 T 14-10-2018 IPR019690 Protein of unknown function DUF2569 BD65_720 731f23f654fba2801c7233f61877e447 139 PIRSF PIRSF006276 1 139 6.5E-40 T 14-10-2018 IPR006015 Universal stress protein A BD65_720 731f23f654fba2801c7233f61877e447 139 SUPERFAMILY SSF52402 3 138 9.21E-23 T 14-10-2018 BD65_720 731f23f654fba2801c7233f61877e447 139 Pfam PF00582 Universal stress protein family 3 138 3.7E-13 T 14-10-2018 IPR006016 UspA BD65_720 731f23f654fba2801c7233f61877e447 139 Gene3D G3DSA:3.40.50.620 3 139 7.0E-28 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BD65_2188 766f59264d93c88b99be10067efe35b3 327 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 153 296 1.4E-11 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 BD65_2188 766f59264d93c88b99be10067efe35b3 327 Gene3D G3DSA:3.40.50.2000 174 326 1.5E-19 T 14-10-2018 BD65_2188 766f59264d93c88b99be10067efe35b3 327 SUPERFAMILY SSF53756 3 323 6.91E-51 T 14-10-2018 BD65_2188 766f59264d93c88b99be10067efe35b3 327 Gene3D G3DSA:3.40.50.2000 1 166 2.5E-20 T 14-10-2018 BD65_2638 8e9265f39fe66d1e9fdd7a9d3f91e857 254 SUPERFAMILY SSF64167 2 248 7.46E-82 T 14-10-2018 BD65_2638 8e9265f39fe66d1e9fdd7a9d3f91e857 254 Pfam PF01975 Survival protein SurE 4 181 2.5E-56 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BD65_2638 8e9265f39fe66d1e9fdd7a9d3f91e857 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 233 1.3E-72 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BD65_2638 8e9265f39fe66d1e9fdd7a9d3f91e857 254 Gene3D G3DSA:3.40.1210.10 1 254 1.1E-102 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BD65_2638 8e9265f39fe66d1e9fdd7a9d3f91e857 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 250 38.674 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BD65_2936 48ccc08069cdbdc9c8f5766a252cc651 366 Pfam PF10129 OpgC protein 1 357 4.6E-53 T 14-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC BD65_1726 b2979f1bf610c2e54171416f90c5fb67 106 PIRSF PIRSF028538 1 106 1.1E-43 T 14-10-2018 IPR014949 Protein of unknown function DUF1820 BD65_1726 b2979f1bf610c2e54171416f90c5fb67 106 Pfam PF08850 Domain of unknown function (DUF1820) 7 99 2.6E-40 T 14-10-2018 IPR014949 Protein of unknown function DUF1820 BD65_2950 29067f5a02db0a9b59777a00b192f2bd 251 Pfam PF08874 Domain of unknown function (DUF1835) 5 120 2.1E-17 T 14-10-2018 IPR014973 Protein of unknown function DUF1835 BD65_2950 29067f5a02db0a9b59777a00b192f2bd 251 Pfam PF12395 Protein of unknown function 142 245 1.7E-21 T 14-10-2018 IPR022123 Protein of unknown function DUF3658 BD65_1359 76604ca3ce3c1d745c276583db363df4 384 Gene3D G3DSA:3.40.50.300 154 364 3.4E-12 T 14-10-2018 BD65_1359 76604ca3ce3c1d745c276583db363df4 384 SUPERFAMILY SSF52540 153 341 3.23E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_2262 b23912dc9bdfac5afa519c47c4264fe6 166 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 3.5E-33 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 BD65_21 24dfb55adb6229fac2a5bf7c78a79482 229 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 222 2.3E-47 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 BD65_21 24dfb55adb6229fac2a5bf7c78a79482 229 Hamap MF_00789 UPF0319 protein YccT [yccT]. 4 225 23.875 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 BD65_906 ef35459de3c4fb300b0067ad0cb97a71 165 Pfam PF03918 Cytochrome C biogenesis protein 7 147 4.6E-55 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family BD65_906 ef35459de3c4fb300b0067ad0cb97a71 165 Gene3D G3DSA:1.10.8.640 18 103 2.8E-37 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BD65_1752 59057c5cf0e83d7cdc561b9d958b146d 234 Gene3D G3DSA:3.30.450.40 49 232 2.0E-36 T 14-10-2018 IPR029016 GAF-like domain superfamily BD65_1752 59057c5cf0e83d7cdc561b9d958b146d 234 Pfam PF04340 Protein of unknown function, DUF484 13 231 2.3E-73 T 14-10-2018 IPR007435 Protein of unknown function DUF484 BD65_3077 35b5186e4c6de78ff448ca731153a5a6 679 Pfam PF00593 TonB dependent receptor 173 678 3.0E-25 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BD65_3077 35b5186e4c6de78ff448ca731153a5a6 679 Gene3D G3DSA:2.170.130.10 53 170 9.3E-9 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BD65_3077 35b5186e4c6de78ff448ca731153a5a6 679 SUPERFAMILY SSF56935 75 679 3.21E-71 T 14-10-2018 BD65_3077 35b5186e4c6de78ff448ca731153a5a6 679 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 165 3.9E-8 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BD65_3077 35b5186e4c6de78ff448ca731153a5a6 679 Gene3D G3DSA:2.40.170.20 189 679 3.8E-48 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BD65_2875 c2fd109b6887729278a8fa32967b062a 436 SUPERFAMILY SSF53613 38 418 6.7E-44 T 14-10-2018 IPR029056 Ribokinase-like BD65_2875 c2fd109b6887729278a8fa32967b062a 436 Pfam PF00294 pfkB family carbohydrate kinase 140 296 4.5E-9 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BD65_1664 0f24bddc56ab9162c17b7cbf8eaaf643 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 1.0E-168 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BD65_1664 0f24bddc56ab9162c17b7cbf8eaaf643 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 244 2.5E-15 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 BD65_1664 0f24bddc56ab9162c17b7cbf8eaaf643 316 Gene3D G3DSA:3.40.50.300 9 316 2.7E-93 T 14-10-2018 BD65_1664 0f24bddc56ab9162c17b7cbf8eaaf643 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 187.472 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BD65_1664 0f24bddc56ab9162c17b7cbf8eaaf643 316 PIRSF PIRSF000545 1 316 6.3E-147 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BD65_1664 0f24bddc56ab9162c17b7cbf8eaaf643 316 SUPERFAMILY SSF52540 10 315 5.11E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1853 765ad550fd474a0b2ad7e3b482d23fd2 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 4.8E-94 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1853 765ad550fd474a0b2ad7e3b482d23fd2 255 Pfam PF00121 Triosephosphate isomerase 5 246 9.6E-93 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1853 765ad550fd474a0b2ad7e3b482d23fd2 255 SUPERFAMILY SSF51351 1 250 3.8E-91 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1853 765ad550fd474a0b2ad7e3b482d23fd2 255 Gene3D G3DSA:3.20.20.70 1 255 1.8E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BD65_1853 765ad550fd474a0b2ad7e3b482d23fd2 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 62.023 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1853 765ad550fd474a0b2ad7e3b482d23fd2 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BD65_1999 23a03866e155dbaaccdde8819bb9ea7f 258 Gene3D G3DSA:3.40.50.300 10 256 1.5E-66 T 14-10-2018 BD65_1999 23a03866e155dbaaccdde8819bb9ea7f 258 SMART SM00382 36 238 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BD65_1999 23a03866e155dbaaccdde8819bb9ea7f 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BD65_1999 23a03866e155dbaaccdde8819bb9ea7f 258 Pfam PF00005 ABC transporter 27 182 3.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BD65_1999 23a03866e155dbaaccdde8819bb9ea7f 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 8.2E-120 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BD65_1999 23a03866e155dbaaccdde8819bb9ea7f 258 SUPERFAMILY SSF52540 11 246 1.1E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_487 d8740da00a0ec73bff2b51d34a07e50e 73 Gene3D G3DSA:1.10.3290.10 3 73 3.0E-13 T 14-10-2018 IPR036597 Fido-like domain superfamily BD65_2664 58072d498f32ccebf862f5e4b26bb3f5 395 Pfam PF09480 Type III secretion system protein PrgH-EprH (PrgH) 10 393 1.2E-57 T 14-10-2018 IPR019029 Type III secretion system, PrgH/EprH-like GO:0016021 BD65_2664 58072d498f32ccebf862f5e4b26bb3f5 395 Gene3D G3DSA:3.30.70.1770 301 367 4.1E-14 T 14-10-2018 BD65_2114 8496153a7323ebfcf6e45ee40a5aadb9 197 Pfam PF01914 MarC family integral membrane protein 2 193 6.7E-60 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BD65_2114 8496153a7323ebfcf6e45ee40a5aadb9 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 191 4.6E-32 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BD65_1616 2e9d2d7d0c1bb34d22b96e449ac92d9f 149 Pfam PF06841 T4-like virus tail tube protein gp19 16 144 3.9E-34 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 BD65_1616 2e9d2d7d0c1bb34d22b96e449ac92d9f 149 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 11 147 2.9E-36 T 14-10-2018 IPR011747 Conserved hypothetical protein CHP02241 BD65_1705 92258ab79eb521f67dc3111fc17d2446 766 Pfam PF16967 E-set like domain 260 328 4.5E-19 T 14-10-2018 IPR032636 Pilus assembly protein, E-set like domain BD65_406 11784f6372ffdc624292130dfaefc931 221 Pfam PF04012 PspA/IM30 family 2 216 2.8E-46 T 14-10-2018 IPR007157 PspA/IM30 BD65_406 11784f6372ffdc624292130dfaefc931 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 1.2E-93 T 14-10-2018 IPR014319 Phage shock protein, PspA BD65_1587 a634d038f16ab2395c63d69e38120903 301 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 74 205 3.1E-52 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 BD65_2411 1ed521b3ea780923bca12b35747de189 264 Gene3D G3DSA:3.30.420.10 92 243 6.4E-16 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BD65_2411 1ed521b3ea780923bca12b35747de189 264 Pfam PF13276 HTH-like domain 26 80 2.5E-9 T 14-10-2018 IPR025948 HTH-like domain BD65_2411 1ed521b3ea780923bca12b35747de189 264 Pfam PF13683 Integrase core domain 180 246 9.6E-28 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BD65_2411 1ed521b3ea780923bca12b35747de189 264 SUPERFAMILY SSF53098 89 251 3.41E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BD65_1223 b185731e4678303a13d19f7dcc31d181 160 Pfam PF10713 Protein of unknown function (DUF2509) 18 158 3.6E-37 T 14-10-2018 IPR019652 Protein of unknown function DUF2509 BD65_1868 18c1b83653c6bbddcaeffecbcd50c7bf 115 SUPERFAMILY SSF160719 14 114 7.45E-29 T 14-10-2018 BD65_1868 18c1b83653c6bbddcaeffecbcd50c7bf 115 Gene3D G3DSA:3.10.450.40 5 115 1.8E-20 T 14-10-2018 BD65_1868 18c1b83653c6bbddcaeffecbcd50c7bf 115 Pfam PF04965 Gene 25-like lysozyme 21 104 1.3E-15 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD BD65_1310 7da39109072cf23c1a3e34f41be38c24 341 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 9.7E-127 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 BD65_1310 7da39109072cf23c1a3e34f41be38c24 341 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 194 208 - T 14-10-2018 IPR001482 Type II/IV secretion system protein BD65_1310 7da39109072cf23c1a3e34f41be38c24 341 Gene3D G3DSA:3.30.450.90 1 100 5.1E-22 T 14-10-2018 BD65_1310 7da39109072cf23c1a3e34f41be38c24 341 Pfam PF00437 Type II/IV secretion system protein 123 272 3.9E-39 T 14-10-2018 IPR001482 Type II/IV secretion system protein BD65_1310 7da39109072cf23c1a3e34f41be38c24 341 SUPERFAMILY SSF52540 4 333 6.19E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BD65_1310 7da39109072cf23c1a3e34f41be38c24 341 Gene3D G3DSA:3.40.50.300 102 340 1.3E-86 T 14-10-2018 BD65_3 aab298f68aa8091f0d76b88adff8d20b 182 Pfam PF07126 Cell-division protein ZapC 3 169 3.6E-69 T 14-10-2018 IPR009809 Cell division protein ZapC BD65_3 aab298f68aa8091f0d76b88adff8d20b 182 PIRSF PIRSF010252 1 178 9.7E-63 T 14-10-2018 IPR009809 Cell division protein ZapC BD65_3 aab298f68aa8091f0d76b88adff8d20b 182 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 177 40.553 T 14-10-2018 IPR009809 Cell division protein ZapC BD65_347 980795311b94309992ee369217717208 994 PIRSF PIRSF034585 1 994 0.0 T 14-10-2018 IPR009216 Virulence factor SrfB BD65_347 980795311b94309992ee369217717208 994 Pfam PF07520 Virulence factor SrfB 1 991 0.0 T 14-10-2018 IPR009216 Virulence factor SrfB BD65_2041 4a55fd0c1f67d7d3109a20b80e267d89 196 Pfam PF05229 Spore Coat Protein U domain 27 192 1.4E-14 T 14-10-2018 IPR007893 Spore coat protein U BD65_2298 a223400e975db017cf15496c9c6dc55a 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 1.6E-22 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 BD65_629 716d9ae50ee7f160d3dfebed1f93e1ae 153 Gene3D G3DSA:3.40.630.30 1 148 1.6E-40 T 14-10-2018 BD65_629 716d9ae50ee7f160d3dfebed1f93e1ae 153 Pfam PF13673 Acetyltransferase (GNAT) domain 37 148 1.0E-14 T 14-10-2018 IPR000182 GNAT domain BD65_629 716d9ae50ee7f160d3dfebed1f93e1ae 153 SUPERFAMILY SSF55729 1 148 4.15E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2006 6b9fbd6e231e3f8ef9492477c302926e 181 Gene3D G3DSA:2.60.40.1090 31 180 1.9E-27 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 BD65_2006 6b9fbd6e231e3f8ef9492477c302926e 181 SUPERFAMILY SSF49401 32 181 1.74E-24 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_2006 6b9fbd6e231e3f8ef9492477c302926e 181 Pfam PF00419 Fimbrial protein 33 181 1.6E-15 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 BD65_894 6281453f2f1f5ef15f24ff73121c31e0 268 Pfam PF01925 Sulfite exporter TauE/SafE 14 248 4.7E-46 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BD65_1240 890d7e616bae60a76a01e26964b2827b 214 Gene3D G3DSA:3.40.30.10 1 214 3.4E-50 T 14-10-2018 BD65_1240 890d7e616bae60a76a01e26964b2827b 214 Pfam PF01323 DSBA-like thioredoxin domain 9 186 1.2E-8 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 BD65_1240 890d7e616bae60a76a01e26964b2827b 214 SUPERFAMILY SSF52833 5 193 1.02E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BD65_734 7ef363503f2e910a7d91ff6b8d5dee00 47 Gene3D G3DSA:3.30.160.390 1 38 7.0E-6 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily BD65_1421 7e090bdda62ffe9e6339363014e35e45 446 Pfam PF03235 Protein of unknown function DUF262 18 181 2.4E-29 T 14-10-2018 IPR004919 Domain of unknown function DUF262 BD65_1833 be2305d5ec4428dfa2c308c762f71a59 390 SUPERFAMILY SSF56112 119 255 3.77E-6 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BD65_2177 d06794e516103151d9232221d9a55684 691 Pfam PF12805 FUSC-like inner membrane protein yccS 65 331 2.8E-69 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal BD65_2177 d06794e516103151d9232221d9a55684 691 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 671 8.4E-189 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK BD65_2177 d06794e516103151d9232221d9a55684 691 Pfam PF13515 Fusaric acid resistance protein-like 379 498 1.5E-19 T 14-10-2018 BD65_1915 cc3d60381e7a80493e08cf6acd2e41fd 321 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 313 1.0E-68 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 BD65_1915 cc3d60381e7a80493e08cf6acd2e41fd 321 Gene3D G3DSA:3.40.50.2000 1 163 3.5E-61 T 14-10-2018 BD65_1915 cc3d60381e7a80493e08cf6acd2e41fd 321 SUPERFAMILY SSF53756 1 318 1.04E-74 T 14-10-2018 BD65_1915 cc3d60381e7a80493e08cf6acd2e41fd 321 Gene3D G3DSA:3.40.50.2000 164 321 2.8E-54 T 14-10-2018 BD65_1915 cc3d60381e7a80493e08cf6acd2e41fd 321 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 319 3.2E-123 T 14-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 BD65_833 09764110a56f7071265fac9a628b544e 103 Pfam PF05957 Bacterial protein of unknown function (DUF883) 11 103 9.7E-29 T 14-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 BD65_114 03a3b20baf2eea307b6dbd9c403defdd 369 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 11 367 2.4E-104 T 14-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 BD65_114 03a3b20baf2eea307b6dbd9c403defdd 369 Pfam PF01699 Sodium/calcium exchanger protein 42 192 1.7E-13 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BD65_114 03a3b20baf2eea307b6dbd9c403defdd 369 Pfam PF01699 Sodium/calcium exchanger protein 227 366 8.5E-8 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BD65_2393 24565b6af755c0b265aa1b2813f75e4c 364 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 3.5E-117 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 BD65_2393 24565b6af755c0b265aa1b2813f75e4c 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 1.9E-75 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 BD65_498 7b62b1e45bbdffb9004e39d047966570 70 Pfam PF13619 KTSC domain 7 64 3.8E-24 T 14-10-2018 IPR025309 KTSC domain BD65_1239 e75eaebe65ce0ca9fcbf5ce3b0b49985 295 SMART SM00849 43 228 5.3E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_1239 e75eaebe65ce0ca9fcbf5ce3b0b49985 295 Pfam PF00753 Metallo-beta-lactamase superfamily 44 228 1.1E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase BD65_1239 e75eaebe65ce0ca9fcbf5ce3b0b49985 295 Gene3D G3DSA:3.60.15.10 23 262 3.6E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_1239 e75eaebe65ce0ca9fcbf5ce3b0b49985 295 SUPERFAMILY SSF56281 27 251 3.05E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BD65_612 04de586144878393f6067b9d4a1dd338 105 SUPERFAMILY SSF52794 4 103 7.59E-32 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BD65_612 04de586144878393f6067b9d4a1dd338 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 8.4E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BD65_612 04de586144878393f6067b9d4a1dd338 105 Gene3D G3DSA:3.40.50.2300 1 105 6.5E-34 T 14-10-2018 BD65_162 f2899db28d2489c9b4a7bdfe78b097f6 187 Pfam PF07273 Protein of unknown function (DUF1439) 29 180 1.4E-56 T 14-10-2018 IPR010835 Protein of unknown function DUF1439 BD65_162 f2899db28d2489c9b4a7bdfe78b097f6 187 Gene3D G3DSA:3.15.10.40 17 187 1.7E-69 T 14-10-2018 BD65_2037 87b2622dda008ed7e4985b77e14ad6f6 338 Pfam PF05229 Spore Coat Protein U domain 194 334 8.5E-22 T 14-10-2018 IPR007893 Spore coat protein U BD65_2037 87b2622dda008ed7e4985b77e14ad6f6 338 Pfam PF05229 Spore Coat Protein U domain 15 166 1.4E-7 T 14-10-2018 IPR007893 Spore coat protein U BD65_616 1650a02086744af1c6519105e3fc309a 505 Pfam PF03553 Na+/H+ antiporter family 185 479 7.5E-35 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BD65_1910 bf40e0c27aeaa6650ca40eebdf78ca44 317 Gene3D G3DSA:3.20.20.370 12 229 1.3E-74 T 14-10-2018 BD65_1910 bf40e0c27aeaa6650ca40eebdf78ca44 317 Pfam PF04748 Divergent polysaccharide deacetylase 18 228 1.7E-78 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase BD65_1910 bf40e0c27aeaa6650ca40eebdf78ca44 317 SUPERFAMILY SSF88713 14 228 6.45E-73 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BD65_1104 acdb2ed59f6977d2ca53169bdacbda91 539 Pfam PF14130 Domain of unknown function (DUF4297) 14 206 2.0E-23 T 14-10-2018 IPR025382 Domain of unknown function DUF4297 BD65_2310 54afb9d11b49b3321ee678a75f316c65 102 Pfam PF07338 Protein of unknown function (DUF1471) 47 102 4.0E-17 T 14-10-2018 IPR010854 Domain of unknown function DUF1471 BD65_2310 54afb9d11b49b3321ee678a75f316c65 102 Gene3D G3DSA:3.30.1660.10 34 102 4.6E-14 T 14-10-2018 IPR025543 Dodecin-like BD65_2310 54afb9d11b49b3321ee678a75f316c65 102 SUPERFAMILY SSF159871 5 102 1.83E-20 T 14-10-2018 IPR036275 YdgH-like superfamily BD65_589 e3be4c8b4c76940a2a68de783d50f3ae 79 Pfam PF10964 Protein of unknown function (DUF2766) 2 78 3.9E-47 T 14-10-2018 IPR020262 Uncharacterised protein family YecJ BD65_589 e3be4c8b4c76940a2a68de783d50f3ae 79 ProDom PD060536 YECJ YPO1738 1 78 2.0E-36 T 14-10-2018 IPR020262 Uncharacterised protein family YecJ BD65_1366 97d748402d8468503f54611bb8213ed3 464 SUPERFAMILY SSF53300 166 448 1.21E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BD65_981 e1cf881cdb87f863db31ce956d4d03f9 63 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 62 26.828 T 14-10-2018 IPR020910 Uncharacterised protein family UPF0370 BD65_981 e1cf881cdb87f863db31ce956d4d03f9 63 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 61 1.1E-35 T 14-10-2018 IPR020910 Uncharacterised protein family UPF0370 BD65_876 c12ca66b6422d8dde3b480a0e5f85d92 220 Pfam PF09335 SNARE associated Golgi protein 49 176 2.2E-25 T 14-10-2018 IPR032816 SNARE associated Golgi protein BD65_1760 6c5f718e866179ecca2f132e2debf409 397 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 5.6E-126 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 BD65_1760 6c5f718e866179ecca2f132e2debf409 397 Gene3D G3DSA:1.25.40.10 91 391 1.1E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1760 6c5f718e866179ecca2f132e2debf409 397 SUPERFAMILY SSF48452 162 383 7.39E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BD65_1760 6c5f718e866179ecca2f132e2debf409 397 Pfam PF07219 HemY protein N-terminus 26 132 7.2E-32 T 14-10-2018 IPR010817 HemY, N-terminal BD65_229 280975939aa257456efe4fff18158d20 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 82 1.6E-27 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 BD65_1932 877113766679ad3ce6e4017b36aa22f8 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 71 207 2.1E-14 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BD65_1932 877113766679ad3ce6e4017b36aa22f8 288 Gene3D G3DSA:3.90.226.10 1 226 2.5E-80 T 14-10-2018 BD65_1932 877113766679ad3ce6e4017b36aa22f8 288 SUPERFAMILY SSF52096 23 255 5.2E-31 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BD65_1423 ad37c15f37401e55e4ba517ea0878b4c 538 Pfam PF08878 Domain of unknown function (DUF1837) 294 519 4.3E-35 T 14-10-2018 IPR014976 Protein of unknown function DUF1837 BD65_1423 ad37c15f37401e55e4ba517ea0878b4c 538 Pfam PF14130 Domain of unknown function (DUF4297) 5 215 1.1E-49 T 14-10-2018 IPR025382 Domain of unknown function DUF4297 BD65_3000 b79a7bbb8e8978403d7cada46961fde6 108 Pfam PF13982 YbfN-like lipoprotein 22 108 4.0E-43 T 14-10-2018 IPR025727 YbfN-like lipoprotein BD65_432 53cff28b5b48dab7c72d7184876ec116 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 1.9E-18 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 BD65_22 6cec0abf5df399b80461f824ec250f00 137 Gene3D G3DSA:3.40.50.720 1 137 1.7E-41 T 14-10-2018 BD65_22 6cec0abf5df399b80461f824ec250f00 137 SUPERFAMILY SSF51735 2 135 5.19E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BD65_22 6cec0abf5df399b80461f824ec250f00 137 SMART SM00881 9 104 1.2E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 BD65_22 6cec0abf5df399b80461f824ec250f00 137 Pfam PF13380 CoA binding domain 14 130 5.2E-37 T 14-10-2018 IPR003781 CoA-binding GO:0048037 BD65_1890 6fc4b48858af4ec2dbb755fd44aabfb3 105 ProDom PD067735 GP81 ORF2 GPA 5'REGION ORF81 8 78 1.0E-4 T 14-10-2018 BD65_1890 6fc4b48858af4ec2dbb755fd44aabfb3 105 Pfam PF17399 Domain of unknown function (DUF5405) 20 94 5.9E-10 T 14-10-2018 IPR035404 Domain of unknown function DUF5405 BD65_2863 ca66ad42c6d5718400bee65d93ce95c8 143 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 6 137 1.7E-17 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 BD65_2075 7d960da214160f530fea082ebc8aaca8 339 SUPERFAMILY SSF161098 89 323 1.1E-22 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2075 7d960da214160f530fea082ebc8aaca8 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 8.8E-48 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_2273 61596c5dd624f50dc4dbaec32b2da80f 174 Gene3D G3DSA:2.60.40.1090 28 173 4.8E-38 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 BD65_2273 61596c5dd624f50dc4dbaec32b2da80f 174 SUPERFAMILY SSF49401 30 173 9.44E-39 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_2273 61596c5dd624f50dc4dbaec32b2da80f 174 Pfam PF00419 Fimbrial protein 32 173 1.4E-19 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 BD65_2451 b00d25255a7e90a9706a911da8f18cc2 159 Pfam PF10696 Protein of unknown function (DUF2501) 78 156 2.4E-28 T 14-10-2018 IPR019637 Protein of unknown function DUF2501 BD65_2170 093585fb62d1ce13a91bee5ad420dc00 145 Pfam PF11162 Protein of unknown function (DUF2946) 15 141 2.7E-13 T 14-10-2018 IPR021333 Protein of unknown function DUF2946 BD65_1023 ee152f2133b4db832f442b3c58ea57a6 650 Gene3D G3DSA:2.60.20.10 26 120 1.5E-15 T 14-10-2018 BD65_1023 ee152f2133b4db832f442b3c58ea57a6 650 SUPERFAMILY SSF49695 30 119 7.69E-9 T 14-10-2018 IPR011024 Gamma-crystallin-like BD65_373 7c54b2bf13096c07018af59758a84e86 126 SUPERFAMILY SSF54593 3 123 1.65E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BD65_373 7c54b2bf13096c07018af59758a84e86 126 Gene3D G3DSA:3.10.180.10 7 125 1.2E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BD65_373 7c54b2bf13096c07018af59758a84e86 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 122 2.3E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BD65_362 6e7dc1862df203b292f9f481f0ea822d 86 SUPERFAMILY SSF51658 2 38 6.39E-7 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily BD65_2270 df0cda3dc9e04aef55bc8b33869b5020 330 Gene3D G3DSA:2.60.40.1090 187 329 2.4E-6 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 BD65_2270 df0cda3dc9e04aef55bc8b33869b5020 330 Pfam PF00419 Fimbrial protein 192 329 1.2E-8 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 BD65_2270 df0cda3dc9e04aef55bc8b33869b5020 330 SUPERFAMILY SSF49401 197 329 1.84E-9 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_1361 a1fe5207b9d16102554a24777ec12a8a 296 Pfam PF00482 Type II secretion system (T2SS), protein F 129 253 6.0E-17 T 14-10-2018 IPR018076 Type II secretion system F domain BD65_984 c65d7f5db82736155a55e8441eeccf51 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.691 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame BD65_984 c65d7f5db82736155a55e8441eeccf51 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 1.8E-46 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame BD65_984 c65d7f5db82736155a55e8441eeccf51 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 132 2.0E-25 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame BD65_2781 80f2211d7baf9ab79de69aa9334a8059 256 SMART SM00346 1 95 5.7E-7 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BD65_2781 80f2211d7baf9ab79de69aa9334a8059 256 Gene3D G3DSA:3.30.450.40 73 248 1.3E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily BD65_2781 80f2211d7baf9ab79de69aa9334a8059 256 Gene3D G3DSA:1.10.10.10 1 67 2.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BD65_2781 80f2211d7baf9ab79de69aa9334a8059 256 Pfam PF09339 IclR helix-turn-helix domain 7 59 1.1E-6 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BD65_2781 80f2211d7baf9ab79de69aa9334a8059 256 Pfam PF01614 Bacterial transcriptional regulator 125 239 2.8E-16 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal BD65_2781 80f2211d7baf9ab79de69aa9334a8059 256 SUPERFAMILY SSF55781 64 248 3.79E-31 T 14-10-2018 BD65_2781 80f2211d7baf9ab79de69aa9334a8059 256 SUPERFAMILY SSF46785 2 79 9.39E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BD65_838 5ac9848eafd906e2677cb831600c07a8 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.983 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 BD65_838 5ac9848eafd906e2677cb831600c07a8 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 1.8E-22 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BD65_1382 bcbd1c7c9041a17a6ef7c08e75dc739e 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 1.4E-69 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BD65_1382 bcbd1c7c9041a17a6ef7c08e75dc739e 193 SUPERFAMILY SSF53474 3 188 2.7E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1382 bcbd1c7c9041a17a6ef7c08e75dc739e 193 Gene3D G3DSA:3.40.50.1820 1 193 8.8E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_156 8b73c64f8b0f55c619be3f1a41a94544 295 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 30 171 2.5E-21 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BD65_156 8b73c64f8b0f55c619be3f1a41a94544 295 Gene3D G3DSA:3.20.20.190 19 295 7.1E-40 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_156 8b73c64f8b0f55c619be3f1a41a94544 295 SUPERFAMILY SSF51695 25 293 1.62E-44 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BD65_1552 db5834bb93568eaceaffcb4411f45759 199 Pfam PF01794 Ferric reductase like transmembrane component 48 161 2.6E-15 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain BD65_1552 db5834bb93568eaceaffcb4411f45759 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 5 197 21.082 T 14-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 BD65_1315 8536b4866d30bc3c182cf089cdc09b01 197 Gene3D G3DSA:3.90.950.10 1 197 1.2E-82 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BD65_1315 8536b4866d30bc3c182cf089cdc09b01 197 Pfam PF01725 Ham1 family 4 192 1.1E-56 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BD65_1315 8536b4866d30bc3c182cf089cdc09b01 197 SUPERFAMILY SSF52972 1 196 4.45E-74 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BD65_1315 8536b4866d30bc3c182cf089cdc09b01 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.911 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 BD65_1315 8536b4866d30bc3c182cf089cdc09b01 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 7.8E-68 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BD65_1319 63f72db98ad54c73adf2ec385f1ec9ce 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 2.6E-42 T 14-10-2018 IPR007416 Protein of unknown function DUF469 BD65_2850 38733ee1a6483f578da0a5c408efffe4 67 Gene3D G3DSA:1.20.1280.40 1 67 3.6E-37 T 14-10-2018 IPR036666 HHA superfamily BD65_2850 38733ee1a6483f578da0a5c408efffe4 67 SUPERFAMILY SSF68989 1 67 1.57E-30 T 14-10-2018 IPR036666 HHA superfamily BD65_2850 38733ee1a6483f578da0a5c408efffe4 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 2.4E-33 T 14-10-2018 IPR007985 Haemolysin expression modulating, HHA BD65_2578 244425cde4cf9eb780da49d4404ecf82 454 Gene3D G3DSA:1.20.1740.10 10 453 1.2E-55 T 14-10-2018 BD65_2578 244425cde4cf9eb780da49d4404ecf82 454 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BD65_2578 244425cde4cf9eb780da49d4404ecf82 454 Pfam PF00324 Amino acid permease 18 446 1.0E-114 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BD65_2578 244425cde4cf9eb780da49d4404ecf82 454 PIRSF PIRSF006060 1 453 2.2E-71 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BD65_2036 4f4c3880eed1ff2bb3e560346a1cd973 239 Pfam PF11254 Protein of unknown function (DUF3053) 18 234 9.6E-93 T 14-10-2018 IPR021413 Protein of unknown function DUF3053 BD65_939 173c644e4a875a25e32730999b02c26b 187 Pfam PF06042 Nucleotidyltransferase 25 179 1.3E-62 T 14-10-2018 IPR009267 Putative nucleotidyltransferase BD65_1121 342c463a053db06f6e5edef4e5b444dc 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 309 2.4E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BD65_1877 0b4f0ad1eb0ad79340601b8c1c2a9e13 168 Pfam PF05926 Phage head completion protein (GPL) 30 168 7.3E-48 T 14-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 BD65_1099 26e1a4aa26029d71839cf1f9b28b23c3 113 Gene3D G3DSA:3.30.1450.10 34 113 1.3E-30 T 14-10-2018 IPR037873 BamE-like BD65_1099 26e1a4aa26029d71839cf1f9b28b23c3 113 Pfam PF04355 SmpA / OmlA family 35 104 1.2E-26 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 BD65_1099 26e1a4aa26029d71839cf1f9b28b23c3 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 32.466 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE BD65_2783 266865fc0c201423537f1c4b6d844542 317 Pfam PF06675 Protein of unknown function (DUF1177) 40 307 3.0E-129 T 14-10-2018 IPR009561 Protein of unknown function DUF1177 BD65_1917 7cb213c3a15cd874a6af3bd583812ffb 253 SUPERFAMILY SSF53448 3 151 1.69E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_1917 7cb213c3a15cd874a6af3bd583812ffb 253 Pfam PF00535 Glycosyl transferase family 2 8 132 2.5E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BD65_1917 7cb213c3a15cd874a6af3bd583812ffb 253 Gene3D G3DSA:3.90.550.10 1 221 7.4E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BD65_2944 c08569bdbb0e0ed92d8fa770a3aa4c69 453 Pfam PF11329 Protein of unknown function (DUF3131) 66 430 2.6E-140 T 14-10-2018 IPR021478 Protein of unknown function DUF3131 BD65_2304 ffcd7f8eccf0734b52688050a33e3a5a 208 Pfam PF06551 Protein of unknown function (DUF1120) 33 103 1.2E-8 T 14-10-2018 IPR010546 Protein of unknown function DUF1120 BD65_2830 83280acd59ecf860725a3a7e089ed060 106 Pfam PF01722 BolA-like protein 12 85 1.1E-29 T 14-10-2018 IPR002634 BolA protein BD65_2830 83280acd59ecf860725a3a7e089ed060 106 Gene3D G3DSA:3.30.300.90 2 91 1.3E-35 T 14-10-2018 BD65_2830 83280acd59ecf860725a3a7e089ed060 106 SUPERFAMILY SSF82657 3 90 2.49E-30 T 14-10-2018 IPR036065 BolA-like superfamily BD65_2830 83280acd59ecf860725a3a7e089ed060 106 PIRSF PIRSF003113 1 101 2.9E-33 T 14-10-2018 IPR002634 BolA protein BD65_1471 5c100636dc1e29c70251fb935660de88 226 Pfam PF09335 SNARE associated Golgi protein 48 172 1.5E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein BD65_1208 6046df5da0cfb88b91b5658f0741b76d 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 1.2E-23 T 14-10-2018 IPR006696 Protein of unknown function DUF423 BD65_1445 6aebeb3a1656becc3b5238bebd85d679 422 SUPERFAMILY SSF51905 1 416 7.12E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1445 6aebeb3a1656becc3b5238bebd85d679 422 Gene3D G3DSA:3.50.50.60 206 314 1.2E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1445 6aebeb3a1656becc3b5238bebd85d679 422 Gene3D G3DSA:3.50.50.60 1 119 2.0E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BD65_1445 6aebeb3a1656becc3b5238bebd85d679 422 Pfam PF01593 Flavin containing amine oxidoreductase 10 299 1.1E-18 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BD65_45 067e02e64edae23e2fb659744ff05014 79 Gene3D G3DSA:3.30.910.10 1 79 1.4E-33 T 14-10-2018 IPR036687 DinI-like superfamily BD65_45 067e02e64edae23e2fb659744ff05014 79 SUPERFAMILY SSF54857 1 78 2.88E-27 T 14-10-2018 IPR036687 DinI-like superfamily BD65_45 067e02e64edae23e2fb659744ff05014 79 Pfam PF06183 DinI-like family 14 76 1.5E-28 T 14-10-2018 IPR010391 DNA damage-inducible protein DinI-like BD65_2686 de6bb5ee578935390ae13e11b046c7ad 464 Pfam PF03929 PepSY-associated TM region 18 388 9.6E-61 T 14-10-2018 IPR005625 PepSY-associated TM protein BD65_1295 4cca26859a7c544b9bf9aba94aeff9d2 104 Pfam PF00355 Rieske [2Fe-2S] domain 2 89 5.6E-20 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BD65_1295 4cca26859a7c544b9bf9aba94aeff9d2 104 SUPERFAMILY SSF50022 1 101 1.31E-31 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BD65_1295 4cca26859a7c544b9bf9aba94aeff9d2 104 Gene3D G3DSA:2.102.10.10 1 104 1.7E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BD65_439 88eb1d0887f2f47ea3d80248884de968 270 Pfam PF00877 NlpC/P60 family 152 262 8.1E-31 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BD65_439 88eb1d0887f2f47ea3d80248884de968 270 Gene3D G3DSA:3.90.1720.10 131 265 3.0E-40 T 14-10-2018 BD65_439 88eb1d0887f2f47ea3d80248884de968 270 SUPERFAMILY SSF54001 133 264 1.28E-39 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BD65_994 2b79f4281f4c63c0fcbb0c37832b03a4 428 Pfam PF00860 Permease family 16 383 1.8E-103 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BD65_994 2b79f4281f4c63c0fcbb0c37832b03a4 428 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 404 2.7E-127 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BD65_994 2b79f4281f4c63c0fcbb0c37832b03a4 428 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BD65_1111 a69ef7e06d4c8097da3afc44a6bd3723 181 Pfam PF10554 Ash protein family 21 128 1.4E-30 T 14-10-2018 IPR018880 Bacteriophage P4, Ash protein BD65_2700 fb688d0718c358dcff8c6871a3c65927 156 Gene3D G3DSA:2.30.30.830 89 156 1.2E-23 T 14-10-2018 BD65_2700 fb688d0718c358dcff8c6871a3c65927 156 Pfam PF11356 Type II secretion system protein C 12 155 9.8E-21 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal BD65_1695 fbbfecc79e7c749af4b8e4ee1cd5ec00 280 Gene3D G3DSA:3.40.50.1820 33 272 7.3E-76 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1695 fbbfecc79e7c749af4b8e4ee1cd5ec00 280 SUPERFAMILY SSF53474 38 272 4.71E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_1695 fbbfecc79e7c749af4b8e4ee1cd5ec00 280 Pfam PF01738 Dienelactone hydrolase family 50 272 3.9E-73 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 BD65_1505 ea1a729d0babe4fa69ec3d72a4f047e1 208 Pfam PF05494 MlaC protein 31 195 9.2E-51 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BD65_1505 ea1a729d0babe4fa69ec3d72a4f047e1 208 Gene3D G3DSA:3.10.450.710 21 200 8.9E-40 T 14-10-2018 BD65_1505 ea1a729d0babe4fa69ec3d72a4f047e1 208 PIRSF PIRSF004649 1 208 3.3E-58 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BD65_2660 e4f38d444668ee7b9958177859b8840b 176 Pfam PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) 5 151 5.0E-9 T 14-10-2018 IPR013388 Type III secretion apparatus protein OrgA/MxiK GO:0009405 BD65_1368 cde224aaccdc4011c4cb095daec2311c 339 Pfam PF01618 MotA/TolQ/ExbB proton channel family 192 301 5.8E-35 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BD65_1368 cde224aaccdc4011c4cb095daec2311c 339 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 106 317 1.8E-94 T 14-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 BD65_689 efb8a12c9a4aacb3046b9d0355d6d44a 328 Gene3D G3DSA:1.20.1330.10 40 274 3.4E-65 T 14-10-2018 BD65_689 efb8a12c9a4aacb3046b9d0355d6d44a 328 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 194 9.2E-64 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 BD65_689 efb8a12c9a4aacb3046b9d0355d6d44a 328 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 2.4E-21 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BD65_689 efb8a12c9a4aacb3046b9d0355d6d44a 328 SUPERFAMILY SSF64518 2 326 1.83E-59 T 14-10-2018 BD65_1326 924b48e66645649272c1e84017e99dfa 118 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 10 106 4.8E-18 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 BD65_1326 924b48e66645649272c1e84017e99dfa 118 Gene3D G3DSA:2.30.30.110 9 116 1.2E-32 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor BD65_1326 924b48e66645649272c1e84017e99dfa 118 SUPERFAMILY SSF50118 9 113 2.07E-24 T 14-10-2018 BD65_2650 b35ea31204804448c76d4171f881fcf1 60 SUPERFAMILY SSF48295 7 47 1.15E-5 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BD65_3015 839b262104e8d850e8536d1e98e8ccc2 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 64 1.6E-36 T 14-10-2018 IPR019663 Uncharacterised protein YbfA BD65_2014 6d668f973c698343bd3a8f9eb4b45a07 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 2.0E-20 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BD65_2014 6d668f973c698343bd3a8f9eb4b45a07 85 SMART SM01234 8 75 1.5E-43 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BD65_2014 6d668f973c698343bd3a8f9eb4b45a07 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 82 5.2E-32 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BD65_2014 6d668f973c698343bd3a8f9eb4b45a07 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.446 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BD65_2014 6d668f973c698343bd3a8f9eb4b45a07 85 Pfam PF01809 Haemolytic domain 10 75 2.3E-29 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BD65_1405 885cb45de812cf91de0f9efcebdfcf61 282 Pfam PF13708 Domain of unknown function (DUF4942) 88 276 4.2E-58 T 14-10-2018 IPR031339 Domain of unknown function DUF4942 BD65_630 eb682f7f5aab927583388824068d4f0f 132 SMART SM01321 1 77 1.5E-8 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_630 eb682f7f5aab927583388824068d4f0f 132 Gene3D G3DSA:3.30.70.1290 1 84 3.1E-23 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_630 eb682f7f5aab927583388824068d4f0f 132 Pfam PF01797 Transposase IS200 like 1 77 2.8E-24 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BD65_630 eb682f7f5aab927583388824068d4f0f 132 SUPERFAMILY SSF143422 1 78 3.92E-25 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BD65_2889 b4e0c1e52382c2383bb43a639b52996a 178 Gene3D G3DSA:3.40.50.2000 1 137 2.4E-6 T 14-10-2018 BD65_3104 f338670fb4edaef2c911eb1d481fba8f 287 Gene3D G3DSA:1.10.3720.10 85 283 5.0E-31 T 14-10-2018 IPR035906 MetI-like superfamily BD65_3104 f338670fb4edaef2c911eb1d481fba8f 287 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 282 8.1E-85 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 BD65_3104 f338670fb4edaef2c911eb1d481fba8f 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 269 2.5E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_3104 f338670fb4edaef2c911eb1d481fba8f 287 SUPERFAMILY SSF161098 89 273 4.06E-32 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2402 3889716b3413ad741daa9db8b8730c26 117 TIGRFAM TIGR03184 DNA_S_dndE: DNA sulfur modification protein DndE 8 106 1.3E-23 T 14-10-2018 IPR014969 DNA sulphur modification protein DndE BD65_2402 3889716b3413ad741daa9db8b8730c26 117 Gene3D G3DSA:1.10.1220.160 1 108 9.9E-47 T 14-10-2018 IPR038472 DndE superfamily BD65_2402 3889716b3413ad741daa9db8b8730c26 117 Pfam PF08870 DNA sulphur modification protein DndE 5 110 1.4E-28 T 14-10-2018 IPR014969 DNA sulphur modification protein DndE BD65_2914 55d1b7fe7e43ceb614b8793f42775ab9 160 Pfam PF00419 Fimbrial protein 27 159 1.3E-15 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 BD65_2914 55d1b7fe7e43ceb614b8793f42775ab9 160 SUPERFAMILY SSF49401 35 158 1.09E-19 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_2914 55d1b7fe7e43ceb614b8793f42775ab9 160 Gene3D G3DSA:2.60.40.1090 38 158 2.7E-33 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 BD65_338 d03bcc47132c46cc813f3fdc6edf9e5c 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 106 3.6E-42 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 BD65_338 d03bcc47132c46cc813f3fdc6edf9e5c 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.374 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 BD65_1258 456507679049acfbc75e141850e66048 312 Pfam PF02470 MlaD protein 48 115 1.1E-11 T 14-10-2018 IPR003399 Mce/MlaD BD65_2106 0f93be881dd226d093b133f99be1bd50 498 Pfam PF01384 Phosphate transporter family 30 487 2.4E-88 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 BD65_1537 9ee318e643a5219d36524b2b308cd3e2 653 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 2 652 54.379 T 14-10-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0046942 BD65_1537 9ee318e643a5219d36524b2b308cd3e2 653 Pfam PF04632 Fusaric acid resistance protein family 10 650 1.7E-158 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 BD65_2595 e6b5f4b739058f28686dea7af6278b19 435 Gene3D G3DSA:3.20.20.370 179 420 1.3E-58 T 14-10-2018 BD65_2595 e6b5f4b739058f28686dea7af6278b19 435 SUPERFAMILY SSF88713 206 401 1.21E-27 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BD65_2595 e6b5f4b739058f28686dea7af6278b19 435 Pfam PF01522 Polysaccharide deacetylase 243 380 3.3E-17 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BD65_1863 57a169f903387820d5489978e6d4dfb8 395 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 113 279 6.1E-35 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain BD65_1863 57a169f903387820d5489978e6d4dfb8 395 Pfam PF17482 Phage tail sheath C-terminal domain 280 382 2.0E-18 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain BD65_998 7dca33854b67ac2046ce1f2ff46fbb89 181 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 9.2E-21 T 14-10-2018 IPR000182 GNAT domain BD65_998 7dca33854b67ac2046ce1f2ff46fbb89 181 Gene3D G3DSA:3.40.630.30 5 174 1.1E-48 T 14-10-2018 BD65_998 7dca33854b67ac2046ce1f2ff46fbb89 181 SUPERFAMILY SSF55729 4 164 6.58E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_1506 ef24497777eda55ad9b8620004d3aba2 180 Pfam PF02470 MlaD protein 39 116 8.6E-19 T 14-10-2018 IPR003399 Mce/MlaD BD65_1506 ef24497777eda55ad9b8620004d3aba2 180 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 152 4.3E-54 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 BD65_401 336de0db0b237fc5540d652e9331350e 352 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 348 38.969 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 BD65_401 336de0db0b237fc5540d652e9331350e 352 Pfam PF05128 Domain of unknown function (DUF697) 183 342 2.2E-56 T 14-10-2018 IPR021147 Protein of unknown function DUF697 BD65_401 336de0db0b237fc5540d652e9331350e 352 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 57 342 2.3E-135 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 BD65_668 84be4fd24da37484f4ff39e584d18a7a 469 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 1.0E-19 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 BD65_668 84be4fd24da37484f4ff39e584d18a7a 469 Pfam PF07196 Flagellin hook IN motif 128 185 2.3E-12 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BD65_668 84be4fd24da37484f4ff39e584d18a7a 469 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 229 458 4.0E-64 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 BD65_1168 b36b74fde8bb265718c2de2a4282a238 227 Pfam PF04170 NlpE N-terminal domain 38 122 1.4E-25 T 14-10-2018 IPR007298 Copper resistance lipoprotein NlpE BD65_1168 b36b74fde8bb265718c2de2a4282a238 227 Pfam PF17185 NlpE C-terminal OB domain 136 224 7.3E-33 T 14-10-2018 IPR033450 NlpE, C-terminal OB domain BD65_1168 b36b74fde8bb265718c2de2a4282a238 227 Gene3D G3DSA:2.40.128.300 20 111 1.1E-27 T 14-10-2018 BD65_1168 b36b74fde8bb265718c2de2a4282a238 227 Gene3D G3DSA:2.40.50.540 137 226 1.6E-29 T 14-10-2018 IPR038139 NlpE, C-terminal domain superfamily BD65_349 ef73f39e989708d55b14f86a74aa0a7f 186 Pfam PF06821 Serine hydrolase 7 174 1.0E-49 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 BD65_349 ef73f39e989708d55b14f86a74aa0a7f 186 SUPERFAMILY SSF53474 5 169 9.34E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_349 ef73f39e989708d55b14f86a74aa0a7f 186 Gene3D G3DSA:3.40.50.1820 2 180 3.6E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BD65_278 4d2c9ce3dfcf8acde77505d373e6eb42 138 Pfam PF03692 Putative zinc- or iron-chelating domain 7 98 1.2E-11 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein BD65_614 e89461c591d5817d481dee7a8e426714 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 8.6E-57 T 14-10-2018 IPR018636 Protein of unknown function DUF2058 BD65_1477 4767032142e82af7c1312aab616f586d 131 Pfam PF07681 DoxX 8 88 1.6E-16 T 14-10-2018 IPR032808 DoxX family BD65_1010 1c3423e5d0603ec9ac8e6bab325a51de 352 Gene3D G3DSA:2.60.40.1090 211 352 1.3E-23 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 BD65_1010 1c3423e5d0603ec9ac8e6bab325a51de 352 SUPERFAMILY SSF49401 212 352 9.44E-18 T 14-10-2018 IPR008966 Adhesion domain superfamily BD65_1010 1c3423e5d0603ec9ac8e6bab325a51de 352 Pfam PF00419 Fimbrial protein 209 352 2.2E-13 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 BD65_794 2d3266fdf7b22207b3a21d6257978987 336 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.361 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 BD65_794 2d3266fdf7b22207b3a21d6257978987 336 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.9E-99 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 BD65_1462 e579ab52ffc9f419298ccc8ad440ff8e 327 Pfam PF03741 Integral membrane protein TerC family 80 282 1.5E-55 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BD65_1462 e579ab52ffc9f419298ccc8ad440ff8e 327 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 312 7.4E-121 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 BD65_1407 d7538297ff4be66657273084a77d2f6b 127 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 6.8E-55 T 14-10-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system BD65_3152 020306d232f6d3bfb9893baa225e37f2 135 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.216 T 14-10-2018 IPR022957 Uncharacterised protein family UPF0299 BD65_3152 020306d232f6d3bfb9893baa225e37f2 135 Pfam PF03788 LrgA family 23 113 6.0E-31 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 BD65_2265 5a97390e2939910cf4481272bfe8a334 114 Pfam PF13698 Domain of unknown function (DUF4156) 23 113 2.6E-32 T 14-10-2018 IPR025294 Protein of unknown function DUF4156 BD65_1432 99da4a25892eacf3b7b7a4fac00f9ef4 78 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 26 75 4.2E-12 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA BD65_2268 9e1deb1ac0b7324369c95eae9ee5d858 197 Gene3D G3DSA:2.70.50.50 28 196 1.2E-70 T 14-10-2018 BD65_2268 9e1deb1ac0b7324369c95eae9ee5d858 197 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 28 193 4.5E-34 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal BD65_2268 9e1deb1ac0b7324369c95eae9ee5d858 197 SUPERFAMILY SSF81296 28 195 1.82E-60 T 14-10-2018 IPR014756 Immunoglobulin E-set BD65_2679 44e942afc729ee610eefffc52ef6200b 659 Pfam PF04888 Secretion system effector C (SseC) like family 338 655 4.2E-29 T 14-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 BD65_1794 f2e021a825fdc903dd3d68a5ca506618 112 Pfam PF04219 Protein of unknown function, DUF 10 98 1.6E-39 T 14-10-2018 IPR007335 Protein of unknown function DUF413 BD65_428 a565adbaa1fca124e7e567eec6a47c9f 155 Pfam PF05433 Glycine zipper 2TM domain 62 103 8.3E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 BD65_354 21acf68e75b500d895f82fd21fa6332d 61 Gene3D G3DSA:3.90.79.10 2 43 1.6E-7 T 14-10-2018 BD65_585 772c3d88d160eab5fd7480c534df4cb7 81 Pfam PF13269 Protein of unknown function (DUF4060) 3 74 2.3E-38 T 14-10-2018 IPR025135 Protein of unknown function DUF4060 BD65_1942 d168223f63a3cf3654a9e6d5fa51755e 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 3.9E-192 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 BD65_1942 d168223f63a3cf3654a9e6d5fa51755e 404 Pfam PF03616 Sodium/glutamate symporter 2 366 1.4E-160 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 BD65_1942 d168223f63a3cf3654a9e6d5fa51755e 404 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.687 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 BD65_1000 d2a5dcbe9430470151244a3cb932366b 549 SUPERFAMILY SSF161098 267 532 2.75E-37 T 14-10-2018 IPR035906 MetI-like superfamily BD65_1000 d2a5dcbe9430470151244a3cb932366b 549 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 281 541 2.3E-76 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 BD65_1000 d2a5dcbe9430470151244a3cb932366b 549 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 545 2.1E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BD65_1000 d2a5dcbe9430470151244a3cb932366b 549 Gene3D G3DSA:1.10.3720.10 293 544 2.6E-32 T 14-10-2018 IPR035906 MetI-like superfamily BD65_2891 e2a161439d696e09e43dcd34929876c8 159 PIRSF PIRSF006181 1 159 2.8E-56 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BD65_2891 e2a161439d696e09e43dcd34929876c8 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 4.5E-55 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BD65_2891 e2a161439d696e09e43dcd34929876c8 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 2.5E-27 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BD65_2891 e2a161439d696e09e43dcd34929876c8 159 SUPERFAMILY SSF55826 2 155 5.62E-46 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BD65_2891 e2a161439d696e09e43dcd34929876c8 159 Gene3D G3DSA:3.90.960.10 1 159 2.5E-63 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BD65_588 799b81dc572620817fa6d5e56da1f720 75 Pfam PF13996 YobH-like protein 1 69 3.3E-35 T 14-10-2018 IPR025611 YobH-like protein BD65_1690 7c9efa16e0e4289526d324a0616aa6df 510 Pfam PF02646 RmuC family 171 468 5.1E-104 T 14-10-2018 IPR003798 DNA recombination RmuC BD65_1062 5de581c73542c2e4e612f0ad1e506435 117 Pfam PF10941 Protein of unknown function DUF2620 2 116 1.0E-45 T 14-10-2018 IPR021238 Protein of unknown function DUF2620 BD65_2105 e9ba4e94d48520c0d597971c8f03fbb0 111 Pfam PF10625 Universal stress protein B (UspB) 1 106 7.7E-55 T 14-10-2018 IPR019598 Universal stress protein B BD65_2105 e9ba4e94d48520c0d597971c8f03fbb0 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 37.343 T 14-10-2018 IPR019598 Universal stress protein B BD65_3126 ba26452ca05efd6f2760b8a66cf3c0cd 295 Pfam PF00892 EamA-like transporter family 150 279 2.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_3126 ba26452ca05efd6f2760b8a66cf3c0cd 295 SUPERFAMILY SSF103481 187 282 1.83E-10 T 14-10-2018 BD65_1784 3b47d5d8923f5c447b824b65a728cf6d 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 3.9E-25 T 14-10-2018 BD65_1784 3b47d5d8923f5c447b824b65a728cf6d 93 Gene3D G3DSA:3.10.50.40 2 93 5.8E-38 T 14-10-2018 BD65_1784 3b47d5d8923f5c447b824b65a728cf6d 93 SUPERFAMILY SSF54534 4 90 9.81E-31 T 14-10-2018 BD65_2648 90fb39588ced5acf5f67d3b76186bcd7 343 Pfam PF01757 Acyltransferase family 9 319 1.0E-23 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BD65_2470 3bb0e78f3981dc9db4cdcfab25652301 204 SMART SM00749 62 125 1.3E-9 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria BD65_2470 3bb0e78f3981dc9db4cdcfab25652301 204 SMART SM00749 141 204 1.9E-10 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria BD65_2470 3bb0e78f3981dc9db4cdcfab25652301 204 Pfam PF04972 BON domain 136 204 2.1E-19 T 14-10-2018 IPR007055 BON domain BD65_2470 3bb0e78f3981dc9db4cdcfab25652301 204 Pfam PF04972 BON domain 58 124 3.4E-18 T 14-10-2018 IPR007055 BON domain BD65_38 719f10fb2a25dbbfc60a22ca0f951e16 94 SUPERFAMILY SSF54909 1 82 4.02E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BD65_38 719f10fb2a25dbbfc60a22ca0f951e16 94 Pfam PF03795 YCII-related domain 1 79 1.9E-9 T 14-10-2018 IPR005545 YCII-related BD65_2440 014df45705c1cf1d9adf9972e0844e49 296 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 295 1.7E-80 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 BD65_2535 4823566b6b12af4dbe6d0c1a0e14a2c3 57 Pfam PF15894 Inhibitor of glucose uptake transporter SgrT 6 54 2.7E-22 T 14-10-2018 IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 BD65_2445 7667533ac45c6d2937cc50d391c0fb41 352 Pfam PF07470 Glycosyl Hydrolase Family 88 18 350 6.0E-70 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 BD65_2445 7667533ac45c6d2937cc50d391c0fb41 352 Gene3D G3DSA:1.50.10.10 8 352 5.6E-103 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BD65_2445 7667533ac45c6d2937cc50d391c0fb41 352 SUPERFAMILY SSF48208 36 351 1.79E-52 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BD65_2187 cdfa3e51723f98e5efcad701f95ff1c2 200 Pfam PF01810 LysE type translocator 16 185 2.1E-15 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BD65_3088 95506a80fa8806c52949dce3c10a0b76 368 Pfam PF12698 ABC-2 family transporter protein 25 356 2.5E-47 T 14-10-2018 BD65_3088 95506a80fa8806c52949dce3c10a0b76 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 1.1E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BD65_3088 95506a80fa8806c52949dce3c10a0b76 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 1.1E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BD65_3088 95506a80fa8806c52949dce3c10a0b76 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.1E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BD65_3009 f5c35e42dbd10ad05d655a45e49d965c 142 SUPERFAMILY SSF103481 41 141 1.7E-13 T 14-10-2018 BD65_3009 f5c35e42dbd10ad05d655a45e49d965c 142 Pfam PF00892 EamA-like transporter family 4 140 5.6E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BD65_107 39cae90ad3dd4978e2d9c9798a11d388 206 Gene3D G3DSA:1.20.950.20 5 196 2.2E-20 T 14-10-2018 BD65_107 39cae90ad3dd4978e2d9c9798a11d388 206 SUPERFAMILY SSF81342 13 206 3.45E-33 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BD65_107 39cae90ad3dd4978e2d9c9798a11d388 206 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 171 193 2.5E-5 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 BD65_107 39cae90ad3dd4978e2d9c9798a11d388 206 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 19 42 2.5E-5 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 BD65_107 39cae90ad3dd4978e2d9c9798a11d388 206 Pfam PF01292 Prokaryotic cytochrome b561 16 205 1.4E-22 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BD65_503 9c0e45cc8d2180417700c70e468ecfae 226 Pfam PF01914 MarC family integral membrane protein 8 217 1.6E-63 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BD65_503 9c0e45cc8d2180417700c70e468ecfae 226 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 12 215 2.1E-37 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BD65_1465 d3db01f7f0e31c7071a776c021675de3 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 495 1.9E-155 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 BD65_1465 d3db01f7f0e31c7071a776c021675de3 496 Gene3D G3DSA:3.90.1210.30 3 85 1.6E-25 T 14-10-2018 BD65_1465 d3db01f7f0e31c7071a776c021675de3 496 SMART SM00858 11 82 1.4E-11 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BD65_1465 d3db01f7f0e31c7071a776c021675de3 496 Pfam PF08666 SAF domain 11 80 5.8E-12 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BD65_540 adc12de46588c0e6df15d64b23ef0911 113 Pfam PF10709 Protein of unknown function (DUF2511) 25 111 5.5E-38 T 14-10-2018 IPR019648 Protein of unknown function DUF2511 BD65_2423 0a6dd7ef8fd035fc1c21331cfb528ba1 316 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 36 303 7.7E-29 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system BD65_3239 0f73ab75e5db93ddf022beb5410b9751 588 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 2.5E-159 T 14-10-2018 IPR003776 YcaO-like domain BD65_3239 0f73ab75e5db93ddf022beb5410b9751 588 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 1.6E-78 T 14-10-2018 IPR003776 YcaO-like domain BD65_3195 004f19b91dbd6145da5f19a333fc92f2 102 Pfam PF07214 Protein of unknown function (DUF1418) 1 92 5.2E-36 T 14-10-2018 IPR010815 Protein of unknown function DUF1418 BD65_1717 6cf56a78bff6cedc7149779bcc4ac2d3 421 Pfam PF02447 GntP family permease 8 414 7.7E-26 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BD65_2728 88f9ca6858fbd7210e5d4d31f1a99aed 255 Pfam PF04338 Protein of unknown function, DUF481 50 254 1.2E-57 T 14-10-2018 IPR007433 Protein of unknown function DUF481 BD65_1448 a1a014a48ad991af645c3ab3ceb17f33 174 Pfam PF12915 Protein of unknown function (DUF3833) 12 172 2.4E-65 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 BD65_1888 043622eb27a648009d5f1a73b473999c 91 ProDom PD029230 GPA 5'REGION GP83 ORF83 GENE GP45 BACTERIOPHAGE SIMILAR ORF4 2 77 4.0E-24 T 14-10-2018 IPR020284 Protein of unknown function CP83 BD65_1888 043622eb27a648009d5f1a73b473999c 91 Pfam PF17399 Domain of unknown function (DUF5405) 6 89 4.1E-22 T 14-10-2018 IPR035404 Domain of unknown function DUF5405 BD65_1565 4b0d770ba93917dd577e351f3e767bfe 141 Pfam PF03788 LrgA family 30 122 4.0E-26 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 BD65_196 7968307f6cee86bcaa86be1d44e9bbab 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 BD65_196 7968307f6cee86bcaa86be1d44e9bbab 114 SUPERFAMILY SSF55298 2 113 1.73E-26 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BD65_196 7968307f6cee86bcaa86be1d44e9bbab 114 Pfam PF01042 Endoribonuclease L-PSP 4 113 2.4E-25 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BD65_196 7968307f6cee86bcaa86be1d44e9bbab 114 Gene3D G3DSA:3.30.1330.40 1 114 1.3E-33 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BD65_1832 37936af373a0793c2d088e0b2e06d555 233 Gene3D G3DSA:1.10.510.10 30 107 8.1E-7 T 14-10-2018 BD65_1832 37936af373a0793c2d088e0b2e06d555 233 SUPERFAMILY SSF56112 21 194 9.84E-8 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BD65_586 364f72b66a8c15077053428a69c308ae 104 Pfam PF10765 Protein of unknown function (DUF2591) 30 97 9.1E-13 T 14-10-2018 IPR019701 Bacteriophage P22, NinX BD65_2439 d40f0cf27e6cb0dcab2c2ed554c9fb56 256 Pfam PF03609 PTS system sorbose-specific iic component 3 232 1.5E-68 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 BD65_3196 15edd32745db07efc5fa264f5c8e6631 161 Pfam PF10722 Putative bacterial sensory transduction regulator 9 130 1.2E-14 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN BD65_1691 5f3272a6479ddf887fc36fb7a2ecb84c 176 Pfam PF09335 SNARE associated Golgi protein 41 164 3.4E-13 T 14-10-2018 IPR032816 SNARE associated Golgi protein BD65_1356 5c6f7d1511a34b67203309f83c5e7bab 273 Pfam PF08666 SAF domain 47 108 3.1E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BD65_2935 d4cca90cff5fc389ab6c0717619a5244 179 Pfam PF01292 Prokaryotic cytochrome b561 6 177 1.2E-21 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BD65_2935 d4cca90cff5fc389ab6c0717619a5244 179 SUPERFAMILY SSF81342 4 178 9.42E-26 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BD65_2366 5973526942378226eb239266a20ad543 331 Pfam PF01136 Peptidase family U32 76 330 1.2E-65 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BD65_2366 5973526942378226eb239266a20ad543 331 SUPERFAMILY SSF51391 11 161 1.83E-5 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BD65_2366 5973526942378226eb239266a20ad543 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BD65_265 4b431ab9f7d7ac8af0bad120c7686846 160 Pfam PF15941 FidL-like putative membrane protein 70 155 3.0E-14 T 14-10-2018 IPR031854 Putative membrane protein FidL-like BD65_903 898907526932fe96090adf72031503e0 426 Gene3D G3DSA:2.40.160.60 26 426 1.9E-139 T 14-10-2018 BD65_903 898907526932fe96090adf72031503e0 426 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 426 9.9E-138 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BD65_903 898907526932fe96090adf72031503e0 426 SUPERFAMILY SSF56935 26 426 3.66E-103 T 14-10-2018 BD65_1317 72a49dbcd38df69bd58398a692cd6d12 239 Pfam PF11101 Protein of unknown function (DUF2884) 23 238 8.3E-45 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 BD65_2776 c5d7be2a4ed4e535e9c43dfefa910bcd 155 SUPERFAMILY SSF55729 2 147 4.36E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BD65_2776 c5d7be2a4ed4e535e9c43dfefa910bcd 155 Gene3D G3DSA:3.40.630.30 2 152 1.3E-31 T 14-10-2018 BD65_2776 c5d7be2a4ed4e535e9c43dfefa910bcd 155 Pfam PF00583 Acetyltransferase (GNAT) family 56 141 2.7E-13 T 14-10-2018 IPR000182 GNAT domain BD65_1137 e6d235c6c1bf128774431b7e4868e755 150 Hamap MF_00546 Acid shock protein [asr]. 1 146 15.449 T 14-10-2018 IPR023497 Acid shock protein BD65_2410 11cb7125850300a352d71989dcdc6d38 88 SUPERFAMILY SSF46689 1 73 1.51E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BD65_2410 11cb7125850300a352d71989dcdc6d38 88 Pfam PF01527 Transposase 2 71 3.3E-21 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BD65_1473 90d419d5f4588bf4521165a3cbce4ea7 123 Pfam PF06476 Protein of unknown function (DUF1090) 15 119 3.0E-38 T 14-10-2018 IPR009468 Protein of unknown function DUF1090 BD65_1604 15e3c543b5e050a22d6d58023d536cb2 318 SUPERFAMILY SSF88874 134 318 3.14E-15 T 14-10-2018 BD65_2859 85500e03785cb16f68422cac41f04d74 178 Pfam PF07445 Primosomal replication protein priC 9 175 6.7E-55 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC BD65_2859 85500e03785cb16f68422cac41f04d74 178 Gene3D G3DSA:1.20.1270.340 1 98 6.6E-36 T 14-10-2018 IPR038338 PriB/PriC superfamily BD65_2659 c952f07e89d4c476a21bf4ecd5a99018 222 ProDom PD038222 INVASION PLASMID OXYGEN-REGULATED III SECRETION MXIN TYPE SYSTEM PATHWAY ORGB 37 189 9.0E-14 T 14-10-2018 BD65_1704 2b78ecd4bdf4558b5b53f5beba6765ad 222 Pfam PF04449 CS1 type fimbrial major subunit 64 200 6.4E-8 T 14-10-2018 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 BD65_2782 094a82fd0ef29c0e358b37b0ee635c3c 522 Pfam PF03169 OPT oligopeptide transporter protein 238 517 3.3E-14 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 BD65_2782 094a82fd0ef29c0e358b37b0ee635c3c 522 Pfam PF03169 OPT oligopeptide transporter protein 15 225 3.7E-10 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 BD65_1253 19ba1b517279f0c250b0fc6efe930bea 186 Gene3D G3DSA:2.30.30.830 123 183 5.8E-6 T 14-10-2018 BD65_893 12c9328493371030f1ed4fb6d79b65ee 185 Pfam PF04315 Elongation factor P hydroxylase 16 178 6.5E-79 T 14-10-2018 IPR007411 Elongation factor P hydroxylase BD65_1135 496a7630cba4864dc3ca26c3c810446c 149 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 149 9.0E-60 T 14-10-2018 IPR009587 Protein of unknown function DUF1198 BD65_1135 496a7630cba4864dc3ca26c3c810446c 149 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 8.3E-64 T 14-10-2018 IPR009587 Protein of unknown function DUF1198 BD65_1601 575e349c5bcde6e95392b0efadd2b7c9 293 Pfam PF14065 Protein of unknown function (DUF4255) 10 181 4.8E-28 T 14-10-2018 IPR025351 Protein of unknown function DUF4255 BD65_860 1c3abdecf56abb269f6e66767cdeeba5 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 1.9E-147 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 BD65_2519 dff5ecd9c29b97d8f81d4abed63898e4 156 Pfam PF12582 Protein of unknown function (DUF3757) 23 145 1.9E-16 T 14-10-2018 IPR022231 Protein of unknown function DUF3757 BD65_2418 c38d520252ad5c83d6e34da59acef502 196 Pfam PF14487 Domain of unknown function (DUF4433) 11 188 1.6E-21 T 14-10-2018 IPR029494 Domain of unknown function DUF4433 BD65_541 34f7d5f042daba20e9bd774ac5036d5f 294 Pfam PF05425 Copper resistance protein D 189 287 6.4E-20 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 BD65_1412 bd07bf088484a1b3dbc4db2f4ab6be30 155 ProDom PD034160 PRECURSOR SIGNAL YFJT INTERGENIC-REGION C0283 YKFB 1 152 7.0E-38 T 14-10-2018 BD65_1707 8c455217a2c969148232e0fc5370a33a 223 Gene3D G3DSA:2.60.40.10 29 151 1.3E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold BD65_420 474277cda116afb7358add85c0afe226 196 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 6.8E-47 T 14-10-2018 IPR009698 Protein of unknown function DUF1282 BD65_1727 ca5921f671993809ac5bb90ee14c69dc 208 Pfam PF07947 YhhN family 26 206 1.4E-42 T 14-10-2018 IPR012506 YhhN-like GO:0016021 BD65_2676 899cd4f732a1142f4fd6cd00fb7acba6 264 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 15 260 1.7E-73 T 14-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 BD65_2676 899cd4f732a1142f4fd6cd00fb7acba6 264 Pfam PF01311 Bacterial export proteins, family 1 21 242 6.1E-43 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BD65_2676 899cd4f732a1142f4fd6cd00fb7acba6 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 29 50 5.9E-23 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BD65_2676 899cd4f732a1142f4fd6cd00fb7acba6 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 187 209 5.9E-23 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BD65_2676 899cd4f732a1142f4fd6cd00fb7acba6 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 88 107 5.9E-23 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BD65_2676 899cd4f732a1142f4fd6cd00fb7acba6 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 209 228 5.9E-23 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BD65_2316 79f69a07a00d266f853ce11e934831fc 248 Pfam PF04225 Opacity-associated protein A LysM-like domain 163 247 4.7E-37 T 14-10-2018 IPR007340 Opacity-associated protein A BD65_2316 79f69a07a00d266f853ce11e934831fc 248 Pfam PF08525 Opacity-associated protein A N-terminal motif 94 121 3.3E-10 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal BD65_2316 79f69a07a00d266f853ce11e934831fc 248 Gene3D G3DSA:3.10.450.350 154 246 3.7E-13 T 14-10-2018 BD65_1934 fcdcfbcfabb9f9900343afe4bbe8fdfb 221 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 3 183 2.9E-51 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BD65_1883 0023d0015120eaea5800434d0fc4ace5 234 Gene3D G3DSA:3.30.70.2330 138 230 5.2E-9 T 14-10-2018 BD65_1857 fc7ca8b542bf67996e11b449d637f5f5 72 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 2.6E-21 T 14-10-2018 IPR007684 Zinc finger, Ogr/Delta-type BD65_1713 8fb261a8dfd15969b8ba6db72e702a65 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 8.0E-64 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BD65_854 d1fdcf1a3023a75798d8f56ce13bd6b2 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 35.531 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 BD65_854 d1fdcf1a3023a75798d8f56ce13bd6b2 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 1.1E-58 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 BD65_3188 25aa0cf99acc024ea15bf41b8bdfeca1 430 TIGRFAM TIGR00814 stp: serine transporter 20 419 2.5E-177 T 14-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 BD65_1474 0bd9508dc8520bb39b89d0f1ba988d4f 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 1.6E-32 T 14-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 BD65_1474 0bd9508dc8520bb39b89d0f1ba988d4f 101 Gene3D G3DSA:1.20.120.20 2 79 1.2E-5 T 14-10-2018 BD65_1428 a5b7b1e42ddb1d9af918e892bc2d312f 208 Pfam PF11726 Inovirus Gp2 19 204 1.1E-57 T 14-10-2018 BD65_2236 e175d8d225ea45f324597a5b9a531cca 68 Pfam PF03889 Domain of unknown function 9 45 1.6E-20 T 14-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 BD65_2722 9b99f26369374b121b1c15642d203e7e 263 Pfam PF01578 Cytochrome C assembly protein 37 260 7.7E-42 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BD65_417 6170eac8559fc2fb510d5dcdc3baa702 101 Pfam PF13591 MerR HTH family regulatory protein 9 91 2.7E-23 T 14-10-2018 BD65_417 6170eac8559fc2fb510d5dcdc3baa702 101 Gene3D G3DSA:1.10.1660.10 1 100 1.2E-27 T 14-10-2018 BD65_2138 b68a3e4b78cfda3ad4aa81a522ce6a10 326 Gene3D G3DSA:1.20.910.10 91 309 1.9E-14 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BD65_2683 743d7dc54247ca700926ecbb2446f237 94 Pfam PF00550 Phosphopantetheine attachment site 37 87 7.3E-5 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BD65_2683 743d7dc54247ca700926ecbb2446f237 94 SUPERFAMILY SSF47336 33 87 3.53E-9 T 14-10-2018 IPR036736 ACP-like superfamily BD65_2683 743d7dc54247ca700926ecbb2446f237 94 Gene3D G3DSA:1.10.1200.10 24 91 1.0E-9 T 14-10-2018 IPR036736 ACP-like superfamily BD65_73 209a7a24b7c86a2d740d25416f5dd2f8 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.5E-10 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 BD65_52 1ca801de83386b8e88ab432c5ee9cd2f 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 4.5E-16 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BD65_2500 2f5ca3dec4fe72e9cc7474300fad67bd 188 Pfam PF01184 GPR1/FUN34/yaaH family 3 181 1.9E-44 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 BD65_1564 459302efd1591737f458d3384ebce661 229 Pfam PF04172 LrgB-like family 14 224 1.2E-68 T 14-10-2018 IPR007300 CidB/LrgB family BD65_928 e923237f9f434e98b197ce71b4d63d62 120 Pfam PF10697 Protein of unknown function (DUF2502) 24 111 2.3E-31 T 14-10-2018 IPR019638 Protein of unknown function DUF2502 BD65_1406 16aa70357b660720789d383ed430fef8 73 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 61 2.0E-6 T 14-10-2018 BD65_1476 95843fed88409847f0d4430f3051d59a 94 Pfam PF13997 YqjK-like protein 13 85 3.4E-30 T 14-10-2018 IPR025612 YqjK-like protein BD65_2680 57a7a517a26bd5055eb0e294de13ae73 475 Pfam PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) 223 446 5.6E-6 T 14-10-2018 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 BD65_343 78023938bcf04acd21eca9d0dd39ec12 368 Pfam PF03421 YopJ Serine/Threonine acetyltransferase 99 260 3.3E-12 T 14-10-2018 IPR005083 Serine/Threonine acetyltransferase, YopJ BD65_3087 f400db646532c6c70ed22ef59bcc06c4 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 232 9.6E-62 T 14-10-2018 IPR006214 Bax inhibitor 1-related BD65_1976 6cb7255ebf38101be4b0acd113506e74 223 Pfam PF07077 Protein of unknown function (DUF1345) 39 213 7.7E-53 T 14-10-2018 IPR009781 Protein of unknown function DUF1345 BD65_1886 a99c4a90bccf4d4822ff09d3e0763137 754 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 138 468 1.9E-100 T 14-10-2018 IPR008766 Replication gene A protein GO:0006260 BD65_1364 682cd8c532321d17fd648359b1f7559d 162 Pfam PF07811 TadE-like protein 14 55 9.6E-6 T 14-10-2018 IPR012495 TadE-like BD65_262 86aeb6f85ffc0cd6e9226b2b6eb5c5a5 89 Pfam PF13453 Transcription factor zinc-finger 2 42 1.2E-20 T 14-10-2018 IPR027392 Transcription factor zinc-finger BD65_2424 dfb4e6ce8ed803ac178cc2ddfba26e5c 131 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 7 55 7.1E-7 T 14-10-2018 IPR025159 Transcriptional regulator, AbiEi antitoxin BD65_350 5d800169965e9285ed059c38a88531e0 272 SUPERFAMILY SSF56925 73 269 6.02E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BD65_1122 ccee12450554cc5e30c8b7e91b7ac377 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 1.0E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BD65_3061 90665bb8ed063845e419dd0eaa56266a 272 Pfam PF02517 CAAX protease self-immunity 173 259 4.0E-19 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BD65_2398 d815348432f9d6a77ad09282e0565683 442 TIGRFAM TIGR03236 dnd_assoc_1: DNA phosphorothioation-dependent restriction protein DptG 79 442 9.8E-91 T 14-10-2018 IPR017645 DNA phosphorothioation-dependent restriction protein DptG