BF17_00030 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BF17_00070 SM00857 Resolvase, N terminal domain BF17_00155 SM00530 Helix-turn-helix XRE-family like proteins BF17_00385 SM00382 ATPases associated with a variety of cellular activities BF17_00415 SM00924 MgtE intracellular N domain BF17_00445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF17_00445 SM00387 Histidine kinase-like ATPases BF17_00445 SM00388 His Kinase A (phosphoacceptor) domain BF17_00450 SM00448 cheY-homologous receiver domain BF17_00450 SM00862 Transcriptional regulatory protein, C terminal BF17_00470 SM00046 Diacylglycerol kinase catalytic domain (presumed) BF17_00545 SM00116 Domain in cystathionine beta-synthase and other proteins. BF17_00545 SM01240 BF17_00545 BF17_00565 SM00564 beta-propeller repeat BF17_00590 SM00530 Helix-turn-helix XRE-family like proteins BF17_00595 SM00028 Tetratricopeptide repeats BF17_00605 SM00562 BF17_00605 BF17_00610 SM00247 Beta/gamma crystallins BF17_00620 SM00869 Autotransporter beta-domain BF17_00625 SM00869 Autotransporter beta-domain BF17_00655 SM00271 DnaJ molecular chaperone homology domain BF17_00740 SM00938 Nitrogen regulatory protein P-II BF17_00765 SM00387 Histidine kinase-like ATPases BF17_00765 SM00388 His Kinase A (phosphoacceptor) domain BF17_00785 SM01211 BF17_00785 BF17_00790 SM00062 Bacterial periplasmic substrate-binding proteins BF17_00840 SM00358 Double-stranded RNA binding motif BF17_00840 SM00535 Ribonuclease III family BF17_00890 SM00487 DEAD-like helicases superfamily BF17_00890 SM00490 helicase superfamily c-terminal domain BF17_00895 SM00248 ankyrin repeats BF17_00910 SM00986 Uracil DNA glycosylase superfamily BF17_00910 SM00987 UreE urease accessory protein, C-terminal domain BF17_00935 SM00797 Allophanate hydrolase subunit 2 BF17_00940 SM00796 Allophanate hydrolase subunit 1 BF17_00995 SM00387 Histidine kinase-like ATPases BF17_00995 SM00388 His Kinase A (phosphoacceptor) domain BF17_01010 SM00448 cheY-homologous receiver domain BF17_01010 SM00862 Transcriptional regulatory protein, C terminal BF17_01065 SM00342 helix_turn_helix, arabinose operon control protein BF17_01150 SM00988 UreE urease accessory protein, N-terminal domain BF17_01170 SM00382 ATPases associated with a variety of cellular activities BF17_01175 SM00382 ATPases associated with a variety of cellular activities BF17_01195 SM00357 Cold shock protein domain BF17_01240 SM00382 ATPases associated with a variety of cellular activities BF17_01270 SM00479 BF17_01270 BF17_01285 SM00849 Metallo-beta-lactamase superfamily BF17_01290 SM00257 Lysin motif BF17_01345 SM00382 ATPases associated with a variety of cellular activities BF17_01345 SM00930 BF17_01345 BF17_01405 SM00977 TilS substrate C-terminal domain BF17_01420 SM00481 DNA polymerase alpha chain like domain BF17_01450 SM00935 Outer membrane protein (OmpH-like) BF17_01460 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF17_01505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF17_01550 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BF17_01550 SM00475 5'-3' exonuclease BF17_01590 SM00925 MltA specific insert domain BF17_01610 SM00646 BF17_01610 BF17_01670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BF17_01680 SM00927 DNA mismatch repair enzyme MutH BF17_01705 SM00563 Phosphate acyltransferases BF17_01715 SM00354 helix_turn _helix lactose operon repressor BF17_01740 SM00849 Metallo-beta-lactamase superfamily BF17_01760 SM00862 Transcriptional regulatory protein, C terminal BF17_01815 SM00382 ATPases associated with a variety of cellular activities BF17_01835 SM00947 Carbonic anhydrase BF17_01845 SM00869 Autotransporter beta-domain BF17_01870 SM00420 helix_turn_helix, Deoxyribose operon repressor BF17_01870 SM01134 BF17_01870 BF17_01945 SM00354 helix_turn _helix lactose operon repressor BF17_01960 SM00354 helix_turn _helix lactose operon repressor BF17_02000 SM00382 ATPases associated with a variety of cellular activities BF17_02005 SM00382 ATPases associated with a variety of cellular activities BF17_02120 SM00937 BF17_02120 BF17_02155 SM00387 Histidine kinase-like ATPases BF17_02155 SM00388 His Kinase A (phosphoacceptor) domain BF17_02160 SM00448 cheY-homologous receiver domain BF17_02160 SM00862 Transcriptional regulatory protein, C terminal BF17_02230 SM01011 Aminopeptidase P, N-terminal domain BF17_02290 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF17_02295 SM00861 Transketolase, pyrimidine binding domain BF17_02320 SM00731 SprT homologues. BF17_02345 SM00732 Likely ribonuclease with RNase H fold. BF17_02360 SM00382 ATPases associated with a variety of cellular activities BF17_02380 SM01152 BF17_02380 BF17_02390 SM00729 Elongator protein 3, MiaB family, Radical SAM BF17_02450 SM00382 ATPases associated with a variety of cellular activities BF17_03035 SM00671 Sel1-like repeats. BF17_03040 SM00155 Phospholipase D. Active site motifs. BF17_03070 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF17_03185 SM00421 helix_turn_helix, Lux Regulon BF17_03215 SM00420 helix_turn_helix, Deoxyribose operon repressor BF17_03215 SM01134 BF17_03215 BF17_03230 SM00382 ATPases associated with a variety of cellular activities BF17_03340 SM01006 Siderophore biosynthesis protein domain BF17_03370 SM00354 helix_turn _helix lactose operon repressor BF17_03435 SM00530 Helix-turn-helix XRE-family like proteins BF17_03490 SM00869 Autotransporter beta-domain BF17_03545 SM00346 helix_turn_helix isocitrate lyase regulation BF17_03550 SM00822 BF17_03550 BF17_03585 SM00382 ATPases associated with a variety of cellular activities BF17_03590 SM00382 ATPases associated with a variety of cellular activities BF17_03655 SM00364 Leucine-rich repeats, bacterial type BF17_03660 SM00364 Leucine-rich repeats, bacterial type BF17_03690 SM00860 SMI1 / KNR4 family BF17_03800 SM00862 Transcriptional regulatory protein, C terminal BF17_03870 SM00858 BF17_03870 BF17_03890 SM00382 ATPases associated with a variety of cellular activities BF17_03915 SM00382 ATPases associated with a variety of cellular activities BF17_03990 SM00060 Fibronectin type 3 domain BF17_03990 SM00636 BF17_03990 BF17_03995 SM00060 Fibronectin type 3 domain BF17_04010 SM00409 Immunoglobulin BF17_04010 SM00634 Bacterial Ig-like domain (group 1) BF17_04115 SM00342 helix_turn_helix, arabinose operon control protein BF17_04135 SM00729 Elongator protein 3, MiaB family, Radical SAM BF17_04155 SM00434 DNA Topoisomerase IV BF17_04175 SM00387 Histidine kinase-like ATPases BF17_04175 SM00433 TopoisomeraseII BF17_04255 SM01118 BF17_04255 BF17_04260 SM00287 Bacterial SH3 domain homologues BF17_04265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF17_04275 SM00905 Dihydroneopterin aldolase BF17_04280 SM01207 BF17_04280 BF17_04300 SM00400 zinc finger BF17_04300 SM00493 BF17_04300 BF17_04300 SM00766 DNA primase DnaG DnaB-binding BF17_04340 SM00778 Zinc-binding domain of primase-helicase BF17_04575 SM01217 BF17_04575 BF17_04600 SM00354 helix_turn _helix lactose operon repressor BF17_04610 SM00382 ATPases associated with a variety of cellular activities BF17_04625 SM00869 Autotransporter beta-domain BF17_04660 SM00342 helix_turn_helix, arabinose operon control protein BF17_04785 SM00912 haemagglutination activity domain BF17_04825 SM00990 BF17_04825 BF17_04840 SM00327 von Willebrand factor (vWF) type A domain BF17_04850 SM00327 von Willebrand factor (vWF) type A domain BF17_04855 SM00327 von Willebrand factor (vWF) type A domain BF17_04865 SM00220 Serine/Threonine protein kinases, catalytic domain BF17_04910 SM00869 Autotransporter beta-domain BF17_04935 SM00858 BF17_04935 BF17_04955 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF17_04955 SM00895 BF17_04955 BF17_05050 SM00749 bacterial OsmY and nodulation domain BF17_05070 SM00073 Histidine Phosphotransfer domain BF17_05070 SM00091 PAS domain BF17_05070 SM00387 Histidine kinase-like ATPases BF17_05070 SM00388 His Kinase A (phosphoacceptor) domain BF17_05070 SM00448 cheY-homologous receiver domain BF17_05075 SM00729 Elongator protein 3, MiaB family, Radical SAM BF17_05130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF17_05135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF17_05175 SM00382 ATPases associated with a variety of cellular activities BF17_05185 SM00116 Domain in cystathionine beta-synthase and other proteins. BF17_05205 SM00382 ATPases associated with a variety of cellular activities BF17_05255 SM00354 helix_turn _helix lactose operon repressor BF17_05265 SM00642 Alpha-amylase domain BF17_05410 SM00316 Ribosomal protein S1-like RNA-binding domain BF17_05435 SM00052 Putative diguanylate phosphodiesterase BF17_05435 SM00267 diguanylate cyclase BF17_05440 SM00829 Enoylreductase BF17_05465 SM00878 Biotin carboxylase C-terminal domain BF17_05530 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF17_05550 SM00357 Cold shock protein domain BF17_05555 SM00357 Cold shock protein domain BF17_05595 SM00382 ATPases associated with a variety of cellular activities BF17_05650 SM00062 Bacterial periplasmic substrate-binding proteins BF17_05705 SM00530 Helix-turn-helix XRE-family like proteins BF17_05765 SM00530 Helix-turn-helix XRE-family like proteins BF17_05830 SM00382 ATPases associated with a variety of cellular activities BF17_05830 SM01086 C-terminal, D2-small domain, of ClpB protein BF17_05900 SM00382 ATPases associated with a variety of cellular activities BF17_05950 SM00912 haemagglutination activity domain BF17_05955 SM01018 B12 binding domain BF17_05960 SM00346 helix_turn_helix isocitrate lyase regulation BF17_06085 SM00422 helix_turn_helix, mercury resistance BF17_06115 SM00662 RNA polymerases D BF17_06120 SM00363 S4 RNA-binding domain BF17_06120 SM01390 BF17_06120 BF17_06185 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BF17_06190 SM01374 BF17_06190 BF17_06210 SM00322 K homology RNA-binding domain BF17_06225 SM01382 BF17_06225 BF17_06225 SM01383 BF17_06225 BF17_06245 SM01403 BF17_06245 BF17_06275 SM00838 Elongation factor G C-terminus BF17_06275 SM00889 Elongation factor G, domain IV BF17_06345 SM00382 ATPases associated with a variety of cellular activities BF17_06370 SM00382 ATPases associated with a variety of cellular activities BF17_06375 SM00062 Bacterial periplasmic substrate-binding proteins BF17_06410 SM00100 Cyclic nucleotide-monophosphate binding domain BF17_06410 SM00419 helix_turn_helix, cAMP Regulatory protein BF17_06460 SM00354 helix_turn _helix lactose operon repressor BF17_06510 SM00450 Rhodanese Homology Domain BF17_06650 SM00363 S4 RNA-binding domain BF17_06665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF17_06665 SM00387 Histidine kinase-like ATPases BF17_06665 SM00388 His Kinase A (phosphoacceptor) domain BF17_06670 SM00448 cheY-homologous receiver domain BF17_06670 SM00862 Transcriptional regulatory protein, C terminal BF17_06690 SM00899 BF17_06690 BF17_06745 SM00421 helix_turn_helix, Lux Regulon BF17_06750 SM00450 Rhodanese Homology Domain BF17_06760 SM00420 helix_turn_helix, Deoxyribose operon repressor BF17_06760 SM01134 BF17_06760 BF17_06800 SM00642 Alpha-amylase domain BF17_06805 SM00642 Alpha-amylase domain BF17_06815 SM00257 Lysin motif BF17_06815 SM00634 Bacterial Ig-like domain (group 1) BF17_06835 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF17_06865 SM00354 helix_turn _helix lactose operon repressor BF17_06895 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF17_06900 SM00235 Zinc-dependent metalloprotease BF17_06970 SM00710 Parallel beta-helix repeats BF17_06970 SM00869 Autotransporter beta-domain BF17_06990 SM00052 Putative diguanylate phosphodiesterase BF17_07030 SM00052 Putative diguanylate phosphodiesterase BF17_07030 SM00267 diguanylate cyclase BF17_07040 SM00382 ATPases associated with a variety of cellular activities BF17_07045 SM00382 ATPases associated with a variety of cellular activities BF17_07080 SM00912 haemagglutination activity domain BF17_07095 SM00387 Histidine kinase-like ATPases BF17_07100 SM00421 helix_turn_helix, Lux Regulon BF17_07100 SM00448 cheY-homologous receiver domain BF17_07175 SM00382 ATPases associated with a variety of cellular activities BF17_07185 SM00530 Helix-turn-helix XRE-family like proteins BF17_07240 SM00778 Zinc-binding domain of primase-helicase BF17_07240 SM00885 D5 N terminal like BF17_07280 SM00778 Zinc-binding domain of primase-helicase BF17_07280 SM00885 D5 N terminal like BF17_07345 SM00342 helix_turn_helix, arabinose operon control protein BF17_07355 SM00382 ATPases associated with a variety of cellular activities BF17_07455 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF17_07470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF17_07570 SM00642 Alpha-amylase domain BF17_07640 SM00387 Histidine kinase-like ATPases BF17_07640 SM00433 TopoisomeraseII BF17_07655 SM00480 DNA polymerase III beta subunit BF17_07660 SM00382 ATPases associated with a variety of cellular activities BF17_07660 SM00760 Bacterial dnaA protein helix-turn-helix domain BF17_07675 SM01234 BF17_07675 BF17_07715 SM00062 Bacterial periplasmic substrate-binding proteins BF17_07730 SM00382 ATPases associated with a variety of cellular activities BF17_07765 SM00382 ATPases associated with a variety of cellular activities BF17_07810 SM01228 BF17_07810 BF17_07820 SM00344 helix_turn_helix ASNC type BF17_07830 SM00327 von Willebrand factor (vWF) type A domain BF17_07835 SM00382 ATPases associated with a variety of cellular activities BF17_07850 SM00382 ATPases associated with a variety of cellular activities BF17_07870 SM00354 helix_turn _helix lactose operon repressor BF17_07880 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF17_07880 SM00895 BF17_07880 BF17_07970 SM00729 Elongator protein 3, MiaB family, Radical SAM BF17_07975 SM00382 ATPases associated with a variety of cellular activities BF17_07975 SM00448 cheY-homologous receiver domain BF17_07980 SM00091 PAS domain BF17_07980 SM00387 Histidine kinase-like ATPases BF17_07980 SM00388 His Kinase A (phosphoacceptor) domain BF17_07985 SM01230 BF17_07985 BF17_08030 SM00487 DEAD-like helicases superfamily BF17_08030 SM00490 helicase superfamily c-terminal domain BF17_08040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF17_08040 SM00954 Region found in RelA / SpoT proteins BF17_08045 SM01409 BF17_08045 BF17_08050 SM00072 Guanylate kinase homologues. BF17_08055 SM00532 Ligase N family BF17_08180 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BF17_08180 SM01232 BF17_08180 BF17_08220 SM00829 Enoylreductase BF17_08245 SM00450 Rhodanese Homology Domain BF17_08265 SM00971 Serine acetyltransferase, N-terminal BF17_08275 SM00342 helix_turn_helix, arabinose operon control protein BF17_08280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF17_08280 SM00387 Histidine kinase-like ATPases BF17_08280 SM00388 His Kinase A (phosphoacceptor) domain BF17_08285 SM00448 cheY-homologous receiver domain BF17_08285 SM00862 Transcriptional regulatory protein, C terminal BF17_08305 SM00670 Large family of predicted nucleotide-binding domains BF17_08390 SM00382 ATPases associated with a variety of cellular activities BF17_08425 SM00382 ATPases associated with a variety of cellular activities BF17_08425 SM01086 C-terminal, D2-small domain, of ClpB protein BF17_08440 SM00354 helix_turn _helix lactose operon repressor BF17_08450 SM00487 DEAD-like helicases superfamily BF17_08450 SM00490 helicase superfamily c-terminal domain BF17_08500 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF17_08530 SM00382 ATPases associated with a variety of cellular activities BF17_08630 SM00382 ATPases associated with a variety of cellular activities BF17_08655 SM00382 ATPases associated with a variety of cellular activities BF17_08810 SM00060 Fibronectin type 3 domain BF17_08820 SM00487 DEAD-like helicases superfamily BF17_08820 SM00490 helicase superfamily c-terminal domain BF17_08830 SM00357 Cold shock protein domain BF17_08830 SM00382 ATPases associated with a variety of cellular activities BF17_08830 SM00959 Rho termination factor, N-terminal domain BF17_08850 SM00984 UDP binding domain BF17_08975 SM01219 BF17_08975 BF17_09045 SM00341 Helicase and RNase D C-terminal BF17_09045 SM00487 DEAD-like helicases superfamily BF17_09045 SM00490 helicase superfamily c-terminal domain BF17_09045 SM00956 BF17_09045 BF17_09155 SM00382 ATPases associated with a variety of cellular activities BF17_09155 SM00962 SRP54-type protein, GTPase domain BF17_09155 SM00963 SRP54-type protein, helical bundle domain BF17_09160 SM00382 ATPases associated with a variety of cellular activities BF17_09195 SM00382 ATPases associated with a variety of cellular activities BF17_09200 SM00382 ATPases associated with a variety of cellular activities BF17_09255 SM00382 ATPases associated with a variety of cellular activities BF17_09275 SM00530 Helix-turn-helix XRE-family like proteins BF17_09360 SM01004 Delta-aminolevulinic acid dehydratase BF17_09365 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BF17_09480 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BF17_09480 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BF17_09485 SM00649 Ribosomal protein L11/L12 BF17_09515 SM00663 RNA polymerase I subunit A N-terminus BF17_09520 SM00876 Biotin and Thiamin Synthesis associated domain BF17_09575 SM00411 bacterial (prokaryotic) histone like domain BF17_09585 SM01209 BF17_09585 BF17_09585 SM01210 BF17_09585 BF17_09590 SM00798 AICARFT/IMPCHase bienzyme BF17_09590 SM00851 MGS-like domain BF17_09665 SM00421 helix_turn_helix, Lux Regulon BF17_09665 SM00448 cheY-homologous receiver domain BF17_09695 SM00342 helix_turn_helix, arabinose operon control protein BF17_09735 SM00382 ATPases associated with a variety of cellular activities BF17_09795 SM00382 ATPases associated with a variety of cellular activities BF17_09835 SM00729 Elongator protein 3, MiaB family, Radical SAM BF17_09925 SM00060 Fibronectin type 3 domain BF17_09930 SM00869 Autotransporter beta-domain BF17_09945 SM00563 Phosphate acyltransferases BF17_09975 SM00829 Enoylreductase BF17_09980 SM00382 ATPases associated with a variety of cellular activities BF17_09985 SM01005 Alanine racemase, C-terminal domain BF17_10060 SM01007 Class II Aldolase and Adducin N-terminal domain BF17_10080 SM00342 helix_turn_helix, arabinose operon control protein BF17_10085 SM00342 helix_turn_helix, arabinose operon control protein BF17_10160 SM01276 BF17_10160 BF17_10185 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF17_10215 SM00883 Chaperonin 10 Kd subunit BF17_10235 SM00841 Elongation factor P, C-terminal BF17_10235 SM01185 BF17_10235 BF17_10290 SM00479 BF17_10290 BF17_10325 SM00257 Lysin motif BF17_10325 SM00646 BF17_10325 BF17_10330 SM00853 MutL C terminal dimerisation domain BF17_10330 SM01340 BF17_10330 BF17_10350 SM00244 prohibitin homologues BF17_10355 SM00244 prohibitin homologues BF17_10365 SM00788 Adenylosuccinate synthetase BF17_10375 SM00316 Ribosomal protein S1-like RNA-binding domain BF17_10375 SM00357 Cold shock protein domain BF17_10375 SM00955 BF17_10375 BF17_10380 SM00967 RNA 2'-O ribose methyltransferase substrate binding BF17_10470 SM00116 Domain in cystathionine beta-synthase and other proteins. BF17_10470 SM01091 Transporter associated domain BF17_10560 SM00778 Zinc-binding domain of primase-helicase BF17_10590 SM00387 Histidine kinase-like ATPases BF17_10590 SM00388 His Kinase A (phosphoacceptor) domain BF17_10595 SM00448 cheY-homologous receiver domain BF17_10595 SM00862 Transcriptional regulatory protein, C terminal BF17_10610 SM01103 BF17_10610 BF17_10620 SM00382 ATPases associated with a variety of cellular activities BF17_10655 SM00316 Ribosomal protein S1-like RNA-binding domain BF17_10655 SM00322 K homology RNA-binding domain BF17_10675 SM01387 BF17_10675 BF17_10680 SM00316 Ribosomal protein S1-like RNA-binding domain BF17_10680 SM00322 K homology RNA-binding domain BF17_10685 SM00028 Tetratricopeptide repeats BF17_10690 SM00487 DEAD-like helicases superfamily BF17_10690 SM00490 helicase superfamily c-terminal domain BF17_10750 SM00382 ATPases associated with a variety of cellular activities BF17_10770 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF17_10775 SM00849 Metallo-beta-lactamase superfamily BF17_10780 SM00072 Guanylate kinase homologues. BF17_10790 SM00382 ATPases associated with a variety of cellular activities BF17_10795 SM00382 ATPases associated with a variety of cellular activities BF17_10820 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF17_10820 SM00866 BF17_10820 BF17_10835 SM00382 ATPases associated with a variety of cellular activities BF17_10840 SM00382 ATPases associated with a variety of cellular activities BF17_10935 SM00530 Helix-turn-helix XRE-family like proteins BF17_10995 SM00448 cheY-homologous receiver domain BF17_10995 SM00862 Transcriptional regulatory protein, C terminal BF17_11000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF17_11000 SM00387 Histidine kinase-like ATPases BF17_11000 SM00388 His Kinase A (phosphoacceptor) domain BF17_11015 SM01133 BF17_11015 BF17_11035 SM00382 ATPases associated with a variety of cellular activities BF17_11080 SM00450 Rhodanese Homology Domain BF17_11110 SM00267 diguanylate cyclase BF17_11155 SM00749 bacterial OsmY and nodulation domain BF17_11180 SM01133 BF17_11180 BF17_11210 SM00382 ATPases associated with a variety of cellular activities BF17_11215 SM00530 Helix-turn-helix XRE-family like proteins BF17_11230 SM00382 ATPases associated with a variety of cellular activities BF17_11240 SM00267 diguanylate cyclase BF17_11250 SM00831 Cation transporter/ATPase, N-terminus BF17_11270 SM00855 Phosphoglycerate mutase family BF17_11275 SM00342 helix_turn_helix, arabinose operon control protein BF17_11275 SM00871 Bacterial transcription activator, effector binding domain BF17_11285 SM00448 cheY-homologous receiver domain BF17_11285 SM00862 Transcriptional regulatory protein, C terminal BF17_11315 SM00852 Probable molybdopterin binding domain BF17_11340 SM00271 DnaJ molecular chaperone homology domain BF17_11360 SM00904 Riboflavin kinase BF17_11390 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BF17_11395 SM00851 MGS-like domain BF17_11395 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BF17_11445 SM00650 Ribosomal RNA adenine dimethylases BF17_11465 SM00271 DnaJ molecular chaperone homology domain BF17_11515 SM00382 ATPases associated with a variety of cellular activities BF17_11515 SM01086 C-terminal, D2-small domain, of ClpB protein BF17_11575 SM00487 DEAD-like helicases superfamily BF17_11575 SM00490 helicase superfamily c-terminal domain BF17_11580 SM00486 DNA polymerase type-B family BF17_11590 SM00382 ATPases associated with a variety of cellular activities BF17_11640 SM01329 BF17_11640 BF17_11645 SM00917 LeuA allosteric (dimerisation) domain BF17_11675 SM00354 helix_turn _helix lactose operon repressor BF17_11750 SM00842 Cell division protein FtsA BF17_11755 SM00864 Tubulin/FtsZ family, GTPase domain BF17_11755 SM00865 Tubulin/FtsZ family, C-terminal domain BF17_11775 SM00957 SecA DEAD-like domain BF17_11775 SM00958 SecA preprotein cross-linking domain BF17_11800 SM01240 BF17_11800 BF17_11825 SM00644 BF17_11825 BF17_11840 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF17_11840 SM00895 BF17_11840 BF17_11910 SM00947 Carbonic anhydrase BF17_11915 SM00382 ATPases associated with a variety of cellular activities BF17_11980 SM00487 DEAD-like helicases superfamily BF17_11980 SM00490 helicase superfamily c-terminal domain BF17_11980 SM00847 Helicase associated domain (HA2) Add an annotation BF17_11990 SM00382 ATPases associated with a variety of cellular activities BF17_12035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF17_12040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF17_12065 SM00954 Region found in RelA / SpoT proteins BF17_12080 SM01192 BF17_12080 BF17_12080 SM01193 BF17_12080 BF17_12180 SM00257 Lysin motif BF17_12190 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BF17_12190 SM00534 ATPase domain of DNA mismatch repair MUTS family BF17_12245 SM00829 Enoylreductase BF17_12260 SM01120 BF17_12260 BF17_12280 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF17_12295 SM00062 Bacterial periplasmic substrate-binding proteins BF17_12300 SM01235 BF17_12300 BF17_12355 SM00382 ATPases associated with a variety of cellular activities BF17_12365 SM00420 helix_turn_helix, Deoxyribose operon repressor BF17_12365 SM01134 BF17_12365 BF17_12370 SM01007 Class II Aldolase and Adducin N-terminal domain BF17_12375 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF17_12420 SM00382 ATPases associated with a variety of cellular activities BF17_12435 SM00861 Transketolase, pyrimidine binding domain BF17_12470 SM00382 ATPases associated with a variety of cellular activities BF17_12480 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF17_12530 SM01091 Transporter associated domain BF17_12540 SM00382 ATPases associated with a variety of cellular activities BF17_12540 SM00962 SRP54-type protein, GTPase domain BF17_12540 SM00963 SRP54-type protein, helical bundle domain BF17_12575 SM00448 cheY-homologous receiver domain BF17_12575 SM00850 LytTr DNA-binding domain BF17_12585 SM00830 Chorismate mutase type II BF17_12590 SM00830 Chorismate mutase type II BF17_12605 SM00363 S4 RNA-binding domain BF17_12615 SM00382 ATPases associated with a variety of cellular activities BF17_12615 SM01086 C-terminal, D2-small domain, of ClpB protein BF17_12660 SM00155 Phospholipase D. Active site motifs. BF17_12665 SM00881 CoA binding domain BF17_12670 SM01144 BF17_12670 BF17_12680 SM00967 RNA 2'-O ribose methyltransferase substrate binding BF17_12695 SM00347 helix_turn_helix multiple antibiotic resistance protein BF17_12725 SM00062 Bacterial periplasmic substrate-binding proteins BF17_12740 SM00382 ATPases associated with a variety of cellular activities BF17_12765 SM01007 Class II Aldolase and Adducin N-terminal domain BF17_12795 SM00710 Parallel beta-helix repeats BF17_12795 SM00912 haemagglutination activity domain BF17_12840 SM00900 BF17_12840 BF17_12890 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BF17_12925 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BF17_12990 SM00448 cheY-homologous receiver domain BF17_12990 SM00862 Transcriptional regulatory protein, C terminal BF17_12995 SM00091 PAS domain BF17_12995 SM00387 Histidine kinase-like ATPases BF17_12995 SM00388 His Kinase A (phosphoacceptor) domain BF17_13015 SM00642 Alpha-amylase domain BF17_13050 SM01323 BF17_13050 BF17_13105 SM00861 Transketolase, pyrimidine binding domain BF17_13120 SM00981 BF17_13120 BF17_13205 SM00382 ATPases associated with a variety of cellular activities BF17_13205 SM00994 ClpX C4-type zinc finger BF17_13205 SM01086 C-terminal, D2-small domain, of ClpB protein BF17_13210 SM00382 ATPases associated with a variety of cellular activities BF17_13210 SM00464 Found in ATP-dependent protease La (LON) BF17_13215 SM00411 bacterial (prokaryotic) histone like domain BF17_13255 SM00344 helix_turn_helix ASNC type BF17_13260 SM00382 ATPases associated with a variety of cellular activities BF17_13265 SM00382 ATPases associated with a variety of cellular activities BF17_13270 SM00938 Nitrogen regulatory protein P-II BF17_13365 SM00382 ATPases associated with a variety of cellular activities BF17_13375 SM00493 BF17_13375 BF17_13380 SM00387 Histidine kinase-like ATPases BF17_13555 SM00422 helix_turn_helix, mercury resistance BF17_13565 SM00244 prohibitin homologues BF17_13575 SM00822 BF17_13575 BF17_13585 SM00382 ATPases associated with a variety of cellular activities BF17_13600 SM01001 AIR carboxylase BF17_13615 SM00840 BF17_13615 BF17_13800 SM01217 BF17_13800 BF17_13815 SM00363 S4 RNA-binding domain BF17_13820 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BF17_13840 SM00869 Autotransporter beta-domain BF17_13880 SM01359 BF17_13880 BF17_13880 SM01360 BF17_13880 BF17_13910 SM00382 ATPases associated with a variety of cellular activities BF17_13945 SM00382 ATPases associated with a variety of cellular activities BF17_13975 SM00421 helix_turn_helix, Lux Regulon BF17_13990 SM00357 Cold shock protein domain BF17_14005 SM00729 Elongator protein 3, MiaB family, Radical SAM BF17_14020 SM00936 Penicillin-binding protein 5, C-terminal domain BF17_14075 SM00382 ATPases associated with a variety of cellular activities BF17_14090 SM00062 Bacterial periplasmic substrate-binding proteins BF17_14100 SM00116 Domain in cystathionine beta-synthase and other proteins. BF17_14100 SM01091 Transporter associated domain BF17_14115 SM00729 Elongator protein 3, MiaB family, Radical SAM BF17_14195 SM01081 Putative carbohydrate binding domain BF17_14295 SM00530 Helix-turn-helix XRE-family like proteins BF17_14410 SM00507 HNH nucleases BF17_14460 SM00635 Bacterial Ig-like domain 2 BF17_14585 SM00861 Transketolase, pyrimidine binding domain BF17_14600 SM00881 CoA binding domain BF17_14720 SM00855 Phosphoglycerate mutase family BF17_14760 SM00382 ATPases associated with a variety of cellular activities BF17_14785 SM00382 ATPases associated with a variety of cellular activities BF17_14805 SM00729 Elongator protein 3, MiaB family, Radical SAM BF17_14805 SM00876 Biotin and Thiamin Synthesis associated domain BF17_14825 SM00382 ATPases associated with a variety of cellular activities BF17_14835 SM00487 DEAD-like helicases superfamily BF17_14835 SM00490 helicase superfamily c-terminal domain BF17_14850 SM00729 Elongator protein 3, MiaB family, Radical SAM BF17_14920 SM00091 PAS domain BF17_14920 SM00387 Histidine kinase-like ATPases BF17_14920 SM00388 His Kinase A (phosphoacceptor) domain BF17_14925 SM00382 ATPases associated with a variety of cellular activities BF17_14925 SM00448 cheY-homologous receiver domain BF17_14940 SM00382 ATPases associated with a variety of cellular activities BF17_14955 SM00487 DEAD-like helicases superfamily BF17_14955 SM00490 helicase superfamily c-terminal domain BF17_14995 SM00490 helicase superfamily c-terminal domain BF17_15030 SM01118 BF17_15030 BF17_15035 SM00507 HNH nucleases BF17_15050 SM00382 ATPases associated with a variety of cellular activities BF17_15095 SM00382 ATPases associated with a variety of cellular activities BF17_15110 SM00450 Rhodanese Homology Domain BF17_15125 SM00382 ATPases associated with a variety of cellular activities BF17_15165 SM00487 DEAD-like helicases superfamily BF17_15165 SM00488 BF17_15165 BF17_15165 SM00491 BF17_15165 BF17_15195 SM00852 Probable molybdopterin binding domain BF17_15225 SM00434 DNA Topoisomerase IV BF17_15235 SM00387 Histidine kinase-like ATPases BF17_15235 SM00388 His Kinase A (phosphoacceptor) domain BF17_15235 SM00448 cheY-homologous receiver domain BF17_15240 SM00421 helix_turn_helix, Lux Regulon BF17_15240 SM00448 cheY-homologous receiver domain BF17_15245 SM00387 Histidine kinase-like ATPases BF17_15300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF17_15300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF17_15315 SM00530 Helix-turn-helix XRE-family like proteins BF17_15330 SM01007 Class II Aldolase and Adducin N-terminal domain BF17_15335 SM00420 helix_turn_helix, Deoxyribose operon repressor BF17_15335 SM01134 BF17_15335 BF17_15470 SM00487 DEAD-like helicases superfamily BF17_15470 SM00490 helicase superfamily c-terminal domain BF17_15475 SM00363 S4 RNA-binding domain BF17_15490 SM00382 ATPases associated with a variety of cellular activities BF17_15510 SM00052 Putative diguanylate phosphodiesterase BF17_15530 SM00014 Acid phosphatase homologues BF17_15550 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF17_15550 SM00895 BF17_15550 BF17_15565 SM00841 Elongation factor P, C-terminal BF17_15565 SM01185 BF17_15565 BF17_15625 SM00382 ATPases associated with a variety of cellular activities BF17_15655 SM00862 Transcriptional regulatory protein, C terminal BF17_15685 SM00518 AP endonuclease family 2 BF17_15715 SM00382 ATPases associated with a variety of cellular activities BF17_15745 SM00382 ATPases associated with a variety of cellular activities BF17_15745 SM00930 BF17_15745 BF17_15755 SM00936 Penicillin-binding protein 5, C-terminal domain BF17_15775 SM00420 helix_turn_helix, Deoxyribose operon repressor BF17_15775 SM01134 BF17_15775 BF17_15780 SM01133 BF17_15780 BF17_15785 SM00014 Acid phosphatase homologues BF17_15830 SM00382 ATPases associated with a variety of cellular activities BF17_15855 SM00062 Bacterial periplasmic substrate-binding proteins BF17_15855 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF17_15865 SM00244 prohibitin homologues BF17_15905 SM00382 ATPases associated with a variety of cellular activities BF17_15935 SM00062 Bacterial periplasmic substrate-binding proteins BF17_15935 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF17_15940 SM00382 ATPases associated with a variety of cellular activities BF17_15945 SM00830 Chorismate mutase type II BF17_16010 SM00382 ATPases associated with a variety of cellular activities BF17_16015 SM00357 Cold shock protein domain BF17_16025 SM00382 ATPases associated with a variety of cellular activities BF17_16025 SM01086 C-terminal, D2-small domain, of ClpB protein BF17_16030 SM00316 Ribosomal protein S1-like RNA-binding domain BF17_16040 SM00382 ATPases associated with a variety of cellular activities BF17_16045 SM00382 ATPases associated with a variety of cellular activities BF17_16055 SM00344 helix_turn_helix ASNC type BF17_16075 SM00382 ATPases associated with a variety of cellular activities BF17_16115 SM00870 BF17_16115 BF17_16145 SM00316 Ribosomal protein S1-like RNA-binding domain BF17_16150 SM00411 bacterial (prokaryotic) histone like domain BF17_16160 SM00849 Metallo-beta-lactamase superfamily BF17_16165 SM00382 ATPases associated with a variety of cellular activities BF17_16175 SM01150 BF17_16175 BF17_16180 SM00357 Cold shock protein domain BF17_16280 SM00849 Metallo-beta-lactamase superfamily BF17_16330 SM00981 BF17_16330 BF17_16335 SM00382 ATPases associated with a variety of cellular activities BF17_16355 SM00825 Beta-ketoacyl synthase BF17_16410 SM00851 MGS-like domain BF17_16420 SM00881 CoA binding domain BF17_16425 SM00992 Hemimethylated DNA-binding protein YccV like BF17_16430 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BF17_16560 SM00530 Helix-turn-helix XRE-family like proteins BF17_16565 SM00530 Helix-turn-helix XRE-family like proteins BF17_16590 SM00382 ATPases associated with a variety of cellular activities BF17_16825 SM00825 Beta-ketoacyl synthase BF17_16865 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BF17_16880 SM00382 ATPases associated with a variety of cellular activities BF17_16895 SM00852 Probable molybdopterin binding domain BF17_16910 SM00382 ATPases associated with a variety of cellular activities BF17_16935 SM00829 Enoylreductase BF17_16965 SM00382 ATPases associated with a variety of cellular activities BF17_16980 SM00919 Malic enzyme, NAD binding domain BF17_16980 SM01274 BF17_16980 BF17_17045 SM01091 Transporter associated domain BF17_17065 SM01006 Siderophore biosynthesis protein domain BF17_17075 SM00382 ATPases associated with a variety of cellular activities BF17_17120 SM01350 BF17_17120 BF17_17180 SM00382 ATPases associated with a variety of cellular activities BF17_17215 SM00634 Bacterial Ig-like domain (group 1) BF17_17250 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF17_17340 SM00090 RIO-like kinase BF17_17345 SM00382 ATPases associated with a variety of cellular activities BF17_17360 SM00342 helix_turn_helix, arabinose operon control protein BF17_17410 SM00357 Cold shock protein domain BF17_17430 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BF17_17430 SM00091 PAS domain BF17_17430 SM00267 diguanylate cyclase BF17_17465 SM01091 Transporter associated domain BF17_17500 SM00487 DEAD-like helicases superfamily BF17_17500 SM00490 helicase superfamily c-terminal domain BF17_17510 SM01022 BF17_17510 BF17_17600 SM00634 Bacterial Ig-like domain (group 1) BF17_17615 SM00858 BF17_17615 BF17_17660 SM00047 Lysozyme subfamily 2 BF17_17680 SM01007 Class II Aldolase and Adducin N-terminal domain BF17_17695 SM00382 ATPases associated with a variety of cellular activities BF17_17760 SM00382 ATPases associated with a variety of cellular activities BF17_17800 SM00478 endonuclease III BF17_17805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF17_17810 SM00342 helix_turn_helix, arabinose operon control protein BF17_17855 SM00062 Bacterial periplasmic substrate-binding proteins BF17_17855 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF17_17865 SM00382 ATPases associated with a variety of cellular activities BF17_17945 SM00421 helix_turn_helix, Lux Regulon BF17_17945 SM00448 cheY-homologous receiver domain BF17_17950 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF17_17950 SM00465 GIY-YIG type nucleases (URI domain) BF17_18090 SM00530 Helix-turn-helix XRE-family like proteins BF17_18120 SM00843 BF17_18120 BF17_18160 SM00990 BF17_18160 BF17_18355 SM00869 Autotransporter beta-domain BF17_18415 SM00421 helix_turn_helix, Lux Regulon BF17_18415 SM00448 cheY-homologous receiver domain BF17_18420 SM01012 BF17_18420 BF17_18475 SM00420 helix_turn_helix, Deoxyribose operon repressor BF17_18475 SM01134 BF17_18475 BF17_18530 SM00382 ATPases associated with a variety of cellular activities BF17_18600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF17_18600 SM00387 Histidine kinase-like ATPases BF17_18620 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF17_18680 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF17_18680 SM00866 BF17_18680 BF17_18715 SM00849 Metallo-beta-lactamase superfamily BF17_18785 SM00671 Sel1-like repeats. BF17_18860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF17_18860 SM00387 Histidine kinase-like ATPases BF17_18860 SM00388 His Kinase A (phosphoacceptor) domain BF17_18880 SM00448 cheY-homologous receiver domain BF17_18880 SM00862 Transcriptional regulatory protein, C terminal BF17_18935 SM00843 BF17_18935 BF17_19045 SM01400 BF17_19045 BF17_19130 SM00481 DNA polymerase alpha chain like domain BF17_19175 SM00912 haemagglutination activity domain BF17_19180 SM00836 DALR anticodon binding domain BF17_19180 SM01016 Arginyl tRNA synthetase N terminal dom BF17_19235 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF17_19240 SM00382 ATPases associated with a variety of cellular activities BF17_19250 SM00382 ATPases associated with a variety of cellular activities BF17_19260 SM00257 Lysin motif BF17_19305 SM00487 DEAD-like helicases superfamily BF17_19305 SM00491 BF17_19305 BF17_19325 SM00341 Helicase and RNase D C-terminal BF17_19325 SM00474 3'-5' exonuclease BF17_19405 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF17_19445 SM00763 PrkA AAA domain BF17_19460 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF17_19480 SM00870 BF17_19480 BF17_19500 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF17_19500 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF17_19500 SM00493 BF17_19500 BF17_19545 SM00448 cheY-homologous receiver domain BF17_19555 SM00528 Domain in histone-like proteins of HNS family BF17_19600 SM00382 ATPases associated with a variety of cellular activities BF17_19605 SM00382 ATPases associated with a variety of cellular activities BF17_19620 SM00155 Phospholipase D. Active site motifs. BF17_19665 SM00749 bacterial OsmY and nodulation domain BF17_19720 SM00363 S4 RNA-binding domain BF17_19730 SM00822 BF17_19730 BF17_19745 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF17_19745 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF17_19745 SM00493 BF17_19745 BF17_19770 SM00014 Acid phosphatase homologues BF17_19780 SM00028 Tetratricopeptide repeats BF17_19790 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BF17_19805 SM01007 Class II Aldolase and Adducin N-terminal domain BF17_19835 SM00357 Cold shock protein domain BF17_19835 SM00955 BF17_19835 BF17_19850 SM00478 endonuclease III BF17_19850 SM00525 BF17_19850 BF17_19860 SM00900 BF17_19860 BF17_19870 SM00342 helix_turn_helix, arabinose operon control protein BF17_19895 SM00382 ATPases associated with a variety of cellular activities BF17_19910 SM00382 ATPases associated with a variety of cellular activities BF17_19930 SM00382 ATPases associated with a variety of cellular activities BF17_19940 SM00342 helix_turn_helix, arabinose operon control protein BF17_19965 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF17_19965 SM00866 BF17_19965 BF17_20040 SM00382 ATPases associated with a variety of cellular activities BF17_20080 SM00354 helix_turn _helix lactose operon repressor BF17_20100 SM00382 ATPases associated with a variety of cellular activities BF17_20120 SM00382 ATPases associated with a variety of cellular activities BF17_20170 SM00098 Alkaline phosphatase homologues BF17_20180 SM00100 Cyclic nucleotide-monophosphate binding domain BF17_20180 SM00419 helix_turn_helix, cAMP Regulatory protein BF17_20195 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BF17_20195 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BF17_20215 SM00448 cheY-homologous receiver domain BF17_20215 SM00862 Transcriptional regulatory protein, C terminal BF17_20220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF17_20220 SM00387 Histidine kinase-like ATPases BF17_20220 SM00388 His Kinase A (phosphoacceptor) domain BF17_20235 SM00867 YceI-like domain BF17_20255 SM00020 Trypsin-like serine protease BF17_20260 SM00530 Helix-turn-helix XRE-family like proteins BF17_20270 SM00382 ATPases associated with a variety of cellular activities BF17_20270 SM00487 DEAD-like helicases superfamily BF17_20270 SM00490 helicase superfamily c-terminal domain BF17_20270 SM00847 Helicase associated domain (HA2) Add an annotation BF17_20340 SM00890 Domain of unknown function BF17_20365 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF17_20375 SM00091 PAS domain BF17_20375 SM00382 ATPases associated with a variety of cellular activities BF17_20385 SM00953 BF17_20385 BF17_20420 SM00382 ATPases associated with a variety of cellular activities BF17_20440 SM00382 ATPases associated with a variety of cellular activities BF17_20445 SM00382 ATPases associated with a variety of cellular activities BF17_20490 SM00363 S4 RNA-binding domain BF17_20515 SM00347 helix_turn_helix multiple antibiotic resistance protein BF17_20555 SM00479 BF17_20555 BF17_20580 SM00354 helix_turn _helix lactose operon repressor BF17_20655 SM00382 ATPases associated with a variety of cellular activities BF17_20755 SM00382 ATPases associated with a variety of cellular activities BF17_20770 SM00411 bacterial (prokaryotic) histone like domain BF17_20775 SM00873 B3/4 domain BF17_20775 SM00874 tRNA synthetase B5 domain BF17_20775 SM00896 Ferredoxin-fold anticodon binding domain BF17_20805 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF17_20840 SM00382 ATPases associated with a variety of cellular activities BF17_20935 SM00382 ATPases associated with a variety of cellular activities BF17_20960 SM00644 BF17_20960 BF17_20965 SM00346 helix_turn_helix isocitrate lyase regulation BF17_21010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF17_21010 SM00245 tail specific protease BF17_21015 SM00945 ProQ/FINO family BF17_21040 SM00972 Spore Coat Protein U domain BF17_21045 SM00972 Spore Coat Protein U domain BF17_21050 SM00972 Spore Coat Protein U domain BF17_21065 SM00972 Spore Coat Protein U domain BF17_21075 SM01022 BF17_21075 BF17_21115 SM01005 Alanine racemase, C-terminal domain BF17_21165 SM00644 BF17_21165 BF17_21175 SM00448 cheY-homologous receiver domain BF17_21180 SM00448 cheY-homologous receiver domain BF17_21185 SM00138 Methyltransferase, chemotaxis proteins BF17_21190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF17_21190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF17_21190 SM00319 Homologues of the ligand binding domain of Tar BF17_21210 SM00260 Two component signalling adaptor domain BF17_21215 SM00073 Histidine Phosphotransfer domain BF17_21215 SM00260 Two component signalling adaptor domain BF17_21215 SM00387 Histidine kinase-like ATPases BF17_21215 SM01231 BF17_21215 BF17_21240 SM00831 Cation transporter/ATPase, N-terminus BF17_21250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF17_21250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF17_21250 SM00319 Homologues of the ligand binding domain of Tar BF17_21260 SM00357 Cold shock protein domain BF17_21265 SM01038 Beta galactosidase small chain BF17_21270 SM00829 Enoylreductase BF17_21280 SM00344 helix_turn_helix ASNC type BF17_21305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BF17_21305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF17_21315 SM00354 helix_turn _helix lactose operon repressor BF17_21510 SM00530 Helix-turn-helix XRE-family like proteins BF17_21565 SM01329 BF17_21565 BF17_21600 SM00448 cheY-homologous receiver domain BF17_21600 SM00862 Transcriptional regulatory protein, C terminal BF17_21605 SM00387 Histidine kinase-like ATPases BF17_21605 SM00388 His Kinase A (phosphoacceptor) domain BF17_21610 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BF17_21635 SM00382 ATPases associated with a variety of cellular activities BF17_21645 SM00487 DEAD-like helicases superfamily BF17_21645 SM00490 helicase superfamily c-terminal domain BF17_21645 SM00982 BF17_21645 BF17_21645 SM01058 CarD-like/TRCF domain BF17_21735 SM00825 Beta-ketoacyl synthase BF17_21745 SM00822 BF17_21745 BF17_21750 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BF17_21780 SM00363 S4 RNA-binding domain BF17_21785 SM00316 Ribosomal protein S1-like RNA-binding domain BF17_21815 SM00421 helix_turn_helix, Lux Regulon BF17_21825 SM00450 Rhodanese Homology Domain BF17_21890 SM01091 Transporter associated domain BF17_21905 SM00421 helix_turn_helix, Lux Regulon BF17_21985 SM00354 helix_turn _helix lactose operon repressor BF17_21995 SM00382 ATPases associated with a variety of cellular activities BF17_22025 SM00530 Helix-turn-helix XRE-family like proteins BF17_22090 SM00912 haemagglutination activity domain BF17_22125 SM01329 BF17_22125 BF17_22135 SM00354 helix_turn _helix lactose operon repressor BF17_22145 SM00382 ATPases associated with a variety of cellular activities BF17_22155 SM00829 Enoylreductase BF17_22215 SM00062 Bacterial periplasmic substrate-binding proteins BF17_22215 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF17_22225 SM00382 ATPases associated with a variety of cellular activities BF17_22230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF17_22260 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF17_22355 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF17_22355 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF17_22360 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BF17_22405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF17_22445 SM00354 helix_turn _helix lactose operon repressor BF17_22475 SM00052 Putative diguanylate phosphodiesterase BF17_22490 SM00382 ATPases associated with a variety of cellular activities BF17_22505 SM00062 Bacterial periplasmic substrate-binding proteins BF17_22550 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF17_22560 SM00342 helix_turn_helix, arabinose operon control protein BF17_22585 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BF17_22585 SM00091 PAS domain BF17_22585 SM00267 diguanylate cyclase BF17_22590 SM00825 Beta-ketoacyl synthase BF17_22630 SM00463 Small MutS-related domain BF17_22640 SM00855 Phosphoglycerate mutase family BF17_22715 SM00382 ATPases associated with a variety of cellular activities BF17_22850 SM00382 ATPases associated with a variety of cellular activities BF17_22850 SM01086 C-terminal, D2-small domain, of ClpB protein BF17_22895 SM00421 helix_turn_helix, Lux Regulon BF17_22925 SM00382 ATPases associated with a variety of cellular activities BF17_23090 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF17_23090 SM00292 breast cancer carboxy-terminal domain BF17_23090 SM00532 Ligase N family BF17_23095 SM00771 ZipA, C-terminal domain (FtsZ-binding) BF17_23125 SM00450 Rhodanese Homology Domain BF17_23150 SM00327 von Willebrand factor (vWF) type A domain BF17_23155 SM00387 Histidine kinase-like ATPases BF17_23155 SM00388 His Kinase A (phosphoacceptor) domain BF17_23160 SM00448 cheY-homologous receiver domain BF17_23160 SM00862 Transcriptional regulatory protein, C terminal BF17_23170 SM00382 ATPases associated with a variety of cellular activities BF17_23215 SM01130 BF17_23215 BF17_23235 SM00869 Autotransporter beta-domain BF17_23290 SM00919 Malic enzyme, NAD binding domain BF17_23290 SM01274 BF17_23290 BF17_23325 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF17_23375 SM00382 ATPases associated with a variety of cellular activities BF17_23395 SM00028 Tetratricopeptide repeats BF17_23450 SM01130 BF17_23450