locus-tag class description D5F51_00005 PF00258 Flavodoxin D5F51_00010 PF01037 Lrp/AsnC ligand binding domain D5F51_00015 PF03590 Aspartate-ammonia ligase D5F51_00030 PF05762 VWA domain containing CoxE-like protein D5F51_00035 PF07728 AAA domain (dynein-related subfamily) D5F51_00035 PF17868 AAA lid domain D5F51_00035 PF12592 Protein of unknown function (DUF3763) D5F51_00040 PF02705 K+ potassium transporter D5F51_00045 PF05025 RbsD / FucU transport protein family D5F51_00050 PF00005 ABC transporter D5F51_00055 PF02653 Branched-chain amino acid transport system / permease component D5F51_00060 PF13407 Periplasmic binding protein domain D5F51_00065 PF00294 pfkB family carbohydrate kinase D5F51_00070 PF00356 Bacterial regulatory proteins, lacI family D5F51_00075 PF07690 Major Facilitator Superfamily D5F51_00080 PF07729 FCD domain D5F51_00080 PF00392 Bacterial regulatory proteins, gntR family D5F51_00110 PF03205 Molybdopterin guanine dinucleotide synthesis protein B D5F51_00115 PF12804 MobA-like NTP transferase domain D5F51_00120 PF06288 Protein of unknown function (DUF1040) D5F51_00125 PF01636 Phosphotransferase enzyme family D5F51_00130 PF01323 DSBA-like thioredoxin domain D5F51_00135 PF01367 5'-3' exonuclease, C-terminal SAM fold D5F51_00135 PF01612 3'-5' exonuclease D5F51_00135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D5F51_00135 PF00476 DNA polymerase family A D5F51_00140 PF01926 50S ribosome-binding GTPase D5F51_00145 PF04220 Der GTPase activator (YihI) D5F51_00155 PF04055 Radical SAM superfamily D5F51_00155 PF06969 HemN C-terminal domain D5F51_00160 PF00072 Response regulator receiver domain D5F51_00160 PF00158 Sigma-54 interaction domain D5F51_00160 PF02954 Bacterial regulatory protein, Fis family D5F51_00165 PF00989 PAS fold D5F51_00165 PF00512 His Kinase A (phospho-acceptor) domain D5F51_00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_00170 PF00120 Glutamine synthetase, catalytic domain D5F51_00170 PF03951 Glutamine synthetase, beta-Grasp domain D5F51_00180 PF13419 Haloacid dehalogenase-like hydrolase D5F51_00185 PF03631 Virulence factor BrkB D5F51_00190 PF02580 D-Tyr-tRNA(Tyr) deacylase D5F51_00195 PF00583 Acetyltransferase (GNAT) family D5F51_00195 PF09500 Putative thioesterase (yiiD_Cterm) D5F51_00200 PF13693 Winged helix-turn-helix DNA-binding D5F51_00215 PF05170 AsmA family D5F51_00220 PF00860 Permease family D5F51_00230 PF03616 Sodium/glutamate symporter D5F51_00235 PF00270 DEAD/DEAH box helicase D5F51_00235 PF00271 Helicase conserved C-terminal domain D5F51_00235 PF17191 RecG wedge domain D5F51_00240 PF00588 SpoU rRNA Methylase family D5F51_00240 PF12105 SpoU, rRNA methylase, C-terminal D5F51_00245 PF13291 ACT domain D5F51_00245 PF02824 TGS domain D5F51_00245 PF04607 Region found in RelA / SpoT proteins D5F51_00250 PF01192 RNA polymerase Rpb6 D5F51_00255 PF00625 Guanylate kinase D5F51_00260 PF03120 NAD-dependent DNA ligase OB-fold domain D5F51_00260 PF01653 NAD-dependent DNA ligase adenylation domain D5F51_00265 PF03458 UPF0126 domain D5F51_00275 PF07662 Na+ dependent nucleoside transporter C-terminus D5F51_00275 PF01773 Na+ dependent nucleoside transporter N-terminus D5F51_00275 PF07670 Nucleoside recognition D5F51_00280 PF00378 Enoyl-CoA hydratase/isomerase D5F51_00285 PF13426 PAS domain D5F51_00285 PF00563 EAL domain D5F51_00285 PF00990 Diguanylate cyclase, GGDEF domain D5F51_00290 PF03755 YicC-like family, N-terminal region D5F51_00290 PF08340 Domain of unknown function (DUF1732) D5F51_00295 PF01138 3' exoribonuclease family, domain 1 D5F51_00295 PF03725 3' exoribonuclease family, domain 2 D5F51_00300 PF00156 Phosphoribosyl transferase domain D5F51_00305 PF00440 Bacterial regulatory proteins, tetR family D5F51_00310 PF00692 dUTPase D5F51_00315 PF02441 Flavoprotein D5F51_00315 PF04127 DNA / pantothenate metabolism flavoprotein D5F51_00320 PF04002 RadC-like JAB domain D5F51_00330 PF00830 Ribosomal L28 family D5F51_00335 PF00471 Ribosomal protein L33 D5F51_00340 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D5F51_00340 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D5F51_00340 PF06827 Zinc finger found in FPG and IleRS D5F51_00345 PF01467 Cytidylyltransferase-like D5F51_00350 PF00535 Glycosyl transferase family 2 D5F51_00355 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D5F51_00360 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5F51_00365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5F51_00370 PF01370 NAD dependent epimerase/dehydratase family D5F51_00375 PF00155 Aminotransferase class I and II D5F51_00380 PF08240 Alcohol dehydrogenase GroES-like domain D5F51_00380 PF00107 Zinc-binding dehydrogenase D5F51_00385 PF04748 Divergent polysaccharide deacetylase D5F51_00390 PF01551 Peptidase family M23 D5F51_00395 PF01676 Metalloenzyme superfamily D5F51_00395 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D5F51_00400 PF00581 Rhodanese-like domain D5F51_00405 PF00462 Glutaredoxin D5F51_00410 PF02556 Preprotein translocase subunit SecB D5F51_00415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D5F51_00415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D5F51_00420 PF00132 Bacterial transferase hexapeptide (six repeats) D5F51_00420 PF06426 Serine acetyltransferase, N-terminal D5F51_00425 PF00588 SpoU rRNA Methylase family D5F51_00430 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D5F51_00430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D5F51_00430 PF02805 Metal binding domain of Ada D5F51_00430 PF12833 Helix-turn-helix domain D5F51_00435 PF16527 Two-component sensor protein CpxA, periplasmic domain D5F51_00435 PF00672 HAMP domain D5F51_00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_00435 PF00512 His Kinase A (phospho-acceptor) domain D5F51_00440 PF00072 Response regulator receiver domain D5F51_00440 PF00486 Transcriptional regulatory protein, C terminal D5F51_00445 PF07813 LTXXQ motif family protein D5F51_00450 PF01545 Cation efflux family D5F51_00450 PF16916 Dimerisation domain of Zinc Transporter D5F51_00455 PF00365 Phosphofructokinase D5F51_00475 PF00121 Triosephosphate isomerase D5F51_00480 PF07305 Protein of unknown function (DUF1454) D5F51_00485 PF05656 Protein of unknown function (DUF805) D5F51_00490 PF00970 Oxidoreductase FAD-binding domain D5F51_00490 PF00175 Oxidoreductase NAD-binding domain D5F51_00495 PF07690 Major Facilitator Superfamily D5F51_00500 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D5F51_00505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5F51_00505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5F51_00510 PF00230 Major intrinsic protein D5F51_00525 PF06005 Cell division protein ZapB D5F51_00530 PF03737 Aldolase/RraA D5F51_00535 PF01040 UbiA prenyltransferase family D5F51_00540 PF07724 AAA domain (Cdc48 subfamily) D5F51_00540 PF00004 ATPase family associated with various cellular activities (AAA) D5F51_00540 PF10431 C-terminal, D2-small domain, of ClpB protein D5F51_00545 PF00227 Proteasome subunit D5F51_00550 PF05036 Sporulation related domain D5F51_00555 PF00356 Bacterial regulatory proteins, lacI family D5F51_00565 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D5F51_00565 PF18074 Primosomal protein N C-terminal domain D5F51_00565 PF17764 3′ DNA-binding domain (3′BD) D5F51_00565 PF00271 Helicase conserved C-terminal domain D5F51_00565 PF00270 DEAD/DEAH box helicase D5F51_00570 PF01197 Ribosomal protein L31 D5F51_00575 PF01340 Met Apo-repressor, MetJ D5F51_00580 PF01053 Cys/Met metabolism PLP-dependent enzyme D5F51_00585 PF00742 Homoserine dehydrogenase D5F51_00585 PF03447 Homoserine dehydrogenase, NAD binding domain D5F51_00585 PF00696 Amino acid kinase family D5F51_00590 PF02219 Methylenetetrahydrofolate reductase D5F51_00600 PF00311 Phosphoenolpyruvate carboxylase D5F51_00605 PF01546 Peptidase family M20/M25/M40 D5F51_00605 PF07687 Peptidase dimerisation domain D5F51_00610 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5F51_00610 PF02774 Semialdehyde dehydrogenase, dimerisation domain D5F51_00615 PF00696 Amino acid kinase family D5F51_00620 PF14698 Argininosuccinate lyase C-terminal D5F51_00620 PF00206 Lyase D5F51_00650 PF00005 ABC transporter D5F51_00650 PF00664 ABC transporter transmembrane region D5F51_00655 PF00529 HlyD membrane-fusion protein of T1SS D5F51_00665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5F51_00665 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5F51_00670 PF00462 Glutaredoxin D5F51_00670 PF08534 Redoxin D5F51_00675 PF03466 LysR substrate binding domain D5F51_00675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_00680 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5F51_00680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5F51_00685 PF00440 Bacterial regulatory proteins, tetR family D5F51_00690 PF07226 Protein of unknown function (DUF1422) D5F51_00695 PF05958 tRNA (Uracil-5-)-methyltransferase D5F51_00700 PF07715 TonB-dependent Receptor Plug Domain D5F51_00700 PF00593 TonB dependent receptor D5F51_00705 PF01177 Asp/Glu/Hydantoin racemase D5F51_00750 PF13407 Periplasmic binding protein domain D5F51_00755 PF00005 ABC transporter D5F51_00760 PF02653 Branched-chain amino acid transport system / permease component D5F51_00765 PF02653 Branched-chain amino acid transport system / permease component D5F51_00770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_00770 PF03466 LysR substrate binding domain D5F51_00775 PF04219 Protein of unknown function, DUF D5F51_00780 PF01078 Magnesium chelatase, subunit ChlI D5F51_00780 PF13335 Magnesium chelatase, subunit ChlI C-terminal D5F51_00785 PF08046 IlvGEDA operon leader peptide D5F51_00790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5F51_00790 PF00205 Thiamine pyrophosphate enzyme, central domain D5F51_00790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5F51_00800 PF01063 Amino-transferase class IV D5F51_00805 PF00920 Dehydratase family D5F51_00810 PF00291 Pyridoxal-phosphate dependent enzyme D5F51_00810 PF00585 C-terminal regulatory domain of Threonine dehydratase D5F51_00815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_00815 PF03466 LysR substrate binding domain D5F51_00820 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D5F51_00820 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D5F51_00830 PF01320 Colicin immunity protein / pyocin immunity protein D5F51_00840 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_00840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_00855 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_00855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_00870 PF13361 UvrD-like helicase C-terminal domain D5F51_00870 PF00580 UvrD/REP helicase N-terminal domain D5F51_00875 PF00295 Glycosyl hydrolases family 28 D5F51_00880 PF02541 Ppx/GppA phosphatase family D5F51_00885 PF00270 DEAD/DEAH box helicase D5F51_00885 PF00271 Helicase conserved C-terminal domain D5F51_00890 PF00085 Thioredoxin D5F51_00895 PF07497 Rho termination factor, RNA-binding domain D5F51_00895 PF07498 Rho termination factor, N-terminal domain D5F51_00895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5F51_00900 PF00953 Glycosyl transferase family 4 D5F51_00905 PF02706 Chain length determinant protein D5F51_00910 PF02350 UDP-N-acetylglucosamine 2-epimerase D5F51_00915 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D5F51_00915 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D5F51_00915 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D5F51_00920 PF16363 GDP-mannose 4,6 dehydratase D5F51_00925 PF00483 Nucleotidyl transferase D5F51_00935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D5F51_00940 PF01943 Polysaccharide biosynthesis protein D5F51_00945 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 D5F51_00950 PF06899 WzyE protein, O-antigen assembly polymerase D5F51_00955 PF03808 Glycosyl transferase WecB/TagA/CpsF family D5F51_00965 PF00324 Amino acid permease D5F51_00990 PF07719 Tetratricopeptide repeat D5F51_00990 PF07219 HemY protein N-terminus D5F51_00995 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D5F51_01000 PF02602 Uroporphyrinogen-III synthase HemD D5F51_01005 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D5F51_01005 PF03900 Porphobilinogen deaminase, C-terminal domain D5F51_01015 PF01295 Adenylate cyclase, class-I D5F51_01015 PF12633 Adenylate cyclase NT domain D5F51_01020 PF01491 Frataxin-like domain D5F51_01025 PF13627 Prokaryotic lipoprotein-attachment site D5F51_01030 PF01678 Diaminopimelate epimerase D5F51_01035 PF04340 Protein of unknown function, DUF484 D5F51_01040 PF00589 Phage integrase family D5F51_01040 PF02899 Phage integrase, N-terminal SAM-like domain D5F51_01045 PF13419 Haloacid dehalogenase-like hydrolase D5F51_01050 PF00580 UvrD/REP helicase N-terminal domain D5F51_01050 PF13361 UvrD-like helicase C-terminal domain D5F51_01070 PF09370 Phosphoenolpyruvate hydrolase-like D5F51_01080 PF01544 CorA-like Mg2+ transporter protein D5F51_01085 PF00892 EamA-like transporter family D5F51_01090 PF03061 Thioesterase superfamily D5F51_01095 PF02253 Phospholipase A1 D5F51_01100 PF16124 RecQ zinc-binding D5F51_01100 PF09382 RQC domain D5F51_01100 PF00570 HRDC domain D5F51_01100 PF00270 DEAD/DEAH box helicase D5F51_01100 PF00271 Helicase conserved C-terminal domain D5F51_01105 PF01810 LysE type translocator D5F51_01110 PF01810 LysE type translocator D5F51_01115 PF12146 Serine aminopeptidase, S33 D5F51_01125 PF03009 Glycerophosphoryl diester phosphodiesterase family D5F51_01130 PF07690 Major Facilitator Superfamily D5F51_01135 PF04324 BFD-like [2Fe-2S] binding domain D5F51_01135 PF01266 FAD dependent oxidoreductase D5F51_01140 PF00890 FAD binding domain D5F51_01145 PF13183 4Fe-4S dicluster domain D5F51_01145 PF02754 Cysteine-rich domain D5F51_01150 PF08786 DcrB D5F51_01155 PF02592 Putative vitamin uptake transporter D5F51_01160 PF01206 Sulfurtransferase TusA D5F51_01165 PF00403 Heavy-metal-associated domain D5F51_01170 PF07947 YhhN family D5F51_01185 PF06611 Protein of unknown function (DUF1145) D5F51_01195 PF02881 SRP54-type protein, helical bundle domain D5F51_01195 PF00448 SRP54-type protein, GTPase domain D5F51_01200 PF00005 ABC transporter D5F51_01205 PF02687 FtsX-like permease family D5F51_01205 PF18075 FtsX extracellular domain D5F51_01210 PF04545 Sigma-70, region 4 D5F51_01210 PF04542 Sigma-70 region 2 D5F51_01210 PF00140 Sigma-70 factor, region 1.2 D5F51_01215 PF12568 Acetyltransferase (GNAT) domain, PanZ D5F51_01220 PF13458 Periplasmic binding protein D5F51_01225 PF02653 Branched-chain amino acid transport system / permease component D5F51_01230 PF02653 Branched-chain amino acid transport system / permease component D5F51_01230 PF11862 Domain of unknown function (DUF3382) D5F51_01235 PF00005 ABC transporter D5F51_01235 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5F51_01240 PF00005 ABC transporter D5F51_01290 PF13416 Bacterial extracellular solute-binding protein D5F51_01295 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_01300 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_01305 PF17912 MalK OB fold domain D5F51_01305 PF00005 ABC transporter D5F51_01310 PF03009 Glycerophosphoryl diester phosphodiesterase family D5F51_01315 PF03547 Membrane transport protein D5F51_01320 PF00892 EamA-like transporter family D5F51_01325 PF03466 LysR substrate binding domain D5F51_01325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_01330 PF01717 Cobalamin-independent synthase, Catalytic domain D5F51_01330 PF08267 Cobalamin-independent synthase, N-terminal domain D5F51_01335 PF01738 Dienelactone hydrolase family D5F51_01340 PF01048 Phosphorylase superfamily D5F51_01350 PF02554 Carbon starvation protein CstA D5F51_01350 PF13722 5TM C-terminal transporter carbon starvation CstA D5F51_01355 PF09335 SNARE associated Golgi protein D5F51_01360 PF02646 RmuC family D5F51_01365 PF01209 ubiE/COQ5 methyltransferase family D5F51_01370 PF02036 SCP-2 sterol transfer family D5F51_01375 PF03109 ABC1 family D5F51_01380 PF02416 mttA/Hcf106 family D5F51_01390 PF00902 Sec-independent protein translocase protein (TatC) D5F51_01395 PF01026 TatD related DNase D5F51_01400 PF00490 Delta-aminolevulinic acid dehydratase D5F51_01405 PF02357 Transcription termination factor nusG D5F51_01410 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D5F51_01415 PF00175 Oxidoreductase NAD-binding domain D5F51_01415 PF00970 Oxidoreductase FAD-binding domain D5F51_01420 PF00108 Thiolase, N-terminal domain D5F51_01420 PF02803 Thiolase, C-terminal domain D5F51_01425 PF00378 Enoyl-CoA hydratase/isomerase D5F51_01425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5F51_01425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5F51_01430 PF00557 Metallopeptidase family M24 D5F51_01435 PF01205 Uncharacterized protein family UPF0029 D5F51_01435 PF09186 Domain of unknown function (DUF1949) D5F51_01440 PF02386 Cation transport protein D5F51_01445 PF12724 Flavodoxin domain D5F51_01475 PF01565 FAD binding domain D5F51_01475 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D5F51_01480 PF08279 HTH domain D5F51_01480 PF03099 Biotin/lipoate A/B protein ligase family D5F51_01480 PF02237 Biotin protein ligase C terminal domain D5F51_01485 PF00485 Phosphoribulokinase / Uridine kinase family D5F51_01490 PF13673 Acetyltransferase (GNAT) domain D5F51_01515 PF00009 Elongation factor Tu GTP binding domain D5F51_01515 PF03143 Elongation factor Tu C-terminal domain D5F51_01515 PF03144 Elongation factor Tu domain 2 D5F51_01520 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D5F51_01525 PF02357 Transcription termination factor nusG D5F51_01525 PF00467 KOW motif D5F51_01530 PF03946 Ribosomal protein L11, N-terminal domain D5F51_01530 PF00298 Ribosomal protein L11, RNA binding domain D5F51_01535 PF00687 Ribosomal protein L1p/L10e family D5F51_01540 PF00466 Ribosomal protein L10 D5F51_01545 PF00542 Ribosomal protein L7/L12 C-terminal domain D5F51_01545 PF16320 Ribosomal protein L7/L12 dimerisation domain D5F51_01550 PF10385 RNA polymerase beta subunit external 1 domain D5F51_01550 PF04561 RNA polymerase Rpb2, domain 2 D5F51_01550 PF04560 RNA polymerase Rpb2, domain 7 D5F51_01550 PF04563 RNA polymerase beta subunit D5F51_01550 PF00562 RNA polymerase Rpb2, domain 6 D5F51_01550 PF04565 RNA polymerase Rpb2, domain 3 D5F51_01555 PF00623 RNA polymerase Rpb1, domain 2 D5F51_01555 PF04983 RNA polymerase Rpb1, domain 3 D5F51_01555 PF04997 RNA polymerase Rpb1, domain 1 D5F51_01555 PF05000 RNA polymerase Rpb1, domain 4 D5F51_01555 PF04998 RNA polymerase Rpb1, domain 5 D5F51_01560 PF04055 Radical SAM superfamily D5F51_01560 PF06968 Biotin and Thiamin Synthesis associated domain D5F51_01565 PF05690 Thiazole biosynthesis protein ThiG D5F51_01570 PF02597 ThiS family D5F51_01575 PF00899 ThiF family D5F51_01580 PF02581 Thiamine monophosphate synthase D5F51_01585 PF13667 ThiC-associated domain D5F51_01585 PF01964 Radical SAM ThiC family D5F51_01590 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D5F51_01595 PF00293 NUDIX domain D5F51_01595 PF09297 NADH pyrophosphatase zinc ribbon domain D5F51_01600 PF01208 Uroporphyrinogen decarboxylase (URO-D) D5F51_01605 PF04493 Endonuclease V D5F51_01610 PF04222 Protein of unknown function (DUF416) D5F51_01615 PF00216 Bacterial DNA-binding protein D5F51_01620 PF07356 Protein of unknown function (DUF1481) D5F51_01625 PF02844 Phosphoribosylglycinamide synthetase, N domain D5F51_01625 PF02843 Phosphoribosylglycinamide synthetase, C domain D5F51_01625 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D5F51_01630 PF01808 AICARFT/IMPCHase bienzyme D5F51_01630 PF02142 MGS-like domain D5F51_01670 PF00474 Sodium:solute symporter family D5F51_01675 PF04341 Protein of unknown function, DUF485 D5F51_01680 PF13193 AMP-binding enzyme C-terminal domain D5F51_01680 PF16177 Acetyl-coenzyme A synthetase N-terminus D5F51_01680 PF00501 AMP-binding enzyme D5F51_01685 PF00375 Sodium:dicarboxylate symporter family D5F51_01690 PF00196 Bacterial regulatory proteins, luxR family D5F51_01690 PF00072 Response regulator receiver domain D5F51_01695 PF00512 His Kinase A (phospho-acceptor) domain D5F51_01695 PF00072 Response regulator receiver domain D5F51_01695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5F51_01695 PF01627 Hpt domain D5F51_01695 PF00672 HAMP domain D5F51_01695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_01725 PF03433 EspA-like secreted protein D5F51_01735 PF04888 Secretion system effector C (SseC) like family D5F51_01740 PF05802 Enterobacterial EspB protein D5F51_01760 PF14525 AraC-binding-like domain D5F51_01760 PF12833 Helix-turn-helix domain D5F51_01780 PF01514 Secretory protein of YscJ/FliF family D5F51_01795 PF07201 HrpJ-like domain D5F51_01805 PF00771 FHIPEP family D5F51_01810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5F51_01810 PF18269 T3SS EscN ATPase C-terminal domain D5F51_01825 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5F51_01830 PF00813 FliP family D5F51_01835 PF01313 Bacterial export proteins, family 3 D5F51_01840 PF01311 Bacterial export proteins, family 1 D5F51_01845 PF01312 FlhB HrpN YscU SpaS Family D5F51_01850 PF04143 Sulphur transport D5F51_01855 PF01206 Sulfurtransferase TusA D5F51_01860 PF00924 Mechanosensitive ion channel D5F51_01860 PF12794 Mechanosensitive ion channel inner membrane domain 1 D5F51_01860 PF12795 Mechanosensitive ion channel porin domain D5F51_01865 PF00593 TonB dependent receptor D5F51_01865 PF07715 TonB-dependent Receptor Plug Domain D5F51_01885 PF00392 Bacterial regulatory proteins, gntR family D5F51_01885 PF00155 Aminotransferase class I and II D5F51_01890 PF00005 ABC transporter D5F51_01895 PF01032 FecCD transport family D5F51_01900 PF01497 Periplasmic binding protein D5F51_01905 PF05171 Haemin-degrading HemS.ChuX domain D5F51_01910 PF07715 TonB-dependent Receptor Plug Domain D5F51_01910 PF00593 TonB dependent receptor D5F51_01915 PF10636 Hemin uptake protein hemP D5F51_01925 PF06228 Haem utilisation ChuX/HutX D5F51_01930 PF04055 Radical SAM superfamily D5F51_01960 PF03328 HpcH/HpaI aldolase/citrate lyase family D5F51_01965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5F51_01965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5F51_01970 PF02595 Glycerate kinase family D5F51_01975 PF05651 Putative sugar diacid recognition D5F51_01975 PF13556 PucR C-terminal helix-turn-helix domain D5F51_01975 PF17853 GGDEF-like domain D5F51_01980 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5F51_01980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D5F51_01980 PF13247 4Fe-4S dicluster domain D5F51_01985 PF13247 4Fe-4S dicluster domain D5F51_01985 PF12800 4Fe-4S binding domain D5F51_01990 PF00384 Molybdopterin oxidoreductase D5F51_01990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5F51_01990 PF01568 Molydopterin dinucleotide binding domain D5F51_01995 PF11412 Disulphide bond corrector protein DsbC D5F51_01995 PF02683 Cytochrome C biogenesis protein transmembrane region D5F51_02000 PF03091 CutA1 divalent ion tolerance protein D5F51_02005 PF03605 Anaerobic c4-dicarboxylate membrane transporter D5F51_02010 PF10415 Fumarase C C-terminus D5F51_02010 PF00206 Lyase D5F51_02015 PF04186 FxsA cytoplasmic membrane protein D5F51_02020 PF00166 Chaperonin 10 Kd subunit D5F51_02025 PF00118 TCP-1/cpn60 chaperonin family D5F51_02035 PF13698 Domain of unknown function (DUF4156) D5F51_02040 PF04055 Radical SAM superfamily D5F51_02045 PF09285 Elongation factor P, C-terminal D5F51_02045 PF08207 Elongation factor P (EF-P) KOW-like domain D5F51_02045 PF01132 Elongation factor P (EF-P) OB domain D5F51_02050 PF00893 Small Multidrug Resistance protein D5F51_02055 PF08212 Lipocalin-like domain D5F51_02060 PF02313 Fumarate reductase subunit D D5F51_02065 PF02300 Fumarate reductase subunit C D5F51_02070 PF13085 2Fe-2S iron-sulfur cluster binding domain D5F51_02070 PF13183 4Fe-4S dicluster domain D5F51_02075 PF02910 Fumarate reductase flavoprotein C-term D5F51_02075 PF00890 FAD binding domain D5F51_02080 PF00152 tRNA synthetases class II (D, K and N) D5F51_02085 PF00924 Mechanosensitive ion channel D5F51_02085 PF12795 Mechanosensitive ion channel porin domain D5F51_02085 PF12794 Mechanosensitive ion channel inner membrane domain 1 D5F51_02090 PF02666 Phosphatidylserine decarboxylase D5F51_02095 PF03193 RsgA GTPase D5F51_02100 PF00929 Exonuclease D5F51_02125 PF08331 Domain of unknown function (DUF1730) D5F51_02130 PF01256 Carbohydrate kinase D5F51_02130 PF03853 YjeF-related protein N-terminus D5F51_02135 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D5F51_02140 PF01520 N-acetylmuramoyl-L-alanine amidase D5F51_02145 PF08676 MutL C terminal dimerisation domain D5F51_02145 PF01119 DNA mismatch repair protein, C-terminal domain D5F51_02155 PF17209 Hfq protein D5F51_02160 PF13167 GTP-binding GTPase N-terminal D5F51_02160 PF16360 GTP-binding GTPase Middle Region D5F51_02160 PF01926 50S ribosome-binding GTPase D5F51_02165 PF01145 SPFH domain / Band 7 family D5F51_02165 PF12221 Bacterial membrane protein N terminal D5F51_02170 PF01145 SPFH domain / Band 7 family D5F51_02180 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) D5F51_02185 PF00709 Adenylosuccinate synthetase D5F51_02190 PF02082 Transcriptional regulator D5F51_02195 PF17876 Cold shock domain D5F51_02195 PF00575 S1 RNA binding domain D5F51_02195 PF08461 Ribonuclease R winged-helix domain D5F51_02195 PF08206 Ribonuclease B OB domain D5F51_02195 PF00773 RNB domain D5F51_02200 PF00588 SpoU rRNA Methylase family D5F51_02200 PF08032 RNA 2'-O ribose methyltransferase substrate binding D5F51_02205 PF02770 Acyl-CoA dehydrogenase, middle domain D5F51_02205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5F51_02205 PF18158 Adaptive response protein AidB N-terminal domain D5F51_02210 PF07338 Protein of unknown function (DUF1471) D5F51_02215 PF00326 Prolyl oligopeptidase family D5F51_02230 PF01250 Ribosomal protein S6 D5F51_02235 PF00436 Single-strand binding protein family D5F51_02240 PF01084 Ribosomal protein S18 D5F51_02245 PF03948 Ribosomal protein L9, C-terminal domain D5F51_02245 PF01281 Ribosomal protein L9, N-terminal domain D5F51_02255 PF08525 Opacity-associated protein A N-terminal motif D5F51_02255 PF04225 Opacity-associated protein A LysM-like domain D5F51_02260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5F51_02260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D5F51_02265 PF01814 Hemerythrin HHE cation binding domain D5F51_02265 PF04405 Domain of Unknown function (DUF542) D5F51_02270 PF02872 5'-nucleotidase, C-terminal domain D5F51_02270 PF00149 Calcineurin-like phosphoesterase D5F51_02275 PF00459 Inositol monophosphatase family D5F51_02280 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D5F51_02285 PF06526 Protein of unknown function (DUF1107) D5F51_02290 PF00571 CBS domain D5F51_02290 PF03471 Transporter associated domain D5F51_02290 PF01595 Cyclin M transmembrane N-terminal domain D5F51_02295 PF01625 Peptide methionine sulfoxide reductase D5F51_02300 PF07244 Surface antigen variable number repeat D5F51_02300 PF01103 Surface antigen D5F51_02300 PF17243 POTRA domain TamA domain 1 D5F51_02305 PF04357 TamB, inner membrane protein subunit of TAM complex D5F51_02310 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D5F51_02315 PF00719 Inorganic pyrophosphatase D5F51_02320 PF02203 Tar ligand binding domain homologue D5F51_02320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_02320 PF00672 HAMP domain D5F51_02325 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D5F51_02330 PF01225 Mur ligase family, catalytic domain D5F51_02330 PF02875 Mur ligase family, glutamate ligase domain D5F51_02330 PF08245 Mur ligase middle domain D5F51_02340 PF01316 Arginine repressor, DNA binding domain D5F51_02340 PF02863 Arginine repressor, C-terminal domain D5F51_02345 PF00056 lactate/malate dehydrogenase, NAD binding domain D5F51_02345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D5F51_02350 PF13693 Winged helix-turn-helix DNA-binding D5F51_02360 PF00348 Polyprenyl synthetase D5F51_02365 PF00829 Ribosomal prokaryotic L21 protein D5F51_02370 PF01016 Ribosomal L27 protein D5F51_02375 PF00892 EamA-like transporter family D5F51_02380 PF01018 GTP1/OBG D5F51_02380 PF01926 50S ribosome-binding GTPase D5F51_02385 PF00672 HAMP domain D5F51_02385 PF00512 His Kinase A (phospho-acceptor) domain D5F51_02385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_02390 PF00072 Response regulator receiver domain D5F51_02390 PF00486 Transcriptional regulatory protein, C terminal D5F51_02395 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D5F51_02400 PF01272 Transcription elongation factor, GreA/GreB, C-term D5F51_02400 PF03449 Transcription elongation factor, N-terminal D5F51_02405 PF01985 CRS1 / YhbY (CRM) domain D5F51_02410 PF01728 FtsJ-like methyltransferase D5F51_02415 PF01434 Peptidase family M41 D5F51_02415 PF17862 AAA+ lid domain D5F51_02415 PF00004 ATPase family associated with various cellular activities (AAA) D5F51_02415 PF06480 FtsH Extracellular D5F51_02420 PF00809 Pterin binding enzyme D5F51_02425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5F51_02425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5F51_02425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5F51_02425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5F51_02430 PF03840 Preprotein translocase SecG subunit D5F51_02445 PF02576 RimP N-terminal domain D5F51_02445 PF17384 RimP C-terminal SH3 domain D5F51_02450 PF13184 NusA-like KH domain D5F51_02450 PF08529 NusA N-terminal domain D5F51_02450 PF00575 S1 RNA binding domain D5F51_02455 PF00009 Elongation factor Tu GTP binding domain D5F51_02455 PF08364 Bacterial translation initiation factor IF-2 associated region D5F51_02455 PF04760 Translation initiation factor IF-2, N-terminal region D5F51_02455 PF11987 Translation-initiation factor 2 D5F51_02455 PF03144 Elongation factor Tu domain 2 D5F51_02460 PF02033 Ribosome-binding factor A D5F51_02465 PF09157 Pseudouridine synthase II TruB, C-terminal D5F51_02465 PF16198 tRNA pseudouridylate synthase B C-terminal domain D5F51_02465 PF01509 TruB family pseudouridylate synthase (N terminal domain) D5F51_02470 PF00312 Ribosomal protein S15 D5F51_02475 PF00013 KH domain D5F51_02475 PF01138 3' exoribonuclease family, domain 1 D5F51_02475 PF03725 3' exoribonuclease family, domain 2 D5F51_02475 PF00575 S1 RNA binding domain D5F51_02475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D5F51_02480 PF13181 Tetratricopeptide repeat D5F51_02480 PF07719 Tetratricopeptide repeat D5F51_02490 PF12343 Cold shock protein DEAD box A D5F51_02490 PF00270 DEAD/DEAH box helicase D5F51_02490 PF03880 DbpA RNA binding domain D5F51_02490 PF00271 Helicase conserved C-terminal domain D5F51_02495 PF00296 Luciferase-like monooxygenase D5F51_02530 PF13508 Acetyltransferase (GNAT) domain D5F51_02535 PF01541 GIY-YIG catalytic domain D5F51_02540 PF13520 Amino acid permease D5F51_02545 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D5F51_02545 PF01276 Orn/Lys/Arg decarboxylase, major domain D5F51_02545 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D5F51_02560 PF07940 Heparinase II/III-like protein D5F51_02560 PF05426 Alginate lyase D5F51_02570 PF01547 Bacterial extracellular solute-binding protein D5F51_02580 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_02585 PF03459 TOBE domain D5F51_02585 PF00005 ABC transporter D5F51_02585 PF17912 MalK OB fold domain D5F51_02600 PF13460 NAD(P)H-binding D5F51_02605 PF12706 Beta-lactamase superfamily domain D5F51_02615 PF07969 Amidohydrolase family D5F51_02620 PF00005 ABC transporter D5F51_02625 PF00005 ABC transporter D5F51_02630 PF06007 Phosphonate metabolism protein PhnJ D5F51_02635 PF05861 Bacterial phosphonate metabolism protein (PhnI) D5F51_02645 PF06754 Phosphonate metabolism protein PhnG D5F51_02650 PF00392 Bacterial regulatory proteins, gntR family D5F51_02650 PF07702 UTRA domain D5F51_02670 PF03477 ATP cone domain D5F51_02670 PF13597 Anaerobic ribonucleoside-triphosphate reductase D5F51_02675 PF03466 LysR substrate binding domain D5F51_02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_02680 PF02525 Flavodoxin-like fold D5F51_02685 PF00005 ABC transporter D5F51_02685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5F51_02690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5F51_02690 PF00005 ABC transporter D5F51_02700 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_02705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_02710 PF04074 YhcH/YjgK/YiaL D5F51_02715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D5F51_02715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D5F51_02720 PF06877 Regulator of ribonuclease activity B D5F51_02730 PF00583 Acetyltransferase (GNAT) family D5F51_02735 PF10458 Valyl tRNA synthetase tRNA binding arm D5F51_02735 PF00133 tRNA synthetases class I (I, L, M and V) D5F51_02735 PF08264 Anticodon-binding domain of tRNA D5F51_02740 PF04364 DNA polymerase III chi subunit, HolC D5F51_02745 PF00883 Cytosol aminopeptidase family, catalytic domain D5F51_02745 PF02789 Cytosol aminopeptidase family, N-terminal domain D5F51_02750 PF03739 Lipopolysaccharide export system permease LptF/LptG D5F51_02755 PF03739 Lipopolysaccharide export system permease LptF/LptG D5F51_02765 PF00589 Phage integrase family D5F51_02765 PF13356 Arm DNA-binding domain D5F51_02775 PF00872 Transposase, Mutator family D5F51_02805 PF18337 RapA N-terminal Tudor like domain D5F51_02805 PF18339 RapA N-terminal Tudor like domain 1 D5F51_02805 PF00176 SNF2 family N-terminal domain D5F51_02805 PF12137 RNA polymerase recycling family C-terminal D5F51_02805 PF00271 Helicase conserved C-terminal domain D5F51_02810 PF00145 C-5 cytosine-specific DNA methylase D5F51_02865 PF01926 50S ribosome-binding GTPase D5F51_02875 PF13280 WYL domain D5F51_02875 PF08220 DeoR-like helix-turn-helix domain D5F51_02895 PF06006 Bacterial protein of unknown function (DUF905) D5F51_02900 PF03230 Antirestriction protein D5F51_02905 PF04002 RadC-like JAB domain D5F51_02910 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A D5F51_02915 PF06755 CbtA_toxin of type IV toxin-antitoxin system D5F51_02930 PF00583 Acetyltransferase (GNAT) family D5F51_02945 PF10696 Protein of unknown function (DUF2501) D5F51_02955 PF08349 Protein of unknown function (DUF1722) D5F51_02960 PF03992 Antibiotic biosynthesis monooxygenase D5F51_02965 PF01791 DeoC/LacD family aldolase D5F51_02970 PF13407 Periplasmic binding protein domain D5F51_02975 PF02653 Branched-chain amino acid transport system / permease component D5F51_02980 PF02653 Branched-chain amino acid transport system / permease component D5F51_02985 PF00005 ABC transporter D5F51_02995 PF04198 Putative sugar-binding domain D5F51_02995 PF00325 Bacterial regulatory proteins, crp family D5F51_03000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5F51_03000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5F51_03005 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5F51_03015 PF13520 Amino acid permease D5F51_03030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5F51_03035 PF00873 AcrB/AcrD/AcrF family D5F51_03040 PF00465 Iron-containing alcohol dehydrogenase D5F51_03045 PF02733 Dak1 domain D5F51_03050 PF02734 DAK2 domain D5F51_03055 PF00391 PEP-utilising enzyme, mobile domain D5F51_03055 PF05524 PEP-utilising enzyme, N-terminal D5F51_03055 PF00381 PTS HPr component phosphorylation site D5F51_03055 PF03610 PTS system fructose IIA component D5F51_03065 PF16861 Carbamoyltransferase C-terminus D5F51_03065 PF02543 Carbamoyltransferase N-terminus D5F51_03090 PF01095 Pectinesterase D5F51_03095 PF00989 PAS fold D5F51_03095 PF02954 Bacterial regulatory protein, Fis family D5F51_03095 PF00158 Sigma-54 interaction domain D5F51_03100 PF13407 Periplasmic binding protein domain D5F51_03100 PF00356 Bacterial regulatory proteins, lacI family D5F51_03115 PF00990 Diguanylate cyclase, GGDEF domain D5F51_03120 PF07256 Protein of unknown function (DUF1435) D5F51_03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_03140 PF03466 LysR substrate binding domain D5F51_03145 PF00248 Aldo/keto reductase family D5F51_03150 PF05175 Methyltransferase small domain D5F51_03150 PF08468 Methyltransferase small domain N-terminal D5F51_03155 PF03603 DNA polymerase III psi subunit D5F51_03160 PF00583 Acetyltransferase (GNAT) family D5F51_03165 PF16658 Class II release factor RF3, C-terminal domain D5F51_03165 PF03144 Elongation factor Tu domain 2 D5F51_03165 PF00009 Elongation factor Tu GTP binding domain D5F51_03170 PF04972 BON domain D5F51_03175 PF07043 Protein of unknown function (DUF1328) D5F51_03180 PF01734 Patatin-like phospholipase D5F51_03185 PF01026 TatD related DNase D5F51_03190 PF07662 Na+ dependent nucleoside transporter C-terminus D5F51_03190 PF01773 Na+ dependent nucleoside transporter N-terminus D5F51_03190 PF07670 Nucleoside recognition D5F51_03200 PF01791 DeoC/LacD family aldolase D5F51_03205 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D5F51_03205 PF02885 Glycosyl transferase family, helical bundle domain D5F51_03205 PF00591 Glycosyl transferase family, a/b domain D5F51_03210 PF01676 Metalloenzyme superfamily D5F51_03215 PF01048 Phosphorylase superfamily D5F51_03220 PF10144 Bacterial virulence factor haemolysin D5F51_03225 PF18429 Domain of unknown function (DUF5609) D5F51_03230 PF18073 Rubredoxin metal binding domain D5F51_03235 PF01381 Helix-turn-helix D5F51_03235 PF13521 AAA domain D5F51_03240 PF08240 Alcohol dehydrogenase GroES-like domain D5F51_03240 PF00107 Zinc-binding dehydrogenase D5F51_03245 PF03466 LysR substrate binding domain D5F51_03245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_03250 PF00005 ABC transporter D5F51_03250 PF12848 ABC transporter D5F51_03255 PF12167 Arm DNA-binding domain D5F51_03255 PF00589 Phage integrase family D5F51_03305 PF10065 Uncharacterized conserved protein (DUF2303) D5F51_03325 PF01381 Helix-turn-helix D5F51_03325 PF00717 Peptidase S24-like D5F51_03345 PF03354 Phage Terminase D5F51_03365 PF06147 Protein of unknown function (DUF968) D5F51_03370 PF06530 Phage antitermination protein Q D5F51_03390 PF18755 Restriction Enzyme Adenine Methylase Associated D5F51_03390 PF01555 DNA methylase D5F51_03400 PF00182 Chitinase class I D5F51_03440 PF00574 Clp protease D5F51_03530 PF00691 OmpA family D5F51_03535 PF00990 Diguanylate cyclase, GGDEF domain D5F51_03535 PF17152 Periplasmic sensor domain D5F51_03545 PF00689 Cation transporting ATPase, C-terminus D5F51_03545 PF00690 Cation transporter/ATPase, N-terminus D5F51_03550 PF14718 Soluble lytic murein transglycosylase L domain D5F51_03550 PF01464 Transglycosylase SLT domain D5F51_03555 PF01371 Trp repressor protein D5F51_03560 PF01931 Protein of unknown function DUF84 D5F51_03565 PF00300 Histidine phosphatase superfamily (branch 1) D5F51_03570 PF12833 Helix-turn-helix domain D5F51_03570 PF06445 GyrI-like small molecule binding domain D5F51_03575 PF05981 CreA protein D5F51_03580 PF00072 Response regulator receiver domain D5F51_03580 PF00486 Transcriptional regulatory protein, C terminal D5F51_03585 PF08254 Threonine leader peptide D5F51_03590 PF13840 ACT domain D5F51_03590 PF03447 Homoserine dehydrogenase, NAD binding domain D5F51_03590 PF00696 Amino acid kinase family D5F51_03590 PF00742 Homoserine dehydrogenase D5F51_03590 PF01842 ACT domain D5F51_03595 PF08544 GHMP kinases C terminal D5F51_03595 PF00288 GHMP kinases N terminal domain D5F51_03600 PF00291 Pyridoxal-phosphate dependent enzyme D5F51_03600 PF14821 Threonine synthase N terminus D5F51_03605 PF03883 Peroxide stress protein YaaA D5F51_03615 PF00923 Transaldolase/Fructose-6-phosphate aldolase D5F51_03620 PF00994 Probable molybdopterin binding domain D5F51_03625 PF07690 Major Facilitator Superfamily D5F51_03635 PF01184 GPR1/FUN34/yaaH family D5F51_03640 PF00012 Hsp70 protein D5F51_03645 PF01556 DnaJ C terminal domain D5F51_03645 PF00684 DnaJ central domain D5F51_03645 PF00226 DnaJ domain D5F51_03650 PF06965 Na+/H+ antiporter 1 D5F51_03655 PF03466 LysR substrate binding domain D5F51_03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_03660 PF01649 Ribosomal protein S20 D5F51_03675 PF06574 FAD synthetase D5F51_03675 PF01687 Riboflavin kinase D5F51_03680 PF06827 Zinc finger found in FPG and IleRS D5F51_03680 PF00133 tRNA synthetases class I (I, L, M and V) D5F51_03680 PF08264 Anticodon-binding domain of tRNA D5F51_03685 PF01252 Signal peptidase (SPase) II D5F51_03690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5F51_03695 PF02401 LytB protein D5F51_03700 PF01113 Dihydrodipicolinate reductase, N-terminus D5F51_03700 PF05173 Dihydrodipicolinate reductase, C-terminus D5F51_03705 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D5F51_03705 PF00117 Glutamine amidotransferase class-I D5F51_03710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5F51_03710 PF02142 MGS-like domain D5F51_03710 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D5F51_03715 PF01810 LysE type translocator D5F51_03720 PF06738 Putative threonine/serine exporter D5F51_03725 PF12821 Threonine/Serine exporter, ThrE D5F51_03730 PF00186 Dihydrofolate reductase D5F51_03735 PF00149 Calcineurin-like phosphoesterase D5F51_03740 PF04379 ApaG domain D5F51_03745 PF00398 Ribosomal RNA adenine dimethylase D5F51_03750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D5F51_03755 PF00639 PPIC-type PPIASE domain D5F51_03755 PF09312 SurA N-terminal domain D5F51_03760 PF04453 LPS transport system D D5F51_03760 PF03968 OstA-like protein D5F51_03765 PF00226 DnaJ domain D5F51_03765 PF05099 Tellurite resistance protein TerB D5F51_03775 PF00849 RNA pseudouridylate synthase D5F51_03780 PF00176 SNF2 family N-terminal domain D5F51_03780 PF18337 RapA N-terminal Tudor like domain D5F51_03780 PF00271 Helicase conserved C-terminal domain D5F51_03780 PF18339 RapA N-terminal Tudor like domain 1 D5F51_03780 PF12137 RNA polymerase recycling family C-terminal D5F51_03785 PF00136 DNA polymerase family B D5F51_03785 PF03104 DNA polymerase family B, exonuclease domain D5F51_03790 PF09335 SNARE associated Golgi protein D5F51_03795 PF00005 ABC transporter D5F51_03800 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_03810 PF12793 Sugar transport-related sRNA regulator N-term D5F51_03810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_03815 PF04055 Radical SAM superfamily D5F51_03825 PF07690 Major Facilitator Superfamily D5F51_03830 PF03222 Tryptophan/tyrosine permease family D5F51_03835 PF01212 Beta-eliminating lyase D5F51_03845 PF00694 Aconitase C-terminal domain D5F51_03850 PF00330 Aconitase family (aconitate hydratase) D5F51_03855 PF00180 Isocitrate/isopropylmalate dehydrogenase D5F51_03860 PF08502 LeuA allosteric (dimerisation) domain D5F51_03860 PF00682 HMGL-like D5F51_03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_03875 PF03466 LysR substrate binding domain D5F51_03880 PF00501 AMP-binding enzyme D5F51_03885 PF00205 Thiamine pyrophosphate enzyme, central domain D5F51_03885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5F51_03885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5F51_03890 PF10369 Small subunit of acetolactate synthase D5F51_03895 PF00356 Bacterial regulatory proteins, lacI family D5F51_03895 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D5F51_03900 PF06610 L-alanine exporter D5F51_03905 PF02381 MraZ protein, putative antitoxin-like D5F51_03910 PF01795 MraW methylase family D5F51_03915 PF04999 Cell division protein FtsL D5F51_03920 PF00905 Penicillin binding protein transpeptidase domain D5F51_03920 PF03717 Penicillin-binding Protein dimerisation domain D5F51_03925 PF08245 Mur ligase middle domain D5F51_03925 PF02875 Mur ligase family, glutamate ligase domain D5F51_03925 PF01225 Mur ligase family, catalytic domain D5F51_03930 PF08245 Mur ligase middle domain D5F51_03930 PF01225 Mur ligase family, catalytic domain D5F51_03930 PF02875 Mur ligase family, glutamate ligase domain D5F51_03935 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D5F51_03935 PF00953 Glycosyl transferase family 4 D5F51_03940 PF02875 Mur ligase family, glutamate ligase domain D5F51_03940 PF08245 Mur ligase middle domain D5F51_03945 PF01098 Cell cycle protein D5F51_03950 PF03033 Glycosyltransferase family 28 N-terminal domain D5F51_03950 PF04101 Glycosyltransferase family 28 C-terminal domain D5F51_03955 PF08245 Mur ligase middle domain D5F51_03955 PF02875 Mur ligase family, glutamate ligase domain D5F51_03955 PF01225 Mur ligase family, catalytic domain D5F51_03960 PF07478 D-ala D-ala ligase C-terminus D5F51_03960 PF01820 D-ala D-ala ligase N-terminus D5F51_03965 PF03799 Cell division protein FtsQ D5F51_03965 PF08478 POTRA domain, FtsQ-type D5F51_03970 PF02491 SHS2 domain inserted in FTSA D5F51_03975 PF12327 FtsZ family, C-terminal domain D5F51_03975 PF00091 Tubulin/FtsZ family, GTPase domain D5F51_03980 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D5F51_03990 PF06558 Secretion monitor precursor protein (SecM) D5F51_03995 PF02810 SEC-C motif D5F51_03995 PF07517 SecA DEAD-like domain D5F51_03995 PF07516 SecA Wing and Scaffold domain D5F51_03995 PF01043 SecA preprotein cross-linking domain D5F51_04000 PF00293 NUDIX domain D5F51_04005 PF03884 DNA gyrase inhibitor YacG D5F51_04010 PF07072 Cell division protein D5F51_04015 PF01121 Dephospho-CoA kinase D5F51_04025 PF00478 IMP dehydrogenase / GMP reductase domain D5F51_04035 PF00872 Transposase, Mutator family D5F51_04045 PF00437 Type II/IV secretion system protein D5F51_04045 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D5F51_04050 PF07963 Prokaryotic N-terminal methylation motif D5F51_04055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D5F51_04055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D5F51_04060 PF01510 N-acetylmuramoyl-L-alanine amidase D5F51_04065 PF17113 Regulatory signalling modulator protein AmpE D5F51_04135 PF04984 Phage tail sheath protein subtilisin-like domain D5F51_04135 PF17482 Phage tail sheath C-terminal domain D5F51_04160 PF10124 Mu-like prophage major head subunit gpT D5F51_04190 PF06074 Protein of unknown function (DUF935) D5F51_04230 PF00182 Chitinase class I D5F51_04245 PF06252 Protein of unknown function (DUF1018) D5F51_04325 PF13693 Winged helix-turn-helix DNA-binding D5F51_04340 PF00872 Transposase, Mutator family D5F51_04345 PF00324 Amino acid permease D5F51_04350 PF07729 FCD domain D5F51_04350 PF00392 Bacterial regulatory proteins, gntR family D5F51_04360 PF00456 Transketolase, thiamine diphosphate binding domain D5F51_04360 PF17831 Pyruvate dehydrogenase E1 component middle domain D5F51_04365 PF02817 e3 binding domain D5F51_04365 PF00364 Biotin-requiring enzyme D5F51_04365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D5F51_04370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5F51_04370 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5F51_04385 PF00593 TonB dependent receptor D5F51_04385 PF07715 TonB-dependent Receptor Plug Domain D5F51_04390 PF06434 Aconitate hydratase 2 N-terminus D5F51_04390 PF11791 Aconitate B N-terminal domain D5F51_04390 PF00330 Aconitase family (aconitate hydratase) D5F51_04395 PF06062 Uncharacterised protein family (UPF0231) D5F51_04400 PF00892 EamA-like transporter family D5F51_04405 PF02675 S-adenosylmethionine decarboxylase D5F51_04410 PF17284 Spermidine synthase tetramerisation domain D5F51_04415 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) D5F51_04420 PF10518 TAT (twin-arginine translocation) pathway signal sequence D5F51_04420 PF07731 Multicopper oxidase D5F51_04420 PF07732 Multicopper oxidase D5F51_04420 PF00394 Multicopper oxidase D5F51_04425 PF00156 Phosphoribosyl transferase domain D5F51_04430 PF00484 Carbonic anhydrase D5F51_04435 PF00005 ABC transporter D5F51_04440 PF01061 ABC-2 type transporter D5F51_04445 PF01522 Polysaccharide deacetylase D5F51_04450 PF02261 Aspartate decarboxylase D5F51_04455 PF02569 Pantoate-beta-alanine ligase D5F51_04460 PF02548 Ketopantoate hydroxymethyltransferase D5F51_04465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D5F51_04470 PF01743 Poly A polymerase head domain D5F51_04470 PF12626 Polymerase A arginine-rich C-terminus D5F51_04470 PF12627 Probable RNA and SrmB- binding site of polymerase A D5F51_04475 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5F51_04480 PF01258 Prokaryotic dksA/traR C4-type zinc finger D5F51_04490 PF17746 SfsA N-terminal OB domain D5F51_04490 PF03749 Sugar fermentation stimulation protein RE domain D5F51_04495 PF02834 LigT like Phosphoesterase D5F51_04500 PF04408 Helicase associated domain (HA2) D5F51_04500 PF00270 DEAD/DEAH box helicase D5F51_04500 PF08482 ATP-dependent helicase C-terminal D5F51_04500 PF00271 Helicase conserved C-terminal domain D5F51_04505 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal D5F51_04505 PF00912 Transglycosylase D5F51_04505 PF00905 Penicillin binding protein transpeptidase domain D5F51_04505 PF14814 Bifunctional transglycosylase second domain D5F51_04510 PF00005 ABC transporter D5F51_04515 PF01497 Periplasmic binding protein D5F51_04520 PF01032 FecCD transport family D5F51_04525 PF00202 Aminotransferase class-III D5F51_04530 PF00654 Voltage gated chloride channel D5F51_04535 PF01521 Iron-sulphur cluster biosynthesis D5F51_04545 PF03458 UPF0126 domain D5F51_04550 PF01497 Periplasmic binding protein D5F51_04555 PF01048 Phosphorylase superfamily D5F51_04560 PF01966 HD domain D5F51_04560 PF13286 Phosphohydrolase-associated domain D5F51_04565 PF00595 PDZ domain D5F51_04570 PF00072 Response regulator receiver domain D5F51_04570 PF01627 Hpt domain D5F51_04570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5F51_04570 PF00672 HAMP domain D5F51_04570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_04570 PF00512 His Kinase A (phospho-acceptor) domain D5F51_04575 PF01938 TRAM domain D5F51_04575 PF05958 tRNA (Uracil-5-)-methyltransferase D5F51_04580 PF02824 TGS domain D5F51_04580 PF13291 ACT domain D5F51_04580 PF04607 Region found in RelA / SpoT proteins D5F51_04585 PF03819 MazG nucleotide pyrophosphohydrolase domain D5F51_04590 PF06418 CTP synthase N-terminus D5F51_04590 PF00117 Glutamine amidotransferase class-I D5F51_04595 PF03952 Enolase, N-terminal domain D5F51_04595 PF00113 Enolase, C-terminal TIM barrel domain D5F51_04600 PF00080 Copper/zinc superoxide dismutase (SODC) D5F51_04605 PF04055 Radical SAM superfamily D5F51_04610 PF01242 6-pyruvoyl tetrahydropterin synthase D5F51_04615 PF00258 Flavodoxin D5F51_04615 PF00667 FAD binding domain D5F51_04615 PF00175 Oxidoreductase NAD-binding domain D5F51_04620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D5F51_04620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D5F51_04625 PF01507 Phosphoadenosine phosphosulfate reductase family D5F51_04630 PF04389 Peptidase family M28 D5F51_04635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5F51_04635 PF14824 Sirohaem biosynthesis protein central D5F51_04635 PF10414 Sirohaem synthase dimerisation region D5F51_04640 PF01507 Phosphoadenosine phosphosulfate reductase family D5F51_04645 PF00009 Elongation factor Tu GTP binding domain D5F51_04655 PF12084 Protein of unknown function (DUF3561) D5F51_04660 PF00005 ABC transporter D5F51_04665 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_04670 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_04675 PF04977 Septum formation initiator D5F51_04680 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D5F51_04685 PF02542 YgbB family D5F51_04690 PF01142 tRNA pseudouridine synthase D (TruD) D5F51_04695 PF01975 Survival protein SurE D5F51_04705 PF01551 Peptidase family M23 D5F51_04705 PF01476 LysM domain D5F51_04710 PF04539 Sigma-70 region 3 D5F51_04710 PF04545 Sigma-70, region 4 D5F51_04710 PF00140 Sigma-70 factor, region 1.2 D5F51_04710 PF04542 Sigma-70 region 2 D5F51_04715 PF05190 MutS family domain IV D5F51_04715 PF05192 MutS domain III D5F51_04715 PF05188 MutS domain II D5F51_04715 PF00488 MutS domain V D5F51_04715 PF01624 MutS domain I D5F51_04730 PF00484 Carbonic anhydrase D5F51_04735 PF03616 Sodium/glutamate symporter D5F51_04760 PF13018 Extended Signal Peptide of Type V secretion system D5F51_04760 PF13332 Hemagglutinin repeat D5F51_04760 PF05860 haemagglutination activity domain D5F51_04760 PF04829 Pre-toxin domain with VENN motif D5F51_04795 PF08479 POTRA domain, ShlB-type D5F51_04795 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D5F51_04795 PF17287 POTRA domain D5F51_04805 PF13350 Tyrosine phosphatase family D5F51_04810 PF00872 Transposase, Mutator family D5F51_04815 PF00589 Phage integrase family D5F51_04815 PF13356 Arm DNA-binding domain D5F51_04830 PF00005 ABC transporter D5F51_04835 PF03379 CcmB protein D5F51_04840 PF01578 Cytochrome C assembly protein D5F51_04845 PF04995 Heme exporter protein D (CcmD) D5F51_04850 PF03100 CcmE D5F51_04855 PF01578 Cytochrome C assembly protein D5F51_04855 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D5F51_04860 PF08534 Redoxin D5F51_04865 PF03918 Cytochrome C biogenesis protein D5F51_04870 PF03918 Cytochrome C biogenesis protein D5F51_04875 PF04333 MlaA lipoprotein D5F51_04880 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D5F51_04885 PF04175 Protein of unknown function (DUF406) D5F51_04890 PF02803 Thiolase, C-terminal domain D5F51_04890 PF00108 Thiolase, N-terminal domain D5F51_04895 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5F51_04895 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5F51_04895 PF00378 Enoyl-CoA hydratase/isomerase D5F51_04900 PF00300 Histidine phosphatase superfamily (branch 1) D5F51_04905 PF01713 Smr domain D5F51_04910 PF05175 Methyltransferase small domain D5F51_04915 PF01264 Chorismate synthase D5F51_04920 PF03411 Penicillin-insensitive murein endopeptidase D5F51_04925 PF01925 Sulfite exporter TauE/SafE D5F51_04930 PF04315 Elongation factor P hydroxylase D5F51_04935 PF08891 YfcL protein D5F51_04940 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D5F51_04940 PF01266 FAD dependent oxidoreductase D5F51_04945 PF02801 Beta-ketoacyl synthase, C-terminal domain D5F51_04945 PF00109 Beta-ketoacyl synthase, N-terminal domain D5F51_04950 PF00990 Diguanylate cyclase, GGDEF domain D5F51_04950 PF17151 Periplasmic sensor domain D5F51_04955 PF01177 Asp/Glu/Hydantoin racemase D5F51_04965 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D5F51_04970 PF00232 Glycosyl hydrolase family 1 D5F51_04975 PF02378 Phosphotransferase system, EIIC D5F51_04980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D5F51_04985 PF00356 Bacterial regulatory proteins, lacI family D5F51_04990 PF00328 Histidine phosphatase superfamily (branch 2) D5F51_04995 PF03600 Citrate transporter D5F51_05010 PF02683 Cytochrome C biogenesis protein transmembrane region D5F51_05010 PF11412 Disulphide bond corrector protein DsbC D5F51_05020 PF00578 AhpC/TSA family D5F51_05025 PF00155 Aminotransferase class I and II D5F51_05035 PF00892 EamA-like transporter family D5F51_05045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5F51_05045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5F51_05045 PF11890 Domain of unknown function (DUF3410) D5F51_05050 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5F51_05050 PF02774 Semialdehyde dehydrogenase, dimerisation domain D5F51_05055 PF01416 tRNA pseudouridine synthase D5F51_05060 PF09335 SNARE associated Golgi protein D5F51_05065 PF17848 Acetyl-coA carboxylase zinc finger domain D5F51_05065 PF01039 Carboxyl transferase domain D5F51_05070 PF02875 Mur ligase family, glutamate ligase domain D5F51_05070 PF08245 Mur ligase middle domain D5F51_05075 PF05036 Sporulation related domain D5F51_05080 PF02674 Colicin V production protein D5F51_05085 PF00156 Phosphoribosyl transferase domain D5F51_05090 PF02441 Flavoprotein D5F51_05100 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_05105 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_05110 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_05115 PF00005 ABC transporter D5F51_05120 PF01370 NAD dependent epimerase/dehydratase family D5F51_05120 PF08338 Domain of unknown function (DUF1731) D5F51_05130 PF12850 Calcineurin-like phosphoesterase superfamily domain D5F51_05135 PF00293 NUDIX domain D5F51_05140 PF03611 PTS system sugar-specific permease component D5F51_05150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D5F51_05155 PF00356 Bacterial regulatory proteins, lacI family D5F51_05155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D5F51_05160 PF07085 DRTGG domain D5F51_05160 PF01515 Phosphate acetyl/butaryl transferase D5F51_05165 PF00871 Acetokinase family D5F51_05170 PF04217 Protein of unknown function, DUF412 D5F51_05175 PF03887 YfbU domain D5F51_05180 PF13419 Haloacid dehalogenase-like hydrolase D5F51_05190 PF03600 Citrate transporter D5F51_05190 PF02080 TrkA-C domain D5F51_05205 PF00155 Aminotransferase class I and II D5F51_05210 PF03466 LysR substrate binding domain D5F51_05210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_05215 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D5F51_05220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D5F51_05225 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D5F51_05225 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D5F51_05235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5F51_05235 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D5F51_05235 PF10531 SLBB domain D5F51_05240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5F51_05240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D5F51_05240 PF00384 Molybdopterin oxidoreductase D5F51_05240 PF01568 Molydopterin dinucleotide binding domain D5F51_05245 PF00146 NADH dehydrogenase D5F51_05250 PF12838 4Fe-4S dicluster domain D5F51_05255 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D5F51_05260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D5F51_05265 PF00361 Proton-conducting membrane transporter D5F51_05265 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D5F51_05270 PF00361 Proton-conducting membrane transporter D5F51_05275 PF00361 Proton-conducting membrane transporter D5F51_05285 PF06496 Protein of unknown function (DUF1097) D5F51_05300 PF01202 Shikimate kinase D5F51_05305 PF00106 short chain dehydrogenase D5F51_05310 PF00356 Bacterial regulatory proteins, lacI family D5F51_05315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5F51_05315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5F51_05320 PF07690 Major Facilitator Superfamily D5F51_05325 PF03928 Haem-degrading D5F51_05335 PF05957 Bacterial protein of unknown function (DUF883) D5F51_05340 PF00425 chorismate binding enzyme D5F51_05345 PF16582 Middle domain of thiamine pyrophosphate D5F51_05345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5F51_05345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5F51_05350 PF12697 Alpha/beta hydrolase family D5F51_05355 PF00378 Enoyl-CoA hydratase/isomerase D5F51_05360 PF13378 Enolase C-terminal domain-like D5F51_05365 PF13193 AMP-binding enzyme C-terminal domain D5F51_05365 PF00501 AMP-binding enzyme D5F51_05370 PF00199 Catalase D5F51_05370 PF06628 Catalase-related immune-responsive D5F51_05375 PF07437 YfaZ precursor D5F51_05380 PF03222 Tryptophan/tyrosine permease family D5F51_05385 PF00994 Probable molybdopterin binding domain D5F51_05390 PF03974 Ecotin D5F51_05395 PF00111 2Fe-2S iron-sulfur cluster binding domain D5F51_05400 PF00268 Ribonucleotide reductase, small chain D5F51_05405 PF02867 Ribonucleotide reductase, barrel domain D5F51_05405 PF03477 ATP cone domain D5F51_05405 PF00317 Ribonucleotide reductase, all-alpha domain D5F51_05415 PF03989 DNA gyrase C-terminal domain, beta-propeller D5F51_05415 PF00521 DNA gyrase/topoisomerase IV, subunit A D5F51_05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_05420 PF00512 His Kinase A (phospho-acceptor) domain D5F51_05420 PF09456 RcsC Alpha-Beta-Loop (ABL) D5F51_05420 PF00072 Response regulator receiver domain D5F51_05425 PF00196 Bacterial regulatory proteins, luxR family D5F51_05425 PF00072 Response regulator receiver domain D5F51_05430 PF01627 Hpt domain D5F51_05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_05430 PF16359 RcsD-ABL domain D5F51_05435 PF07690 Major Facilitator Superfamily D5F51_05445 PF00267 Gram-negative porin D5F51_05460 PF00144 Beta-lactamase D5F51_05470 PF12706 Beta-lactamase superfamily domain D5F51_05475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_05475 PF00672 HAMP domain D5F51_05475 PF02743 Cache domain D5F51_05480 PF06183 DinI-like family D5F51_05485 PF01380 SIS domain D5F51_05485 PF01418 Helix-turn-helix domain, rpiR family D5F51_05490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D5F51_05490 PF00367 phosphotransferase system, EIIB D5F51_05490 PF02378 Phosphotransferase system, EIIC D5F51_05495 PF00232 Glycosyl hydrolase family 1 D5F51_05500 PF00891 O-methyltransferase domain D5F51_05515 PF11893 Domain of unknown function (DUF3413) D5F51_05515 PF00884 Sulfatase D5F51_05520 PF07208 Protein of unknown function (DUF1414) D5F51_05525 PF04245 37-kD nucleoid-associated bacterial protein D5F51_05530 PF01386 Ribosomal L25p family D5F51_05535 PF00271 Helicase conserved C-terminal domain D5F51_05535 PF04851 Type III restriction enzyme, res subunit D5F51_05540 PF01479 S4 domain D5F51_05540 PF00849 RNA pseudouridylate synthase D5F51_05545 PF07690 Major Facilitator Superfamily D5F51_05550 PF13989 YejG-like protein D5F51_05555 PF00005 ABC transporter D5F51_05555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5F51_05560 PF12911 N-terminal TM domain of oligopeptide transport permease C D5F51_05560 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_05565 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_05570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_05575 PF12792 CSS motif domain associated with EAL D5F51_05575 PF00563 EAL domain D5F51_05585 PF00877 NlpC/P60 family D5F51_05590 PF01569 PAP2 superfamily D5F51_05595 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5F51_05595 PF07683 Cobalamin synthesis protein cobW C-terminal domain D5F51_05605 PF00392 Bacterial regulatory proteins, gntR family D5F51_05605 PF07729 FCD domain D5F51_05610 PF08125 Mannitol dehydrogenase C-terminal domain D5F51_05610 PF01232 Mannitol dehydrogenase Rossmann domain D5F51_05620 PF03786 D-mannonate dehydratase (UxuA) D5F51_05625 PF09285 Elongation factor P, C-terminal D5F51_05625 PF01132 Elongation factor P (EF-P) OB domain D5F51_05625 PF08207 Elongation factor P (EF-P) KOW-like domain D5F51_05630 PF03222 Tryptophan/tyrosine permease family D5F51_05635 PF03692 Putative zinc- or iron-chelating domain D5F51_05640 PF13344 Haloacid dehalogenase-like hydrolase D5F51_05640 PF00293 NUDIX domain D5F51_05645 PF00381 PTS HPr component phosphorylation site D5F51_05645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D5F51_05650 PF00294 pfkB family carbohydrate kinase D5F51_05655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D5F51_05655 PF02378 Phosphotransferase system, EIIC D5F51_05660 PF01261 Xylose isomerase-like TIM barrel D5F51_05665 PF03601 Conserved hypothetical protein 698 D5F51_05675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_05675 PF03466 LysR substrate binding domain D5F51_05680 PF00324 Amino acid permease D5F51_05685 PF01032 FecCD transport family D5F51_05690 PF00005 ABC transporter D5F51_05695 PF00593 TonB dependent receptor D5F51_05695 PF07715 TonB-dependent Receptor Plug Domain D5F51_05700 PF00043 Glutathione S-transferase, C-terminal domain D5F51_05700 PF13417 Glutathione S-transferase, N-terminal domain D5F51_05720 PF03180 NLPA lipoprotein D5F51_05725 PF00005 ABC transporter D5F51_05725 PF09383 NIL domain D5F51_05730 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_05735 PF01053 Cys/Met metabolism PLP-dependent enzyme D5F51_05740 PF00291 Pyridoxal-phosphate dependent enzyme D5F51_05740 PF00571 CBS domain D5F51_05745 PF07943 Penicillin-binding protein 5, C-terminal domain D5F51_05745 PF00768 D-alanyl-D-alanine carboxypeptidase D5F51_05750 PF03315 Serine dehydratase beta chain D5F51_05750 PF03313 Serine dehydratase alpha chain D5F51_05760 PF08220 DeoR-like helix-turn-helix domain D5F51_05760 PF00455 DeoR C terminal sensor domain D5F51_05765 PF01791 DeoC/LacD family aldolase D5F51_05770 PF01569 PAP2 superfamily D5F51_05780 PF02080 TrkA-C domain D5F51_05780 PF06826 Predicted Permease Membrane Region D5F51_05785 PF00462 Glutaredoxin D5F51_05790 PF07214 Protein of unknown function (DUF1418) D5F51_05795 PF10722 Putative bacterial sensory transduction regulator D5F51_05800 PF13416 Bacterial extracellular solute-binding protein D5F51_05805 PF08402 TOBE domain D5F51_05805 PF00005 ABC transporter D5F51_05810 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_05815 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_05820 PF10767 Protein of unknown function (DUF2593) D5F51_05825 PF05958 tRNA (Uracil-5-)-methyltransferase D5F51_05830 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_05840 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_05845 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_05850 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_05855 PF00005 ABC transporter D5F51_05860 PF12883 Protein of unknown function (DUF3828) D5F51_05870 PF01370 NAD dependent epimerase/dehydratase family D5F51_05875 PF11066 Protein of unknown function (DUF2867) D5F51_05875 PF13460 NAD(P)H-binding D5F51_05880 PF01212 Beta-eliminating lyase D5F51_05885 PF04072 Leucine carboxyl methyltransferase D5F51_05890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5F51_05890 PF00205 Thiamine pyrophosphate enzyme, central domain D5F51_05890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5F51_05895 PF00111 2Fe-2S iron-sulfur cluster binding domain D5F51_05895 PF00175 Oxidoreductase NAD-binding domain D5F51_05895 PF00970 Oxidoreductase FAD-binding domain D5F51_05900 PF03063 Prismane/CO dehydrogenase family D5F51_05905 PF03956 Lysine exporter LysO D5F51_05910 PF11398 Protein of unknown function (DUF2813) D5F51_05915 PF04393 Protein of unknown function (DUF535) D5F51_05920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5F51_05925 PF12704 MacB-like periplasmic core domain D5F51_05925 PF00005 ABC transporter D5F51_05925 PF02687 FtsX-like permease family D5F51_05930 PF00313 'Cold-shock' DNA-binding domain D5F51_05935 PF02617 ATP-dependent Clp protease adaptor protein ClpS D5F51_05940 PF02861 Clp amino terminal domain, pathogenicity island component D5F51_05940 PF00004 ATPase family associated with various cellular activities (AAA) D5F51_05940 PF17871 AAA lid domain D5F51_05940 PF07724 AAA domain (Cdc48 subfamily) D5F51_05940 PF10431 C-terminal, D2-small domain, of ClpB protein D5F51_05945 PF01176 Translation initiation factor 1A / IF-1 D5F51_05950 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D5F51_05955 PF00005 ABC transporter D5F51_05955 PF00664 ABC transporter transmembrane region D5F51_05960 PF00664 ABC transporter transmembrane region D5F51_05960 PF00005 ABC transporter D5F51_05965 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5F51_05970 PF01037 Lrp/AsnC ligand binding domain D5F51_05975 PF01580 FtsK/SpoIIIE family D5F51_05975 PF09397 Ftsk gamma domain D5F51_05975 PF17854 FtsK alpha domain D5F51_05975 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D5F51_05980 PF03548 Outer membrane lipoprotein carrier protein LolA D5F51_05985 PF16193 AAA C-terminal domain D5F51_05985 PF00004 ATPase family associated with various cellular activities (AAA) D5F51_05985 PF12002 MgsA AAA+ ATPase C terminal D5F51_05995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5F51_05995 PF02403 Seryl-tRNA synthetase N-terminal domain D5F51_06000 PF07690 Major Facilitator Superfamily D5F51_06005 PF04055 Radical SAM superfamily D5F51_06010 PF01228 Glycine radical D5F51_06010 PF02901 Pyruvate formate lyase-like D5F51_06015 PF01226 Formate/nitrite transporter D5F51_06020 PF18381 YcaO cyclodehydratase C-terminal domain D5F51_06020 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D5F51_06025 PF17763 Glutaminase/Asparaginase C-terminal domain D5F51_06025 PF00710 Asparaginase, N-terminal D5F51_06030 PF00266 Aminotransferase class-V D5F51_06035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D5F51_06040 PF02224 Cytidylate kinase D5F51_06045 PF00575 S1 RNA binding domain D5F51_06050 PF00216 Bacterial DNA-binding protein D5F51_06055 PF03772 Competence protein D5F51_06055 PF00753 Metallo-beta-lactamase superfamily D5F51_06060 PF00005 ABC transporter D5F51_06060 PF00664 ABC transporter transmembrane region D5F51_06065 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D5F51_06070 PF07063 Domain of unknown function (DUF1338) D5F51_06075 PF00313 'Cold-shock' DNA-binding domain D5F51_06080 PF00313 'Cold-shock' DNA-binding domain D5F51_06085 PF03966 Trm112p-like protein D5F51_06090 PF02348 Cytidylyltransferase D5F51_06095 PF01636 Phosphotransferase enzyme family D5F51_06100 PF02698 DUF218 domain D5F51_06110 PF17193 MukF C-terminal domain D5F51_06110 PF17192 MukF middle domain D5F51_06110 PF03882 MukF winged-helix domain D5F51_06115 PF04288 MukE-like family D5F51_06120 PF16330 MukB hinge domain D5F51_06120 PF04310 MukB N-terminal D5F51_06125 PF01471 Putative peptidoglycan binding domain D5F51_06125 PF03734 L,D-transpeptidase catalytic domain D5F51_06130 PF05951 Bacterial protein of unknown function (DUF882) D5F51_06135 PF00753 Metallo-beta-lactamase superfamily D5F51_06140 PF12792 CSS motif domain associated with EAL D5F51_06140 PF00563 EAL domain D5F51_06145 PF00155 Aminotransferase class I and II D5F51_06150 PF00267 Gram-negative porin D5F51_06155 PF00152 tRNA synthetases class II (D, K and N) D5F51_06155 PF01336 OB-fold nucleic acid binding domain D5F51_06160 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D5F51_06160 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D5F51_06165 PF00544 Pectate lyase D5F51_06170 PF11940 Domain of unknown function (DUF3458) Ig-like fold D5F51_06170 PF01433 Peptidase family M1 domain D5F51_06170 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D5F51_06175 PF01180 Dihydroorotate dehydrogenase D5F51_06180 PF07126 Cell-division protein ZapC D5F51_06185 PF03476 MOSC N-terminal beta barrel domain D5F51_06185 PF03473 MOSC domain D5F51_06185 PF00111 2Fe-2S iron-sulfur cluster binding domain D5F51_06190 PF10672 S-adenosylmethionine-dependent methyltransferase D5F51_06190 PF01170 Putative RNA methylase family UPF0020 D5F51_06190 PF02926 THUMP domain D5F51_06195 PF00005 ABC transporter D5F51_06195 PF12848 ABC transporter D5F51_06195 PF16326 ABC transporter C-terminal domain D5F51_06200 PF04403 Paraquat-inducible protein A D5F51_06205 PF02470 MlaD protein D5F51_06210 PF03886 ABC-type transport auxiliary lipoprotein component D5F51_06215 PF04957 Ribosome modulation factor D5F51_06220 PF00109 Beta-ketoacyl synthase, N-terminal domain D5F51_06220 PF02801 Beta-ketoacyl synthase, C-terminal domain D5F51_06230 PF07977 FabA-like domain D5F51_06235 PF05362 Lon protease (S16) C-terminal proteolytic domain D5F51_06235 PF13654 AAA domain D5F51_06240 PF06303 MatP N-terminal domain D5F51_06240 PF17414 MatP C-terminal ribbon-helix-helix domain D5F51_06245 PF00691 OmpA family D5F51_06245 PF01389 OmpA-like transmembrane domain D5F51_06250 PF03846 Cell division inhibitor SulA D5F51_06255 PF04994 TfoX C-terminal domain D5F51_06255 PF04993 TfoX N-terminal domain D5F51_06260 PF12805 FUSC-like inner membrane protein yccS D5F51_06265 PF03733 Inner membrane component domain D5F51_06270 PF13361 UvrD-like helicase C-terminal domain D5F51_06270 PF00580 UvrD/REP helicase N-terminal domain D5F51_06270 PF12462 DNA helicase IV / RNA helicase N terminal D5F51_06275 PF02142 MGS-like domain D5F51_06280 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D5F51_06285 PF13380 CoA binding domain D5F51_06290 PF08755 Hemimethylated DNA-binding protein YccV like D5F51_06295 PF10672 S-adenosylmethionine-dependent methyltransferase D5F51_06295 PF17785 PUA-like domain D5F51_06310 PF00708 Acylphosphatase D5F51_06315 PF04358 DsrC like protein D5F51_06325 PF00196 Bacterial regulatory proteins, luxR family D5F51_06325 PF03472 Autoinducer binding domain D5F51_06330 PF00765 Autoinducer synthase D5F51_06340 PF03471 Transporter associated domain D5F51_06340 PF00999 Sodium/hydrogen exchanger family D5F51_06340 PF02080 TrkA-C domain D5F51_06350 PF01757 Acyltransferase family D5F51_06355 PF04349 Periplasmic glucan biosynthesis protein, MdoG D5F51_06360 PF00535 Glycosyl transferase family 2 D5F51_06365 PF07119 Protein of unknown function (DUF1375) D5F51_06375 PF00854 POT family D5F51_06380 PF07690 Major Facilitator Superfamily D5F51_06385 PF07681 DoxX D5F51_06390 PF03279 Bacterial lipid A biosynthesis acyltransferase D5F51_06415 PF01594 AI-2E family transporter D5F51_06420 PF10968 Protein of unknown function (DUF2770) D5F51_06425 PF00196 Bacterial regulatory proteins, luxR family D5F51_06430 PF01266 FAD dependent oxidoreductase D5F51_06435 PF13991 BssS protein family D5F51_06440 PF06183 DinI-like family D5F51_06445 PF01979 Amidohydrolase family D5F51_06450 PF03992 Antibiotic biosynthesis monooxygenase D5F51_06455 PF10150 Ribonuclease E/G family D5F51_06455 PF00575 S1 RNA binding domain D5F51_06455 PF10150 Ribonuclease E/G family D5F51_06455 PF12111 Polyribonucleotide phosphorylase C terminal D5F51_06455 PF12111 Polyribonucleotide phosphorylase C terminal D5F51_06455 PF00575 S1 RNA binding domain D5F51_06465 PF01479 S4 domain D5F51_06465 PF00849 RNA pseudouridylate synthase D5F51_06470 PF02545 Maf-like protein D5F51_06475 PF02620 Large ribosomal RNA subunit accumulation protein YceD D5F51_06480 PF01783 Ribosomal L32p protein family D5F51_06485 PF02504 Fatty acid synthesis protein D5F51_06490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D5F51_06490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D5F51_06495 PF00698 Acyl transferase domain D5F51_06505 PF00550 Phosphopantetheine attachment site D5F51_06510 PF00109 Beta-ketoacyl synthase, N-terminal domain D5F51_06510 PF02801 Beta-ketoacyl synthase, C-terminal domain D5F51_06515 PF01063 Amino-transferase class IV D5F51_06520 PF02618 YceG-like family D5F51_06525 PF02223 Thymidylate kinase D5F51_06530 PF09115 DNA polymerase III, delta subunit, C terminal D5F51_06535 PF01026 TatD related DNase D5F51_06540 PF02378 Phosphotransferase system, EIIC D5F51_06540 PF00367 phosphotransferase system, EIIB D5F51_06545 PF12793 Sugar transport-related sRNA regulator N-term D5F51_06545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_06550 PF08501 Shikimate dehydrogenase substrate binding domain D5F51_06555 PF01230 HIT domain D5F51_06560 PF07233 Protein of unknown function (DUF1425) D5F51_06565 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D5F51_06565 PF13036 Peptidoglycan-synthase activator LpoB D5F51_06570 PF01636 Phosphotransferase enzyme family D5F51_06575 PF00933 Glycosyl hydrolase family 3 N terminal domain D5F51_06580 PF05728 Uncharacterised protein family (UPF0227) D5F51_06585 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5F51_06590 PF05433 Glycine zipper 2TM domain D5F51_06595 PF17757 UvrB interaction domain D5F51_06595 PF02559 CarD-like/TRCF domain D5F51_06595 PF00270 DEAD/DEAH box helicase D5F51_06595 PF00271 Helicase conserved C-terminal domain D5F51_06595 PF03461 TRCF domain D5F51_06600 PF02687 FtsX-like permease family D5F51_06600 PF12704 MacB-like periplasmic core domain D5F51_06605 PF00005 ABC transporter D5F51_06610 PF12704 MacB-like periplasmic core domain D5F51_06610 PF02687 FtsX-like permease family D5F51_06615 PF00480 ROK family D5F51_06620 PF02146 Sir2 family D5F51_06625 PF01546 Peptidase family M20/M25/M40 D5F51_06625 PF07687 Peptidase dimerisation domain D5F51_06630 PF08007 Cupin superfamily protein D5F51_06635 PF08918 PhoQ Sensor D5F51_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_06640 PF00486 Transcriptional regulatory protein, C terminal D5F51_06640 PF00072 Response regulator receiver domain D5F51_06650 PF08328 Adenylosuccinate lyase C-terminal D5F51_06650 PF00206 Lyase D5F51_06655 PF04356 Protein of unknown function (DUF489) D5F51_06665 PF00293 NUDIX domain D5F51_06670 PF00849 RNA pseudouridylate synthase D5F51_06675 PF00180 Isocitrate/isopropylmalate dehydrogenase D5F51_06690 PF01306 LacY proton/sugar symporter D5F51_06695 PF08244 Glycosyl hydrolases family 32 C terminal D5F51_06695 PF00251 Glycosyl hydrolases family 32 N-terminal domain D5F51_06700 PF00356 Bacterial regulatory proteins, lacI family D5F51_06700 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D5F51_06710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_06710 PF08447 PAS fold D5F51_06720 PF11798 IMS family HHH motif D5F51_06720 PF11799 impB/mucB/samB family C-terminal domain D5F51_06720 PF00817 impB/mucB/samB family D5F51_06720 PF13438 Domain of unknown function (DUF4113) D5F51_06725 PF00717 Peptidase S24-like D5F51_06730 PF01053 Cys/Met metabolism PLP-dependent enzyme D5F51_06735 PF05368 NmrA-like family D5F51_06740 PF01638 HxlR-like helix-turn-helix D5F51_06755 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D5F51_06755 PF08666 SAF domain D5F51_06760 PF08125 Mannitol dehydrogenase C-terminal domain D5F51_06760 PF01232 Mannitol dehydrogenase Rossmann domain D5F51_06765 PF00107 Zinc-binding dehydrogenase D5F51_06765 PF08240 Alcohol dehydrogenase GroES-like domain D5F51_06770 PF07729 FCD domain D5F51_06770 PF00392 Bacterial regulatory proteins, gntR family D5F51_06775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5F51_06775 PF13378 Enolase C-terminal domain-like D5F51_06780 PF07690 Major Facilitator Superfamily D5F51_06795 PF07007 Lysozyme inhibitor LprI D5F51_06800 PF06411 HdeA/HdeB family D5F51_06810 PF01590 GAF domain D5F51_06810 PF00990 Diguanylate cyclase, GGDEF domain D5F51_06810 PF00563 EAL domain D5F51_06810 PF00360 Phytochrome region D5F51_06820 PF00005 ABC transporter D5F51_06820 PF00664 ABC transporter transmembrane region D5F51_06830 PF13520 Amino acid permease D5F51_06840 PF12833 Helix-turn-helix domain D5F51_06845 PF10964 Protein of unknown function (DUF2766) D5F51_06850 PF13996 YobH-like protein D5F51_06855 PF13998 MgrB protein D5F51_06860 PF13974 YebO-like protein D5F51_06875 PF00324 Amino acid permease D5F51_06880 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP D5F51_06885 PF10736 Protein of unknown function (DUF2627) D5F51_06890 PF00313 'Cold-shock' DNA-binding domain D5F51_06900 PF03717 Penicillin-binding Protein dimerisation domain D5F51_06900 PF00905 Penicillin binding protein transpeptidase domain D5F51_06905 PF13847 Methyltransferase domain D5F51_06915 PF08448 PAS fold D5F51_06915 PF13426 PAS domain D5F51_06915 PF08447 PAS fold D5F51_06915 PF00990 Diguanylate cyclase, GGDEF domain D5F51_06915 PF05231 MASE1 D5F51_06915 PF00563 EAL domain D5F51_06920 PF00593 TonB dependent receptor D5F51_06920 PF07715 TonB-dependent Receptor Plug Domain D5F51_06925 PF02659 Putative manganese efflux pump D5F51_06930 PF06173 Protein of unknown function (DUF986) D5F51_06935 PF03613 PTS system mannose/fructose/sorbose family IID component D5F51_06940 PF03609 PTS system sorbose-specific iic component D5F51_06945 PF03830 PTS system sorbose subfamily IIB component D5F51_06945 PF03610 PTS system fructose IIA component D5F51_06950 PF03741 Integral membrane protein TerC family D5F51_06950 PF03471 Transporter associated domain D5F51_06955 PF02048 Heat-stable enterotoxin ST D5F51_06960 PF03313 Serine dehydratase alpha chain D5F51_06960 PF03315 Serine dehydratase beta chain D5F51_06965 PF00293 NUDIX domain D5F51_06970 PF00425 chorismate binding enzyme D5F51_06970 PF04715 Anthranilate synthase component I, N terminal region D5F51_06975 PF03701 Uncharacterised protein family (UPF0181) D5F51_06980 PF02222 ATP-grasp domain D5F51_06985 PF03880 DbpA RNA binding domain D5F51_06985 PF00270 DEAD/DEAH box helicase D5F51_06985 PF00271 Helicase conserved C-terminal domain D5F51_06990 PF07130 YebG protein D5F51_07000 PF13995 YebF-like protein D5F51_07005 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D5F51_07005 PF00326 Prolyl oligopeptidase family D5F51_07010 PF00929 Exonuclease D5F51_07015 PF00561 alpha/beta hydrolase fold D5F51_07020 PF06440 DNA polymerase III, theta subunit D5F51_07025 PF00210 Ferritin-like domain D5F51_07030 PF04234 CopC domain D5F51_07035 PF05425 Copper resistance protein D D5F51_07040 PF10709 Protein of unknown function (DUF2511) D5F51_07045 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain D5F51_07045 PF00589 Phage integrase family D5F51_07085 PF01381 Helix-turn-helix D5F51_07145 PF07102 Protein of unknown function (DUF1364) D5F51_07150 PF06530 Phage antitermination protein Q D5F51_07160 PF04245 37-kD nucleoid-associated bacterial protein D5F51_07170 PF00959 Phage lysozyme D5F51_07190 PF02195 ParB-like nuclease domain D5F51_07225 PF06381 Protein of unknown function (DUF1073) D5F51_07235 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) D5F51_07345 PF02413 Caudovirales tail fibre assembly protein, lambda gpK D5F51_07350 PF01757 Acyltransferase family D5F51_07410 PF03797 Autotransporter beta-domain D5F51_07460 PF00657 GDSL-like Lipase/Acylhydrolase D5F51_07460 PF06767 Sif protein D5F51_07465 PF01278 Omptin family D5F51_07485 PF00144 Beta-lactamase D5F51_07490 PF01479 S4 domain D5F51_07490 PF00849 RNA pseudouridylate synthase D5F51_07515 PF14834 Glutathione S-transferase, C-terminal domain D5F51_07515 PF02798 Glutathione S-transferase, N-terminal domain D5F51_07540 PF07351 Protein of unknown function (DUF1480) D5F51_07545 PF00360 Phytochrome region D5F51_07545 PF00990 Diguanylate cyclase, GGDEF domain D5F51_07545 PF01590 GAF domain D5F51_07545 PF00563 EAL domain D5F51_07585 PF03466 LysR substrate binding domain D5F51_07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_07590 PF02470 MlaD protein D5F51_07595 PF04403 Paraquat-inducible protein A D5F51_07600 PF13185 GAF domain D5F51_07605 PF17516 ProQ C-terminal domain D5F51_07605 PF04352 ProQ/FINO family D5F51_07610 PF11818 C-terminal domain of tail specific protease (DUF3340) D5F51_07610 PF00595 PDZ domain D5F51_07610 PF03572 Peptidase family S41 D5F51_07610 PF17804 Tail specific protease N-terminal domain D5F51_07615 PF01435 Peptidase family M48 D5F51_07620 PF07690 Major Facilitator Superfamily D5F51_07625 PF14583 Oligogalacturonate lyase D5F51_07630 PF09339 IclR helix-turn-helix domain D5F51_07630 PF01614 Bacterial transcriptional regulator D5F51_07635 PF01510 N-acetylmuramoyl-L-alanine amidase D5F51_07645 PF04307 LexA-binding, inner membrane-associated putative hydrolase D5F51_07650 PF06178 Oligogalacturonate-specific porin protein (KdgM) D5F51_07660 PF17912 MalK OB fold domain D5F51_07660 PF03459 TOBE domain D5F51_07660 PF00005 ABC transporter D5F51_07665 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_07670 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_07675 PF06917 Periplasmic pectate lyase D5F51_07685 PF04962 KduI/IolB family D5F51_07690 PF07883 Cupin domain D5F51_07695 PF13419 Haloacid dehalogenase-like hydrolase D5F51_07700 PF14002 YniB-like protein D5F51_07705 PF03466 LysR substrate binding domain D5F51_07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_07710 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain D5F51_07710 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain D5F51_07715 PF00378 Enoyl-CoA hydratase/isomerase D5F51_07725 PF01642 Methylmalonyl-CoA mutase D5F51_07725 PF02310 B12 binding domain D5F51_07740 PF00950 ABC 3 transport family D5F51_07745 PF00950 ABC 3 transport family D5F51_07750 PF00005 ABC transporter D5F51_07755 PF01297 Zinc-uptake complex component A periplasmic D5F51_07760 PF01464 Transglycosylase SLT domain D5F51_07765 PF01914 MarC family integral membrane protein D5F51_07790 PF04474 Protein of unknown function (DUF554) D5F51_07795 PF13619 KTSC domain D5F51_07800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5F51_07800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D5F51_07800 PF03129 Anticodon binding domain D5F51_07800 PF02824 TGS domain D5F51_07805 PF05198 Translation initiation factor IF-3, N-terminal domain D5F51_07805 PF00707 Translation initiation factor IF-3, C-terminal domain D5F51_07810 PF01632 Ribosomal protein L35 D5F51_07815 PF00453 Ribosomal protein L20 D5F51_07820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D5F51_07820 PF01409 tRNA synthetases class II core domain (F) D5F51_07825 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D5F51_07825 PF01588 Putative tRNA binding domain D5F51_07825 PF03483 B3/4 domain D5F51_07825 PF03484 tRNA synthetase B5 domain D5F51_07825 PF03147 Ferredoxin-fold anticodon binding domain D5F51_07830 PF00216 Bacterial DNA-binding protein D5F51_07835 PF05154 TM2 domain D5F51_07845 PF01032 FecCD transport family D5F51_07850 PF00255 Glutathione peroxidase D5F51_07855 PF00005 ABC transporter D5F51_07860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D5F51_07865 PF00535 Glycosyl transferase family 2 D5F51_07870 PF01370 NAD dependent epimerase/dehydratase family D5F51_07870 PF00551 Formyl transferase D5F51_07870 PF02911 Formyl transferase, C-terminal domain D5F51_07875 PF01522 Polysaccharide deacetylase D5F51_07880 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D5F51_07885 PF00892 EamA-like transporter family D5F51_07895 PF00877 NlpC/P60 family D5F51_07900 PF10437 Bacterial lipoate protein ligase C-terminus D5F51_07900 PF03099 Biotin/lipoate A/B protein ligase family D5F51_07905 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D5F51_07910 PF01497 Periplasmic binding protein D5F51_07915 PF05171 Haemin-degrading HemS.ChuX domain D5F51_07920 PF00593 TonB dependent receptor D5F51_07920 PF07715 TonB-dependent Receptor Plug Domain D5F51_07925 PF10636 Hemin uptake protein hemP D5F51_07930 PF00793 DAHP synthetase I family D5F51_07935 PF03618 Kinase/pyrophosphorylase D5F51_07940 PF02896 PEP-utilising enzyme, TIM barrel domain D5F51_07940 PF00391 PEP-utilising enzyme, mobile domain D5F51_07940 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D5F51_07950 PF01594 AI-2E family transporter D5F51_07955 PF13183 4Fe-4S dicluster domain D5F51_07955 PF02913 FAD linked oxidases, C-terminal domain D5F51_07955 PF01565 FAD binding domain D5F51_07960 PF03061 Thioesterase superfamily D5F51_07970 PF01521 Iron-sulphur cluster biosynthesis D5F51_07975 PF01458 Uncharacterized protein family (UPF0051) D5F51_07980 PF00005 ABC transporter D5F51_07985 PF01458 Uncharacterized protein family (UPF0051) D5F51_07990 PF00266 Aminotransferase class-V D5F51_07995 PF02657 Fe-S metabolism associated domain D5F51_08000 PF03734 L,D-transpeptidase catalytic domain D5F51_08000 PF17969 L,D-transpeptidase C-terminal domain D5F51_08000 PF01476 LysM domain D5F51_08005 PF04728 Lipoprotein leucine-zipper D5F51_08010 PF00224 Pyruvate kinase, barrel domain D5F51_08010 PF02887 Pyruvate kinase, alpha/beta domain D5F51_08030 PF01554 MatE D5F51_08035 PF00677 Lumazine binding domain D5F51_08045 PF07690 Major Facilitator Superfamily D5F51_08050 PF03466 LysR substrate binding domain D5F51_08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_08055 PF00356 Bacterial regulatory proteins, lacI family D5F51_08065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D5F51_08065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D5F51_08070 PF00877 NlpC/P60 family D5F51_08075 PF00462 Glutaredoxin D5F51_08080 PF00929 Exonuclease D5F51_08085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5F51_08090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5F51_08095 PF16925 Tetracyclin repressor-like, C-terminal domain D5F51_08095 PF00440 Bacterial regulatory proteins, tetR family D5F51_08100 PF08019 Phosphoethanolamine transferase EptA/EptB D5F51_08100 PF00884 Sulfatase D5F51_08105 PF06945 Protein of unknown function (DUF1289) D5F51_08110 PF00248 Aldo/keto reductase family D5F51_08115 PF04632 Fusaric acid resistance protein family D5F51_08120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5F51_08120 PF00529 HlyD membrane-fusion protein of T1SS D5F51_08125 PF07869 Protein of unknown function (DUF1656) D5F51_08130 PF01047 MarR family D5F51_08135 PF05433 Glycine zipper 2TM domain D5F51_08140 PF03702 Anhydro-N-acetylmuramic acid kinase D5F51_08145 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme D5F51_08150 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D5F51_08150 PF01243 Pyridoxamine 5'-phosphate oxidase D5F51_08155 PF01479 S4 domain D5F51_08155 PF00579 tRNA synthetases class I (W and Y) D5F51_08160 PF08543 Phosphomethylpyrimidine kinase D5F51_08165 PF02798 Glutathione S-transferase, N-terminal domain D5F51_08165 PF00043 Glutathione S-transferase, C-terminal domain D5F51_08170 PF11656 YjbD family (DUF3811) D5F51_08175 PF04893 Yip1 domain D5F51_08185 PF00854 POT family D5F51_08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_08190 PF03466 LysR substrate binding domain D5F51_08230 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_08235 PF13953 PapC C-terminal domain D5F51_08235 PF00577 Outer membrane usher protein D5F51_08235 PF13954 PapC N-terminal domain D5F51_08240 PF00005 ABC transporter D5F51_08245 PF00005 ABC transporter D5F51_08245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5F51_08250 PF12911 N-terminal TM domain of oligopeptide transport permease C D5F51_08250 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_08255 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_08260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_08270 PF00158 Sigma-54 interaction domain D5F51_08270 PF02954 Bacterial regulatory protein, Fis family D5F51_08275 PF04012 PspA/IM30 family D5F51_08280 PF06667 Phage shock protein B D5F51_08285 PF04024 PspC domain D5F51_08295 PF04317 YcjX-like family, DUF463 D5F51_08300 PF05128 Domain of unknown function (DUF697) D5F51_08315 PF00158 Sigma-54 interaction domain D5F51_08315 PF18024 Helix-turn-helix domain D5F51_08320 PF08534 Redoxin D5F51_08325 PF13378 Enolase C-terminal domain-like D5F51_08325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5F51_08330 PF00246 Zinc carboxypeptidase D5F51_08335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_08350 PF01544 CorA-like Mg2+ transporter protein D5F51_08355 PF01171 PP-loop family D5F51_08360 PF00388 Phosphatidylinositol-specific phospholipase C, X domain D5F51_08365 PF00072 Response regulator receiver domain D5F51_08365 PF00196 Bacterial regulatory proteins, luxR family D5F51_08370 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase D5F51_08370 PF10371 Domain of unknown function D5F51_08370 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg D5F51_08370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5F51_08370 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II D5F51_08375 PF00893 Small Multidrug Resistance protein D5F51_08385 PF03891 Domain of unknown function (DUF333) D5F51_08390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5F51_08390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5F51_08395 PF11739 Dicarboxylate transport D5F51_08400 PF13617 YnbE-like lipoprotein D5F51_08405 PF07027 Protein of unknown function (DUF1318) D5F51_08410 PF07690 Major Facilitator Superfamily D5F51_08415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5F51_08415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5F51_08420 PF01232 Mannitol dehydrogenase Rossmann domain D5F51_08420 PF08125 Mannitol dehydrogenase C-terminal domain D5F51_08425 PF00325 Bacterial regulatory proteins, crp family D5F51_08425 PF04198 Putative sugar-binding domain D5F51_08430 PF02525 Flavodoxin-like fold D5F51_08435 PF00270 DEAD/DEAH box helicase D5F51_08435 PF11898 Domain of unknown function (DUF3418) D5F51_08435 PF00271 Helicase conserved C-terminal domain D5F51_08435 PF04408 Helicase associated domain (HA2) D5F51_08435 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D5F51_08440 PF05973 Phage derived protein Gp49-like (DUF891) D5F51_08445 PF01381 Helix-turn-helix D5F51_08450 PF00089 Trypsin D5F51_08460 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D5F51_08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_08465 PF00672 HAMP domain D5F51_08465 PF00512 His Kinase A (phospho-acceptor) domain D5F51_08470 PF00486 Transcriptional regulatory protein, C terminal D5F51_08470 PF00072 Response regulator receiver domain D5F51_08480 PF13520 Amino acid permease D5F51_08485 PF07338 Protein of unknown function (DUF1471) D5F51_08495 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D5F51_08495 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D5F51_08495 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D5F51_08500 PF02233 NAD(P) transhydrogenase beta subunit D5F51_08505 PF00582 Universal stress protein family D5F51_08510 PF00027 Cyclic nucleotide-binding domain D5F51_08510 PF13545 Crp-like helix-turn-helix domain D5F51_08515 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D5F51_08515 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D5F51_08530 PF06445 GyrI-like small molecule binding domain D5F51_08535 PF03466 LysR substrate binding domain D5F51_08535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_08545 PF00245 Alkaline phosphatase D5F51_08550 PF00294 pfkB family carbohydrate kinase D5F51_08555 PF07690 Major Facilitator Superfamily D5F51_08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_08570 PF03466 LysR substrate binding domain D5F51_08580 PF13419 Haloacid dehalogenase-like hydrolase D5F51_08590 PF01842 ACT domain D5F51_08595 PF00205 Thiamine pyrophosphate enzyme, central domain D5F51_08595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5F51_08595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5F51_08610 PF16970 Type-1 fimbrial protein, A D5F51_08615 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_08615 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_08620 PF13953 PapC C-terminal domain D5F51_08620 PF00577 Outer membrane usher protein D5F51_08620 PF13954 PapC N-terminal domain D5F51_08630 PF17287 POTRA domain D5F51_08630 PF08479 POTRA domain, ShlB-type D5F51_08630 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D5F51_08635 PF05860 haemagglutination activity domain D5F51_08635 PF13018 Extended Signal Peptide of Type V secretion system D5F51_08635 PF13018 Extended Signal Peptide of Type V secretion system D5F51_08635 PF05594 Haemagluttinin repeat D5F51_08635 PF13332 Hemagglutinin repeat D5F51_08635 PF05860 haemagglutination activity domain D5F51_08635 PF13332 Hemagglutinin repeat D5F51_08635 PF05594 Haemagluttinin repeat D5F51_08640 PF00486 Transcriptional regulatory protein, C terminal D5F51_08650 PF00072 Response regulator receiver domain D5F51_08650 PF00196 Bacterial regulatory proteins, luxR family D5F51_08675 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus D5F51_08675 PF01048 Phosphorylase superfamily D5F51_08680 PF03466 LysR substrate binding domain D5F51_08680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_08700 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_08705 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_08710 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_08715 PF01037 Lrp/AsnC ligand binding domain D5F51_08725 PF02798 Glutathione S-transferase, N-terminal domain D5F51_08755 PF07690 Major Facilitator Superfamily D5F51_08760 PF00106 short chain dehydrogenase D5F51_08765 PF02694 Uncharacterised BCR, YnfA/UPF0060 family D5F51_08770 PF06932 Protein of unknown function (DUF1283) D5F51_08775 PF06649 Protein of unknown function (DUF1161) D5F51_08785 PF00654 Voltage gated chloride channel D5F51_08795 PF00480 ROK family D5F51_08800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_08800 PF03466 LysR substrate binding domain D5F51_08805 PF07690 Major Facilitator Superfamily D5F51_08820 PF05472 DNA replication terminus site-binding protein (Ter protein) D5F51_08825 PF07298 NnrU protein D5F51_08830 PF00206 Lyase D5F51_08830 PF10415 Fumarase C C-terminus D5F51_08835 PF01238 Phosphomannose isomerase type I D5F51_08840 PF06097 Bacterial protein of unknown function (DUF945) D5F51_08845 PF00356 Bacterial regulatory proteins, lacI family D5F51_08845 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D5F51_08850 PF00367 phosphotransferase system, EIIB D5F51_08850 PF02378 Phosphotransferase system, EIIC D5F51_08855 PF00155 Aminotransferase class I and II D5F51_08860 PF00962 Adenosine/AMP deaminase D5F51_08865 PF13593 SBF-like CPA transporter family (DUF4137) D5F51_08870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5F51_08870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5F51_08875 PF12833 Helix-turn-helix domain D5F51_08875 PF02311 AraC-like ligand binding domain D5F51_08880 PF02653 Branched-chain amino acid transport system / permease component D5F51_08885 PF00005 ABC transporter D5F51_08890 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D5F51_08895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5F51_08900 PF11762 L-arabinose isomerase C-terminal domain D5F51_08900 PF02610 L-arabinose isomerase D5F51_08905 PF02463 RecF/RecN/SMC N terminal domain D5F51_08910 PF03412 Peptidase C39 family D5F51_08910 PF00664 ABC transporter transmembrane region D5F51_08910 PF00005 ABC transporter D5F51_08920 PF03412 Peptidase C39 family D5F51_08920 PF00664 ABC transporter transmembrane region D5F51_08920 PF00005 ABC transporter D5F51_08930 PF01268 Formate--tetrahydrofolate ligase D5F51_08935 PF10754 Protein of unknown function (DUF2569) D5F51_08940 PF02508 Rnf-Nqr subunit, membrane protein D5F51_08945 PF04060 Putative Fe-S cluster D5F51_08950 PF13237 4Fe-4S dicluster domain D5F51_08950 PF10531 SLBB domain D5F51_08950 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5F51_08950 PF13375 RnfC Barrel sandwich hybrid domain D5F51_08955 PF06445 GyrI-like small molecule binding domain D5F51_08955 PF12833 Helix-turn-helix domain D5F51_08960 PF03116 NQR2, RnfD, RnfE family D5F51_08965 PF04205 FMN-binding domain D5F51_08970 PF02508 Rnf-Nqr subunit, membrane protein D5F51_08975 PF10576 Iron-sulfur binding domain of endonuclease III D5F51_08975 PF00730 HhH-GPD superfamily base excision DNA repair protein D5F51_08975 PF00633 Helix-hairpin-helix motif D5F51_08985 PF00384 Molybdopterin oxidoreductase D5F51_08990 PF08206 Ribonuclease B OB domain D5F51_08990 PF00773 RNB domain D5F51_08990 PF00575 S1 RNA binding domain D5F51_08995 PF13722 5TM C-terminal transporter carbon starvation CstA D5F51_08995 PF02554 Carbon starvation protein CstA D5F51_09000 PF04328 Selenoprotein, putative D5F51_09005 PF00923 Transaldolase/Fructose-6-phosphate aldolase D5F51_09010 PF00455 DeoR C terminal sensor domain D5F51_09010 PF08220 DeoR-like helix-turn-helix domain D5F51_09020 PF00596 Class II Aldolase and Adducin N-terminal domain D5F51_09025 PF05433 Glycine zipper 2TM domain D5F51_09030 PF01253 Translation initiation factor SUI1 D5F51_09035 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D5F51_09040 PF07338 Protein of unknown function (DUF1471) D5F51_09045 PF03594 Benzoate membrane transport protein D5F51_09050 PF07883 Cupin domain D5F51_09050 PF01381 Helix-turn-helix D5F51_09060 PF18073 Rubredoxin metal binding domain D5F51_09065 PF06305 Lipopolysaccharide assembly protein A domain D5F51_09070 PF01569 PAP2 superfamily D5F51_09075 PF00925 GTP cyclohydrolase II D5F51_09080 PF00330 Aconitase family (aconitate hydratase) D5F51_09080 PF00694 Aconitase C-terminal domain D5F51_09095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_09095 PF03466 LysR substrate binding domain D5F51_09100 PF08272 Topoisomerase I zinc-ribbon-like D5F51_09100 PF01131 DNA topoisomerase D5F51_09100 PF01751 Toprim domain D5F51_09100 PF01396 Topoisomerase DNA binding C4 zinc finger D5F51_09110 PF10692 Protein of unknown function (DUF2498) D5F51_09115 PF08496 Peptidase family S49 N-terminal D5F51_09115 PF01343 Peptidase family S49 D5F51_09120 PF00106 short chain dehydrogenase D5F51_09125 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D5F51_09125 PF12557 Cob(I)alamin adenosyltransferase N terminal D5F51_09130 PF01479 S4 domain D5F51_09130 PF00849 RNA pseudouridylate synthase D5F51_09155 PF00072 Response regulator receiver domain D5F51_09155 PF00196 Bacterial regulatory proteins, luxR family D5F51_09160 PF03797 Autotransporter beta-domain D5F51_09165 PF01300 Telomere recombination D5F51_09170 PF02811 PHP domain D5F51_09180 PF04715 Anthranilate synthase component I, N terminal region D5F51_09180 PF00425 chorismate binding enzyme D5F51_09185 PF00117 Glutamine amidotransferase class-I D5F51_09190 PF00591 Glycosyl transferase family, a/b domain D5F51_09190 PF02885 Glycosyl transferase family, helical bundle domain D5F51_09195 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D5F51_09195 PF00218 Indole-3-glycerol phosphate synthase D5F51_09200 PF00291 Pyridoxal-phosphate dependent enzyme D5F51_09205 PF00290 Tryptophan synthase alpha chain D5F51_09215 PF03922 OmpW family D5F51_09235 PF04279 Intracellular septation protein A D5F51_09240 PF03061 Thioesterase superfamily D5F51_09245 PF03544 Gram-negative bacterial TonB protein C-terminal D5F51_09250 PF03795 YCII-related domain D5F51_09275 PF13091 PLD-like domain D5F51_09275 PF13396 Phospholipase_D-nuclease N-terminal D5F51_09280 PF04269 Protein of unknown function, DUF440 D5F51_09285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5F51_09285 PF00005 ABC transporter D5F51_09290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5F51_09290 PF00005 ABC transporter D5F51_09295 PF12911 N-terminal TM domain of oligopeptide transport permease C D5F51_09295 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_09300 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_09305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_09310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_09315 PF01914 MarC family integral membrane protein D5F51_09325 PF00171 Aldehyde dehydrogenase family D5F51_09325 PF00465 Iron-containing alcohol dehydrogenase D5F51_09330 PF00265 Thymidine kinase D5F51_09340 PF00816 H-NS histone family D5F51_09345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D5F51_09345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D5F51_09345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D5F51_09350 PF00072 Response regulator receiver domain D5F51_09355 PF01734 Patatin-like phospholipase D5F51_09360 PF02810 SEC-C motif D5F51_09365 PF00551 Formyl transferase D5F51_09365 PF01842 ACT domain D5F51_09395 PF03372 Endonuclease/Exonuclease/phosphatase family D5F51_09400 PF00293 NUDIX domain D5F51_09405 PF07383 Protein of unknown function (DUF1496) D5F51_09410 PF01131 DNA topoisomerase D5F51_09410 PF01751 Toprim domain D5F51_09415 PF00586 AIR synthase related protein, N-terminal domain D5F51_09415 PF02769 AIR synthase related protein, C-terminal domain D5F51_09420 PF00881 Nitroreductase family D5F51_09425 PF01343 Peptidase family S49 D5F51_09430 PF17763 Glutaminase/Asparaginase C-terminal domain D5F51_09430 PF00710 Asparaginase, N-terminal D5F51_09435 PF00857 Isochorismatase family D5F51_09440 PF07023 Protein of unknown function (DUF1315) D5F51_09445 PF01641 SelR domain D5F51_09450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D5F51_09450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D5F51_09455 PF01263 Aldose 1-epimerase D5F51_09460 PF06629 MltA-interacting protein MipA D5F51_09470 PF06798 PrkA serine protein kinase C-terminal domain D5F51_09470 PF08298 PrkA AAA domain D5F51_09475 PF04285 Protein of unknown function (DUF444) D5F51_09490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_09490 PF03466 LysR substrate binding domain D5F51_09495 PF02678 Pirin D5F51_09495 PF05726 Pirin C-terminal cupin domain D5F51_09500 PF00563 EAL domain D5F51_09500 PF13426 PAS domain D5F51_09500 PF00990 Diguanylate cyclase, GGDEF domain D5F51_09505 PF07690 Major Facilitator Superfamily D5F51_09510 PF00842 Alanine racemase, C-terminal domain D5F51_09510 PF01168 Alanine racemase, N-terminal domain D5F51_09515 PF01266 FAD dependent oxidoreductase D5F51_09520 PF04293 SpoVR like protein D5F51_09525 PF07840 FadR C-terminal domain D5F51_09525 PF00392 Bacterial regulatory proteins, gntR family D5F51_09530 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D5F51_09535 PF02600 Disulfide bond formation protein DsbB D5F51_09545 PF03692 Putative zinc- or iron-chelating domain D5F51_09550 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5F51_09555 PF13406 Transglycosylase SLT domain D5F51_09560 PF05166 YcgL domain D5F51_09570 PF03775 Septum formation inhibitor MinC, C-terminal domain D5F51_09570 PF05209 Septum formation inhibitor MinC, N-terminal domain D5F51_09575 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5F51_09580 PF03776 Septum formation topological specificity factor MinE D5F51_09585 PF00570 HRDC domain D5F51_09585 PF01612 3'-5' exonuclease D5F51_09590 PF13193 AMP-binding enzyme C-terminal domain D5F51_09590 PF00501 AMP-binding enzyme D5F51_09595 PF03843 Outer membrane lipoprotein Slp family D5F51_09600 PF00814 Glycoprotease family D5F51_09605 PF13307 Helicase C-terminal domain D5F51_09605 PF04851 Type III restriction enzyme, res subunit D5F51_09610 PF01042 Endoribonuclease L-PSP D5F51_09615 PF00893 Small Multidrug Resistance protein D5F51_09620 PF00893 Small Multidrug Resistance protein D5F51_09625 PF01081 KDPG and KHG aldolase D5F51_09630 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D5F51_09630 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D5F51_09635 PF01380 SIS domain D5F51_09635 PF01418 Helix-turn-helix domain, rpiR family D5F51_09640 PF02887 Pyruvate kinase, alpha/beta domain D5F51_09640 PF00224 Pyruvate kinase, barrel domain D5F51_09645 PF03279 Bacterial lipid A biosynthesis acyltransferase D5F51_09650 PF08525 Opacity-associated protein A N-terminal motif D5F51_09650 PF01551 Peptidase family M23 D5F51_09650 PF01476 LysM domain D5F51_09655 PF01297 Zinc-uptake complex component A periplasmic D5F51_09660 PF00005 ABC transporter D5F51_09665 PF00950 ABC 3 transport family D5F51_09670 PF00854 POT family D5F51_09675 PF05491 RuvB C-terminal winged helix domain D5F51_09675 PF17864 RuvB AAA lid domain D5F51_09675 PF05496 Holliday junction DNA helicase RuvB P-loop domain D5F51_09680 PF07499 RuvA, C-terminal domain D5F51_09680 PF01330 RuvA N terminal domain D5F51_09685 PF02075 Crossover junction endodeoxyribonuclease RuvC D5F51_09690 PF01709 Transcriptional regulator D5F51_09695 PF00293 NUDIX domain D5F51_09700 PF01336 OB-fold nucleic acid binding domain D5F51_09700 PF02938 GAD domain D5F51_09700 PF00152 tRNA synthetases class II (D, K and N) D5F51_09710 PF00857 Isochorismatase family D5F51_09715 PF01904 Protein of unknown function DUF72 D5F51_09720 PF01124 MAPEG family D5F51_09725 PF13649 Methyltransferase domain D5F51_09730 PF08003 Protein of unknown function (DUF1698) D5F51_09735 PF03932 CutC family D5F51_09740 PF06185 YecM protein D5F51_09745 PF03485 Arginyl tRNA synthetase N terminal domain D5F51_09745 PF05746 DALR anticodon binding domain D5F51_09745 PF00750 tRNA synthetases class I (R) D5F51_09750 PF03023 Lipid II flippase MurJ D5F51_09755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5F51_09760 PF04337 Protein of unknown function, DUF480 D5F51_09765 PF13302 Acetyltransferase (GNAT) domain D5F51_09770 PF07690 Major Facilitator Superfamily D5F51_09775 PF07273 Protein of unknown function (DUF1439) D5F51_09780 PF02613 Nitrate reductase delta subunit D5F51_09785 PF02811 PHP domain D5F51_09790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5F51_09805 PF03009 Glycerophosphoryl diester phosphodiesterase family D5F51_09815 PF00916 Sulfate permease family D5F51_09815 PF01740 STAS domain D5F51_09820 PF00793 DAHP synthetase I family D5F51_09825 PF13369 Transglutaminase-like superfamily D5F51_09830 PF04247 Invasion gene expression up-regulator, SirB D5F51_09835 PF17827 PrmC N-terminal domain D5F51_09835 PF13847 Methyltransferase domain D5F51_09840 PF03462 PCRF domain D5F51_09840 PF00472 RF-1 domain D5F51_09845 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D5F51_09845 PF01488 Shikimate / quinate 5-dehydrogenase D5F51_09845 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D5F51_09850 PF03550 Outer membrane lipoprotein LolB D5F51_09855 PF08544 GHMP kinases C terminal D5F51_09855 PF00288 GHMP kinases N terminal domain D5F51_09860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D5F51_09860 PF14572 Phosphoribosyl synthetase-associated domain D5F51_09865 PF10762 Protein of unknown function (DUF2583) D5F51_09870 PF01195 Peptidyl-tRNA hydrolase D5F51_09880 PF01926 50S ribosome-binding GTPase D5F51_09880 PF06071 Protein of unknown function (DUF933) D5F51_09900 PF01476 LysM domain D5F51_09900 PF01551 Peptidase family M23 D5F51_09910 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment D5F51_09915 PF02653 Branched-chain amino acid transport system / permease component D5F51_09920 PF00005 ABC transporter D5F51_09925 PF13407 Periplasmic binding protein domain D5F51_09930 PF05962 HutD D5F51_09935 PF01979 Amidohydrolase family D5F51_09940 PF07702 UTRA domain D5F51_09940 PF00392 Bacterial regulatory proteins, gntR family D5F51_09945 PF01979 Amidohydrolase family D5F51_09960 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D5F51_09965 PF04996 Succinylarginine dihydrolase D5F51_09970 PF00171 Aldehyde dehydrogenase family D5F51_09975 PF04958 Arginine N-succinyltransferase beta subunit D5F51_09980 PF00202 Aminotransferase class-III D5F51_09990 PF00155 Aminotransferase class I and II D5F51_09990 PF00392 Bacterial regulatory proteins, gntR family D5F51_09995 PF01654 Cytochrome bd terminal oxidase subunit I D5F51_10000 PF02322 Cytochrome bd terminal oxidase subunit II D5F51_10010 PF00672 HAMP domain D5F51_10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_10010 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D5F51_10010 PF07730 Histidine kinase D5F51_10015 PF03466 LysR substrate binding domain D5F51_10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_10025 PF01699 Sodium/calcium exchanger protein D5F51_10030 PF02562 PhoH-like protein D5F51_10045 PF13994 PgaD-like protein D5F51_10050 PF00535 Glycosyl transferase family 2 D5F51_10055 PF01522 Polysaccharide deacetylase D5F51_10055 PF14883 Hypothetical glycosyl hydrolase family 13 D5F51_10065 PF00557 Metallopeptidase family M24 D5F51_10075 PF09313 Domain of unknown function (DUF1971) D5F51_10075 PF03848 Tellurite resistance protein TehB D5F51_10085 PF00578 AhpC/TSA family D5F51_10090 PF02687 FtsX-like permease family D5F51_10090 PF12704 MacB-like periplasmic core domain D5F51_10090 PF00005 ABC transporter D5F51_10100 PF00005 ABC transporter D5F51_10100 PF12704 MacB-like periplasmic core domain D5F51_10100 PF02687 FtsX-like permease family D5F51_10110 PF10634 Fe2+ transport protein D5F51_10115 PF03239 Iron permease FTR1 family D5F51_10125 PF01804 Penicillin amidase D5F51_10135 PF04960 Glutaminase D5F51_10140 PF01261 Xylose isomerase-like TIM barrel D5F51_10145 PF00596 Class II Aldolase and Adducin N-terminal domain D5F51_10150 PF07005 Sugar-binding N-terminal domain D5F51_10150 PF17042 Nucleotide-binding C-terminal domain D5F51_10155 PF00455 DeoR C terminal sensor domain D5F51_10155 PF08220 DeoR-like helix-turn-helix domain D5F51_10160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_10160 PF00989 PAS fold D5F51_10160 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D5F51_10160 PF17203 Single cache domain 3 D5F51_10165 PF00072 Response regulator receiver domain D5F51_10170 PF03390 2-hydroxycarboxylate transporter family D5F51_10175 PF00324 Amino acid permease D5F51_10185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5F51_10195 PF07690 Major Facilitator Superfamily D5F51_10205 PF00849 RNA pseudouridylate synthase D5F51_10210 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D5F51_10225 PF00583 Acetyltransferase (GNAT) family D5F51_10245 PF00872 Transposase, Mutator family D5F51_10270 PF02899 Phage integrase, N-terminal SAM-like domain D5F51_10270 PF00589 Phage integrase family D5F51_10285 PF16452 Bacteriophage CI repressor C-terminal domain D5F51_10285 PF07022 Bacteriophage CI repressor helix-turn-helix domain D5F51_10295 PF06892 Phage regulatory protein CII (CP76) D5F51_10315 PF05840 Bacteriophage replication gene A protein (GPA) D5F51_10475 PF04606 Ogr/Delta-like zinc finger D5F51_10495 PF01066 CDP-alcohol phosphatidyltransferase D5F51_10500 PF02151 UvrB/uvrC motif D5F51_10500 PF08459 UvrC Helix-hairpin-helix N-terminal D5F51_10500 PF01541 GIY-YIG catalytic domain D5F51_10505 PF00072 Response regulator receiver domain D5F51_10505 PF00196 Bacterial regulatory proteins, luxR family D5F51_10510 PF10769 Protein of unknown function (DUF2594) D5F51_10515 PF06942 GlpM protein D5F51_10525 PF00128 Alpha amylase, catalytic domain D5F51_10525 PF02806 Alpha amylase, C-terminal all-beta domain D5F51_10540 PF08241 Methyltransferase domain D5F51_10565 PF00324 Amino acid permease D5F51_10575 PF01161 Phosphatidylethanolamine-binding protein D5F51_10580 PF01344 Kelch motif D5F51_10600 PF03358 NADPH-dependent FMN reductase D5F51_10605 PF04261 Dyp-type peroxidase family D5F51_10610 PF09375 Imelysin D5F51_10610 PF13473 Cupredoxin-like domain D5F51_10615 PF03239 Iron permease FTR1 family D5F51_10620 PF00474 Sodium:solute symporter family D5F51_10625 PF14850 DNA-binding domain of Proline dehydrogenase D5F51_10625 PF01619 Proline dehydrogenase D5F51_10625 PF00171 Aldehyde dehydrogenase family D5F51_10625 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D5F51_10655 PF00291 Pyridoxal-phosphate dependent enzyme D5F51_10660 PF02899 Phage integrase, N-terminal SAM-like domain D5F51_10665 PF04539 Sigma-70 region 3 D5F51_10665 PF04542 Sigma-70 region 2 D5F51_10665 PF04545 Sigma-70, region 4 D5F51_10670 PF00669 Bacterial flagellin N-terminal helical region D5F51_10670 PF00700 Bacterial flagellin C-terminal helical region D5F51_10675 PF07196 Flagellin hook IN motif D5F51_10675 PF02465 Flagellar hook-associated protein 2 N-terminus D5F51_10675 PF07195 Flagellar hook-associated protein 2 C-terminus D5F51_10680 PF02561 Flagellar protein FliS D5F51_10685 PF05400 Flagellar protein FliT D5F51_10690 PF12833 Helix-turn-helix domain D5F51_10695 PF01966 HD domain D5F51_10705 PF07487 SopE GEF domain D5F51_10705 PF05364 Salmonella type III secretion SopE effector N-terminus D5F51_10715 PF02049 Flagellar hook-basal body complex protein FliE D5F51_10720 PF01514 Secretory protein of YscJ/FliF family D5F51_10720 PF08345 Flagellar M-ring protein C-terminal D5F51_10725 PF01706 FliG C-terminal domain D5F51_10725 PF14841 FliG middle domain D5F51_10725 PF14842 FliG N-terminal domain D5F51_10730 PF02108 Flagellar assembly protein FliH D5F51_10735 PF18269 T3SS EscN ATPase C-terminal domain D5F51_10735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5F51_10740 PF02050 Flagellar FliJ protein D5F51_10745 PF02120 Flagellar hook-length control protein FliK D5F51_10750 PF03748 Flagellar basal body-associated protein FliL D5F51_10755 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5F51_10755 PF02154 Flagellar motor switch protein FliM D5F51_10760 PF16973 Flagellar motor switch protein FliN N-terminal D5F51_10760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5F51_10765 PF04347 Flagellar biosynthesis protein, FliO D5F51_10770 PF00813 FliP family D5F51_10775 PF01313 Bacterial export proteins, family 3 D5F51_10780 PF01311 Bacterial export proteins, family 1 D5F51_10785 PF00669 Bacterial flagellin N-terminal helical region D5F51_10790 PF00460 Flagella basal body rod protein D5F51_10790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5F51_10795 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D5F51_10795 PF10135 Rod binding protein D5F51_10800 PF02119 Flagellar P-ring protein D5F51_10805 PF02107 Flagellar L-ring protein D5F51_10810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5F51_10810 PF00460 Flagella basal body rod protein D5F51_10815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5F51_10815 PF00460 Flagella basal body rod protein D5F51_10820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5F51_10820 PF00460 Flagella basal body rod protein D5F51_10820 PF07559 Flagellar basal body protein FlaE D5F51_10825 PF13861 FlgD Tudor-like domain D5F51_10825 PF03963 Flagellar hook capping protein - N-terminal region D5F51_10825 PF13860 FlgD Ig-like domain D5F51_10830 PF00460 Flagella basal body rod protein D5F51_10830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5F51_10835 PF00460 Flagella basal body rod protein D5F51_10840 PF17656 FlgA N-terminal domain D5F51_10840 PF13144 Chaperone for flagella basal body P-ring formation D5F51_10845 PF04316 Anti-sigma-28 factor, FlgM D5F51_10850 PF05130 FlgN protein D5F51_10855 PF06366 Flagellar protein FlhE D5F51_10860 PF00771 FHIPEP family D5F51_10865 PF01312 FlhB HrpN YscU SpaS Family D5F51_10870 PF04344 Chemotaxis phosphatase, CheZ D5F51_10875 PF00072 Response regulator receiver domain D5F51_10880 PF00072 Response regulator receiver domain D5F51_10880 PF01339 CheB methylesterase D5F51_10885 PF03705 CheR methyltransferase, all-alpha domain D5F51_10885 PF01739 CheR methyltransferase, SAM binding domain D5F51_10890 PF02203 Tar ligand binding domain homologue D5F51_10890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_10890 PF00672 HAMP domain D5F51_10895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_10895 PF00672 HAMP domain D5F51_10895 PF02203 Tar ligand binding domain homologue D5F51_10900 PF01584 CheW-like domain D5F51_10905 PF01584 CheW-like domain D5F51_10905 PF09078 CheY binding D5F51_10905 PF01627 Hpt domain D5F51_10905 PF02895 Signal transducing histidine kinase, homodimeric domain D5F51_10905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_10910 PF13677 Membrane MotB of proton-channel complex MotA/MotB D5F51_10910 PF00691 OmpA family D5F51_10915 PF01618 MotA/TolQ/ExbB proton channel family D5F51_10920 PF05280 Flagellar transcriptional activator (FlhC) D5F51_10925 PF05247 Flagellar transcriptional activator (FlhD) D5F51_10930 PF00582 Universal stress protein family D5F51_10935 PF00690 Cation transporter/ATPase, N-terminus D5F51_10935 PF00689 Cation transporting ATPase, C-terminus D5F51_10940 PF02308 MgtC family D5F51_10945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_10945 PF02203 Tar ligand binding domain homologue D5F51_10945 PF00672 HAMP domain D5F51_10950 PF10781 Dextransucrase DSRB D5F51_10955 PF00313 'Cold-shock' DNA-binding domain D5F51_10960 PF00356 Bacterial regulatory proteins, lacI family D5F51_10965 PF16353 Domain of unknown function(DUF4981) D5F51_10965 PF00703 Glycosyl hydrolases family 2 D5F51_10965 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D5F51_10965 PF02837 Glycosyl hydrolases family 2, sugar binding domain D5F51_10965 PF02929 Beta galactosidase small chain D5F51_10970 PF00107 Zinc-binding dehydrogenase D5F51_10970 PF08240 Alcohol dehydrogenase GroES-like domain D5F51_10975 PF10777 Inner membrane protein YlaC D5F51_10980 PF01037 Lrp/AsnC ligand binding domain D5F51_10990 PF14001 YdfZ protein D5F51_10995 PF00328 Histidine phosphatase superfamily (branch 2) D5F51_11000 PF00483 Nucleotidyl transferase D5F51_11010 PF00782 Dual specificity phosphatase, catalytic domain D5F51_11015 PF12147 Putative methyltransferase D5F51_11015 PF12146 Serine aminopeptidase, S33 D5F51_11030 PF01066 CDP-alcohol phosphatidyltransferase D5F51_11040 PF00196 Bacterial regulatory proteins, luxR family D5F51_11040 PF00072 Response regulator receiver domain D5F51_11065 PF06167 Glucose-regulated metallo-peptidase M90 D5F51_11075 PF00589 Phage integrase family D5F51_11075 PF13356 Arm DNA-binding domain D5F51_11080 PF00005 ABC transporter D5F51_11095 PF00872 Transposase, Mutator family D5F51_11110 PF07690 Major Facilitator Superfamily D5F51_11115 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D5F51_11120 PF00248 Aldo/keto reductase family D5F51_11125 PF00072 Response regulator receiver domain D5F51_11125 PF00486 Transcriptional regulatory protein, C terminal D5F51_11130 PF00512 His Kinase A (phospho-acceptor) domain D5F51_11130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_11130 PF00672 HAMP domain D5F51_11155 PF00701 Dihydrodipicolinate synthetase family D5F51_11165 PF08671 Anti-repressor SinI D5F51_11165 PF01381 Helix-turn-helix D5F51_11180 PF00248 Aldo/keto reductase family D5F51_11185 PF00248 Aldo/keto reductase family D5F51_11190 PF03466 LysR substrate binding domain D5F51_11190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_11195 PF13460 NAD(P)H-binding D5F51_11195 PF11066 Protein of unknown function (DUF2867) D5F51_11205 PF00196 Bacterial regulatory proteins, luxR family D5F51_11205 PF00072 Response regulator receiver domain D5F51_11210 PF00512 His Kinase A (phospho-acceptor) domain D5F51_11210 PF01627 Hpt domain D5F51_11210 PF00989 PAS fold D5F51_11210 PF00072 Response regulator receiver domain D5F51_11210 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_11210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_11220 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_11220 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_11225 PF13954 PapC N-terminal domain D5F51_11225 PF00577 Outer membrane usher protein D5F51_11225 PF13953 PapC C-terminal domain D5F51_11235 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_11235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_11270 PF17837 4'-phosphopantetheinyl transferase N-terminal domain D5F51_11270 PF01648 4'-phosphopantetheinyl transferase superfamily D5F51_11275 PF03480 Bacterial extracellular solute-binding protein, family 7 D5F51_11285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5F51_11290 PF00939 Sodium:sulfate symporter transmembrane region D5F51_11295 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase D5F51_11300 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase D5F51_11300 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase D5F51_11305 PF04223 Citrate lyase, alpha subunit (CitF) D5F51_11310 PF03328 HpcH/HpaI aldolase/citrate lyase family D5F51_11315 PF06857 Malonate decarboxylase delta subunit (MdcD) D5F51_11320 PF08218 Citrate lyase ligase C-terminal domain D5F51_11325 PF00989 PAS fold D5F51_11325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_11325 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D5F51_11325 PF17203 Single cache domain 3 D5F51_11330 PF00072 Response regulator receiver domain D5F51_11330 PF12431 Transcriptional regulator D5F51_11335 PF00196 Bacterial regulatory proteins, luxR family D5F51_11335 PF00072 Response regulator receiver domain D5F51_11340 PF05231 MASE1 D5F51_11340 PF07730 Histidine kinase D5F51_11340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_11345 PF07690 Major Facilitator Superfamily D5F51_11355 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_11360 PF00005 ABC transporter D5F51_11360 PF08402 TOBE domain D5F51_11370 PF00072 Response regulator receiver domain D5F51_11370 PF01584 CheW-like domain D5F51_11375 PF01554 MatE D5F51_11380 PF00764 Arginosuccinate synthase D5F51_11385 PF02277 Phosphoribosyltransferase D5F51_11390 PF00300 Histidine phosphatase superfamily (branch 1) D5F51_11395 PF02654 Cobalamin-5-phosphate synthase D5F51_11400 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D5F51_11405 PF07685 CobB/CobQ-like glutamine amidotransferase domain D5F51_11410 PF00005 ABC transporter D5F51_11415 PF02361 Cobalt transport protein D5F51_11420 PF02553 Cobalt transport protein component CbiN D5F51_11425 PF01891 Cobalt uptake substrate-specific transmembrane region D5F51_11430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5F51_11435 PF06180 Cobalt chelatase (CbiK) D5F51_11440 PF02571 Precorrin-6x reductase CbiJ/CobK D5F51_11445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5F51_11450 PF11760 Cobalamin synthesis G N-terminal D5F51_11450 PF11761 Cobalamin biosynthesis central region D5F51_11450 PF01890 Cobalamin synthesis G C-terminus D5F51_11455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5F51_11460 PF05175 Methyltransferase small domain D5F51_11465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5F51_11470 PF01888 CbiD D5F51_11475 PF02570 Precorrin-8X methylmutase D5F51_11480 PF03186 CobD/Cbib protein D5F51_11485 PF07685 CobB/CobQ-like glutamine amidotransferase domain D5F51_11485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5F51_11490 PF10114 Sensory domain found in PocR D5F51_11490 PF12833 Helix-turn-helix domain D5F51_11495 PF00230 Major intrinsic protein D5F51_11500 PF00936 BMC domain D5F51_11505 PF00936 BMC domain D5F51_11510 PF02286 Dehydratase large subunit D5F51_11515 PF02288 Dehydratase medium subunit D5F51_11520 PF02287 Dehydratase small subunit D5F51_11525 PF08841 Diol dehydratase reactivase ATPase-like domain D5F51_11525 PF18427 DD-reactivating factor swiveling domain D5F51_11535 PF00936 BMC domain D5F51_11545 PF06130 Phosphate propanoyltransferase D5F51_11555 PF03319 Ethanolamine utilisation protein EutN/carboxysome D5F51_11560 PF01923 Cobalamin adenosyltransferase D5F51_11565 PF00171 Aldehyde dehydrogenase family D5F51_11570 PF00465 Iron-containing alcohol dehydrogenase D5F51_11575 PF10531 SLBB domain D5F51_11575 PF13375 RnfC Barrel sandwich hybrid domain D5F51_11575 PF13237 4Fe-4S dicluster domain D5F51_11575 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5F51_11585 PF00936 BMC domain D5F51_11590 PF10662 Ethanolamine utilisation - propanediol utilisation D5F51_11595 PF00871 Acetokinase family D5F51_11600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5F51_11600 PF10414 Sirohaem synthase dimerisation region D5F51_11600 PF14824 Sirohaem biosynthesis protein central D5F51_11605 PF00155 Aminotransferase class I and II D5F51_11610 PF00288 GHMP kinases N terminal domain D5F51_11615 PF13407 Periplasmic binding protein domain D5F51_11625 PF02653 Branched-chain amino acid transport system / permease component D5F51_11630 PF02653 Branched-chain amino acid transport system / permease component D5F51_11635 PF04363 Protein of unknown function (DUF496) D5F51_11640 PF04632 Fusaric acid resistance protein family D5F51_11645 PF00501 AMP-binding enzyme D5F51_11645 PF07993 Male sterility protein D5F51_11645 PF00550 Phosphopantetheine attachment site D5F51_11650 PF08411 Exonuclease C-terminal D5F51_11650 PF00929 Exonuclease D5F51_11655 PF13520 Amino acid permease D5F51_11665 PF00465 Iron-containing alcohol dehydrogenase D5F51_11670 PF00005 ABC transporter D5F51_11675 PF02653 Branched-chain amino acid transport system / permease component D5F51_11680 PF01370 NAD dependent epimerase/dehydratase family D5F51_11690 PF01634 ATP phosphoribosyltransferase D5F51_11690 PF08029 HisG, C-terminal domain D5F51_11695 PF00815 Histidinol dehydrogenase D5F51_11700 PF00155 Aminotransferase class I and II D5F51_11705 PF00475 Imidazoleglycerol-phosphate dehydratase D5F51_11710 PF00117 Glutamine amidotransferase class-I D5F51_11715 PF00977 Histidine biosynthesis protein D5F51_11720 PF00977 Histidine biosynthesis protein D5F51_11725 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D5F51_11725 PF01502 Phosphoribosyl-AMP cyclohydrolase D5F51_11730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5F51_11730 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D5F51_11735 PF00483 Nucleotidyl transferase D5F51_11740 PF00483 Nucleotidyl transferase D5F51_11755 PF16363 GDP-mannose 4,6 dehydratase D5F51_11760 PF16363 GDP-mannose 4,6 dehydratase D5F51_11775 PF13419 Haloacid dehalogenase-like hydrolase D5F51_11795 PF00534 Glycosyl transferases group 1 D5F51_11795 PF13439 Glycosyltransferase Family 4 D5F51_11805 PF00005 ABC transporter D5F51_11815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5F51_11815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5F51_11815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5F51_11815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5F51_11820 PF01050 Mannose-6-phosphate isomerase D5F51_11820 PF00483 Nucleotidyl transferase D5F51_11825 PF03471 Transporter associated domain D5F51_11825 PF00571 CBS domain D5F51_11825 PF03741 Integral membrane protein TerC family D5F51_11830 PF03606 C4-dicarboxylate anaerobic carrier D5F51_11835 PF05170 AsmA family D5F51_11840 PF00692 dUTPase D5F51_11845 PF00485 Phosphoribulokinase / Uridine kinase family D5F51_11850 PF10609 NUBPL iron-transfer P-loop NTPase D5F51_11855 PF01588 Putative tRNA binding domain D5F51_11855 PF09334 tRNA synthetases class I (M) D5F51_11875 PF07690 Major Facilitator Superfamily D5F51_11880 PF03788 LrgA family D5F51_11885 PF04172 LrgB-like family D5F51_11890 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D5F51_11890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D5F51_11895 PF00390 Malic enzyme, N-terminal domain D5F51_11895 PF03949 Malic enzyme, NAD binding domain D5F51_11905 PF02698 DUF218 domain D5F51_11910 PF01455 HupF/HypC family D5F51_11915 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D5F51_11920 PF12798 4Fe-4S binding domain D5F51_11920 PF00037 4Fe-4S binding domain D5F51_11925 PF00361 Proton-conducting membrane transporter D5F51_11930 PF00146 NADH dehydrogenase D5F51_11935 PF00361 Proton-conducting membrane transporter D5F51_11935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D5F51_11940 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D5F51_11945 PF00361 Proton-conducting membrane transporter D5F51_11945 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D5F51_11950 PF00374 Nickel-dependent hydrogenase D5F51_11950 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D5F51_11950 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D5F51_11955 PF12838 4Fe-4S dicluster domain D5F51_11960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D5F51_11965 PF07450 Formate hydrogenlyase maturation protein HycH D5F51_11970 PF01750 Hydrogenase maturation protease D5F51_11975 PF13247 4Fe-4S dicluster domain D5F51_11975 PF12800 4Fe-4S binding domain D5F51_11980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5F51_11980 PF01568 Molydopterin dinucleotide binding domain D5F51_11980 PF00384 Molybdopterin oxidoreductase D5F51_11985 PF01590 GAF domain D5F51_11985 PF02954 Bacterial regulatory protein, Fis family D5F51_11985 PF00158 Sigma-54 interaction domain D5F51_11990 PF01226 Formate/nitrite transporter D5F51_11995 PF02653 Branched-chain amino acid transport system / permease component D5F51_12000 PF00005 ABC transporter D5F51_12005 PF13407 Periplasmic binding protein domain D5F51_12010 PF00356 Bacterial regulatory proteins, lacI family D5F51_12015 PF04235 Protein of unknown function (DUF418) D5F51_12020 PF01227 GTP cyclohydrolase I D5F51_12025 PF06779 Uncharacterised MFS-type transporter YbfB D5F51_12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_12030 PF03466 LysR substrate binding domain D5F51_12035 PF08240 Alcohol dehydrogenase GroES-like domain D5F51_12035 PF00107 Zinc-binding dehydrogenase D5F51_12040 PF00756 Putative esterase D5F51_12055 PF13533 Biotin-lipoyl like D5F51_12060 PF00005 ABC transporter D5F51_12060 PF02687 FtsX-like permease family D5F51_12060 PF12704 MacB-like periplasmic core domain D5F51_12070 PF00083 Sugar (and other) transporter D5F51_12080 PF00994 Probable molybdopterin binding domain D5F51_12080 PF03454 MoeA C-terminal region (domain IV) D5F51_12080 PF03453 MoeA N-terminal region (domain I and II) D5F51_12085 PF00899 ThiF family D5F51_12090 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D5F51_12090 PF18416 N-acetylglucosamine binding protein domain 2 D5F51_12095 PF12848 ABC transporter D5F51_12095 PF00005 ABC transporter D5F51_12115 PF13505 Outer membrane protein beta-barrel domain D5F51_12120 PF00892 EamA-like transporter family D5F51_12130 PF02469 Fasciclin domain D5F51_12145 PF13847 Methyltransferase domain D5F51_12150 PF00210 Ferritin-like domain D5F51_12155 PF01258 Prokaryotic dksA/traR C4-type zinc finger D5F51_12160 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_12165 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_12170 PF00005 ABC transporter D5F51_12175 PF13426 PAS domain D5F51_12175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_12175 PF08447 PAS fold D5F51_12180 PF05971 RNA methyltransferase D5F51_12185 PF01613 Flavin reductase like domain D5F51_12200 PF02885 Glycosyl transferase family, helical bundle domain D5F51_12205 PF00230 Major intrinsic protein D5F51_12210 PF13307 Helicase C-terminal domain D5F51_12210 PF06733 DEAD_2 D5F51_12215 PF00267 Gram-negative porin D5F51_12225 PF00892 EamA-like transporter family D5F51_12245 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_12250 PF00005 ABC transporter D5F51_12255 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_12260 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5F51_12270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5F51_12270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5F51_12275 PF00581 Rhodanese-like domain D5F51_12280 PF00005 ABC transporter D5F51_12285 PF00005 ABC transporter D5F51_12290 PF02653 Branched-chain amino acid transport system / permease component D5F51_12295 PF02653 Branched-chain amino acid transport system / permease component D5F51_12305 PF07308 Protein of unknown function (DUF1456) D5F51_12310 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_12330 PF04226 Transglycosylase associated protein D5F51_12340 PF01844 HNH endonuclease D5F51_12345 PF01928 CYTH domain D5F51_12350 PF09330 D-lactate dehydrogenase, membrane binding D5F51_12350 PF01565 FAD binding domain D5F51_12355 PF00768 D-alanyl-D-alanine carboxypeptidase D5F51_12365 PF03448 MgtE intracellular N domain D5F51_12365 PF01769 Divalent cation transporter D5F51_12365 PF00571 CBS domain D5F51_12375 PF01207 Dihydrouridine synthase (Dus) D5F51_12380 PF00270 DEAD/DEAH box helicase D5F51_12380 PF00271 Helicase conserved C-terminal domain D5F51_12385 PF09209 Tetracyclin repressor-like, C-terminal domain D5F51_12385 PF00440 Bacterial regulatory proteins, tetR family D5F51_12390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5F51_12395 PF00005 ABC transporter D5F51_12410 PF01027 Inhibitor of apoptosis-promoting Bax1 D5F51_12415 PF02391 MoaE protein D5F51_12420 PF02597 ThiS family D5F51_12425 PF01967 MoaC family D5F51_12430 PF04055 Radical SAM superfamily D5F51_12430 PF06463 Molybdenum Cofactor Synthesis C D5F51_12435 PF01933 Uncharacterised protein family UPF0052 D5F51_12440 PF09905 DNA-binding protein VF530 D5F51_12445 PF17757 UvrB interaction domain D5F51_12445 PF02151 UvrB/uvrC motif D5F51_12445 PF04851 Type III restriction enzyme, res subunit D5F51_12445 PF00271 Helicase conserved C-terminal domain D5F51_12445 PF12344 Ultra-violet resistance protein B D5F51_12450 PF00005 ABC transporter D5F51_12460 PF08241 Methyltransferase domain D5F51_12465 PF00155 Aminotransferase class I and II D5F51_12470 PF06968 Biotin and Thiamin Synthesis associated domain D5F51_12470 PF04055 Radical SAM superfamily D5F51_12475 PF00202 Aminotransferase class-III D5F51_12480 PF10282 Lactonase, 7-bladed beta-propeller D5F51_12485 PF03797 Autotransporter beta-domain D5F51_12500 PF03459 TOBE domain D5F51_12500 PF00005 ABC transporter D5F51_12505 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_12515 PF10766 Multidrug efflux pump-associated protein AcrZ D5F51_12525 PF03459 TOBE domain D5F51_12525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_12530 PF00005 ABC transporter D5F51_12540 PF16363 GDP-mannose 4,6 dehydratase D5F51_12545 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D5F51_12545 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D5F51_12550 PF10509 Galactokinase galactose-binding signature D5F51_12550 PF00288 GHMP kinases N terminal domain D5F51_12550 PF08544 GHMP kinases C terminal D5F51_12555 PF01263 Aldose 1-epimerase D5F51_12565 PF00300 Histidine phosphatase superfamily (branch 1) D5F51_12570 PF00793 DAHP synthetase I family D5F51_12575 PF01545 Cation efflux family D5F51_12580 PF04973 Nicotinamide mononucleotide transporter D5F51_12585 PF02445 Quinolinate synthetase A protein D5F51_12620 PF13174 Tetratricopeptide repeat D5F51_12620 PF16331 TolA binding protein trimerisation D5F51_12625 PF00691 OmpA family D5F51_12630 PF07676 WD40-like Beta Propeller Repeat D5F51_12630 PF04052 TolB amino-terminal domain D5F51_12635 PF06519 TolA C-terminal D5F51_12635 PF06519 TolA C-terminal D5F51_12640 PF02472 Biopolymer transport protein ExbD/TolR D5F51_12645 PF01618 MotA/TolQ/ExbB proton channel family D5F51_12650 PF03061 Thioesterase superfamily D5F51_12655 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) D5F51_12660 PF08173 Membrane bound YbgT-like protein D5F51_12665 PF02322 Cytochrome bd terminal oxidase subunit II D5F51_12670 PF01654 Cytochrome bd terminal oxidase subunit I D5F51_12675 PF00149 Calcineurin-like phosphoesterase D5F51_12675 PF02872 5'-nucleotidase, C-terminal domain D5F51_12680 PF00549 CoA-ligase D5F51_12680 PF02629 CoA binding domain D5F51_12685 PF00549 CoA-ligase D5F51_12685 PF08442 ATP-grasp domain D5F51_12690 PF00364 Biotin-requiring enzyme D5F51_12690 PF02817 e3 binding domain D5F51_12690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D5F51_12695 PF02779 Transketolase, pyrimidine binding domain D5F51_12695 PF16078 2-oxoglutarate dehydrogenase N-terminus D5F51_12695 PF00676 Dehydrogenase E1 component D5F51_12695 PF16870 2-oxoglutarate dehydrogenase C-terminal D5F51_12700 PF13085 2Fe-2S iron-sulfur cluster binding domain D5F51_12705 PF00890 FAD binding domain D5F51_12705 PF02910 Fumarate reductase flavoprotein C-term D5F51_12710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D5F51_12715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D5F51_12720 PF00285 Citrate synthase, C-terminal domain D5F51_12725 PF01470 Pyroglutamyl peptidase D5F51_12740 PF03746 LamB/YcsF family D5F51_12745 PF02626 Carboxyltransferase domain, subdomain A and B D5F51_12750 PF02682 Carboxyltransferase domain, subdomain C and D D5F51_12755 PF01784 NIF3 (NGG1p interacting factor 3) D5F51_12760 PF02112 cAMP phosphodiesterases class-II D5F51_12765 PF03441 FAD binding domain of DNA photolyase D5F51_12765 PF00875 DNA photolyase D5F51_12770 PF08349 Protein of unknown function (DUF1722) D5F51_12775 PF10725 Protein of unknown function (DUF2517) D5F51_12785 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) D5F51_12790 PF03814 Potassium-transporting ATPase A subunit D5F51_12800 PF02669 K+-transporting ATPase, c chain D5F51_12805 PF13492 GAF domain D5F51_12805 PF13493 Domain of unknown function (DUF4118) D5F51_12805 PF02702 Osmosensitive K+ channel His kinase sensor domain D5F51_12805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_12805 PF00512 His Kinase A (phospho-acceptor) domain D5F51_12810 PF00486 Transcriptional regulatory protein, C terminal D5F51_12810 PF00072 Response regulator receiver domain D5F51_12820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5F51_12820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5F51_12820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5F51_12820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5F51_12825 PF17206 SeqA protein N-terminal domain D5F51_12825 PF03925 SeqA protein C-terminal domain D5F51_12830 PF12697 Alpha/beta hydrolase family D5F51_12835 PF01402 Ribbon-helix-helix protein, copG family D5F51_12840 PF02203 Tar ligand binding domain homologue D5F51_12840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_12840 PF00672 HAMP domain D5F51_12845 PF00258 Flavodoxin D5F51_12850 PF01475 Ferric uptake regulator family D5F51_12855 PF03173 Putative carbohydrate binding domain D5F51_12855 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain D5F51_12855 PF02838 Glycosyl hydrolase family 20, domain 2 D5F51_12855 PF00728 Glycosyl hydrolase family 20, catalytic domain D5F51_12860 PF13982 YbfN-like lipoprotein D5F51_12865 PF03573 outer membrane porin, OprD family D5F51_12870 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D5F51_12870 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5F51_12875 PF02378 Phosphotransferase system, EIIC D5F51_12875 PF00367 phosphotransferase system, EIIB D5F51_12875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D5F51_12880 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D5F51_12885 PF01979 Amidohydrolase family D5F51_12890 PF01047 MarR family D5F51_12890 PF00480 ROK family D5F51_12895 PF13344 Haloacid dehalogenase-like hydrolase D5F51_12900 PF13537 Glutamine amidotransferase domain D5F51_12900 PF00733 Asparagine synthase D5F51_12935 PF01494 FAD binding domain D5F51_12940 PF00919 Uncharacterized protein family UPF0004 D5F51_12940 PF01938 TRAM domain D5F51_12940 PF04055 Radical SAM superfamily D5F51_12945 PF02562 PhoH-like protein D5F51_12950 PF02130 Uncharacterized protein family UPF0054 D5F51_12955 PF00571 CBS domain D5F51_12955 PF03471 Transporter associated domain D5F51_12960 PF00795 Carbon-nitrogen hydrolase D5F51_12970 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_12975 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_12980 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_12985 PF00005 ABC transporter D5F51_12990 PF01156 Inosine-uridine preferring nucleoside hydrolase D5F51_12995 PF07295 Zinc-ribbon containing domain D5F51_13000 PF08264 Anticodon-binding domain of tRNA D5F51_13000 PF00133 tRNA synthetases class I (I, L, M and V) D5F51_13000 PF13603 Leucyl-tRNA synthetase, Domain 2 D5F51_13005 PF04390 Lipopolysaccharide-assembly D5F51_13010 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D5F51_13010 PF06144 DNA polymerase III, delta subunit D5F51_13015 PF01467 Cytidylyltransferase-like D5F51_13025 PF02590 Predicted SPOUT methyltransferase D5F51_13030 PF03717 Penicillin-binding Protein dimerisation domain D5F51_13030 PF00905 Penicillin binding protein transpeptidase domain D5F51_13035 PF01098 Cell cycle protein D5F51_13040 PF03330 Lytic transglycolase D5F51_13040 PF05036 Sporulation related domain D5F51_13045 PF00768 D-alanyl-D-alanine carboxypeptidase D5F51_13045 PF07943 Penicillin-binding protein 5, C-terminal domain D5F51_13050 PF04359 Protein of unknown function (DUF493) D5F51_13055 PF03099 Biotin/lipoate A/B protein ligase family D5F51_13060 PF04055 Radical SAM superfamily D5F51_13060 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D5F51_13065 PF02416 mttA/Hcf106 family D5F51_13070 PF05230 MASE2 domain D5F51_13070 PF00990 Diguanylate cyclase, GGDEF domain D5F51_13075 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D5F51_13080 PF00313 'Cold-shock' DNA-binding domain D5F51_13085 PF00313 'Cold-shock' DNA-binding domain D5F51_13090 PF00196 Bacterial regulatory proteins, luxR family D5F51_13100 PF00149 Calcineurin-like phosphoesterase D5F51_13105 PF03459 TOBE domain D5F51_13120 PF00664 ABC transporter transmembrane region D5F51_13120 PF00005 ABC transporter D5F51_13125 PF08007 Cupin superfamily protein D5F51_13130 PF01740 STAS domain D5F51_13130 PF00916 Sulfate permease family D5F51_13135 PF00194 Eukaryotic-type carbonic anhydrase D5F51_13140 PF07979 Intimin C-type lectin domain D5F51_13140 PF02369 Bacterial Ig-like domain (group 1) D5F51_13140 PF11924 Inverse autotransporter, beta-domain D5F51_13140 PF09134 Invasin, domain 3 D5F51_13175 PF00550 Phosphopantetheine attachment site D5F51_13185 PF06511 Type III secretion systems tip complex components D5F51_13195 PF04888 Secretion system effector C (SseC) like family D5F51_13195 PF16535 Type III cell invasion protein SipB D5F51_13200 PF07720 Tetratricopeptide repeat D5F51_13205 PF01312 FlhB HrpN YscU SpaS Family D5F51_13210 PF01311 Bacterial export proteins, family 1 D5F51_13215 PF01313 Bacterial export proteins, family 3 D5F51_13220 PF00813 FliP family D5F51_13240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5F51_13240 PF18269 T3SS EscN ATPase C-terminal domain D5F51_13240 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5F51_13250 PF00771 FHIPEP family D5F51_13255 PF07201 HrpJ-like domain D5F51_13275 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF D5F51_13285 PF01514 Secretory protein of YscJ/FliF family D5F51_13305 PF01464 Transglycosylase SLT domain D5F51_13405 PF00589 Phage integrase family D5F51_13415 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D5F51_13415 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D5F51_13425 PF09190 DALR domain D5F51_13425 PF01406 tRNA synthetases class I (C) catalytic domain D5F51_13430 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D5F51_13435 PF00149 Calcineurin-like phosphoesterase D5F51_13440 PF00731 AIR carboxylase D5F51_13445 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D5F51_13445 PF02222 ATP-grasp domain D5F51_13455 PF00005 ABC transporter D5F51_13460 PF13472 GDSL-like Lipase/Acylhydrolase family D5F51_13465 PF00106 short chain dehydrogenase D5F51_13470 PF00085 Thioredoxin D5F51_13475 PF16200 C-terminal region of band_7 D5F51_13475 PF01145 SPFH domain / Band 7 family D5F51_13480 PF01957 NfeD-like C-terminal, partner-binding D5F51_13485 PF13411 MerR HTH family regulatory protein D5F51_13490 PF00403 Heavy-metal-associated domain D5F51_13495 PF01963 TraB family D5F51_13500 PF04073 Aminoacyl-tRNA editing domain D5F51_13505 PF02872 5'-nucleotidase, C-terminal domain D5F51_13505 PF00149 Calcineurin-like phosphoesterase D5F51_13510 PF07690 Major Facilitator Superfamily D5F51_13515 PF00999 Sodium/hydrogen exchanger family D5F51_13515 PF02254 TrkA-N domain D5F51_13520 PF00294 pfkB family carbohydrate kinase D5F51_13525 PF16363 GDP-mannose 4,6 dehydratase D5F51_13530 PF13439 Glycosyltransferase Family 4 D5F51_13530 PF00534 Glycosyl transferases group 1 D5F51_13535 PF02719 Polysaccharide biosynthesis protein D5F51_13540 PF00953 Glycosyl transferase family 4 D5F51_13545 PF00534 Glycosyl transferases group 1 D5F51_13545 PF13439 Glycosyltransferase Family 4 D5F51_13550 PF13439 Glycosyltransferase Family 4 D5F51_13550 PF00534 Glycosyl transferases group 1 D5F51_13555 PF00535 Glycosyl transferase family 2 D5F51_13560 PF00535 Glycosyl transferase family 2 D5F51_13560 PF01501 Glycosyl transferase family 8 D5F51_13565 PF01943 Polysaccharide biosynthesis protein D5F51_13570 PF00762 Ferrochelatase D5F51_13575 PF05191 Adenylate kinase, active site lid D5F51_13580 PF00183 Hsp90 protein D5F51_13580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_13585 PF02132 RecR protein D5F51_13585 PF13662 Toprim domain D5F51_13590 PF02575 YbaB/EbfC DNA-binding family D5F51_13595 PF12169 DNA polymerase III subunits gamma and tau domain III D5F51_13595 PF12170 DNA polymerase III tau subunit V interacting with alpha D5F51_13595 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D5F51_13600 PF00156 Phosphoribosyl transferase domain D5F51_13605 PF04304 Protein of unknown function (DUF454) D5F51_13615 PF10689 Protein of unknown function (DUF2496) D5F51_13620 PF00924 Mechanosensitive ion channel D5F51_13620 PF12795 Mechanosensitive ion channel porin domain D5F51_13620 PF12794 Mechanosensitive ion channel inner membrane domain 1 D5F51_13625 PF02635 DsrE/DsrF-like family D5F51_13630 PF08361 MAATS-type transcriptional repressor, C-terminal region D5F51_13630 PF00440 Bacterial regulatory proteins, tetR family D5F51_13635 PF00529 HlyD membrane-fusion protein of T1SS D5F51_13635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5F51_13640 PF00873 AcrB/AcrD/AcrF family D5F51_13650 PF01168 Alanine racemase, N-terminal domain D5F51_13655 PF01676 Metalloenzyme superfamily D5F51_13660 PF01197 Ribosomal protein L31 D5F51_13665 PF00444 Ribosomal protein L36 D5F51_13670 PF01297 Zinc-uptake complex component A periplasmic D5F51_13675 PF00950 ABC 3 transport family D5F51_13680 PF00005 ABC transporter D5F51_13690 PF10757 Biofilm formation regulator YbaJ D5F51_13695 PF05321 Haemolysin expression modulating protein D5F51_13700 PF02369 Bacterial Ig-like domain (group 1) D5F51_13700 PF11924 Inverse autotransporter, beta-domain D5F51_13700 PF09134 Invasin, domain 3 D5F51_13710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D5F51_13715 PF09619 Type III secretion system lipoprotein chaperone (YscW) D5F51_13725 PF00909 Ammonium Transporter Family D5F51_13730 PF00543 Nitrogen regulatory protein P-II D5F51_13735 PF00005 ABC transporter D5F51_13735 PF00664 ABC transporter transmembrane region D5F51_13740 PF00664 ABC transporter transmembrane region D5F51_13740 PF00005 ABC transporter D5F51_13745 PF13404 AsnC-type helix-turn-helix domain D5F51_13745 PF01037 Lrp/AsnC ligand binding domain D5F51_13760 PF12793 Sugar transport-related sRNA regulator N-term D5F51_13760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_13765 PF06508 Queuosine biosynthesis protein QueC D5F51_13780 PF13145 PPIC-type PPIASE domain D5F51_13785 PF00216 Bacterial DNA-binding protein D5F51_13790 PF05362 Lon protease (S16) C-terminal proteolytic domain D5F51_13790 PF02190 ATP-dependent protease La (LON) substrate-binding domain D5F51_13790 PF00004 ATPase family associated with various cellular activities (AAA) D5F51_13795 PF10431 C-terminal, D2-small domain, of ClpB protein D5F51_13795 PF06689 ClpX C4-type zinc finger D5F51_13795 PF07724 AAA domain (Cdc48 subfamily) D5F51_13800 PF00574 Clp protease D5F51_13805 PF05697 Bacterial trigger factor protein (TF) D5F51_13805 PF05698 Bacterial trigger factor protein (TF) C-terminus D5F51_13805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5F51_13815 PF01722 BolA-like protein D5F51_13825 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D5F51_13825 PF03923 Uncharacterized lipoprotein D5F51_13830 PF07690 Major Facilitator Superfamily D5F51_13835 PF03502 Nucleoside-specific channel-forming protein, Tsx D5F51_13840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D5F51_13840 PF06481 COX Aromatic Rich Motif D5F51_13845 PF00115 Cytochrome C and Quinol oxidase polypeptide I D5F51_13850 PF00510 Cytochrome c oxidase subunit III D5F51_13855 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D5F51_13860 PF01040 UbiA prenyltransferase family D5F51_13865 PF07690 Major Facilitator Superfamily D5F51_13870 PF04461 Protein of unknown function (DUF520) D5F51_13875 PF08546 Ketopantoate reductase PanE/ApbA C terminal D5F51_13875 PF02558 Ketopantoate reductase PanE/ApbA D5F51_13880 PF01965 DJ-1/PfpI family D5F51_13885 PF07690 Major Facilitator Superfamily D5F51_13895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_13895 PF00512 His Kinase A (phospho-acceptor) domain D5F51_13895 PF00672 HAMP domain D5F51_13900 PF14532 Sigma-54 interaction domain D5F51_13900 PF00072 Response regulator receiver domain D5F51_13900 PF02954 Bacterial regulatory protein, Fis family D5F51_13905 PF02926 THUMP domain D5F51_13905 PF02568 Thiamine biosynthesis protein (ThiI) D5F51_13910 PF02609 Exonuclease VII small subunit D5F51_13915 PF00348 Polyprenyl synthetase D5F51_13920 PF02779 Transketolase, pyrimidine binding domain D5F51_13920 PF02780 Transketolase, C-terminal domain D5F51_13920 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D5F51_13925 PF04608 Phosphatidylglycerophosphatase A D5F51_13930 PF00586 AIR synthase related protein, N-terminal domain D5F51_13930 PF02769 AIR synthase related protein, C-terminal domain D5F51_13935 PF01029 NusB family D5F51_13940 PF00885 6,7-dimethyl-8-ribityllumazine synthase D5F51_13945 PF01872 RibD C-terminal domain D5F51_13945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D5F51_13950 PF03477 ATP cone domain D5F51_13960 PF07549 SecD/SecF GG Motif D5F51_13960 PF02355 Protein export membrane protein D5F51_13965 PF07549 SecD/SecF GG Motif D5F51_13965 PF13721 SecD export protein N-terminal TM region D5F51_13965 PF02355 Protein export membrane protein D5F51_13970 PF02699 Preprotein translocase subunit D5F51_13975 PF01702 Queuine tRNA-ribosyltransferase D5F51_13985 PF02547 Queuosine biosynthesis protein D5F51_13990 PF04336 Acyl carrier protein phosphodiesterase D5F51_13995 PF10417 C-terminal domain of 1-Cys peroxiredoxin D5F51_13995 PF00578 AhpC/TSA family D5F51_14010 PF02903 Alpha amylase, N-terminal ig-like domain D5F51_14010 PF00128 Alpha amylase, catalytic domain D5F51_14015 PF00324 Amino acid permease D5F51_14020 PF05525 Branched-chain amino acid transport protein D5F51_14025 PF12849 PBP superfamily domain D5F51_14030 PF00512 His Kinase A (phospho-acceptor) domain D5F51_14030 PF00989 PAS fold D5F51_14030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_14030 PF11808 Phosphate regulon sensor protein PhoR D5F51_14035 PF00486 Transcriptional regulatory protein, C terminal D5F51_14035 PF00072 Response regulator receiver domain D5F51_14040 PF12320 Type 5 capsule protein repressor C-terminal domain D5F51_14040 PF00149 Calcineurin-like phosphoesterase D5F51_14045 PF13476 AAA domain D5F51_14050 PF00480 ROK family D5F51_14055 PF04381 Putative exonuclease, RdgC D5F51_14060 PF06865 Pyrimidine/purine nucleoside phosphorylase D5F51_14065 PF01202 Shikimate kinase D5F51_14070 PF00593 TonB dependent receptor D5F51_14070 PF07715 TonB-dependent Receptor Plug Domain D5F51_14075 PF01497 Periplasmic binding protein D5F51_14090 PF08241 Methyltransferase domain D5F51_14105 PF07317 Flagellar regulator YcgR D5F51_14105 PF07238 PilZ domain D5F51_14110 PF02056 Family 4 glycosyl hydrolase D5F51_14110 PF11975 Family 4 glycosyl hydrolase C-terminal domain D5F51_14115 PF00367 phosphotransferase system, EIIB D5F51_14115 PF02378 Phosphotransferase system, EIIC D5F51_14125 PF00392 Bacterial regulatory proteins, gntR family D5F51_14125 PF07702 UTRA domain D5F51_14130 PF07662 Na+ dependent nucleoside transporter C-terminus D5F51_14130 PF01773 Na+ dependent nucleoside transporter N-terminus D5F51_14135 PF04227 Indigoidine synthase A like protein D5F51_14140 PF00294 pfkB family carbohydrate kinase D5F51_14145 PF00171 Aldehyde dehydrogenase family D5F51_14150 PF00696 Amino acid kinase family D5F51_14150 PF01472 PUA domain D5F51_14155 PF07417 Sigma factor-binding transcriptional regulator Crl D5F51_14165 PF00156 Phosphoribosyl transferase domain D5F51_14170 PF01546 Peptidase family M20/M25/M40 D5F51_14170 PF07687 Peptidase dimerisation domain D5F51_14175 PF00817 impB/mucB/samB family D5F51_14175 PF11798 IMS family HHH motif D5F51_14175 PF11799 impB/mucB/samB family C-terminal domain D5F51_14185 PF00291 Pyridoxal-phosphate dependent enzyme D5F51_14190 PF08348 YheO-like PAS domain D5F51_14190 PF13309 HTH domain D5F51_14195 PF07478 D-ala D-ala ligase C-terminus D5F51_14195 PF01820 D-ala D-ala ligase N-terminus D5F51_14205 PF03009 Glycerophosphoryl diester phosphodiesterase family D5F51_14220 PF04400 (Na+)-NQR maturation NqrM D5F51_14225 PF02424 ApbE family D5F51_14230 PF00175 Oxidoreductase NAD-binding domain D5F51_14230 PF00970 Oxidoreductase FAD-binding domain D5F51_14230 PF00111 2Fe-2S iron-sulfur cluster binding domain D5F51_14235 PF02508 Rnf-Nqr subunit, membrane protein D5F51_14240 PF02508 Rnf-Nqr subunit, membrane protein D5F51_14245 PF04205 FMN-binding domain D5F51_14250 PF03116 NQR2, RnfD, RnfE family D5F51_14255 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D5F51_14255 PF11973 NQRA C-terminal domain D5F51_14260 PF03734 L,D-transpeptidase catalytic domain D5F51_14265 PF13230 Glutamine amidotransferases class-II D5F51_14270 PF13580 SIS domain D5F51_14275 PF09317 Domain of unknown function (DUF1974) D5F51_14275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5F51_14275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5F51_14280 PF18254 HMW1 domain 2 D5F51_14280 PF18071 HMW1C N-terminal D5F51_14285 PF05860 haemagglutination activity domain D5F51_14290 PF08479 POTRA domain, ShlB-type D5F51_14290 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D5F51_14295 PF01636 Phosphotransferase enzyme family D5F51_14300 PF01008 Initiation factor 2 subunit family D5F51_14305 PF03079 ARD/ARD' family D5F51_14315 PF00596 Class II Aldolase and Adducin N-terminal domain D5F51_14320 PF01757 Acyltransferase family D5F51_14325 PF00872 Transposase, Mutator family D5F51_14340 PF07102 Protein of unknown function (DUF1364) D5F51_14380 PF12167 Arm DNA-binding domain D5F51_14380 PF00589 Phage integrase family D5F51_14385 PF00155 Aminotransferase class I and II D5F51_14390 PF00795 Carbon-nitrogen hydrolase D5F51_14395 PF01546 Peptidase family M20/M25/M40 D5F51_14395 PF07687 Peptidase dimerisation domain D5F51_14400 PF00266 Aminotransferase class-V D5F51_14405 PF00005 ABC transporter D5F51_14415 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_14420 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_14440 PF01425 Amidase D5F51_14450 PF01545 Cation efflux family D5F51_14450 PF16916 Dimerisation domain of Zinc Transporter D5F51_14460 PF07690 Major Facilitator Superfamily D5F51_14465 PF03591 AzlC protein D5F51_14470 PF05437 Branched-chain amino acid transport protein (AzlD) D5F51_14475 PF01047 MarR family D5F51_14480 PF02321 Outer membrane efflux protein D5F51_14485 PF00529 HlyD membrane-fusion protein of T1SS D5F51_14485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5F51_14490 PF07690 Major Facilitator Superfamily D5F51_14495 PF08032 RNA 2'-O ribose methyltransferase substrate binding D5F51_14495 PF00588 SpoU rRNA Methylase family D5F51_14500 PF00085 Thioredoxin D5F51_14510 PF00583 Acetyltransferase (GNAT) family D5F51_14510 PF13380 CoA binding domain D5F51_14510 PF13607 Succinyl-CoA ligase like flavodoxin domain D5F51_14515 PF13091 PLD-like domain D5F51_14520 PF10043 Predicted periplasmic lipoprotein (DUF2279) D5F51_14555 PF10431 C-terminal, D2-small domain, of ClpB protein D5F51_14555 PF02861 Clp amino terminal domain, pathogenicity island component D5F51_14555 PF17871 AAA lid domain D5F51_14555 PF07724 AAA domain (Cdc48 subfamily) D5F51_14555 PF00004 ATPase family associated with various cellular activities (AAA) D5F51_14565 PF00849 RNA pseudouridylate synthase D5F51_14565 PF01479 S4 domain D5F51_14575 PF13525 Outer membrane lipoprotein D5F51_14580 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D5F51_14585 PF00800 Prephenate dehydratase D5F51_14585 PF01817 Chorismate mutase type II D5F51_14590 PF02153 Prephenate dehydrogenase D5F51_14590 PF01817 Chorismate mutase type II D5F51_14595 PF00793 DAHP synthetase I family D5F51_14600 PF04397 LytTr DNA-binding domain D5F51_14600 PF00072 Response regulator receiver domain D5F51_14605 PF03605 Anaerobic c4-dicarboxylate membrane transporter D5F51_14610 PF04338 Protein of unknown function, DUF481 D5F51_14615 PF01245 Ribosomal protein L19 D5F51_14620 PF01746 tRNA (Guanine-1)-methyltransferase D5F51_14625 PF01782 RimM N-terminal domain D5F51_14625 PF05239 PRC-barrel domain D5F51_14630 PF00886 Ribosomal protein S16 D5F51_14635 PF02978 Signal peptide binding domain D5F51_14635 PF02881 SRP54-type protein, helical bundle domain D5F51_14635 PF00448 SRP54-type protein, GTPase domain D5F51_14640 PF01578 Cytochrome C assembly protein D5F51_14645 PF03471 Transporter associated domain D5F51_14645 PF00571 CBS domain D5F51_14645 PF01595 Cyclin M transmembrane N-terminal domain D5F51_14650 PF02664 S-Ribosylhomocysteinase (LuxS) D5F51_14655 PF04262 Glutamate-cysteine ligase D5F51_14660 PF09335 SNARE associated Golgi protein D5F51_14665 PF13419 Haloacid dehalogenase-like hydrolase D5F51_14695 PF02599 Global regulator protein family D5F51_14700 PF02272 DHHA1 domain D5F51_14700 PF01411 tRNA synthetases class II (A) D5F51_14700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D5F51_14705 PF02631 RecX family D5F51_14710 PF00154 recA bacterial DNA recombination protein D5F51_14715 PF02464 Competence-damaged protein D5F51_14720 PF07690 Major Facilitator Superfamily D5F51_14735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5F51_14735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5F51_14740 PF02780 Transketolase, C-terminal domain D5F51_14740 PF02779 Transketolase, pyrimidine binding domain D5F51_14745 PF00456 Transketolase, thiamine diphosphate binding domain D5F51_14750 PF02653 Branched-chain amino acid transport system / permease component D5F51_14755 PF00005 ABC transporter D5F51_14765 PF00356 Bacterial regulatory proteins, lacI family D5F51_14770 PF02613 Nitrate reductase delta subunit D5F51_14775 PF04976 DMSO reductase anchor subunit (DmsC) D5F51_14780 PF13247 4Fe-4S dicluster domain D5F51_14780 PF12800 4Fe-4S binding domain D5F51_14785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5F51_14785 PF00384 Molybdopterin oxidoreductase D5F51_14785 PF01568 Molydopterin dinucleotide binding domain D5F51_14790 PF00596 Class II Aldolase and Adducin N-terminal domain D5F51_14795 PF08220 DeoR-like helix-turn-helix domain D5F51_14795 PF00455 DeoR C terminal sensor domain D5F51_14805 PF00005 ABC transporter D5F51_14810 PF02653 Branched-chain amino acid transport system / permease component D5F51_14815 PF02653 Branched-chain amino acid transport system / permease component D5F51_14820 PF01261 Xylose isomerase-like TIM barrel D5F51_14825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5F51_14825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5F51_14830 PF05681 Fumarate hydratase (Fumerase) D5F51_14830 PF05683 Fumarase C-terminus D5F51_14835 PF13458 Periplasmic binding protein D5F51_14840 PF02653 Branched-chain amino acid transport system / permease component D5F51_14845 PF11862 Domain of unknown function (DUF3382) D5F51_14845 PF02653 Branched-chain amino acid transport system / permease component D5F51_14850 PF00005 ABC transporter D5F51_14855 PF00005 ABC transporter D5F51_14875 PF00795 Carbon-nitrogen hydrolase D5F51_14880 PF04198 Putative sugar-binding domain D5F51_14880 PF13936 Helix-turn-helix domain D5F51_14885 PF00106 short chain dehydrogenase D5F51_14890 PF03610 PTS system fructose IIA component D5F51_14895 PF03830 PTS system sorbose subfamily IIB component D5F51_14900 PF03609 PTS system sorbose-specific iic component D5F51_14905 PF03613 PTS system mannose/fructose/sorbose family IID component D5F51_14910 PF00107 Zinc-binding dehydrogenase D5F51_14910 PF08240 Alcohol dehydrogenase GroES-like domain D5F51_14915 PF01022 Bacterial regulatory protein, arsR family D5F51_14920 PF03764 Elongation factor G, domain IV D5F51_14920 PF00679 Elongation factor G C-terminus D5F51_14920 PF00009 Elongation factor Tu GTP binding domain D5F51_14920 PF14492 Elongation Factor G, domain II D5F51_14920 PF03144 Elongation factor Tu domain 2 D5F51_14925 PF02705 K+ potassium transporter D5F51_14945 PF00005 ABC transporter D5F51_14950 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_14955 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_14985 PF00291 Pyridoxal-phosphate dependent enzyme D5F51_14990 PF02447 GntP family permease D5F51_14995 PF03466 LysR substrate binding domain D5F51_14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_15000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5F51_15000 PF00005 ABC transporter D5F51_15005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5F51_15005 PF00005 ABC transporter D5F51_15015 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_15020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_15025 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5F51_15025 PF13378 Enolase C-terminal domain-like D5F51_15030 PF03150 Di-haem cytochrome c peroxidase D5F51_15030 PF00034 Cytochrome c D5F51_15030 PF14376 Haem-binding domain D5F51_15035 PF00155 Aminotransferase class I and II D5F51_15040 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_15060 PF02801 Beta-ketoacyl synthase, C-terminal domain D5F51_15060 PF00109 Beta-ketoacyl synthase, N-terminal domain D5F51_15065 PF02321 Outer membrane efflux protein D5F51_15070 PF02687 FtsX-like permease family D5F51_15070 PF00005 ABC transporter D5F51_15070 PF12704 MacB-like periplasmic core domain D5F51_15075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5F51_15080 PF03412 Peptidase C39 family D5F51_15080 PF00664 ABC transporter transmembrane region D5F51_15080 PF00005 ABC transporter D5F51_15090 PF00085 Thioredoxin D5F51_15090 PF01323 DSBA-like thioredoxin domain D5F51_15105 PF00419 Fimbrial protein D5F51_15110 PF00419 Fimbrial protein D5F51_15120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_15120 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_15125 PF13953 PapC C-terminal domain D5F51_15125 PF13954 PapC N-terminal domain D5F51_15125 PF00577 Outer membrane usher protein D5F51_15130 PF00419 Fimbrial protein D5F51_15135 PF00419 Fimbrial protein D5F51_15175 PF08479 POTRA domain, ShlB-type D5F51_15175 PF17287 POTRA domain D5F51_15175 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D5F51_15205 PF13332 Hemagglutinin repeat D5F51_15205 PF13018 Extended Signal Peptide of Type V secretion system D5F51_15205 PF05860 haemagglutination activity domain D5F51_15205 PF04829 Pre-toxin domain with VENN motif D5F51_15220 PF03783 Curli production assembly/transport component CsgG D5F51_15230 PF05643 Putative bacterial lipoprotein (DUF799) D5F51_15245 PF13953 PapC C-terminal domain D5F51_15245 PF13954 PapC N-terminal domain D5F51_15245 PF00577 Outer membrane usher protein D5F51_15250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_15250 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_15255 PF00419 Fimbrial protein D5F51_15260 PF03831 PhnA domain D5F51_15260 PF08274 PhnA Zinc-Ribbon D5F51_15270 PF03551 Transcriptional regulator PadR-like family D5F51_15280 PF00232 Glycosyl hydrolase family 1 D5F51_15290 PF00356 Bacterial regulatory proteins, lacI family D5F51_15295 PF04264 YceI-like domain D5F51_15300 PF01292 Prokaryotic cytochrome b561 D5F51_15305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5F51_15320 PF00005 ABC transporter D5F51_15325 PF02405 Permease MlaE D5F51_15330 PF07690 Major Facilitator Superfamily D5F51_15340 PF07969 Amidohydrolase family D5F51_15345 PF00324 Amino acid permease D5F51_15350 PF13406 Transglycosylase SLT domain D5F51_15360 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_15365 PF00005 ABC transporter D5F51_15370 PF01810 LysE type translocator D5F51_15380 PF04966 Carbohydrate-selective porin, OprB family D5F51_15385 PF00232 Glycosyl hydrolase family 1 D5F51_15390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D5F51_15390 PF02378 Phosphotransferase system, EIIC D5F51_15390 PF00367 phosphotransferase system, EIIB D5F51_15395 PF03123 CAT RNA binding domain D5F51_15395 PF00874 PRD domain D5F51_15400 PF00384 Molybdopterin oxidoreductase D5F51_15400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5F51_15400 PF01568 Molydopterin dinucleotide binding domain D5F51_15405 PF13247 4Fe-4S dicluster domain D5F51_15405 PF12800 4Fe-4S binding domain D5F51_15410 PF04976 DMSO reductase anchor subunit (DmsC) D5F51_15415 PF02613 Nitrate reductase delta subunit D5F51_15435 PF01292 Prokaryotic cytochrome b561 D5F51_15440 PF00155 Aminotransferase class I and II D5F51_15450 PF07350 Protein of unknown function (DUF1479) D5F51_15455 PF06580 Histidine kinase D5F51_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_15455 PF07694 5TMR of 5TMR-LYT D5F51_15460 PF00072 Response regulator receiver domain D5F51_15460 PF04397 LytTr DNA-binding domain D5F51_15465 PF07690 Major Facilitator Superfamily D5F51_15470 PF02685 Glucokinase D5F51_15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_15480 PF03466 LysR substrate binding domain D5F51_15485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5F51_15485 PF00205 Thiamine pyrophosphate enzyme, central domain D5F51_15485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5F51_15490 PF00248 Aldo/keto reductase family D5F51_15500 PF01566 Natural resistance-associated macrophage protein D5F51_15505 PF01773 Na+ dependent nucleoside transporter N-terminus D5F51_15505 PF07670 Nucleoside recognition D5F51_15505 PF07662 Na+ dependent nucleoside transporter C-terminus D5F51_15530 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5F51_15560 PF12843 Putative quorum-sensing-regulated virulence factor D5F51_15565 PF01653 NAD-dependent DNA ligase adenylation domain D5F51_15565 PF12826 Helix-hairpin-helix motif D5F51_15565 PF03120 NAD-dependent DNA ligase OB-fold domain D5F51_15565 PF00533 BRCA1 C Terminus (BRCT) domain D5F51_15565 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D5F51_15570 PF04354 ZipA, C-terminal FtsZ-binding domain D5F51_15580 PF00291 Pyridoxal-phosphate dependent enzyme D5F51_15585 PF00381 PTS HPr component phosphorylation site D5F51_15590 PF00391 PEP-utilising enzyme, mobile domain D5F51_15590 PF02896 PEP-utilising enzyme, TIM barrel domain D5F51_15590 PF05524 PEP-utilising enzyme, N-terminal D5F51_15595 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D5F51_15600 PF00672 HAMP domain D5F51_15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_15600 PF00512 His Kinase A (phospho-acceptor) domain D5F51_15600 PF16527 Two-component sensor protein CpxA, periplasmic domain D5F51_15605 PF00486 Transcriptional regulatory protein, C terminal D5F51_15605 PF00072 Response regulator receiver domain D5F51_15610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5F51_15615 PF12704 MacB-like periplasmic core domain D5F51_15615 PF02687 FtsX-like permease family D5F51_15615 PF00005 ABC transporter D5F51_15620 PF00291 Pyridoxal-phosphate dependent enzyme D5F51_15625 PF00005 ABC transporter D5F51_15630 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_15635 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_15645 PF07690 Major Facilitator Superfamily D5F51_15650 PF01380 SIS domain D5F51_15650 PF01418 Helix-turn-helix domain, rpiR family D5F51_15655 PF04074 YhcH/YjgK/YiaL D5F51_15660 PF00480 ROK family D5F51_15665 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase D5F51_15670 PF00701 Dihydrodipicolinate synthetase family D5F51_15675 PF04261 Dyp-type peroxidase family D5F51_15680 PF06572 Protein of unknown function (DUF1131) D5F51_15685 PF04076 Bacterial OB fold (BOF) protein D5F51_15700 PF00581 Rhodanese-like domain D5F51_15705 PF00248 Aldo/keto reductase family D5F51_15710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5F51_15710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5F51_15720 PF02653 Branched-chain amino acid transport system / permease component D5F51_15725 PF00005 ABC transporter D5F51_15730 PF13407 Periplasmic binding protein domain D5F51_15735 PF00583 Acetyltransferase (GNAT) family D5F51_15740 PF01218 Coproporphyrinogen III oxidase D5F51_15745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D5F51_15750 PF03949 Malic enzyme, NAD binding domain D5F51_15750 PF01515 Phosphate acetyl/butaryl transferase D5F51_15750 PF00390 Malic enzyme, N-terminal domain D5F51_15755 PF00293 NUDIX domain D5F51_15760 PF03264 NapC/NirT cytochrome c family, N-terminal region D5F51_15765 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D5F51_15770 PF00384 Molybdopterin oxidoreductase D5F51_15770 PF01568 Molydopterin dinucleotide binding domain D5F51_15770 PF10518 TAT (twin-arginine translocation) pathway signal sequence D5F51_15770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5F51_15775 PF03927 NapD protein D5F51_15785 PF00072 Response regulator receiver domain D5F51_15785 PF00196 Bacterial regulatory proteins, luxR family D5F51_15795 PF00873 AcrB/AcrD/AcrF family D5F51_15805 PF03960 ArsC family D5F51_15810 PF01546 Peptidase family M20/M25/M40 D5F51_15810 PF07687 Peptidase dimerisation domain D5F51_15815 PF02557 D-alanyl-D-alanine carboxypeptidase D5F51_15820 PF13980 Uncharacterised protein family (UPF0370) D5F51_15825 PF02230 Phospholipase/Carboxylesterase D5F51_15830 PF13718 GNAT acetyltransferase 2 D5F51_15830 PF05127 Helicase D5F51_15830 PF17176 tRNA-binding domain D5F51_15835 PF04284 Protein of unknown function (DUF441) D5F51_15840 PF04228 Putative neutral zinc metallopeptidase D5F51_15845 PF01259 SAICAR synthetase D5F51_15850 PF06804 NlpB/DapX lipoprotein D5F51_15855 PF00701 Dihydrodipicolinate synthetase family D5F51_15860 PF01842 ACT domain D5F51_15865 PF00578 AhpC/TSA family D5F51_15870 PF01594 AI-2E family transporter D5F51_15875 PF07720 Tetratricopeptide repeat D5F51_15875 PF01435 Peptidase family M48 D5F51_15880 PF03960 ArsC family D5F51_15885 PF00308 Bacterial dnaA protein D5F51_15890 PF00860 Permease family D5F51_15900 PF00586 AIR synthase related protein, N-terminal domain D5F51_15900 PF02769 AIR synthase related protein, C-terminal domain D5F51_15905 PF00551 Formyl transferase D5F51_15910 PF13302 Acetyltransferase (GNAT) domain D5F51_15915 PF00005 ABC transporter D5F51_15920 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_15925 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_15930 PF17941 Polyphosphate kinase C-terminal domain 1 D5F51_15930 PF13089 Polyphosphate kinase N-terminal domain D5F51_15930 PF02503 Polyphosphate kinase middle domain D5F51_15930 PF13090 Polyphosphate kinase C-terminal domain 2 D5F51_15935 PF02541 Ppx/GppA phosphatase family D5F51_15945 PF03448 MgtE intracellular N domain D5F51_15945 PF00571 CBS domain D5F51_15945 PF01769 Divalent cation transporter D5F51_15950 PF13426 PAS domain D5F51_15950 PF00563 EAL domain D5F51_15950 PF08448 PAS fold D5F51_15950 PF08447 PAS fold D5F51_15950 PF00990 Diguanylate cyclase, GGDEF domain D5F51_15950 PF05231 MASE1 D5F51_15955 PF00012 Hsp70 protein D5F51_15965 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_15965 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_15970 PF13954 PapC N-terminal domain D5F51_15970 PF13953 PapC C-terminal domain D5F51_15970 PF00577 Outer membrane usher protein D5F51_15980 PF13533 Biotin-lipoyl like D5F51_15985 PF00873 AcrB/AcrD/AcrF family D5F51_15990 PF00873 AcrB/AcrD/AcrF family D5F51_15995 PF07690 Major Facilitator Superfamily D5F51_16000 PF00672 HAMP domain D5F51_16000 PF00512 His Kinase A (phospho-acceptor) domain D5F51_16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_16005 PF00486 Transcriptional regulatory protein, C terminal D5F51_16005 PF00072 Response regulator receiver domain D5F51_16010 PF07411 Domain of unknown function (DUF1508) D5F51_16020 PF00781 Diacylglycerol kinase catalytic domain D5F51_16025 PF03608 PTS system enzyme II sorbitol-specific factor D5F51_16030 PF03612 Sorbitol phosphotransferase enzyme II N-terminus D5F51_16030 PF07663 Sorbitol phosphotransferase enzyme II C-terminus D5F51_16035 PF03829 PTS system glucitol/sorbitol-specific IIA component D5F51_16040 PF00106 short chain dehydrogenase D5F51_16045 PF06923 Glucitol operon activator protein (GutM) D5F51_16050 PF00455 DeoR C terminal sensor domain D5F51_16050 PF08220 DeoR-like helix-turn-helix domain D5F51_16055 PF00571 CBS domain D5F51_16055 PF01380 SIS domain D5F51_16075 PF08543 Phosphomethylpyrimidine kinase D5F51_16090 PF00958 GMP synthase C terminal domain D5F51_16090 PF00117 Glutamine amidotransferase class-I D5F51_16090 PF02540 NAD synthase D5F51_16095 PF00571 CBS domain D5F51_16095 PF00478 IMP dehydrogenase / GMP reductase domain D5F51_16100 PF02601 Exonuclease VII, large subunit D5F51_16100 PF13742 OB-fold nucleic acid binding domain D5F51_16105 PF07191 zinc-ribbons D5F51_16115 PF01926 50S ribosome-binding GTPase D5F51_16115 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D5F51_16120 PF13360 PQQ-like domain D5F51_16125 PF09976 Tetratricopeptide repeat-like domain D5F51_16130 PF03129 Anticodon binding domain D5F51_16130 PF13393 Histidyl-tRNA synthetase D5F51_16135 PF04551 GcpE protein D5F51_16140 PF13464 Domain of unknown function (DUF4115) D5F51_16150 PF04055 Radical SAM superfamily D5F51_16155 PF00334 Nucleoside diphosphate kinase D5F51_16165 PF06832 Penicillin-Binding Protein C-terminus Family D5F51_16165 PF00912 Transglycosylase D5F51_16165 PF00905 Penicillin binding protein transpeptidase domain D5F51_16170 PF00207 Alpha-2-macroglobulin family D5F51_16170 PF07703 Alpha-2-macroglobulin bait region domain D5F51_16170 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain D5F51_16170 PF07678 A-macroglobulin TED domain D5F51_16170 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D5F51_16170 PF11974 Bacterial alpha-2-macroglobulin MG3 domain D5F51_16170 PF01835 MG2 domain D5F51_16170 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain D5F51_16170 PF17962 Bacterial macroglobulin domain 6 D5F51_16185 PF14581 SseB protein C-terminal domain D5F51_16185 PF07179 SseB protein N-terminal domain D5F51_16190 PF00883 Cytosol aminopeptidase family, catalytic domain D5F51_16190 PF12404 Peptidase D5F51_16195 PF04384 Iron-sulphur cluster assembly D5F51_16200 PF00111 2Fe-2S iron-sulfur cluster binding domain D5F51_16205 PF00012 Hsp70 protein D5F51_16210 PF07743 HSCB C-terminal oligomerisation domain D5F51_16210 PF00226 DnaJ domain D5F51_16220 PF01521 Iron-sulphur cluster biosynthesis D5F51_16225 PF01592 NifU-like N terminal domain D5F51_16230 PF00266 Aminotransferase class-V D5F51_16235 PF02082 Transcriptional regulator D5F51_16240 PF00588 SpoU rRNA Methylase family D5F51_16245 PF00459 Inositol monophosphatase family D5F51_16250 PF03824 High-affinity nickel-transport protein D5F51_16255 PF06226 Protein of unknown function (DUF1007) D5F51_16260 PF00874 PRD domain D5F51_16265 PF12832 MFS_1 like family D5F51_16270 PF00464 Serine hydroxymethyltransferase D5F51_16275 PF00175 Oxidoreductase NAD-binding domain D5F51_16275 PF00042 Globin D5F51_16275 PF00970 Oxidoreductase FAD-binding domain D5F51_16280 PF14502 Helix-turn-helix domain D5F51_16280 PF14503 YhfZ C-terminal domain D5F51_16290 PF01168 Alanine racemase, N-terminal domain D5F51_16295 PF02126 Phosphotriesterase family D5F51_16300 PF10941 Protein of unknown function DUF2620 D5F51_16305 PF10797 Protein of unknown function D5F51_16310 PF00543 Nitrogen regulatory protein P-II D5F51_16315 PF00795 Carbon-nitrogen hydrolase D5F51_16315 PF02540 NAD synthase D5F51_16320 PF00158 Sigma-54 interaction domain D5F51_16320 PF00072 Response regulator receiver domain D5F51_16325 PF13942 YfhG lipoprotein D5F51_16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_16330 PF00512 His Kinase A (phospho-acceptor) domain D5F51_16345 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D5F51_16345 PF02769 AIR synthase related protein, C-terminal domain D5F51_16345 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D5F51_16350 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_16350 PF01464 Transglycosylase SLT domain D5F51_16355 PF14437 MafB19-like deaminase D5F51_16370 PF01380 SIS domain D5F51_16375 PF01380 SIS domain D5F51_16375 PF01418 Helix-turn-helix domain, rpiR family D5F51_16380 PF12838 4Fe-4S dicluster domain D5F51_16385 PF02447 GntP family permease D5F51_16390 PF01648 4'-phosphopantetheinyl transferase superfamily D5F51_16395 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D5F51_16400 PF11967 Recombination protein O N terminal D5F51_16400 PF02565 Recombination protein O C terminal D5F51_16405 PF07650 KH domain D5F51_16405 PF01926 50S ribosome-binding GTPase D5F51_16410 PF00035 Double-stranded RNA binding motif D5F51_16410 PF14622 Ribonuclease-III-like D5F51_16415 PF10502 Signal peptidase, peptidase S26 D5F51_16420 PF06421 GTP-binding protein LepA C-terminus D5F51_16420 PF00009 Elongation factor Tu GTP binding domain D5F51_16420 PF00679 Elongation factor G C-terminus D5F51_16420 PF03144 Elongation factor Tu domain 2 D5F51_16435 PF03888 MucB/RseB N-terminal domain D5F51_16435 PF17188 MucB/RseB C-terminal domain D5F51_16440 PF03872 Anti sigma-E protein RseA, N-terminal domain D5F51_16440 PF03873 Anti sigma-E protein RseA, C-terminal domain D5F51_16445 PF08281 Sigma-70, region 4 D5F51_16445 PF04542 Sigma-70 region 2 D5F51_16450 PF02910 Fumarate reductase flavoprotein C-term D5F51_16450 PF00890 FAD binding domain D5F51_16455 PF05175 Methyltransferase small domain D5F51_16460 PF00271 Helicase conserved C-terminal domain D5F51_16460 PF00270 DEAD/DEAH box helicase D5F51_16465 PF12796 Ankyrin repeats (3 copies) D5F51_16475 PF01228 Glycine radical D5F51_16480 PF03167 Uracil DNA glycosylase superfamily D5F51_16485 PF01025 GrpE D5F51_16490 PF01513 ATP-NAD kinase D5F51_16495 PF02463 RecF/RecN/SMC N terminal domain D5F51_16500 PF04355 SmpA / OmlA family D5F51_16505 PF03658 RnfH family Ubiquitin D5F51_16510 PF03364 Polyketide cyclase / dehydrase and lipid transport D5F51_16515 PF01668 SmpB protein D5F51_16525 PF13356 Arm DNA-binding domain D5F51_16525 PF00589 Phage integrase family D5F51_16530 PF00145 C-5 cytosine-specific DNA methylase D5F51_16640 PF13954 PapC N-terminal domain D5F51_16640 PF00577 Outer membrane usher protein D5F51_16640 PF13953 PapC C-terminal domain D5F51_16645 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_16645 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_16650 PF16970 Type-1 fimbrial protein, A D5F51_16655 PF00004 ATPase family associated with various cellular activities (AAA) D5F51_16655 PF10431 C-terminal, D2-small domain, of ClpB protein D5F51_16655 PF17871 AAA lid domain D5F51_16655 PF07724 AAA domain (Cdc48 subfamily) D5F51_16705 PF00196 Bacterial regulatory proteins, luxR family D5F51_16715 PF04794 YdjC-like protein D5F51_16720 PF12833 Helix-turn-helix domain D5F51_16720 PF07883 Cupin domain D5F51_16725 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D5F51_16730 PF00232 Glycosyl hydrolase family 1 D5F51_16735 PF02378 Phosphotransferase system, EIIC D5F51_16740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D5F51_16745 PF07995 Glucose / Sorbosone dehydrogenase D5F51_16750 PF00248 Aldo/keto reductase family D5F51_16755 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D5F51_16760 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D5F51_16765 PF07885 Ion channel D5F51_16765 PF02254 TrkA-N domain D5F51_16770 PF06411 HdeA/HdeB family D5F51_16775 PF03824 High-affinity nickel-transport protein D5F51_16780 PF03253 Urea transporter D5F51_16785 PF01774 UreD urease accessory protein D5F51_16790 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5F51_16795 PF01730 UreF D5F51_16800 PF02814 UreE urease accessory protein, N-terminal domain D5F51_16800 PF05194 UreE urease accessory protein, C-terminal domain D5F51_16805 PF01979 Amidohydrolase family D5F51_16805 PF00449 Urease alpha-subunit, N-terminal domain D5F51_16810 PF00699 Urease beta subunit D5F51_16815 PF00547 Urease, gamma subunit D5F51_16825 PF00005 ABC transporter D5F51_16830 PF00005 ABC transporter D5F51_16835 PF12911 N-terminal TM domain of oligopeptide transport permease C D5F51_16835 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_16840 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_16845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_16870 PF01965 DJ-1/PfpI family D5F51_16885 PF06711 Protein of unknown function (DUF1198) D5F51_16890 PF09400 Protein of unknown function (DUF2002) D5F51_16900 PF06392 Acid shock protein repeat D5F51_16905 PF03824 High-affinity nickel-transport protein D5F51_16910 PF05957 Bacterial protein of unknown function (DUF883) D5F51_16915 PF00462 Glutaredoxin D5F51_16920 PF07972 NrdI Flavodoxin like D5F51_16925 PF08343 Ribonucleotide reductase N-terminal D5F51_16925 PF02867 Ribonucleotide reductase, barrel domain D5F51_16925 PF00317 Ribonucleotide reductase, all-alpha domain D5F51_16930 PF00268 Ribonucleotide reductase, small chain D5F51_16935 PF00005 ABC transporter D5F51_16935 PF00571 CBS domain D5F51_16940 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_16945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5F51_16955 PF00929 Exonuclease D5F51_16960 PF00075 RNase H D5F51_16965 PF08241 Methyltransferase domain D5F51_16970 PF16123 Hydroxyacylglutathione hydrolase C-terminus D5F51_16970 PF00753 Metallo-beta-lactamase superfamily D5F51_16975 PF01464 Transglycosylase SLT domain D5F51_16975 PF01476 LysM domain D5F51_16980 PF03372 Endonuclease/Exonuclease/phosphatase family D5F51_16985 PF07690 Major Facilitator Superfamily D5F51_16990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_16990 PF03466 LysR substrate binding domain D5F51_16995 PF00248 Aldo/keto reductase family D5F51_17040 PF00005 ABC transporter D5F51_17040 PF09383 NIL domain D5F51_17045 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_17050 PF03180 NLPA lipoprotein D5F51_17055 PF16358 RcsF lipoprotein D5F51_17060 PF01980 tRNA-methyltransferase O D5F51_17060 PF18389 TrmO C-terminal domain D5F51_17065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5F51_17065 PF03129 Anticodon binding domain D5F51_17065 PF04073 Aminoacyl-tRNA editing domain D5F51_17070 PF17185 NlpE C-terminal OB domain D5F51_17070 PF04170 NlpE N-terminal domain D5F51_17075 PF00472 RF-1 domain D5F51_17080 PF07152 YaeQ protein D5F51_17085 PF06786 Uncharacterised protein family (UPF0253) D5F51_17090 PF07073 Modulator of Rho-dependent transcription termination (ROF) D5F51_17095 PF00034 Cytochrome c D5F51_17100 PF11734 TilS substrate C-terminal domain D5F51_17100 PF01171 PP-loop family D5F51_17100 PF09179 TilS substrate binding domain D5F51_17105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5F51_17125 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D5F51_17130 PF01336 OB-fold nucleic acid binding domain D5F51_17130 PF02811 PHP domain D5F51_17130 PF14579 Helix-hairpin-helix motif D5F51_17130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D5F51_17130 PF07733 Bacterial DNA polymerase III alpha NTPase domain D5F51_17135 PF01351 Ribonuclease HII D5F51_17140 PF02684 Lipid-A-disaccharide synthetase D5F51_17145 PF00132 Bacterial transferase hexapeptide (six repeats) D5F51_17145 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D5F51_17150 PF07977 FabA-like domain D5F51_17155 PF00132 Bacterial transferase hexapeptide (six repeats) D5F51_17155 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D5F51_17160 PF03938 Outer membrane protein (OmpH-like) D5F51_17165 PF01103 Surface antigen D5F51_17165 PF07244 Surface antigen variable number repeat D5F51_17170 PF17820 PDZ domain D5F51_17170 PF02163 Peptidase family M50 D5F51_17180 PF01255 Putative undecaprenyl diphosphate synthase D5F51_17185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D5F51_17185 PF13288 DXP reductoisomerase C-terminal domain D5F51_17185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D5F51_17190 PF01765 Ribosome recycling factor D5F51_17195 PF00696 Amino acid kinase family D5F51_17200 PF00889 Elongation factor TS D5F51_17205 PF00318 Ribosomal protein S2 D5F51_17215 PF00557 Metallopeptidase family M24 D5F51_17220 PF01909 Nucleotidyltransferase domain D5F51_17220 PF01842 ACT domain D5F51_17220 PF01966 HD domain D5F51_17220 PF08335 GlnD PII-uridylyltransferase D5F51_17225 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D5F51_17225 PF14602 Hexapeptide repeat of succinyl-transferase D5F51_17225 PF00132 Bacterial transferase hexapeptide (six repeats) D5F51_17230 PF11944 Protein of unknown function (DUF3461) D5F51_17235 PF00258 Flavodoxin D5F51_17240 PF00849 RNA pseudouridylate synthase D5F51_17245 PF04287 tRNA pseudouridine synthase C D5F51_17250 PF07348 Syd protein (SUKH-2) D5F51_17255 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D5F51_17255 PF14489 QueF-like protein D5F51_17260 PF11892 Domain of unknown function (DUF3412) D5F51_17260 PF03641 Possible lysine decarboxylase D5F51_17260 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D5F51_17265 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D5F51_17265 PF01367 5'-3' exonuclease, C-terminal SAM fold D5F51_17270 PF01728 FtsJ-like methyltransferase D5F51_17270 PF18125 RlmM ferredoxin-like domain D5F51_17275 PF04241 Protein of unknown function (DUF423) D5F51_17280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_17280 PF03466 LysR substrate binding domain D5F51_17285 PF06004 Bacterial protein of unknown function (DUF903) D5F51_17290 PF00266 Aminotransferase class-V D5F51_17295 PF02657 Fe-S metabolism associated domain D5F51_17300 PF00899 ThiF family D5F51_17305 PF03562 MltA specific insert domain D5F51_17305 PF06725 3D domain D5F51_17325 PF01520 N-acetylmuramoyl-L-alanine amidase D5F51_17325 PF11741 AMIN domain D5F51_17330 PF00696 Amino acid kinase family D5F51_17330 PF00583 Acetyltransferase (GNAT) family D5F51_17335 PF13538 UvrD-like helicase C-terminal domain D5F51_17340 PF13361 UvrD-like helicase C-terminal domain D5F51_17340 PF00580 UvrD/REP helicase N-terminal domain D5F51_17340 PF12705 PD-(D/E)XK nuclease superfamily D5F51_17345 PF16187 Middle or third domain of peptidase_M16 D5F51_17345 PF05193 Peptidase M16 inactive domain D5F51_17345 PF00675 Insulinase (Peptidase family M16) D5F51_17350 PF17946 RecC C-terminal domain D5F51_17355 PF12528 Type II secretion prepilin peptidase dependent protein C D5F51_17355 PF07963 Prokaryotic N-terminal methylation motif D5F51_17370 PF00114 Pilin (bacterial filament) D5F51_17370 PF07963 Prokaryotic N-terminal methylation motif D5F51_17375 PF00303 Thymidylate synthase D5F51_17380 PF01790 Prolipoprotein diacylglyceryl transferase D5F51_17385 PF00391 PEP-utilising enzyme, mobile domain D5F51_17385 PF05524 PEP-utilising enzyme, N-terminal D5F51_17385 PF02896 PEP-utilising enzyme, TIM barrel domain D5F51_17385 PF01590 GAF domain D5F51_17390 PF00293 NUDIX domain D5F51_17400 PF02976 DNA mismatch repair enzyme MutH D5F51_17405 PF03741 Integral membrane protein TerC family D5F51_17410 PF00248 Aldo/keto reductase family D5F51_17415 PF07690 Major Facilitator Superfamily D5F51_17420 PF00501 AMP-binding enzyme D5F51_17420 PF01553 Acyltransferase D5F51_17420 PF13193 AMP-binding enzyme C-terminal domain D5F51_17425 PF01568 Molydopterin dinucleotide binding domain D5F51_17425 PF00384 Molybdopterin oxidoreductase D5F51_17430 PF00356 Bacterial regulatory proteins, lacI family D5F51_17435 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D5F51_17435 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D5F51_17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_17440 PF03466 LysR substrate binding domain D5F51_17445 PF07690 Major Facilitator Superfamily D5F51_17450 PF03466 LysR substrate binding domain D5F51_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_17475 PF06750 Bacterial Peptidase A24 N-terminal domain D5F51_17475 PF01478 Type IV leader peptidase family D5F51_17485 PF05134 Type II secretion system (T2SS), protein L D5F51_17485 PF12693 GspL periplasmic domain D5F51_17495 PF07963 Prokaryotic N-terminal methylation motif D5F51_17495 PF11612 Type II secretion system (T2SS), protein J D5F51_17500 PF02501 Type II secretion system (T2SS), protein I D5F51_17500 PF07963 Prokaryotic N-terminal methylation motif D5F51_17505 PF08334 Type II secretion system (T2SS), protein G D5F51_17505 PF07963 Prokaryotic N-terminal methylation motif D5F51_17510 PF00482 Type II secretion system (T2SS), protein F D5F51_17515 PF00437 Type II/IV secretion system protein D5F51_17535 PF03960 ArsC family D5F51_17540 PF02040 Arsenical pump membrane protein D5F51_17545 PF02374 Anion-transporting ATPase D5F51_17550 PF06953 Arsenical resistance operon trans-acting repressor ArsD D5F51_17555 PF01022 Bacterial regulatory protein, arsR family D5F51_17580 PF00580 UvrD/REP helicase N-terminal domain D5F51_17580 PF13361 UvrD-like helicase C-terminal domain D5F51_17585 PF00589 Phage integrase family D5F51_17585 PF13356 Arm DNA-binding domain D5F51_17585 PF14659 Phage integrase, N-terminal SAM-like domain D5F51_17595 PF01336 OB-fold nucleic acid binding domain D5F51_17595 PF00152 tRNA synthetases class II (D, K and N) D5F51_17605 PF17768 RecJ OB domain D5F51_17605 PF01368 DHH family D5F51_17605 PF02272 DHHA1 domain D5F51_17610 PF10411 Disulfide bond isomerase protein N-terminus D5F51_17610 PF13098 Thioredoxin-like domain D5F51_17615 PF02899 Phage integrase, N-terminal SAM-like domain D5F51_17615 PF00589 Phage integrase family D5F51_17620 PF00258 Flavodoxin D5F51_17625 PF06123 Inner membrane protein CreD D5F51_17630 PF00672 HAMP domain D5F51_17630 PF00512 His Kinase A (phospho-acceptor) domain D5F51_17630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_17635 PF00486 Transcriptional regulatory protein, C terminal D5F51_17635 PF00072 Response regulator receiver domain D5F51_17640 PF07254 Membrane-bound toxin component of toxin-antitoxin system D5F51_17645 PF03937 Flavinator of succinate dehydrogenase D5F51_17650 PF01571 Aminomethyltransferase folate-binding domain D5F51_17655 PF03006 Haemolysin-III related D5F51_17675 PF02347 Glycine cleavage system P-protein D5F51_17680 PF01597 Glycine cleavage H-protein D5F51_17685 PF01571 Aminomethyltransferase folate-binding domain D5F51_17685 PF08669 Glycine cleavage T-protein C-terminal barrel domain D5F51_17690 PF01494 FAD binding domain D5F51_17695 PF01494 FAD binding domain D5F51_17700 PF05195 Aminopeptidase P, N-terminal domain D5F51_17700 PF00557 Metallopeptidase family M24 D5F51_17705 PF03695 Uncharacterised protein family (UPF0149) D5F51_17710 PF05164 Cell division protein ZapA D5F51_17720 PF01812 5-formyltetrahydrofolate cyclo-ligase family D5F51_17725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5F51_17725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5F51_17725 PF01842 ACT domain D5F51_17730 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D5F51_17735 PF03466 LysR substrate binding domain D5F51_17735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_17740 PF04402 Protein of unknown function (DUF541) D5F51_17745 PF01810 LysE type translocator D5F51_17750 PF00924 Mechanosensitive ion channel D5F51_17750 PF05552 Conserved TM helix D5F51_17760 PF01116 Fructose-bisphosphate aldolase class-II D5F51_17765 PF00162 Phosphoglycerate kinase D5F51_17770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D5F51_17770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D5F51_17780 PF02779 Transketolase, pyrimidine binding domain D5F51_17780 PF00456 Transketolase, thiamine diphosphate binding domain D5F51_17780 PF02780 Transketolase, C-terminal domain D5F51_17785 PF01435 Peptidase family M48 D5F51_17790 PF00355 Rieske [2Fe-2S] domain D5F51_17795 PF17810 Arginine decarboxylase helical bundle domain D5F51_17795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D5F51_17795 PF17944 Arginine decarboxylase C-terminal helical extension D5F51_17800 PF00438 S-adenosylmethionine synthetase, N-terminal domain D5F51_17800 PF02772 S-adenosylmethionine synthetase, central domain D5F51_17800 PF02773 S-adenosylmethionine synthetase, C-terminal domain D5F51_17810 PF04143 Sulphur transport D5F51_17820 PF17283 SprT-like zinc ribbon domain D5F51_17820 PF10263 SprT-like family D5F51_17825 PF04231 Endonuclease I D5F51_17830 PF04452 RNA methyltransferase D5F51_17835 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D5F51_17835 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D5F51_17840 PF02622 Uncharacterized ACR, COG1678 D5F51_17845 PF03652 Holliday junction resolvase D5F51_17850 PF00795 Carbon-nitrogen hydrolase D5F51_17855 PF04371 Porphyromonas-type peptidyl-arginine deiminase D5F51_17860 PF00437 Type II/IV secretion system protein D5F51_17865 PF01168 Alanine racemase, N-terminal domain D5F51_17870 PF03807 NADP oxidoreductase coenzyme F420-dependent D5F51_17870 PF14748 Pyrroline-5-carboxylate reductase dimerisation D5F51_17875 PF02325 YGGT family D5F51_17880 PF02594 Uncharacterised ACR, YggU family COG1872 D5F51_17885 PF01725 Ham1 family D5F51_17890 PF06969 HemN C-terminal domain D5F51_17890 PF04055 Radical SAM superfamily D5F51_17895 PF11101 Protein of unknown function (DUF2884) D5F51_17900 PF04960 Glutaminase D5F51_17905 PF04320 Protein with unknown function (DUF469) D5F51_17915 PF07690 Major Facilitator Superfamily D5F51_17920 PF03466 LysR substrate binding domain D5F51_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_17925 PF02390 Putative methyltransferase D5F51_17930 PF10576 Iron-sulfur binding domain of endonuclease III D5F51_17930 PF00730 HhH-GPD superfamily base excision DNA repair protein D5F51_17930 PF00633 Helix-hairpin-helix motif D5F51_17930 PF14815 NUDIX domain D5F51_17935 PF04362 Bacterial Fe(2+) trafficking D5F51_17940 PF01464 Transglycosylase SLT domain D5F51_17940 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D5F51_17950 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D5F51_17950 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D5F51_17950 PF01276 Orn/Lys/Arg decarboxylase, major domain D5F51_17960 PF00589 Phage integrase family D5F51_17990 PF00580 UvrD/REP helicase N-terminal domain D5F51_17990 PF13361 UvrD-like helicase C-terminal domain D5F51_17990 PF12705 PD-(D/E)XK nuclease superfamily D5F51_17995 PF06470 SMC proteins Flexible Hinge Domain D5F51_17995 PF02463 RecF/RecN/SMC N terminal domain D5F51_18080 PF06932 Protein of unknown function (DUF1283) D5F51_18150 PF00004 ATPase family associated with various cellular activities (AAA) D5F51_18150 PF10431 C-terminal, D2-small domain, of ClpB protein D5F51_18150 PF07724 AAA domain (Cdc48 subfamily) D5F51_18150 PF17871 AAA lid domain D5F51_18160 PF00691 OmpA family D5F51_18160 PF13488 Glycine zipper D5F51_18220 PF00437 Type II/IV secretion system protein D5F51_18270 PF02384 N-6 DNA Methylase D5F51_18275 PF07669 Eco57I restriction-modification methylase D5F51_18325 PF00589 Phage integrase family D5F51_18330 PF04917 Bacterial shufflon protein, N-terminal constant region D5F51_18340 PF01464 Transglycosylase SLT domain D5F51_18355 PF00437 Type II/IV secretion system protein D5F51_18395 PF00436 Single-strand binding protein family D5F51_18405 PF01751 Toprim domain D5F51_18405 PF01131 DNA topoisomerase D5F51_18435 PF01258 Prokaryotic dksA/traR C4-type zinc finger D5F51_18445 PF03796 DnaB-like helicase C terminal domain D5F51_18445 PF00772 DnaB-like helicase N terminal domain D5F51_18455 PF13614 AAA domain D5F51_18475 PF01810 LysE type translocator D5F51_18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_18480 PF03466 LysR substrate binding domain D5F51_18575 PF17871 AAA lid domain D5F51_18575 PF07724 AAA domain (Cdc48 subfamily) D5F51_18575 PF10431 C-terminal, D2-small domain, of ClpB protein D5F51_18575 PF00004 ATPase family associated with various cellular activities (AAA) D5F51_18585 PF00691 OmpA family D5F51_18585 PF13488 Glycine zipper D5F51_18610 PF00550 Phosphopantetheine attachment site D5F51_18635 PF07720 Tetratricopeptide repeat D5F51_18640 PF01312 FlhB HrpN YscU SpaS Family D5F51_18645 PF01311 Bacterial export proteins, family 1 D5F51_18650 PF01313 Bacterial export proteins, family 3 D5F51_18655 PF00813 FliP family D5F51_18675 PF18269 T3SS EscN ATPase C-terminal domain D5F51_18675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5F51_18675 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5F51_18700 PF07201 HrpJ-like domain D5F51_18710 PF12833 Helix-turn-helix domain D5F51_18730 PF01514 Secretory protein of YscJ/FliF family D5F51_18780 PF00672 HAMP domain D5F51_18780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_18780 PF00512 His Kinase A (phospho-acceptor) domain D5F51_18800 PF11356 Type II secretion system protein C D5F51_18805 PF03958 Bacterial type II/III secretion system short domain D5F51_18805 PF00263 Bacterial type II and III secretion system protein D5F51_18810 PF00437 Type II/IV secretion system protein D5F51_18820 PF07963 Prokaryotic N-terminal methylation motif D5F51_18820 PF08334 Type II secretion system (T2SS), protein G D5F51_18825 PF07963 Prokaryotic N-terminal methylation motif D5F51_18830 PF02501 Type II secretion system (T2SS), protein I D5F51_18830 PF07963 Prokaryotic N-terminal methylation motif D5F51_18835 PF11612 Type II secretion system (T2SS), protein J D5F51_18835 PF07963 Prokaryotic N-terminal methylation motif D5F51_18840 PF03934 Type II secretion system (T2SS), protein K D5F51_18855 PF06750 Bacterial Peptidase A24 N-terminal domain D5F51_18855 PF01478 Type IV leader peptidase family D5F51_18860 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) D5F51_18865 PF18416 N-acetylglucosamine binding protein domain 2 D5F51_18865 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D5F51_18900 PF04632 Fusaric acid resistance protein family D5F51_18905 PF00529 HlyD membrane-fusion protein of T1SS D5F51_18905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5F51_18925 PF00557 Metallopeptidase family M24 D5F51_18930 PF00005 ABC transporter D5F51_18935 PF01032 FecCD transport family D5F51_18940 PF01032 FecCD transport family D5F51_18945 PF01497 Periplasmic binding protein D5F51_18950 PF00970 Oxidoreductase FAD-binding domain D5F51_18950 PF00175 Oxidoreductase NAD-binding domain D5F51_18950 PF00042 Globin D5F51_18960 PF07690 Major Facilitator Superfamily D5F51_18960 PF00083 Sugar (and other) transporter D5F51_18965 PF00356 Bacterial regulatory proteins, lacI family D5F51_18970 PF01156 Inosine-uridine preferring nucleoside hydrolase D5F51_18975 PF02690 Na+/Pi-cotransporter D5F51_18990 PF00083 Sugar (and other) transporter D5F51_18990 PF08946 Osmosensory transporter coiled coil D5F51_19000 PF00873 AcrB/AcrD/AcrF family D5F51_19005 PF13533 Biotin-lipoyl like D5F51_19010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_19010 PF03466 LysR substrate binding domain D5F51_19015 PF05681 Fumarate hydratase (Fumerase) D5F51_19020 PF05683 Fumarase C-terminus D5F51_19025 PF00939 Sodium:sulfate symporter transmembrane region D5F51_19055 PF02110 Hydroxyethylthiazole kinase family D5F51_19060 PF00708 Acylphosphatase D5F51_19060 PF01300 Telomere recombination D5F51_19060 PF07503 HypF finger D5F51_19060 PF17788 HypF Kae1-like domain D5F51_19065 PF02769 AIR synthase related protein, C-terminal domain D5F51_19065 PF00586 AIR synthase related protein, N-terminal domain D5F51_19070 PF01924 Hydrogenase formation hypA family D5F51_19075 PF01455 HupF/HypC family D5F51_19080 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5F51_19085 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D5F51_19090 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE D5F51_19095 PF01750 Hydrogenase maturation protease D5F51_19100 PF00374 Nickel-dependent hydrogenase D5F51_19105 PF03916 Polysulphide reductase, NrfD D5F51_19110 PF13247 4Fe-4S dicluster domain D5F51_19115 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D5F51_19115 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D5F51_19120 PF05433 Glycine zipper 2TM domain D5F51_19150 PF02954 Bacterial regulatory protein, Fis family D5F51_19150 PF00072 Response regulator receiver domain D5F51_19150 PF00158 Sigma-54 interaction domain D5F51_19155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_19155 PF02203 Tar ligand binding domain homologue D5F51_19155 PF00672 HAMP domain D5F51_19160 PF01370 NAD dependent epimerase/dehydratase family D5F51_19165 PF07690 Major Facilitator Superfamily D5F51_19175 PF00857 Isochorismatase family D5F51_19175 PF00550 Phosphopantetheine attachment site D5F51_19180 PF13193 AMP-binding enzyme C-terminal domain D5F51_19180 PF00501 AMP-binding enzyme D5F51_19185 PF00425 chorismate binding enzyme D5F51_19190 PF01497 Periplasmic binding protein D5F51_19195 PF05977 Transmembrane secretion effector D5F51_19200 PF01032 FecCD transport family D5F51_19205 PF01032 FecCD transport family D5F51_19210 PF00005 ABC transporter D5F51_19215 PF00975 Thioesterase domain D5F51_19215 PF00501 AMP-binding enzyme D5F51_19215 PF13193 AMP-binding enzyme C-terminal domain D5F51_19215 PF00668 Condensation domain D5F51_19215 PF00550 Phosphopantetheine attachment site D5F51_19220 PF03621 MbtH-like protein D5F51_19225 PF11806 Domain of unknown function (DUF3327) D5F51_19225 PF00756 Putative esterase D5F51_19230 PF07715 TonB-dependent Receptor Plug Domain D5F51_19230 PF00593 TonB dependent receptor D5F51_19240 PF11604 Copper binding periplasmic protein CusF D5F51_19250 PF00529 HlyD membrane-fusion protein of T1SS D5F51_19250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5F51_19255 PF00873 AcrB/AcrD/AcrF family D5F51_19280 PF13629 Pilus formation protein N terminal region D5F51_19280 PF04972 BON domain D5F51_19280 PF00263 Bacterial type II and III secretion system protein D5F51_19295 PF00437 Type II/IV secretion system protein D5F51_19330 PF02472 Biopolymer transport protein ExbD/TolR D5F51_19335 PF01618 MotA/TolQ/ExbB proton channel family D5F51_19340 PF01053 Cys/Met metabolism PLP-dependent enzyme D5F51_19345 PF09335 SNARE associated Golgi protein D5F51_19350 PF06719 AraC-type transcriptional regulator N-terminus D5F51_19350 PF12833 Helix-turn-helix domain D5F51_19355 PF00465 Iron-containing alcohol dehydrogenase D5F51_19360 PF00248 Aldo/keto reductase family D5F51_19365 PF04055 Radical SAM superfamily D5F51_19365 PF11842 Domain of unknown function (DUF3362) D5F51_19365 PF08497 Radical SAM N-terminal D5F51_19370 PF07731 Multicopper oxidase D5F51_19370 PF07732 Multicopper oxidase D5F51_19375 PF01553 Acyltransferase D5F51_19380 PF03989 DNA gyrase C-terminal domain, beta-propeller D5F51_19380 PF00521 DNA gyrase/topoisomerase IV, subunit A D5F51_19385 PF02525 Flavodoxin-like fold D5F51_19390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_19390 PF03466 LysR substrate binding domain D5F51_19395 PF00204 DNA gyrase B D5F51_19395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_19395 PF01751 Toprim domain D5F51_19395 PF00986 DNA gyrase B subunit, carboxyl terminus D5F51_19400 PF05728 Uncharacterised protein family (UPF0227) D5F51_19405 PF00149 Calcineurin-like phosphoesterase D5F51_19410 PF06853 Protein of unknown function (DUF1249) D5F51_19415 PF00293 NUDIX domain D5F51_19420 PF02321 Outer membrane efflux protein D5F51_19425 PF06693 Protein of unknown function (DUF1190) D5F51_19430 PF03738 Glutathionylspermidine synthase preATP-grasp D5F51_19435 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D5F51_19440 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D5F51_19445 PF04380 Membrane fusogenic activity D5F51_19450 PF13520 Amino acid permease D5F51_19455 PF01467 Cytidylyltransferase-like D5F51_19455 PF00294 pfkB family carbohydrate kinase D5F51_19460 PF03710 Glutamate-ammonia ligase adenylyltransferase D5F51_19460 PF08335 GlnD PII-uridylyltransferase D5F51_19465 PF01928 CYTH domain D5F51_19470 PF08239 Bacterial SH3 domain D5F51_19475 PF12627 Probable RNA and SrmB- binding site of polymerase A D5F51_19475 PF01743 Poly A polymerase head domain D5F51_19475 PF01966 HD domain D5F51_19480 PF02673 Bacitracin resistance protein BacA D5F51_19485 PF02152 Dihydroneopterin aldolase D5F51_19490 PF02660 Glycerol-3-phosphate acyltransferase D5F51_19495 PF00814 Glycoprotease family D5F51_19500 PF01165 Ribosomal protein S21 D5F51_19505 PF08278 DNA primase DnaG DnaB-binding D5F51_19505 PF08275 DNA primase catalytic core, N-terminal domain D5F51_19505 PF10410 DnaB-helicase binding domain of primase D5F51_19505 PF01807 CHC2 zinc finger D5F51_19510 PF04542 Sigma-70 region 2 D5F51_19510 PF04539 Sigma-70 region 3 D5F51_19510 PF04546 Sigma-70, non-essential region D5F51_19510 PF03979 Sigma-70 factor, region 1.1 D5F51_19510 PF04545 Sigma-70, region 4 D5F51_19510 PF00140 Sigma-70 factor, region 1.2 D5F51_19520 PF07075 Protein of unknown function (DUF1343) D5F51_19530 PF01915 Glycosyl hydrolase family 3 C-terminal domain D5F51_19530 PF00933 Glycosyl hydrolase family 3 N terminal domain D5F51_19535 PF01418 Helix-turn-helix domain, rpiR family D5F51_19535 PF01380 SIS domain D5F51_19540 PF13580 SIS domain D5F51_19545 PF02378 Phosphotransferase system, EIIC D5F51_19545 PF00367 phosphotransferase system, EIIB D5F51_19550 PF04960 Glutaminase D5F51_19555 PF13520 Amino acid permease D5F51_19560 PF00282 Pyridoxal-dependent decarboxylase conserved domain D5F51_19565 PF01638 HxlR-like helix-turn-helix D5F51_19570 PF07690 Major Facilitator Superfamily D5F51_19575 PF03729 Short repeat of unknown function (DUF308) D5F51_19580 PF00892 EamA-like transporter family D5F51_19585 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5F51_19585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5F51_19590 PF05175 Methyltransferase small domain D5F51_19600 PF01863 Protein of unknown function DUF45 D5F51_19605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5F51_19615 PF03741 Integral membrane protein TerC family D5F51_19620 PF00375 Sodium:dicarboxylate symporter family D5F51_19625 PF10688 Bacterial inner membrane protein D5F51_19630 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D5F51_19630 PF08666 SAF domain D5F51_19635 PF01232 Mannitol dehydrogenase Rossmann domain D5F51_19635 PF08125 Mannitol dehydrogenase C-terminal domain D5F51_19640 PF02614 Glucuronate isomerase D5F51_19645 PF07690 Major Facilitator Superfamily D5F51_19650 PF07729 FCD domain D5F51_19650 PF00392 Bacterial regulatory proteins, gntR family D5F51_19660 PF09335 SNARE associated Golgi protein D5F51_19665 PF13721 SecD export protein N-terminal TM region D5F51_19675 PF05957 Bacterial protein of unknown function (DUF883) D5F51_19680 PF07332 Putative Actinobacterial Holin-X, holin superfamily III D5F51_19685 PF13997 YqjK-like protein D5F51_19690 PF07681 DoxX D5F51_19695 PF13409 Glutathione S-transferase, N-terminal domain D5F51_19700 PF03466 LysR substrate binding domain D5F51_19700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_19705 PF17954 Quercetinase C-terminal cupin domain D5F51_19705 PF02678 Pirin D5F51_19710 PF00107 Zinc-binding dehydrogenase D5F51_19710 PF08240 Alcohol dehydrogenase GroES-like domain D5F51_19715 PF00106 short chain dehydrogenase D5F51_19725 PF00248 Aldo/keto reductase family D5F51_19730 PF03466 LysR substrate binding domain D5F51_19730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_19755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_19755 PF03466 LysR substrate binding domain D5F51_19760 PF00704 Glycosyl hydrolases family 18 D5F51_19765 PF18416 N-acetylglucosamine binding protein domain 2 D5F51_19765 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D5F51_19775 PF02369 Bacterial Ig-like domain (group 1) D5F51_19775 PF11924 Inverse autotransporter, beta-domain D5F51_19775 PF09134 Invasin, domain 3 D5F51_19775 PF07979 Intimin C-type lectin domain D5F51_19785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5F51_19790 PF04348 LppC putative lipoprotein D5F51_19795 PF02021 Uncharacterised protein family UPF0102 D5F51_19800 PF13580 SIS domain D5F51_19805 PF04972 BON domain D5F51_19810 PF00912 Transglycosylase D5F51_19825 PF00072 Response regulator receiver domain D5F51_19825 PF18415 Histidine kinase receptor ArcB trans-membrane domain D5F51_19825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_19825 PF00512 His Kinase A (phospho-acceptor) domain D5F51_19825 PF00989 PAS fold D5F51_19825 PF01627 Hpt domain D5F51_19835 PF16199 Radical_SAM C-terminal domain D5F51_19835 PF04055 Radical SAM superfamily D5F51_19840 PF01493 GXGXG motif D5F51_19840 PF01645 Conserved region in glutamate synthase D5F51_19840 PF00310 Glutamine amidotransferases class-II D5F51_19840 PF04898 Glutamate synthase central domain D5F51_19845 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D5F51_19845 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5F51_19855 PF04386 Stringent starvation protein B D5F51_19860 PF00043 Glutathione S-transferase, C-terminal domain D5F51_19860 PF02798 Glutathione S-transferase, N-terminal domain D5F51_19865 PF00380 Ribosomal protein S9/S16 D5F51_19870 PF00572 Ribosomal protein L13 D5F51_19875 PF03969 AFG1-like ATPase D5F51_19880 PF06295 Protein of unknown function (DUF1043) D5F51_19885 PF00595 PDZ domain D5F51_19885 PF13180 PDZ domain D5F51_19890 PF13180 PDZ domain D5F51_19895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D5F51_19900 PF01722 BolA-like protein D5F51_19905 PF13466 STAS domain D5F51_19910 PF05494 MlaC protein D5F51_19915 PF02470 MlaD protein D5F51_19920 PF02405 Permease MlaE D5F51_19925 PF00005 ABC transporter D5F51_19930 PF01699 Sodium/calcium exchanger protein D5F51_19935 PF00571 CBS domain D5F51_19935 PF01380 SIS domain D5F51_19945 PF06835 Lipopolysaccharide-assembly, LptC-related D5F51_19950 PF03968 OstA-like protein D5F51_19955 PF00005 ABC transporter D5F51_19955 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5F51_19960 PF04552 Sigma-54, DNA binding domain D5F51_19960 PF04963 Sigma-54 factor, core binding domain D5F51_19960 PF00309 Sigma-54 factor, Activator interacting domain (AID) D5F51_19965 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D5F51_19970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D5F51_19975 PF03668 P-loop ATPase protein family D5F51_19980 PF00381 PTS HPr component phosphorylation site D5F51_19985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D5F51_19985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D5F51_19990 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain D5F51_19990 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain D5F51_19995 PF01042 Endoribonuclease L-PSP D5F51_20000 PF14403 Circularly permuted ATP-grasp type 2 D5F51_20005 PF04168 A predicted alpha-helical domain with a conserved ER motif. D5F51_20005 PF14403 Circularly permuted ATP-grasp type 2 D5F51_20020 PF11941 Domain of unknown function (DUF3459) D5F51_20020 PF00128 Alpha amylase, catalytic domain D5F51_20025 PF02378 Phosphotransferase system, EIIC D5F51_20025 PF00367 phosphotransferase system, EIIB D5F51_20030 PF00356 Bacterial regulatory proteins, lacI family D5F51_20035 PF00690 Cation transporter/ATPase, N-terminus D5F51_20035 PF00689 Cation transporting ATPase, C-terminus D5F51_20040 PF05043 Mga helix-turn-helix domain D5F51_20040 PF08279 HTH domain D5F51_20040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D5F51_20040 PF00874 PRD domain D5F51_20045 PF10282 Lactonase, 7-bladed beta-propeller D5F51_20050 PF07071 KDGP aldolase D5F51_20055 PF03841 L-seryl-tRNA selenium transferase D5F51_20060 PF01979 Amidohydrolase family D5F51_20090 PF14760 Rnk N-terminus D5F51_20090 PF01272 Transcription elongation factor, GreA/GreB, C-term D5F51_20095 PF07361 Cytochrome b562 D5F51_20100 PF01523 Putative modulator of DNA gyrase D5F51_20105 PF04751 Protein of unknown function (DUF615) D5F51_20110 PF01337 Barstar (barnase inhibitor) D5F51_20120 PF00171 Aldehyde dehydrogenase family D5F51_20125 PF04632 Fusaric acid resistance protein family D5F51_20130 PF13533 Biotin-lipoyl like D5F51_20135 PF07869 Protein of unknown function (DUF1656) D5F51_20140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_20140 PF03466 LysR substrate binding domain D5F51_20145 PF01523 Putative modulator of DNA gyrase D5F51_20150 PF00795 Carbon-nitrogen hydrolase D5F51_20155 PF13502 AsmA-like C-terminal region D5F51_20155 PF13116 Protein of unknown function D5F51_20160 PF00575 S1 RNA binding domain D5F51_20160 PF10150 Ribonuclease E/G family D5F51_20165 PF02545 Maf-like protein D5F51_20170 PF04093 rod shape-determining protein MreD D5F51_20175 PF04085 rod shape-determining protein MreC D5F51_20185 PF17157 Gammaproteobacterial periplasmic sensor domain D5F51_20185 PF00563 EAL domain D5F51_20185 PF00990 Diguanylate cyclase, GGDEF domain D5F51_20190 PF08240 Alcohol dehydrogenase GroES-like domain D5F51_20190 PF00107 Zinc-binding dehydrogenase D5F51_20195 PF00174 Oxidoreductase molybdopterin binding domain D5F51_20200 PF01794 Ferric reductase like transmembrane component D5F51_20205 PF01220 Dehydroquinase class II D5F51_20210 PF00364 Biotin-requiring enzyme D5F51_20215 PF00289 Biotin carboxylase, N-terminal domain D5F51_20215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5F51_20215 PF02785 Biotin carboxylase C-terminal domain D5F51_20220 PF06196 Protein of unknown function (DUF997) D5F51_20225 PF00474 Sodium:solute symporter family D5F51_20235 PF01207 Dihydrouridine synthase (Dus) D5F51_20240 PF02954 Bacterial regulatory protein, Fis family D5F51_20245 PF08448 PAS fold D5F51_20245 PF00990 Diguanylate cyclase, GGDEF domain D5F51_20250 PF05433 Glycine zipper 2TM domain D5F51_20255 PF00313 'Cold-shock' DNA-binding domain D5F51_20260 PF00313 'Cold-shock' DNA-binding domain D5F51_20270 PF00939 Sodium:sulfate symporter transmembrane region D5F51_20275 PF03279 Bacterial lipid A biosynthesis acyltransferase D5F51_20285 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_20290 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_20295 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_20300 PF00005 ABC transporter D5F51_20310 PF03788 LrgA family D5F51_20315 PF03466 LysR substrate binding domain D5F51_20315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_20320 PF00999 Sodium/hydrogen exchanger family D5F51_20325 PF00860 Permease family D5F51_20335 PF00436 Single-strand binding protein family D5F51_20340 PF17760 UvrA interaction domain D5F51_20340 PF17755 UvrA DNA-binding domain D5F51_20340 PF00005 ABC transporter D5F51_20345 PF04237 YjbR D5F51_20350 PF00155 Aminotransferase class I and II D5F51_20355 PF01168 Alanine racemase, N-terminal domain D5F51_20355 PF00842 Alanine racemase, C-terminal domain D5F51_20360 PF00772 DnaB-like helicase N terminal domain D5F51_20360 PF03796 DnaB-like helicase C terminal domain D5F51_20365 PF00107 Zinc-binding dehydrogenase D5F51_20365 PF08240 Alcohol dehydrogenase GroES-like domain D5F51_20375 PF09583 Phage shock protein G (Phageshock_PspG) D5F51_20380 PF01207 Dihydrouridine synthase (Dus) D5F51_20395 PF01475 Ferric uptake regulator family D5F51_20400 PF05532 CsbD-like D5F51_20405 PF00717 Peptidase S24-like D5F51_20405 PF01726 LexA DNA binding domain D5F51_20410 PF01219 Prokaryotic diacylglycerol kinase D5F51_20415 PF01553 Acyltransferase D5F51_20420 PF01040 UbiA prenyltransferase family D5F51_20425 PF04345 Chorismate lyase D5F51_20435 PF07148 Maltose operon periplasmic protein precursor (MalM) D5F51_20440 PF02264 LamB porin D5F51_20445 PF00005 ABC transporter D5F51_20445 PF17912 MalK OB fold domain D5F51_20455 PF01547 Bacterial extracellular solute-binding protein D5F51_20460 PF14785 Maltose transport system permease protein MalF P2 domain D5F51_20460 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_20465 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_20470 PF06146 Phosphate-starvation-inducible E D5F51_20475 PF00342 Phosphoglucose isomerase D5F51_20480 PF00696 Amino acid kinase family D5F51_20480 PF01842 ACT domain D5F51_20495 PF02310 B12 binding domain D5F51_20495 PF02965 Vitamin B12 dependent methionine synthase, activation domain D5F51_20495 PF00809 Pterin binding enzyme D5F51_20495 PF02607 B12 binding domain D5F51_20495 PF02574 Homocysteine S-methyltransferase D5F51_20500 PF09339 IclR helix-turn-helix domain D5F51_20500 PF01614 Bacterial transcriptional regulator D5F51_20505 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) D5F51_20510 PF00463 Isocitrate lyase family D5F51_20515 PF01274 Malate synthase D5F51_20520 PF04204 Homoserine O-succinyltransferase D5F51_20565 PF00132 Bacterial transferase hexapeptide (six repeats) D5F51_20570 PF01488 Shikimate / quinate 5-dehydrogenase D5F51_20570 PF08501 Shikimate dehydrogenase substrate binding domain D5F51_20570 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D5F51_20575 PF01300 Telomere recombination D5F51_20580 PF01396 Topoisomerase DNA binding C4 zinc finger D5F51_20585 PF04361 Protein of unknown function (DUF494) D5F51_20590 PF17782 DprA winged helix domain D5F51_20590 PF02481 DNA recombination-mediator protein A D5F51_20595 PF01327 Polypeptide deformylase D5F51_20600 PF02911 Formyl transferase, C-terminal domain D5F51_20600 PF00551 Formyl transferase D5F51_20605 PF01029 NusB family D5F51_20605 PF01189 16S rRNA methyltransferase RsmB/F D5F51_20610 PF02254 TrkA-N domain D5F51_20610 PF02080 TrkA-C domain D5F51_20615 PF01741 Large-conductance mechanosensitive channel, MscL D5F51_20620 PF03889 Alternative ribosome-rescue factor A D5F51_20625 PF13411 MerR HTH family regulatory protein D5F51_20630 PF09350 Domain of unknown function (DUF1992) D5F51_20635 PF01196 Ribosomal protein L17 D5F51_20640 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D5F51_20640 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D5F51_20640 PF01000 RNA polymerase Rpb3/RpoA insert domain D5F51_20645 PF00163 Ribosomal protein S4/S9 N-terminal domain D5F51_20645 PF01479 S4 domain D5F51_20650 PF00411 Ribosomal protein S11 D5F51_20655 PF00416 Ribosomal protein S13/S18 D5F51_20660 PF00444 Ribosomal protein L36 D5F51_20665 PF00344 SecY translocase D5F51_20670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D5F51_20675 PF00327 Ribosomal protein L30p/L7e D5F51_20680 PF00333 Ribosomal protein S5, N-terminal domain D5F51_20680 PF03719 Ribosomal protein S5, C-terminal domain D5F51_20685 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D5F51_20690 PF00347 Ribosomal protein L6 D5F51_20695 PF00410 Ribosomal protein S8 D5F51_20700 PF00253 Ribosomal protein S14p/S29e D5F51_20705 PF00281 Ribosomal protein L5 D5F51_20705 PF00673 ribosomal L5P family C-terminus D5F51_20710 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D5F51_20710 PF00467 KOW motif D5F51_20715 PF00238 Ribosomal protein L14p/L23e D5F51_20720 PF00366 Ribosomal protein S17 D5F51_20725 PF00831 Ribosomal L29 protein D5F51_20730 PF00252 Ribosomal protein L16p/L10e D5F51_20735 PF00189 Ribosomal protein S3, C-terminal domain D5F51_20735 PF07650 KH domain D5F51_20740 PF00237 Ribosomal protein L22p/L17e D5F51_20745 PF00203 Ribosomal protein S19 D5F51_20750 PF03947 Ribosomal Proteins L2, C-terminal domain D5F51_20750 PF00181 Ribosomal Proteins L2, RNA binding domain D5F51_20755 PF00276 Ribosomal protein L23 D5F51_20760 PF00573 Ribosomal protein L4/L1 family D5F51_20765 PF00297 Ribosomal protein L3 D5F51_20770 PF00338 Ribosomal protein S10p/S20e D5F51_20775 PF00210 Ferritin-like domain D5F51_20780 PF04324 BFD-like [2Fe-2S] binding domain D5F51_20785 PF03143 Elongation factor Tu C-terminal domain D5F51_20785 PF03144 Elongation factor Tu domain 2 D5F51_20785 PF00009 Elongation factor Tu GTP binding domain D5F51_20795 PF00679 Elongation factor G C-terminus D5F51_20795 PF14492 Elongation Factor G, domain II D5F51_20795 PF03144 Elongation factor Tu domain 2 D5F51_20795 PF03764 Elongation factor G, domain IV D5F51_20795 PF00009 Elongation factor Tu GTP binding domain D5F51_20800 PF00177 Ribosomal protein S7p/S5e D5F51_20805 PF00164 Ribosomal protein S12/S23 D5F51_20810 PF04077 DsrH like protein D5F51_20815 PF02635 DsrE/DsrF-like family D5F51_20820 PF02635 DsrE/DsrF-like family D5F51_20825 PF13309 HTH domain D5F51_20825 PF08348 YheO-like PAS domain D5F51_20830 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D5F51_20830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5F51_20835 PF04102 SlyX D5F51_20840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5F51_20845 PF09526 Probable metal-binding protein (DUF2387) D5F51_20850 PF02254 TrkA-N domain D5F51_20850 PF00999 Sodium/hydrogen exchanger family D5F51_20855 PF02525 Flavodoxin-like fold D5F51_20860 PF12848 ABC transporter D5F51_20860 PF00005 ABC transporter D5F51_20870 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D5F51_20875 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_20880 PF00005 ABC transporter D5F51_20885 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5F51_20890 PF02567 Phenazine biosynthesis-like protein D5F51_20895 PF01810 LysE type translocator D5F51_20900 PF00561 alpha/beta hydrolase fold D5F51_20905 PF06794 Uncharacterised protein family (UPF0270) D5F51_20910 PF00485 Phosphoribulokinase / Uridine kinase family D5F51_20915 PF02566 OsmC-like protein D5F51_20920 PF00027 Cyclic nucleotide-binding domain D5F51_20920 PF13545 Crp-like helix-turn-helix domain D5F51_20925 PF12805 FUSC-like inner membrane protein yccS D5F51_20930 PF00202 Aminotransferase class-III D5F51_20935 PF00117 Glutamine amidotransferase class-I D5F51_20940 PF05872 Bacterial protein of unknown function (DUF853) D5F51_20945 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D5F51_20950 PF02056 Family 4 glycosyl hydrolase D5F51_20950 PF11975 Family 4 glycosyl hydrolase C-terminal domain D5F51_20955 PF00356 Bacterial regulatory proteins, lacI family D5F51_20970 PF07690 Major Facilitator Superfamily D5F51_20975 PF07969 Amidohydrolase family D5F51_20980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D5F51_20980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D5F51_20980 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5F51_20980 PF04324 BFD-like [2Fe-2S] binding domain D5F51_20980 PF18267 Rubredoxin NAD+ reductase C-terminal domain D5F51_20985 PF13806 Rieske-like [2Fe-2S] domain D5F51_20990 PF01226 Formate/nitrite transporter D5F51_20995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5F51_20995 PF14824 Sirohaem biosynthesis protein central D5F51_20995 PF10414 Sirohaem synthase dimerisation region D5F51_21000 PF00579 tRNA synthetases class I (W and Y) D5F51_21005 PF13419 Haloacid dehalogenase-like hydrolase D5F51_21010 PF00834 Ribulose-phosphate 3 epimerase family D5F51_21015 PF02086 D12 class N6 adenine-specific DNA methyltransferase D5F51_21020 PF05036 Sporulation related domain D5F51_21025 PF01761 3-dehydroquinate synthase D5F51_21030 PF01202 Shikimate kinase D5F51_21035 PF00263 Bacterial type II and III secretion system protein D5F51_21035 PF03958 Bacterial type II/III secretion system short domain D5F51_21060 PF00905 Penicillin binding protein transpeptidase domain D5F51_21060 PF17092 Penicillin-binding protein OB-like domain D5F51_21060 PF00912 Transglycosylase D5F51_21065 PF00293 NUDIX domain D5F51_21070 PF07095 Intracellular growth attenuator protein IgaA D5F51_21075 PF13419 Haloacid dehalogenase-like hydrolase D5F51_21080 PF01479 S4 domain D5F51_21085 PF01430 Hsp33 protein D5F51_21090 PF01293 Phosphoenolpyruvate carboxykinase D5F51_21095 PF00512 His Kinase A (phospho-acceptor) domain D5F51_21095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_21095 PF00672 HAMP domain D5F51_21100 PF00072 Response regulator receiver domain D5F51_21100 PF00486 Transcriptional regulatory protein, C terminal D5F51_21105 PF01272 Transcription elongation factor, GreA/GreB, C-term D5F51_21105 PF03449 Transcription elongation factor, N-terminal D5F51_21110 PF17674 HHH domain D5F51_21110 PF16921 Tex protein YqgF-like domain D5F51_21110 PF00575 S1 RNA binding domain D5F51_21110 PF09371 Tex-like protein N-terminal domain D5F51_21125 PF04023 FeoA domain D5F51_21130 PF17910 FeoB cytosolic helical domain D5F51_21130 PF07670 Nucleoside recognition D5F51_21130 PF07664 Ferrous iron transport protein B C terminus D5F51_21130 PF02421 Ferrous iron transport protein B D5F51_21135 PF09012 FeoC like transcriptional regulator D5F51_21140 PF07338 Protein of unknown function (DUF1471) D5F51_21145 PF00561 alpha/beta hydrolase fold D5F51_21150 PF00156 Phosphoribosyl transferase domain D5F51_21155 PF01106 NifU-like domain D5F51_21155 PF01521 Iron-sulphur cluster biosynthesis D5F51_21160 PF02446 4-alpha-glucanotransferase D5F51_21165 PF00343 Carbohydrate phosphorylase D5F51_21170 PF17874 MalT-like TPR region D5F51_21170 PF00196 Bacterial regulatory proteins, luxR family D5F51_21180 PF00581 Rhodanese-like domain D5F51_21185 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D5F51_21185 PF01694 Rhomboid family D5F51_21190 PF08220 DeoR-like helix-turn-helix domain D5F51_21190 PF00455 DeoR C terminal sensor domain D5F51_21195 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D5F51_21195 PF01266 FAD dependent oxidoreductase D5F51_21200 PF00343 Carbohydrate phosphorylase D5F51_21205 PF00534 Glycosyl transferases group 1 D5F51_21205 PF08323 Starch synthase catalytic domain D5F51_21210 PF00483 Nucleotidyl transferase D5F51_21215 PF00128 Alpha amylase, catalytic domain D5F51_21215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D5F51_21215 PF18390 Glycogen debranching enzyme C-terminal domain D5F51_21220 PF00128 Alpha amylase, catalytic domain D5F51_21220 PF02806 Alpha amylase, C-terminal all-beta domain D5F51_21220 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D5F51_21225 PF07694 5TMR of 5TMR-LYT D5F51_21225 PF06580 Histidine kinase D5F51_21230 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5F51_21230 PF02774 Semialdehyde dehydrogenase, dimerisation domain D5F51_21235 PF01914 MarC family integral membrane protein D5F51_21240 PF01202 Shikimate kinase D5F51_21245 PF02447 GntP family permease D5F51_21250 PF00356 Bacterial regulatory proteins, lacI family D5F51_21250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D5F51_21255 PF02678 Pirin D5F51_21255 PF17954 Quercetinase C-terminal cupin domain D5F51_21265 PF00583 Acetyltransferase (GNAT) family D5F51_21270 PF01261 Xylose isomerase-like TIM barrel D5F51_21275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5F51_21275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5F51_21280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5F51_21280 PF00205 Thiamine pyrophosphate enzyme, central domain D5F51_21280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5F51_21285 PF00294 pfkB family carbohydrate kinase D5F51_21295 PF04962 KduI/IolB family D5F51_21300 PF00171 Aldehyde dehydrogenase family D5F51_21305 PF00083 Sugar (and other) transporter D5F51_21320 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D5F51_21325 PF05683 Fumarase C-terminus D5F51_21325 PF05681 Fumarate hydratase (Fumerase) D5F51_21330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5F51_21330 PF03466 LysR substrate binding domain D5F51_21335 PF10414 Sirohaem synthase dimerisation region D5F51_21335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5F51_21335 PF14824 Sirohaem biosynthesis protein central D5F51_21340 PF00288 GHMP kinases N terminal domain D5F51_21345 PF02310 B12 binding domain D5F51_21350 PF13941 MutL protein D5F51_21355 PF06368 Methylaspartate mutase E chain (MutE) D5F51_21360 PF05034 Methylaspartate ammonia-lyase N-terminus D5F51_21360 PF07476 Methylaspartate ammonia-lyase C-terminus D5F51_21375 PF00375 Sodium:dicarboxylate symporter family D5F51_21380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D5F51_21390 PF11924 Inverse autotransporter, beta-domain D5F51_21390 PF02369 Bacterial Ig-like domain (group 1) D5F51_21390 PF09134 Invasin, domain 3 D5F51_21390 PF07979 Intimin C-type lectin domain D5F51_21425 PF11426 Tn7 transposition regulator TnsC D5F51_21425 PF13401 AAA domain D5F51_21430 PF00665 Integrase core domain D5F51_21435 PF08721 TnsA endonuclease C terminal D5F51_21435 PF08722 TnsA endonuclease N terminal D5F51_21445 PF01384 Phosphate transporter family D5F51_21450 PF10625 Universal stress protein B (UspB) D5F51_21455 PF00582 Universal stress protein family D5F51_21460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D5F51_21460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D5F51_21465 PF08548 Peptidase M10 serralysin C terminal D5F51_21465 PF00413 Matrixin D5F51_21465 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D5F51_21470 PF04445 Putative SAM-dependent methyltransferase D5F51_21475 PF01432 Peptidase family M3 D5F51_21485 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D5F51_21490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5F51_21490 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5F51_21495 PF03212 Pertactin D5F51_21495 PF13018 Extended Signal Peptide of Type V secretion system D5F51_21495 PF03797 Autotransporter beta-domain D5F51_21495 PF16168 Adhesin of bacterial autotransporter system, probable stalk D5F51_21500 PF03631 Virulence factor BrkB D5F51_21505 PF00083 Sugar (and other) transporter D5F51_21505 PF07690 Major Facilitator Superfamily D5F51_21510 PF02611 CDP-diacylglycerol pyrophosphatase D5F51_21515 PF05170 AsmA family D5F51_21520 PF00563 EAL domain D5F51_21525 PF01361 Tautomerase enzyme D5F51_21530 PF00294 pfkB family carbohydrate kinase D5F51_21535 PF05193 Peptidase M16 inactive domain D5F51_21535 PF00675 Insulinase (Peptidase family M16) D5F51_21540 PF00375 Sodium:dicarboxylate symporter family D5F51_21550 PF06917 Periplasmic pectate lyase D5F51_21555 PF06178 Oligogalacturonate-specific porin protein (KdgM) D5F51_21560 PF00672 HAMP domain D5F51_21560 PF00990 Diguanylate cyclase, GGDEF domain D5F51_21560 PF17154 Gammaproteobacterial periplasmic sensor domain D5F51_21560 PF00563 EAL domain D5F51_21570 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) D5F51_21575 PF01270 Glycosyl hydrolases family 8 D5F51_21580 PF03170 Bacterial cellulose synthase subunit D5F51_21585 PF07238 PilZ domain D5F51_21585 PF03552 Cellulose synthase D5F51_21585 PF00535 Glycosyl transferase family 2 D5F51_21590 PF06564 Cellulose biosynthesis protein BcsQ D5F51_21600 PF10995 Cellulose biosynthesis GIL D5F51_21605 PF11120 Cellulose biosynthesis protein BcsF D5F51_21610 PF11658 Cellulose biosynthesis protein BcsG D5F51_21620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5F51_21620 PF00005 ABC transporter D5F51_21625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5F51_21625 PF00005 ABC transporter D5F51_21630 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_21630 PF12911 N-terminal TM domain of oligopeptide transport permease C D5F51_21635 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_21640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5F51_21645 PF05860 haemagglutination activity domain D5F51_21645 PF04829 Pre-toxin domain with VENN motif D5F51_21645 PF13332 Hemagglutinin repeat D5F51_21645 PF13018 Extended Signal Peptide of Type V secretion system D5F51_21650 PF17287 POTRA domain D5F51_21650 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D5F51_21650 PF08479 POTRA domain, ShlB-type D5F51_21655 PF04829 Pre-toxin domain with VENN motif D5F51_21655 PF05860 haemagglutination activity domain D5F51_21655 PF05594 Haemagluttinin repeat D5F51_21655 PF13332 Hemagglutinin repeat D5F51_21665 PF07690 Major Facilitator Superfamily D5F51_21670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_21670 PF07730 Histidine kinase D5F51_21670 PF05231 MASE1 D5F51_21675 PF00196 Bacterial regulatory proteins, luxR family D5F51_21675 PF00072 Response regulator receiver domain D5F51_21680 PF00884 Sulfatase D5F51_21680 PF08019 Phosphoethanolamine transferase EptA/EptB D5F51_21685 PF02566 OsmC-like protein D5F51_21690 PF12146 Serine aminopeptidase, S33 D5F51_21695 PF00324 Amino acid permease D5F51_21700 PF00221 Aromatic amino acid lyase D5F51_21705 PF01175 Urocanase Rossmann-like domain D5F51_21705 PF17392 Urocanase C-terminal domain D5F51_21705 PF17391 Urocanase N-terminal domain D5F51_21710 PF00356 Bacterial regulatory proteins, lacI family D5F51_21720 PF00294 pfkB family carbohydrate kinase D5F51_21725 PF07690 Major Facilitator Superfamily D5F51_21730 PF03960 ArsC family D5F51_21740 PF01022 Bacterial regulatory protein, arsR family D5F51_21750 PF17345 Family of unknown function (DUF5375) D5F51_21780 PF04606 Ogr/Delta-like zinc finger D5F51_21795 PF13356 Arm DNA-binding domain D5F51_21795 PF14659 Phage integrase, N-terminal SAM-like domain D5F51_21795 PF00589 Phage integrase family D5F51_21805 PF12833 Helix-turn-helix domain D5F51_21810 PF02653 Branched-chain amino acid transport system / permease component D5F51_21815 PF00005 ABC transporter D5F51_21820 PF13407 Periplasmic binding protein domain D5F51_21830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5F51_21830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5F51_21835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_21835 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_21840 PF00857 Isochorismatase family D5F51_21850 PF01757 Acyltransferase family D5F51_21855 PF07690 Major Facilitator Superfamily D5F51_21860 PF00009 Elongation factor Tu GTP binding domain D5F51_21860 PF09107 Elongation factor SelB, winged helix D5F51_21860 PF09106 Elongation factor SelB, winged helix D5F51_21860 PF03144 Elongation factor Tu domain 2 D5F51_21865 PF12390 Selenocysteine synthase N terminal D5F51_21865 PF03841 L-seryl-tRNA selenium transferase D5F51_21870 PF04216 Protein involved in formate dehydrogenase formation D5F51_21875 PF01292 Prokaryotic cytochrome b561 D5F51_21880 PF09163 Formate dehydrogenase N, transmembrane D5F51_21880 PF13247 4Fe-4S dicluster domain D5F51_21890 PF02634 FdhD/NarQ family D5F51_21895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D5F51_21895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D5F51_21900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_21900 PF02203 Tar ligand binding domain homologue D5F51_21900 PF00672 HAMP domain D5F51_21905 PF03473 MOSC domain D5F51_21905 PF03475 3-alpha domain D5F51_21910 PF10928 Protein of unknown function (DUF2810) D5F51_21915 PF00155 Aminotransferase class I and II D5F51_21915 PF00392 Bacterial regulatory proteins, gntR family D5F51_21925 PF05068 Mannitol repressor D5F51_21930 PF01232 Mannitol dehydrogenase Rossmann domain D5F51_21930 PF08125 Mannitol dehydrogenase C-terminal domain D5F51_21935 PF02378 Phosphotransferase system, EIIC D5F51_21935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D5F51_21935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D5F51_21940 PF11254 Protein of unknown function (DUF3053) D5F51_21945 PF02092 Glycyl-tRNA synthetase beta subunit D5F51_21945 PF05746 DALR anticodon binding domain D5F51_21950 PF02091 Glycyl-tRNA synthetase alpha subunit D5F51_21955 PF03352 Methyladenine glycosylase D5F51_21960 PF00583 Acetyltransferase (GNAT) family D5F51_21975 PF07690 Major Facilitator Superfamily D5F51_21980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5F51_21980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5F51_21985 PF00128 Alpha amylase, catalytic domain D5F51_21990 PF00155 Aminotransferase class I and II D5F51_21995 PF06826 Predicted Permease Membrane Region D5F51_21995 PF02080 TrkA-C domain D5F51_22005 PF00011 Hsp20/alpha crystallin family D5F51_22010 PF00011 Hsp20/alpha crystallin family D5F51_22015 PF07119 Protein of unknown function (DUF1375) D5F51_22020 PF07676 WD40-like Beta Propeller Repeat D5F51_22020 PF12566 Protein of unknown function (DUF3748) D5F51_22025 PF13309 HTH domain D5F51_22025 PF08348 YheO-like PAS domain D5F51_22030 PF00291 Pyridoxal-phosphate dependent enzyme D5F51_22035 PF02423 Ornithine cyclodeaminase/mu-crystallin family D5F51_22040 PF00419 Fimbrial protein D5F51_22045 PF00577 Outer membrane usher protein D5F51_22045 PF13954 PapC N-terminal domain D5F51_22045 PF13953 PapC C-terminal domain D5F51_22050 PF02753 Pili assembly chaperone PapD, C-terminal domain D5F51_22050 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_22060 PF00872 Transposase, Mutator family D5F51_22070 PF00204 DNA gyrase B D5F51_22070 PF01751 Toprim domain D5F51_22070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_22070 PF18053 DNA gyrase B subunit insert domain D5F51_22070 PF00986 DNA gyrase B subunit, carboxyl terminus D5F51_22075 PF02463 RecF/RecN/SMC N terminal domain D5F51_22080 PF02768 DNA polymerase III beta subunit, C-terminal domain D5F51_22080 PF02767 DNA polymerase III beta subunit, central domain D5F51_22080 PF00712 DNA polymerase III beta subunit, N-terminal domain D5F51_22085 PF11638 DnaA N-terminal domain D5F51_22085 PF08299 Bacterial dnaA protein helix-turn-helix D5F51_22085 PF00308 Bacterial dnaA protein D5F51_22095 PF00468 Ribosomal protein L34 D5F51_22100 PF00825 Ribonuclease P D5F51_22105 PF01809 Putative membrane protein insertion efficiency factor D5F51_22110 PF02096 60Kd inner membrane protein D5F51_22110 PF14849 YidC periplasmic domain D5F51_22115 PF10396 GTP-binding protein TrmE N-terminus D5F51_22115 PF12631 MnmE helical domain D5F51_22115 PF01926 50S ribosome-binding GTPase D5F51_22120 PF07055 Enoyl reductase FAD binding domain D5F51_22120 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D5F51_22120 PF12241 Trans-2-enoyl-CoA reductase catalytic region D5F51_22130 PF09383 NIL domain D5F51_22130 PF00005 ABC transporter D5F51_22135 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_22140 PF02203 Tar ligand binding domain homologue D5F51_22140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5F51_22140 PF00672 HAMP domain D5F51_22145 PF03358 NADPH-dependent FMN reductase D5F51_22150 PF00512 His Kinase A (phospho-acceptor) domain D5F51_22150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5F51_22155 PF00196 Bacterial regulatory proteins, luxR family D5F51_22155 PF00072 Response regulator receiver domain D5F51_22165 PF00860 Permease family D5F51_22170 PF13419 Haloacid dehalogenase-like hydrolase D5F51_22180 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_22185 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5F51_22190 PF00102 Protein-tyrosine phosphatase D5F51_22190 PF09013 YopH, N-terminal D5F51_22200 PF01895 PhoU domain D5F51_22205 PF00005 ABC transporter D5F51_22210 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_22215 PF00528 Binding-protein-dependent transport system inner membrane component D5F51_22220 PF12849 PBP superfamily domain D5F51_22235 PF01380 SIS domain D5F51_22240 PF00132 Bacterial transferase hexapeptide (six repeats) D5F51_22240 PF12804 MobA-like NTP transferase domain D5F51_22245 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D5F51_22245 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D5F51_22250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5F51_22250 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5F51_22255 PF00231 ATP synthase D5F51_22260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5F51_22260 PF00306 ATP synthase alpha/beta chain, C terminal domain D5F51_22260 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5F51_22265 PF00213 ATP synthase delta (OSCP) subunit D5F51_22270 PF00430 ATP synthase B/B' CF(0) D5F51_22275 PF00137 ATP synthase subunit C D5F51_22280 PF00119 ATP synthase A chain D5F51_22285 PF03899 ATP synthase I chain D5F51_22290 PF02527 rRNA small subunit methyltransferase G D5F51_22295 PF01134 Glucose inhibited division protein A D5F51_22295 PF13932 GidA associated domain D5F51_22305 PF00239 Resolvase, N terminal domain D5F51_22305 PF02796 Helix-turn-helix domain of resolvase D5F51_22315 PF02369 Bacterial Ig-like domain (group 1) D5F51_22315 PF11924 Inverse autotransporter, beta-domain D5F51_22315 PF09134 Invasin, domain 3 D5F51_22400 PF02195 ParB-like nuclease domain D5F51_22415 PF00717 Peptidase S24-like D5F51_22420 PF11799 impB/mucB/samB family C-terminal domain D5F51_22420 PF13438 Domain of unknown function (DUF4113) D5F51_22420 PF00817 impB/mucB/samB family D5F51_22420 PF11798 IMS family HHH motif D5F51_22435 PF06406 StbA protein D5F51_22455 PF00239 Resolvase, N terminal domain D5F51_22455 PF02796 Helix-turn-helix domain of resolvase D5F51_22460 PF04754 Putative transposase, YhgA-like D5F51_22485 PF13610 DDE domain D5F51_22500 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5F51_22505 PF13953 PapC C-terminal domain D5F51_22505 PF13954 PapC N-terminal domain D5F51_22505 PF00577 Outer membrane usher protein D5F51_22515 PF13411 MerR HTH family regulatory protein D5F51_22530 PF02796 Helix-turn-helix domain of resolvase D5F51_22530 PF00239 Resolvase, N terminal domain D5F51_22535 PF13700 Domain of unknown function (DUF4158) D5F51_22535 PF01526 Tn3 transposase DDE domain D5F51_22550 PF03960 ArsC family D5F51_22555 PF02040 Arsenical pump membrane protein D5F51_22560 PF02374 Anion-transporting ATPase D5F51_22565 PF06953 Arsenical resistance operon trans-acting repressor ArsD D5F51_22570 PF01022 Bacterial regulatory protein, arsR family D5F51_22585 PF10723 Replication regulatory protein RepB D5F51_22595 PF08751 TrwC relaxase D5F51_22595 PF18340 DNA relaxase TraI 2B/2B-like domain D5F51_22595 PF07057 DNA helicase TraI D5F51_22595 PF18272 single-stranded DNA binding TraI N-terminal subdomain