locus-tag class description BF17_00030 PF02357 Transcription termination factor nusG BF17_00040 PF02387 IncFII RepA protein family BF17_00070 PF00239 Resolvase, N terminal domain BF17_00070 PF02796 Helix-turn-helix domain of resolvase BF17_00095 PF13614 AAA domain BF17_00150 PF15723 Motility quorum-sensing regulator, toxin of MqsA BF17_00155 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA BF17_00160 PF03230 Antirestriction protein BF17_00210 PF13091 PLD-like domain BF17_00300 PF13362 Toprim domain BF17_00300 PF18818 Metallopeptidase superfamily domain BF17_00300 PF08401 Domain of unknown function (DUF1738) BF17_00310 PF00437 Type II/IV secretion system protein BF17_00325 PF04917 Bacterial shufflon protein, N-terminal constant region BF17_00335 PF01464 Transglycosylase SLT domain BF17_00350 PF00437 Type II/IV secretion system protein BF17_00385 PF00005 ABC transporter BF17_00390 PF00528 Binding-protein-dependent transport system inner membrane component BF17_00395 PF00528 Binding-protein-dependent transport system inner membrane component BF17_00400 PF02503 Polyphosphate kinase middle domain BF17_00400 PF17941 Polyphosphate kinase C-terminal domain 1 BF17_00400 PF13090 Polyphosphate kinase C-terminal domain 2 BF17_00400 PF13089 Polyphosphate kinase N-terminal domain BF17_00405 PF02541 Ppx/GppA phosphatase family BF17_00415 PF00571 CBS domain BF17_00415 PF03448 MgtE intracellular N domain BF17_00415 PF01769 Divalent cation transporter BF17_00420 PF00012 Hsp70 protein BF17_00425 PF13533 Biotin-lipoyl like BF17_00430 PF00873 AcrB/AcrD/AcrF family BF17_00435 PF00873 AcrB/AcrD/AcrF family BF17_00440 PF07690 Major Facilitator Superfamily BF17_00445 PF00672 HAMP domain BF17_00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_00445 PF00512 His Kinase A (phospho-acceptor) domain BF17_00450 PF00486 Transcriptional regulatory protein, C terminal BF17_00450 PF00072 Response regulator receiver domain BF17_00455 PF07411 Domain of unknown function (DUF1508) BF17_00470 PF00781 Diacylglycerol kinase catalytic domain BF17_00485 PF08543 Phosphomethylpyrimidine kinase BF17_00525 PF05638 Type VI secretion system effector, Hcp BF17_00545 PF00478 IMP dehydrogenase / GMP reductase domain BF17_00545 PF00571 CBS domain BF17_00550 PF13742 OB-fold nucleic acid binding domain BF17_00550 PF02601 Exonuclease VII, large subunit BF17_00560 PF01926 50S ribosome-binding GTPase BF17_00560 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BF17_00565 PF13360 PQQ-like domain BF17_00570 PF09976 Tetratricopeptide repeat-like domain BF17_00575 PF03129 Anticodon binding domain BF17_00575 PF13393 Histidyl-tRNA synthetase BF17_00585 PF04551 GcpE protein BF17_00590 PF13464 Domain of unknown function (DUF4115) BF17_00600 PF04055 Radical SAM superfamily BF17_00605 PF00334 Nucleoside diphosphate kinase BF17_00610 PF00030 Beta/Gamma crystallin BF17_00620 PF16168 Adhesin of bacterial autotransporter system, probable stalk BF17_00620 PF03212 Pertactin BF17_00620 PF03797 Autotransporter beta-domain BF17_00625 PF03212 Pertactin BF17_00625 PF03797 Autotransporter beta-domain BF17_00625 PF16168 Adhesin of bacterial autotransporter system, probable stalk BF17_00630 PF14581 SseB protein C-terminal domain BF17_00630 PF07179 SseB protein N-terminal domain BF17_00635 PF12404 Peptidase BF17_00635 PF00883 Cytosol aminopeptidase family, catalytic domain BF17_00640 PF04384 Iron-sulphur cluster assembly BF17_00645 PF00111 2Fe-2S iron-sulfur cluster binding domain BF17_00650 PF00012 Hsp70 protein BF17_00655 PF00226 DnaJ domain BF17_00655 PF07743 HSCB C-terminal oligomerisation domain BF17_00660 PF01521 Iron-sulphur cluster biosynthesis BF17_00665 PF01592 NifU-like N terminal domain BF17_00670 PF00266 Aminotransferase class-V BF17_00675 PF02082 Transcriptional regulator BF17_00680 PF00588 SpoU rRNA Methylase family BF17_00685 PF00459 Inositol monophosphatase family BF17_00690 PF03824 High-affinity nickel-transport protein BF17_00695 PF06226 Protein of unknown function (DUF1007) BF17_00700 PF00874 PRD domain BF17_00705 PF12832 MFS_1 like family BF17_00710 PF13505 Outer membrane protein beta-barrel domain BF17_00715 PF00464 Serine hydroxymethyltransferase BF17_00725 PF00175 Oxidoreductase NAD-binding domain BF17_00725 PF00042 Globin BF17_00725 PF00970 Oxidoreductase FAD-binding domain BF17_00735 PF14503 YhfZ C-terminal domain BF17_00735 PF14502 Helix-turn-helix domain BF17_00740 PF00543 Nitrogen regulatory protein P-II BF17_00745 PF02540 NAD synthase BF17_00745 PF00795 Carbon-nitrogen hydrolase BF17_00760 PF13942 YfhG lipoprotein BF17_00765 PF00512 His Kinase A (phospho-acceptor) domain BF17_00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_00785 PF02769 AIR synthase related protein, C-terminal domain BF17_00785 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BF17_00785 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BF17_00790 PF01464 Transglycosylase SLT domain BF17_00790 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF17_00795 PF14437 MafB19-like deaminase BF17_00805 PF01380 SIS domain BF17_00810 PF01418 Helix-turn-helix domain, rpiR family BF17_00810 PF01380 SIS domain BF17_00815 PF12838 4Fe-4S dicluster domain BF17_00820 PF01648 4'-phosphopantetheinyl transferase superfamily BF17_00825 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BF17_00830 PF02565 Recombination protein O C terminal BF17_00830 PF11967 Recombination protein O N terminal BF17_00835 PF07650 KH domain BF17_00835 PF01926 50S ribosome-binding GTPase BF17_00840 PF00035 Double-stranded RNA binding motif BF17_00840 PF14622 Ribonuclease-III-like BF17_00845 PF10502 Signal peptidase, peptidase S26 BF17_00850 PF03144 Elongation factor Tu domain 2 BF17_00850 PF00009 Elongation factor Tu GTP binding domain BF17_00850 PF00679 Elongation factor G C-terminus BF17_00850 PF06421 GTP-binding protein LepA C-terminus BF17_00865 PF03888 MucB/RseB N-terminal domain BF17_00865 PF17188 MucB/RseB C-terminal domain BF17_00870 PF03872 Anti sigma-E protein RseA, N-terminal domain BF17_00870 PF03873 Anti sigma-E protein RseA, C-terminal domain BF17_00875 PF04542 Sigma-70 region 2 BF17_00875 PF08281 Sigma-70, region 4 BF17_00880 PF00890 FAD binding domain BF17_00880 PF02910 Fumarate reductase flavoprotein C-term BF17_00885 PF05175 Methyltransferase small domain BF17_00890 PF00271 Helicase conserved C-terminal domain BF17_00890 PF00270 DEAD/DEAH box helicase BF17_00895 PF12796 Ankyrin repeats (3 copies) BF17_00905 PF01228 Glycine radical BF17_00910 PF03167 Uracil DNA glycosylase superfamily BF17_00915 PF01470 Pyroglutamyl peptidase BF17_00930 PF03746 LamB/YcsF family BF17_00935 PF02626 Carboxyltransferase domain, subdomain A and B BF17_00940 PF02682 Carboxyltransferase domain, subdomain C and D BF17_00945 PF01784 NIF3 (NGG1p interacting factor 3) BF17_00950 PF02112 cAMP phosphodiesterases class-II BF17_00955 PF00875 DNA photolyase BF17_00955 PF03441 FAD binding domain of DNA photolyase BF17_00960 PF08349 Protein of unknown function (DUF1722) BF17_00965 PF10725 Protein of unknown function (DUF2517) BF17_00975 PF03814 Potassium-transporting ATPase A subunit BF17_00990 PF02669 K+-transporting ATPase, c chain BF17_00995 PF02702 Osmosensitive K+ channel His kinase sensor domain BF17_00995 PF00512 His Kinase A (phospho-acceptor) domain BF17_00995 PF13493 Domain of unknown function (DUF4118) BF17_00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_00995 PF13492 GAF domain BF17_01010 PF00486 Transcriptional regulatory protein, C terminal BF17_01010 PF00072 Response regulator receiver domain BF17_01040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF17_01040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF17_01040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF17_01040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF17_01045 PF03925 SeqA protein C-terminal domain BF17_01045 PF17206 SeqA protein N-terminal domain BF17_01060 PF04794 YdjC-like protein BF17_01065 PF07883 Cupin domain BF17_01065 PF12833 Helix-turn-helix domain BF17_01070 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF17_01075 PF02378 Phosphotransferase system, EIIC BF17_01080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF17_01105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF17_01110 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF17_01115 PF07885 Ion channel BF17_01115 PF02254 TrkA-N domain BF17_01120 PF06411 HdeA/HdeB family BF17_01125 PF03824 High-affinity nickel-transport protein BF17_01130 PF03253 Urea transporter BF17_01135 PF01774 UreD urease accessory protein BF17_01140 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF17_01145 PF01730 UreF BF17_01150 PF02814 UreE urease accessory protein, N-terminal domain BF17_01150 PF05194 UreE urease accessory protein, C-terminal domain BF17_01155 PF01979 Amidohydrolase family BF17_01155 PF00449 Urease alpha-subunit, N-terminal domain BF17_01160 PF00699 Urease beta subunit BF17_01165 PF00547 Urease, gamma subunit BF17_01170 PF00005 ABC transporter BF17_01175 PF00005 ABC transporter BF17_01180 PF00528 Binding-protein-dependent transport system inner membrane component BF17_01180 PF12911 N-terminal TM domain of oligopeptide transport permease C BF17_01185 PF00528 Binding-protein-dependent transport system inner membrane component BF17_01190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF17_01195 PF00313 'Cold-shock' DNA-binding domain BF17_01205 PF06711 Protein of unknown function (DUF1198) BF17_01210 PF09400 Protein of unknown function (DUF2002) BF17_01215 PF06392 Acid shock protein repeat BF17_01225 PF07972 NrdI Flavodoxin like BF17_01230 PF08343 Ribonucleotide reductase N-terminal BF17_01230 PF00317 Ribonucleotide reductase, all-alpha domain BF17_01230 PF02867 Ribonucleotide reductase, barrel domain BF17_01235 PF00268 Ribonucleotide reductase, small chain BF17_01240 PF00571 CBS domain BF17_01240 PF00005 ABC transporter BF17_01245 PF00528 Binding-protein-dependent transport system inner membrane component BF17_01250 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BF17_01260 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BF17_01270 PF00929 Exonuclease BF17_01275 PF00075 RNase H BF17_01280 PF08241 Methyltransferase domain BF17_01285 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF17_01285 PF00753 Metallo-beta-lactamase superfamily BF17_01290 PF01464 Transglycosylase SLT domain BF17_01290 PF01476 LysM domain BF17_01295 PF03372 Endonuclease/Exonuclease/phosphatase family BF17_01305 PF00248 Aldo/keto reductase family BF17_01345 PF09383 NIL domain BF17_01345 PF00005 ABC transporter BF17_01350 PF00528 Binding-protein-dependent transport system inner membrane component BF17_01355 PF03180 NLPA lipoprotein BF17_01360 PF16358 RcsF lipoprotein BF17_01365 PF01980 tRNA-methyltransferase O BF17_01365 PF18389 TrmO C-terminal domain BF17_01370 PF03129 Anticodon binding domain BF17_01370 PF04073 Aminoacyl-tRNA editing domain BF17_01370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF17_01375 PF17185 NlpE C-terminal OB domain BF17_01375 PF04170 NlpE N-terminal domain BF17_01380 PF00472 RF-1 domain BF17_01390 PF06786 Uncharacterised protein family (UPF0253) BF17_01395 PF07073 Modulator of Rho-dependent transcription termination (ROF) BF17_01400 PF00034 Cytochrome c BF17_01405 PF01171 PP-loop family BF17_01405 PF09179 TilS substrate binding domain BF17_01405 PF11734 TilS substrate C-terminal domain BF17_01410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF17_01415 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BF17_01420 PF14579 Helix-hairpin-helix motif BF17_01420 PF02811 PHP domain BF17_01420 PF01336 OB-fold nucleic acid binding domain BF17_01420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF17_01420 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF17_01425 PF01351 Ribonuclease HII BF17_01430 PF02684 Lipid-A-disaccharide synthetase BF17_01435 PF00132 Bacterial transferase hexapeptide (six repeats) BF17_01435 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BF17_01440 PF07977 FabA-like domain BF17_01445 PF00132 Bacterial transferase hexapeptide (six repeats) BF17_01445 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BF17_01450 PF03938 Outer membrane protein (OmpH-like) BF17_01455 PF01103 Surface antigen BF17_01455 PF07244 Surface antigen variable number repeat BF17_01460 PF17820 PDZ domain BF17_01460 PF02163 Peptidase family M50 BF17_01470 PF01255 Putative undecaprenyl diphosphate synthase BF17_01475 PF13288 DXP reductoisomerase C-terminal domain BF17_01475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF17_01475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF17_01480 PF01765 Ribosome recycling factor BF17_01485 PF00696 Amino acid kinase family BF17_01490 PF00889 Elongation factor TS BF17_01495 PF00318 Ribosomal protein S2 BF17_01500 PF00557 Metallopeptidase family M24 BF17_01505 PF08335 GlnD PII-uridylyltransferase BF17_01505 PF01966 HD domain BF17_01505 PF01909 Nucleotidyltransferase domain BF17_01505 PF01842 ACT domain BF17_01510 PF00132 Bacterial transferase hexapeptide (six repeats) BF17_01510 PF14602 Hexapeptide repeat of succinyl-transferase BF17_01510 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BF17_01515 PF11944 Protein of unknown function (DUF3461) BF17_01520 PF00258 Flavodoxin BF17_01525 PF00849 RNA pseudouridylate synthase BF17_01530 PF04287 tRNA pseudouridine synthase C BF17_01535 PF07348 Syd protein (SUKH-2) BF17_01540 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BF17_01540 PF14489 QueF-like protein BF17_01545 PF03641 Possible lysine decarboxylase BF17_01545 PF11892 Domain of unknown function (DUF3412) BF17_01545 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BF17_01550 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF17_01550 PF01367 5'-3' exonuclease, C-terminal SAM fold BF17_01560 PF01728 FtsJ-like methyltransferase BF17_01560 PF18125 RlmM ferredoxin-like domain BF17_01565 PF04241 Protein of unknown function (DUF423) BF17_01570 PF03466 LysR substrate binding domain BF17_01570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_01575 PF00266 Aminotransferase class-V BF17_01580 PF02657 Fe-S metabolism associated domain BF17_01585 PF00899 ThiF family BF17_01590 PF06725 3D domain BF17_01590 PF03562 MltA specific insert domain BF17_01610 PF11741 AMIN domain BF17_01610 PF01520 N-acetylmuramoyl-L-alanine amidase BF17_01615 PF00583 Acetyltransferase (GNAT) family BF17_01615 PF00696 Amino acid kinase family BF17_01620 PF13538 UvrD-like helicase C-terminal domain BF17_01625 PF13361 UvrD-like helicase C-terminal domain BF17_01625 PF00580 UvrD/REP helicase N-terminal domain BF17_01625 PF12705 PD-(D/E)XK nuclease superfamily BF17_01630 PF16187 Middle or third domain of peptidase_M16 BF17_01630 PF00675 Insulinase (Peptidase family M16) BF17_01630 PF05193 Peptidase M16 inactive domain BF17_01635 PF17946 RecC C-terminal domain BF17_01660 PF00303 Thymidylate synthase BF17_01665 PF01790 Prolipoprotein diacylglyceryl transferase BF17_01670 PF02896 PEP-utilising enzyme, TIM barrel domain BF17_01670 PF01590 GAF domain BF17_01670 PF00391 PEP-utilising enzyme, mobile domain BF17_01670 PF05524 PEP-utilising enzyme, N-terminal BF17_01675 PF00293 NUDIX domain BF17_01680 PF02976 DNA mismatch repair enzyme MutH BF17_01685 PF00248 Aldo/keto reductase family BF17_01700 PF07690 Major Facilitator Superfamily BF17_01705 PF01553 Acyltransferase BF17_01705 PF00501 AMP-binding enzyme BF17_01705 PF13193 AMP-binding enzyme C-terminal domain BF17_01715 PF00356 Bacterial regulatory proteins, lacI family BF17_01720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BF17_01720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BF17_01725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_01725 PF03466 LysR substrate binding domain BF17_01730 PF07690 Major Facilitator Superfamily BF17_01770 PF01478 Type IV leader peptidase family BF17_01770 PF06750 Bacterial Peptidase A24 N-terminal domain BF17_01790 PF07963 Prokaryotic N-terminal methylation motif BF17_01790 PF11612 Type II secretion system (T2SS), protein J BF17_01805 PF07963 Prokaryotic N-terminal methylation motif BF17_01805 PF08334 Type II secretion system (T2SS), protein G BF17_01810 PF00482 Type II secretion system (T2SS), protein F BF17_01820 PF00263 Bacterial type II and III secretion system protein BF17_01820 PF03958 Bacterial type II/III secretion system short domain BF17_01835 PF00484 Carbonic anhydrase BF17_01850 PF02278 Polysaccharide lyase family 8, super-sandwich domain BF17_01850 PF09092 Lyase, N terminal BF17_01850 PF09093 Lyase, catalytic BF17_01850 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain BF17_01860 PF00884 Sulfatase BF17_01870 PF00455 DeoR C terminal sensor domain BF17_01870 PF08220 DeoR-like helix-turn-helix domain BF17_01875 PF08013 Tagatose 6 phosphate kinase BF17_01880 PF01380 SIS domain BF17_01885 PF03830 PTS system sorbose subfamily IIB component BF17_01890 PF03609 PTS system sorbose-specific iic component BF17_01895 PF03613 PTS system mannose/fructose/sorbose family IID component BF17_01900 PF03610 PTS system fructose IIA component BF17_01905 PF01979 Amidohydrolase family BF17_01920 PF13186 Iron-sulfur cluster-binding domain BF17_01920 PF04055 Radical SAM superfamily BF17_01925 PF00884 Sulfatase BF17_01935 PF01116 Fructose-bisphosphate aldolase class-II BF17_01945 PF00356 Bacterial regulatory proteins, lacI family BF17_01950 PF07690 Major Facilitator Superfamily BF17_01955 PF13802 Galactose mutarotase-like BF17_01955 PF01055 Glycosyl hydrolases family 31 BF17_01955 PF17137 Domain of unknown function (DUF5110) BF17_01955 PF16338 Domain of unknown function (DUF4968) BF17_01960 PF00356 Bacterial regulatory proteins, lacI family BF17_01965 PF02264 LamB porin BF17_01970 PF02378 Phosphotransferase system, EIIC BF17_01970 PF00367 phosphotransferase system, EIIB BF17_01975 PF08533 Beta-galactosidase C-terminal domain BF17_01975 PF02449 Beta-galactosidase BF17_01975 PF08532 Beta-galactosidase trimerisation domain BF17_01980 PF07745 Glycosyl hydrolase family 53 BF17_01985 PF00528 Binding-protein-dependent transport system inner membrane component BF17_01990 PF00528 Binding-protein-dependent transport system inner membrane component BF17_01995 PF13416 Bacterial extracellular solute-binding protein BF17_02000 PF00005 ABC transporter BF17_02000 PF17912 MalK OB fold domain BF17_02005 PF00005 ABC transporter BF17_02010 PF02653 Branched-chain amino acid transport system / permease component BF17_02015 PF13407 Periplasmic binding protein domain BF17_02025 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family BF17_02030 PF03551 Transcriptional regulator PadR-like family BF17_02105 PF05638 Type VI secretion system effector, Hcp BF17_02115 PF01336 OB-fold nucleic acid binding domain BF17_02115 PF00152 tRNA synthetases class II (D, K and N) BF17_02120 PF03462 PCRF domain BF17_02120 PF00472 RF-1 domain BF17_02125 PF01368 DHH family BF17_02125 PF02272 DHHA1 domain BF17_02125 PF17768 RecJ OB domain BF17_02130 PF13098 Thioredoxin-like domain BF17_02130 PF10411 Disulfide bond isomerase protein N-terminus BF17_02135 PF02899 Phage integrase, N-terminal SAM-like domain BF17_02135 PF00589 Phage integrase family BF17_02140 PF00258 Flavodoxin BF17_02155 PF00512 His Kinase A (phospho-acceptor) domain BF17_02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_02155 PF00672 HAMP domain BF17_02160 PF00072 Response regulator receiver domain BF17_02160 PF00486 Transcriptional regulatory protein, C terminal BF17_02165 PF07254 Membrane-bound toxin component of toxin-antitoxin system BF17_02170 PF03937 Flavinator of succinate dehydrogenase BF17_02185 PF03006 Haemolysin-III related BF17_02200 PF02347 Glycine cleavage system P-protein BF17_02205 PF01597 Glycine cleavage H-protein BF17_02210 PF08669 Glycine cleavage T-protein C-terminal barrel domain BF17_02210 PF01571 Aminomethyltransferase folate-binding domain BF17_02220 PF01494 FAD binding domain BF17_02225 PF01494 FAD binding domain BF17_02230 PF05195 Aminopeptidase P, N-terminal domain BF17_02230 PF00557 Metallopeptidase family M24 BF17_02235 PF03695 Uncharacterised protein family (UPF0149) BF17_02240 PF05164 Cell division protein ZapA BF17_02245 PF01812 5-formyltetrahydrofolate cyclo-ligase family BF17_02250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF17_02250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF17_02250 PF01842 ACT domain BF17_02255 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BF17_02260 PF03466 LysR substrate binding domain BF17_02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_02265 PF04402 Protein of unknown function (DUF541) BF17_02270 PF01810 LysE type translocator BF17_02275 PF05552 Conserved TM helix BF17_02275 PF00924 Mechanosensitive ion channel BF17_02280 PF01116 Fructose-bisphosphate aldolase class-II BF17_02285 PF00162 Phosphoglycerate kinase BF17_02290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF17_02290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF17_02295 PF02780 Transketolase, C-terminal domain BF17_02295 PF02779 Transketolase, pyrimidine binding domain BF17_02295 PF00456 Transketolase, thiamine diphosphate binding domain BF17_02300 PF01435 Peptidase family M48 BF17_02310 PF17810 Arginine decarboxylase helical bundle domain BF17_02310 PF17944 Arginine decarboxylase C-terminal helical extension BF17_02310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BF17_02315 PF00438 S-adenosylmethionine synthetase, N-terminal domain BF17_02315 PF02772 S-adenosylmethionine synthetase, central domain BF17_02315 PF02773 S-adenosylmethionine synthetase, C-terminal domain BF17_02320 PF17283 SprT-like zinc ribbon domain BF17_02320 PF10263 SprT-like family BF17_02325 PF04231 Endonuclease I BF17_02330 PF04452 RNA methyltransferase BF17_02335 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BF17_02335 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BF17_02340 PF02622 Uncharacterized ACR, COG1678 BF17_02345 PF03652 Holliday junction resolvase BF17_02350 PF00795 Carbon-nitrogen hydrolase BF17_02355 PF04371 Porphyromonas-type peptidyl-arginine deiminase BF17_02360 PF00437 Type II/IV secretion system protein BF17_02365 PF01168 Alanine racemase, N-terminal domain BF17_02370 PF03807 NADP oxidoreductase coenzyme F420-dependent BF17_02370 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF17_02375 PF02325 YGGT family BF17_02380 PF02594 Uncharacterised ACR, YggU family COG1872 BF17_02385 PF01725 Ham1 family BF17_02390 PF04055 Radical SAM superfamily BF17_02390 PF06969 HemN C-terminal domain BF17_02395 PF16671 Actin cross-linking domain BF17_02395 PF07634 RtxA repeat BF17_02395 PF11647 Membrane Localization Domain BF17_02395 PF12146 Serine aminopeptidase, S33 BF17_02395 PF11713 Peptidase C80 family BF17_02400 PF11101 Protein of unknown function (DUF2884) BF17_02405 PF04960 Glutaminase BF17_02410 PF04320 Protein with unknown function (DUF469) BF17_02415 PF02390 Putative methyltransferase BF17_02425 PF04362 Bacterial Fe(2+) trafficking BF17_02430 PF01464 Transglycosylase SLT domain BF17_02430 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BF17_02440 PF07715 TonB-dependent Receptor Plug Domain BF17_02445 PF02653 Branched-chain amino acid transport system / permease component BF17_02450 PF00005 ABC transporter BF17_02455 PF13407 Periplasmic binding protein domain BF17_02460 PF01276 Orn/Lys/Arg decarboxylase, major domain BF17_02460 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF17_02460 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BF17_02470 PF02899 Phage integrase, N-terminal SAM-like domain BF17_02470 PF00589 Phage integrase family BF17_02590 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF17_02685 PF05973 Phage derived protein Gp49-like (DUF891) BF17_02710 PF04754 Putative transposase, YhgA-like BF17_02715 PF04754 Putative transposase, YhgA-like BF17_02720 PF04917 Bacterial shufflon protein, N-terminal constant region BF17_02740 PF00437 Type II/IV secretion system protein BF17_02820 PF03796 DnaB-like helicase C terminal domain BF17_02820 PF00772 DnaB-like helicase N terminal domain BF17_02830 PF00589 Phage integrase family BF17_02830 PF02899 Phage integrase, N-terminal SAM-like domain BF17_02860 PF06755 CbtA_toxin of type IV toxin-antitoxin system BF17_02875 PF03230 Antirestriction protein BF17_02885 PF04754 Putative transposase, YhgA-like BF17_03000 PF12728 Helix-turn-helix domain BF17_03090 PF04972 BON domain BF17_03090 PF13629 Pilus formation protein N terminal region BF17_03090 PF00263 Bacterial type II and III secretion system protein BF17_03105 PF00437 Type II/IV secretion system protein BF17_03145 PF03737 Aldolase/RraA BF17_03160 PF13276 HTH-like domain BF17_03160 PF00665 Integrase core domain BF17_03160 PF13333 Integrase core domain BF17_03165 PF01527 Transposase BF17_03170 PF01474 Class-II DAHP synthetase family BF17_03180 PF00765 Autoinducer synthase BF17_03185 PF03472 Autoinducer binding domain BF17_03185 PF00196 Bacterial regulatory proteins, luxR family BF17_03200 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF17_03205 PF04055 Radical SAM superfamily BF17_03215 PF08220 DeoR-like helix-turn-helix domain BF17_03215 PF00455 DeoR C terminal sensor domain BF17_03230 PF01434 Peptidase family M41 BF17_03230 PF00004 ATPase family associated with various cellular activities (AAA) BF17_03230 PF17862 AAA+ lid domain BF17_03335 PF04183 IucA / IucC family BF17_03335 PF06276 Ferric iron reductase FhuF-like transporter BF17_03345 PF04183 IucA / IucC family BF17_03345 PF06276 Ferric iron reductase FhuF-like transporter BF17_03350 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BF17_03355 PF07715 TonB-dependent Receptor Plug Domain BF17_03355 PF00593 TonB dependent receptor BF17_03370 PF00356 Bacterial regulatory proteins, lacI family BF17_03375 PF00939 Sodium:sulfate symporter transmembrane region BF17_03395 PF05638 Type VI secretion system effector, Hcp BF17_03405 PF13592 Winged helix-turn helix BF17_03405 PF13358 DDE superfamily endonuclease BF17_03415 PF03527 RHS protein BF17_03415 PF05593 RHS Repeat BF17_03435 PF01381 Helix-turn-helix BF17_03465 PF05593 RHS Repeat BF17_03465 PF03527 RHS protein BF17_03475 PF05593 RHS Repeat BF17_03475 PF03527 RHS protein BF17_03485 PF04717 Type VI secretion system, phage-baseplate injector BF17_03490 PF12951 Passenger-associated-transport-repeat BF17_03495 PF13087 AAA domain BF17_03495 PF13086 AAA domain BF17_03495 PF13086 AAA domain BF17_03495 PF13087 AAA domain BF17_03495 PF13195 Protein of unknown function (DUF4011) BF17_03495 PF13195 Protein of unknown function (DUF4011) BF17_03500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF17_03500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF17_03505 PF00171 Aldehyde dehydrogenase family BF17_03510 PF01958 Domain of unknown function DUF108 BF17_03510 PF03447 Homoserine dehydrogenase, NAD binding domain BF17_03520 PF12697 Alpha/beta hydrolase family BF17_03530 PF07690 Major Facilitator Superfamily BF17_03535 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_03535 PF14759 Reductase C-terminal BF17_03545 PF09339 IclR helix-turn-helix domain BF17_03545 PF01614 Bacterial transcriptional regulator BF17_03555 PF00355 Rieske [2Fe-2S] domain BF17_03565 PF00355 Rieske [2Fe-2S] domain BF17_03570 PF02447 GntP family permease BF17_03585 PF00005 ABC transporter BF17_03585 PF00664 ABC transporter transmembrane region BF17_03590 PF04954 Siderophore-interacting protein BF17_03590 PF08021 Siderophore-interacting FAD-binding domain BF17_03590 PF00005 ABC transporter BF17_03590 PF00664 ABC transporter transmembrane region BF17_03600 PF00975 Thioesterase domain BF17_03615 PF00501 AMP-binding enzyme BF17_03615 PF08242 Methyltransferase domain BF17_03615 PF00550 Phosphopantetheine attachment site BF17_03615 PF00668 Condensation domain BF17_03620 PF00501 AMP-binding enzyme BF17_03620 PF13193 AMP-binding enzyme C-terminal domain BF17_03620 PF00668 Condensation domain BF17_03635 PF00593 TonB dependent receptor BF17_03635 PF07715 TonB-dependent Receptor Plug Domain BF17_03640 PF07687 Peptidase dimerisation domain BF17_03640 PF01546 Peptidase family M20/M25/M40 BF17_03645 PF03806 AbgT putative transporter family BF17_03655 PF12468 Type III secretion system leucine rich repeat protein BF17_03655 PF14496 C-terminal novel E3 ligase, LRR-interacting BF17_03660 PF14496 C-terminal novel E3 ligase, LRR-interacting BF17_03660 PF12468 Type III secretion system leucine rich repeat protein BF17_03660 PF14496 C-terminal novel E3 ligase, LRR-interacting BF17_03660 PF12468 Type III secretion system leucine rich repeat protein BF17_03670 PF03797 Autotransporter beta-domain BF17_03680 PF07906 ShET2 enterotoxin, N-terminal region BF17_03695 PF00873 AcrB/AcrD/AcrF family BF17_03700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BF17_03700 PF00529 HlyD membrane-fusion protein of T1SS BF17_03705 PF03707 Bacterial signalling protein N terminal repeat BF17_03705 PF00990 Diguanylate cyclase, GGDEF domain BF17_03705 PF00563 EAL domain BF17_03720 PF05433 Glycine zipper 2TM domain BF17_03740 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF17_03740 PF00691 OmpA family BF17_03745 PF01618 MotA/TolQ/ExbB proton channel family BF17_03750 PF04542 Sigma-70 region 2 BF17_03750 PF04545 Sigma-70, region 4 BF17_03775 PF07196 Flagellin hook IN motif BF17_03775 PF07195 Flagellar hook-associated protein 2 C-terminus BF17_03775 PF02465 Flagellar hook-associated protein 2 N-terminus BF17_03780 PF00700 Bacterial flagellin C-terminal helical region BF17_03780 PF07196 Flagellin hook IN motif BF17_03780 PF00669 Bacterial flagellin N-terminal helical region BF17_03785 PF00669 Bacterial flagellin N-terminal helical region BF17_03785 PF07196 Flagellin hook IN motif BF17_03785 PF00700 Bacterial flagellin C-terminal helical region BF17_03795 PF00700 Bacterial flagellin C-terminal helical region BF17_03795 PF07196 Flagellin hook IN motif BF17_03795 PF00669 Bacterial flagellin N-terminal helical region BF17_03800 PF18500 CadC C-terminal domain 1 BF17_03800 PF00486 Transcriptional regulatory protein, C terminal BF17_03820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF17_03820 PF00460 Flagella basal body rod protein BF17_03830 PF02119 Flagellar P-ring protein BF17_03835 PF02107 Flagellar L-ring protein BF17_03840 PF00460 Flagella basal body rod protein BF17_03840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF17_03845 PF00460 Flagella basal body rod protein BF17_03845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF17_03850 PF07559 Flagellar basal body protein FlaE BF17_03850 PF00460 Flagella basal body rod protein BF17_03850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF17_03855 PF03963 Flagellar hook capping protein - N-terminal region BF17_03855 PF13860 FlgD Ig-like domain BF17_03855 PF13861 FlgD Tudor-like domain BF17_03860 PF00460 Flagella basal body rod protein BF17_03860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF17_03865 PF00460 Flagella basal body rod protein BF17_03870 PF13144 Chaperone for flagella basal body P-ring formation BF17_03890 PF18269 T3SS EscN ATPase C-terminal domain BF17_03890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF17_03905 PF08345 Flagellar M-ring protein C-terminal BF17_03905 PF01514 Secretory protein of YscJ/FliF family BF17_03910 PF02049 Flagellar hook-basal body complex protein FliE BF17_03915 PF00158 Sigma-54 interaction domain BF17_03915 PF00072 Response regulator receiver domain BF17_03915 PF02954 Bacterial regulatory protein, Fis family BF17_03925 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF17_03930 PF00813 FliP family BF17_03935 PF01313 Bacterial export proteins, family 3 BF17_03940 PF01311 Bacterial export proteins, family 1 BF17_03945 PF01312 FlhB HrpN YscU SpaS Family BF17_03950 PF00771 FHIPEP family BF17_03965 PF01497 Periplasmic binding protein BF17_03970 PF09222 Fimbrial adhesin F17-AG, lectin domain BF17_03970 PF00419 Fimbrial protein BF17_03975 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_03975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_03980 PF00577 Outer membrane usher protein BF17_03980 PF13953 PapC C-terminal domain BF17_03980 PF13954 PapC N-terminal domain BF17_03985 PF00419 Fimbrial protein BF17_03990 PF00704 Glycosyl hydrolases family 18 BF17_03995 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF17_03995 PF18416 N-acetylglucosamine binding protein domain 2 BF17_04010 PF09134 Invasin, domain 3 BF17_04010 PF02369 Bacterial Ig-like domain (group 1) BF17_04010 PF11924 Inverse autotransporter, beta-domain BF17_04010 PF07979 Intimin C-type lectin domain BF17_04020 PF00873 AcrB/AcrD/AcrF family BF17_04045 PF04972 BON domain BF17_04045 PF13629 Pilus formation protein N terminal region BF17_04045 PF00263 Bacterial type II and III secretion system protein BF17_04060 PF00437 Type II/IV secretion system protein BF17_04095 PF02472 Biopolymer transport protein ExbD/TolR BF17_04100 PF01618 MotA/TolQ/ExbB proton channel family BF17_04105 PF01053 Cys/Met metabolism PLP-dependent enzyme BF17_04110 PF09335 SNARE associated Golgi protein BF17_04115 PF12833 Helix-turn-helix domain BF17_04115 PF06719 AraC-type transcriptional regulator N-terminus BF17_04125 PF00465 Iron-containing alcohol dehydrogenase BF17_04130 PF00248 Aldo/keto reductase family BF17_04135 PF08497 Radical SAM N-terminal BF17_04135 PF11842 Domain of unknown function (DUF3362) BF17_04135 PF04055 Radical SAM superfamily BF17_04145 PF07731 Multicopper oxidase BF17_04145 PF07732 Multicopper oxidase BF17_04155 PF00521 DNA gyrase/topoisomerase IV, subunit A BF17_04155 PF03989 DNA gyrase C-terminal domain, beta-propeller BF17_04165 PF02525 Flavodoxin-like fold BF17_04170 PF03466 LysR substrate binding domain BF17_04170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_04175 PF01751 Toprim domain BF17_04175 PF00204 DNA gyrase B BF17_04175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_04175 PF00986 DNA gyrase B subunit, carboxyl terminus BF17_04180 PF05728 Uncharacterised protein family (UPF0227) BF17_04185 PF00149 Calcineurin-like phosphoesterase BF17_04190 PF06853 Protein of unknown function (DUF1249) BF17_04195 PF00293 NUDIX domain BF17_04200 PF02321 Outer membrane efflux protein BF17_04210 PF06693 Protein of unknown function (DUF1190) BF17_04215 PF03738 Glutathionylspermidine synthase preATP-grasp BF17_04220 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BF17_04225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BF17_04235 PF04380 Membrane fusogenic activity BF17_04240 PF13520 Amino acid permease BF17_04245 PF00294 pfkB family carbohydrate kinase BF17_04245 PF01467 Cytidylyltransferase-like BF17_04250 PF08335 GlnD PII-uridylyltransferase BF17_04250 PF03710 Glutamate-ammonia ligase adenylyltransferase BF17_04255 PF01928 CYTH domain BF17_04260 PF08239 Bacterial SH3 domain BF17_04265 PF01966 HD domain BF17_04265 PF01743 Poly A polymerase head domain BF17_04265 PF12627 Probable RNA and SrmB- binding site of polymerase A BF17_04270 PF02673 Bacitracin resistance protein BacA BF17_04275 PF02152 Dihydroneopterin aldolase BF17_04280 PF02660 Glycerol-3-phosphate acyltransferase BF17_04290 PF00814 Glycoprotease family BF17_04295 PF01165 Ribosomal protein S21 BF17_04300 PF01807 CHC2 zinc finger BF17_04300 PF10410 DnaB-helicase binding domain of primase BF17_04300 PF08278 DNA primase DnaG DnaB-binding BF17_04300 PF08275 DNA primase catalytic core, N-terminal domain BF17_04305 PF04545 Sigma-70, region 4 BF17_04305 PF04542 Sigma-70 region 2 BF17_04305 PF00140 Sigma-70 factor, region 1.2 BF17_04305 PF03979 Sigma-70 factor, region 1.1 BF17_04305 PF04546 Sigma-70, non-essential region BF17_04305 PF04539 Sigma-70 region 3 BF17_04400 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A BF17_04405 PF06755 CbtA_toxin of type IV toxin-antitoxin system BF17_04415 PF03230 Antirestriction protein BF17_04420 PF06067 Domain of unknown function (DUF932) BF17_04420 PF06067 Domain of unknown function (DUF932) BF17_04440 PF08220 DeoR-like helix-turn-helix domain BF17_04440 PF13280 WYL domain BF17_04445 PF01926 50S ribosome-binding GTPase BF17_04480 PF07638 ECF sigma factor BF17_04510 PF02661 Fic/DOC family BF17_04560 PF00529 HlyD membrane-fusion protein of T1SS BF17_04560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BF17_04565 PF04632 Fusaric acid resistance protein family BF17_04575 PF00933 Glycosyl hydrolase family 3 N terminal domain BF17_04575 PF01915 Glycosyl hydrolase family 3 C-terminal domain BF17_04575 PF14310 Fibronectin type III-like domain BF17_04585 PF00528 Binding-protein-dependent transport system inner membrane component BF17_04590 PF00528 Binding-protein-dependent transport system inner membrane component BF17_04595 PF13416 Bacterial extracellular solute-binding protein BF17_04600 PF00356 Bacterial regulatory proteins, lacI family BF17_04605 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BF17_04610 PF00005 ABC transporter BF17_04610 PF17912 MalK OB fold domain BF17_04610 PF03459 TOBE domain BF17_04630 PF00391 PEP-utilising enzyme, mobile domain BF17_04630 PF02896 PEP-utilising enzyme, TIM barrel domain BF17_04630 PF00381 PTS HPr component phosphorylation site BF17_04630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF17_04630 PF05524 PEP-utilising enzyme, N-terminal BF17_04640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF17_04650 PF04055 Radical SAM superfamily BF17_04655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF17_04660 PF12833 Helix-turn-helix domain BF17_04670 PF04829 Pre-toxin domain with VENN motif BF17_04670 PF13018 Extended Signal Peptide of Type V secretion system BF17_04670 PF05860 haemagglutination activity domain BF17_04670 PF13332 Hemagglutinin repeat BF17_04710 PF13649 Methyltransferase domain BF17_04730 PF04829 Pre-toxin domain with VENN motif BF17_04730 PF13332 Hemagglutinin repeat BF17_04730 PF05860 haemagglutination activity domain BF17_04730 PF13018 Extended Signal Peptide of Type V secretion system BF17_04735 PF18624 CDI immunity protein BF17_04745 PF04829 Pre-toxin domain with VENN motif BF17_04745 PF05860 haemagglutination activity domain BF17_04745 PF13332 Hemagglutinin repeat BF17_04745 PF13018 Extended Signal Peptide of Type V secretion system BF17_04750 PF07262 CDI immunity protein BF17_04755 PF13332 Hemagglutinin repeat BF17_04755 PF04829 Pre-toxin domain with VENN motif BF17_04765 PF05860 haemagglutination activity domain BF17_04765 PF13332 Hemagglutinin repeat BF17_04765 PF13018 Extended Signal Peptide of Type V secretion system BF17_04765 PF04829 Pre-toxin domain with VENN motif BF17_04775 PF05860 haemagglutination activity domain BF17_04775 PF05594 Haemagluttinin repeat BF17_04775 PF04829 Pre-toxin domain with VENN motif BF17_04775 PF15526 Novel toxin 21 BF17_04775 PF13332 Hemagglutinin repeat BF17_04785 PF04829 Pre-toxin domain with VENN motif BF17_04785 PF13332 Hemagglutinin repeat BF17_04785 PF13018 Extended Signal Peptide of Type V secretion system BF17_04785 PF05860 haemagglutination activity domain BF17_04790 PF17287 POTRA domain BF17_04790 PF08479 POTRA domain, ShlB-type BF17_04790 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BF17_04840 PF00092 von Willebrand factor type A domain BF17_04845 PF02342 TerD domain BF17_04855 PF00092 von Willebrand factor type A domain BF17_04870 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BF17_04875 PF01979 Amidohydrolase family BF17_04880 PF07690 Major Facilitator Superfamily BF17_04880 PF00083 Sugar (and other) transporter BF17_04890 PF03729 Short repeat of unknown function (DUF308) BF17_04895 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_04895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF17_04905 PF05175 Methyltransferase small domain BF17_04910 PF03797 Autotransporter beta-domain BF17_04915 PF01863 Protein of unknown function DUF45 BF17_04920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF17_04925 PF00375 Sodium:dicarboxylate symporter family BF17_04930 PF10688 Bacterial inner membrane protein BF17_04935 PF08666 SAF domain BF17_04935 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BF17_04940 PF08125 Mannitol dehydrogenase C-terminal domain BF17_04940 PF01232 Mannitol dehydrogenase Rossmann domain BF17_04945 PF02614 Glucuronate isomerase BF17_04950 PF07690 Major Facilitator Superfamily BF17_04955 PF00392 Bacterial regulatory proteins, gntR family BF17_04955 PF07729 FCD domain BF17_04970 PF09335 SNARE associated Golgi protein BF17_04975 PF13721 SecD export protein N-terminal TM region BF17_04985 PF05957 Bacterial protein of unknown function (DUF883) BF17_04990 PF07332 Putative Actinobacterial Holin-X, holin superfamily III BF17_05000 PF07681 DoxX BF17_05005 PF13409 Glutathione S-transferase, N-terminal domain BF17_05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_05010 PF03466 LysR substrate binding domain BF17_05020 PF02678 Pirin BF17_05020 PF17954 Quercetinase C-terminal cupin domain BF17_05030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF17_05035 PF04348 LppC putative lipoprotein BF17_05040 PF02021 Uncharacterised protein family UPF0102 BF17_05045 PF13580 SIS domain BF17_05050 PF04972 BON domain BF17_05060 PF00912 Transglycosylase BF17_05070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_05070 PF00512 His Kinase A (phospho-acceptor) domain BF17_05070 PF00989 PAS fold BF17_05070 PF00072 Response regulator receiver domain BF17_05070 PF18415 Histidine kinase receptor ArcB trans-membrane domain BF17_05070 PF01627 Hpt domain BF17_05075 PF04055 Radical SAM superfamily BF17_05075 PF16199 Radical_SAM C-terminal domain BF17_05080 PF00310 Glutamine amidotransferases class-II BF17_05080 PF04898 Glutamate synthase central domain BF17_05080 PF01645 Conserved region in glutamate synthase BF17_05080 PF01493 GXGXG motif BF17_05085 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BF17_05085 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_05095 PF04386 Stringent starvation protein B BF17_05100 PF02798 Glutathione S-transferase, N-terminal domain BF17_05100 PF00043 Glutathione S-transferase, C-terminal domain BF17_05110 PF00380 Ribosomal protein S9/S16 BF17_05115 PF00572 Ribosomal protein L13 BF17_05120 PF03969 AFG1-like ATPase BF17_05125 PF06295 Protein of unknown function (DUF1043) BF17_05130 PF00595 PDZ domain BF17_05130 PF13180 PDZ domain BF17_05135 PF13180 PDZ domain BF17_05145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF17_05150 PF01722 BolA-like protein BF17_05155 PF13466 STAS domain BF17_05160 PF05494 MlaC protein BF17_05165 PF02470 MlaD protein BF17_05170 PF02405 Permease MlaE BF17_05175 PF00005 ABC transporter BF17_05180 PF01699 Sodium/calcium exchanger protein BF17_05185 PF01380 SIS domain BF17_05185 PF00571 CBS domain BF17_05195 PF06835 Lipopolysaccharide-assembly, LptC-related BF17_05200 PF03968 OstA-like protein BF17_05205 PF00005 ABC transporter BF17_05205 PF12399 Branched-chain amino acid ATP-binding cassette transporter BF17_05210 PF04552 Sigma-54, DNA binding domain BF17_05210 PF04963 Sigma-54 factor, core binding domain BF17_05210 PF00309 Sigma-54 factor, Activator interacting domain (AID) BF17_05215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BF17_05220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF17_05225 PF03668 P-loop ATPase protein family BF17_05230 PF00381 PTS HPr component phosphorylation site BF17_05235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF17_05235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF17_05240 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BF17_05240 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BF17_05245 PF01042 Endoribonuclease L-PSP BF17_05255 PF00356 Bacterial regulatory proteins, lacI family BF17_05260 PF00367 phosphotransferase system, EIIB BF17_05260 PF02378 Phosphotransferase system, EIIC BF17_05265 PF11941 Domain of unknown function (DUF3459) BF17_05265 PF00128 Alpha amylase, catalytic domain BF17_05270 PF01272 Transcription elongation factor, GreA/GreB, C-term BF17_05270 PF14760 Rnk N-terminus BF17_05275 PF07361 Cytochrome b562 BF17_05290 PF01523 Putative modulator of DNA gyrase BF17_05295 PF04751 Protein of unknown function (DUF615) BF17_05300 PF01337 Barstar (barnase inhibitor) BF17_05305 PF00545 ribonuclease BF17_05310 PF00171 Aldehyde dehydrogenase family BF17_05320 PF04632 Fusaric acid resistance protein family BF17_05325 PF13533 Biotin-lipoyl like BF17_05330 PF07869 Protein of unknown function (DUF1656) BF17_05335 PF03466 LysR substrate binding domain BF17_05335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_05340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_05340 PF03466 LysR substrate binding domain BF17_05355 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain BF17_05355 PF18413 Neuraminidase-like domain BF17_05360 PF12256 Insecticide toxin TcdB middle/N-terminal region BF17_05360 PF03534 Salmonella virulence plasmid 65kDa B protein BF17_05360 PF12255 Insecticide toxin TcdB middle/C-terminal region BF17_05385 PF14431 YwqJ-like deaminase BF17_05385 PF18807 Tripartite Tc toxins repeat BF17_05395 PF01523 Putative modulator of DNA gyrase BF17_05400 PF00795 Carbon-nitrogen hydrolase BF17_05405 PF13502 AsmA-like C-terminal region BF17_05405 PF13116 Protein of unknown function BF17_05410 PF00575 S1 RNA binding domain BF17_05410 PF10150 Ribonuclease E/G family BF17_05415 PF02545 Maf-like protein BF17_05420 PF04093 rod shape-determining protein MreD BF17_05425 PF04085 rod shape-determining protein MreC BF17_05435 PF00990 Diguanylate cyclase, GGDEF domain BF17_05435 PF17157 Gammaproteobacterial periplasmic sensor domain BF17_05435 PF00563 EAL domain BF17_05440 PF08240 Alcohol dehydrogenase GroES-like domain BF17_05440 PF00107 Zinc-binding dehydrogenase BF17_05445 PF00174 Oxidoreductase molybdopterin binding domain BF17_05450 PF01794 Ferric reductase like transmembrane component BF17_05455 PF01220 Dehydroquinase class II BF17_05460 PF00364 Biotin-requiring enzyme BF17_05465 PF02785 Biotin carboxylase C-terminal domain BF17_05465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF17_05465 PF00289 Biotin carboxylase, N-terminal domain BF17_05470 PF06196 Protein of unknown function (DUF997) BF17_05475 PF00474 Sodium:solute symporter family BF17_05485 PF01207 Dihydrouridine synthase (Dus) BF17_05490 PF02954 Bacterial regulatory protein, Fis family BF17_05495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF17_05495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF17_05510 PF05433 Glycine zipper 2TM domain BF17_05515 PF02665 Nitrate reductase gamma subunit BF17_05520 PF02613 Nitrate reductase delta subunit BF17_05525 PF14711 Respiratory nitrate reductase beta C-terminal BF17_05525 PF13247 4Fe-4S dicluster domain BF17_05530 PF00384 Molybdopterin oxidoreductase BF17_05530 PF01568 Molydopterin dinucleotide binding domain BF17_05530 PF14710 Respiratory nitrate reductase alpha N-terminal BF17_05535 PF07690 Major Facilitator Superfamily BF17_05550 PF00313 'Cold-shock' DNA-binding domain BF17_05555 PF00313 'Cold-shock' DNA-binding domain BF17_05570 PF02798 Glutathione S-transferase, N-terminal domain BF17_05575 PF01380 SIS domain BF17_05575 PF00571 CBS domain BF17_05580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF17_05580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF17_05590 PF02653 Branched-chain amino acid transport system / permease component BF17_05595 PF00005 ABC transporter BF17_05605 PF03279 Bacterial lipid A biosynthesis acyltransferase BF17_05615 PF00999 Sodium/hydrogen exchanger family BF17_05620 PF00860 Permease family BF17_05625 PF04221 RelB antitoxin BF17_05640 PF00528 Binding-protein-dependent transport system inner membrane component BF17_05645 PF00296 Luciferase-like monooxygenase BF17_05650 PF09084 NMT1/THI5 like BF17_05655 PF03358 NADPH-dependent FMN reductase BF17_05685 PF05593 RHS Repeat BF17_05685 PF03527 RHS protein BF17_05725 PF03527 RHS protein BF17_05725 PF05593 RHS Repeat BF17_05725 PF14220 Domain of unknown function (DUF4329) BF17_05750 PF04717 Type VI secretion system, phage-baseplate injector BF17_05765 PF01381 Helix-turn-helix BF17_05800 PF04717 Type VI secretion system, phage-baseplate injector BF17_05830 PF00004 ATPase family associated with various cellular activities (AAA) BF17_05830 PF10431 C-terminal, D2-small domain, of ClpB protein BF17_05830 PF17871 AAA lid domain BF17_05830 PF07724 AAA domain (Cdc48 subfamily) BF17_05880 PF05638 Type VI secretion system effector, Hcp BF17_05890 PF07148 Maltose operon periplasmic protein precursor (MalM) BF17_05895 PF02264 LamB porin BF17_05900 PF00005 ABC transporter BF17_05900 PF17912 MalK OB fold domain BF17_05910 PF01547 Bacterial extracellular solute-binding protein BF17_05915 PF14785 Maltose transport system permease protein MalF P2 domain BF17_05915 PF00528 Binding-protein-dependent transport system inner membrane component BF17_05920 PF00528 Binding-protein-dependent transport system inner membrane component BF17_05925 PF06146 Phosphate-starvation-inducible E BF17_05930 PF00342 Phosphoglucose isomerase BF17_05935 PF01842 ACT domain BF17_05935 PF00696 Amino acid kinase family BF17_05940 PF01758 Sodium Bile acid symporter family BF17_05945 PF17287 POTRA domain BF17_05945 PF08479 POTRA domain, ShlB-type BF17_05945 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BF17_05950 PF05860 haemagglutination activity domain BF17_05950 PF13332 Hemagglutinin repeat BF17_05955 PF02965 Vitamin B12 dependent methionine synthase, activation domain BF17_05955 PF02574 Homocysteine S-methyltransferase BF17_05955 PF00809 Pterin binding enzyme BF17_05955 PF02607 B12 binding domain BF17_05955 PF02310 B12 binding domain BF17_05960 PF01614 Bacterial transcriptional regulator BF17_05960 PF09339 IclR helix-turn-helix domain BF17_05965 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BF17_05975 PF00463 Isocitrate lyase family BF17_05980 PF01274 Malate synthase BF17_05985 PF04204 Homoserine O-succinyltransferase BF17_06030 PF08501 Shikimate dehydrogenase substrate binding domain BF17_06030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BF17_06030 PF01488 Shikimate / quinate 5-dehydrogenase BF17_06035 PF01300 Telomere recombination BF17_06040 PF01396 Topoisomerase DNA binding C4 zinc finger BF17_06045 PF04361 Protein of unknown function (DUF494) BF17_06050 PF02481 DNA recombination-mediator protein A BF17_06050 PF17782 DprA winged helix domain BF17_06055 PF01327 Polypeptide deformylase BF17_06060 PF02911 Formyl transferase, C-terminal domain BF17_06060 PF00551 Formyl transferase BF17_06065 PF01029 NusB family BF17_06065 PF01189 16S rRNA methyltransferase RsmB/F BF17_06070 PF02080 TrkA-C domain BF17_06070 PF02254 TrkA-N domain BF17_06075 PF01741 Large-conductance mechanosensitive channel, MscL BF17_06080 PF03889 Alternative ribosome-rescue factor A BF17_06085 PF13411 MerR HTH family regulatory protein BF17_06110 PF01196 Ribosomal protein L17 BF17_06115 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BF17_06115 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BF17_06115 PF01000 RNA polymerase Rpb3/RpoA insert domain BF17_06120 PF01479 S4 domain BF17_06120 PF00163 Ribosomal protein S4/S9 N-terminal domain BF17_06125 PF00411 Ribosomal protein S11 BF17_06130 PF00416 Ribosomal protein S13/S18 BF17_06135 PF00444 Ribosomal protein L36 BF17_06140 PF00344 SecY translocase BF17_06145 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BF17_06150 PF00327 Ribosomal protein L30p/L7e BF17_06155 PF00333 Ribosomal protein S5, N-terminal domain BF17_06155 PF03719 Ribosomal protein S5, C-terminal domain BF17_06160 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BF17_06165 PF00347 Ribosomal protein L6 BF17_06170 PF00410 Ribosomal protein S8 BF17_06175 PF00253 Ribosomal protein S14p/S29e BF17_06180 PF00281 Ribosomal protein L5 BF17_06180 PF00673 ribosomal L5P family C-terminus BF17_06185 PF00467 KOW motif BF17_06185 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BF17_06190 PF00238 Ribosomal protein L14p/L23e BF17_06195 PF00366 Ribosomal protein S17 BF17_06200 PF00831 Ribosomal L29 protein BF17_06205 PF00252 Ribosomal protein L16p/L10e BF17_06210 PF00189 Ribosomal protein S3, C-terminal domain BF17_06210 PF07650 KH domain BF17_06215 PF00237 Ribosomal protein L22p/L17e BF17_06220 PF00203 Ribosomal protein S19 BF17_06225 PF03947 Ribosomal Proteins L2, C-terminal domain BF17_06225 PF00181 Ribosomal Proteins L2, RNA binding domain BF17_06230 PF00276 Ribosomal protein L23 BF17_06235 PF00573 Ribosomal protein L4/L1 family BF17_06240 PF00297 Ribosomal protein L3 BF17_06245 PF00338 Ribosomal protein S10p/S20e BF17_06250 PF00210 Ferritin-like domain BF17_06255 PF04324 BFD-like [2Fe-2S] binding domain BF17_06275 PF03144 Elongation factor Tu domain 2 BF17_06275 PF00009 Elongation factor Tu GTP binding domain BF17_06275 PF03764 Elongation factor G, domain IV BF17_06275 PF14492 Elongation Factor G, domain II BF17_06275 PF00679 Elongation factor G C-terminus BF17_06280 PF00177 Ribosomal protein S7p/S5e BF17_06285 PF00164 Ribosomal protein S12/S23 BF17_06290 PF04077 DsrH like protein BF17_06295 PF02635 DsrE/DsrF-like family BF17_06300 PF02635 DsrE/DsrF-like family BF17_06305 PF13309 HTH domain BF17_06305 PF08348 YheO-like PAS domain BF17_06310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BF17_06310 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BF17_06315 PF04102 SlyX BF17_06325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BF17_06330 PF09526 Probable metal-binding protein (DUF2387) BF17_06335 PF02254 TrkA-N domain BF17_06335 PF00999 Sodium/hydrogen exchanger family BF17_06340 PF02525 Flavodoxin-like fold BF17_06345 PF12848 ABC transporter BF17_06345 PF00005 ABC transporter BF17_06350 PF00535 Glycosyl transferase family 2 BF17_06360 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BF17_06365 PF00528 Binding-protein-dependent transport system inner membrane component BF17_06370 PF00005 ABC transporter BF17_06375 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BF17_06380 PF01810 LysE type translocator BF17_06385 PF00561 alpha/beta hydrolase fold BF17_06390 PF06794 Uncharacterised protein family (UPF0270) BF17_06395 PF00485 Phosphoribulokinase / Uridine kinase family BF17_06410 PF13545 Crp-like helix-turn-helix domain BF17_06410 PF00027 Cyclic nucleotide-binding domain BF17_06415 PF12805 FUSC-like inner membrane protein yccS BF17_06420 PF00202 Aminotransferase class-III BF17_06425 PF00117 Glutamine amidotransferase class-I BF17_06435 PF10385 RNA polymerase beta subunit external 1 domain BF17_06435 PF04561 RNA polymerase Rpb2, domain 2 BF17_06435 PF00562 RNA polymerase Rpb2, domain 6 BF17_06435 PF04563 RNA polymerase beta subunit BF17_06435 PF04560 RNA polymerase Rpb2, domain 7 BF17_06435 PF04565 RNA polymerase Rpb2, domain 3 BF17_06440 PF05872 Bacterial protein of unknown function (DUF853) BF17_06445 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BF17_06455 PF02056 Family 4 glycosyl hydrolase BF17_06455 PF11975 Family 4 glycosyl hydrolase C-terminal domain BF17_06460 PF00356 Bacterial regulatory proteins, lacI family BF17_06475 PF07690 Major Facilitator Superfamily BF17_06480 PF07969 Amidohydrolase family BF17_06485 PF01526 Tn3 transposase DDE domain BF17_06485 PF13700 Domain of unknown function (DUF4158) BF17_06490 PF01527 Transposase BF17_06510 PF00581 Rhodanese-like domain BF17_06510 PF00899 ThiF family BF17_06530 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BF17_06550 PF18267 Rubredoxin NAD+ reductase C-terminal domain BF17_06550 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_06550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF17_06550 PF04324 BFD-like [2Fe-2S] binding domain BF17_06550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF17_06555 PF13806 Rieske-like [2Fe-2S] domain BF17_06560 PF01226 Formate/nitrite transporter BF17_06565 PF14824 Sirohaem biosynthesis protein central BF17_06565 PF10414 Sirohaem synthase dimerisation region BF17_06565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF17_06570 PF00579 tRNA synthetases class I (W and Y) BF17_06575 PF13419 Haloacid dehalogenase-like hydrolase BF17_06580 PF00834 Ribulose-phosphate 3 epimerase family BF17_06585 PF02086 D12 class N6 adenine-specific DNA methyltransferase BF17_06590 PF05036 Sporulation related domain BF17_06595 PF01761 3-dehydroquinate synthase BF17_06600 PF01202 Shikimate kinase BF17_06605 PF03958 Bacterial type II/III secretion system short domain BF17_06605 PF00263 Bacterial type II and III secretion system protein BF17_06630 PF00905 Penicillin binding protein transpeptidase domain BF17_06630 PF00912 Transglycosylase BF17_06630 PF17092 Penicillin-binding protein OB-like domain BF17_06635 PF00293 NUDIX domain BF17_06640 PF07095 Intracellular growth attenuator protein IgaA BF17_06645 PF13419 Haloacid dehalogenase-like hydrolase BF17_06650 PF01479 S4 domain BF17_06655 PF01430 Hsp33 protein BF17_06660 PF01293 Phosphoenolpyruvate carboxykinase BF17_06665 PF00672 HAMP domain BF17_06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_06665 PF00512 His Kinase A (phospho-acceptor) domain BF17_06670 PF00072 Response regulator receiver domain BF17_06670 PF00486 Transcriptional regulatory protein, C terminal BF17_06675 PF01272 Transcription elongation factor, GreA/GreB, C-term BF17_06675 PF03449 Transcription elongation factor, N-terminal BF17_06690 PF04023 FeoA domain BF17_06695 PF02421 Ferrous iron transport protein B BF17_06695 PF17910 FeoB cytosolic helical domain BF17_06695 PF07664 Ferrous iron transport protein B C terminus BF17_06695 PF07670 Nucleoside recognition BF17_06700 PF09012 FeoC like transcriptional regulator BF17_06715 PF00561 alpha/beta hydrolase fold BF17_06725 PF00156 Phosphoribosyl transferase domain BF17_06730 PF01521 Iron-sulphur cluster biosynthesis BF17_06730 PF01106 NifU-like domain BF17_06735 PF02446 4-alpha-glucanotransferase BF17_06740 PF00343 Carbohydrate phosphorylase BF17_06745 PF00196 Bacterial regulatory proteins, luxR family BF17_06745 PF17874 MalT-like TPR region BF17_06750 PF00581 Rhodanese-like domain BF17_06755 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BF17_06755 PF01694 Rhomboid family BF17_06760 PF00455 DeoR C terminal sensor domain BF17_06760 PF08220 DeoR-like helix-turn-helix domain BF17_06780 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BF17_06780 PF01266 FAD dependent oxidoreductase BF17_06785 PF00343 Carbohydrate phosphorylase BF17_06790 PF08323 Starch synthase catalytic domain BF17_06790 PF00534 Glycosyl transferases group 1 BF17_06795 PF00483 Nucleotidyl transferase BF17_06800 PF18390 Glycogen debranching enzyme C-terminal domain BF17_06800 PF00128 Alpha amylase, catalytic domain BF17_06800 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF17_06805 PF00128 Alpha amylase, catalytic domain BF17_06805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF17_06805 PF02806 Alpha amylase, C-terminal all-beta domain BF17_06810 PF07694 5TMR of 5TMR-LYT BF17_06810 PF06580 Histidine kinase BF17_06815 PF11924 Inverse autotransporter, beta-domain BF17_06815 PF07979 Intimin C-type lectin domain BF17_06815 PF09134 Invasin, domain 3 BF17_06815 PF02369 Bacterial Ig-like domain (group 1) BF17_06835 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF17_06835 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF17_06840 PF01914 MarC family integral membrane protein BF17_06855 PF01202 Shikimate kinase BF17_06860 PF02447 GntP family permease BF17_06865 PF00356 Bacterial regulatory proteins, lacI family BF17_06865 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF17_06870 PF17954 Quercetinase C-terminal cupin domain BF17_06870 PF02678 Pirin BF17_06880 PF01384 Phosphate transporter family BF17_06885 PF10625 Universal stress protein B (UspB) BF17_06890 PF00582 Universal stress protein family BF17_06895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF17_06895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF17_06900 PF08548 Peptidase M10 serralysin C terminal BF17_06900 PF00413 Matrixin BF17_06900 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BF17_06905 PF04445 Putative SAM-dependent methyltransferase BF17_06910 PF01432 Peptidase family M3 BF17_06915 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BF17_06920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF17_06920 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_06925 PF17853 GGDEF-like domain BF17_06925 PF05651 Putative sugar diacid recognition BF17_06925 PF13556 PucR C-terminal helix-turn-helix domain BF17_06930 PF02447 GntP family permease BF17_06935 PF02595 Glycerate kinase family BF17_06940 PF01527 Transposase BF17_06945 PF13683 Integrase core domain BF17_06945 PF13276 HTH-like domain BF17_06975 PF03631 Virulence factor BrkB BF17_06980 PF02611 CDP-diacylglycerol pyrophosphatase BF17_06985 PF05170 AsmA family BF17_06990 PF00563 EAL domain BF17_06995 PF01361 Tautomerase enzyme BF17_07000 PF00294 pfkB family carbohydrate kinase BF17_07005 PF05193 Peptidase M16 inactive domain BF17_07005 PF00675 Insulinase (Peptidase family M16) BF17_07015 PF00375 Sodium:dicarboxylate symporter family BF17_07020 PF06917 Periplasmic pectate lyase BF17_07025 PF06178 Oligogalacturonate-specific porin protein (KdgM) BF17_07030 PF00990 Diguanylate cyclase, GGDEF domain BF17_07030 PF00563 EAL domain BF17_07030 PF17154 Gammaproteobacterial periplasmic sensor domain BF17_07030 PF00672 HAMP domain BF17_07035 PF01270 Glycosyl hydrolases family 8 BF17_07040 PF00005 ABC transporter BF17_07040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF17_07045 PF00005 ABC transporter BF17_07045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF17_07050 PF12911 N-terminal TM domain of oligopeptide transport permease C BF17_07050 PF00528 Binding-protein-dependent transport system inner membrane component BF17_07055 PF00528 Binding-protein-dependent transport system inner membrane component BF17_07060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF17_07080 PF05860 haemagglutination activity domain BF17_07080 PF13018 Extended Signal Peptide of Type V secretion system BF17_07080 PF04829 Pre-toxin domain with VENN motif BF17_07080 PF13332 Hemagglutinin repeat BF17_07090 PF07690 Major Facilitator Superfamily BF17_07095 PF07730 Histidine kinase BF17_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_07095 PF05231 MASE1 BF17_07100 PF00196 Bacterial regulatory proteins, luxR family BF17_07100 PF00072 Response regulator receiver domain BF17_07105 PF08019 Phosphoethanolamine transferase EptA/EptB BF17_07105 PF00884 Sulfatase BF17_07115 PF12146 Serine aminopeptidase, S33 BF17_07125 PF00324 Amino acid permease BF17_07130 PF00221 Aromatic amino acid lyase BF17_07135 PF17392 Urocanase C-terminal domain BF17_07135 PF17391 Urocanase N-terminal domain BF17_07135 PF01175 Urocanase Rossmann-like domain BF17_07140 PF00291 Pyridoxal-phosphate dependent enzyme BF17_07145 PF00156 Phosphoribosyl transferase domain BF17_07160 PF01497 Periplasmic binding protein BF17_07165 PF01032 FecCD transport family BF17_07170 PF01032 FecCD transport family BF17_07175 PF00005 ABC transporter BF17_07205 PF13358 DDE superfamily endonuclease BF17_07205 PF13592 Winged helix-turn helix BF17_07285 PF17345 Family of unknown function (DUF5375) BF17_07315 PF04606 Ogr/Delta-like zinc finger BF17_07345 PF12833 Helix-turn-helix domain BF17_07350 PF02653 Branched-chain amino acid transport system / permease component BF17_07355 PF00005 ABC transporter BF17_07360 PF13407 Periplasmic binding protein domain BF17_07370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF17_07370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF17_07380 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_07380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_07385 PF13954 PapC N-terminal domain BF17_07385 PF00577 Outer membrane usher protein BF17_07385 PF13953 PapC C-terminal domain BF17_07390 PF00419 Fimbrial protein BF17_07395 PF01757 Acyltransferase family BF17_07400 PF07690 Major Facilitator Superfamily BF17_07425 PF00009 Elongation factor Tu GTP binding domain BF17_07425 PF03144 Elongation factor Tu domain 2 BF17_07425 PF09107 Elongation factor SelB, winged helix BF17_07425 PF09106 Elongation factor SelB, winged helix BF17_07430 PF03841 L-seryl-tRNA selenium transferase BF17_07430 PF12390 Selenocysteine synthase N terminal BF17_07435 PF04216 Protein involved in formate dehydrogenase formation BF17_07440 PF01292 Prokaryotic cytochrome b561 BF17_07445 PF13247 4Fe-4S dicluster domain BF17_07445 PF09163 Formate dehydrogenase N, transmembrane BF17_07450 PF00384 Molybdopterin oxidoreductase BF17_07450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF17_07450 PF01568 Molydopterin dinucleotide binding domain BF17_07455 PF01568 Molydopterin dinucleotide binding domain BF17_07455 PF00384 Molybdopterin oxidoreductase BF17_07455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF17_07460 PF02634 FdhD/NarQ family BF17_07465 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF17_07465 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF17_07470 PF02203 Tar ligand binding domain homologue BF17_07470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF17_07470 PF00672 HAMP domain BF17_07485 PF10928 Protein of unknown function (DUF2810) BF17_07515 PF05068 Mannitol repressor BF17_07520 PF08125 Mannitol dehydrogenase C-terminal domain BF17_07520 PF01232 Mannitol dehydrogenase Rossmann domain BF17_07525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF17_07525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF17_07525 PF02378 Phosphotransferase system, EIIC BF17_07530 PF11254 Protein of unknown function (DUF3053) BF17_07535 PF02092 Glycyl-tRNA synthetase beta subunit BF17_07535 PF05746 DALR anticodon binding domain BF17_07540 PF02091 Glycyl-tRNA synthetase alpha subunit BF17_07545 PF03352 Methyladenine glycosylase BF17_07555 PF13488 Glycine zipper BF17_07555 PF00691 OmpA family BF17_07565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF17_07565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF17_07570 PF00128 Alpha amylase, catalytic domain BF17_07585 PF00155 Aminotransferase class I and II BF17_07590 PF02080 TrkA-C domain BF17_07590 PF06826 Predicted Permease Membrane Region BF17_07600 PF00011 Hsp20/alpha crystallin family BF17_07605 PF00011 Hsp20/alpha crystallin family BF17_07610 PF07119 Protein of unknown function (DUF1375) BF17_07615 PF07676 WD40-like Beta Propeller Repeat BF17_07615 PF12566 Protein of unknown function (DUF3748) BF17_07620 PF13291 ACT domain BF17_07620 PF00291 Pyridoxal-phosphate dependent enzyme BF17_07625 PF02423 Ornithine cyclodeaminase/mu-crystallin family BF17_07640 PF01751 Toprim domain BF17_07640 PF18053 DNA gyrase B subunit insert domain BF17_07640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_07640 PF00986 DNA gyrase B subunit, carboxyl terminus BF17_07640 PF00204 DNA gyrase B BF17_07655 PF00712 DNA polymerase III beta subunit, N-terminal domain BF17_07655 PF02768 DNA polymerase III beta subunit, C-terminal domain BF17_07655 PF02767 DNA polymerase III beta subunit, central domain BF17_07660 PF00308 Bacterial dnaA protein BF17_07660 PF08299 Bacterial dnaA protein helix-turn-helix BF17_07660 PF11638 DnaA N-terminal domain BF17_07670 PF00825 Ribonuclease P BF17_07675 PF01809 Putative membrane protein insertion efficiency factor BF17_07680 PF14849 YidC periplasmic domain BF17_07680 PF02096 60Kd inner membrane protein BF17_07685 PF01926 50S ribosome-binding GTPase BF17_07685 PF10396 GTP-binding protein TrmE N-terminus BF17_07685 PF12631 MnmE helical domain BF17_07690 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BF17_07690 PF07055 Enoyl reductase FAD binding domain BF17_07690 PF12241 Trans-2-enoyl-CoA reductase catalytic region BF17_07695 PF00860 Permease family BF17_07700 PF13419 Haloacid dehalogenase-like hydrolase BF17_07705 PF00528 Binding-protein-dependent transport system inner membrane component BF17_07710 PF00528 Binding-protein-dependent transport system inner membrane component BF17_07715 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF17_07725 PF01895 PhoU domain BF17_07730 PF00005 ABC transporter BF17_07735 PF00528 Binding-protein-dependent transport system inner membrane component BF17_07740 PF00528 Binding-protein-dependent transport system inner membrane component BF17_07745 PF12849 PBP superfamily domain BF17_07750 PF01380 SIS domain BF17_07755 PF12804 MobA-like NTP transferase domain BF17_07755 PF00132 Bacterial transferase hexapeptide (six repeats) BF17_07760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BF17_07760 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BF17_07765 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF17_07765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF17_07770 PF00231 ATP synthase BF17_07775 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF17_07775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF17_07775 PF00306 ATP synthase alpha/beta chain, C terminal domain BF17_07780 PF00213 ATP synthase delta (OSCP) subunit BF17_07785 PF00430 ATP synthase B/B' CF(0) BF17_07790 PF00137 ATP synthase subunit C BF17_07795 PF00119 ATP synthase A chain BF17_07800 PF03899 ATP synthase I chain BF17_07805 PF02527 rRNA small subunit methyltransferase G BF17_07810 PF13932 GidA associated domain BF17_07810 PF01134 Glucose inhibited division protein A BF17_07815 PF00258 Flavodoxin BF17_07820 PF01037 Lrp/AsnC ligand binding domain BF17_07825 PF03590 Aspartate-ammonia ligase BF17_07830 PF05762 VWA domain containing CoxE-like protein BF17_07835 PF12592 Protein of unknown function (DUF3763) BF17_07835 PF17868 AAA lid domain BF17_07835 PF07728 AAA domain (dynein-related subfamily) BF17_07840 PF02705 K+ potassium transporter BF17_07845 PF05025 RbsD / FucU transport protein family BF17_07850 PF00005 ABC transporter BF17_07855 PF02653 Branched-chain amino acid transport system / permease component BF17_07860 PF13407 Periplasmic binding protein domain BF17_07865 PF00294 pfkB family carbohydrate kinase BF17_07870 PF00356 Bacterial regulatory proteins, lacI family BF17_07875 PF07690 Major Facilitator Superfamily BF17_07880 PF00392 Bacterial regulatory proteins, gntR family BF17_07880 PF07729 FCD domain BF17_07920 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BF17_07930 PF06288 Protein of unknown function (DUF1040) BF17_07935 PF01636 Phosphotransferase enzyme family BF17_07940 PF01323 DSBA-like thioredoxin domain BF17_07955 PF01926 50S ribosome-binding GTPase BF17_07965 PF04220 Der GTPase activator (YihI) BF17_07970 PF04055 Radical SAM superfamily BF17_07970 PF06969 HemN C-terminal domain BF17_07975 PF00072 Response regulator receiver domain BF17_07975 PF02954 Bacterial regulatory protein, Fis family BF17_07975 PF00158 Sigma-54 interaction domain BF17_07980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_07980 PF00989 PAS fold BF17_07980 PF00512 His Kinase A (phospho-acceptor) domain BF17_07985 PF03951 Glutamine synthetase, beta-Grasp domain BF17_07985 PF00120 Glutamine synthetase, catalytic domain BF17_07995 PF13419 Haloacid dehalogenase-like hydrolase BF17_08000 PF03631 Virulence factor BrkB BF17_08005 PF02580 D-Tyr-tRNA(Tyr) deacylase BF17_08010 PF09500 Putative thioesterase (yiiD_Cterm) BF17_08010 PF00583 Acetyltransferase (GNAT) family BF17_08015 PF05170 AsmA family BF17_08020 PF00860 Permease family BF17_08025 PF03616 Sodium/glutamate symporter BF17_08030 PF00270 DEAD/DEAH box helicase BF17_08030 PF00271 Helicase conserved C-terminal domain BF17_08030 PF17191 RecG wedge domain BF17_08035 PF00588 SpoU rRNA Methylase family BF17_08035 PF12105 SpoU, rRNA methylase, C-terminal BF17_08040 PF02824 TGS domain BF17_08040 PF13291 ACT domain BF17_08040 PF04607 Region found in RelA / SpoT proteins BF17_08045 PF01192 RNA polymerase Rpb6 BF17_08050 PF00625 Guanylate kinase BF17_08055 PF01653 NAD-dependent DNA ligase adenylation domain BF17_08055 PF03120 NAD-dependent DNA ligase OB-fold domain BF17_08060 PF03458 UPF0126 domain BF17_08070 PF01527 Transposase BF17_08075 PF13276 HTH-like domain BF17_08075 PF13683 Integrase core domain BF17_08080 PF00665 Integrase core domain BF17_08080 PF13333 Integrase core domain BF17_08080 PF13276 HTH-like domain BF17_08120 PF05638 Type VI secretion system effector, Hcp BF17_08135 PF08340 Domain of unknown function (DUF1732) BF17_08135 PF03755 YicC-like family, N-terminal region BF17_08140 PF03725 3' exoribonuclease family, domain 2 BF17_08140 PF01138 3' exoribonuclease family, domain 1 BF17_08145 PF00156 Phosphoribosyl transferase domain BF17_08150 PF00440 Bacterial regulatory proteins, tetR family BF17_08155 PF00692 dUTPase BF17_08160 PF04127 DNA / pantothenate metabolism flavoprotein BF17_08160 PF02441 Flavoprotein BF17_08165 PF04002 RadC-like JAB domain BF17_08170 PF00830 Ribosomal L28 family BF17_08175 PF00471 Ribosomal protein L33 BF17_08180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BF17_08180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BF17_08180 PF06827 Zinc finger found in FPG and IleRS BF17_08185 PF01467 Cytidylyltransferase-like BF17_08190 PF00535 Glycosyl transferase family 2 BF17_08195 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BF17_08200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BF17_08205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BF17_08210 PF01370 NAD dependent epimerase/dehydratase family BF17_08215 PF00155 Aminotransferase class I and II BF17_08220 PF00107 Zinc-binding dehydrogenase BF17_08220 PF08240 Alcohol dehydrogenase GroES-like domain BF17_08225 PF04748 Divergent polysaccharide deacetylase BF17_08240 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BF17_08240 PF01676 Metalloenzyme superfamily BF17_08245 PF00581 Rhodanese-like domain BF17_08250 PF00462 Glutaredoxin BF17_08255 PF02556 Preprotein translocase subunit SecB BF17_08260 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BF17_08260 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BF17_08265 PF00132 Bacterial transferase hexapeptide (six repeats) BF17_08265 PF06426 Serine acetyltransferase, N-terminal BF17_08270 PF00588 SpoU rRNA Methylase family BF17_08275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF17_08275 PF02805 Metal binding domain of Ada BF17_08275 PF12833 Helix-turn-helix domain BF17_08275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF17_08280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_08280 PF16527 Two-component sensor protein CpxA, periplasmic domain BF17_08280 PF00672 HAMP domain BF17_08280 PF00512 His Kinase A (phospho-acceptor) domain BF17_08285 PF00486 Transcriptional regulatory protein, C terminal BF17_08285 PF00072 Response regulator receiver domain BF17_08290 PF07813 LTXXQ motif family protein BF17_08300 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF17_08305 PF01850 PIN domain BF17_08310 PF01545 Cation efflux family BF17_08310 PF16916 Dimerisation domain of Zinc Transporter BF17_08315 PF00365 Phosphofructokinase BF17_08325 PF00121 Triosephosphate isomerase BF17_08330 PF07305 Protein of unknown function (DUF1454) BF17_08335 PF05656 Protein of unknown function (DUF805) BF17_08340 PF00970 Oxidoreductase FAD-binding domain BF17_08340 PF00175 Oxidoreductase NAD-binding domain BF17_08345 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF17_08350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF17_08350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF17_08355 PF00230 Major intrinsic protein BF17_08360 PF06005 Cell division protein ZapB BF17_08385 PF01527 Transposase BF17_08390 PF03412 Peptidase C39 family BF17_08390 PF00005 ABC transporter BF17_08390 PF00664 ABC transporter transmembrane region BF17_08395 PF00529 HlyD membrane-fusion protein of T1SS BF17_08395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BF17_08415 PF03737 Aldolase/RraA BF17_08420 PF01040 UbiA prenyltransferase family BF17_08425 PF10431 C-terminal, D2-small domain, of ClpB protein BF17_08425 PF07724 AAA domain (Cdc48 subfamily) BF17_08425 PF00004 ATPase family associated with various cellular activities (AAA) BF17_08430 PF00227 Proteasome subunit BF17_08435 PF05036 Sporulation related domain BF17_08440 PF00356 Bacterial regulatory proteins, lacI family BF17_08450 PF18074 Primosomal protein N C-terminal domain BF17_08450 PF00271 Helicase conserved C-terminal domain BF17_08450 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BF17_08450 PF17764 3′ DNA-binding domain (3′BD) BF17_08450 PF00270 DEAD/DEAH box helicase BF17_08455 PF01197 Ribosomal protein L31 BF17_08465 PF05360 yiaA/B two helix domain BF17_08470 PF01340 Met Apo-repressor, MetJ BF17_08475 PF01053 Cys/Met metabolism PLP-dependent enzyme BF17_08480 PF03447 Homoserine dehydrogenase, NAD binding domain BF17_08480 PF00742 Homoserine dehydrogenase BF17_08480 PF00696 Amino acid kinase family BF17_08485 PF02219 Methylenetetrahydrofolate reductase BF17_08490 PF00311 Phosphoenolpyruvate carboxylase BF17_08495 PF07687 Peptidase dimerisation domain BF17_08495 PF01546 Peptidase family M20/M25/M40 BF17_08500 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF17_08500 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF17_08505 PF00696 Amino acid kinase family BF17_08510 PF14698 Argininosuccinate lyase C-terminal BF17_08510 PF00206 Lyase BF17_08520 PF00593 TonB dependent receptor BF17_08520 PF07715 TonB-dependent Receptor Plug Domain BF17_08530 PF00664 ABC transporter transmembrane region BF17_08530 PF00005 ABC transporter BF17_08535 PF00529 HlyD membrane-fusion protein of T1SS BF17_08545 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_08545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF17_08550 PF00462 Glutaredoxin BF17_08550 PF08534 Redoxin BF17_08555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_08555 PF03466 LysR substrate binding domain BF17_08560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF17_08560 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_08565 PF00440 Bacterial regulatory proteins, tetR family BF17_08570 PF07226 Protein of unknown function (DUF1422) BF17_08575 PF05958 tRNA (Uracil-5-)-methyltransferase BF17_08580 PF07715 TonB-dependent Receptor Plug Domain BF17_08580 PF00593 TonB dependent receptor BF17_08585 PF01177 Asp/Glu/Hydantoin racemase BF17_08625 PF13407 Periplasmic binding protein domain BF17_08630 PF00005 ABC transporter BF17_08635 PF02653 Branched-chain amino acid transport system / permease component BF17_08640 PF02653 Branched-chain amino acid transport system / permease component BF17_08645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_08645 PF03466 LysR substrate binding domain BF17_08650 PF04219 Protein of unknown function, DUF BF17_08655 PF01078 Magnesium chelatase, subunit ChlI BF17_08655 PF13335 Magnesium chelatase, subunit ChlI C-terminal BF17_08665 PF00205 Thiamine pyrophosphate enzyme, central domain BF17_08665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF17_08665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF17_08675 PF01063 Amino-transferase class IV BF17_08680 PF00920 Dehydratase family BF17_08685 PF00585 C-terminal regulatory domain of Threonine dehydratase BF17_08685 PF00291 Pyridoxal-phosphate dependent enzyme BF17_08705 PF03466 LysR substrate binding domain BF17_08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_08710 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF17_08710 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF17_08715 PF06958 S-type Pyocin BF17_08720 PF01320 Colicin immunity protein / pyocin immunity protein BF17_08740 PF03515 Colicin-like bacteriocin tRNase domain BF17_08740 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 BF17_08745 PF01320 Colicin immunity protein / pyocin immunity protein BF17_08770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_08770 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_08780 PF13953 PapC C-terminal domain BF17_08780 PF13954 PapC N-terminal domain BF17_08780 PF00577 Outer membrane usher protein BF17_08785 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_08785 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_08805 PF00580 UvrD/REP helicase N-terminal domain BF17_08805 PF13361 UvrD-like helicase C-terminal domain BF17_08810 PF00295 Glycosyl hydrolases family 28 BF17_08815 PF02541 Ppx/GppA phosphatase family BF17_08820 PF00270 DEAD/DEAH box helicase BF17_08820 PF00271 Helicase conserved C-terminal domain BF17_08825 PF00085 Thioredoxin BF17_08830 PF07497 Rho termination factor, RNA-binding domain BF17_08830 PF07498 Rho termination factor, N-terminal domain BF17_08830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF17_08835 PF00953 Glycosyl transferase family 4 BF17_08840 PF02706 Chain length determinant protein BF17_08845 PF02350 UDP-N-acetylglucosamine 2-epimerase BF17_08850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF17_08850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF17_08850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF17_08855 PF16363 GDP-mannose 4,6 dehydratase BF17_08860 PF00483 Nucleotidyl transferase BF17_08870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF17_08875 PF01943 Polysaccharide biosynthesis protein BF17_08880 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 BF17_08885 PF06899 WzyE protein, O-antigen assembly polymerase BF17_08890 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF17_08895 PF00324 Amino acid permease BF17_08930 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BF17_08935 PF02602 Uroporphyrinogen-III synthase HemD BF17_08940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BF17_08940 PF03900 Porphobilinogen deaminase, C-terminal domain BF17_08950 PF01295 Adenylate cyclase, class-I BF17_08950 PF12633 Adenylate cyclase NT domain BF17_08955 PF12633 Adenylate cyclase NT domain BF17_08955 PF01295 Adenylate cyclase, class-I BF17_08965 PF03400 IS1 transposase BF17_08975 PF01491 Frataxin-like domain BF17_08980 PF13627 Prokaryotic lipoprotein-attachment site BF17_08985 PF01678 Diaminopimelate epimerase BF17_08990 PF04340 Protein of unknown function, DUF484 BF17_08995 PF00589 Phage integrase family BF17_08995 PF02899 Phage integrase, N-terminal SAM-like domain BF17_09000 PF13419 Haloacid dehalogenase-like hydrolase BF17_09005 PF00580 UvrD/REP helicase N-terminal domain BF17_09005 PF13361 UvrD-like helicase C-terminal domain BF17_09020 PF09370 Phosphoenolpyruvate hydrolase-like BF17_09025 PF01544 CorA-like Mg2+ transporter protein BF17_09030 PF00892 EamA-like transporter family BF17_09035 PF03061 Thioesterase superfamily BF17_09040 PF02253 Phospholipase A1 BF17_09045 PF00271 Helicase conserved C-terminal domain BF17_09045 PF00570 HRDC domain BF17_09045 PF16124 RecQ zinc-binding BF17_09045 PF09382 RQC domain BF17_09045 PF00270 DEAD/DEAH box helicase BF17_09050 PF01810 LysE type translocator BF17_09055 PF01810 LysE type translocator BF17_09060 PF12146 Serine aminopeptidase, S33 BF17_09075 PF03009 Glycerophosphoryl diester phosphodiesterase family BF17_09080 PF07690 Major Facilitator Superfamily BF17_09090 PF01266 FAD dependent oxidoreductase BF17_09090 PF04324 BFD-like [2Fe-2S] binding domain BF17_09095 PF00890 FAD binding domain BF17_09100 PF02754 Cysteine-rich domain BF17_09100 PF13183 4Fe-4S dicluster domain BF17_09105 PF08786 DcrB BF17_09110 PF02592 Putative vitamin uptake transporter BF17_09120 PF01206 Sulfurtransferase TusA BF17_09125 PF00403 Heavy-metal-associated domain BF17_09130 PF07947 YhhN family BF17_09145 PF06611 Protein of unknown function (DUF1145) BF17_09155 PF02881 SRP54-type protein, helical bundle domain BF17_09155 PF00448 SRP54-type protein, GTPase domain BF17_09160 PF00005 ABC transporter BF17_09165 PF02687 FtsX-like permease family BF17_09165 PF18075 FtsX extracellular domain BF17_09170 PF00140 Sigma-70 factor, region 1.2 BF17_09170 PF04545 Sigma-70, region 4 BF17_09170 PF04542 Sigma-70 region 2 BF17_09175 PF12568 Acetyltransferase (GNAT) domain, PanZ BF17_09180 PF13458 Periplasmic binding protein BF17_09185 PF02653 Branched-chain amino acid transport system / permease component BF17_09190 PF02653 Branched-chain amino acid transport system / permease component BF17_09190 PF11862 Domain of unknown function (DUF3382) BF17_09195 PF12399 Branched-chain amino acid ATP-binding cassette transporter BF17_09195 PF00005 ABC transporter BF17_09200 PF00005 ABC transporter BF17_09240 PF13416 Bacterial extracellular solute-binding protein BF17_09245 PF00528 Binding-protein-dependent transport system inner membrane component BF17_09250 PF00528 Binding-protein-dependent transport system inner membrane component BF17_09255 PF17912 MalK OB fold domain BF17_09255 PF00005 ABC transporter BF17_09260 PF03009 Glycerophosphoryl diester phosphodiesterase family BF17_09280 PF00892 EamA-like transporter family BF17_09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_09285 PF03466 LysR substrate binding domain BF17_09290 PF08267 Cobalamin-independent synthase, N-terminal domain BF17_09290 PF01717 Cobalamin-independent synthase, Catalytic domain BF17_09295 PF01738 Dienelactone hydrolase family BF17_09300 PF01048 Phosphorylase superfamily BF17_09310 PF02554 Carbon starvation protein CstA BF17_09310 PF13722 5TM C-terminal transporter carbon starvation CstA BF17_09315 PF09335 SNARE associated Golgi protein BF17_09320 PF02646 RmuC family BF17_09325 PF01209 ubiE/COQ5 methyltransferase family BF17_09330 PF02036 SCP-2 sterol transfer family BF17_09335 PF03109 ABC1 family BF17_09340 PF02416 mttA/Hcf106 family BF17_09350 PF00902 Sec-independent protein translocase protein (TatC) BF17_09355 PF01026 TatD related DNase BF17_09360 PF00490 Delta-aminolevulinic acid dehydratase BF17_09365 PF02357 Transcription termination factor nusG BF17_09370 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BF17_09375 PF00175 Oxidoreductase NAD-binding domain BF17_09375 PF00970 Oxidoreductase FAD-binding domain BF17_09380 PF00108 Thiolase, N-terminal domain BF17_09380 PF02803 Thiolase, C-terminal domain BF17_09385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF17_09385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF17_09385 PF00378 Enoyl-CoA hydratase/isomerase BF17_09390 PF00557 Metallopeptidase family M24 BF17_09395 PF09186 Domain of unknown function (DUF1949) BF17_09395 PF01205 Uncharacterized protein family UPF0029 BF17_09400 PF02386 Cation transport protein BF17_09405 PF12724 Flavodoxin domain BF17_09435 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF17_09435 PF01565 FAD binding domain BF17_09440 PF02237 Biotin protein ligase C terminal domain BF17_09440 PF03099 Biotin/lipoate A/B protein ligase family BF17_09440 PF08279 HTH domain BF17_09445 PF00485 Phosphoribulokinase / Uridine kinase family BF17_09470 PF00009 Elongation factor Tu GTP binding domain BF17_09470 PF03143 Elongation factor Tu C-terminal domain BF17_09470 PF03144 Elongation factor Tu domain 2 BF17_09475 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BF17_09480 PF02357 Transcription termination factor nusG BF17_09480 PF00467 KOW motif BF17_09485 PF00298 Ribosomal protein L11, RNA binding domain BF17_09485 PF03946 Ribosomal protein L11, N-terminal domain BF17_09490 PF00687 Ribosomal protein L1p/L10e family BF17_09500 PF00466 Ribosomal protein L10 BF17_09510 PF04560 RNA polymerase Rpb2, domain 7 BF17_09510 PF04565 RNA polymerase Rpb2, domain 3 BF17_09510 PF04563 RNA polymerase beta subunit BF17_09510 PF10385 RNA polymerase beta subunit external 1 domain BF17_09510 PF04561 RNA polymerase Rpb2, domain 2 BF17_09510 PF00562 RNA polymerase Rpb2, domain 6 BF17_09515 PF05000 RNA polymerase Rpb1, domain 4 BF17_09515 PF00623 RNA polymerase Rpb1, domain 2 BF17_09515 PF04983 RNA polymerase Rpb1, domain 3 BF17_09515 PF04997 RNA polymerase Rpb1, domain 1 BF17_09515 PF04998 RNA polymerase Rpb1, domain 5 BF17_09520 PF04055 Radical SAM superfamily BF17_09520 PF06968 Biotin and Thiamin Synthesis associated domain BF17_09525 PF05690 Thiazole biosynthesis protein ThiG BF17_09530 PF02597 ThiS family BF17_09535 PF00899 ThiF family BF17_09540 PF02581 Thiamine monophosphate synthase BF17_09545 PF13667 ThiC-associated domain BF17_09545 PF01964 Radical SAM ThiC family BF17_09550 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BF17_09555 PF09297 NADH pyrophosphatase zinc ribbon domain BF17_09555 PF00293 NUDIX domain BF17_09560 PF01208 Uroporphyrinogen decarboxylase (URO-D) BF17_09565 PF04493 Endonuclease V BF17_09570 PF04222 Protein of unknown function (DUF416) BF17_09575 PF00216 Bacterial DNA-binding protein BF17_09580 PF07356 Protein of unknown function (DUF1481) BF17_09585 PF02843 Phosphoribosylglycinamide synthetase, C domain BF17_09585 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BF17_09585 PF02844 Phosphoribosylglycinamide synthetase, N domain BF17_09590 PF01808 AICARFT/IMPCHase bienzyme BF17_09590 PF02142 MGS-like domain BF17_09645 PF00474 Sodium:solute symporter family BF17_09650 PF04341 Protein of unknown function, DUF485 BF17_09655 PF13193 AMP-binding enzyme C-terminal domain BF17_09655 PF16177 Acetyl-coenzyme A synthetase N-terminus BF17_09655 PF00501 AMP-binding enzyme BF17_09660 PF00375 Sodium:dicarboxylate symporter family BF17_09665 PF00196 Bacterial regulatory proteins, luxR family BF17_09665 PF00072 Response regulator receiver domain BF17_09695 PF14525 AraC-binding-like domain BF17_09695 PF12833 Helix-turn-helix domain BF17_09715 PF01514 Secretory protein of YscJ/FliF family BF17_09730 PF00771 FHIPEP family BF17_09735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF17_09735 PF18269 T3SS EscN ATPase C-terminal domain BF17_09750 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF17_09760 PF01313 Bacterial export proteins, family 3 BF17_09765 PF01311 Bacterial export proteins, family 1 BF17_09770 PF01312 FlhB HrpN YscU SpaS Family BF17_09780 PF04143 Sulphur transport BF17_09785 PF01206 Sulfurtransferase TusA BF17_09795 PF00005 ABC transporter BF17_09800 PF01032 FecCD transport family BF17_09805 PF01497 Periplasmic binding protein BF17_09810 PF05171 Haemin-degrading HemS.ChuX domain BF17_09815 PF00593 TonB dependent receptor BF17_09815 PF07715 TonB-dependent Receptor Plug Domain BF17_09820 PF10636 Hemin uptake protein hemP BF17_09825 PF13460 NAD(P)H-binding BF17_09830 PF06228 Haem utilisation ChuX/HutX BF17_09835 PF04055 Radical SAM superfamily BF17_09855 PF15608 PELOTA RNA binding domain BF17_09855 PF11202 Phosphoribosyl transferase (PRTase) BF17_09875 PF02342 TerD domain BF17_09880 PF02342 TerD domain BF17_09885 PF05099 Tellurite resistance protein TerB BF17_09890 PF03741 Integral membrane protein TerC family BF17_09895 PF02342 TerD domain BF17_09900 PF02342 TerD domain BF17_09910 PF13954 PapC N-terminal domain BF17_09910 PF13953 PapC C-terminal domain BF17_09910 PF00577 Outer membrane usher protein BF17_09915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_09925 PF08031 Berberine and berberine like BF17_09925 PF01565 FAD binding domain BF17_09930 PF12951 Passenger-associated-transport-repeat BF17_09935 PF04345 Chorismate lyase BF17_09940 PF01040 UbiA prenyltransferase family BF17_09945 PF01553 Acyltransferase BF17_09950 PF01219 Prokaryotic diacylglycerol kinase BF17_09955 PF00717 Peptidase S24-like BF17_09955 PF01726 LexA DNA binding domain BF17_09960 PF01475 Ferric uptake regulator family BF17_09965 PF01207 Dihydrouridine synthase (Dus) BF17_09970 PF09583 Phage shock protein G (Phageshock_PspG) BF17_09975 PF00107 Zinc-binding dehydrogenase BF17_09975 PF08240 Alcohol dehydrogenase GroES-like domain BF17_09980 PF00772 DnaB-like helicase N terminal domain BF17_09980 PF03796 DnaB-like helicase C terminal domain BF17_09985 PF01168 Alanine racemase, N-terminal domain BF17_09985 PF00842 Alanine racemase, C-terminal domain BF17_09990 PF00155 Aminotransferase class I and II BF17_09995 PF04237 YjbR BF17_10000 PF17755 UvrA DNA-binding domain BF17_10000 PF00005 ABC transporter BF17_10000 PF17760 UvrA interaction domain BF17_10005 PF00436 Single-strand binding protein family BF17_10040 PF05336 L-rhamnose mutarotase BF17_10045 PF13276 HTH-like domain BF17_10045 PF13683 Integrase core domain BF17_10050 PF01527 Transposase BF17_10055 PF00465 Iron-containing alcohol dehydrogenase BF17_10060 PF00596 Class II Aldolase and Adducin N-terminal domain BF17_10065 PF06134 L-rhamnose isomerase (RhaA) BF17_10070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF17_10070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF17_10080 PF02311 AraC-like ligand binding domain BF17_10080 PF12833 Helix-turn-helix domain BF17_10085 PF12833 Helix-turn-helix domain BF17_10085 PF02311 AraC-like ligand binding domain BF17_10090 PF06379 L-rhamnose-proton symport protein (RhaT) BF17_10100 PF04703 FaeA-like protein BF17_10115 PF00577 Outer membrane usher protein BF17_10115 PF13954 PapC N-terminal domain BF17_10120 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_10120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_10145 PF13505 Outer membrane protein beta-barrel domain BF17_10175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BF17_10175 PF13247 4Fe-4S dicluster domain BF17_10175 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_10180 PF12800 4Fe-4S binding domain BF17_10180 PF13247 4Fe-4S dicluster domain BF17_10185 PF01568 Molydopterin dinucleotide binding domain BF17_10185 PF00384 Molybdopterin oxidoreductase BF17_10185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF17_10190 PF02683 Cytochrome C biogenesis protein transmembrane region BF17_10190 PF11412 Disulphide bond corrector protein DsbC BF17_10195 PF03091 CutA1 divalent ion tolerance protein BF17_10205 PF10415 Fumarase C C-terminus BF17_10205 PF00206 Lyase BF17_10210 PF04186 FxsA cytoplasmic membrane protein BF17_10215 PF00166 Chaperonin 10 Kd subunit BF17_10220 PF00118 TCP-1/cpn60 chaperonin family BF17_10225 PF13698 Domain of unknown function (DUF4156) BF17_10230 PF04055 Radical SAM superfamily BF17_10235 PF09285 Elongation factor P, C-terminal BF17_10235 PF08207 Elongation factor P (EF-P) KOW-like domain BF17_10235 PF01132 Elongation factor P (EF-P) OB domain BF17_10240 PF00893 Small Multidrug Resistance protein BF17_10250 PF02313 Fumarate reductase subunit D BF17_10255 PF02300 Fumarate reductase subunit C BF17_10260 PF13183 4Fe-4S dicluster domain BF17_10260 PF13085 2Fe-2S iron-sulfur cluster binding domain BF17_10265 PF00890 FAD binding domain BF17_10265 PF02910 Fumarate reductase flavoprotein C-term BF17_10270 PF00152 tRNA synthetases class II (D, K and N) BF17_10275 PF00924 Mechanosensitive ion channel BF17_10275 PF12795 Mechanosensitive ion channel porin domain BF17_10275 PF12794 Mechanosensitive ion channel inner membrane domain 1 BF17_10280 PF02666 Phosphatidylserine decarboxylase BF17_10285 PF03193 RsgA GTPase BF17_10290 PF00929 Exonuclease BF17_10310 PF08331 Domain of unknown function (DUF1730) BF17_10315 PF01256 Carbohydrate kinase BF17_10315 PF03853 YjeF-related protein N-terminus BF17_10320 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BF17_10325 PF01520 N-acetylmuramoyl-L-alanine amidase BF17_10330 PF01119 DNA mismatch repair protein, C-terminal domain BF17_10330 PF08676 MutL C terminal dimerisation domain BF17_10340 PF17209 Hfq protein BF17_10345 PF01926 50S ribosome-binding GTPase BF17_10345 PF13167 GTP-binding GTPase N-terminal BF17_10345 PF16360 GTP-binding GTPase Middle Region BF17_10350 PF01145 SPFH domain / Band 7 family BF17_10350 PF12221 Bacterial membrane protein N terminal BF17_10355 PF01145 SPFH domain / Band 7 family BF17_10360 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BF17_10365 PF00709 Adenylosuccinate synthetase BF17_10370 PF02082 Transcriptional regulator BF17_10375 PF17876 Cold shock domain BF17_10375 PF08461 Ribonuclease R winged-helix domain BF17_10375 PF08206 Ribonuclease B OB domain BF17_10375 PF00773 RNB domain BF17_10375 PF00575 S1 RNA binding domain BF17_10380 PF00588 SpoU rRNA Methylase family BF17_10380 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF17_10385 PF02770 Acyl-CoA dehydrogenase, middle domain BF17_10385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF17_10385 PF18158 Adaptive response protein AidB N-terminal domain BF17_10390 PF07338 Protein of unknown function (DUF1471) BF17_10395 PF00326 Prolyl oligopeptidase family BF17_10400 PF01250 Ribosomal protein S6 BF17_10405 PF00436 Single-strand binding protein family BF17_10410 PF01084 Ribosomal protein S18 BF17_10415 PF01281 Ribosomal protein L9, N-terminal domain BF17_10415 PF03948 Ribosomal protein L9, C-terminal domain BF17_10425 PF04225 Opacity-associated protein A LysM-like domain BF17_10425 PF08525 Opacity-associated protein A N-terminal motif BF17_10435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BF17_10435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BF17_10440 PF01814 Hemerythrin HHE cation binding domain BF17_10440 PF04405 Domain of Unknown function (DUF542) BF17_10455 PF00459 Inositol monophosphatase family BF17_10460 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BF17_10465 PF06526 Protein of unknown function (DUF1107) BF17_10470 PF00571 CBS domain BF17_10470 PF01595 Cyclin M transmembrane N-terminal domain BF17_10470 PF03471 Transporter associated domain BF17_10475 PF01625 Peptide methionine sulfoxide reductase BF17_10480 PF07244 Surface antigen variable number repeat BF17_10480 PF17243 POTRA domain TamA domain 1 BF17_10480 PF01103 Surface antigen BF17_10485 PF04357 TamB, inner membrane protein subunit of TAM complex BF17_10490 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BF17_10495 PF00719 Inorganic pyrophosphatase BF17_10500 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BF17_10505 PF02875 Mur ligase family, glutamate ligase domain BF17_10505 PF08245 Mur ligase middle domain BF17_10505 PF01225 Mur ligase family, catalytic domain BF17_10510 PF01316 Arginine repressor, DNA binding domain BF17_10510 PF02863 Arginine repressor, C-terminal domain BF17_10515 PF00056 lactate/malate dehydrogenase, NAD binding domain BF17_10515 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF17_10520 PF13693 Winged helix-turn-helix DNA-binding BF17_10530 PF00348 Polyprenyl synthetase BF17_10535 PF00829 Ribosomal prokaryotic L21 protein BF17_10540 PF01016 Ribosomal L27 protein BF17_10545 PF00892 EamA-like transporter family BF17_10555 PF01527 Transposase BF17_10570 PF05638 Type VI secretion system effector, Hcp BF17_10585 PF01018 GTP1/OBG BF17_10585 PF01926 50S ribosome-binding GTPase BF17_10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_10590 PF00672 HAMP domain BF17_10590 PF00512 His Kinase A (phospho-acceptor) domain BF17_10595 PF00486 Transcriptional regulatory protein, C terminal BF17_10595 PF00072 Response regulator receiver domain BF17_10600 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BF17_10605 PF01272 Transcription elongation factor, GreA/GreB, C-term BF17_10605 PF03449 Transcription elongation factor, N-terminal BF17_10610 PF01985 CRS1 / YhbY (CRM) domain BF17_10615 PF01728 FtsJ-like methyltransferase BF17_10620 PF00004 ATPase family associated with various cellular activities (AAA) BF17_10620 PF01434 Peptidase family M41 BF17_10620 PF17862 AAA+ lid domain BF17_10620 PF06480 FtsH Extracellular BF17_10625 PF00809 Pterin binding enzyme BF17_10630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF17_10630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF17_10630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF17_10630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF17_10635 PF03840 Preprotein translocase SecG subunit BF17_10650 PF02576 RimP N-terminal domain BF17_10650 PF17384 RimP C-terminal SH3 domain BF17_10655 PF13184 NusA-like KH domain BF17_10655 PF00575 S1 RNA binding domain BF17_10655 PF08529 NusA N-terminal domain BF17_10660 PF03144 Elongation factor Tu domain 2 BF17_10660 PF11987 Translation-initiation factor 2 BF17_10660 PF04760 Translation initiation factor IF-2, N-terminal region BF17_10660 PF08364 Bacterial translation initiation factor IF-2 associated region BF17_10660 PF00009 Elongation factor Tu GTP binding domain BF17_10665 PF02033 Ribosome-binding factor A BF17_10670 PF01509 TruB family pseudouridylate synthase (N terminal domain) BF17_10670 PF16198 tRNA pseudouridylate synthase B C-terminal domain BF17_10670 PF09157 Pseudouridine synthase II TruB, C-terminal BF17_10675 PF00312 Ribosomal protein S15 BF17_10680 PF00013 KH domain BF17_10680 PF01138 3' exoribonuclease family, domain 1 BF17_10680 PF03725 3' exoribonuclease family, domain 2 BF17_10680 PF00575 S1 RNA binding domain BF17_10680 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BF17_10685 PF07719 Tetratricopeptide repeat BF17_10685 PF13181 Tetratricopeptide repeat BF17_10690 PF00271 Helicase conserved C-terminal domain BF17_10690 PF00270 DEAD/DEAH box helicase BF17_10690 PF03880 DbpA RNA binding domain BF17_10690 PF12343 Cold shock protein DEAD box A BF17_10695 PF00296 Luciferase-like monooxygenase BF17_10715 PF13508 Acetyltransferase (GNAT) domain BF17_10720 PF01541 GIY-YIG catalytic domain BF17_10735 PF13416 Bacterial extracellular solute-binding protein BF17_10745 PF00528 Binding-protein-dependent transport system inner membrane component BF17_10750 PF03459 TOBE domain BF17_10750 PF17912 MalK OB fold domain BF17_10750 PF00005 ABC transporter BF17_10770 PF13460 NAD(P)H-binding BF17_10775 PF12706 Beta-lactamase superfamily domain BF17_10785 PF07969 Amidohydrolase family BF17_10790 PF00005 ABC transporter BF17_10795 PF00005 ABC transporter BF17_10800 PF06007 Phosphonate metabolism protein PhnJ BF17_10805 PF05861 Bacterial phosphonate metabolism protein (PhnI) BF17_10810 PF05845 Bacterial phosphonate metabolism protein (PhnH) BF17_10815 PF06754 Phosphonate metabolism protein PhnG BF17_10820 PF07702 UTRA domain BF17_10820 PF00392 Bacterial regulatory proteins, gntR family BF17_10830 PF13597 Anaerobic ribonucleoside-triphosphate reductase BF17_10830 PF03477 ATP cone domain BF17_10835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF17_10835 PF00005 ABC transporter BF17_10840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF17_10840 PF00005 ABC transporter BF17_10845 PF12911 N-terminal TM domain of oligopeptide transport permease C BF17_10845 PF00528 Binding-protein-dependent transport system inner membrane component BF17_10850 PF00528 Binding-protein-dependent transport system inner membrane component BF17_10860 PF04074 YhcH/YjgK/YiaL BF17_10870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF17_10870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF17_10875 PF06877 Regulator of ribonuclease activity B BF17_10880 PF00583 Acetyltransferase (GNAT) family BF17_10885 PF00133 tRNA synthetases class I (I, L, M and V) BF17_10885 PF10458 Valyl tRNA synthetase tRNA binding arm BF17_10885 PF08264 Anticodon-binding domain of tRNA BF17_10890 PF04364 DNA polymerase III chi subunit, HolC BF17_10895 PF02789 Cytosol aminopeptidase family, N-terminal domain BF17_10895 PF00883 Cytosol aminopeptidase family, catalytic domain BF17_10900 PF03739 Lipopolysaccharide export system permease LptF/LptG BF17_10905 PF03739 Lipopolysaccharide export system permease LptF/LptG BF17_10915 PF13356 Arm DNA-binding domain BF17_10915 PF00589 Phage integrase family BF17_10920 PF05638 Type VI secretion system effector, Hcp BF17_10965 PF05987 Bacterial protein of unknown function (DUF898) BF17_10975 PF10696 Protein of unknown function (DUF2501) BF17_10980 PF01970 Tripartite tricarboxylate transporter TctA family BF17_10995 PF00486 Transcriptional regulatory protein, C terminal BF17_10995 PF00072 Response regulator receiver domain BF17_11000 PF00512 His Kinase A (phospho-acceptor) domain BF17_11000 PF08521 Two-component sensor kinase N-terminal BF17_11000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_11010 PF03992 Antibiotic biosynthesis monooxygenase BF17_11015 PF01791 DeoC/LacD family aldolase BF17_11020 PF13407 Periplasmic binding protein domain BF17_11025 PF02653 Branched-chain amino acid transport system / permease component BF17_11030 PF02653 Branched-chain amino acid transport system / permease component BF17_11035 PF00005 ABC transporter BF17_11040 PF00325 Bacterial regulatory proteins, crp family BF17_11040 PF04198 Putative sugar-binding domain BF17_11045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF17_11045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF17_11050 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BF17_11065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BF17_11070 PF00873 AcrB/AcrD/AcrF family BF17_11085 PF00391 PEP-utilising enzyme, mobile domain BF17_11085 PF05524 PEP-utilising enzyme, N-terminal BF17_11085 PF00381 PTS HPr component phosphorylation site BF17_11085 PF03610 PTS system fructose IIA component BF17_11105 PF01095 Pectinesterase BF17_11110 PF00990 Diguanylate cyclase, GGDEF domain BF17_11135 PF08468 Methyltransferase small domain N-terminal BF17_11135 PF05175 Methyltransferase small domain BF17_11140 PF03603 DNA polymerase III psi subunit BF17_11145 PF00583 Acetyltransferase (GNAT) family BF17_11150 PF16658 Class II release factor RF3, C-terminal domain BF17_11150 PF00009 Elongation factor Tu GTP binding domain BF17_11150 PF03144 Elongation factor Tu domain 2 BF17_11155 PF04972 BON domain BF17_11165 PF01734 Patatin-like phospholipase BF17_11170 PF01026 TatD related DNase BF17_11175 PF01773 Na+ dependent nucleoside transporter N-terminus BF17_11175 PF07670 Nucleoside recognition BF17_11175 PF07662 Na+ dependent nucleoside transporter C-terminus BF17_11180 PF01791 DeoC/LacD family aldolase BF17_11190 PF01676 Metalloenzyme superfamily BF17_11195 PF01048 Phosphorylase superfamily BF17_11200 PF10144 Bacterial virulence factor haemolysin BF17_11205 PF18429 Domain of unknown function (DUF5609) BF17_11210 PF18073 Rubredoxin metal binding domain BF17_11215 PF13521 AAA domain BF17_11215 PF01381 Helix-turn-helix BF17_11230 PF12848 ABC transporter BF17_11230 PF00005 ABC transporter BF17_11235 PF00691 OmpA family BF17_11240 PF17152 Periplasmic sensor domain BF17_11240 PF00990 Diguanylate cyclase, GGDEF domain BF17_11250 PF00689 Cation transporting ATPase, C-terminus BF17_11250 PF00690 Cation transporter/ATPase, N-terminus BF17_11255 PF14718 Soluble lytic murein transglycosylase L domain BF17_11255 PF01464 Transglycosylase SLT domain BF17_11260 PF01371 Trp repressor protein BF17_11265 PF01931 Protein of unknown function DUF84 BF17_11270 PF00300 Histidine phosphatase superfamily (branch 1) BF17_11275 PF12833 Helix-turn-helix domain BF17_11275 PF06445 GyrI-like small molecule binding domain BF17_11280 PF05981 CreA protein BF17_11285 PF00072 Response regulator receiver domain BF17_11285 PF00486 Transcriptional regulatory protein, C terminal BF17_11290 PF01842 ACT domain BF17_11290 PF03447 Homoserine dehydrogenase, NAD binding domain BF17_11290 PF00742 Homoserine dehydrogenase BF17_11290 PF00696 Amino acid kinase family BF17_11290 PF13840 ACT domain BF17_11295 PF08544 GHMP kinases C terminal BF17_11295 PF00288 GHMP kinases N terminal domain BF17_11300 PF00291 Pyridoxal-phosphate dependent enzyme BF17_11300 PF14821 Threonine synthase N terminus BF17_11305 PF03883 Peroxide stress protein YaaA BF17_11310 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF17_11315 PF00994 Probable molybdopterin binding domain BF17_11320 PF07690 Major Facilitator Superfamily BF17_11325 PF00030 Beta/Gamma crystallin BF17_11330 PF01184 GPR1/FUN34/yaaH family BF17_11335 PF00012 Hsp70 protein BF17_11340 PF00226 DnaJ domain BF17_11340 PF01556 DnaJ C terminal domain BF17_11340 PF00684 DnaJ central domain BF17_11345 PF06965 Na+/H+ antiporter 1 BF17_11350 PF03466 LysR substrate binding domain BF17_11350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_11355 PF01649 Ribosomal protein S20 BF17_11360 PF06574 FAD synthetase BF17_11360 PF01687 Riboflavin kinase BF17_11365 PF08264 Anticodon-binding domain of tRNA BF17_11365 PF00133 tRNA synthetases class I (I, L, M and V) BF17_11365 PF06827 Zinc finger found in FPG and IleRS BF17_11370 PF01252 Signal peptidase (SPase) II BF17_11375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BF17_11380 PF02401 LytB protein BF17_11385 PF01113 Dihydrodipicolinate reductase, N-terminus BF17_11385 PF05173 Dihydrodipicolinate reductase, C-terminus BF17_11390 PF00117 Glutamine amidotransferase class-I BF17_11390 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BF17_11395 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BF17_11395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF17_11395 PF02142 MGS-like domain BF17_11400 PF01810 LysE type translocator BF17_11405 PF06738 Putative threonine/serine exporter BF17_11410 PF12821 Threonine/Serine exporter, ThrE BF17_11415 PF00186 Dihydrofolate reductase BF17_11435 PF00149 Calcineurin-like phosphoesterase BF17_11440 PF04379 ApaG domain BF17_11445 PF00398 Ribosomal RNA adenine dimethylase BF17_11450 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BF17_11455 PF00639 PPIC-type PPIASE domain BF17_11455 PF09312 SurA N-terminal domain BF17_11460 PF03968 OstA-like protein BF17_11460 PF04453 LPS transport system D BF17_11465 PF05099 Tellurite resistance protein TerB BF17_11465 PF00226 DnaJ domain BF17_11470 PF00849 RNA pseudouridylate synthase BF17_11515 PF07724 AAA domain (Cdc48 subfamily) BF17_11515 PF17871 AAA lid domain BF17_11515 PF10431 C-terminal, D2-small domain, of ClpB protein BF17_11515 PF00004 ATPase family associated with various cellular activities (AAA) BF17_11520 PF04717 Type VI secretion system, phage-baseplate injector BF17_11560 PF00691 OmpA family BF17_11560 PF05736 OprF membrane domain BF17_11575 PF18337 RapA N-terminal Tudor like domain BF17_11575 PF00271 Helicase conserved C-terminal domain BF17_11575 PF12137 RNA polymerase recycling family C-terminal BF17_11575 PF18339 RapA N-terminal Tudor like domain 1 BF17_11575 PF00176 SNF2 family N-terminal domain BF17_11580 PF00136 DNA polymerase family B BF17_11580 PF03104 DNA polymerase family B, exonuclease domain BF17_11585 PF09335 SNARE associated Golgi protein BF17_11590 PF00005 ABC transporter BF17_11595 PF00528 Binding-protein-dependent transport system inner membrane component BF17_11620 PF12793 Sugar transport-related sRNA regulator N-term BF17_11620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF17_11625 PF07690 Major Facilitator Superfamily BF17_11630 PF00694 Aconitase C-terminal domain BF17_11635 PF00330 Aconitase family (aconitate hydratase) BF17_11640 PF00180 Isocitrate/isopropylmalate dehydrogenase BF17_11645 PF08502 LeuA allosteric (dimerisation) domain BF17_11645 PF00682 HMGL-like BF17_11650 PF03466 LysR substrate binding domain BF17_11650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_11660 PF00501 AMP-binding enzyme BF17_11665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF17_11665 PF00205 Thiamine pyrophosphate enzyme, central domain BF17_11665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF17_11670 PF10369 Small subunit of acetolactate synthase BF17_11675 PF00356 Bacterial regulatory proteins, lacI family BF17_11675 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF17_11680 PF06610 L-alanine exporter BF17_11685 PF02381 MraZ protein, putative antitoxin-like BF17_11690 PF01795 MraW methylase family BF17_11695 PF04999 Cell division protein FtsL BF17_11700 PF03717 Penicillin-binding Protein dimerisation domain BF17_11700 PF00905 Penicillin binding protein transpeptidase domain BF17_11705 PF01225 Mur ligase family, catalytic domain BF17_11705 PF02875 Mur ligase family, glutamate ligase domain BF17_11705 PF08245 Mur ligase middle domain BF17_11710 PF01225 Mur ligase family, catalytic domain BF17_11710 PF08245 Mur ligase middle domain BF17_11710 PF02875 Mur ligase family, glutamate ligase domain BF17_11715 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BF17_11715 PF00953 Glycosyl transferase family 4 BF17_11720 PF02875 Mur ligase family, glutamate ligase domain BF17_11720 PF08245 Mur ligase middle domain BF17_11725 PF01098 Cell cycle protein BF17_11730 PF03033 Glycosyltransferase family 28 N-terminal domain BF17_11730 PF04101 Glycosyltransferase family 28 C-terminal domain BF17_11735 PF01225 Mur ligase family, catalytic domain BF17_11735 PF02875 Mur ligase family, glutamate ligase domain BF17_11735 PF08245 Mur ligase middle domain BF17_11740 PF07478 D-ala D-ala ligase C-terminus BF17_11740 PF01820 D-ala D-ala ligase N-terminus BF17_11745 PF08478 POTRA domain, FtsQ-type BF17_11745 PF03799 Cell division protein FtsQ BF17_11750 PF02491 SHS2 domain inserted in FTSA BF17_11755 PF00091 Tubulin/FtsZ family, GTPase domain BF17_11755 PF12327 FtsZ family, C-terminal domain BF17_11760 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BF17_11770 PF06558 Secretion monitor precursor protein (SecM) BF17_11775 PF07517 SecA DEAD-like domain BF17_11775 PF02810 SEC-C motif BF17_11775 PF07516 SecA Wing and Scaffold domain BF17_11775 PF01043 SecA preprotein cross-linking domain BF17_11780 PF00293 NUDIX domain BF17_11785 PF03884 DNA gyrase inhibitor YacG BF17_11790 PF07072 Cell division protein BF17_11795 PF01121 Dephospho-CoA kinase BF17_11800 PF00478 IMP dehydrogenase / GMP reductase domain BF17_11805 PF00482 Type II secretion system (T2SS), protein F BF17_11810 PF00437 Type II/IV secretion system protein BF17_11810 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BF17_11815 PF07963 Prokaryotic N-terminal methylation motif BF17_11820 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BF17_11820 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BF17_11825 PF01510 N-acetylmuramoyl-L-alanine amidase BF17_11830 PF17113 Regulatory signalling modulator protein AmpE BF17_11835 PF00324 Amino acid permease BF17_11840 PF00392 Bacterial regulatory proteins, gntR family BF17_11840 PF07729 FCD domain BF17_11845 PF17831 Pyruvate dehydrogenase E1 component middle domain BF17_11845 PF00456 Transketolase, thiamine diphosphate binding domain BF17_11850 PF00364 Biotin-requiring enzyme BF17_11850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF17_11850 PF02817 e3 binding domain BF17_11855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF17_11855 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_11860 PF11791 Aconitate B N-terminal domain BF17_11860 PF00330 Aconitase family (aconitate hydratase) BF17_11860 PF06434 Aconitate hydratase 2 N-terminus BF17_11865 PF06062 Uncharacterised protein family (UPF0231) BF17_11870 PF00892 EamA-like transporter family BF17_11880 PF02675 S-adenosylmethionine decarboxylase BF17_11885 PF17284 Spermidine synthase tetramerisation domain BF17_11890 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) BF17_11895 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF17_11895 PF07732 Multicopper oxidase BF17_11895 PF07731 Multicopper oxidase BF17_11895 PF00394 Multicopper oxidase BF17_11905 PF00156 Phosphoribosyl transferase domain BF17_11910 PF00484 Carbonic anhydrase BF17_11915 PF00005 ABC transporter BF17_11920 PF01061 ABC-2 type transporter BF17_11925 PF01522 Polysaccharide deacetylase BF17_11930 PF02261 Aspartate decarboxylase BF17_11940 PF02569 Pantoate-beta-alanine ligase BF17_11945 PF02548 Ketopantoate hydroxymethyltransferase BF17_11950 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BF17_11955 PF12626 Polymerase A arginine-rich C-terminus BF17_11955 PF01743 Poly A polymerase head domain BF17_11955 PF12627 Probable RNA and SrmB- binding site of polymerase A BF17_11960 PF00749 tRNA synthetases class I (E and Q), catalytic domain BF17_11965 PF01258 Prokaryotic dksA/traR C4-type zinc finger BF17_11970 PF03749 Sugar fermentation stimulation protein RE domain BF17_11970 PF17746 SfsA N-terminal OB domain BF17_11975 PF02834 LigT like Phosphoesterase BF17_11980 PF04408 Helicase associated domain (HA2) BF17_11980 PF08482 ATP-dependent helicase C-terminal BF17_11980 PF00271 Helicase conserved C-terminal domain BF17_11980 PF00270 DEAD/DEAH box helicase BF17_11985 PF00912 Transglycosylase BF17_11985 PF14814 Bifunctional transglycosylase second domain BF17_11985 PF00905 Penicillin binding protein transpeptidase domain BF17_11985 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal BF17_11990 PF00005 ABC transporter BF17_11995 PF01497 Periplasmic binding protein BF17_12000 PF01032 FecCD transport family BF17_12005 PF00202 Aminotransferase class-III BF17_12010 PF00654 Voltage gated chloride channel BF17_12015 PF01521 Iron-sulphur cluster biosynthesis BF17_12020 PF03458 UPF0126 domain BF17_12025 PF01497 Periplasmic binding protein BF17_12030 PF01048 Phosphorylase superfamily BF17_12035 PF13286 Phosphohydrolase-associated domain BF17_12035 PF01966 HD domain BF17_12040 PF00595 PDZ domain BF17_12060 PF05958 tRNA (Uracil-5-)-methyltransferase BF17_12060 PF01938 TRAM domain BF17_12065 PF04607 Region found in RelA / SpoT proteins BF17_12065 PF13291 ACT domain BF17_12065 PF02824 TGS domain BF17_12070 PF03819 MazG nucleotide pyrophosphohydrolase domain BF17_12075 PF00117 Glutamine amidotransferase class-I BF17_12075 PF06418 CTP synthase N-terminus BF17_12080 PF00113 Enolase, C-terminal TIM barrel domain BF17_12080 PF03952 Enolase, N-terminal domain BF17_12085 PF00080 Copper/zinc superoxide dismutase (SODC) BF17_12090 PF04055 Radical SAM superfamily BF17_12095 PF01242 6-pyruvoyl tetrahydropterin synthase BF17_12100 PF00175 Oxidoreductase NAD-binding domain BF17_12100 PF00258 Flavodoxin BF17_12100 PF00667 FAD binding domain BF17_12105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF17_12105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF17_12110 PF01507 Phosphoadenosine phosphosulfate reductase family BF17_12125 PF14824 Sirohaem biosynthesis protein central BF17_12125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF17_12125 PF10414 Sirohaem synthase dimerisation region BF17_12130 PF01507 Phosphoadenosine phosphosulfate reductase family BF17_12135 PF00009 Elongation factor Tu GTP binding domain BF17_12145 PF12084 Protein of unknown function (DUF3561) BF17_12150 PF04977 Septum formation initiator BF17_12155 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BF17_12160 PF02542 YgbB family BF17_12165 PF01142 tRNA pseudouridine synthase D (TruD) BF17_12170 PF01975 Survival protein SurE BF17_12180 PF01551 Peptidase family M23 BF17_12180 PF01476 LysM domain BF17_12185 PF04545 Sigma-70, region 4 BF17_12185 PF04539 Sigma-70 region 3 BF17_12185 PF04542 Sigma-70 region 2 BF17_12185 PF00140 Sigma-70 factor, region 1.2 BF17_12190 PF05192 MutS domain III BF17_12190 PF05190 MutS family domain IV BF17_12190 PF00488 MutS domain V BF17_12190 PF01624 MutS domain I BF17_12190 PF05188 MutS domain II BF17_12215 PF03050 Transposase IS66 family BF17_12215 PF13005 zinc-finger binding domain of transposase IS66 BF17_12215 PF13817 IS66 C-terminal element BF17_12215 PF13007 Transposase C of IS166 homeodomain BF17_12220 PF01527 Transposase BF17_12225 PF13276 HTH-like domain BF17_12225 PF13683 Integrase core domain BF17_12240 PF02502 Ribose/Galactose Isomerase BF17_12245 PF00107 Zinc-binding dehydrogenase BF17_12245 PF08240 Alcohol dehydrogenase GroES-like domain BF17_12255 PF02733 Dak1 domain BF17_12260 PF02734 DAK2 domain BF17_12265 PF04198 Putative sugar-binding domain BF17_12265 PF13936 Helix-turn-helix domain BF17_12270 PF03960 ArsC family BF17_12280 PF01022 Bacterial regulatory protein, arsR family BF17_12295 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF17_12300 PF14376 Haem-binding domain BF17_12300 PF00034 Cytochrome c BF17_12300 PF03150 Di-haem cytochrome c peroxidase BF17_12310 PF00593 TonB dependent receptor BF17_12310 PF07715 TonB-dependent Receptor Plug Domain BF17_12320 PF00557 Metallopeptidase family M24 BF17_12330 PF05681 Fumarate hydratase (Fumerase) BF17_12330 PF05683 Fumarase C-terminus BF17_12335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF17_12335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF17_12340 PF01261 Xylose isomerase-like TIM barrel BF17_12345 PF02653 Branched-chain amino acid transport system / permease component BF17_12350 PF02653 Branched-chain amino acid transport system / permease component BF17_12355 PF00005 ABC transporter BF17_12365 PF00455 DeoR C terminal sensor domain BF17_12365 PF08220 DeoR-like helix-turn-helix domain BF17_12370 PF00596 Class II Aldolase and Adducin N-terminal domain BF17_12375 PF01568 Molydopterin dinucleotide binding domain BF17_12375 PF00384 Molybdopterin oxidoreductase BF17_12375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF17_12380 PF13247 4Fe-4S dicluster domain BF17_12380 PF12800 4Fe-4S binding domain BF17_12385 PF04976 DMSO reductase anchor subunit (DmsC) BF17_12390 PF02613 Nitrate reductase delta subunit BF17_12395 PF01292 Prokaryotic cytochrome b561 BF17_12400 PF07361 Cytochrome b562 BF17_12405 PF00141 Peroxidase BF17_12420 PF00005 ABC transporter BF17_12425 PF02653 Branched-chain amino acid transport system / permease component BF17_12430 PF00456 Transketolase, thiamine diphosphate binding domain BF17_12435 PF02779 Transketolase, pyrimidine binding domain BF17_12435 PF02780 Transketolase, C-terminal domain BF17_12440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF17_12440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF17_12455 PF07690 Major Facilitator Superfamily BF17_12460 PF02464 Competence-damaged protein BF17_12470 PF00154 recA bacterial DNA recombination protein BF17_12475 PF02631 RecX family BF17_12480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF17_12480 PF01411 tRNA synthetases class II (A) BF17_12480 PF02272 DHHA1 domain BF17_12485 PF02599 Global regulator protein family BF17_12510 PF13419 Haloacid dehalogenase-like hydrolase BF17_12515 PF09335 SNARE associated Golgi protein BF17_12520 PF04262 Glutamate-cysteine ligase BF17_12525 PF02664 S-Ribosylhomocysteinase (LuxS) BF17_12530 PF01595 Cyclin M transmembrane N-terminal domain BF17_12530 PF00571 CBS domain BF17_12530 PF03471 Transporter associated domain BF17_12535 PF01578 Cytochrome C assembly protein BF17_12540 PF02978 Signal peptide binding domain BF17_12540 PF02881 SRP54-type protein, helical bundle domain BF17_12540 PF00448 SRP54-type protein, GTPase domain BF17_12545 PF00886 Ribosomal protein S16 BF17_12550 PF05239 PRC-barrel domain BF17_12550 PF01782 RimM N-terminal domain BF17_12555 PF01746 tRNA (Guanine-1)-methyltransferase BF17_12560 PF01245 Ribosomal protein L19 BF17_12565 PF04338 Protein of unknown function, DUF481 BF17_12570 PF03605 Anaerobic c4-dicarboxylate membrane transporter BF17_12575 PF04397 LytTr DNA-binding domain BF17_12575 PF00072 Response regulator receiver domain BF17_12580 PF00793 DAHP synthetase I family BF17_12585 PF02153 Prephenate dehydrogenase BF17_12585 PF01817 Chorismate mutase type II BF17_12590 PF00800 Prephenate dehydratase BF17_12590 PF01817 Chorismate mutase type II BF17_12595 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BF17_12600 PF13525 Outer membrane lipoprotein BF17_12605 PF00849 RNA pseudouridylate synthase BF17_12605 PF01479 S4 domain BF17_12615 PF00004 ATPase family associated with various cellular activities (AAA) BF17_12615 PF07724 AAA domain (Cdc48 subfamily) BF17_12615 PF17871 AAA lid domain BF17_12615 PF02861 Clp amino terminal domain, pathogenicity island component BF17_12615 PF10431 C-terminal, D2-small domain, of ClpB protein BF17_12655 PF10043 Predicted periplasmic lipoprotein (DUF2279) BF17_12660 PF13091 PLD-like domain BF17_12665 PF13380 CoA binding domain BF17_12665 PF13607 Succinyl-CoA ligase like flavodoxin domain BF17_12665 PF00583 Acetyltransferase (GNAT) family BF17_12675 PF00085 Thioredoxin BF17_12680 PF00588 SpoU rRNA Methylase family BF17_12680 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF17_12685 PF07690 Major Facilitator Superfamily BF17_12690 PF00529 HlyD membrane-fusion protein of T1SS BF17_12690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BF17_12695 PF01047 MarR family BF17_12700 PF05437 Branched-chain amino acid transport protein (AzlD) BF17_12705 PF03591 AzlC protein BF17_12710 PF01425 Amidase BF17_12725 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF17_12730 PF00528 Binding-protein-dependent transport system inner membrane component BF17_12740 PF00005 ABC transporter BF17_12745 PF00266 Aminotransferase class-V BF17_12750 PF07687 Peptidase dimerisation domain BF17_12750 PF01546 Peptidase family M20/M25/M40 BF17_12755 PF00795 Carbon-nitrogen hydrolase BF17_12760 PF00155 Aminotransferase class I and II BF17_12765 PF00596 Class II Aldolase and Adducin N-terminal domain BF17_12775 PF03079 ARD/ARD' family BF17_12780 PF01008 Initiation factor 2 subunit family BF17_12785 PF01636 Phosphotransferase enzyme family BF17_12790 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BF17_12790 PF08479 POTRA domain, ShlB-type BF17_12795 PF05860 haemagglutination activity domain BF17_12800 PF18071 HMW1C N-terminal BF17_12800 PF18254 HMW1 domain 2 BF17_12810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF17_12810 PF09317 Domain of unknown function (DUF1974) BF17_12810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF17_12815 PF13580 SIS domain BF17_12820 PF13230 Glutamine amidotransferases class-II BF17_12825 PF03734 L,D-transpeptidase catalytic domain BF17_12830 PF11973 NQRA C-terminal domain BF17_12830 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BF17_12835 PF03116 NQR2, RnfD, RnfE family BF17_12840 PF04205 FMN-binding domain BF17_12845 PF02508 Rnf-Nqr subunit, membrane protein BF17_12850 PF02508 Rnf-Nqr subunit, membrane protein BF17_12855 PF00970 Oxidoreductase FAD-binding domain BF17_12855 PF00175 Oxidoreductase NAD-binding domain BF17_12855 PF00111 2Fe-2S iron-sulfur cluster binding domain BF17_12860 PF02424 ApbE family BF17_12870 PF03009 Glycerophosphoryl diester phosphodiesterase family BF17_12875 PF11798 IMS family HHH motif BF17_12875 PF11799 impB/mucB/samB family C-terminal domain BF17_12875 PF00817 impB/mucB/samB family BF17_12880 PF07687 Peptidase dimerisation domain BF17_12880 PF01546 Peptidase family M20/M25/M40 BF17_12910 PF00156 Phosphoribosyl transferase domain BF17_12920 PF07417 Sigma factor-binding transcriptional regulator Crl BF17_12925 PF01472 PUA domain BF17_12925 PF00696 Amino acid kinase family BF17_12930 PF00171 Aldehyde dehydrogenase family BF17_12935 PF07238 PilZ domain BF17_12935 PF07317 Flagellar regulator YcgR BF17_12945 PF08241 Methyltransferase domain BF17_12960 PF01202 Shikimate kinase BF17_12965 PF06865 Pyrimidine/purine nucleoside phosphorylase BF17_12970 PF04381 Putative exonuclease, RdgC BF17_12975 PF00480 ROK family BF17_12980 PF13476 AAA domain BF17_12985 PF12320 Type 5 capsule protein repressor C-terminal domain BF17_12985 PF00149 Calcineurin-like phosphoesterase BF17_12990 PF00486 Transcriptional regulatory protein, C terminal BF17_12990 PF00072 Response regulator receiver domain BF17_12995 PF00989 PAS fold BF17_12995 PF00512 His Kinase A (phospho-acceptor) domain BF17_12995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_12995 PF11808 Phosphate regulon sensor protein PhoR BF17_13000 PF12849 PBP superfamily domain BF17_13005 PF05525 Branched-chain amino acid transport protein BF17_13010 PF00324 Amino acid permease BF17_13015 PF00128 Alpha amylase, catalytic domain BF17_13015 PF02903 Alpha amylase, N-terminal ig-like domain BF17_13030 PF00578 AhpC/TSA family BF17_13030 PF10417 C-terminal domain of 1-Cys peroxiredoxin BF17_13035 PF04336 Acyl carrier protein phosphodiesterase BF17_13040 PF02547 Queuosine biosynthesis protein BF17_13045 PF01702 Queuine tRNA-ribosyltransferase BF17_13050 PF02699 Preprotein translocase subunit BF17_13055 PF13721 SecD export protein N-terminal TM region BF17_13055 PF07549 SecD/SecF GG Motif BF17_13055 PF02355 Protein export membrane protein BF17_13060 PF07549 SecD/SecF GG Motif BF17_13060 PF02355 Protein export membrane protein BF17_13075 PF03477 ATP cone domain BF17_13080 PF01872 RibD C-terminal domain BF17_13080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF17_13085 PF00885 6,7-dimethyl-8-ribityllumazine synthase BF17_13090 PF01029 NusB family BF17_13095 PF02769 AIR synthase related protein, C-terminal domain BF17_13095 PF00586 AIR synthase related protein, N-terminal domain BF17_13100 PF04608 Phosphatidylglycerophosphatase A BF17_13105 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BF17_13105 PF02780 Transketolase, C-terminal domain BF17_13105 PF02779 Transketolase, pyrimidine binding domain BF17_13110 PF00348 Polyprenyl synthetase BF17_13115 PF02609 Exonuclease VII small subunit BF17_13120 PF02568 Thiamine biosynthesis protein (ThiI) BF17_13120 PF02926 THUMP domain BF17_13125 PF01965 DJ-1/PfpI family BF17_13130 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF17_13130 PF02558 Ketopantoate reductase PanE/ApbA BF17_13135 PF04461 Protein of unknown function (DUF520) BF17_13140 PF07690 Major Facilitator Superfamily BF17_13145 PF01040 UbiA prenyltransferase family BF17_13150 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BF17_13155 PF00510 Cytochrome c oxidase subunit III BF17_13160 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF17_13165 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BF17_13165 PF06481 COX Aromatic Rich Motif BF17_13170 PF03502 Nucleoside-specific channel-forming protein, Tsx BF17_13180 PF07690 Major Facilitator Superfamily BF17_13185 PF03923 Uncharacterized lipoprotein BF17_13185 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BF17_13190 PF01722 BolA-like protein BF17_13195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BF17_13195 PF05697 Bacterial trigger factor protein (TF) BF17_13195 PF05698 Bacterial trigger factor protein (TF) C-terminus BF17_13200 PF00574 Clp protease BF17_13205 PF10431 C-terminal, D2-small domain, of ClpB protein BF17_13205 PF06689 ClpX C4-type zinc finger BF17_13205 PF07724 AAA domain (Cdc48 subfamily) BF17_13210 PF02190 ATP-dependent protease La (LON) substrate-binding domain BF17_13210 PF05362 Lon protease (S16) C-terminal proteolytic domain BF17_13210 PF00004 ATPase family associated with various cellular activities (AAA) BF17_13215 PF00216 Bacterial DNA-binding protein BF17_13220 PF13145 PPIC-type PPIASE domain BF17_13235 PF06508 Queuosine biosynthesis protein QueC BF17_13240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF17_13240 PF12793 Sugar transport-related sRNA regulator N-term BF17_13250 PF00291 Pyridoxal-phosphate dependent enzyme BF17_13255 PF13404 AsnC-type helix-turn-helix domain BF17_13255 PF01037 Lrp/AsnC ligand binding domain BF17_13260 PF00005 ABC transporter BF17_13260 PF00664 ABC transporter transmembrane region BF17_13265 PF00664 ABC transporter transmembrane region BF17_13265 PF00005 ABC transporter BF17_13270 PF00543 Nitrogen regulatory protein P-II BF17_13275 PF00909 Ammonium Transporter Family BF17_13285 PF09619 Type III secretion system lipoprotein chaperone (YscW) BF17_13290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF17_13300 PF05321 Haemolysin expression modulating protein BF17_13305 PF10757 Biofilm formation regulator YbaJ BF17_13315 PF01197 Ribosomal protein L31 BF17_13320 PF00873 AcrB/AcrD/AcrF family BF17_13325 PF00529 HlyD membrane-fusion protein of T1SS BF17_13325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BF17_13330 PF00440 Bacterial regulatory proteins, tetR family BF17_13330 PF08361 MAATS-type transcriptional repressor, C-terminal region BF17_13335 PF02635 DsrE/DsrF-like family BF17_13340 PF12794 Mechanosensitive ion channel inner membrane domain 1 BF17_13340 PF00924 Mechanosensitive ion channel BF17_13340 PF12795 Mechanosensitive ion channel porin domain BF17_13355 PF04304 Protein of unknown function (DUF454) BF17_13360 PF00156 Phosphoribosyl transferase domain BF17_13365 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BF17_13365 PF12170 DNA polymerase III tau subunit V interacting with alpha BF17_13365 PF12169 DNA polymerase III subunits gamma and tau domain III BF17_13370 PF02575 YbaB/EbfC DNA-binding family BF17_13375 PF13662 Toprim domain BF17_13375 PF02132 RecR protein BF17_13380 PF00183 Hsp90 protein BF17_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_13385 PF05191 Adenylate kinase, active site lid BF17_13390 PF00762 Ferrochelatase BF17_13395 PF00970 Oxidoreductase FAD-binding domain BF17_13395 PF00111 2Fe-2S iron-sulfur cluster binding domain BF17_13395 PF00175 Oxidoreductase NAD-binding domain BF17_13400 PF00483 Nucleotidyl transferase BF17_13405 PF16363 GDP-mannose 4,6 dehydratase BF17_13410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF17_13415 PF00205 Thiamine pyrophosphate enzyme, central domain BF17_13415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF17_13415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF17_13430 PF01531 Glycosyl transferase family 11 BF17_13435 PF16363 GDP-mannose 4,6 dehydratase BF17_13440 PF01370 NAD dependent epimerase/dehydratase family BF17_13445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF17_13450 PF00483 Nucleotidyl transferase BF17_13450 PF01050 Mannose-6-phosphate isomerase BF17_13455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF17_13455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF17_13455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF17_13455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF17_13460 PF13592 Winged helix-turn helix BF17_13460 PF13358 DDE superfamily endonuclease BF17_13485 PF00535 Glycosyl transferase family 2 BF17_13490 PF02706 Chain length determinant protein BF17_13495 PF01370 NAD dependent epimerase/dehydratase family BF17_13500 PF00534 Glycosyl transferases group 1 BF17_13500 PF13439 Glycosyltransferase Family 4 BF17_13505 PF16363 GDP-mannose 4,6 dehydratase BF17_13510 PF00294 pfkB family carbohydrate kinase BF17_13525 PF07690 Major Facilitator Superfamily BF17_13530 PF00149 Calcineurin-like phosphoesterase BF17_13530 PF02872 5'-nucleotidase, C-terminal domain BF17_13540 PF04073 Aminoacyl-tRNA editing domain BF17_13545 PF01963 TraB family BF17_13550 PF00403 Heavy-metal-associated domain BF17_13555 PF13411 MerR HTH family regulatory protein BF17_13560 PF01957 NfeD-like C-terminal, partner-binding BF17_13565 PF16200 C-terminal region of band_7 BF17_13565 PF01145 SPFH domain / Band 7 family BF17_13570 PF00085 Thioredoxin BF17_13575 PF00106 short chain dehydrogenase BF17_13580 PF13472 GDSL-like Lipase/Acylhydrolase family BF17_13585 PF00005 ABC transporter BF17_13595 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BF17_13595 PF02222 ATP-grasp domain BF17_13600 PF00731 AIR carboxylase BF17_13605 PF00149 Calcineurin-like phosphoesterase BF17_13610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BF17_13615 PF09190 DALR domain BF17_13615 PF01406 tRNA synthetases class I (C) catalytic domain BF17_13625 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BF17_13625 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BF17_13670 PF02463 RecF/RecN/SMC N terminal domain BF17_13675 PF13361 UvrD-like helicase C-terminal domain BF17_13675 PF00580 UvrD/REP helicase N-terminal domain BF17_13680 PF13505 Outer membrane protein beta-barrel domain BF17_13705 PF01926 50S ribosome-binding GTPase BF17_13710 PF08220 DeoR-like helix-turn-helix domain BF17_13710 PF13280 WYL domain BF17_13730 PF06067 Domain of unknown function (DUF932) BF17_13735 PF03230 Antirestriction protein BF17_13740 PF04002 RadC-like JAB domain BF17_13750 PF06755 CbtA_toxin of type IV toxin-antitoxin system BF17_13755 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A BF17_13765 PF00589 Phage integrase family BF17_13815 PF01479 S4 domain BF17_13815 PF00849 RNA pseudouridylate synthase BF17_13820 PF08007 Cupin superfamily protein BF17_13840 PF16168 Adhesin of bacterial autotransporter system, probable stalk BF17_13840 PF03797 Autotransporter beta-domain BF17_13840 PF13018 Extended Signal Peptide of Type V secretion system BF17_13840 PF03212 Pertactin BF17_13855 PF05638 Type VI secretion system effector, Hcp BF17_13870 PF13693 Winged helix-turn-helix DNA-binding BF17_13875 PF00905 Penicillin binding protein transpeptidase domain BF17_13875 PF06832 Penicillin-Binding Protein C-terminus Family BF17_13875 PF00912 Transglycosylase BF17_13880 PF00207 Alpha-2-macroglobulin family BF17_13880 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BF17_13880 PF07703 Alpha-2-macroglobulin bait region domain BF17_13880 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BF17_13880 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BF17_13880 PF01835 MG2 domain BF17_13880 PF17962 Bacterial macroglobulin domain 6 BF17_13890 PF00171 Aldehyde dehydrogenase family BF17_13895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF17_13895 PF00205 Thiamine pyrophosphate enzyme, central domain BF17_13895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF17_13900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF17_13900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF17_13905 PF13407 Periplasmic binding protein domain BF17_13910 PF00005 ABC transporter BF17_13915 PF02653 Branched-chain amino acid transport system / permease component BF17_13920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF17_13920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF17_13925 PF00294 pfkB family carbohydrate kinase BF17_13930 PF01261 Xylose isomerase-like TIM barrel BF17_13935 PF04962 KduI/IolB family BF17_13945 PF00664 ABC transporter transmembrane region BF17_13945 PF00005 ABC transporter BF17_13965 PF01566 Natural resistance-associated macrophage protein BF17_13975 PF00196 Bacterial regulatory proteins, luxR family BF17_13980 PF00313 'Cold-shock' DNA-binding domain BF17_13990 PF00313 'Cold-shock' DNA-binding domain BF17_13995 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF17_14000 PF02416 mttA/Hcf106 family BF17_14005 PF04055 Radical SAM superfamily BF17_14005 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BF17_14010 PF03099 Biotin/lipoate A/B protein ligase family BF17_14015 PF04359 Protein of unknown function (DUF493) BF17_14020 PF00768 D-alanyl-D-alanine carboxypeptidase BF17_14020 PF07943 Penicillin-binding protein 5, C-terminal domain BF17_14025 PF03330 Lytic transglycolase BF17_14025 PF05036 Sporulation related domain BF17_14030 PF01098 Cell cycle protein BF17_14035 PF03717 Penicillin-binding Protein dimerisation domain BF17_14035 PF00905 Penicillin binding protein transpeptidase domain BF17_14040 PF02590 Predicted SPOUT methyltransferase BF17_14050 PF01467 Cytidylyltransferase-like BF17_14055 PF06144 DNA polymerase III, delta subunit BF17_14055 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BF17_14060 PF04390 Lipopolysaccharide-assembly BF17_14065 PF08264 Anticodon-binding domain of tRNA BF17_14065 PF00133 tRNA synthetases class I (I, L, M and V) BF17_14065 PF13603 Leucyl-tRNA synthetase, Domain 2 BF17_14070 PF07295 Zinc-ribbon containing domain BF17_14075 PF00005 ABC transporter BF17_14080 PF00528 Binding-protein-dependent transport system inner membrane component BF17_14085 PF00528 Binding-protein-dependent transport system inner membrane component BF17_14090 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF17_14095 PF00795 Carbon-nitrogen hydrolase BF17_14100 PF00571 CBS domain BF17_14100 PF03471 Transporter associated domain BF17_14105 PF02130 Uncharacterized protein family UPF0054 BF17_14110 PF02562 PhoH-like protein BF17_14115 PF01938 TRAM domain BF17_14115 PF00919 Uncharacterized protein family UPF0004 BF17_14115 PF04055 Radical SAM superfamily BF17_14120 PF01494 FAD binding domain BF17_14155 PF00733 Asparagine synthase BF17_14155 PF13537 Glutamine amidotransferase domain BF17_14160 PF13344 Haloacid dehalogenase-like hydrolase BF17_14165 PF01047 MarR family BF17_14165 PF00480 ROK family BF17_14170 PF01979 Amidohydrolase family BF17_14175 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BF17_14180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF17_14180 PF02378 Phosphotransferase system, EIIC BF17_14180 PF00367 phosphotransferase system, EIIB BF17_14185 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BF17_14185 PF00749 tRNA synthetases class I (E and Q), catalytic domain BF17_14190 PF03573 outer membrane porin, OprD family BF17_14195 PF02838 Glycosyl hydrolase family 20, domain 2 BF17_14195 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BF17_14195 PF03173 Putative carbohydrate binding domain BF17_14195 PF00728 Glycosyl hydrolase family 20, catalytic domain BF17_14205 PF01475 Ferric uptake regulator family BF17_14210 PF00258 Flavodoxin BF17_14215 PF01402 Ribbon-helix-helix protein, copG family BF17_14240 PF12167 Arm DNA-binding domain BF17_14240 PF00589 Phage integrase family BF17_14270 PF10065 Uncharacterized conserved protein (DUF2303) BF17_14325 PF05869 DNA N-6-adenine-methyltransferase (Dam) BF17_14340 PF03374 Phage antirepressor protein KilAC domain BF17_14340 PF09669 Phage regulatory protein Rha (Phage_pRha) BF17_14345 PF06147 Protein of unknown function (DUF968) BF17_14350 PF06530 Phage antitermination protein Q BF17_14515 PF08400 Prophage tail fibre N-terminal BF17_14515 PF03335 Phage tail fibre repeat BF17_14515 PF07484 Phage Tail Collar Domain BF17_14520 PF02413 Caudovirales tail fibre assembly protein, lambda gpK BF17_14525 PF01668 SmpB protein BF17_14530 PF03364 Polyketide cyclase / dehydrase and lipid transport BF17_14535 PF03658 RnfH family Ubiquitin BF17_14540 PF04355 SmpA / OmlA family BF17_14545 PF02463 RecF/RecN/SMC N terminal domain BF17_14550 PF01513 ATP-NAD kinase BF17_14555 PF01025 GrpE BF17_14560 PF00285 Citrate synthase, C-terminal domain BF17_14565 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BF17_14570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BF17_14575 PF02910 Fumarate reductase flavoprotein C-term BF17_14575 PF00890 FAD binding domain BF17_14580 PF13085 2Fe-2S iron-sulfur cluster binding domain BF17_14585 PF00676 Dehydrogenase E1 component BF17_14585 PF16078 2-oxoglutarate dehydrogenase N-terminus BF17_14585 PF02779 Transketolase, pyrimidine binding domain BF17_14585 PF16870 2-oxoglutarate dehydrogenase C-terminal BF17_14590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF17_14590 PF02817 e3 binding domain BF17_14590 PF00364 Biotin-requiring enzyme BF17_14595 PF00549 CoA-ligase BF17_14595 PF08442 ATP-grasp domain BF17_14600 PF00549 CoA-ligase BF17_14600 PF02629 CoA binding domain BF17_14605 PF01654 Cytochrome bd terminal oxidase subunit I BF17_14610 PF02322 Cytochrome bd terminal oxidase subunit II BF17_14615 PF08173 Membrane bound YbgT-like protein BF17_14620 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) BF17_14625 PF03061 Thioesterase superfamily BF17_14630 PF01618 MotA/TolQ/ExbB proton channel family BF17_14635 PF02472 Biopolymer transport protein ExbD/TolR BF17_14640 PF06519 TolA C-terminal BF17_14640 PF06519 TolA C-terminal BF17_14645 PF04052 TolB amino-terminal domain BF17_14645 PF07676 WD40-like Beta Propeller Repeat BF17_14650 PF00691 OmpA family BF17_14655 PF16331 TolA binding protein trimerisation BF17_14655 PF13174 Tetratricopeptide repeat BF17_14700 PF02445 Quinolinate synthetase A protein BF17_14705 PF04973 Nicotinamide mononucleotide transporter BF17_14710 PF01545 Cation efflux family BF17_14715 PF00793 DAHP synthetase I family BF17_14720 PF00300 Histidine phosphatase superfamily (branch 1) BF17_14730 PF01263 Aldose 1-epimerase BF17_14735 PF00288 GHMP kinases N terminal domain BF17_14735 PF08544 GHMP kinases C terminal BF17_14735 PF10509 Galactokinase galactose-binding signature BF17_14740 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BF17_14740 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BF17_14745 PF16363 GDP-mannose 4,6 dehydratase BF17_14760 PF00005 ABC transporter BF17_14765 PF03459 TOBE domain BF17_14765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_14770 PF10766 Multidrug efflux pump-associated protein AcrZ BF17_14780 PF00528 Binding-protein-dependent transport system inner membrane component BF17_14785 PF03459 TOBE domain BF17_14785 PF00005 ABC transporter BF17_14795 PF10282 Lactonase, 7-bladed beta-propeller BF17_14800 PF00202 Aminotransferase class-III BF17_14805 PF04055 Radical SAM superfamily BF17_14805 PF06968 Biotin and Thiamin Synthesis associated domain BF17_14815 PF08241 Methyltransferase domain BF17_14825 PF00005 ABC transporter BF17_14835 PF04851 Type III restriction enzyme, res subunit BF17_14835 PF00271 Helicase conserved C-terminal domain BF17_14835 PF12344 Ultra-violet resistance protein B BF17_14835 PF17757 UvrB interaction domain BF17_14835 PF02151 UvrB/uvrC motif BF17_14840 PF09905 DNA-binding protein VF530 BF17_14845 PF01933 Uncharacterised protein family UPF0052 BF17_14850 PF04055 Radical SAM superfamily BF17_14850 PF06463 Molybdenum Cofactor Synthesis C BF17_14855 PF01967 MoaC family BF17_14860 PF02597 ThiS family BF17_14865 PF02391 MoaE protein BF17_14870 PF01027 Inhibitor of apoptosis-promoting Bax1 BF17_14875 PF05199 GMC oxidoreductase BF17_14875 PF00732 GMC oxidoreductase BF17_14880 PF00171 Aldehyde dehydrogenase family BF17_14885 PF13977 BetI-type transcriptional repressor, C-terminal BF17_14885 PF00440 Bacterial regulatory proteins, tetR family BF17_14890 PF02028 BCCT, betaine/carnitine/choline family transporter BF17_14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_14895 PF03466 LysR substrate binding domain BF17_14905 PF01048 Phosphorylase superfamily BF17_14910 PF03825 Nucleoside H+ symporter BF17_14915 PF13801 Heavy-metal resistance BF17_14920 PF00512 His Kinase A (phospho-acceptor) domain BF17_14920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_14925 PF02954 Bacterial regulatory protein, Fis family BF17_14925 PF00072 Response regulator receiver domain BF17_14925 PF00158 Sigma-54 interaction domain BF17_14940 PF00005 ABC transporter BF17_14945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BF17_14950 PF09209 Tetracyclin repressor-like, C-terminal domain BF17_14950 PF00440 Bacterial regulatory proteins, tetR family BF17_14955 PF00270 DEAD/DEAH box helicase BF17_14955 PF00271 Helicase conserved C-terminal domain BF17_14960 PF01548 Transposase BF17_14960 PF02371 Transposase IS116/IS110/IS902 family BF17_14995 PF00271 Helicase conserved C-terminal domain BF17_14995 PF00270 DEAD/DEAH box helicase BF17_15005 PF01207 Dihydrouridine synthase (Dus) BF17_15020 PF00768 D-alanyl-D-alanine carboxypeptidase BF17_15025 PF01565 FAD binding domain BF17_15025 PF09330 D-lactate dehydrogenase, membrane binding BF17_15030 PF01928 CYTH domain BF17_15035 PF01844 HNH endonuclease BF17_15045 PF04226 Transglycosylase associated protein BF17_15050 PF00005 ABC transporter BF17_15060 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15065 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15070 PF07308 Protein of unknown function (DUF1456) BF17_15075 PF13458 Periplasmic binding protein BF17_15080 PF02653 Branched-chain amino acid transport system / permease component BF17_15085 PF02653 Branched-chain amino acid transport system / permease component BF17_15090 PF00005 ABC transporter BF17_15095 PF00005 ABC transporter BF17_15110 PF00581 Rhodanese-like domain BF17_15115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BF17_15120 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15125 PF00005 ABC transporter BF17_15130 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15135 PF13520 Amino acid permease BF17_15140 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BF17_15140 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF17_15140 PF01276 Orn/Lys/Arg decarboxylase, major domain BF17_15150 PF00892 EamA-like transporter family BF17_15160 PF00267 Gram-negative porin BF17_15165 PF06733 DEAD_2 BF17_15165 PF13307 Helicase C-terminal domain BF17_15185 PF07437 YfaZ precursor BF17_15190 PF03222 Tryptophan/tyrosine permease family BF17_15195 PF00994 Probable molybdopterin binding domain BF17_15200 PF03974 Ecotin BF17_15205 PF00111 2Fe-2S iron-sulfur cluster binding domain BF17_15210 PF00268 Ribonucleotide reductase, small chain BF17_15215 PF00317 Ribonucleotide reductase, all-alpha domain BF17_15215 PF03477 ATP cone domain BF17_15215 PF02867 Ribonucleotide reductase, barrel domain BF17_15225 PF00521 DNA gyrase/topoisomerase IV, subunit A BF17_15225 PF03989 DNA gyrase C-terminal domain, beta-propeller BF17_15235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_15235 PF00512 His Kinase A (phospho-acceptor) domain BF17_15235 PF09456 RcsC Alpha-Beta-Loop (ABL) BF17_15235 PF00072 Response regulator receiver domain BF17_15240 PF00072 Response regulator receiver domain BF17_15240 PF00196 Bacterial regulatory proteins, luxR family BF17_15245 PF01627 Hpt domain BF17_15245 PF16359 RcsD-ABL domain BF17_15245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_15250 PF07690 Major Facilitator Superfamily BF17_15260 PF00267 Gram-negative porin BF17_15285 PF00144 Beta-lactamase BF17_15295 PF12706 Beta-lactamase superfamily domain BF17_15300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF17_15300 PF02743 Cache domain BF17_15300 PF00672 HAMP domain BF17_15305 PF01278 Omptin family BF17_15310 PF06183 DinI-like family BF17_15315 PF00717 Peptidase S24-like BF17_15315 PF01381 Helix-turn-helix BF17_15320 PF06530 Phage antitermination protein Q BF17_15325 PF17042 Nucleotide-binding C-terminal domain BF17_15325 PF07005 Sugar-binding N-terminal domain BF17_15330 PF00596 Class II Aldolase and Adducin N-terminal domain BF17_15335 PF00455 DeoR C terminal sensor domain BF17_15335 PF08220 DeoR-like helix-turn-helix domain BF17_15365 PF04984 Phage tail sheath protein subtilisin-like domain BF17_15365 PF17482 Phage tail sheath C-terminal domain BF17_15405 PF04865 Baseplate J-like protein BF17_15415 PF07484 Phage Tail Collar Domain BF17_15420 PF01418 Helix-turn-helix domain, rpiR family BF17_15420 PF01380 SIS domain BF17_15430 PF00232 Glycosyl hydrolase family 1 BF17_15450 PF11893 Domain of unknown function (DUF3413) BF17_15450 PF00884 Sulfatase BF17_15455 PF07208 Protein of unknown function (DUF1414) BF17_15460 PF04245 37-kD nucleoid-associated bacterial protein BF17_15465 PF01386 Ribosomal L25p family BF17_15470 PF00271 Helicase conserved C-terminal domain BF17_15470 PF04851 Type III restriction enzyme, res subunit BF17_15475 PF01479 S4 domain BF17_15475 PF00849 RNA pseudouridylate synthase BF17_15480 PF07690 Major Facilitator Superfamily BF17_15485 PF13989 YejG-like protein BF17_15490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF17_15490 PF00005 ABC transporter BF17_15495 PF12911 N-terminal TM domain of oligopeptide transport permease C BF17_15495 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15500 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF17_15510 PF00563 EAL domain BF17_15510 PF12792 CSS motif domain associated with EAL BF17_15525 PF00877 NlpC/P60 family BF17_15530 PF01569 PAP2 superfamily BF17_15535 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF17_15535 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF17_15550 PF07729 FCD domain BF17_15550 PF00392 Bacterial regulatory proteins, gntR family BF17_15555 PF01232 Mannitol dehydrogenase Rossmann domain BF17_15555 PF08125 Mannitol dehydrogenase C-terminal domain BF17_15560 PF03786 D-mannonate dehydratase (UxuA) BF17_15565 PF09285 Elongation factor P, C-terminal BF17_15565 PF08207 Elongation factor P (EF-P) KOW-like domain BF17_15565 PF01132 Elongation factor P (EF-P) OB domain BF17_15570 PF03222 Tryptophan/tyrosine permease family BF17_15575 PF03692 Putative zinc- or iron-chelating domain BF17_15585 PF01842 ACT domain BF17_15585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF17_15585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF17_15595 PF00171 Aldehyde dehydrogenase family BF17_15600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF17_15600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF17_15605 PF13419 Haloacid dehalogenase-like hydrolase BF17_15615 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BF17_15625 PF00005 ABC transporter BF17_15630 PF02653 Branched-chain amino acid transport system / permease component BF17_15635 PF00293 NUDIX domain BF17_15635 PF13344 Haloacid dehalogenase-like hydrolase BF17_15640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF17_15640 PF00381 PTS HPr component phosphorylation site BF17_15645 PF00294 pfkB family carbohydrate kinase BF17_15650 PF02378 Phosphotransferase system, EIIC BF17_15650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF17_15655 PF00486 Transcriptional regulatory protein, C terminal BF17_15660 PF17550 Family of unknown function BF17_15670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_15670 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_15685 PF01261 Xylose isomerase-like TIM barrel BF17_15690 PF03601 Conserved hypothetical protein 698 BF17_15695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_15695 PF03466 LysR substrate binding domain BF17_15700 PF00324 Amino acid permease BF17_15710 PF01032 FecCD transport family BF17_15715 PF00005 ABC transporter BF17_15720 PF00593 TonB dependent receptor BF17_15720 PF07715 TonB-dependent Receptor Plug Domain BF17_15725 PF00043 Glutathione S-transferase, C-terminal domain BF17_15725 PF13417 Glutathione S-transferase, N-terminal domain BF17_15740 PF03180 NLPA lipoprotein BF17_15745 PF09383 NIL domain BF17_15745 PF00005 ABC transporter BF17_15750 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15755 PF07943 Penicillin-binding protein 5, C-terminal domain BF17_15755 PF00768 D-alanyl-D-alanine carboxypeptidase BF17_15775 PF08220 DeoR-like helix-turn-helix domain BF17_15775 PF00455 DeoR C terminal sensor domain BF17_15780 PF01791 DeoC/LacD family aldolase BF17_15785 PF01569 PAP2 superfamily BF17_15800 PF02080 TrkA-C domain BF17_15800 PF06826 Predicted Permease Membrane Region BF17_15805 PF00462 Glutaredoxin BF17_15815 PF07214 Protein of unknown function (DUF1418) BF17_15820 PF10722 Putative bacterial sensory transduction regulator BF17_15825 PF13416 Bacterial extracellular solute-binding protein BF17_15830 PF00005 ABC transporter BF17_15830 PF08402 TOBE domain BF17_15835 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15840 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15845 PF10767 Protein of unknown function (DUF2593) BF17_15850 PF05958 tRNA (Uracil-5-)-methyltransferase BF17_15855 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF17_15870 PF01526 Tn3 transposase DDE domain BF17_15870 PF13700 Domain of unknown function (DUF4158) BF17_15900 PF01032 FecCD transport family BF17_15905 PF00005 ABC transporter BF17_15910 PF03059 Nicotianamine synthase protein BF17_15915 PF10100 Staphylopine dehydrogenase BF17_15920 PF00892 EamA-like transporter family BF17_15925 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15930 PF00528 Binding-protein-dependent transport system inner membrane component BF17_15935 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF17_15940 PF00005 ABC transporter BF17_15945 PF01817 Chorismate mutase type II BF17_15950 PF12883 Protein of unknown function (DUF3828) BF17_15955 PF01370 NAD dependent epimerase/dehydratase family BF17_15960 PF11066 Protein of unknown function (DUF2867) BF17_15960 PF13460 NAD(P)H-binding BF17_15965 PF01212 Beta-eliminating lyase BF17_15970 PF00205 Thiamine pyrophosphate enzyme, central domain BF17_15970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF17_15970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF17_15975 PF00175 Oxidoreductase NAD-binding domain BF17_15975 PF00111 2Fe-2S iron-sulfur cluster binding domain BF17_15975 PF00970 Oxidoreductase FAD-binding domain BF17_15980 PF03063 Prismane/CO dehydrogenase family BF17_15985 PF03956 Lysine exporter LysO BF17_15990 PF11398 Protein of unknown function (DUF2813) BF17_15995 PF04393 Protein of unknown function (DUF535) BF17_16005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BF17_16010 PF12704 MacB-like periplasmic core domain BF17_16010 PF00005 ABC transporter BF17_16010 PF02687 FtsX-like permease family BF17_16015 PF00313 'Cold-shock' DNA-binding domain BF17_16020 PF02617 ATP-dependent Clp protease adaptor protein ClpS BF17_16025 PF02861 Clp amino terminal domain, pathogenicity island component BF17_16025 PF00004 ATPase family associated with various cellular activities (AAA) BF17_16025 PF10431 C-terminal, D2-small domain, of ClpB protein BF17_16025 PF07724 AAA domain (Cdc48 subfamily) BF17_16025 PF17871 AAA lid domain BF17_16030 PF01176 Translation initiation factor 1A / IF-1 BF17_16035 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BF17_16040 PF00005 ABC transporter BF17_16040 PF00664 ABC transporter transmembrane region BF17_16045 PF00005 ABC transporter BF17_16045 PF00664 ABC transporter transmembrane region BF17_16050 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_16055 PF01037 Lrp/AsnC ligand binding domain BF17_16070 PF03548 Outer membrane lipoprotein carrier protein LolA BF17_16075 PF00004 ATPase family associated with various cellular activities (AAA) BF17_16075 PF12002 MgsA AAA+ ATPase C terminal BF17_16075 PF16193 AAA C-terminal domain BF17_16080 PF02403 Seryl-tRNA synthetase N-terminal domain BF17_16080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF17_16085 PF07690 Major Facilitator Superfamily BF17_16090 PF04055 Radical SAM superfamily BF17_16100 PF02901 Pyruvate formate lyase-like BF17_16100 PF01228 Glycine radical BF17_16105 PF01226 Formate/nitrite transporter BF17_16110 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BF17_16110 PF18381 YcaO cyclodehydratase C-terminal domain BF17_16115 PF00710 Asparaginase, N-terminal BF17_16115 PF17763 Glutaminase/Asparaginase C-terminal domain BF17_16130 PF00266 Aminotransferase class-V BF17_16135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF17_16140 PF02224 Cytidylate kinase BF17_16145 PF00575 S1 RNA binding domain BF17_16150 PF00216 Bacterial DNA-binding protein BF17_16160 PF03772 Competence protein BF17_16160 PF00753 Metallo-beta-lactamase superfamily BF17_16165 PF00005 ABC transporter BF17_16165 PF00664 ABC transporter transmembrane region BF17_16170 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BF17_16175 PF07063 Domain of unknown function (DUF1338) BF17_16180 PF00313 'Cold-shock' DNA-binding domain BF17_16185 PF03966 Trm112p-like protein BF17_16190 PF02348 Cytidylyltransferase BF17_16195 PF01636 Phosphotransferase enzyme family BF17_16210 PF17193 MukF C-terminal domain BF17_16210 PF03882 MukF winged-helix domain BF17_16210 PF17192 MukF middle domain BF17_16215 PF04288 MukE-like family BF17_16220 PF04310 MukB N-terminal BF17_16220 PF16330 MukB hinge domain BF17_16270 PF01471 Putative peptidoglycan binding domain BF17_16270 PF03734 L,D-transpeptidase catalytic domain BF17_16275 PF05951 Bacterial protein of unknown function (DUF882) BF17_16280 PF00753 Metallo-beta-lactamase superfamily BF17_16285 PF00155 Aminotransferase class I and II BF17_16290 PF00267 Gram-negative porin BF17_16295 PF01336 OB-fold nucleic acid binding domain BF17_16295 PF00152 tRNA synthetases class II (D, K and N) BF17_16300 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BF17_16300 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BF17_16310 PF11940 Domain of unknown function (DUF3458) Ig-like fold BF17_16310 PF01433 Peptidase family M1 domain BF17_16310 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BF17_16315 PF01180 Dihydroorotate dehydrogenase BF17_16320 PF07126 Cell-division protein ZapC BF17_16325 PF03473 MOSC domain BF17_16325 PF03476 MOSC N-terminal beta barrel domain BF17_16325 PF00111 2Fe-2S iron-sulfur cluster binding domain BF17_16330 PF01170 Putative RNA methylase family UPF0020 BF17_16330 PF02926 THUMP domain BF17_16330 PF10672 S-adenosylmethionine-dependent methyltransferase BF17_16335 PF16326 ABC transporter C-terminal domain BF17_16335 PF12848 ABC transporter BF17_16335 PF00005 ABC transporter BF17_16340 PF04403 Paraquat-inducible protein A BF17_16345 PF02470 MlaD protein BF17_16350 PF03886 ABC-type transport auxiliary lipoprotein component BF17_16355 PF02801 Beta-ketoacyl synthase, C-terminal domain BF17_16355 PF00109 Beta-ketoacyl synthase, N-terminal domain BF17_16365 PF07977 FabA-like domain BF17_16370 PF13654 AAA domain BF17_16370 PF05362 Lon protease (S16) C-terminal proteolytic domain BF17_16375 PF06303 MatP N-terminal domain BF17_16375 PF17414 MatP C-terminal ribbon-helix-helix domain BF17_16380 PF00691 OmpA family BF17_16380 PF01389 OmpA-like transmembrane domain BF17_16385 PF03846 Cell division inhibitor SulA BF17_16390 PF04994 TfoX C-terminal domain BF17_16390 PF04993 TfoX N-terminal domain BF17_16395 PF12805 FUSC-like inner membrane protein yccS BF17_16400 PF03733 Inner membrane component domain BF17_16405 PF12462 DNA helicase IV / RNA helicase N terminal BF17_16405 PF00580 UvrD/REP helicase N-terminal domain BF17_16405 PF13361 UvrD-like helicase C-terminal domain BF17_16410 PF02142 MGS-like domain BF17_16415 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BF17_16420 PF13380 CoA binding domain BF17_16425 PF08755 Hemimethylated DNA-binding protein YccV like BF17_16430 PF17785 PUA-like domain BF17_16430 PF10672 S-adenosylmethionine-dependent methyltransferase BF17_16435 PF00589 Phage integrase family BF17_16435 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain BF17_16495 PF00436 Single-strand binding protein family BF17_16665 PF07927 HicA toxin of bacterial toxin-antitoxin, BF17_16670 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system BF17_16800 PF00708 Acylphosphatase BF17_16805 PF04358 DsrC like protein BF17_16820 PF07977 FabA-like domain BF17_16825 PF00109 Beta-ketoacyl synthase, N-terminal domain BF17_16825 PF02801 Beta-ketoacyl synthase, C-terminal domain BF17_16835 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal BF17_16835 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal BF17_16845 PF00378 Enoyl-CoA hydratase/isomerase BF17_16860 PF00550 Phosphopantetheine attachment site BF17_16865 PF03060 Nitronate monooxygenase BF17_16865 PF00698 Acyl transferase domain BF17_16880 PF00005 ABC transporter BF17_16880 PF12848 ABC transporter BF17_16890 PF00899 ThiF family BF17_16895 PF00994 Probable molybdopterin binding domain BF17_16895 PF03453 MoeA N-terminal region (domain I and II) BF17_16895 PF03454 MoeA C-terminal region (domain IV) BF17_16900 PF00083 Sugar (and other) transporter BF17_16910 PF00005 ABC transporter BF17_16915 PF13533 Biotin-lipoyl like BF17_16930 PF00756 Putative esterase BF17_16935 PF08240 Alcohol dehydrogenase GroES-like domain BF17_16935 PF00107 Zinc-binding dehydrogenase BF17_16940 PF03466 LysR substrate binding domain BF17_16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_16945 PF06779 Uncharacterised MFS-type transporter YbfB BF17_16950 PF01227 GTP cyclohydrolase I BF17_16955 PF04235 Protein of unknown function (DUF418) BF17_16960 PF13407 Periplasmic binding protein domain BF17_16965 PF00005 ABC transporter BF17_16970 PF02653 Branched-chain amino acid transport system / permease component BF17_16975 PF02698 DUF218 domain BF17_16980 PF03949 Malic enzyme, NAD binding domain BF17_16980 PF00390 Malic enzyme, N-terminal domain BF17_16985 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BF17_16985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF17_16990 PF04172 LrgB-like family BF17_16995 PF03788 LrgA family BF17_17000 PF07690 Major Facilitator Superfamily BF17_17020 PF09334 tRNA synthetases class I (M) BF17_17020 PF01588 Putative tRNA binding domain BF17_17025 PF10609 NUBPL iron-transfer P-loop NTPase BF17_17030 PF00485 Phosphoribulokinase / Uridine kinase family BF17_17035 PF00692 dUTPase BF17_17040 PF05170 AsmA family BF17_17045 PF00571 CBS domain BF17_17045 PF03471 Transporter associated domain BF17_17045 PF03741 Integral membrane protein TerC family BF17_17050 PF11575 FhuF 2Fe-2S C-terminal domain BF17_17050 PF06276 Ferric iron reductase FhuF-like transporter BF17_17055 PF00282 Pyridoxal-dependent decarboxylase conserved domain BF17_17060 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BF17_17070 PF04183 IucA / IucC family BF17_17070 PF06276 Ferric iron reductase FhuF-like transporter BF17_17075 PF00005 ABC transporter BF17_17080 PF01032 FecCD transport family BF17_17085 PF01032 FecCD transport family BF17_17090 PF01497 Periplasmic binding protein BF17_17095 PF07660 Secretin and TonB N terminus short domain BF17_17095 PF00593 TonB dependent receptor BF17_17095 PF07715 TonB-dependent Receptor Plug Domain BF17_17100 PF06276 Ferric iron reductase FhuF-like transporter BF17_17100 PF04183 IucA / IucC family BF17_17110 PF00483 Nucleotidyl transferase BF17_17115 PF00483 Nucleotidyl transferase BF17_17120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF17_17120 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF17_17125 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BF17_17125 PF01502 Phosphoribosyl-AMP cyclohydrolase BF17_17130 PF00977 Histidine biosynthesis protein BF17_17135 PF00977 Histidine biosynthesis protein BF17_17140 PF00117 Glutamine amidotransferase class-I BF17_17145 PF00475 Imidazoleglycerol-phosphate dehydratase BF17_17150 PF00155 Aminotransferase class I and II BF17_17155 PF00815 Histidinol dehydrogenase BF17_17160 PF08029 HisG, C-terminal domain BF17_17160 PF01634 ATP phosphoribosyltransferase BF17_17165 PF01370 NAD dependent epimerase/dehydratase family BF17_17175 PF02653 Branched-chain amino acid transport system / permease component BF17_17180 PF00005 ABC transporter BF17_17185 PF00465 Iron-containing alcohol dehydrogenase BF17_17195 PF13520 Amino acid permease BF17_17200 PF00929 Exonuclease BF17_17200 PF08411 Exonuclease C-terminal BF17_17210 PF04363 Protein of unknown function (DUF496) BF17_17215 PF02369 Bacterial Ig-like domain (group 1) BF17_17215 PF11924 Inverse autotransporter, beta-domain BF17_17215 PF09134 Invasin, domain 3 BF17_17225 PF07690 Major Facilitator Superfamily BF17_17230 PF04134 Protein of unknown function, DUF393 BF17_17245 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF17_17250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF17_17250 PF13378 Enolase C-terminal domain-like BF17_17260 PF01070 FMN-dependent dehydrogenase BF17_17265 PF00764 Arginosuccinate synthase BF17_17270 PF01554 MatE BF17_17280 PF01522 Polysaccharide deacetylase BF17_17290 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BF17_17305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BF17_17315 PF03480 Bacterial extracellular solute-binding protein, family 7 BF17_17320 PF01648 4'-phosphopantetheinyl transferase superfamily BF17_17320 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BF17_17330 PF06167 Glucose-regulated metallo-peptidase M90 BF17_17345 PF00664 ABC transporter transmembrane region BF17_17345 PF00005 ABC transporter BF17_17360 PF12833 Helix-turn-helix domain BF17_17370 PF10964 Protein of unknown function (DUF2766) BF17_17375 PF13996 YobH-like protein BF17_17380 PF13974 YebO-like protein BF17_17400 PF00324 Amino acid permease BF17_17405 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP BF17_17410 PF00313 'Cold-shock' DNA-binding domain BF17_17420 PF13847 Methyltransferase domain BF17_17430 PF05231 MASE1 BF17_17430 PF00990 Diguanylate cyclase, GGDEF domain BF17_17430 PF08447 PAS fold BF17_17430 PF00563 EAL domain BF17_17430 PF08448 PAS fold BF17_17430 PF13426 PAS domain BF17_17435 PF07715 TonB-dependent Receptor Plug Domain BF17_17435 PF00593 TonB dependent receptor BF17_17440 PF02659 Putative manganese efflux pump BF17_17445 PF06173 Protein of unknown function (DUF986) BF17_17450 PF03613 PTS system mannose/fructose/sorbose family IID component BF17_17455 PF03609 PTS system sorbose-specific iic component BF17_17460 PF03830 PTS system sorbose subfamily IIB component BF17_17460 PF03610 PTS system fructose IIA component BF17_17465 PF03471 Transporter associated domain BF17_17465 PF03741 Integral membrane protein TerC family BF17_17480 PF00293 NUDIX domain BF17_17485 PF00425 chorismate binding enzyme BF17_17485 PF04715 Anthranilate synthase component I, N terminal region BF17_17490 PF03701 Uncharacterised protein family (UPF0181) BF17_17495 PF02222 ATP-grasp domain BF17_17500 PF00270 DEAD/DEAH box helicase BF17_17500 PF00271 Helicase conserved C-terminal domain BF17_17500 PF03880 DbpA RNA binding domain BF17_17505 PF07130 YebG protein BF17_17515 PF13995 YebF-like protein BF17_17520 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BF17_17520 PF00326 Prolyl oligopeptidase family BF17_17530 PF00561 alpha/beta hydrolase fold BF17_17535 PF06440 DNA polymerase III, theta subunit BF17_17540 PF00210 Ferritin-like domain BF17_17545 PF04234 CopC domain BF17_17550 PF05425 Copper resistance protein D BF17_17555 PF10709 Protein of unknown function (DUF2511) BF17_17585 PF01312 FlhB HrpN YscU SpaS Family BF17_17590 PF00771 FHIPEP family BF17_17595 PF06366 Flagellar protein FlhE BF17_17600 PF07979 Intimin C-type lectin domain BF17_17600 PF09134 Invasin, domain 3 BF17_17600 PF02369 Bacterial Ig-like domain (group 1) BF17_17600 PF11924 Inverse autotransporter, beta-domain BF17_17605 PF05130 FlgN protein BF17_17610 PF04316 Anti-sigma-28 factor, FlgM BF17_17615 PF13144 Chaperone for flagella basal body P-ring formation BF17_17615 PF17656 FlgA N-terminal domain BF17_17620 PF00460 Flagella basal body rod protein BF17_17625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF17_17625 PF00460 Flagella basal body rod protein BF17_17630 PF03963 Flagellar hook capping protein - N-terminal region BF17_17630 PF13860 FlgD Ig-like domain BF17_17630 PF13861 FlgD Tudor-like domain BF17_17635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF17_17635 PF00460 Flagella basal body rod protein BF17_17635 PF07559 Flagellar basal body protein FlaE BF17_17640 PF00460 Flagella basal body rod protein BF17_17640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF17_17645 PF00460 Flagella basal body rod protein BF17_17645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF17_17650 PF02107 Flagellar L-ring protein BF17_17655 PF02119 Flagellar P-ring protein BF17_17660 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BF17_17660 PF10135 Rod binding protein BF17_17665 PF00460 Flagella basal body rod protein BF17_17665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF17_17670 PF00669 Bacterial flagellin N-terminal helical region BF17_17675 PF04198 Putative sugar-binding domain BF17_17680 PF00596 Class II Aldolase and Adducin N-terminal domain BF17_17685 PF02653 Branched-chain amino acid transport system / permease component BF17_17690 PF13407 Periplasmic binding protein domain BF17_17695 PF00005 ABC transporter BF17_17700 PF02653 Branched-chain amino acid transport system / permease component BF17_17705 PF00294 pfkB family carbohydrate kinase BF17_17715 PF01311 Bacterial export proteins, family 1 BF17_17720 PF01313 Bacterial export proteins, family 3 BF17_17725 PF00813 FliP family BF17_17730 PF04347 Flagellar biosynthesis protein, FliO BF17_17735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF17_17735 PF16973 Flagellar motor switch protein FliN N-terminal BF17_17740 PF02154 Flagellar motor switch protein FliM BF17_17740 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF17_17745 PF03748 Flagellar basal body-associated protein FliL BF17_17750 PF02120 Flagellar hook-length control protein FliK BF17_17755 PF02050 Flagellar FliJ protein BF17_17760 PF18269 T3SS EscN ATPase C-terminal domain BF17_17760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF17_17765 PF02108 Flagellar assembly protein FliH BF17_17770 PF01706 FliG C-terminal domain BF17_17770 PF14842 FliG N-terminal domain BF17_17770 PF14841 FliG middle domain BF17_17775 PF01514 Secretory protein of YscJ/FliF family BF17_17775 PF08345 Flagellar M-ring protein C-terminal BF17_17780 PF02049 Flagellar hook-basal body complex protein FliE BF17_17800 PF00730 HhH-GPD superfamily base excision DNA repair protein BF17_17805 PF01966 HD domain BF17_17810 PF12833 Helix-turn-helix domain BF17_17815 PF05400 Flagellar protein FliT BF17_17820 PF02561 Flagellar protein FliS BF17_17825 PF02465 Flagellar hook-associated protein 2 N-terminus BF17_17825 PF07196 Flagellin hook IN motif BF17_17825 PF07195 Flagellar hook-associated protein 2 C-terminus BF17_17840 PF04542 Sigma-70 region 2 BF17_17840 PF04539 Sigma-70 region 3 BF17_17840 PF04545 Sigma-70, region 4 BF17_17845 PF02899 Phage integrase, N-terminal SAM-like domain BF17_17850 PF00291 Pyridoxal-phosphate dependent enzyme BF17_17885 PF01619 Proline dehydrogenase BF17_17885 PF00171 Aldehyde dehydrogenase family BF17_17885 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BF17_17885 PF14850 DNA-binding domain of Proline dehydrogenase BF17_17890 PF00474 Sodium:solute symporter family BF17_17895 PF03239 Iron permease FTR1 family BF17_17900 PF09375 Imelysin BF17_17900 PF13473 Cupredoxin-like domain BF17_17905 PF04261 Dyp-type peroxidase family BF17_17910 PF03358 NADPH-dependent FMN reductase BF17_17915 PF01344 Kelch motif BF17_17920 PF00324 Amino acid permease BF17_17930 PF13505 Outer membrane protein beta-barrel domain BF17_17940 PF10769 Protein of unknown function (DUF2594) BF17_17945 PF00072 Response regulator receiver domain BF17_17945 PF00196 Bacterial regulatory proteins, luxR family BF17_17950 PF02151 UvrB/uvrC motif BF17_17950 PF08459 UvrC Helix-hairpin-helix N-terminal BF17_17950 PF01541 GIY-YIG catalytic domain BF17_17955 PF01066 CDP-alcohol phosphatidyltransferase BF17_18090 PF00717 Peptidase S24-like BF17_18090 PF01381 Helix-turn-helix BF17_18120 PF04381 Putative exonuclease, RdgC BF17_18130 PF01555 DNA methylase BF17_18135 PF05869 DNA N-6-adenine-methyltransferase (Dam) BF17_18150 PF07102 Protein of unknown function (DUF1364) BF17_18165 PF10137 Predicted nucleotide-binding protein containing TIR-like domain BF17_18175 PF04971 Bacteriophage P21 holin S BF17_18180 PF00959 Phage lysozyme BF17_18260 PF02413 Caudovirales tail fibre assembly protein, lambda gpK BF17_18290 PF05638 Type VI secretion system effector, Hcp BF17_18295 PF01527 Transposase BF17_18300 PF13333 Integrase core domain BF17_18300 PF00665 Integrase core domain BF17_18300 PF13276 HTH-like domain BF17_18320 PF13358 DDE superfamily endonuclease BF17_18320 PF13592 Winged helix-turn helix BF17_18355 PF12951 Passenger-associated-transport-repeat BF17_18360 PF00873 AcrB/AcrD/AcrF family BF17_18370 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_18370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_18380 PF13954 PapC N-terminal domain BF17_18380 PF13953 PapC C-terminal domain BF17_18380 PF00577 Outer membrane usher protein BF17_18385 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_18385 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_18415 PF00196 Bacterial regulatory proteins, luxR family BF17_18415 PF00072 Response regulator receiver domain BF17_18430 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BF17_18430 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BF17_18435 PF01575 MaoC like domain BF17_18440 PF03328 HpcH/HpaI aldolase/citrate lyase family BF17_18445 PF03466 LysR substrate binding domain BF17_18445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_18460 PF02508 Rnf-Nqr subunit, membrane protein BF17_18465 PF00155 Aminotransferase class I and II BF17_18470 PF00324 Amino acid permease BF17_18475 PF08220 DeoR-like helix-turn-helix domain BF17_18475 PF00455 DeoR C terminal sensor domain BF17_18495 PF04960 Glutaminase BF17_18505 PF03239 Iron permease FTR1 family BF17_18510 PF10634 Fe2+ transport protein BF17_18520 PF02687 FtsX-like permease family BF17_18520 PF12704 MacB-like periplasmic core domain BF17_18520 PF00005 ABC transporter BF17_18530 PF02687 FtsX-like permease family BF17_18530 PF12704 MacB-like periplasmic core domain BF17_18530 PF00005 ABC transporter BF17_18535 PF00578 AhpC/TSA family BF17_18545 PF03848 Tellurite resistance protein TehB BF17_18545 PF09313 Domain of unknown function (DUF1971) BF17_18550 PF00557 Metallopeptidase family M24 BF17_18560 PF01522 Polysaccharide deacetylase BF17_18560 PF14883 Hypothetical glycosyl hydrolase family 13 BF17_18565 PF00535 Glycosyl transferase family 2 BF17_18590 PF02562 PhoH-like protein BF17_18595 PF01699 Sodium/calcium exchanger protein BF17_18600 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BF17_18600 PF07730 Histidine kinase BF17_18600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_18600 PF00672 HAMP domain BF17_18610 PF02322 Cytochrome bd terminal oxidase subunit II BF17_18615 PF01654 Cytochrome bd terminal oxidase subunit I BF17_18620 PF00155 Aminotransferase class I and II BF17_18620 PF00392 Bacterial regulatory proteins, gntR family BF17_18625 PF00202 Aminotransferase class-III BF17_18630 PF04958 Arginine N-succinyltransferase beta subunit BF17_18645 PF04996 Succinylarginine dihydrolase BF17_18650 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BF17_18655 PF00267 Gram-negative porin BF17_18670 PF01979 Amidohydrolase family BF17_18680 PF00392 Bacterial regulatory proteins, gntR family BF17_18680 PF07702 UTRA domain BF17_18690 PF05962 HutD BF17_18710 PF01370 NAD dependent epimerase/dehydratase family BF17_18745 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BF17_18795 PF08242 Methyltransferase domain BF17_18860 PF00512 His Kinase A (phospho-acceptor) domain BF17_18860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_18860 PF00672 HAMP domain BF17_18865 PF01527 Transposase BF17_18870 PF13333 Integrase core domain BF17_18870 PF00665 Integrase core domain BF17_18870 PF13276 HTH-like domain BF17_18880 PF00072 Response regulator receiver domain BF17_18880 PF00486 Transcriptional regulatory protein, C terminal BF17_18885 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BF17_18935 PF17854 FtsK alpha domain BF17_18935 PF09397 Ftsk gamma domain BF17_18935 PF01580 FtsK/SpoIIIE family BF17_18935 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BF17_18950 PF13693 Winged helix-turn-helix DNA-binding BF17_18970 PF04002 RadC-like JAB domain BF17_18975 PF00589 Phage integrase family BF17_18975 PF02899 Phage integrase, N-terminal SAM-like domain BF17_19020 PF00589 Phage integrase family BF17_19020 PF13356 Arm DNA-binding domain BF17_19025 PF06071 Protein of unknown function (DUF933) BF17_19025 PF01926 50S ribosome-binding GTPase BF17_19030 PF01195 Peptidyl-tRNA hydrolase BF17_19035 PF10762 Protein of unknown function (DUF2583) BF17_19045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BF17_19045 PF14572 Phosphoribosyl synthetase-associated domain BF17_19050 PF00288 GHMP kinases N terminal domain BF17_19050 PF08544 GHMP kinases C terminal BF17_19055 PF03550 Outer membrane lipoprotein LolB BF17_19060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BF17_19060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BF17_19060 PF01488 Shikimate / quinate 5-dehydrogenase BF17_19085 PF04247 Invasion gene expression up-regulator, SirB BF17_19090 PF13369 Transglutaminase-like superfamily BF17_19095 PF00793 DAHP synthetase I family BF17_19100 PF00916 Sulfate permease family BF17_19100 PF01740 STAS domain BF17_19115 PF03009 Glycerophosphoryl diester phosphodiesterase family BF17_19125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF17_19130 PF02811 PHP domain BF17_19135 PF02613 Nitrate reductase delta subunit BF17_19140 PF07273 Protein of unknown function (DUF1439) BF17_19145 PF07690 Major Facilitator Superfamily BF17_19150 PF13302 Acetyltransferase (GNAT) domain BF17_19155 PF04337 Protein of unknown function, DUF480 BF17_19160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF17_19165 PF03023 Lipid II flippase MurJ BF17_19170 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BF17_19170 PF08479 POTRA domain, ShlB-type BF17_19170 PF17287 POTRA domain BF17_19175 PF13332 Hemagglutinin repeat BF17_19175 PF05860 haemagglutination activity domain BF17_19180 PF00750 tRNA synthetases class I (R) BF17_19180 PF03485 Arginyl tRNA synthetase N terminal domain BF17_19180 PF05746 DALR anticodon binding domain BF17_19185 PF06185 YecM protein BF17_19190 PF03932 CutC family BF17_19195 PF08003 Protein of unknown function (DUF1698) BF17_19200 PF13649 Methyltransferase domain BF17_19205 PF01124 MAPEG family BF17_19210 PF01904 Protein of unknown function DUF72 BF17_19215 PF00152 tRNA synthetases class II (D, K and N) BF17_19215 PF02938 GAD domain BF17_19215 PF01336 OB-fold nucleic acid binding domain BF17_19220 PF00293 NUDIX domain BF17_19225 PF01709 Transcriptional regulator BF17_19230 PF02075 Crossover junction endodeoxyribonuclease RuvC BF17_19235 PF01330 RuvA N terminal domain BF17_19235 PF07499 RuvA, C-terminal domain BF17_19240 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF17_19240 PF05491 RuvB C-terminal winged helix domain BF17_19240 PF17864 RuvB AAA lid domain BF17_19245 PF00950 ABC 3 transport family BF17_19250 PF00005 ABC transporter BF17_19255 PF01297 Zinc-uptake complex component A periplasmic BF17_19260 PF08525 Opacity-associated protein A N-terminal motif BF17_19260 PF01476 LysM domain BF17_19260 PF01551 Peptidase family M23 BF17_19265 PF03279 Bacterial lipid A biosynthesis acyltransferase BF17_19270 PF00224 Pyruvate kinase, barrel domain BF17_19270 PF02887 Pyruvate kinase, alpha/beta domain BF17_19275 PF01380 SIS domain BF17_19275 PF01418 Helix-turn-helix domain, rpiR family BF17_19280 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BF17_19280 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BF17_19285 PF01081 KDPG and KHG aldolase BF17_19290 PF00893 Small Multidrug Resistance protein BF17_19295 PF00893 Small Multidrug Resistance protein BF17_19300 PF01042 Endoribonuclease L-PSP BF17_19305 PF04851 Type III restriction enzyme, res subunit BF17_19305 PF13307 Helicase C-terminal domain BF17_19310 PF00814 Glycoprotease family BF17_19315 PF03843 Outer membrane lipoprotein Slp family BF17_19320 PF13193 AMP-binding enzyme C-terminal domain BF17_19320 PF00501 AMP-binding enzyme BF17_19325 PF00570 HRDC domain BF17_19325 PF01612 3'-5' exonuclease BF17_19330 PF03776 Septum formation topological specificity factor MinE BF17_19335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BF17_19340 PF03775 Septum formation inhibitor MinC, C-terminal domain BF17_19340 PF05209 Septum formation inhibitor MinC, N-terminal domain BF17_19345 PF05166 YcgL domain BF17_19350 PF13406 Transglycosylase SLT domain BF17_19355 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF17_19360 PF03692 Putative zinc- or iron-chelating domain BF17_19370 PF00266 Aminotransferase class-V BF17_19390 PF02600 Disulfide bond formation protein DsbB BF17_19400 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BF17_19405 PF07840 FadR C-terminal domain BF17_19405 PF00392 Bacterial regulatory proteins, gntR family BF17_19410 PF04293 SpoVR like protein BF17_19415 PF01266 FAD dependent oxidoreductase BF17_19420 PF07690 Major Facilitator Superfamily BF17_19440 PF04285 Protein of unknown function (DUF444) BF17_19445 PF08298 PrkA AAA domain BF17_19445 PF06798 PrkA serine protein kinase C-terminal domain BF17_19450 PF06629 MltA-interacting protein MipA BF17_19455 PF01263 Aldose 1-epimerase BF17_19460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF17_19460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF17_19465 PF01641 SelR domain BF17_19470 PF07023 Protein of unknown function (DUF1315) BF17_19475 PF00857 Isochorismatase family BF17_19480 PF00710 Asparaginase, N-terminal BF17_19480 PF17763 Glutaminase/Asparaginase C-terminal domain BF17_19485 PF01343 Peptidase family S49 BF17_19490 PF00881 Nitroreductase family BF17_19495 PF00586 AIR synthase related protein, N-terminal domain BF17_19495 PF02769 AIR synthase related protein, C-terminal domain BF17_19500 PF01751 Toprim domain BF17_19500 PF01131 DNA topoisomerase BF17_19505 PF07383 Protein of unknown function (DUF1496) BF17_19510 PF00293 NUDIX domain BF17_19515 PF03372 Endonuclease/Exonuclease/phosphatase family BF17_19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_19520 PF03466 LysR substrate binding domain BF17_19535 PF01842 ACT domain BF17_19535 PF00551 Formyl transferase BF17_19540 PF02810 SEC-C motif BF17_19545 PF00072 Response regulator receiver domain BF17_19555 PF00816 H-NS histone family BF17_19560 PF01527 Transposase BF17_19565 PF13276 HTH-like domain BF17_19565 PF13683 Integrase core domain BF17_19570 PF00265 Thymidine kinase BF17_19575 PF00171 Aldehyde dehydrogenase family BF17_19575 PF00465 Iron-containing alcohol dehydrogenase BF17_19580 PF01914 MarC family integral membrane protein BF17_19585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF17_19590 PF00528 Binding-protein-dependent transport system inner membrane component BF17_19595 PF00528 Binding-protein-dependent transport system inner membrane component BF17_19595 PF12911 N-terminal TM domain of oligopeptide transport permease C BF17_19600 PF00005 ABC transporter BF17_19600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF17_19605 PF00005 ABC transporter BF17_19605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF17_19615 PF04269 Protein of unknown function, DUF440 BF17_19620 PF13091 PLD-like domain BF17_19620 PF13396 Phospholipase_D-nuclease N-terminal BF17_19630 PF03795 YCII-related domain BF17_19635 PF03544 Gram-negative bacterial TonB protein C-terminal BF17_19640 PF03061 Thioesterase superfamily BF17_19645 PF04279 Intracellular septation protein A BF17_19660 PF03922 OmpW family BF17_19670 PF00290 Tryptophan synthase alpha chain BF17_19675 PF00291 Pyridoxal-phosphate dependent enzyme BF17_19680 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BF17_19680 PF00218 Indole-3-glycerol phosphate synthase BF17_19685 PF00591 Glycosyl transferase family, a/b domain BF17_19685 PF02885 Glycosyl transferase family, helical bundle domain BF17_19690 PF00117 Glutamine amidotransferase class-I BF17_19695 PF04715 Anthranilate synthase component I, N terminal region BF17_19695 PF00425 chorismate binding enzyme BF17_19715 PF01300 Telomere recombination BF17_19720 PF01479 S4 domain BF17_19720 PF00849 RNA pseudouridylate synthase BF17_19725 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BF17_19725 PF12557 Cob(I)alamin adenosyltransferase N terminal BF17_19730 PF00106 short chain dehydrogenase BF17_19735 PF08496 Peptidase family S49 N-terminal BF17_19735 PF01343 Peptidase family S49 BF17_19740 PF10692 Protein of unknown function (DUF2498) BF17_19745 PF01751 Toprim domain BF17_19745 PF01131 DNA topoisomerase BF17_19745 PF08272 Topoisomerase I zinc-ribbon-like BF17_19745 PF01396 Topoisomerase DNA binding C4 zinc finger BF17_19750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_19750 PF03466 LysR substrate binding domain BF17_19760 PF00330 Aconitase family (aconitate hydratase) BF17_19760 PF00694 Aconitase C-terminal domain BF17_19765 PF00925 GTP cyclohydrolase II BF17_19770 PF01569 PAP2 superfamily BF17_19775 PF06305 Lipopolysaccharide assembly protein A domain BF17_19780 PF18073 Rubredoxin metal binding domain BF17_19790 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BF17_19795 PF01253 Translation initiation factor SUI1 BF17_19800 PF05433 Glycine zipper 2TM domain BF17_19805 PF00596 Class II Aldolase and Adducin N-terminal domain BF17_19820 PF04328 Selenoprotein, putative BF17_19825 PF02554 Carbon starvation protein CstA BF17_19825 PF13722 5TM C-terminal transporter carbon starvation CstA BF17_19835 PF17876 Cold shock domain BF17_19835 PF08206 Ribonuclease B OB domain BF17_19835 PF00575 S1 RNA binding domain BF17_19835 PF00773 RNB domain BF17_19840 PF07690 Major Facilitator Superfamily BF17_19845 PF01370 NAD dependent epimerase/dehydratase family BF17_19850 PF00730 HhH-GPD superfamily base excision DNA repair protein BF17_19850 PF10576 Iron-sulfur binding domain of endonuclease III BF17_19850 PF00633 Helix-hairpin-helix motif BF17_19855 PF02508 Rnf-Nqr subunit, membrane protein BF17_19860 PF04205 FMN-binding domain BF17_19865 PF03116 NQR2, RnfD, RnfE family BF17_19870 PF12833 Helix-turn-helix domain BF17_19870 PF06445 GyrI-like small molecule binding domain BF17_19880 PF04060 Putative Fe-S cluster BF17_19885 PF02508 Rnf-Nqr subunit, membrane protein BF17_19890 PF10754 Protein of unknown function (DUF2569) BF17_19895 PF03412 Peptidase C39 family BF17_19895 PF00664 ABC transporter transmembrane region BF17_19895 PF00005 ABC transporter BF17_19910 PF03412 Peptidase C39 family BF17_19910 PF00664 ABC transporter transmembrane region BF17_19910 PF00005 ABC transporter BF17_19915 PF02610 L-arabinose isomerase BF17_19915 PF11762 L-arabinose isomerase C-terminal domain BF17_19920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF17_19925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF17_19930 PF00005 ABC transporter BF17_19935 PF02653 Branched-chain amino acid transport system / permease component BF17_19940 PF02311 AraC-like ligand binding domain BF17_19940 PF12833 Helix-turn-helix domain BF17_19945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF17_19945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF17_19950 PF13593 SBF-like CPA transporter family (DUF4137) BF17_19955 PF00962 Adenosine/AMP deaminase BF17_19970 PF06097 Bacterial protein of unknown function (DUF945) BF17_19975 PF01238 Phosphomannose isomerase type I BF17_19995 PF07690 Major Facilitator Superfamily BF17_20005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_20005 PF03466 LysR substrate binding domain BF17_20010 PF00480 ROK family BF17_20025 PF06649 Protein of unknown function (DUF1161) BF17_20030 PF06932 Protein of unknown function (DUF1283) BF17_20035 PF00106 short chain dehydrogenase BF17_20040 PF01590 GAF domain BF17_20040 PF02954 Bacterial regulatory protein, Fis family BF17_20040 PF00158 Sigma-54 interaction domain BF17_20045 PF00171 Aldehyde dehydrogenase family BF17_20050 PF00892 EamA-like transporter family BF17_20070 PF00155 Aminotransferase class I and II BF17_20075 PF03553 Na+/H+ antiporter family BF17_20080 PF00356 Bacterial regulatory proteins, lacI family BF17_20090 PF13407 Periplasmic binding protein domain BF17_20095 PF02653 Branched-chain amino acid transport system / permease component BF17_20100 PF00005 ABC transporter BF17_20110 PF09084 NMT1/THI5 like BF17_20115 PF00528 Binding-protein-dependent transport system inner membrane component BF17_20120 PF00005 ABC transporter BF17_20125 PF01048 Phosphorylase superfamily BF17_20125 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus BF17_20150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF17_20150 PF00205 Thiamine pyrophosphate enzyme, central domain BF17_20150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF17_20155 PF01842 ACT domain BF17_20160 PF13419 Haloacid dehalogenase-like hydrolase BF17_20170 PF00245 Alkaline phosphatase BF17_20175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF17_20175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF17_20180 PF13545 Crp-like helix-turn-helix domain BF17_20180 PF00027 Cyclic nucleotide-binding domain BF17_20185 PF00582 Universal stress protein family BF17_20190 PF02233 NAD(P) transhydrogenase beta subunit BF17_20195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF17_20195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF17_20195 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BF17_20200 PF07338 Protein of unknown function (DUF1471) BF17_20205 PF13520 Amino acid permease BF17_20215 PF00072 Response regulator receiver domain BF17_20215 PF00486 Transcriptional regulatory protein, C terminal BF17_20220 PF00512 His Kinase A (phospho-acceptor) domain BF17_20220 PF00672 HAMP domain BF17_20220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_20225 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BF17_20235 PF04264 YceI-like domain BF17_20240 PF01292 Prokaryotic cytochrome b561 BF17_20255 PF00089 Trypsin BF17_20270 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BF17_20270 PF04408 Helicase associated domain (HA2) BF17_20270 PF11898 Domain of unknown function (DUF3418) BF17_20270 PF00270 DEAD/DEAH box helicase BF17_20270 PF00271 Helicase conserved C-terminal domain BF17_20275 PF02525 Flavodoxin-like fold BF17_20280 PF04198 Putative sugar-binding domain BF17_20280 PF00325 Bacterial regulatory proteins, crp family BF17_20285 PF01232 Mannitol dehydrogenase Rossmann domain BF17_20285 PF08125 Mannitol dehydrogenase C-terminal domain BF17_20290 PF07027 Protein of unknown function (DUF1318) BF17_20295 PF13617 YnbE-like lipoprotein BF17_20300 PF11739 Dicarboxylate transport BF17_20325 PF03724 META domain BF17_20330 PF03891 Domain of unknown function (DUF333) BF17_20335 PF00893 Small Multidrug Resistance protein BF17_20340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF17_20340 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BF17_20340 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BF17_20340 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BF17_20340 PF10371 Domain of unknown function BF17_20345 PF01171 PP-loop family BF17_20350 PF01544 CorA-like Mg2+ transporter protein BF17_20355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF17_20360 PF00246 Zinc carboxypeptidase BF17_20365 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF17_20365 PF13378 Enolase C-terminal domain-like BF17_20370 PF08534 Redoxin BF17_20375 PF18024 Helix-turn-helix domain BF17_20375 PF00158 Sigma-54 interaction domain BF17_20390 PF05128 Domain of unknown function (DUF697) BF17_20395 PF04317 YcjX-like family, DUF463 BF17_20405 PF04024 PspC domain BF17_20410 PF06667 Phage shock protein B BF17_20415 PF04012 PspA/IM30 family BF17_20420 PF00158 Sigma-54 interaction domain BF17_20420 PF02954 Bacterial regulatory protein, Fis family BF17_20425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF17_20430 PF00528 Binding-protein-dependent transport system inner membrane component BF17_20435 PF00528 Binding-protein-dependent transport system inner membrane component BF17_20435 PF12911 N-terminal TM domain of oligopeptide transport permease C BF17_20440 PF00005 ABC transporter BF17_20440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF17_20445 PF00005 ABC transporter BF17_20455 PF00854 POT family BF17_20465 PF04893 Yip1 domain BF17_20470 PF11656 YjbD family (DUF3811) BF17_20480 PF00043 Glutathione S-transferase, C-terminal domain BF17_20480 PF02798 Glutathione S-transferase, N-terminal domain BF17_20485 PF08543 Phosphomethylpyrimidine kinase BF17_20490 PF01479 S4 domain BF17_20490 PF00579 tRNA synthetases class I (W and Y) BF17_20495 PF01243 Pyridoxamine 5'-phosphate oxidase BF17_20495 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BF17_20500 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme BF17_20505 PF03702 Anhydro-N-acetylmuramic acid kinase BF17_20510 PF05433 Glycine zipper 2TM domain BF17_20515 PF01047 MarR family BF17_20520 PF00248 Aldo/keto reductase family BF17_20525 PF06945 Protein of unknown function (DUF1289) BF17_20530 PF00884 Sulfatase BF17_20530 PF08019 Phosphoethanolamine transferase EptA/EptB BF17_20535 PF00440 Bacterial regulatory proteins, tetR family BF17_20535 PF16925 Tetracyclin repressor-like, C-terminal domain BF17_20540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF17_20550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF17_20555 PF00929 Exonuclease BF17_20560 PF00462 Glutaredoxin BF17_20565 PF00877 NlpC/P60 family BF17_20570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF17_20570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF17_20580 PF00356 Bacterial regulatory proteins, lacI family BF17_20585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_20585 PF03466 LysR substrate binding domain BF17_20590 PF07690 Major Facilitator Superfamily BF17_20600 PF00677 Lumazine binding domain BF17_20605 PF01554 MatE BF17_20625 PF02887 Pyruvate kinase, alpha/beta domain BF17_20625 PF00224 Pyruvate kinase, barrel domain BF17_20630 PF04728 Lipoprotein leucine-zipper BF17_20635 PF03734 L,D-transpeptidase catalytic domain BF17_20635 PF17969 L,D-transpeptidase C-terminal domain BF17_20635 PF01476 LysM domain BF17_20640 PF02657 Fe-S metabolism associated domain BF17_20645 PF00266 Aminotransferase class-V BF17_20650 PF01458 Uncharacterized protein family (UPF0051) BF17_20655 PF00005 ABC transporter BF17_20660 PF01458 Uncharacterized protein family (UPF0051) BF17_20665 PF01521 Iron-sulphur cluster biosynthesis BF17_20670 PF03061 Thioesterase superfamily BF17_20685 PF01594 AI-2E family transporter BF17_20690 PF00391 PEP-utilising enzyme, mobile domain BF17_20690 PF02896 PEP-utilising enzyme, TIM barrel domain BF17_20690 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BF17_20695 PF03618 Kinase/pyrophosphorylase BF17_20700 PF00793 DAHP synthetase I family BF17_20705 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BF17_20710 PF03099 Biotin/lipoate A/B protein ligase family BF17_20710 PF10437 Bacterial lipoate protein ligase C-terminus BF17_20715 PF00877 NlpC/P60 family BF17_20725 PF00892 EamA-like transporter family BF17_20730 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BF17_20735 PF01522 Polysaccharide deacetylase BF17_20740 PF01370 NAD dependent epimerase/dehydratase family BF17_20740 PF02911 Formyl transferase, C-terminal domain BF17_20740 PF00551 Formyl transferase BF17_20745 PF00535 Glycosyl transferase family 2 BF17_20750 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF17_20755 PF00005 ABC transporter BF17_20760 PF00255 Glutathione peroxidase BF17_20765 PF01032 FecCD transport family BF17_20770 PF00216 Bacterial DNA-binding protein BF17_20775 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BF17_20775 PF03147 Ferredoxin-fold anticodon binding domain BF17_20775 PF03484 tRNA synthetase B5 domain BF17_20775 PF01588 Putative tRNA binding domain BF17_20775 PF03483 B3/4 domain BF17_20780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BF17_20780 PF01409 tRNA synthetases class II core domain (F) BF17_20790 PF00453 Ribosomal protein L20 BF17_20795 PF01632 Ribosomal protein L35 BF17_20800 PF00707 Translation initiation factor IF-3, C-terminal domain BF17_20800 PF05198 Translation initiation factor IF-3, N-terminal domain BF17_20805 PF03129 Anticodon binding domain BF17_20805 PF02824 TGS domain BF17_20805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF17_20805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF17_20815 PF13619 KTSC domain BF17_20825 PF01914 MarC family integral membrane protein BF17_20830 PF01464 Transglycosylase SLT domain BF17_20835 PF01297 Zinc-uptake complex component A periplasmic BF17_20840 PF00005 ABC transporter BF17_20845 PF00950 ABC 3 transport family BF17_20850 PF00950 ABC 3 transport family BF17_20855 PF01527 Transposase BF17_20860 PF13683 Integrase core domain BF17_20860 PF13276 HTH-like domain BF17_20870 PF14002 YniB-like protein BF17_20880 PF02796 Helix-turn-helix domain of resolvase BF17_20880 PF00239 Resolvase, N terminal domain BF17_20900 PF13419 Haloacid dehalogenase-like hydrolase BF17_20905 PF07883 Cupin domain BF17_20910 PF04962 KduI/IolB family BF17_20920 PF06917 Periplasmic pectate lyase BF17_20925 PF00528 Binding-protein-dependent transport system inner membrane component BF17_20930 PF00528 Binding-protein-dependent transport system inner membrane component BF17_20935 PF00005 ABC transporter BF17_20935 PF17912 MalK OB fold domain BF17_20935 PF03459 TOBE domain BF17_20940 PF01547 Bacterial extracellular solute-binding protein BF17_20945 PF06178 Oligogalacturonate-specific porin protein (KdgM) BF17_20950 PF04307 LexA-binding, inner membrane-associated putative hydrolase BF17_20960 PF01510 N-acetylmuramoyl-L-alanine amidase BF17_20965 PF01614 Bacterial transcriptional regulator BF17_20965 PF09339 IclR helix-turn-helix domain BF17_20970 PF14583 Oligogalacturonate lyase BF17_20975 PF07690 Major Facilitator Superfamily BF17_20980 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_20980 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_20990 PF13953 PapC C-terminal domain BF17_20990 PF13954 PapC N-terminal domain BF17_20990 PF00577 Outer membrane usher protein BF17_20995 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_20995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_21000 PF00419 Fimbrial protein BF17_21005 PF01435 Peptidase family M48 BF17_21010 PF17804 Tail specific protease N-terminal domain BF17_21010 PF03572 Peptidase family S41 BF17_21010 PF00595 PDZ domain BF17_21010 PF11818 C-terminal domain of tail specific protease (DUF3340) BF17_21015 PF17516 ProQ C-terminal domain BF17_21015 PF04352 ProQ/FINO family BF17_21020 PF13185 GAF domain BF17_21025 PF04403 Paraquat-inducible protein A BF17_21070 PF07351 Protein of unknown function (DUF1480) BF17_21095 PF13302 Acetyltransferase (GNAT) domain BF17_21115 PF00842 Alanine racemase, C-terminal domain BF17_21115 PF01168 Alanine racemase, N-terminal domain BF17_21135 PF05662 Coiled stalk of trimeric autotransporter adhesin BF17_21135 PF03895 YadA-like membrane anchor domain BF17_21135 PF05658 Head domain of trimeric autotransporter adhesin BF17_21135 PF13018 Extended Signal Peptide of Type V secretion system BF17_21160 PF05662 Coiled stalk of trimeric autotransporter adhesin BF17_21160 PF05658 Head domain of trimeric autotransporter adhesin BF17_21160 PF13018 Extended Signal Peptide of Type V secretion system BF17_21160 PF03895 YadA-like membrane anchor domain BF17_21165 PF01510 N-acetylmuramoyl-L-alanine amidase BF17_21170 PF04344 Chemotaxis phosphatase, CheZ BF17_21175 PF00072 Response regulator receiver domain BF17_21180 PF01339 CheB methylesterase BF17_21180 PF00072 Response regulator receiver domain BF17_21185 PF03705 CheR methyltransferase, all-alpha domain BF17_21185 PF01739 CheR methyltransferase, SAM binding domain BF17_21190 PF00672 HAMP domain BF17_21190 PF02203 Tar ligand binding domain homologue BF17_21190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF17_21210 PF01584 CheW-like domain BF17_21215 PF01584 CheW-like domain BF17_21215 PF02895 Signal transducing histidine kinase, homodimeric domain BF17_21215 PF01627 Hpt domain BF17_21215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_21215 PF09078 CheY binding BF17_21225 PF01618 MotA/TolQ/ExbB proton channel family BF17_21230 PF05280 Flagellar transcriptional activator (FlhC) BF17_21235 PF05247 Flagellar transcriptional activator (FlhD) BF17_21240 PF00690 Cation transporter/ATPase, N-terminus BF17_21240 PF00689 Cation transporting ATPase, C-terminus BF17_21245 PF02308 MgtC family BF17_21250 PF00672 HAMP domain BF17_21250 PF02203 Tar ligand binding domain homologue BF17_21250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF17_21255 PF10781 Dextransucrase DSRB BF17_21260 PF00313 'Cold-shock' DNA-binding domain BF17_21265 PF00703 Glycosyl hydrolases family 2 BF17_21265 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BF17_21265 PF02837 Glycosyl hydrolases family 2, sugar binding domain BF17_21265 PF16353 Domain of unknown function(DUF4981) BF17_21265 PF02929 Beta galactosidase small chain BF17_21270 PF02801 Beta-ketoacyl synthase, C-terminal domain BF17_21270 PF00109 Beta-ketoacyl synthase, N-terminal domain BF17_21270 PF14765 Polyketide synthase dehydratase BF17_21270 PF16197 Ketoacyl-synthetase C-terminal extension BF17_21270 PF00698 Acyl transferase domain BF17_21270 PF08240 Alcohol dehydrogenase GroES-like domain BF17_21270 PF00550 Phosphopantetheine attachment site BF17_21270 PF08659 KR domain BF17_21270 PF00107 Zinc-binding dehydrogenase BF17_21275 PF10777 Inner membrane protein YlaC BF17_21280 PF13404 AsnC-type helix-turn-helix domain BF17_21280 PF01037 Lrp/AsnC ligand binding domain BF17_21290 PF14001 YdfZ protein BF17_21295 PF00328 Histidine phosphatase superfamily (branch 2) BF17_21300 PF01053 Cys/Met metabolism PLP-dependent enzyme BF17_21305 PF08447 PAS fold BF17_21305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF17_21315 PF00356 Bacterial regulatory proteins, lacI family BF17_21315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF17_21320 PF00180 Isocitrate/isopropylmalate dehydrogenase BF17_21340 PF01527 Transposase BF17_21345 PF13276 HTH-like domain BF17_21345 PF00665 Integrase core domain BF17_21345 PF13333 Integrase core domain BF17_21360 PF03335 Phage tail fibre repeat BF17_21360 PF08400 Prophage tail fibre N-terminal BF17_21360 PF07484 Phage Tail Collar Domain BF17_21365 PF00535 Glycosyl transferase family 2 BF17_21370 PF02413 Caudovirales tail fibre assembly protein, lambda gpK BF17_21375 PF07484 Phage Tail Collar Domain BF17_21375 PF03335 Phage tail fibre repeat BF17_21465 PF06530 Phage antitermination protein Q BF17_21470 PF07102 Protein of unknown function (DUF1364) BF17_21530 PF10548 P22AR C-terminal domain BF17_21530 PF08346 AntA/AntB antirepressor BF17_21560 PF00589 Phage integrase family BF17_21560 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain BF17_21565 PF00180 Isocitrate/isopropylmalate dehydrogenase BF17_21570 PF00849 RNA pseudouridylate synthase BF17_21575 PF00293 NUDIX domain BF17_21585 PF04356 Protein of unknown function (DUF489) BF17_21590 PF00206 Lyase BF17_21590 PF08328 Adenylosuccinate lyase C-terminal BF17_21600 PF00486 Transcriptional regulatory protein, C terminal BF17_21600 PF00072 Response regulator receiver domain BF17_21605 PF08918 PhoQ Sensor BF17_21605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_21610 PF08007 Cupin superfamily protein BF17_21615 PF07687 Peptidase dimerisation domain BF17_21615 PF01546 Peptidase family M20/M25/M40 BF17_21620 PF02146 Sir2 family BF17_21625 PF00480 ROK family BF17_21630 PF02687 FtsX-like permease family BF17_21630 PF12704 MacB-like periplasmic core domain BF17_21635 PF00005 ABC transporter BF17_21640 PF12704 MacB-like periplasmic core domain BF17_21640 PF02687 FtsX-like permease family BF17_21645 PF02559 CarD-like/TRCF domain BF17_21645 PF17757 UvrB interaction domain BF17_21645 PF03461 TRCF domain BF17_21645 PF00271 Helicase conserved C-terminal domain BF17_21645 PF00270 DEAD/DEAH box helicase BF17_21650 PF05433 Glycine zipper 2TM domain BF17_21665 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_21670 PF05728 Uncharacterised protein family (UPF0227) BF17_21675 PF00933 Glycosyl hydrolase family 3 N terminal domain BF17_21680 PF01636 Phosphotransferase enzyme family BF17_21685 PF13036 Peptidoglycan-synthase activator LpoB BF17_21685 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BF17_21690 PF07233 Protein of unknown function (DUF1425) BF17_21695 PF01230 HIT domain BF17_21700 PF08501 Shikimate dehydrogenase substrate binding domain BF17_21705 PF02378 Phosphotransferase system, EIIC BF17_21705 PF00367 phosphotransferase system, EIIB BF17_21710 PF01026 TatD related DNase BF17_21715 PF09115 DNA polymerase III, delta subunit, C terminal BF17_21720 PF02223 Thymidylate kinase BF17_21725 PF02618 YceG-like family BF17_21730 PF01063 Amino-transferase class IV BF17_21735 PF00109 Beta-ketoacyl synthase, N-terminal domain BF17_21735 PF02801 Beta-ketoacyl synthase, C-terminal domain BF17_21740 PF00550 Phosphopantetheine attachment site BF17_21750 PF00698 Acyl transferase domain BF17_21755 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF17_21755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF17_21760 PF02504 Fatty acid synthesis protein BF17_21765 PF01783 Ribosomal L32p protein family BF17_21770 PF02620 Large ribosomal RNA subunit accumulation protein YceD BF17_21775 PF02545 Maf-like protein BF17_21780 PF01479 S4 domain BF17_21780 PF00849 RNA pseudouridylate synthase BF17_21785 PF12111 Polyribonucleotide phosphorylase C terminal BF17_21785 PF00575 S1 RNA binding domain BF17_21785 PF10150 Ribonuclease E/G family BF17_21795 PF01979 Amidohydrolase family BF17_21800 PF06183 DinI-like family BF17_21805 PF13991 BssS protein family BF17_21810 PF01266 FAD dependent oxidoreductase BF17_21815 PF00196 Bacterial regulatory proteins, luxR family BF17_21820 PF01594 AI-2E family transporter BF17_21850 PF03279 Bacterial lipid A biosynthesis acyltransferase BF17_21855 PF00854 POT family BF17_21860 PF07119 Protein of unknown function (DUF1375) BF17_21865 PF00535 Glycosyl transferase family 2 BF17_21870 PF04349 Periplasmic glucan biosynthesis protein, MdoG BF17_21890 PF02080 TrkA-C domain BF17_21890 PF03471 Transporter associated domain BF17_21890 PF00999 Sodium/hydrogen exchanger family BF17_21905 PF00196 Bacterial regulatory proteins, luxR family BF17_21905 PF03472 Autoinducer binding domain BF17_21915 PF09618 CRISPR-associated protein (Cas_Csy4) BF17_21920 PF09615 CRISPR-associated protein (Cas_Csy3) BF17_21925 PF09614 CRISPR-associated protein (Cas_Csy2) BF17_21930 PF09611 CRISPR-associated protein (Cas_Csy1) BF17_21940 PF01867 CRISPR associated protein Cas1 BF17_21945 PF00924 Mechanosensitive ion channel BF17_21965 PF04041 beta-1,4-mannooligosaccharide phosphorylase BF17_21970 PF00528 Binding-protein-dependent transport system inner membrane component BF17_21975 PF00528 Binding-protein-dependent transport system inner membrane component BF17_21985 PF00356 Bacterial regulatory proteins, lacI family BF17_21990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF17_21990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF17_21990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF17_21990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF17_21995 PF00005 ABC transporter BF17_21995 PF17912 MalK OB fold domain BF17_22010 PF01609 Transposase DDE domain BF17_22010 PF13006 Insertion element 4 transposase N-terminal BF17_22020 PF04829 Pre-toxin domain with VENN motif BF17_22020 PF15526 Novel toxin 21 BF17_22020 PF05860 haemagglutination activity domain BF17_22020 PF13332 Hemagglutinin repeat BF17_22020 PF05594 Haemagluttinin repeat BF17_22040 PF13332 Hemagglutinin repeat BF17_22040 PF04829 Pre-toxin domain with VENN motif BF17_22045 PF18624 CDI immunity protein BF17_22050 PF13332 Hemagglutinin repeat BF17_22050 PF13018 Extended Signal Peptide of Type V secretion system BF17_22050 PF04829 Pre-toxin domain with VENN motif BF17_22050 PF05860 haemagglutination activity domain BF17_22055 PF18228 CdiI N-terminal domain BF17_22060 PF05594 Haemagluttinin repeat BF17_22060 PF05860 haemagglutination activity domain BF17_22060 PF15526 Novel toxin 21 BF17_22060 PF04829 Pre-toxin domain with VENN motif BF17_22060 PF13332 Hemagglutinin repeat BF17_22075 PF13332 Hemagglutinin repeat BF17_22075 PF13018 Extended Signal Peptide of Type V secretion system BF17_22075 PF05860 haemagglutination activity domain BF17_22075 PF04829 Pre-toxin domain with VENN motif BF17_22080 PF05860 haemagglutination activity domain BF17_22080 PF13332 Hemagglutinin repeat BF17_22080 PF15526 Novel toxin 21 BF17_22080 PF05594 Haemagluttinin repeat BF17_22080 PF04829 Pre-toxin domain with VENN motif BF17_22090 PF13332 Hemagglutinin repeat BF17_22090 PF13018 Extended Signal Peptide of Type V secretion system BF17_22090 PF05860 haemagglutination activity domain BF17_22090 PF04829 Pre-toxin domain with VENN motif BF17_22110 PF00175 Oxidoreductase NAD-binding domain BF17_22110 PF00970 Oxidoreductase FAD-binding domain BF17_22110 PF00111 2Fe-2S iron-sulfur cluster binding domain BF17_22115 PF00355 Rieske [2Fe-2S] domain BF17_22115 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BF17_22120 PF02028 BCCT, betaine/carnitine/choline family transporter BF17_22125 PF00180 Isocitrate/isopropylmalate dehydrogenase BF17_22135 PF00356 Bacterial regulatory proteins, lacI family BF17_22140 PF02653 Branched-chain amino acid transport system / permease component BF17_22145 PF00005 ABC transporter BF17_22150 PF13407 Periplasmic binding protein domain BF17_22155 PF00107 Zinc-binding dehydrogenase BF17_22155 PF08240 Alcohol dehydrogenase GroES-like domain BF17_22175 PF13505 Outer membrane protein beta-barrel domain BF17_22185 PF00892 EamA-like transporter family BF17_22195 PF13649 Methyltransferase domain BF17_22200 PF00210 Ferritin-like domain BF17_22215 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF17_22220 PF00528 Binding-protein-dependent transport system inner membrane component BF17_22225 PF00005 ABC transporter BF17_22230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF17_22230 PF08447 PAS fold BF17_22230 PF13426 PAS domain BF17_22235 PF05971 RNA methyltransferase BF17_22250 PF02885 Glycosyl transferase family, helical bundle domain BF17_22260 PF13378 Enolase C-terminal domain-like BF17_22265 PF00378 Enoyl-CoA hydratase/isomerase BF17_22270 PF12697 Alpha/beta hydrolase family BF17_22275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF17_22275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF17_22275 PF16582 Middle domain of thiamine pyrophosphate BF17_22280 PF00425 chorismate binding enzyme BF17_22290 PF05957 Bacterial protein of unknown function (DUF883) BF17_22295 PF00920 Dehydratase family BF17_22310 PF01202 Shikimate kinase BF17_22320 PF00361 Proton-conducting membrane transporter BF17_22325 PF00361 Proton-conducting membrane transporter BF17_22330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF17_22330 PF00361 Proton-conducting membrane transporter BF17_22335 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BF17_22340 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BF17_22345 PF12838 4Fe-4S dicluster domain BF17_22350 PF00146 NADH dehydrogenase BF17_22355 PF00384 Molybdopterin oxidoreductase BF17_22355 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF17_22355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF17_22355 PF01568 Molydopterin dinucleotide binding domain BF17_22360 PF10531 SLBB domain BF17_22360 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BF17_22360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BF17_22370 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BF17_22370 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BF17_22385 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BF17_22390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_22390 PF03466 LysR substrate binding domain BF17_22400 PF00155 Aminotransferase class I and II BF17_22415 PF03600 Citrate transporter BF17_22415 PF02080 TrkA-C domain BF17_22420 PF13419 Haloacid dehalogenase-like hydrolase BF17_22425 PF03887 YfbU domain BF17_22430 PF04217 Protein of unknown function, DUF412 BF17_22435 PF00871 Acetokinase family BF17_22440 PF07085 DRTGG domain BF17_22440 PF01515 Phosphate acetyl/butaryl transferase BF17_22445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF17_22445 PF00356 Bacterial regulatory proteins, lacI family BF17_22450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF17_22460 PF03611 PTS system sugar-specific permease component BF17_22465 PF00293 NUDIX domain BF17_22470 PF12850 Calcineurin-like phosphoesterase superfamily domain BF17_22475 PF00563 EAL domain BF17_22485 PF01370 NAD dependent epimerase/dehydratase family BF17_22485 PF08338 Domain of unknown function (DUF1731) BF17_22490 PF00005 ABC transporter BF17_22495 PF00528 Binding-protein-dependent transport system inner membrane component BF17_22500 PF00528 Binding-protein-dependent transport system inner membrane component BF17_22505 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF17_22510 PF02441 Flavoprotein BF17_22515 PF00156 Phosphoribosyl transferase domain BF17_22520 PF02674 Colicin V production protein BF17_22525 PF05036 Sporulation related domain BF17_22530 PF02875 Mur ligase family, glutamate ligase domain BF17_22530 PF08245 Mur ligase middle domain BF17_22535 PF01039 Carboxyl transferase domain BF17_22535 PF17848 Acetyl-coA carboxylase zinc finger domain BF17_22540 PF09335 SNARE associated Golgi protein BF17_22545 PF01416 tRNA pseudouridine synthase BF17_22550 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF17_22550 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF17_22555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF17_22555 PF11890 Domain of unknown function (DUF3410) BF17_22555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF17_22565 PF00892 EamA-like transporter family BF17_22575 PF00419 Fimbrial protein BF17_22580 PF01177 Asp/Glu/Hydantoin racemase BF17_22585 PF00990 Diguanylate cyclase, GGDEF domain BF17_22590 PF00109 Beta-ketoacyl synthase, N-terminal domain BF17_22590 PF02801 Beta-ketoacyl synthase, C-terminal domain BF17_22595 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BF17_22595 PF01266 FAD dependent oxidoreductase BF17_22600 PF08891 YfcL protein BF17_22605 PF04315 Elongation factor P hydroxylase BF17_22610 PF01925 Sulfite exporter TauE/SafE BF17_22615 PF03411 Penicillin-insensitive murein endopeptidase BF17_22620 PF01264 Chorismate synthase BF17_22625 PF05175 Methyltransferase small domain BF17_22630 PF01713 Smr domain BF17_22640 PF00300 Histidine phosphatase superfamily (branch 1) BF17_22655 PF00108 Thiolase, N-terminal domain BF17_22655 PF02803 Thiolase, C-terminal domain BF17_22660 PF04175 Protein of unknown function (DUF406) BF17_22665 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BF17_22670 PF04333 MlaA lipoprotein BF17_22675 PF03918 Cytochrome C biogenesis protein BF17_22680 PF03918 Cytochrome C biogenesis protein BF17_22685 PF08534 Redoxin BF17_22690 PF01578 Cytochrome C assembly protein BF17_22690 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BF17_22695 PF03100 CcmE BF17_22700 PF04995 Heme exporter protein D (CcmD) BF17_22705 PF01578 Cytochrome C assembly protein BF17_22710 PF03379 CcmB protein BF17_22715 PF00005 ABC transporter BF17_22735 PF04011 LemA family BF17_22745 PF08274 PhnA Zinc-Ribbon BF17_22745 PF03831 PhnA domain BF17_22825 PF13953 PapC C-terminal domain BF17_22825 PF00577 Outer membrane usher protein BF17_22825 PF13954 PapC N-terminal domain BF17_22835 PF02753 Pili assembly chaperone PapD, C-terminal domain BF17_22835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BF17_22845 PF16970 Type-1 fimbrial protein, A BF17_22850 PF00004 ATPase family associated with various cellular activities (AAA) BF17_22850 PF07724 AAA domain (Cdc48 subfamily) BF17_22850 PF10431 C-terminal, D2-small domain, of ClpB protein BF17_22850 PF17871 AAA lid domain BF17_22905 PF00324 Amino acid permease BF17_22910 PF13406 Transglycosylase SLT domain BF17_22920 PF00528 Binding-protein-dependent transport system inner membrane component BF17_22925 PF00005 ABC transporter BF17_22935 PF05638 Type VI secretion system effector, Hcp BF17_22960 PF12800 4Fe-4S binding domain BF17_22960 PF13247 4Fe-4S dicluster domain BF17_22965 PF04976 DMSO reductase anchor subunit (DmsC) BF17_22970 PF02613 Nitrate reductase delta subunit BF17_22985 PF01292 Prokaryotic cytochrome b561 BF17_22990 PF00155 Aminotransferase class I and II BF17_22995 PF07350 Protein of unknown function (DUF1479) BF17_23000 PF02685 Glucokinase BF17_23010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF17_23010 PF03466 LysR substrate binding domain BF17_23015 PF00248 Aldo/keto reductase family BF17_23025 PF01566 Natural resistance-associated macrophage protein BF17_23035 PF07670 Nucleoside recognition BF17_23035 PF01773 Na+ dependent nucleoside transporter N-terminus BF17_23035 PF07662 Na+ dependent nucleoside transporter C-terminus BF17_23060 PF00749 tRNA synthetases class I (E and Q), catalytic domain BF17_23085 PF12843 Putative quorum-sensing-regulated virulence factor BF17_23090 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BF17_23090 PF03120 NAD-dependent DNA ligase OB-fold domain BF17_23090 PF01653 NAD-dependent DNA ligase adenylation domain BF17_23090 PF12826 Helix-hairpin-helix motif BF17_23090 PF00533 BRCA1 C Terminus (BRCT) domain BF17_23095 PF04354 ZipA, C-terminal FtsZ-binding domain BF17_23105 PF00291 Pyridoxal-phosphate dependent enzyme BF17_23110 PF00381 PTS HPr component phosphorylation site BF17_23115 PF02896 PEP-utilising enzyme, TIM barrel domain BF17_23115 PF05524 PEP-utilising enzyme, N-terminal BF17_23115 PF00391 PEP-utilising enzyme, mobile domain BF17_23120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF17_23125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF17_23125 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF17_23130 PF00474 Sodium:solute symporter family BF17_23140 PF00557 Metallopeptidase family M24 BF17_23145 PF00155 Aminotransferase class I and II BF17_23155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF17_23155 PF00512 His Kinase A (phospho-acceptor) domain BF17_23155 PF00672 HAMP domain BF17_23160 PF00072 Response regulator receiver domain BF17_23160 PF00486 Transcriptional regulatory protein, C terminal BF17_23165 PF00291 Pyridoxal-phosphate dependent enzyme BF17_23170 PF00005 ABC transporter BF17_23175 PF00528 Binding-protein-dependent transport system inner membrane component BF17_23180 PF00528 Binding-protein-dependent transport system inner membrane component BF17_23190 PF07690 Major Facilitator Superfamily BF17_23195 PF01380 SIS domain BF17_23195 PF01418 Helix-turn-helix domain, rpiR family BF17_23200 PF04074 YhcH/YjgK/YiaL BF17_23205 PF00480 ROK family BF17_23210 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BF17_23215 PF00701 Dihydrodipicolinate synthetase family BF17_23220 PF04261 Dyp-type peroxidase family BF17_23225 PF06572 Protein of unknown function (DUF1131) BF17_23230 PF04076 Bacterial OB fold (BOF) protein BF17_23235 PF03797 Autotransporter beta-domain BF17_23235 PF13018 Extended Signal Peptide of Type V secretion system BF17_23235 PF16168 Adhesin of bacterial autotransporter system, probable stalk BF17_23235 PF03212 Pertactin BF17_23245 PF00583 Acetyltransferase (GNAT) family BF17_23275 PF00583 Acetyltransferase (GNAT) family BF17_23280 PF01218 Coproporphyrinogen III oxidase BF17_23285 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BF17_23290 PF00390 Malic enzyme, N-terminal domain BF17_23290 PF01515 Phosphate acetyl/butaryl transferase BF17_23290 PF03949 Malic enzyme, NAD binding domain BF17_23310 PF00293 NUDIX domain BF17_23315 PF03264 NapC/NirT cytochrome c family, N-terminal region BF17_23320 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BF17_23325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF17_23325 PF00384 Molybdopterin oxidoreductase BF17_23325 PF01568 Molydopterin dinucleotide binding domain BF17_23325 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF17_23330 PF03927 NapD protein BF17_23335 PF12800 4Fe-4S binding domain BF17_23335 PF13187 4Fe-4S dicluster domain BF17_23335 PF00037 4Fe-4S binding domain BF17_23355 PF00873 AcrB/AcrD/AcrF family BF17_23360 PF04307 LexA-binding, inner membrane-associated putative hydrolase BF17_23365 PF13186 Iron-sulfur cluster-binding domain BF17_23365 PF04055 Radical SAM superfamily BF17_23370 PF00884 Sulfatase BF17_23375 PF00005 ABC transporter BF17_23375 PF08402 TOBE domain BF17_23380 PF00528 Binding-protein-dependent transport system inner membrane component BF17_23400 PF03960 ArsC family BF17_23405 PF01546 Peptidase family M20/M25/M40 BF17_23405 PF07687 Peptidase dimerisation domain BF17_23410 PF02557 D-alanyl-D-alanine carboxypeptidase BF17_23415 PF13980 Uncharacterised protein family (UPF0370) BF17_23420 PF08351 Domain of unknown function (DUF1726) BF17_23420 PF13718 GNAT acetyltransferase 2 BF17_23420 PF17176 tRNA-binding domain BF17_23420 PF05127 Helicase BF17_23425 PF04284 Protein of unknown function (DUF441) BF17_23440 PF01259 SAICAR synthetase BF17_23445 PF06804 NlpB/DapX lipoprotein BF17_23450 PF00701 Dihydrodipicolinate synthetase family BF17_23455 PF01842 ACT domain BF17_23460 PF00578 AhpC/TSA family BF17_23480 PF01594 AI-2E family transporter BF17_23495 PF03960 ArsC family BF17_23500 PF00308 Bacterial dnaA protein BF17_23505 PF00860 Permease family BF17_23520 PF02769 AIR synthase related protein, C-terminal domain BF17_23520 PF00586 AIR synthase related protein, N-terminal domain BF17_23525 PF00551 Formyl transferase