locus-tag class description F0T03_00010 PF00258 Flavodoxin F0T03_00015 PF01037 Lrp/AsnC ligand binding domain F0T03_00020 PF03590 Aspartate-ammonia ligase F0T03_00030 PF05762 VWA domain containing CoxE-like protein F0T03_00035 PF12592 Protein of unknown function (DUF3763) F0T03_00035 PF17868 AAA lid domain F0T03_00035 PF07728 AAA domain (dynein-related subfamily) F0T03_00040 PF02705 K+ potassium transporter F0T03_00045 PF05025 RbsD / FucU transport protein family F0T03_00050 PF00005 ABC transporter F0T03_00055 PF02653 Branched-chain amino acid transport system / permease component F0T03_00060 PF13407 Periplasmic binding protein domain F0T03_00065 PF00294 pfkB family carbohydrate kinase F0T03_00070 PF00356 Bacterial regulatory proteins, lacI family F0T03_00075 PF07690 Major Facilitator Superfamily F0T03_00080 PF07729 FCD domain F0T03_00080 PF00392 Bacterial regulatory proteins, gntR family F0T03_00110 PF03205 Molybdopterin guanine dinucleotide synthesis protein B F0T03_00115 PF12804 MobA-like NTP transferase domain F0T03_00120 PF06288 Protein of unknown function (DUF1040) F0T03_00125 PF01636 Phosphotransferase enzyme family F0T03_00130 PF01323 DSBA-like thioredoxin domain F0T03_00135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F0T03_00135 PF01367 5'-3' exonuclease, C-terminal SAM fold F0T03_00135 PF01612 3'-5' exonuclease F0T03_00135 PF00476 DNA polymerase family A F0T03_00140 PF01926 50S ribosome-binding GTPase F0T03_00145 PF04220 Der GTPase activator (YihI) F0T03_00155 PF04055 Radical SAM superfamily F0T03_00155 PF06969 HemN C-terminal domain F0T03_00160 PF02954 Bacterial regulatory protein, Fis family F0T03_00160 PF00158 Sigma-54 interaction domain F0T03_00160 PF00072 Response regulator receiver domain F0T03_00165 PF00512 His Kinase A (phospho-acceptor) domain F0T03_00165 PF00989 PAS fold F0T03_00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_00170 PF00120 Glutamine synthetase, catalytic domain F0T03_00170 PF03951 Glutamine synthetase, beta-Grasp domain F0T03_00180 PF13419 Haloacid dehalogenase-like hydrolase F0T03_00185 PF03631 Virulence factor BrkB F0T03_00190 PF02580 D-Tyr-tRNA(Tyr) deacylase F0T03_00195 PF09500 Putative thioesterase (yiiD_Cterm) F0T03_00195 PF00583 Acetyltransferase (GNAT) family F0T03_00200 PF13693 Winged helix-turn-helix DNA-binding F0T03_00215 PF05170 AsmA family F0T03_00220 PF00860 Permease family F0T03_00225 PF03616 Sodium/glutamate symporter F0T03_00230 PF17191 RecG wedge domain F0T03_00230 PF00271 Helicase conserved C-terminal domain F0T03_00230 PF00270 DEAD/DEAH box helicase F0T03_00235 PF00588 SpoU rRNA Methylase family F0T03_00235 PF12105 SpoU, rRNA methylase, C-terminal F0T03_00240 PF02824 TGS domain F0T03_00240 PF04607 Region found in RelA / SpoT proteins F0T03_00240 PF13291 ACT domain F0T03_00245 PF01192 RNA polymerase Rpb6 F0T03_00250 PF00625 Guanylate kinase F0T03_00255 PF03120 NAD-dependent DNA ligase OB-fold domain F0T03_00255 PF01653 NAD-dependent DNA ligase adenylation domain F0T03_00260 PF03458 UPF0126 domain F0T03_00270 PF07670 Nucleoside recognition F0T03_00270 PF07662 Na+ dependent nucleoside transporter C-terminus F0T03_00270 PF01773 Na+ dependent nucleoside transporter N-terminus F0T03_00275 PF00378 Enoyl-CoA hydratase/isomerase F0T03_00280 PF13426 PAS domain F0T03_00280 PF00563 EAL domain F0T03_00280 PF00990 Diguanylate cyclase, GGDEF domain F0T03_00290 PF03755 YicC-like family, N-terminal region F0T03_00290 PF08340 Domain of unknown function (DUF1732) F0T03_00295 PF03725 3' exoribonuclease family, domain 2 F0T03_00295 PF01138 3' exoribonuclease family, domain 1 F0T03_00300 PF00156 Phosphoribosyl transferase domain F0T03_00305 PF00440 Bacterial regulatory proteins, tetR family F0T03_00310 PF00692 dUTPase F0T03_00315 PF02441 Flavoprotein F0T03_00315 PF04127 DNA / pantothenate metabolism flavoprotein F0T03_00320 PF04002 RadC-like JAB domain F0T03_00330 PF00830 Ribosomal L28 family F0T03_00335 PF00471 Ribosomal protein L33 F0T03_00340 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F0T03_00340 PF06827 Zinc finger found in FPG and IleRS F0T03_00340 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F0T03_00345 PF01467 Cytidylyltransferase-like F0T03_00350 PF00535 Glycosyl transferase family 2 F0T03_00355 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) F0T03_00360 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F0T03_00365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F0T03_00370 PF01370 NAD dependent epimerase/dehydratase family F0T03_00375 PF00155 Aminotransferase class I and II F0T03_00380 PF00107 Zinc-binding dehydrogenase F0T03_00380 PF08240 Alcohol dehydrogenase GroES-like domain F0T03_00385 PF04748 Divergent polysaccharide deacetylase F0T03_00390 PF01551 Peptidase family M23 F0T03_00395 PF06415 BPG-independent PGAM N-terminus (iPGM_N) F0T03_00395 PF01676 Metalloenzyme superfamily F0T03_00400 PF00581 Rhodanese-like domain F0T03_00405 PF00462 Glutaredoxin F0T03_00410 PF02556 Preprotein translocase subunit SecB F0T03_00415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F0T03_00415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F0T03_00420 PF06426 Serine acetyltransferase, N-terminal F0T03_00420 PF00132 Bacterial transferase hexapeptide (six repeats) F0T03_00425 PF00588 SpoU rRNA Methylase family F0T03_00430 PF02805 Metal binding domain of Ada F0T03_00430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F0T03_00430 PF12833 Helix-turn-helix domain F0T03_00430 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F0T03_00435 PF00512 His Kinase A (phospho-acceptor) domain F0T03_00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_00435 PF00672 HAMP domain F0T03_00435 PF16527 Two-component sensor protein CpxA, periplasmic domain F0T03_00440 PF00072 Response regulator receiver domain F0T03_00440 PF00486 Transcriptional regulatory protein, C terminal F0T03_00445 PF07813 LTXXQ motif family protein F0T03_00450 PF01545 Cation efflux family F0T03_00450 PF16916 Dimerisation domain of Zinc Transporter F0T03_00455 PF00365 Phosphofructokinase F0T03_00470 PF00121 Triosephosphate isomerase F0T03_00475 PF07305 Protein of unknown function (DUF1454) F0T03_00480 PF05656 Protein of unknown function (DUF805) F0T03_00485 PF00970 Oxidoreductase FAD-binding domain F0T03_00485 PF00175 Oxidoreductase NAD-binding domain F0T03_00490 PF07690 Major Facilitator Superfamily F0T03_00495 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded F0T03_00500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F0T03_00500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F0T03_00505 PF00230 Major intrinsic protein F0T03_00520 PF06005 Cell division protein ZapB F0T03_00525 PF03737 Aldolase/RraA F0T03_00530 PF01040 UbiA prenyltransferase family F0T03_00535 PF00004 ATPase family associated with various cellular activities (AAA) F0T03_00535 PF07724 AAA domain (Cdc48 subfamily) F0T03_00535 PF10431 C-terminal, D2-small domain, of ClpB protein F0T03_00540 PF00227 Proteasome subunit F0T03_00545 PF05036 Sporulation related domain F0T03_00550 PF00356 Bacterial regulatory proteins, lacI family F0T03_00555 PF17764 3′ DNA-binding domain (3′BD) F0T03_00555 PF00270 DEAD/DEAH box helicase F0T03_00555 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F0T03_00555 PF00271 Helicase conserved C-terminal domain F0T03_00555 PF18074 Primosomal protein N C-terminal domain F0T03_00560 PF01197 Ribosomal protein L31 F0T03_00565 PF01340 Met Apo-repressor, MetJ F0T03_00570 PF01053 Cys/Met metabolism PLP-dependent enzyme F0T03_00575 PF00696 Amino acid kinase family F0T03_00575 PF03447 Homoserine dehydrogenase, NAD binding domain F0T03_00575 PF00742 Homoserine dehydrogenase F0T03_00580 PF02219 Methylenetetrahydrofolate reductase F0T03_00590 PF00311 Phosphoenolpyruvate carboxylase F0T03_00595 PF07687 Peptidase dimerisation domain F0T03_00595 PF01546 Peptidase family M20/M25/M40 F0T03_00600 PF01118 Semialdehyde dehydrogenase, NAD binding domain F0T03_00600 PF02774 Semialdehyde dehydrogenase, dimerisation domain F0T03_00605 PF00696 Amino acid kinase family F0T03_00610 PF00206 Lyase F0T03_00610 PF14698 Argininosuccinate lyase C-terminal F0T03_00615 PF07715 TonB-dependent Receptor Plug Domain F0T03_00615 PF00593 TonB dependent receptor F0T03_00630 PF00664 ABC transporter transmembrane region F0T03_00630 PF00005 ABC transporter F0T03_00635 PF00529 HlyD membrane-fusion protein of T1SS F0T03_00645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F0T03_00645 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_00650 PF00462 Glutaredoxin F0T03_00650 PF08534 Redoxin F0T03_00655 PF03466 LysR substrate binding domain F0T03_00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_00660 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_00660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F0T03_00665 PF00440 Bacterial regulatory proteins, tetR family F0T03_00670 PF07226 Protein of unknown function (DUF1422) F0T03_00675 PF05958 tRNA (Uracil-5-)-methyltransferase F0T03_00680 PF07715 TonB-dependent Receptor Plug Domain F0T03_00680 PF00593 TonB dependent receptor F0T03_00685 PF01177 Asp/Glu/Hydantoin racemase F0T03_00730 PF13407 Periplasmic binding protein domain F0T03_00735 PF00005 ABC transporter F0T03_00740 PF02653 Branched-chain amino acid transport system / permease component F0T03_00745 PF02653 Branched-chain amino acid transport system / permease component F0T03_00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_00750 PF03466 LysR substrate binding domain F0T03_00755 PF04219 Protein of unknown function, DUF F0T03_00760 PF01078 Magnesium chelatase, subunit ChlI F0T03_00760 PF13335 Magnesium chelatase, subunit ChlI C-terminal F0T03_00765 PF08046 IlvGEDA operon leader peptide F0T03_00770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0T03_00770 PF00205 Thiamine pyrophosphate enzyme, central domain F0T03_00770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0T03_00780 PF01063 Amino-transferase class IV F0T03_00785 PF00920 Dehydratase family F0T03_00790 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_00790 PF00585 C-terminal regulatory domain of Threonine dehydratase F0T03_00795 PF03466 LysR substrate binding domain F0T03_00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_00800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F0T03_00800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F0T03_00810 PF02753 Pili assembly chaperone PapD, C-terminal domain F0T03_00810 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F0T03_00820 PF13953 PapC C-terminal domain F0T03_00820 PF13954 PapC N-terminal domain F0T03_00820 PF00577 Outer membrane usher protein F0T03_00825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F0T03_00825 PF02753 Pili assembly chaperone PapD, C-terminal domain F0T03_00840 PF13361 UvrD-like helicase C-terminal domain F0T03_00840 PF00580 UvrD/REP helicase N-terminal domain F0T03_00845 PF00295 Glycosyl hydrolases family 28 F0T03_00850 PF02541 Ppx/GppA phosphatase family F0T03_00855 PF00270 DEAD/DEAH box helicase F0T03_00855 PF00271 Helicase conserved C-terminal domain F0T03_00860 PF00085 Thioredoxin F0T03_00865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F0T03_00865 PF07497 Rho termination factor, RNA-binding domain F0T03_00865 PF07498 Rho termination factor, N-terminal domain F0T03_00870 PF00953 Glycosyl transferase family 4 F0T03_00875 PF02706 Chain length determinant protein F0T03_00880 PF02350 UDP-N-acetylglucosamine 2-epimerase F0T03_00885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F0T03_00885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F0T03_00885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F0T03_00890 PF16363 GDP-mannose 4,6 dehydratase F0T03_00895 PF00483 Nucleotidyl transferase F0T03_00905 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F0T03_00910 PF01943 Polysaccharide biosynthesis protein F0T03_00915 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 F0T03_00920 PF06899 WzyE protein, O-antigen assembly polymerase F0T03_00925 PF03808 Glycosyl transferase WecB/TagA/CpsF family F0T03_00930 PF00324 Amino acid permease F0T03_00955 PF07719 Tetratricopeptide repeat F0T03_00955 PF07219 HemY protein N-terminus F0T03_00960 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase F0T03_00965 PF02602 Uroporphyrinogen-III synthase HemD F0T03_00970 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F0T03_00970 PF03900 Porphobilinogen deaminase, C-terminal domain F0T03_00975 PF01295 Adenylate cyclase, class-I F0T03_00975 PF12633 Adenylate cyclase NT domain F0T03_00980 PF01491 Frataxin-like domain F0T03_00985 PF13627 Prokaryotic lipoprotein-attachment site F0T03_00990 PF01678 Diaminopimelate epimerase F0T03_00995 PF04340 Protein of unknown function, DUF484 F0T03_01000 PF00589 Phage integrase family F0T03_01000 PF02899 Phage integrase, N-terminal SAM-like domain F0T03_01005 PF13419 Haloacid dehalogenase-like hydrolase F0T03_01010 PF00580 UvrD/REP helicase N-terminal domain F0T03_01010 PF13361 UvrD-like helicase C-terminal domain F0T03_01025 PF09370 Phosphoenolpyruvate hydrolase-like F0T03_01035 PF01544 CorA-like Mg2+ transporter protein F0T03_01040 PF00892 EamA-like transporter family F0T03_01045 PF03061 Thioesterase superfamily F0T03_01050 PF02253 Phospholipase A1 F0T03_01055 PF09382 RQC domain F0T03_01055 PF00271 Helicase conserved C-terminal domain F0T03_01055 PF00270 DEAD/DEAH box helicase F0T03_01055 PF00570 HRDC domain F0T03_01055 PF16124 RecQ zinc-binding F0T03_01060 PF01810 LysE type translocator F0T03_01065 PF01810 LysE type translocator F0T03_01070 PF12146 Serine aminopeptidase, S33 F0T03_01080 PF03009 Glycerophosphoryl diester phosphodiesterase family F0T03_01085 PF07690 Major Facilitator Superfamily F0T03_01090 PF04324 BFD-like [2Fe-2S] binding domain F0T03_01090 PF01266 FAD dependent oxidoreductase F0T03_01095 PF00890 FAD binding domain F0T03_01100 PF13183 4Fe-4S dicluster domain F0T03_01100 PF02754 Cysteine-rich domain F0T03_01105 PF08786 DcrB F0T03_01110 PF02592 Putative vitamin uptake transporter F0T03_01115 PF01206 Sulfurtransferase TusA F0T03_01120 PF00403 Heavy-metal-associated domain F0T03_01125 PF07947 YhhN family F0T03_01140 PF06611 Protein of unknown function (DUF1145) F0T03_01150 PF02881 SRP54-type protein, helical bundle domain F0T03_01150 PF00448 SRP54-type protein, GTPase domain F0T03_01155 PF00005 ABC transporter F0T03_01160 PF02687 FtsX-like permease family F0T03_01160 PF18075 FtsX extracellular domain F0T03_01165 PF00140 Sigma-70 factor, region 1.2 F0T03_01165 PF04542 Sigma-70 region 2 F0T03_01165 PF04545 Sigma-70, region 4 F0T03_01170 PF12568 Acetyltransferase (GNAT) domain, PanZ F0T03_01175 PF13458 Periplasmic binding protein F0T03_01180 PF02653 Branched-chain amino acid transport system / permease component F0T03_01185 PF02653 Branched-chain amino acid transport system / permease component F0T03_01185 PF11862 Domain of unknown function (DUF3382) F0T03_01190 PF00005 ABC transporter F0T03_01190 PF12399 Branched-chain amino acid ATP-binding cassette transporter F0T03_01195 PF00005 ABC transporter F0T03_01230 PF13416 Bacterial extracellular solute-binding protein F0T03_01235 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_01240 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_01245 PF17912 MalK OB fold domain F0T03_01245 PF00005 ABC transporter F0T03_01250 PF03009 Glycerophosphoryl diester phosphodiesterase family F0T03_01255 PF03547 Membrane transport protein F0T03_01260 PF00892 EamA-like transporter family F0T03_01265 PF03466 LysR substrate binding domain F0T03_01265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_01270 PF01717 Cobalamin-independent synthase, Catalytic domain F0T03_01270 PF08267 Cobalamin-independent synthase, N-terminal domain F0T03_01275 PF01738 Dienelactone hydrolase family F0T03_01280 PF01048 Phosphorylase superfamily F0T03_01290 PF02554 Carbon starvation protein CstA F0T03_01290 PF13722 5TM C-terminal transporter carbon starvation CstA F0T03_01295 PF09335 SNARE associated Golgi protein F0T03_01300 PF02646 RmuC family F0T03_01305 PF01209 ubiE/COQ5 methyltransferase family F0T03_01310 PF02036 SCP-2 sterol transfer family F0T03_01315 PF03109 ABC1 family F0T03_01320 PF02416 mttA/Hcf106 family F0T03_01330 PF00902 Sec-independent protein translocase protein (TatC) F0T03_01335 PF01026 TatD related DNase F0T03_01340 PF00490 Delta-aminolevulinic acid dehydratase F0T03_01345 PF02357 Transcription termination factor nusG F0T03_01350 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F0T03_01355 PF00175 Oxidoreductase NAD-binding domain F0T03_01355 PF00970 Oxidoreductase FAD-binding domain F0T03_01360 PF02803 Thiolase, C-terminal domain F0T03_01360 PF00108 Thiolase, N-terminal domain F0T03_01365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F0T03_01365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F0T03_01365 PF00378 Enoyl-CoA hydratase/isomerase F0T03_01370 PF00557 Metallopeptidase family M24 F0T03_01375 PF01205 Uncharacterized protein family UPF0029 F0T03_01375 PF09186 Domain of unknown function (DUF1949) F0T03_01380 PF02386 Cation transport protein F0T03_01385 PF12724 Flavodoxin domain F0T03_01420 PF00474 Sodium:solute symporter family F0T03_01425 PF04341 Protein of unknown function, DUF485 F0T03_01430 PF13193 AMP-binding enzyme C-terminal domain F0T03_01430 PF16177 Acetyl-coenzyme A synthetase N-terminus F0T03_01430 PF00501 AMP-binding enzyme F0T03_01435 PF00375 Sodium:dicarboxylate symporter family F0T03_01440 PF00072 Response regulator receiver domain F0T03_01440 PF00196 Bacterial regulatory proteins, luxR family F0T03_01445 PF00512 His Kinase A (phospho-acceptor) domain F0T03_01445 PF00072 Response regulator receiver domain F0T03_01445 PF01627 Hpt domain F0T03_01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_01445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F0T03_01445 PF00672 HAMP domain F0T03_01475 PF03433 EspA-like secreted protein F0T03_01485 PF04888 Secretion system effector C (SseC) like family F0T03_01490 PF05802 Enterobacterial EspB protein F0T03_01510 PF12833 Helix-turn-helix domain F0T03_01510 PF14525 AraC-binding-like domain F0T03_01530 PF01514 Secretory protein of YscJ/FliF family F0T03_01545 PF07201 HrpJ-like domain F0T03_01555 PF00771 FHIPEP family F0T03_01560 PF18269 T3SS EscN ATPase C-terminal domain F0T03_01560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F0T03_01575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F0T03_01580 PF00813 FliP family F0T03_01585 PF01313 Bacterial export proteins, family 3 F0T03_01590 PF01311 Bacterial export proteins, family 1 F0T03_01595 PF01312 FlhB HrpN YscU SpaS Family F0T03_01600 PF04143 Sulphur transport F0T03_01605 PF01206 Sulfurtransferase TusA F0T03_01610 PF12794 Mechanosensitive ion channel inner membrane domain 1 F0T03_01610 PF12795 Mechanosensitive ion channel porin domain F0T03_01610 PF00924 Mechanosensitive ion channel F0T03_01615 PF00593 TonB dependent receptor F0T03_01615 PF07715 TonB-dependent Receptor Plug Domain F0T03_01620 PF00266 Aminotransferase class-V F0T03_01640 PF00899 ThiF family F0T03_01640 PF00581 Rhodanese-like domain F0T03_01650 PF00155 Aminotransferase class I and II F0T03_01650 PF00392 Bacterial regulatory proteins, gntR family F0T03_01655 PF00005 ABC transporter F0T03_01660 PF01032 FecCD transport family F0T03_01665 PF01497 Periplasmic binding protein F0T03_01670 PF05171 Haemin-degrading HemS.ChuX domain F0T03_01675 PF00593 TonB dependent receptor F0T03_01675 PF07715 TonB-dependent Receptor Plug Domain F0T03_01680 PF10636 Hemin uptake protein hemP F0T03_01690 PF06228 Haem utilisation ChuX/HutX F0T03_01695 PF04055 Radical SAM superfamily F0T03_01700 PF01738 Dienelactone hydrolase family F0T03_01705 PF00106 short chain dehydrogenase F0T03_01725 PF08479 POTRA domain, ShlB-type F0T03_01725 PF17287 POTRA domain F0T03_01725 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB F0T03_01730 PF04829 Pre-toxin domain with VENN motif F0T03_01730 PF13018 Extended Signal Peptide of Type V secretion system F0T03_01730 PF13332 Hemagglutinin repeat F0T03_01730 PF05860 haemagglutination activity domain F0T03_01780 PF04829 Pre-toxin domain with VENN motif F0T03_01780 PF13018 Extended Signal Peptide of Type V secretion system F0T03_01780 PF13332 Hemagglutinin repeat F0T03_01780 PF05860 haemagglutination activity domain F0T03_01840 PF13614 AAA domain F0T03_01850 PF00772 DnaB-like helicase N terminal domain F0T03_01850 PF03796 DnaB-like helicase C terminal domain F0T03_01885 PF01751 Toprim domain F0T03_01885 PF01131 DNA topoisomerase F0T03_01950 PF13614 AAA domain F0T03_02010 PF00271 Helicase conserved C-terminal domain F0T03_02050 PF06406 StbA protein F0T03_02075 PF04002 RadC-like JAB domain F0T03_02080 PF03230 Antirestriction protein F0T03_02105 PF06755 CbtA_toxin of type IV toxin-antitoxin system F0T03_02120 PF00394 Multicopper oxidase F0T03_02120 PF07732 Multicopper oxidase F0T03_02120 PF10518 TAT (twin-arginine translocation) pathway signal sequence F0T03_02120 PF07731 Multicopper oxidase F0T03_02135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_02135 PF00672 HAMP domain F0T03_02135 PF00512 His Kinase A (phospho-acceptor) domain F0T03_02140 PF00486 Transcriptional regulatory protein, C terminal F0T03_02140 PF00072 Response regulator receiver domain F0T03_02145 PF05425 Copper resistance protein D F0T03_02150 PF04234 CopC domain F0T03_02155 PF05275 Copper resistance protein B precursor (CopB) F0T03_02160 PF00394 Multicopper oxidase F0T03_02160 PF07732 Multicopper oxidase F0T03_02160 PF07731 Multicopper oxidase F0T03_02175 PF01551 Peptidase family M23 F0T03_02175 PF01476 LysM domain F0T03_02175 PF08525 Opacity-associated protein A N-terminal motif F0T03_02185 PF04945 YHS domain F0T03_02195 PF00873 AcrB/AcrD/AcrF family F0T03_02200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_02205 PF11604 Copper binding periplasmic protein CusF F0T03_02210 PF02321 Outer membrane efflux protein F0T03_02220 PF00486 Transcriptional regulatory protein, C terminal F0T03_02220 PF00072 Response regulator receiver domain F0T03_02225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_02225 PF00672 HAMP domain F0T03_02225 PF00512 His Kinase A (phospho-acceptor) domain F0T03_02240 PF02899 Phage integrase, N-terminal SAM-like domain F0T03_02240 PF00589 Phage integrase family F0T03_02255 PF03328 HpcH/HpaI aldolase/citrate lyase family F0T03_02260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F0T03_02260 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F0T03_02265 PF02595 Glycerate kinase family F0T03_02270 PF17853 GGDEF-like domain F0T03_02270 PF13556 PucR C-terminal helix-turn-helix domain F0T03_02270 PF05651 Putative sugar diacid recognition F0T03_02280 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_02280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F0T03_02280 PF13247 4Fe-4S dicluster domain F0T03_02285 PF01568 Molydopterin dinucleotide binding domain F0T03_02285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F0T03_02285 PF00384 Molybdopterin oxidoreductase F0T03_02290 PF11412 Disulphide bond corrector protein DsbC F0T03_02290 PF02683 Cytochrome C biogenesis protein transmembrane region F0T03_02295 PF03091 CutA1 divalent ion tolerance protein F0T03_02300 PF03605 Anaerobic c4-dicarboxylate membrane transporter F0T03_02305 PF10415 Fumarase C C-terminus F0T03_02305 PF00206 Lyase F0T03_02310 PF04186 FxsA cytoplasmic membrane protein F0T03_02315 PF00166 Chaperonin 10 Kd subunit F0T03_02320 PF00118 TCP-1/cpn60 chaperonin family F0T03_02330 PF13698 Domain of unknown function (DUF4156) F0T03_02335 PF04055 Radical SAM superfamily F0T03_02340 PF01132 Elongation factor P (EF-P) OB domain F0T03_02340 PF08207 Elongation factor P (EF-P) KOW-like domain F0T03_02340 PF09285 Elongation factor P, C-terminal F0T03_02345 PF08085 Entericidin EcnA/B family F0T03_02350 PF00893 Small Multidrug Resistance protein F0T03_02355 PF08212 Lipocalin-like domain F0T03_02360 PF02313 Fumarate reductase subunit D F0T03_02365 PF02300 Fumarate reductase subunit C F0T03_02370 PF13183 4Fe-4S dicluster domain F0T03_02370 PF13085 2Fe-2S iron-sulfur cluster binding domain F0T03_02375 PF00890 FAD binding domain F0T03_02375 PF02910 Fumarate reductase flavoprotein C-term F0T03_02380 PF00152 tRNA synthetases class II (D, K and N) F0T03_02385 PF12795 Mechanosensitive ion channel porin domain F0T03_02385 PF00924 Mechanosensitive ion channel F0T03_02385 PF12794 Mechanosensitive ion channel inner membrane domain 1 F0T03_02390 PF02666 Phosphatidylserine decarboxylase F0T03_02395 PF03193 RsgA GTPase F0T03_02400 PF00929 Exonuclease F0T03_02425 PF08331 Domain of unknown function (DUF1730) F0T03_02430 PF03853 YjeF-related protein N-terminus F0T03_02430 PF01256 Carbohydrate kinase F0T03_02435 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE F0T03_02440 PF01520 N-acetylmuramoyl-L-alanine amidase F0T03_02445 PF08676 MutL C terminal dimerisation domain F0T03_02445 PF01119 DNA mismatch repair protein, C-terminal domain F0T03_02455 PF17209 Hfq protein F0T03_02460 PF01926 50S ribosome-binding GTPase F0T03_02460 PF13167 GTP-binding GTPase N-terminal F0T03_02460 PF16360 GTP-binding GTPase Middle Region F0T03_02465 PF01145 SPFH domain / Band 7 family F0T03_02465 PF12221 Bacterial membrane protein N terminal F0T03_02470 PF01145 SPFH domain / Band 7 family F0T03_02475 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) F0T03_02480 PF00709 Adenylosuccinate synthetase F0T03_02485 PF02082 Transcriptional regulator F0T03_02490 PF08461 Ribonuclease R winged-helix domain F0T03_02490 PF00773 RNB domain F0T03_02490 PF08206 Ribonuclease B OB domain F0T03_02490 PF00575 S1 RNA binding domain F0T03_02490 PF17876 Cold shock domain F0T03_02495 PF00588 SpoU rRNA Methylase family F0T03_02495 PF08032 RNA 2'-O ribose methyltransferase substrate binding F0T03_02500 PF18158 Adaptive response protein AidB N-terminal domain F0T03_02500 PF02770 Acyl-CoA dehydrogenase, middle domain F0T03_02500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F0T03_02505 PF07338 Protein of unknown function (DUF1471) F0T03_02510 PF00326 Prolyl oligopeptidase family F0T03_02525 PF01250 Ribosomal protein S6 F0T03_02530 PF00436 Single-strand binding protein family F0T03_02535 PF01084 Ribosomal protein S18 F0T03_02540 PF03948 Ribosomal protein L9, C-terminal domain F0T03_02540 PF01281 Ribosomal protein L9, N-terminal domain F0T03_02550 PF08525 Opacity-associated protein A N-terminal motif F0T03_02550 PF04225 Opacity-associated protein A LysM-like domain F0T03_02555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F0T03_02555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0T03_02560 PF01814 Hemerythrin HHE cation binding domain F0T03_02560 PF04405 Domain of Unknown function (DUF542) F0T03_02565 PF02872 5'-nucleotidase, C-terminal domain F0T03_02565 PF00149 Calcineurin-like phosphoesterase F0T03_02570 PF00459 Inositol monophosphatase family F0T03_02575 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) F0T03_02580 PF06526 Protein of unknown function (DUF1107) F0T03_02585 PF03471 Transporter associated domain F0T03_02585 PF01595 Cyclin M transmembrane N-terminal domain F0T03_02585 PF00571 CBS domain F0T03_02590 PF01625 Peptide methionine sulfoxide reductase F0T03_02595 PF17243 POTRA domain TamA domain 1 F0T03_02595 PF07244 Surface antigen variable number repeat F0T03_02595 PF01103 Surface antigen F0T03_02600 PF04357 TamB, inner membrane protein subunit of TAM complex F0T03_02605 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like F0T03_02610 PF00719 Inorganic pyrophosphatase F0T03_02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_02615 PF02203 Tar ligand binding domain homologue F0T03_02615 PF00672 HAMP domain F0T03_02620 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain F0T03_02625 PF02875 Mur ligase family, glutamate ligase domain F0T03_02625 PF01225 Mur ligase family, catalytic domain F0T03_02625 PF08245 Mur ligase middle domain F0T03_02640 PF01316 Arginine repressor, DNA binding domain F0T03_02640 PF02863 Arginine repressor, C-terminal domain F0T03_02645 PF00056 lactate/malate dehydrogenase, NAD binding domain F0T03_02645 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F0T03_02650 PF13693 Winged helix-turn-helix DNA-binding F0T03_02660 PF00348 Polyprenyl synthetase F0T03_02665 PF00829 Ribosomal prokaryotic L21 protein F0T03_02670 PF01016 Ribosomal L27 protein F0T03_02675 PF00892 EamA-like transporter family F0T03_02680 PF01926 50S ribosome-binding GTPase F0T03_02680 PF01018 GTP1/OBG F0T03_02685 PF00512 His Kinase A (phospho-acceptor) domain F0T03_02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_02685 PF00672 HAMP domain F0T03_02690 PF00072 Response regulator receiver domain F0T03_02690 PF00486 Transcriptional regulatory protein, C terminal F0T03_02695 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family F0T03_02700 PF01272 Transcription elongation factor, GreA/GreB, C-term F0T03_02700 PF03449 Transcription elongation factor, N-terminal F0T03_02705 PF01985 CRS1 / YhbY (CRM) domain F0T03_02710 PF01728 FtsJ-like methyltransferase F0T03_02715 PF06480 FtsH Extracellular F0T03_02715 PF01434 Peptidase family M41 F0T03_02715 PF00004 ATPase family associated with various cellular activities (AAA) F0T03_02715 PF17862 AAA+ lid domain F0T03_02720 PF00809 Pterin binding enzyme F0T03_02725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F0T03_02725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F0T03_02725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F0T03_02725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F0T03_02730 PF03840 Preprotein translocase SecG subunit F0T03_02745 PF02576 RimP N-terminal domain F0T03_02745 PF17384 RimP C-terminal SH3 domain F0T03_02750 PF13184 NusA-like KH domain F0T03_02750 PF08529 NusA N-terminal domain F0T03_02750 PF00575 S1 RNA binding domain F0T03_02755 PF04760 Translation initiation factor IF-2, N-terminal region F0T03_02755 PF00009 Elongation factor Tu GTP binding domain F0T03_02755 PF11987 Translation-initiation factor 2 F0T03_02755 PF08364 Bacterial translation initiation factor IF-2 associated region F0T03_02755 PF03144 Elongation factor Tu domain 2 F0T03_02760 PF02033 Ribosome-binding factor A F0T03_02765 PF16198 tRNA pseudouridylate synthase B C-terminal domain F0T03_02765 PF01509 TruB family pseudouridylate synthase (N terminal domain) F0T03_02765 PF09157 Pseudouridine synthase II TruB, C-terminal F0T03_02770 PF00312 Ribosomal protein S15 F0T03_02775 PF00013 KH domain F0T03_02775 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F0T03_02775 PF01138 3' exoribonuclease family, domain 1 F0T03_02775 PF03725 3' exoribonuclease family, domain 2 F0T03_02775 PF00575 S1 RNA binding domain F0T03_02780 PF13181 Tetratricopeptide repeat F0T03_02780 PF07719 Tetratricopeptide repeat F0T03_02790 PF12343 Cold shock protein DEAD box A F0T03_02790 PF00270 DEAD/DEAH box helicase F0T03_02790 PF03880 DbpA RNA binding domain F0T03_02790 PF00271 Helicase conserved C-terminal domain F0T03_02795 PF00296 Luciferase-like monooxygenase F0T03_02810 PF03313 Serine dehydratase alpha chain F0T03_02835 PF13508 Acetyltransferase (GNAT) domain F0T03_02840 PF01541 GIY-YIG catalytic domain F0T03_02845 PF13520 Amino acid permease F0T03_02850 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F0T03_02850 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F0T03_02850 PF01276 Orn/Lys/Arg decarboxylase, major domain F0T03_02860 PF07940 Heparinase II/III-like protein F0T03_02860 PF05426 Alginate lyase F0T03_02870 PF13416 Bacterial extracellular solute-binding protein F0T03_02880 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_02885 PF00005 ABC transporter F0T03_02885 PF17912 MalK OB fold domain F0T03_02885 PF03459 TOBE domain F0T03_02900 PF13460 NAD(P)H-binding F0T03_02905 PF12706 Beta-lactamase superfamily domain F0T03_02915 PF07969 Amidohydrolase family F0T03_02920 PF00005 ABC transporter F0T03_02925 PF00005 ABC transporter F0T03_02930 PF06007 Phosphonate metabolism protein PhnJ F0T03_02935 PF05861 Bacterial phosphonate metabolism protein (PhnI) F0T03_02940 PF05845 Bacterial phosphonate metabolism protein (PhnH) F0T03_02945 PF06754 Phosphonate metabolism protein PhnG F0T03_02950 PF07702 UTRA domain F0T03_02950 PF00392 Bacterial regulatory proteins, gntR family F0T03_02960 PF13597 Anaerobic ribonucleoside-triphosphate reductase F0T03_02960 PF03477 ATP cone domain F0T03_02965 PF03466 LysR substrate binding domain F0T03_02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_02970 PF02525 Flavodoxin-like fold F0T03_02975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0T03_02975 PF00005 ABC transporter F0T03_02980 PF00005 ABC transporter F0T03_02980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0T03_02990 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_02995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_03000 PF04074 YhcH/YjgK/YiaL F0T03_03005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F0T03_03005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F0T03_03010 PF06877 Regulator of ribonuclease activity B F0T03_03020 PF00583 Acetyltransferase (GNAT) family F0T03_03025 PF00133 tRNA synthetases class I (I, L, M and V) F0T03_03025 PF10458 Valyl tRNA synthetase tRNA binding arm F0T03_03025 PF08264 Anticodon-binding domain of tRNA F0T03_03030 PF04364 DNA polymerase III chi subunit, HolC F0T03_03035 PF02789 Cytosol aminopeptidase family, N-terminal domain F0T03_03035 PF00883 Cytosol aminopeptidase family, catalytic domain F0T03_03040 PF03739 Lipopolysaccharide export system permease LptF/LptG F0T03_03045 PF03739 Lipopolysaccharide export system permease LptF/LptG F0T03_03055 PF00589 Phage integrase family F0T03_03055 PF13356 Arm DNA-binding domain F0T03_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_03065 PF00672 HAMP domain F0T03_03070 PF02086 D12 class N6 adenine-specific DNA methyltransferase F0T03_03120 PF13505 Outer membrane protein beta-barrel domain F0T03_03125 PF01926 50S ribosome-binding GTPase F0T03_03135 PF13280 WYL domain F0T03_03135 PF08220 DeoR-like helix-turn-helix domain F0T03_03150 PF06067 Domain of unknown function (DUF932) F0T03_03155 PF04002 RadC-like JAB domain F0T03_03160 PF06755 CbtA_toxin of type IV toxin-antitoxin system F0T03_03185 PF13333 Integrase core domain F0T03_03185 PF00665 Integrase core domain F0T03_03185 PF13276 HTH-like domain F0T03_03195 PF01527 Transposase F0T03_03205 PF00583 Acetyltransferase (GNAT) family F0T03_03220 PF10696 Protein of unknown function (DUF2501) F0T03_03225 PF08349 Protein of unknown function (DUF1722) F0T03_03230 PF03992 Antibiotic biosynthesis monooxygenase F0T03_03235 PF01791 DeoC/LacD family aldolase F0T03_03240 PF13407 Periplasmic binding protein domain F0T03_03245 PF02653 Branched-chain amino acid transport system / permease component F0T03_03250 PF02653 Branched-chain amino acid transport system / permease component F0T03_03255 PF00005 ABC transporter F0T03_03265 PF04198 Putative sugar-binding domain F0T03_03265 PF00325 Bacterial regulatory proteins, crp family F0T03_03270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F0T03_03270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F0T03_03275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F0T03_03285 PF13520 Amino acid permease F0T03_03300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_03305 PF00873 AcrB/AcrD/AcrF family F0T03_03310 PF00465 Iron-containing alcohol dehydrogenase F0T03_03315 PF02733 Dak1 domain F0T03_03320 PF02734 DAK2 domain F0T03_03325 PF03610 PTS system fructose IIA component F0T03_03325 PF05524 PEP-utilising enzyme, N-terminal F0T03_03325 PF00381 PTS HPr component phosphorylation site F0T03_03325 PF00391 PEP-utilising enzyme, mobile domain F0T03_03335 PF02543 Carbamoyltransferase N-terminus F0T03_03335 PF16861 Carbamoyltransferase C-terminus F0T03_03360 PF00989 PAS fold F0T03_03360 PF02954 Bacterial regulatory protein, Fis family F0T03_03360 PF00158 Sigma-54 interaction domain F0T03_03365 PF00356 Bacterial regulatory proteins, lacI family F0T03_03365 PF13407 Periplasmic binding protein domain F0T03_03370 PF08244 Glycosyl hydrolases family 32 C terminal F0T03_03370 PF00251 Glycosyl hydrolases family 32 N-terminal domain F0T03_03375 PF02378 Phosphotransferase system, EIIC F0T03_03375 PF00367 phosphotransferase system, EIIB F0T03_03380 PF02264 LamB porin F0T03_03380 PF11471 Maltoporin periplasmic N-terminal extension F0T03_03385 PF00294 pfkB family carbohydrate kinase F0T03_03395 PF00990 Diguanylate cyclase, GGDEF domain F0T03_03400 PF07256 Protein of unknown function (DUF1435) F0T03_03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_03420 PF03466 LysR substrate binding domain F0T03_03425 PF00248 Aldo/keto reductase family F0T03_03430 PF08468 Methyltransferase small domain N-terminal F0T03_03430 PF05175 Methyltransferase small domain F0T03_03435 PF03603 DNA polymerase III psi subunit F0T03_03440 PF00583 Acetyltransferase (GNAT) family F0T03_03445 PF16658 Class II release factor RF3, C-terminal domain F0T03_03445 PF00009 Elongation factor Tu GTP binding domain F0T03_03445 PF03144 Elongation factor Tu domain 2 F0T03_03450 PF04972 BON domain F0T03_03455 PF07043 Protein of unknown function (DUF1328) F0T03_03460 PF01734 Patatin-like phospholipase F0T03_03465 PF01026 TatD related DNase F0T03_03470 PF01773 Na+ dependent nucleoside transporter N-terminus F0T03_03470 PF07662 Na+ dependent nucleoside transporter C-terminus F0T03_03470 PF07670 Nucleoside recognition F0T03_03475 PF01791 DeoC/LacD family aldolase F0T03_03480 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain F0T03_03480 PF02885 Glycosyl transferase family, helical bundle domain F0T03_03480 PF00591 Glycosyl transferase family, a/b domain F0T03_03485 PF01676 Metalloenzyme superfamily F0T03_03490 PF01048 Phosphorylase superfamily F0T03_03495 PF10144 Bacterial virulence factor haemolysin F0T03_03500 PF18429 Domain of unknown function (DUF5609) F0T03_03505 PF18073 Rubredoxin metal binding domain F0T03_03510 PF13521 AAA domain F0T03_03510 PF01381 Helix-turn-helix F0T03_03515 PF00107 Zinc-binding dehydrogenase F0T03_03515 PF08240 Alcohol dehydrogenase GroES-like domain F0T03_03520 PF03466 LysR substrate binding domain F0T03_03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_03525 PF00005 ABC transporter F0T03_03525 PF12848 ABC transporter F0T03_03530 PF00691 OmpA family F0T03_03535 PF00990 Diguanylate cyclase, GGDEF domain F0T03_03535 PF17152 Periplasmic sensor domain F0T03_03545 PF00689 Cation transporting ATPase, C-terminus F0T03_03545 PF00690 Cation transporter/ATPase, N-terminus F0T03_03550 PF01464 Transglycosylase SLT domain F0T03_03550 PF14718 Soluble lytic murein transglycosylase L domain F0T03_03555 PF01371 Trp repressor protein F0T03_03560 PF01931 Protein of unknown function DUF84 F0T03_03565 PF00300 Histidine phosphatase superfamily (branch 1) F0T03_03570 PF12833 Helix-turn-helix domain F0T03_03570 PF06445 GyrI-like small molecule binding domain F0T03_03575 PF05981 CreA protein F0T03_03580 PF00486 Transcriptional regulatory protein, C terminal F0T03_03580 PF00072 Response regulator receiver domain F0T03_03585 PF08254 Threonine leader peptide F0T03_03590 PF00696 Amino acid kinase family F0T03_03590 PF03447 Homoserine dehydrogenase, NAD binding domain F0T03_03590 PF01842 ACT domain F0T03_03590 PF13840 ACT domain F0T03_03590 PF00742 Homoserine dehydrogenase F0T03_03595 PF08544 GHMP kinases C terminal F0T03_03595 PF00288 GHMP kinases N terminal domain F0T03_03600 PF14821 Threonine synthase N terminus F0T03_03600 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_03605 PF03883 Peroxide stress protein YaaA F0T03_03615 PF00923 Transaldolase/Fructose-6-phosphate aldolase F0T03_03620 PF00994 Probable molybdopterin binding domain F0T03_03625 PF07690 Major Facilitator Superfamily F0T03_03635 PF01184 GPR1/FUN34/yaaH family F0T03_03640 PF00012 Hsp70 protein F0T03_03645 PF00226 DnaJ domain F0T03_03645 PF00684 DnaJ central domain F0T03_03645 PF01556 DnaJ C terminal domain F0T03_03650 PF06965 Na+/H+ antiporter 1 F0T03_03655 PF03466 LysR substrate binding domain F0T03_03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_03660 PF01649 Ribosomal protein S20 F0T03_03675 PF01687 Riboflavin kinase F0T03_03675 PF06574 FAD synthetase F0T03_03680 PF06827 Zinc finger found in FPG and IleRS F0T03_03680 PF00133 tRNA synthetases class I (I, L, M and V) F0T03_03680 PF08264 Anticodon-binding domain of tRNA F0T03_03685 PF01252 Signal peptidase (SPase) II F0T03_03690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0T03_03695 PF02401 LytB protein F0T03_03700 PF05173 Dihydrodipicolinate reductase, C-terminus F0T03_03700 PF01113 Dihydrodipicolinate reductase, N-terminus F0T03_03705 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F0T03_03705 PF00117 Glutamine amidotransferase class-I F0T03_03710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F0T03_03710 PF02142 MGS-like domain F0T03_03710 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F0T03_03715 PF01810 LysE type translocator F0T03_03720 PF06738 Putative threonine/serine exporter F0T03_03725 PF12821 Threonine/Serine exporter, ThrE F0T03_03730 PF00186 Dihydrofolate reductase F0T03_03740 PF00149 Calcineurin-like phosphoesterase F0T03_03745 PF04379 ApaG domain F0T03_03750 PF00398 Ribosomal RNA adenine dimethylase F0T03_03755 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F0T03_03760 PF00639 PPIC-type PPIASE domain F0T03_03760 PF09312 SurA N-terminal domain F0T03_03765 PF04453 LPS transport system D F0T03_03765 PF03968 OstA-like protein F0T03_03770 PF00226 DnaJ domain F0T03_03770 PF05099 Tellurite resistance protein TerB F0T03_03780 PF00849 RNA pseudouridylate synthase F0T03_03785 PF18339 RapA N-terminal Tudor like domain 1 F0T03_03785 PF18337 RapA N-terminal Tudor like domain F0T03_03785 PF00271 Helicase conserved C-terminal domain F0T03_03785 PF12137 RNA polymerase recycling family C-terminal F0T03_03785 PF00176 SNF2 family N-terminal domain F0T03_03790 PF03104 DNA polymerase family B, exonuclease domain F0T03_03790 PF00136 DNA polymerase family B F0T03_03795 PF09335 SNARE associated Golgi protein F0T03_03800 PF00005 ABC transporter F0T03_03805 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_03815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_03815 PF12793 Sugar transport-related sRNA regulator N-term F0T03_03820 PF04055 Radical SAM superfamily F0T03_03830 PF07690 Major Facilitator Superfamily F0T03_03835 PF03222 Tryptophan/tyrosine permease family F0T03_03840 PF01212 Beta-eliminating lyase F0T03_03850 PF00694 Aconitase C-terminal domain F0T03_03855 PF00330 Aconitase family (aconitate hydratase) F0T03_03860 PF00180 Isocitrate/isopropylmalate dehydrogenase F0T03_03865 PF08502 LeuA allosteric (dimerisation) domain F0T03_03865 PF00682 HMGL-like F0T03_03875 PF03466 LysR substrate binding domain F0T03_03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_03880 PF00501 AMP-binding enzyme F0T03_03885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0T03_03885 PF00205 Thiamine pyrophosphate enzyme, central domain F0T03_03885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0T03_03890 PF10369 Small subunit of acetolactate synthase F0T03_03895 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F0T03_03895 PF00356 Bacterial regulatory proteins, lacI family F0T03_03900 PF06610 L-alanine exporter F0T03_03905 PF02381 MraZ protein, putative antitoxin-like F0T03_03910 PF01795 MraW methylase family F0T03_03915 PF04999 Cell division protein FtsL F0T03_03920 PF00905 Penicillin binding protein transpeptidase domain F0T03_03920 PF03717 Penicillin-binding Protein dimerisation domain F0T03_03925 PF08245 Mur ligase middle domain F0T03_03925 PF01225 Mur ligase family, catalytic domain F0T03_03925 PF02875 Mur ligase family, glutamate ligase domain F0T03_03930 PF02875 Mur ligase family, glutamate ligase domain F0T03_03930 PF08245 Mur ligase middle domain F0T03_03930 PF01225 Mur ligase family, catalytic domain F0T03_03935 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 F0T03_03935 PF00953 Glycosyl transferase family 4 F0T03_03940 PF08245 Mur ligase middle domain F0T03_03940 PF02875 Mur ligase family, glutamate ligase domain F0T03_03945 PF01098 Cell cycle protein F0T03_03950 PF04101 Glycosyltransferase family 28 C-terminal domain F0T03_03950 PF03033 Glycosyltransferase family 28 N-terminal domain F0T03_03955 PF02875 Mur ligase family, glutamate ligase domain F0T03_03955 PF01225 Mur ligase family, catalytic domain F0T03_03955 PF08245 Mur ligase middle domain F0T03_03960 PF01820 D-ala D-ala ligase N-terminus F0T03_03960 PF07478 D-ala D-ala ligase C-terminus F0T03_03965 PF03799 Cell division protein FtsQ F0T03_03965 PF08478 POTRA domain, FtsQ-type F0T03_03970 PF02491 SHS2 domain inserted in FTSA F0T03_03975 PF12327 FtsZ family, C-terminal domain F0T03_03975 PF00091 Tubulin/FtsZ family, GTPase domain F0T03_03980 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F0T03_03990 PF06558 Secretion monitor precursor protein (SecM) F0T03_03995 PF02810 SEC-C motif F0T03_03995 PF07517 SecA DEAD-like domain F0T03_03995 PF07516 SecA Wing and Scaffold domain F0T03_03995 PF01043 SecA preprotein cross-linking domain F0T03_04005 PF00293 NUDIX domain F0T03_04010 PF03884 DNA gyrase inhibitor YacG F0T03_04015 PF07072 Cell division protein F0T03_04020 PF01121 Dephospho-CoA kinase F0T03_04030 PF00478 IMP dehydrogenase / GMP reductase domain F0T03_04040 PF00482 Type II secretion system (T2SS), protein F F0T03_04045 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F0T03_04045 PF00437 Type II/IV secretion system protein F0T03_04050 PF07963 Prokaryotic N-terminal methylation motif F0T03_04055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F0T03_04055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F0T03_04060 PF01510 N-acetylmuramoyl-L-alanine amidase F0T03_04065 PF17113 Regulatory signalling modulator protein AmpE F0T03_04070 PF00324 Amino acid permease F0T03_04080 PF00392 Bacterial regulatory proteins, gntR family F0T03_04080 PF07729 FCD domain F0T03_04085 PF00456 Transketolase, thiamine diphosphate binding domain F0T03_04085 PF17831 Pyruvate dehydrogenase E1 component middle domain F0T03_04090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F0T03_04090 PF00364 Biotin-requiring enzyme F0T03_04090 PF02817 e3 binding domain F0T03_04095 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_04095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F0T03_04105 PF12833 Helix-turn-helix domain F0T03_04105 PF01965 DJ-1/PfpI family F0T03_04110 PF07715 TonB-dependent Receptor Plug Domain F0T03_04110 PF00593 TonB dependent receptor F0T03_04115 PF06434 Aconitate hydratase 2 N-terminus F0T03_04115 PF11791 Aconitate B N-terminal domain F0T03_04115 PF00330 Aconitase family (aconitate hydratase) F0T03_04120 PF06062 Uncharacterised protein family (UPF0231) F0T03_04125 PF00892 EamA-like transporter family F0T03_04130 PF02675 S-adenosylmethionine decarboxylase F0T03_04135 PF17284 Spermidine synthase tetramerisation domain F0T03_04140 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) F0T03_04145 PF10518 TAT (twin-arginine translocation) pathway signal sequence F0T03_04145 PF00394 Multicopper oxidase F0T03_04145 PF07731 Multicopper oxidase F0T03_04145 PF07732 Multicopper oxidase F0T03_04150 PF00156 Phosphoribosyl transferase domain F0T03_04155 PF00484 Carbonic anhydrase F0T03_04160 PF00005 ABC transporter F0T03_04165 PF01061 ABC-2 type transporter F0T03_04170 PF01522 Polysaccharide deacetylase F0T03_04175 PF02261 Aspartate decarboxylase F0T03_04180 PF02569 Pantoate-beta-alanine ligase F0T03_04185 PF02548 Ketopantoate hydroxymethyltransferase F0T03_04190 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F0T03_04195 PF01743 Poly A polymerase head domain F0T03_04195 PF12626 Polymerase A arginine-rich C-terminus F0T03_04195 PF12627 Probable RNA and SrmB- binding site of polymerase A F0T03_04200 PF00749 tRNA synthetases class I (E and Q), catalytic domain F0T03_04205 PF01258 Prokaryotic dksA/traR C4-type zinc finger F0T03_04210 PF17746 SfsA N-terminal OB domain F0T03_04210 PF03749 Sugar fermentation stimulation protein RE domain F0T03_04215 PF02834 LigT like Phosphoesterase F0T03_04220 PF00270 DEAD/DEAH box helicase F0T03_04220 PF00271 Helicase conserved C-terminal domain F0T03_04220 PF08482 ATP-dependent helicase C-terminal F0T03_04220 PF04408 Helicase associated domain (HA2) F0T03_04225 PF00912 Transglycosylase F0T03_04225 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal F0T03_04225 PF14814 Bifunctional transglycosylase second domain F0T03_04225 PF00905 Penicillin binding protein transpeptidase domain F0T03_04230 PF00005 ABC transporter F0T03_04235 PF01497 Periplasmic binding protein F0T03_04240 PF01032 FecCD transport family F0T03_04245 PF00202 Aminotransferase class-III F0T03_04250 PF00654 Voltage gated chloride channel F0T03_04255 PF01521 Iron-sulphur cluster biosynthesis F0T03_04265 PF03458 UPF0126 domain F0T03_04270 PF01497 Periplasmic binding protein F0T03_04275 PF01048 Phosphorylase superfamily F0T03_04280 PF13286 Phosphohydrolase-associated domain F0T03_04280 PF01966 HD domain F0T03_04285 PF00595 PDZ domain F0T03_04290 PF00672 HAMP domain F0T03_04290 PF00512 His Kinase A (phospho-acceptor) domain F0T03_04290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_04290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F0T03_04290 PF01627 Hpt domain F0T03_04290 PF00072 Response regulator receiver domain F0T03_04295 PF05958 tRNA (Uracil-5-)-methyltransferase F0T03_04295 PF01938 TRAM domain F0T03_04300 PF02824 TGS domain F0T03_04300 PF04607 Region found in RelA / SpoT proteins F0T03_04300 PF13291 ACT domain F0T03_04305 PF03819 MazG nucleotide pyrophosphohydrolase domain F0T03_04310 PF06418 CTP synthase N-terminus F0T03_04310 PF00117 Glutamine amidotransferase class-I F0T03_04315 PF00113 Enolase, C-terminal TIM barrel domain F0T03_04315 PF03952 Enolase, N-terminal domain F0T03_04320 PF00080 Copper/zinc superoxide dismutase (SODC) F0T03_04325 PF04055 Radical SAM superfamily F0T03_04330 PF01242 6-pyruvoyl tetrahydropterin synthase F0T03_04340 PF00175 Oxidoreductase NAD-binding domain F0T03_04340 PF00258 Flavodoxin F0T03_04340 PF00667 FAD binding domain F0T03_04345 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F0T03_04345 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F0T03_04350 PF01507 Phosphoadenosine phosphosulfate reductase family F0T03_04355 PF04389 Peptidase family M28 F0T03_04360 PF14824 Sirohaem biosynthesis protein central F0T03_04360 PF10414 Sirohaem synthase dimerisation region F0T03_04360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0T03_04365 PF01507 Phosphoadenosine phosphosulfate reductase family F0T03_04370 PF00009 Elongation factor Tu GTP binding domain F0T03_04380 PF12084 Protein of unknown function (DUF3561) F0T03_04385 PF00005 ABC transporter F0T03_04390 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_04395 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_04400 PF04977 Septum formation initiator F0T03_04405 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F0T03_04410 PF02542 YgbB family F0T03_04415 PF01142 tRNA pseudouridine synthase D (TruD) F0T03_04420 PF01975 Survival protein SurE F0T03_04430 PF01551 Peptidase family M23 F0T03_04430 PF01476 LysM domain F0T03_04435 PF00140 Sigma-70 factor, region 1.2 F0T03_04435 PF04545 Sigma-70, region 4 F0T03_04435 PF04542 Sigma-70 region 2 F0T03_04435 PF04539 Sigma-70 region 3 F0T03_04440 PF00488 MutS domain V F0T03_04440 PF05190 MutS family domain IV F0T03_04440 PF05192 MutS domain III F0T03_04440 PF05188 MutS domain II F0T03_04440 PF01624 MutS domain I F0T03_04455 PF00419 Fimbrial protein F0T03_04460 PF00419 Fimbrial protein F0T03_04465 PF00577 Outer membrane usher protein F0T03_04465 PF13954 PapC N-terminal domain F0T03_04465 PF13953 PapC C-terminal domain F0T03_04470 PF02753 Pili assembly chaperone PapD, C-terminal domain F0T03_04470 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F0T03_04485 PF00419 Fimbrial protein F0T03_04490 PF00419 Fimbrial protein F0T03_04505 PF00085 Thioredoxin F0T03_04505 PF01323 DSBA-like thioredoxin domain F0T03_04515 PF03412 Peptidase C39 family F0T03_04515 PF00664 ABC transporter transmembrane region F0T03_04515 PF00005 ABC transporter F0T03_04520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_04525 PF00005 ABC transporter F0T03_04525 PF02687 FtsX-like permease family F0T03_04525 PF12704 MacB-like periplasmic core domain F0T03_04530 PF02321 Outer membrane efflux protein F0T03_04535 PF00109 Beta-ketoacyl synthase, N-terminal domain F0T03_04535 PF02801 Beta-ketoacyl synthase, C-terminal domain F0T03_04555 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_04560 PF13018 Extended Signal Peptide of Type V secretion system F0T03_04560 PF03797 Autotransporter beta-domain F0T03_04560 PF16168 Adhesin of bacterial autotransporter system, probable stalk F0T03_04560 PF03212 Pertactin F0T03_04565 PF00034 Cytochrome c F0T03_04565 PF14376 Haem-binding domain F0T03_04565 PF03150 Di-haem cytochrome c peroxidase F0T03_04570 PF13378 Enolase C-terminal domain-like F0T03_04570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F0T03_04575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_04580 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_04590 PF00005 ABC transporter F0T03_04590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0T03_04595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0T03_04595 PF00005 ABC transporter F0T03_04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_04600 PF03466 LysR substrate binding domain F0T03_04605 PF02447 GntP family permease F0T03_04610 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_04620 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_04625 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_04630 PF00005 ABC transporter F0T03_04635 PF01546 Peptidase family M20/M25/M40 F0T03_04650 PF03144 Elongation factor Tu domain 2 F0T03_04650 PF00009 Elongation factor Tu GTP binding domain F0T03_04650 PF03764 Elongation factor G, domain IV F0T03_04650 PF00679 Elongation factor G C-terminus F0T03_04650 PF14492 Elongation Factor G, domain II F0T03_04655 PF01022 Bacterial regulatory protein, arsR family F0T03_04660 PF08240 Alcohol dehydrogenase GroES-like domain F0T03_04660 PF00107 Zinc-binding dehydrogenase F0T03_04665 PF03613 PTS system mannose/fructose/sorbose family IID component F0T03_04670 PF03609 PTS system sorbose-specific iic component F0T03_04675 PF03830 PTS system sorbose subfamily IIB component F0T03_04680 PF03610 PTS system fructose IIA component F0T03_04685 PF00106 short chain dehydrogenase F0T03_04690 PF13936 Helix-turn-helix domain F0T03_04690 PF04198 Putative sugar-binding domain F0T03_04695 PF00795 Carbon-nitrogen hydrolase F0T03_04715 PF00005 ABC transporter F0T03_04720 PF00005 ABC transporter F0T03_04725 PF11862 Domain of unknown function (DUF3382) F0T03_04725 PF02653 Branched-chain amino acid transport system / permease component F0T03_04730 PF02653 Branched-chain amino acid transport system / permease component F0T03_04735 PF13458 Periplasmic binding protein F0T03_04740 PF05683 Fumarase C-terminus F0T03_04740 PF05681 Fumarate hydratase (Fumerase) F0T03_04745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F0T03_04745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F0T03_04750 PF01261 Xylose isomerase-like TIM barrel F0T03_04755 PF02653 Branched-chain amino acid transport system / permease component F0T03_04760 PF02653 Branched-chain amino acid transport system / permease component F0T03_04765 PF00005 ABC transporter F0T03_04775 PF00455 DeoR C terminal sensor domain F0T03_04775 PF08220 DeoR-like helix-turn-helix domain F0T03_04780 PF00596 Class II Aldolase and Adducin N-terminal domain F0T03_04785 PF08220 DeoR-like helix-turn-helix domain F0T03_04785 PF00455 DeoR C terminal sensor domain F0T03_04790 PF05025 RbsD / FucU transport protein family F0T03_04795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F0T03_04795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F0T03_04800 PF07881 L-fucose isomerase, first N-terminal domain F0T03_04800 PF02952 L-fucose isomerase, C-terminal domain F0T03_04800 PF07882 L-fucose isomerase, second N-terminal domain F0T03_04805 PF07690 Major Facilitator Superfamily F0T03_04810 PF00596 Class II Aldolase and Adducin N-terminal domain F0T03_04815 PF00465 Iron-containing alcohol dehydrogenase F0T03_04820 PF00384 Molybdopterin oxidoreductase F0T03_04820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F0T03_04820 PF01568 Molydopterin dinucleotide binding domain F0T03_04825 PF13247 4Fe-4S dicluster domain F0T03_04825 PF12800 4Fe-4S binding domain F0T03_04830 PF04976 DMSO reductase anchor subunit (DmsC) F0T03_04835 PF02613 Nitrate reductase delta subunit F0T03_04845 PF00356 Bacterial regulatory proteins, lacI family F0T03_04855 PF00005 ABC transporter F0T03_04860 PF02653 Branched-chain amino acid transport system / permease component F0T03_04865 PF00456 Transketolase, thiamine diphosphate binding domain F0T03_04870 PF02780 Transketolase, C-terminal domain F0T03_04870 PF02779 Transketolase, pyrimidine binding domain F0T03_04875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F0T03_04875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F0T03_04890 PF07690 Major Facilitator Superfamily F0T03_04895 PF02464 Competence-damaged protein F0T03_04900 PF00154 recA bacterial DNA recombination protein F0T03_04905 PF02631 RecX family F0T03_04910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F0T03_04910 PF01411 tRNA synthetases class II (A) F0T03_04910 PF02272 DHHA1 domain F0T03_04915 PF02599 Global regulator protein family F0T03_04940 PF13419 Haloacid dehalogenase-like hydrolase F0T03_04945 PF09335 SNARE associated Golgi protein F0T03_04950 PF04262 Glutamate-cysteine ligase F0T03_04955 PF02664 S-Ribosylhomocysteinase (LuxS) F0T03_04960 PF00571 CBS domain F0T03_04960 PF03471 Transporter associated domain F0T03_04960 PF01595 Cyclin M transmembrane N-terminal domain F0T03_04965 PF01578 Cytochrome C assembly protein F0T03_04970 PF02978 Signal peptide binding domain F0T03_04970 PF02881 SRP54-type protein, helical bundle domain F0T03_04970 PF00448 SRP54-type protein, GTPase domain F0T03_04975 PF00886 Ribosomal protein S16 F0T03_04980 PF01782 RimM N-terminal domain F0T03_04980 PF05239 PRC-barrel domain F0T03_04985 PF01746 tRNA (Guanine-1)-methyltransferase F0T03_04990 PF01245 Ribosomal protein L19 F0T03_04995 PF04338 Protein of unknown function, DUF481 F0T03_05000 PF03605 Anaerobic c4-dicarboxylate membrane transporter F0T03_05005 PF04397 LytTr DNA-binding domain F0T03_05005 PF00072 Response regulator receiver domain F0T03_05010 PF00793 DAHP synthetase I family F0T03_05015 PF01817 Chorismate mutase type II F0T03_05015 PF02153 Prephenate dehydrogenase F0T03_05020 PF00800 Prephenate dehydratase F0T03_05020 PF01817 Chorismate mutase type II F0T03_05025 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F0T03_05030 PF13525 Outer membrane lipoprotein F0T03_05040 PF01479 S4 domain F0T03_05040 PF00849 RNA pseudouridylate synthase F0T03_05050 PF17871 AAA lid domain F0T03_05050 PF07724 AAA domain (Cdc48 subfamily) F0T03_05050 PF02861 Clp amino terminal domain, pathogenicity island component F0T03_05050 PF00004 ATPase family associated with various cellular activities (AAA) F0T03_05050 PF10431 C-terminal, D2-small domain, of ClpB protein F0T03_05085 PF00248 Aldo/keto reductase family F0T03_05095 PF03372 Endonuclease/Exonuclease/phosphatase family F0T03_05100 PF01476 LysM domain F0T03_05100 PF01464 Transglycosylase SLT domain F0T03_05105 PF00753 Metallo-beta-lactamase superfamily F0T03_05105 PF16123 Hydroxyacylglutathione hydrolase C-terminus F0T03_05110 PF08241 Methyltransferase domain F0T03_05115 PF00075 RNase H F0T03_05120 PF00929 Exonuclease F0T03_05130 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F0T03_05135 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_05140 PF00571 CBS domain F0T03_05140 PF00005 ABC transporter F0T03_05145 PF00268 Ribonucleotide reductase, small chain F0T03_05150 PF00317 Ribonucleotide reductase, all-alpha domain F0T03_05150 PF08343 Ribonucleotide reductase N-terminal F0T03_05150 PF02867 Ribonucleotide reductase, barrel domain F0T03_05155 PF07972 NrdI Flavodoxin like F0T03_05160 PF00462 Glutaredoxin F0T03_05165 PF02627 Carboxymuconolactone decarboxylase family F0T03_05170 PF00155 Aminotransferase class I and II F0T03_05170 PF00392 Bacterial regulatory proteins, gntR family F0T03_05175 PF05957 Bacterial protein of unknown function (DUF883) F0T03_05180 PF06392 Acid shock protein repeat F0T03_05190 PF12833 Helix-turn-helix domain F0T03_05195 PF09400 Protein of unknown function (DUF2002) F0T03_05200 PF06711 Protein of unknown function (DUF1198) F0T03_05210 PF00313 'Cold-shock' DNA-binding domain F0T03_05215 PF01965 DJ-1/PfpI family F0T03_05240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_05245 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_05250 PF12911 N-terminal TM domain of oligopeptide transport permease C F0T03_05250 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_05255 PF00005 ABC transporter F0T03_05270 PF00547 Urease, gamma subunit F0T03_05275 PF00699 Urease beta subunit F0T03_05280 PF00449 Urease alpha-subunit, N-terminal domain F0T03_05280 PF01979 Amidohydrolase family F0T03_05285 PF05194 UreE urease accessory protein, C-terminal domain F0T03_05285 PF02814 UreE urease accessory protein, N-terminal domain F0T03_05290 PF01730 UreF F0T03_05295 PF02492 CobW/HypB/UreG, nucleotide-binding domain F0T03_05300 PF01774 UreD urease accessory protein F0T03_05305 PF03253 Urea transporter F0T03_05315 PF05598 Transposase domain (DUF772) F0T03_05315 PF01609 Transposase DDE domain F0T03_05325 PF06411 HdeA/HdeB family F0T03_05330 PF02254 TrkA-N domain F0T03_05330 PF07885 Ion channel F0T03_05335 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F0T03_05340 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F0T03_05345 PF00248 Aldo/keto reductase family F0T03_05350 PF07995 Glucose / Sorbosone dehydrogenase F0T03_05355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F0T03_05360 PF02378 Phosphotransferase system, EIIC F0T03_05365 PF00232 Glycosyl hydrolase family 1 F0T03_05370 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F0T03_05375 PF07883 Cupin domain F0T03_05375 PF12833 Helix-turn-helix domain F0T03_05380 PF04794 YdjC-like protein F0T03_05395 PF17345 Family of unknown function (DUF5375) F0T03_05430 PF04606 Ogr/Delta-like zinc finger F0T03_05440 PF00589 Phage integrase family F0T03_05440 PF13356 Arm DNA-binding domain F0T03_05450 PF01668 SmpB protein F0T03_05455 PF03364 Polyketide cyclase / dehydrase and lipid transport F0T03_05460 PF03658 RnfH family Ubiquitin F0T03_05465 PF04355 SmpA / OmlA family F0T03_05470 PF02463 RecF/RecN/SMC N terminal domain F0T03_05475 PF01513 ATP-NAD kinase F0T03_05480 PF01025 GrpE F0T03_05485 PF03167 Uracil DNA glycosylase superfamily F0T03_05490 PF01228 Glycine radical F0T03_05500 PF12796 Ankyrin repeats (3 copies) F0T03_05505 PF00270 DEAD/DEAH box helicase F0T03_05505 PF00271 Helicase conserved C-terminal domain F0T03_05510 PF05175 Methyltransferase small domain F0T03_05515 PF02910 Fumarate reductase flavoprotein C-term F0T03_05515 PF00890 FAD binding domain F0T03_05520 PF08281 Sigma-70, region 4 F0T03_05520 PF04542 Sigma-70 region 2 F0T03_05525 PF03873 Anti sigma-E protein RseA, C-terminal domain F0T03_05525 PF03872 Anti sigma-E protein RseA, N-terminal domain F0T03_05530 PF03888 MucB/RseB N-terminal domain F0T03_05530 PF17188 MucB/RseB C-terminal domain F0T03_05545 PF05598 Transposase domain (DUF772) F0T03_05545 PF01609 Transposase DDE domain F0T03_05550 PF00679 Elongation factor G C-terminus F0T03_05550 PF00009 Elongation factor Tu GTP binding domain F0T03_05550 PF03144 Elongation factor Tu domain 2 F0T03_05550 PF06421 GTP-binding protein LepA C-terminus F0T03_05555 PF10502 Signal peptidase, peptidase S26 F0T03_05560 PF14622 Ribonuclease-III-like F0T03_05560 PF00035 Double-stranded RNA binding motif F0T03_05565 PF01926 50S ribosome-binding GTPase F0T03_05565 PF07650 KH domain F0T03_05570 PF11967 Recombination protein O N terminal F0T03_05570 PF02565 Recombination protein O C terminal F0T03_05575 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ F0T03_05580 PF01648 4'-phosphopantetheinyl transferase superfamily F0T03_05585 PF02447 GntP family permease F0T03_05590 PF12838 4Fe-4S dicluster domain F0T03_05595 PF01418 Helix-turn-helix domain, rpiR family F0T03_05595 PF01380 SIS domain F0T03_05600 PF01380 SIS domain F0T03_05615 PF14437 MafB19-like deaminase F0T03_05620 PF01464 Transglycosylase SLT domain F0T03_05620 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_05625 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal F0T03_05625 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F0T03_05625 PF02769 AIR synthase related protein, C-terminal domain F0T03_05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_05635 PF00512 His Kinase A (phospho-acceptor) domain F0T03_05640 PF13942 YfhG lipoprotein F0T03_05645 PF00072 Response regulator receiver domain F0T03_05645 PF00158 Sigma-54 interaction domain F0T03_05650 PF00795 Carbon-nitrogen hydrolase F0T03_05650 PF02540 NAD synthase F0T03_05655 PF00543 Nitrogen regulatory protein P-II F0T03_05660 PF10797 Protein of unknown function F0T03_05665 PF10941 Protein of unknown function DUF2620 F0T03_05670 PF02126 Phosphotriesterase family F0T03_05675 PF01168 Alanine racemase, N-terminal domain F0T03_05690 PF01609 Transposase DDE domain F0T03_05690 PF05598 Transposase domain (DUF772) F0T03_05700 PF00970 Oxidoreductase FAD-binding domain F0T03_05700 PF00175 Oxidoreductase NAD-binding domain F0T03_05700 PF00042 Globin F0T03_05705 PF00464 Serine hydroxymethyltransferase F0T03_05710 PF12832 MFS_1 like family F0T03_05715 PF00874 PRD domain F0T03_05720 PF06226 Protein of unknown function (DUF1007) F0T03_05725 PF03824 High-affinity nickel-transport protein F0T03_05730 PF00459 Inositol monophosphatase family F0T03_05735 PF00588 SpoU rRNA Methylase family F0T03_05740 PF02082 Transcriptional regulator F0T03_05745 PF00266 Aminotransferase class-V F0T03_05750 PF01592 NifU-like N terminal domain F0T03_05755 PF01521 Iron-sulphur cluster biosynthesis F0T03_05760 PF07743 HSCB C-terminal oligomerisation domain F0T03_05760 PF00226 DnaJ domain F0T03_05765 PF00012 Hsp70 protein F0T03_05770 PF00111 2Fe-2S iron-sulfur cluster binding domain F0T03_05775 PF04384 Iron-sulphur cluster assembly F0T03_05780 PF00883 Cytosol aminopeptidase family, catalytic domain F0T03_05780 PF12404 Peptidase F0T03_05785 PF14581 SseB protein C-terminal domain F0T03_05785 PF07179 SseB protein N-terminal domain F0T03_05790 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain F0T03_05790 PF17962 Bacterial macroglobulin domain 6 F0T03_05790 PF01835 MG2 domain F0T03_05790 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain F0T03_05790 PF11974 Bacterial alpha-2-macroglobulin MG3 domain F0T03_05790 PF00207 Alpha-2-macroglobulin family F0T03_05790 PF07703 Alpha-2-macroglobulin bait region domain F0T03_05790 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain F0T03_05790 PF07678 A-macroglobulin TED domain F0T03_05795 PF00912 Transglycosylase F0T03_05795 PF06832 Penicillin-Binding Protein C-terminus Family F0T03_05795 PF00905 Penicillin binding protein transpeptidase domain F0T03_05805 PF00334 Nucleoside diphosphate kinase F0T03_05810 PF04055 Radical SAM superfamily F0T03_05820 PF13464 Domain of unknown function (DUF4115) F0T03_05825 PF04551 GcpE protein F0T03_05830 PF13393 Histidyl-tRNA synthetase F0T03_05830 PF03129 Anticodon binding domain F0T03_05835 PF09976 Tetratricopeptide repeat-like domain F0T03_05840 PF13360 PQQ-like domain F0T03_05845 PF01926 50S ribosome-binding GTPase F0T03_05845 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F0T03_05855 PF07191 zinc-ribbons F0T03_05860 PF13742 OB-fold nucleic acid binding domain F0T03_05860 PF02601 Exonuclease VII, large subunit F0T03_05870 PF00571 CBS domain F0T03_05870 PF00478 IMP dehydrogenase / GMP reductase domain F0T03_05875 PF00117 Glutamine amidotransferase class-I F0T03_05875 PF00958 GMP synthase C terminal domain F0T03_05875 PF02540 NAD synthase F0T03_05890 PF00732 GMC oxidoreductase F0T03_05890 PF05199 GMC oxidoreductase F0T03_05895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F0T03_05895 PF00034 Cytochrome c F0T03_05905 PF08543 Phosphomethylpyrimidine kinase F0T03_05920 PF00571 CBS domain F0T03_05920 PF01380 SIS domain F0T03_05925 PF08220 DeoR-like helix-turn-helix domain F0T03_05925 PF00455 DeoR C terminal sensor domain F0T03_05930 PF06923 Glucitol operon activator protein (GutM) F0T03_05935 PF00106 short chain dehydrogenase F0T03_05940 PF03829 PTS system glucitol/sorbitol-specific IIA component F0T03_05945 PF07663 Sorbitol phosphotransferase enzyme II C-terminus F0T03_05945 PF03612 Sorbitol phosphotransferase enzyme II N-terminus F0T03_05950 PF03608 PTS system enzyme II sorbitol-specific factor F0T03_05955 PF00781 Diacylglycerol kinase catalytic domain F0T03_05965 PF07411 Domain of unknown function (DUF1508) F0T03_05970 PF00072 Response regulator receiver domain F0T03_05970 PF00486 Transcriptional regulatory protein, C terminal F0T03_05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_05975 PF00672 HAMP domain F0T03_05975 PF00512 His Kinase A (phospho-acceptor) domain F0T03_05980 PF07690 Major Facilitator Superfamily F0T03_05990 PF00873 AcrB/AcrD/AcrF family F0T03_05995 PF00873 AcrB/AcrD/AcrF family F0T03_06000 PF13533 Biotin-lipoyl like F0T03_06005 PF00419 Fimbrial protein F0T03_06010 PF00577 Outer membrane usher protein F0T03_06010 PF13954 PapC N-terminal domain F0T03_06010 PF13953 PapC C-terminal domain F0T03_06015 PF02753 Pili assembly chaperone PapD, C-terminal domain F0T03_06015 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F0T03_06025 PF00012 Hsp70 protein F0T03_06030 PF08448 PAS fold F0T03_06030 PF13426 PAS domain F0T03_06030 PF00990 Diguanylate cyclase, GGDEF domain F0T03_06030 PF00563 EAL domain F0T03_06030 PF05231 MASE1 F0T03_06030 PF08447 PAS fold F0T03_06035 PF00571 CBS domain F0T03_06035 PF01769 Divalent cation transporter F0T03_06035 PF03448 MgtE intracellular N domain F0T03_06045 PF02541 Ppx/GppA phosphatase family F0T03_06050 PF13089 Polyphosphate kinase N-terminal domain F0T03_06050 PF02503 Polyphosphate kinase middle domain F0T03_06050 PF13090 Polyphosphate kinase C-terminal domain 2 F0T03_06050 PF17941 Polyphosphate kinase C-terminal domain 1 F0T03_06055 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_06060 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_06065 PF00005 ABC transporter F0T03_06070 PF13302 Acetyltransferase (GNAT) domain F0T03_06075 PF00551 Formyl transferase F0T03_06080 PF00586 AIR synthase related protein, N-terminal domain F0T03_06080 PF02769 AIR synthase related protein, C-terminal domain F0T03_06090 PF00860 Permease family F0T03_06095 PF00308 Bacterial dnaA protein F0T03_06100 PF03960 ArsC family F0T03_06105 PF01435 Peptidase family M48 F0T03_06105 PF07720 Tetratricopeptide repeat F0T03_06110 PF01594 AI-2E family transporter F0T03_06115 PF00578 AhpC/TSA family F0T03_06120 PF01842 ACT domain F0T03_06125 PF00701 Dihydrodipicolinate synthetase family F0T03_06130 PF06804 NlpB/DapX lipoprotein F0T03_06135 PF01259 SAICAR synthetase F0T03_06140 PF04228 Putative neutral zinc metallopeptidase F0T03_06145 PF04284 Protein of unknown function (DUF441) F0T03_06150 PF13718 GNAT acetyltransferase 2 F0T03_06150 PF17176 tRNA-binding domain F0T03_06150 PF05127 Helicase F0T03_06155 PF02230 Phospholipase/Carboxylesterase F0T03_06160 PF13980 Uncharacterised protein family (UPF0370) F0T03_06165 PF02557 D-alanyl-D-alanine carboxypeptidase F0T03_06170 PF01546 Peptidase family M20/M25/M40 F0T03_06170 PF07687 Peptidase dimerisation domain F0T03_06175 PF03960 ArsC family F0T03_06185 PF00873 AcrB/AcrD/AcrF family F0T03_06195 PF00196 Bacterial regulatory proteins, luxR family F0T03_06195 PF00072 Response regulator receiver domain F0T03_06205 PF03927 NapD protein F0T03_06210 PF00384 Molybdopterin oxidoreductase F0T03_06210 PF01568 Molydopterin dinucleotide binding domain F0T03_06210 PF10518 TAT (twin-arginine translocation) pathway signal sequence F0T03_06210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F0T03_06215 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) F0T03_06220 PF03264 NapC/NirT cytochrome c family, N-terminal region F0T03_06225 PF00293 NUDIX domain F0T03_06230 PF00390 Malic enzyme, N-terminal domain F0T03_06230 PF03949 Malic enzyme, NAD binding domain F0T03_06230 PF01515 Phosphate acetyl/butaryl transferase F0T03_06235 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F0T03_06240 PF01218 Coproporphyrinogen III oxidase F0T03_06245 PF00583 Acetyltransferase (GNAT) family F0T03_06250 PF00589 Phage integrase family F0T03_06335 PF04076 Bacterial OB fold (BOF) protein F0T03_06340 PF06572 Protein of unknown function (DUF1131) F0T03_06345 PF04261 Dyp-type peroxidase family F0T03_06350 PF00701 Dihydrodipicolinate synthetase family F0T03_06355 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase F0T03_06360 PF00480 ROK family F0T03_06365 PF04074 YhcH/YjgK/YiaL F0T03_06370 PF01418 Helix-turn-helix domain, rpiR family F0T03_06370 PF01380 SIS domain F0T03_06380 PF07690 Major Facilitator Superfamily F0T03_06390 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_06395 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_06400 PF00005 ABC transporter F0T03_06405 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_06410 PF12704 MacB-like periplasmic core domain F0T03_06410 PF02687 FtsX-like permease family F0T03_06410 PF00005 ABC transporter F0T03_06415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_06420 PF00486 Transcriptional regulatory protein, C terminal F0T03_06420 PF00072 Response regulator receiver domain F0T03_06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_06425 PF00512 His Kinase A (phospho-acceptor) domain F0T03_06425 PF00672 HAMP domain F0T03_06425 PF16527 Two-component sensor protein CpxA, periplasmic domain F0T03_06430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F0T03_06435 PF02896 PEP-utilising enzyme, TIM barrel domain F0T03_06435 PF00391 PEP-utilising enzyme, mobile domain F0T03_06435 PF05524 PEP-utilising enzyme, N-terminal F0T03_06440 PF00381 PTS HPr component phosphorylation site F0T03_06445 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_06450 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain F0T03_06450 PF00589 Phage integrase family F0T03_06500 PF10065 Uncharacterized conserved protein (DUF2303) F0T03_06565 PF09669 Phage regulatory protein Rha (Phage_pRha) F0T03_06565 PF03374 Phage antirepressor protein KilAC domain F0T03_06570 PF06147 Protein of unknown function (DUF968) F0T03_06580 PF07927 HicA toxin of bacterial toxin-antitoxin, F0T03_06585 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system F0T03_06600 PF00182 Chitinase class I F0T03_06680 PF04984 Phage tail sheath protein subtilisin-like domain F0T03_06680 PF17482 Phage tail sheath C-terminal domain F0T03_06720 PF07409 Phage protein GP46 F0T03_06725 PF04865 Baseplate J-like protein F0T03_06740 PF02413 Caudovirales tail fibre assembly protein, lambda gpK F0T03_06745 PF06183 DinI-like family F0T03_06760 PF04354 ZipA, C-terminal FtsZ-binding domain F0T03_06765 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F0T03_06765 PF00533 BRCA1 C Terminus (BRCT) domain F0T03_06765 PF03120 NAD-dependent DNA ligase OB-fold domain F0T03_06765 PF12826 Helix-hairpin-helix motif F0T03_06765 PF01653 NAD-dependent DNA ligase adenylation domain F0T03_06770 PF12843 Putative quorum-sensing-regulated virulence factor F0T03_06800 PF00749 tRNA synthetases class I (E and Q), catalytic domain F0T03_06830 PF07670 Nucleoside recognition F0T03_06830 PF07662 Na+ dependent nucleoside transporter C-terminus F0T03_06830 PF01773 Na+ dependent nucleoside transporter N-terminus F0T03_06835 PF01566 Natural resistance-associated macrophage protein F0T03_06845 PF00248 Aldo/keto reductase family F0T03_06850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0T03_06850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0T03_06850 PF00205 Thiamine pyrophosphate enzyme, central domain F0T03_06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_06855 PF03466 LysR substrate binding domain F0T03_06865 PF02685 Glucokinase F0T03_06870 PF07690 Major Facilitator Superfamily F0T03_06875 PF00072 Response regulator receiver domain F0T03_06875 PF04397 LytTr DNA-binding domain F0T03_06880 PF07694 5TMR of 5TMR-LYT F0T03_06880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_06880 PF06580 Histidine kinase F0T03_06885 PF07350 Protein of unknown function (DUF1479) F0T03_06895 PF00155 Aminotransferase class I and II F0T03_06900 PF01292 Prokaryotic cytochrome b561 F0T03_06915 PF03783 Curli production assembly/transport component CsgG F0T03_06925 PF05643 Putative bacterial lipoprotein (DUF799) F0T03_06935 PF02613 Nitrate reductase delta subunit F0T03_06945 PF13247 4Fe-4S dicluster domain F0T03_06945 PF12800 4Fe-4S binding domain F0T03_06950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F0T03_06950 PF01568 Molydopterin dinucleotide binding domain F0T03_06950 PF00384 Molybdopterin oxidoreductase F0T03_06955 PF00874 PRD domain F0T03_06955 PF03123 CAT RNA binding domain F0T03_06960 PF02378 Phosphotransferase system, EIIC F0T03_06960 PF00367 phosphotransferase system, EIIB F0T03_06960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F0T03_06965 PF00232 Glycosyl hydrolase family 1 F0T03_06970 PF04966 Carbohydrate-selective porin, OprB family F0T03_06980 PF01810 LysE type translocator F0T03_06985 PF00005 ABC transporter F0T03_06990 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_07000 PF13406 Transglycosylase SLT domain F0T03_07005 PF00324 Amino acid permease F0T03_07010 PF07969 Amidohydrolase family F0T03_07020 PF07690 Major Facilitator Superfamily F0T03_07025 PF02405 Permease MlaE F0T03_07030 PF00005 ABC transporter F0T03_07045 PF01292 Prokaryotic cytochrome b561 F0T03_07050 PF04264 YceI-like domain F0T03_07055 PF00356 Bacterial regulatory proteins, lacI family F0T03_07060 PF00367 phosphotransferase system, EIIB F0T03_07060 PF02378 Phosphotransferase system, EIIC F0T03_07065 PF00232 Glycosyl hydrolase family 1 F0T03_07075 PF03551 Transcriptional regulator PadR-like family F0T03_07080 PF03831 PhnA domain F0T03_07080 PF08274 PhnA Zinc-Ribbon F0T03_07085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_07085 PF03466 LysR substrate binding domain F0T03_07110 PF01580 FtsK/SpoIIIE family F0T03_07110 PF09397 Ftsk gamma domain F0T03_07110 PF17854 FtsK alpha domain F0T03_07125 PF13693 Winged helix-turn-helix DNA-binding F0T03_07150 PF04002 RadC-like JAB domain F0T03_07155 PF02899 Phage integrase, N-terminal SAM-like domain F0T03_07155 PF00589 Phage integrase family F0T03_07205 PF00665 Integrase core domain F0T03_07205 PF13936 Helix-turn-helix domain F0T03_07215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F0T03_07220 PF12146 Serine aminopeptidase, S33 F0T03_07225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_07225 PF03466 LysR substrate binding domain F0T03_07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_07240 PF03466 LysR substrate binding domain F0T03_07245 PF13472 GDSL-like Lipase/Acylhydrolase family F0T03_07260 PF13356 Arm DNA-binding domain F0T03_07260 PF00589 Phage integrase family F0T03_07270 PF01226 Formate/nitrite transporter F0T03_07275 PF00005 ABC transporter F0T03_07280 PF03379 CcmB protein F0T03_07285 PF01578 Cytochrome C assembly protein F0T03_07290 PF04995 Heme exporter protein D (CcmD) F0T03_07295 PF03100 CcmE F0T03_07300 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F0T03_07300 PF01578 Cytochrome C assembly protein F0T03_07305 PF08534 Redoxin F0T03_07310 PF03918 Cytochrome C biogenesis protein F0T03_07315 PF03918 Cytochrome C biogenesis protein F0T03_07320 PF04333 MlaA lipoprotein F0T03_07325 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F0T03_07330 PF04175 Protein of unknown function (DUF406) F0T03_07335 PF02803 Thiolase, C-terminal domain F0T03_07335 PF00108 Thiolase, N-terminal domain F0T03_07340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F0T03_07340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F0T03_07340 PF00378 Enoyl-CoA hydratase/isomerase F0T03_07345 PF00300 Histidine phosphatase superfamily (branch 1) F0T03_07350 PF01713 Smr domain F0T03_07355 PF05175 Methyltransferase small domain F0T03_07360 PF01264 Chorismate synthase F0T03_07365 PF03411 Penicillin-insensitive murein endopeptidase F0T03_07370 PF01925 Sulfite exporter TauE/SafE F0T03_07375 PF04315 Elongation factor P hydroxylase F0T03_07380 PF08891 YfcL protein F0T03_07385 PF05430 S-adenosyl-L-methionine-dependent methyltransferase F0T03_07385 PF01266 FAD dependent oxidoreductase F0T03_07390 PF00109 Beta-ketoacyl synthase, N-terminal domain F0T03_07390 PF02801 Beta-ketoacyl synthase, C-terminal domain F0T03_07395 PF00072 Response regulator receiver domain F0T03_07395 PF00990 Diguanylate cyclase, GGDEF domain F0T03_07400 PF01177 Asp/Glu/Hydantoin racemase F0T03_07410 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F0T03_07415 PF00232 Glycosyl hydrolase family 1 F0T03_07420 PF02378 Phosphotransferase system, EIIC F0T03_07425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F0T03_07430 PF00356 Bacterial regulatory proteins, lacI family F0T03_07435 PF00328 Histidine phosphatase superfamily (branch 2) F0T03_07440 PF03600 Citrate transporter F0T03_07455 PF02683 Cytochrome C biogenesis protein transmembrane region F0T03_07455 PF11412 Disulphide bond corrector protein DsbC F0T03_07465 PF00578 AhpC/TSA family F0T03_07470 PF00155 Aminotransferase class I and II F0T03_07480 PF00892 EamA-like transporter family F0T03_07490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F0T03_07490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0T03_07490 PF11890 Domain of unknown function (DUF3410) F0T03_07495 PF02774 Semialdehyde dehydrogenase, dimerisation domain F0T03_07495 PF01118 Semialdehyde dehydrogenase, NAD binding domain F0T03_07500 PF01416 tRNA pseudouridine synthase F0T03_07505 PF09335 SNARE associated Golgi protein F0T03_07510 PF17848 Acetyl-coA carboxylase zinc finger domain F0T03_07510 PF01039 Carboxyl transferase domain F0T03_07515 PF02875 Mur ligase family, glutamate ligase domain F0T03_07515 PF08245 Mur ligase middle domain F0T03_07520 PF05036 Sporulation related domain F0T03_07525 PF02674 Colicin V production protein F0T03_07530 PF00156 Phosphoribosyl transferase domain F0T03_07535 PF02441 Flavoprotein F0T03_07540 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_07545 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_07550 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_07555 PF00005 ABC transporter F0T03_07560 PF01370 NAD dependent epimerase/dehydratase family F0T03_07560 PF08338 Domain of unknown function (DUF1731) F0T03_07570 PF12850 Calcineurin-like phosphoesterase superfamily domain F0T03_07575 PF00293 NUDIX domain F0T03_07580 PF03611 PTS system sugar-specific permease component F0T03_07590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F0T03_07595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F0T03_07595 PF00356 Bacterial regulatory proteins, lacI family F0T03_07600 PF07085 DRTGG domain F0T03_07600 PF01515 Phosphate acetyl/butaryl transferase F0T03_07605 PF00871 Acetokinase family F0T03_07610 PF04217 Protein of unknown function, DUF412 F0T03_07615 PF03887 YfbU domain F0T03_07620 PF13419 Haloacid dehalogenase-like hydrolase F0T03_07630 PF02080 TrkA-C domain F0T03_07630 PF03600 Citrate transporter F0T03_07640 PF00155 Aminotransferase class I and II F0T03_07645 PF03466 LysR substrate binding domain F0T03_07645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_07650 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 F0T03_07655 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F0T03_07660 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F0T03_07660 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F0T03_07670 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region F0T03_07670 PF10531 SLBB domain F0T03_07670 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F0T03_07675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F0T03_07675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F0T03_07675 PF01568 Molydopterin dinucleotide binding domain F0T03_07675 PF00384 Molybdopterin oxidoreductase F0T03_07680 PF00146 NADH dehydrogenase F0T03_07685 PF12838 4Fe-4S dicluster domain F0T03_07690 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 F0T03_07695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F0T03_07700 PF00361 Proton-conducting membrane transporter F0T03_07700 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F0T03_07705 PF00361 Proton-conducting membrane transporter F0T03_07710 PF00361 Proton-conducting membrane transporter F0T03_07715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_07715 PF03466 LysR substrate binding domain F0T03_07725 PF06496 Protein of unknown function (DUF1097) F0T03_07740 PF01202 Shikimate kinase F0T03_07745 PF00106 short chain dehydrogenase F0T03_07750 PF00356 Bacterial regulatory proteins, lacI family F0T03_07755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0T03_07755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F0T03_07760 PF07690 Major Facilitator Superfamily F0T03_07765 PF03928 Haem-degrading F0T03_07770 PF00920 Dehydratase family F0T03_07775 PF05957 Bacterial protein of unknown function (DUF883) F0T03_07780 PF00425 chorismate binding enzyme F0T03_07785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0T03_07785 PF16582 Middle domain of thiamine pyrophosphate F0T03_07785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0T03_07790 PF12697 Alpha/beta hydrolase family F0T03_07795 PF00378 Enoyl-CoA hydratase/isomerase F0T03_07800 PF13378 Enolase C-terminal domain-like F0T03_07805 PF13193 AMP-binding enzyme C-terminal domain F0T03_07805 PF00501 AMP-binding enzyme F0T03_07810 PF00199 Catalase F0T03_07810 PF06628 Catalase-related immune-responsive F0T03_07815 PF07437 YfaZ precursor F0T03_07820 PF03222 Tryptophan/tyrosine permease family F0T03_07825 PF00994 Probable molybdopterin binding domain F0T03_07830 PF03974 Ecotin F0T03_07835 PF00111 2Fe-2S iron-sulfur cluster binding domain F0T03_07840 PF00268 Ribonucleotide reductase, small chain F0T03_07845 PF03477 ATP cone domain F0T03_07845 PF00317 Ribonucleotide reductase, all-alpha domain F0T03_07845 PF02867 Ribonucleotide reductase, barrel domain F0T03_07855 PF00521 DNA gyrase/topoisomerase IV, subunit A F0T03_07855 PF03989 DNA gyrase C-terminal domain, beta-propeller F0T03_07860 PF00072 Response regulator receiver domain F0T03_07860 PF09456 RcsC Alpha-Beta-Loop (ABL) F0T03_07860 PF00512 His Kinase A (phospho-acceptor) domain F0T03_07860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_07865 PF00196 Bacterial regulatory proteins, luxR family F0T03_07865 PF00072 Response regulator receiver domain F0T03_07870 PF16359 RcsD-ABL domain F0T03_07870 PF01627 Hpt domain F0T03_07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_07875 PF07690 Major Facilitator Superfamily F0T03_07880 PF00267 Gram-negative porin F0T03_07895 PF00144 Beta-lactamase F0T03_07905 PF12706 Beta-lactamase superfamily domain F0T03_07910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_07910 PF02743 Cache domain F0T03_07910 PF00672 HAMP domain F0T03_07915 PF06183 DinI-like family F0T03_07920 PF01381 Helix-turn-helix F0T03_07920 PF00717 Peptidase S24-like F0T03_07925 PF06530 Phage antitermination protein Q F0T03_07935 PF01418 Helix-turn-helix domain, rpiR family F0T03_07935 PF01380 SIS domain F0T03_07940 PF02378 Phosphotransferase system, EIIC F0T03_07940 PF00367 phosphotransferase system, EIIB F0T03_07940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F0T03_07945 PF00232 Glycosyl hydrolase family 1 F0T03_07950 PF00194 Eukaryotic-type carbonic anhydrase F0T03_07990 PF11893 Domain of unknown function (DUF3413) F0T03_07990 PF00884 Sulfatase F0T03_07995 PF07208 Protein of unknown function (DUF1414) F0T03_08000 PF04245 37-kD nucleoid-associated bacterial protein F0T03_08005 PF01386 Ribosomal L25p family F0T03_08010 PF04851 Type III restriction enzyme, res subunit F0T03_08010 PF00271 Helicase conserved C-terminal domain F0T03_08015 PF00849 RNA pseudouridylate synthase F0T03_08015 PF01479 S4 domain F0T03_08020 PF07690 Major Facilitator Superfamily F0T03_08025 PF13989 YejG-like protein F0T03_08030 PF00005 ABC transporter F0T03_08030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0T03_08035 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_08035 PF12911 N-terminal TM domain of oligopeptide transport permease C F0T03_08040 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_08045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_08050 PF12792 CSS motif domain associated with EAL F0T03_08050 PF00563 EAL domain F0T03_08060 PF00877 NlpC/P60 family F0T03_08065 PF01569 PAP2 superfamily F0T03_08070 PF07683 Cobalamin synthesis protein cobW C-terminal domain F0T03_08070 PF02492 CobW/HypB/UreG, nucleotide-binding domain F0T03_08080 PF07729 FCD domain F0T03_08080 PF00392 Bacterial regulatory proteins, gntR family F0T03_08085 PF08125 Mannitol dehydrogenase C-terminal domain F0T03_08085 PF01232 Mannitol dehydrogenase Rossmann domain F0T03_08090 PF03786 D-mannonate dehydratase (UxuA) F0T03_08095 PF08207 Elongation factor P (EF-P) KOW-like domain F0T03_08095 PF09285 Elongation factor P, C-terminal F0T03_08095 PF01132 Elongation factor P (EF-P) OB domain F0T03_08100 PF03222 Tryptophan/tyrosine permease family F0T03_08105 PF03692 Putative zinc- or iron-chelating domain F0T03_08110 PF18364 Molybdopterin oxidoreductase N-terminal domain F0T03_08110 PF01568 Molydopterin dinucleotide binding domain F0T03_08110 PF00384 Molybdopterin oxidoreductase F0T03_08115 PF03264 NapC/NirT cytochrome c family, N-terminal region F0T03_08120 PF00293 NUDIX domain F0T03_08120 PF13344 Haloacid dehalogenase-like hydrolase F0T03_08125 PF00381 PTS HPr component phosphorylation site F0T03_08125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F0T03_08130 PF00294 pfkB family carbohydrate kinase F0T03_08135 PF02378 Phosphotransferase system, EIIC F0T03_08135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F0T03_08140 PF01261 Xylose isomerase-like TIM barrel F0T03_08145 PF03601 Conserved hypothetical protein 698 F0T03_08160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_08160 PF03466 LysR substrate binding domain F0T03_08165 PF00324 Amino acid permease F0T03_08170 PF01032 FecCD transport family F0T03_08175 PF00005 ABC transporter F0T03_08180 PF07715 TonB-dependent Receptor Plug Domain F0T03_08180 PF00593 TonB dependent receptor F0T03_08185 PF13417 Glutathione S-transferase, N-terminal domain F0T03_08185 PF00043 Glutathione S-transferase, C-terminal domain F0T03_08200 PF03180 NLPA lipoprotein F0T03_08205 PF00005 ABC transporter F0T03_08205 PF09383 NIL domain F0T03_08210 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_08215 PF01053 Cys/Met metabolism PLP-dependent enzyme F0T03_08220 PF00571 CBS domain F0T03_08220 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_08225 PF00768 D-alanyl-D-alanine carboxypeptidase F0T03_08225 PF07943 Penicillin-binding protein 5, C-terminal domain F0T03_08230 PF03315 Serine dehydratase beta chain F0T03_08230 PF03313 Serine dehydratase alpha chain F0T03_08240 PF00455 DeoR C terminal sensor domain F0T03_08240 PF08220 DeoR-like helix-turn-helix domain F0T03_08245 PF01791 DeoC/LacD family aldolase F0T03_08250 PF01569 PAP2 superfamily F0T03_08260 PF06826 Predicted Permease Membrane Region F0T03_08260 PF02080 TrkA-C domain F0T03_08265 PF00462 Glutaredoxin F0T03_08270 PF07214 Protein of unknown function (DUF1418) F0T03_08275 PF10722 Putative bacterial sensory transduction regulator F0T03_08280 PF13416 Bacterial extracellular solute-binding protein F0T03_08285 PF08402 TOBE domain F0T03_08285 PF00005 ABC transporter F0T03_08290 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_08295 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_08300 PF10767 Protein of unknown function (DUF2593) F0T03_08305 PF05958 tRNA (Uracil-5-)-methyltransferase F0T03_08310 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_08315 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_08320 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_08325 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_08330 PF00005 ABC transporter F0T03_08335 PF12883 Protein of unknown function (DUF3828) F0T03_08345 PF01370 NAD dependent epimerase/dehydratase family F0T03_08350 PF11066 Protein of unknown function (DUF2867) F0T03_08350 PF13460 NAD(P)H-binding F0T03_08355 PF01212 Beta-eliminating lyase F0T03_08360 PF04072 Leucine carboxyl methyltransferase F0T03_08365 PF00205 Thiamine pyrophosphate enzyme, central domain F0T03_08365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0T03_08365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0T03_08370 PF00111 2Fe-2S iron-sulfur cluster binding domain F0T03_08370 PF00970 Oxidoreductase FAD-binding domain F0T03_08370 PF00175 Oxidoreductase NAD-binding domain F0T03_08375 PF03063 Prismane/CO dehydrogenase family F0T03_08380 PF03956 Lysine exporter LysO F0T03_08385 PF11398 Protein of unknown function (DUF2813) F0T03_08390 PF04393 Protein of unknown function (DUF535) F0T03_08395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_08400 PF00005 ABC transporter F0T03_08400 PF02687 FtsX-like permease family F0T03_08400 PF12704 MacB-like periplasmic core domain F0T03_08405 PF00313 'Cold-shock' DNA-binding domain F0T03_08410 PF02617 ATP-dependent Clp protease adaptor protein ClpS F0T03_08415 PF00004 ATPase family associated with various cellular activities (AAA) F0T03_08415 PF17871 AAA lid domain F0T03_08415 PF07724 AAA domain (Cdc48 subfamily) F0T03_08415 PF10431 C-terminal, D2-small domain, of ClpB protein F0T03_08415 PF02861 Clp amino terminal domain, pathogenicity island component F0T03_08420 PF01176 Translation initiation factor 1A / IF-1 F0T03_08425 PF03588 Leucyl/phenylalanyl-tRNA protein transferase F0T03_08430 PF00005 ABC transporter F0T03_08430 PF00664 ABC transporter transmembrane region F0T03_08435 PF00664 ABC transporter transmembrane region F0T03_08435 PF00005 ABC transporter F0T03_08440 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_08445 PF01037 Lrp/AsnC ligand binding domain F0T03_08450 PF01580 FtsK/SpoIIIE family F0T03_08450 PF09397 Ftsk gamma domain F0T03_08450 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F0T03_08450 PF17854 FtsK alpha domain F0T03_08455 PF03548 Outer membrane lipoprotein carrier protein LolA F0T03_08460 PF12002 MgsA AAA+ ATPase C terminal F0T03_08460 PF16193 AAA C-terminal domain F0T03_08460 PF00004 ATPase family associated with various cellular activities (AAA) F0T03_08470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F0T03_08470 PF02403 Seryl-tRNA synthetase N-terminal domain F0T03_08475 PF07690 Major Facilitator Superfamily F0T03_08480 PF04055 Radical SAM superfamily F0T03_08485 PF01228 Glycine radical F0T03_08485 PF02901 Pyruvate formate lyase-like F0T03_08490 PF01226 Formate/nitrite transporter F0T03_08495 PF18381 YcaO cyclodehydratase C-terminal domain F0T03_08495 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding F0T03_08500 PF17763 Glutaminase/Asparaginase C-terminal domain F0T03_08500 PF00710 Asparaginase, N-terminal F0T03_08510 PF00266 Aminotransferase class-V F0T03_08515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F0T03_08520 PF02224 Cytidylate kinase F0T03_08525 PF00575 S1 RNA binding domain F0T03_08530 PF00216 Bacterial DNA-binding protein F0T03_08535 PF00753 Metallo-beta-lactamase superfamily F0T03_08535 PF03772 Competence protein F0T03_08540 PF00005 ABC transporter F0T03_08540 PF00664 ABC transporter transmembrane region F0T03_08545 PF02606 Tetraacyldisaccharide-1-P 4'-kinase F0T03_08550 PF07063 Domain of unknown function (DUF1338) F0T03_08560 PF00313 'Cold-shock' DNA-binding domain F0T03_08565 PF03966 Trm112p-like protein F0T03_08570 PF02348 Cytidylyltransferase F0T03_08575 PF01636 Phosphotransferase enzyme family F0T03_08580 PF02698 DUF218 domain F0T03_08590 PF17193 MukF C-terminal domain F0T03_08590 PF03882 MukF winged-helix domain F0T03_08590 PF17192 MukF middle domain F0T03_08595 PF04288 MukE-like family F0T03_08600 PF16330 MukB hinge domain F0T03_08600 PF04310 MukB N-terminal F0T03_08605 PF03734 L,D-transpeptidase catalytic domain F0T03_08605 PF01471 Putative peptidoglycan binding domain F0T03_08610 PF05951 Bacterial protein of unknown function (DUF882) F0T03_08615 PF00753 Metallo-beta-lactamase superfamily F0T03_08620 PF12792 CSS motif domain associated with EAL F0T03_08620 PF00563 EAL domain F0T03_08625 PF00155 Aminotransferase class I and II F0T03_08630 PF00267 Gram-negative porin F0T03_08635 PF01336 OB-fold nucleic acid binding domain F0T03_08635 PF00152 tRNA synthetases class II (D, K and N) F0T03_08640 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain F0T03_08640 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family F0T03_08645 PF01433 Peptidase family M1 domain F0T03_08645 PF11940 Domain of unknown function (DUF3458) Ig-like fold F0T03_08645 PF17432 Domain of unknown function (DUF3458_C) ARM repeats F0T03_08650 PF01180 Dihydroorotate dehydrogenase F0T03_08655 PF07126 Cell-division protein ZapC F0T03_08660 PF03473 MOSC domain F0T03_08660 PF03476 MOSC N-terminal beta barrel domain F0T03_08660 PF00111 2Fe-2S iron-sulfur cluster binding domain F0T03_08665 PF02926 THUMP domain F0T03_08665 PF10672 S-adenosylmethionine-dependent methyltransferase F0T03_08665 PF01170 Putative RNA methylase family UPF0020 F0T03_08670 PF00005 ABC transporter F0T03_08670 PF16326 ABC transporter C-terminal domain F0T03_08670 PF12848 ABC transporter F0T03_08675 PF04403 Paraquat-inducible protein A F0T03_08680 PF02470 MlaD protein F0T03_08685 PF03886 ABC-type transport auxiliary lipoprotein component F0T03_08690 PF04957 Ribosome modulation factor F0T03_08695 PF02801 Beta-ketoacyl synthase, C-terminal domain F0T03_08695 PF00109 Beta-ketoacyl synthase, N-terminal domain F0T03_08705 PF07977 FabA-like domain F0T03_08710 PF05362 Lon protease (S16) C-terminal proteolytic domain F0T03_08710 PF13654 AAA domain F0T03_08715 PF06303 MatP N-terminal domain F0T03_08715 PF17414 MatP C-terminal ribbon-helix-helix domain F0T03_08720 PF00691 OmpA family F0T03_08720 PF01389 OmpA-like transmembrane domain F0T03_08725 PF03846 Cell division inhibitor SulA F0T03_08730 PF04994 TfoX C-terminal domain F0T03_08730 PF04993 TfoX N-terminal domain F0T03_08735 PF12805 FUSC-like inner membrane protein yccS F0T03_08740 PF03733 Inner membrane component domain F0T03_08745 PF13361 UvrD-like helicase C-terminal domain F0T03_08745 PF00580 UvrD/REP helicase N-terminal domain F0T03_08745 PF12462 DNA helicase IV / RNA helicase N terminal F0T03_08750 PF02142 MGS-like domain F0T03_08755 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) F0T03_08760 PF13380 CoA binding domain F0T03_08765 PF08755 Hemimethylated DNA-binding protein YccV like F0T03_08770 PF10672 S-adenosylmethionine-dependent methyltransferase F0T03_08770 PF17785 PUA-like domain F0T03_08785 PF00708 Acylphosphatase F0T03_08790 PF04358 DsrC like protein F0T03_08800 PF02335 Cytochrome c552 F0T03_08805 PF13435 Cytochrome c554 and c-prime F0T03_08805 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) F0T03_08810 PF13247 4Fe-4S dicluster domain F0T03_08810 PF00037 4Fe-4S binding domain F0T03_08815 PF03916 Polysulphide reductase, NrfD F0T03_08820 PF01578 Cytochrome C assembly protein F0T03_08820 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F0T03_08825 PF08534 Redoxin F0T03_08830 PF03918 Cytochrome C biogenesis protein F0T03_08840 PF03472 Autoinducer binding domain F0T03_08840 PF00196 Bacterial regulatory proteins, luxR family F0T03_08845 PF00765 Autoinducer synthase F0T03_08855 PF02080 TrkA-C domain F0T03_08855 PF00999 Sodium/hydrogen exchanger family F0T03_08855 PF03471 Transporter associated domain F0T03_08865 PF01757 Acyltransferase family F0T03_08870 PF04349 Periplasmic glucan biosynthesis protein, MdoG F0T03_08875 PF00535 Glycosyl transferase family 2 F0T03_08880 PF07119 Protein of unknown function (DUF1375) F0T03_08895 PF00854 POT family F0T03_08900 PF07690 Major Facilitator Superfamily F0T03_08905 PF07681 DoxX F0T03_08910 PF03279 Bacterial lipid A biosynthesis acyltransferase F0T03_08915 PF00072 Response regulator receiver domain F0T03_08915 PF00196 Bacterial regulatory proteins, luxR family F0T03_08920 PF00512 His Kinase A (phospho-acceptor) domain F0T03_08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_08925 PF13247 4Fe-4S dicluster domain F0T03_08930 PF03916 Polysulphide reductase, NrfD F0T03_08935 PF01568 Molydopterin dinucleotide binding domain F0T03_08935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F0T03_08935 PF00384 Molybdopterin oxidoreductase F0T03_08945 PF01594 AI-2E family transporter F0T03_08950 PF10968 Protein of unknown function (DUF2770) F0T03_08955 PF00196 Bacterial regulatory proteins, luxR family F0T03_08960 PF01266 FAD dependent oxidoreductase F0T03_08965 PF13991 BssS protein family F0T03_08975 PF01979 Amidohydrolase family F0T03_08980 PF03992 Antibiotic biosynthesis monooxygenase F0T03_08985 PF12111 Polyribonucleotide phosphorylase C terminal F0T03_08985 PF10150 Ribonuclease E/G family F0T03_08985 PF00575 S1 RNA binding domain F0T03_08990 PF01479 S4 domain F0T03_08990 PF00849 RNA pseudouridylate synthase F0T03_08995 PF02545 Maf-like protein F0T03_09000 PF02620 Large ribosomal RNA subunit accumulation protein YceD F0T03_09005 PF01783 Ribosomal L32p protein family F0T03_09010 PF02504 Fatty acid synthesis protein F0T03_09015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F0T03_09015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F0T03_09020 PF00698 Acyl transferase domain F0T03_09030 PF00550 Phosphopantetheine attachment site F0T03_09035 PF02801 Beta-ketoacyl synthase, C-terminal domain F0T03_09035 PF00109 Beta-ketoacyl synthase, N-terminal domain F0T03_09040 PF01063 Amino-transferase class IV F0T03_09045 PF02618 YceG-like family F0T03_09050 PF02223 Thymidylate kinase F0T03_09055 PF09115 DNA polymerase III, delta subunit, C terminal F0T03_09060 PF01026 TatD related DNase F0T03_09065 PF00367 phosphotransferase system, EIIB F0T03_09065 PF02378 Phosphotransferase system, EIIC F0T03_09070 PF12793 Sugar transport-related sRNA regulator N-term F0T03_09070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_09075 PF08501 Shikimate dehydrogenase substrate binding domain F0T03_09080 PF01230 HIT domain F0T03_09085 PF07233 Protein of unknown function (DUF1425) F0T03_09090 PF08139 Prokaryotic membrane lipoprotein lipid attachment site F0T03_09090 PF13036 Peptidoglycan-synthase activator LpoB F0T03_09095 PF01636 Phosphotransferase enzyme family F0T03_09100 PF00933 Glycosyl hydrolase family 3 N terminal domain F0T03_09105 PF05728 Uncharacterised protein family (UPF0227) F0T03_09110 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_09115 PF05433 Glycine zipper 2TM domain F0T03_09120 PF00271 Helicase conserved C-terminal domain F0T03_09120 PF00270 DEAD/DEAH box helicase F0T03_09120 PF03461 TRCF domain F0T03_09120 PF17757 UvrB interaction domain F0T03_09120 PF02559 CarD-like/TRCF domain F0T03_09125 PF12704 MacB-like periplasmic core domain F0T03_09125 PF02687 FtsX-like permease family F0T03_09130 PF00005 ABC transporter F0T03_09135 PF02687 FtsX-like permease family F0T03_09135 PF12704 MacB-like periplasmic core domain F0T03_09140 PF00480 ROK family F0T03_09145 PF02146 Sir2 family F0T03_09150 PF07687 Peptidase dimerisation domain F0T03_09150 PF01546 Peptidase family M20/M25/M40 F0T03_09155 PF08007 Cupin superfamily protein F0T03_09160 PF08918 PhoQ Sensor F0T03_09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_09165 PF00072 Response regulator receiver domain F0T03_09165 PF00486 Transcriptional regulatory protein, C terminal F0T03_09175 PF08328 Adenylosuccinate lyase C-terminal F0T03_09175 PF00206 Lyase F0T03_09180 PF04356 Protein of unknown function (DUF489) F0T03_09190 PF00293 NUDIX domain F0T03_09195 PF00849 RNA pseudouridylate synthase F0T03_09200 PF00180 Isocitrate/isopropylmalate dehydrogenase F0T03_09205 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain F0T03_09205 PF00589 Phage integrase family F0T03_09220 PF00132 Bacterial transferase hexapeptide (six repeats) F0T03_09225 PF07690 Major Facilitator Superfamily F0T03_09235 PF00440 Bacterial regulatory proteins, tetR family F0T03_09245 PF13936 Helix-turn-helix domain F0T03_09245 PF00665 Integrase core domain F0T03_09255 PF02413 Caudovirales tail fibre assembly protein, lambda gpK F0T03_09260 PF03797 Autotransporter beta-domain F0T03_09290 PF00180 Isocitrate/isopropylmalate dehydrogenase F0T03_09305 PF01306 LacY proton/sugar symporter F0T03_09310 PF08244 Glycosyl hydrolases family 32 C terminal F0T03_09310 PF00251 Glycosyl hydrolases family 32 N-terminal domain F0T03_09315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F0T03_09315 PF00356 Bacterial regulatory proteins, lacI family F0T03_09325 PF08447 PAS fold F0T03_09325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_09335 PF11799 impB/mucB/samB family C-terminal domain F0T03_09335 PF00817 impB/mucB/samB family F0T03_09335 PF13438 Domain of unknown function (DUF4113) F0T03_09335 PF11798 IMS family HHH motif F0T03_09340 PF00717 Peptidase S24-like F0T03_09345 PF01053 Cys/Met metabolism PLP-dependent enzyme F0T03_09350 PF05368 NmrA-like family F0T03_09355 PF01638 HxlR-like helix-turn-helix F0T03_09365 PF00892 EamA-like transporter family F0T03_09370 PF12833 Helix-turn-helix domain F0T03_09375 PF07007 Lysozyme inhibitor LprI F0T03_09380 PF06411 HdeA/HdeB family F0T03_09390 PF00360 Phytochrome region F0T03_09390 PF00990 Diguanylate cyclase, GGDEF domain F0T03_09390 PF01590 GAF domain F0T03_09390 PF00563 EAL domain F0T03_09400 PF00005 ABC transporter F0T03_09400 PF00664 ABC transporter transmembrane region F0T03_09410 PF13520 Amino acid permease F0T03_09420 PF12833 Helix-turn-helix domain F0T03_09425 PF10964 Protein of unknown function (DUF2766) F0T03_09430 PF13996 YobH-like protein F0T03_09435 PF13998 MgrB protein F0T03_09440 PF13974 YebO-like protein F0T03_09455 PF00324 Amino acid permease F0T03_09460 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP F0T03_09465 PF10736 Protein of unknown function (DUF2627) F0T03_09470 PF00313 'Cold-shock' DNA-binding domain F0T03_09480 PF00905 Penicillin binding protein transpeptidase domain F0T03_09480 PF03717 Penicillin-binding Protein dimerisation domain F0T03_09485 PF13847 Methyltransferase domain F0T03_09495 PF05231 MASE1 F0T03_09495 PF08447 PAS fold F0T03_09495 PF00563 EAL domain F0T03_09495 PF13426 PAS domain F0T03_09495 PF08448 PAS fold F0T03_09495 PF00990 Diguanylate cyclase, GGDEF domain F0T03_09500 PF07715 TonB-dependent Receptor Plug Domain F0T03_09500 PF00593 TonB dependent receptor F0T03_09505 PF02659 Putative manganese efflux pump F0T03_09510 PF06173 Protein of unknown function (DUF986) F0T03_09515 PF03613 PTS system mannose/fructose/sorbose family IID component F0T03_09520 PF03609 PTS system sorbose-specific iic component F0T03_09525 PF03830 PTS system sorbose subfamily IIB component F0T03_09525 PF03610 PTS system fructose IIA component F0T03_09530 PF03471 Transporter associated domain F0T03_09530 PF03741 Integral membrane protein TerC family F0T03_09535 PF02048 Heat-stable enterotoxin ST F0T03_09540 PF03315 Serine dehydratase beta chain F0T03_09540 PF03313 Serine dehydratase alpha chain F0T03_09545 PF00293 NUDIX domain F0T03_09550 PF04715 Anthranilate synthase component I, N terminal region F0T03_09550 PF00425 chorismate binding enzyme F0T03_09555 PF03701 Uncharacterised protein family (UPF0181) F0T03_09560 PF02222 ATP-grasp domain F0T03_09565 PF03880 DbpA RNA binding domain F0T03_09565 PF00270 DEAD/DEAH box helicase F0T03_09565 PF00271 Helicase conserved C-terminal domain F0T03_09570 PF07130 YebG protein F0T03_09580 PF13995 YebF-like protein F0T03_09585 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F0T03_09585 PF00326 Prolyl oligopeptidase family F0T03_09590 PF00929 Exonuclease F0T03_09595 PF00561 alpha/beta hydrolase fold F0T03_09600 PF06440 DNA polymerase III, theta subunit F0T03_09605 PF00210 Ferritin-like domain F0T03_09610 PF04234 CopC domain F0T03_09615 PF05425 Copper resistance protein D F0T03_09620 PF10709 Protein of unknown function (DUF2511) F0T03_09635 PF03797 Autotransporter beta-domain F0T03_09640 PF01278 Omptin family F0T03_09685 PF00924 Mechanosensitive ion channel F0T03_09690 PF00132 Bacterial transferase hexapeptide (six repeats) F0T03_09695 PF00561 alpha/beta hydrolase fold F0T03_09700 PF00582 Universal stress protein family F0T03_09705 PF10753 Toxin GhoT_OrtT F0T03_09710 PF00144 Beta-lactamase F0T03_09715 PF01479 S4 domain F0T03_09715 PF00849 RNA pseudouridylate synthase F0T03_09735 PF02798 Glutathione S-transferase, N-terminal domain F0T03_09735 PF14834 Glutathione S-transferase, C-terminal domain F0T03_09750 PF07351 Protein of unknown function (DUF1480) F0T03_09755 PF01590 GAF domain F0T03_09755 PF00990 Diguanylate cyclase, GGDEF domain F0T03_09755 PF00563 EAL domain F0T03_09755 PF00360 Phytochrome region F0T03_09795 PF03466 LysR substrate binding domain F0T03_09795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_09800 PF02470 MlaD protein F0T03_09805 PF04403 Paraquat-inducible protein A F0T03_09810 PF13185 GAF domain F0T03_09815 PF04352 ProQ/FINO family F0T03_09815 PF17516 ProQ C-terminal domain F0T03_09820 PF00595 PDZ domain F0T03_09820 PF03572 Peptidase family S41 F0T03_09820 PF17804 Tail specific protease N-terminal domain F0T03_09820 PF11818 C-terminal domain of tail specific protease (DUF3340) F0T03_09825 PF01435 Peptidase family M48 F0T03_09830 PF07690 Major Facilitator Superfamily F0T03_09835 PF14583 Oligogalacturonate lyase F0T03_09840 PF09339 IclR helix-turn-helix domain F0T03_09840 PF01614 Bacterial transcriptional regulator F0T03_09845 PF01510 N-acetylmuramoyl-L-alanine amidase F0T03_09855 PF04307 LexA-binding, inner membrane-associated putative hydrolase F0T03_09865 PF06178 Oligogalacturonate-specific porin protein (KdgM) F0T03_09870 PF01547 Bacterial extracellular solute-binding protein F0T03_09875 PF03459 TOBE domain F0T03_09875 PF00005 ABC transporter F0T03_09875 PF17912 MalK OB fold domain F0T03_09880 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_09885 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_09890 PF06917 Periplasmic pectate lyase F0T03_09900 PF04962 KduI/IolB family F0T03_09905 PF07883 Cupin domain F0T03_09910 PF13419 Haloacid dehalogenase-like hydrolase F0T03_09915 PF14002 YniB-like protein F0T03_09920 PF03466 LysR substrate binding domain F0T03_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_09925 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain F0T03_09925 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain F0T03_09930 PF00378 Enoyl-CoA hydratase/isomerase F0T03_09940 PF02310 B12 binding domain F0T03_09940 PF01642 Methylmalonyl-CoA mutase F0T03_09950 PF00950 ABC 3 transport family F0T03_09955 PF00950 ABC 3 transport family F0T03_09960 PF00005 ABC transporter F0T03_09965 PF01297 Zinc-uptake complex component A periplasmic F0T03_09970 PF01464 Transglycosylase SLT domain F0T03_09975 PF01914 MarC family integral membrane protein F0T03_10000 PF04474 Protein of unknown function (DUF554) F0T03_10010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F0T03_10010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F0T03_10010 PF02824 TGS domain F0T03_10010 PF03129 Anticodon binding domain F0T03_10015 PF05198 Translation initiation factor IF-3, N-terminal domain F0T03_10015 PF00707 Translation initiation factor IF-3, C-terminal domain F0T03_10020 PF01632 Ribosomal protein L35 F0T03_10025 PF00453 Ribosomal protein L20 F0T03_10035 PF01409 tRNA synthetases class II core domain (F) F0T03_10035 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F0T03_10040 PF03484 tRNA synthetase B5 domain F0T03_10040 PF03147 Ferredoxin-fold anticodon binding domain F0T03_10040 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F0T03_10040 PF01588 Putative tRNA binding domain F0T03_10040 PF03483 B3/4 domain F0T03_10045 PF00216 Bacterial DNA-binding protein F0T03_10055 PF01032 FecCD transport family F0T03_10060 PF00255 Glutathione peroxidase F0T03_10065 PF00005 ABC transporter F0T03_10070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F0T03_10075 PF00535 Glycosyl transferase family 2 F0T03_10080 PF00551 Formyl transferase F0T03_10080 PF02911 Formyl transferase, C-terminal domain F0T03_10080 PF01370 NAD dependent epimerase/dehydratase family F0T03_10085 PF01522 Polysaccharide deacetylase F0T03_10090 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase F0T03_10095 PF00892 EamA-like transporter family F0T03_10105 PF00877 NlpC/P60 family F0T03_10110 PF03099 Biotin/lipoate A/B protein ligase family F0T03_10110 PF10437 Bacterial lipoate protein ligase C-terminus F0T03_10115 PF02696 Uncharacterized ACR, YdiU/UPF0061 family F0T03_10120 PF01497 Periplasmic binding protein F0T03_10125 PF05171 Haemin-degrading HemS.ChuX domain F0T03_10130 PF00593 TonB dependent receptor F0T03_10130 PF07715 TonB-dependent Receptor Plug Domain F0T03_10135 PF10636 Hemin uptake protein hemP F0T03_10140 PF00793 DAHP synthetase I family F0T03_10145 PF03618 Kinase/pyrophosphorylase F0T03_10150 PF02896 PEP-utilising enzyme, TIM barrel domain F0T03_10150 PF00391 PEP-utilising enzyme, mobile domain F0T03_10150 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain F0T03_10160 PF01594 AI-2E family transporter F0T03_10165 PF01565 FAD binding domain F0T03_10165 PF13183 4Fe-4S dicluster domain F0T03_10165 PF02913 FAD linked oxidases, C-terminal domain F0T03_10170 PF03061 Thioesterase superfamily F0T03_10180 PF01521 Iron-sulphur cluster biosynthesis F0T03_10185 PF01458 Uncharacterized protein family (UPF0051) F0T03_10190 PF00005 ABC transporter F0T03_10195 PF01458 Uncharacterized protein family (UPF0051) F0T03_10200 PF00266 Aminotransferase class-V F0T03_10205 PF02657 Fe-S metabolism associated domain F0T03_10210 PF17969 L,D-transpeptidase C-terminal domain F0T03_10210 PF01476 LysM domain F0T03_10210 PF03734 L,D-transpeptidase catalytic domain F0T03_10215 PF04728 Lipoprotein leucine-zipper F0T03_10220 PF00224 Pyruvate kinase, barrel domain F0T03_10220 PF02887 Pyruvate kinase, alpha/beta domain F0T03_10240 PF01554 MatE F0T03_10245 PF00677 Lumazine binding domain F0T03_10255 PF07690 Major Facilitator Superfamily F0T03_10260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_10260 PF03466 LysR substrate binding domain F0T03_10265 PF00356 Bacterial regulatory proteins, lacI family F0T03_10275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F0T03_10275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F0T03_10280 PF00877 NlpC/P60 family F0T03_10290 PF00462 Glutaredoxin F0T03_10295 PF00929 Exonuclease F0T03_10300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F0T03_10310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F0T03_10315 PF16925 Tetracyclin repressor-like, C-terminal domain F0T03_10315 PF00440 Bacterial regulatory proteins, tetR family F0T03_10320 PF00884 Sulfatase F0T03_10320 PF08019 Phosphoethanolamine transferase EptA/EptB F0T03_10325 PF06945 Protein of unknown function (DUF1289) F0T03_10330 PF00248 Aldo/keto reductase family F0T03_10335 PF04632 Fusaric acid resistance protein family F0T03_10340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_10340 PF00529 HlyD membrane-fusion protein of T1SS F0T03_10345 PF07869 Protein of unknown function (DUF1656) F0T03_10350 PF01047 MarR family F0T03_10355 PF05433 Glycine zipper 2TM domain F0T03_10360 PF03702 Anhydro-N-acetylmuramic acid kinase F0T03_10365 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme F0T03_10370 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region F0T03_10370 PF01243 Pyridoxamine 5'-phosphate oxidase F0T03_10375 PF01479 S4 domain F0T03_10375 PF00579 tRNA synthetases class I (W and Y) F0T03_10380 PF08543 Phosphomethylpyrimidine kinase F0T03_10385 PF02798 Glutathione S-transferase, N-terminal domain F0T03_10385 PF00043 Glutathione S-transferase, C-terminal domain F0T03_10390 PF11656 YjbD family (DUF3811) F0T03_10395 PF04893 Yip1 domain F0T03_10405 PF00854 POT family F0T03_10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_10410 PF03466 LysR substrate binding domain F0T03_10425 PF00005 ABC transporter F0T03_10430 PF00005 ABC transporter F0T03_10430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0T03_10435 PF12911 N-terminal TM domain of oligopeptide transport permease C F0T03_10435 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_10440 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_10445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_10460 PF02954 Bacterial regulatory protein, Fis family F0T03_10460 PF00158 Sigma-54 interaction domain F0T03_10465 PF04012 PspA/IM30 family F0T03_10470 PF06667 Phage shock protein B F0T03_10475 PF04024 PspC domain F0T03_10485 PF04317 YcjX-like family, DUF463 F0T03_10490 PF05128 Domain of unknown function (DUF697) F0T03_10505 PF00158 Sigma-54 interaction domain F0T03_10505 PF18024 Helix-turn-helix domain F0T03_10510 PF08534 Redoxin F0T03_10515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F0T03_10515 PF13378 Enolase C-terminal domain-like F0T03_10520 PF00246 Zinc carboxypeptidase F0T03_10525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_10540 PF01544 CorA-like Mg2+ transporter protein F0T03_10545 PF01171 PP-loop family F0T03_10550 PF00388 Phosphatidylinositol-specific phospholipase C, X domain F0T03_10560 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II F0T03_10560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase F0T03_10560 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg F0T03_10560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0T03_10560 PF10371 Domain of unknown function F0T03_10565 PF00893 Small Multidrug Resistance protein F0T03_10570 PF02308 MgtC family F0T03_10580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F0T03_10580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0T03_10585 PF11739 Dicarboxylate transport F0T03_10590 PF13617 YnbE-like lipoprotein F0T03_10595 PF07027 Protein of unknown function (DUF1318) F0T03_10600 PF02525 Flavodoxin-like fold F0T03_10610 PF00270 DEAD/DEAH box helicase F0T03_10610 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold F0T03_10610 PF00271 Helicase conserved C-terminal domain F0T03_10610 PF04408 Helicase associated domain (HA2) F0T03_10610 PF11898 Domain of unknown function (DUF3418) F0T03_10615 PF05973 Phage derived protein Gp49-like (DUF891) F0T03_10625 PF00089 Trypsin F0T03_10635 PF02074 Carboxypeptidase Taq (M32) metallopeptidase F0T03_10640 PF00512 His Kinase A (phospho-acceptor) domain F0T03_10640 PF00672 HAMP domain F0T03_10640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_10645 PF00486 Transcriptional regulatory protein, C terminal F0T03_10645 PF00072 Response regulator receiver domain F0T03_10655 PF13520 Amino acid permease F0T03_10660 PF07338 Protein of unknown function (DUF1471) F0T03_10665 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F0T03_10665 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F0T03_10665 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch F0T03_10670 PF02233 NAD(P) transhydrogenase beta subunit F0T03_10675 PF00582 Universal stress protein family F0T03_10680 PF00027 Cyclic nucleotide-binding domain F0T03_10680 PF13545 Crp-like helix-turn-helix domain F0T03_10685 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F0T03_10685 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F0T03_10700 PF06445 GyrI-like small molecule binding domain F0T03_10710 PF00245 Alkaline phosphatase F0T03_10715 PF00294 pfkB family carbohydrate kinase F0T03_10720 PF07690 Major Facilitator Superfamily F0T03_10735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_10735 PF03466 LysR substrate binding domain F0T03_10745 PF13419 Haloacid dehalogenase-like hydrolase F0T03_10750 PF01842 ACT domain F0T03_10755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0T03_10755 PF00205 Thiamine pyrophosphate enzyme, central domain F0T03_10755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0T03_10770 PF01510 N-acetylmuramoyl-L-alanine amidase F0T03_10790 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus F0T03_10790 PF01048 Phosphorylase superfamily F0T03_10800 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_10805 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_10810 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_10815 PF01037 Lrp/AsnC ligand binding domain F0T03_10825 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_10825 PF18113 Rubredoxin binding C-terminal domain F0T03_10830 PF00258 Flavodoxin F0T03_10830 PF00753 Metallo-beta-lactamase superfamily F0T03_10830 PF00301 Rubredoxin F0T03_10835 PF00158 Sigma-54 interaction domain F0T03_10835 PF01590 GAF domain F0T03_10840 PF02798 Glutathione S-transferase, N-terminal domain F0T03_10860 PF07690 Major Facilitator Superfamily F0T03_10865 PF00106 short chain dehydrogenase F0T03_10870 PF02694 Uncharacterised BCR, YnfA/UPF0060 family F0T03_10875 PF06932 Protein of unknown function (DUF1283) F0T03_10880 PF06649 Protein of unknown function (DUF1161) F0T03_10885 PF00654 Voltage gated chloride channel F0T03_10900 PF00480 ROK family F0T03_10905 PF03466 LysR substrate binding domain F0T03_10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_10910 PF07690 Major Facilitator Superfamily F0T03_10925 PF05472 DNA replication terminus site-binding protein (Ter protein) F0T03_10930 PF00206 Lyase F0T03_10930 PF10415 Fumarase C C-terminus F0T03_10935 PF01238 Phosphomannose isomerase type I F0T03_10940 PF06097 Bacterial protein of unknown function (DUF945) F0T03_10945 PF00356 Bacterial regulatory proteins, lacI family F0T03_10945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F0T03_10950 PF02378 Phosphotransferase system, EIIC F0T03_10950 PF00367 phosphotransferase system, EIIB F0T03_10955 PF00155 Aminotransferase class I and II F0T03_10960 PF00962 Adenosine/AMP deaminase F0T03_10965 PF13593 SBF-like CPA transporter family (DUF4137) F0T03_10970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F0T03_10970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F0T03_10975 PF12833 Helix-turn-helix domain F0T03_10975 PF02311 AraC-like ligand binding domain F0T03_10980 PF02653 Branched-chain amino acid transport system / permease component F0T03_10985 PF00005 ABC transporter F0T03_10990 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F0T03_10995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F0T03_11000 PF11762 L-arabinose isomerase C-terminal domain F0T03_11000 PF02610 L-arabinose isomerase F0T03_11005 PF00005 ABC transporter F0T03_11005 PF03412 Peptidase C39 family F0T03_11005 PF00664 ABC transporter transmembrane region F0T03_11010 PF13533 Biotin-lipoyl like F0T03_11015 PF00005 ABC transporter F0T03_11015 PF03412 Peptidase C39 family F0T03_11015 PF00664 ABC transporter transmembrane region F0T03_11020 PF01268 Formate--tetrahydrofolate ligase F0T03_11025 PF10754 Protein of unknown function (DUF2569) F0T03_11030 PF02508 Rnf-Nqr subunit, membrane protein F0T03_11035 PF04060 Putative Fe-S cluster F0T03_11040 PF13375 RnfC Barrel sandwich hybrid domain F0T03_11040 PF13237 4Fe-4S dicluster domain F0T03_11040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F0T03_11040 PF10531 SLBB domain F0T03_11045 PF06445 GyrI-like small molecule binding domain F0T03_11045 PF12833 Helix-turn-helix domain F0T03_11050 PF03116 NQR2, RnfD, RnfE family F0T03_11055 PF04205 FMN-binding domain F0T03_11060 PF02508 Rnf-Nqr subunit, membrane protein F0T03_11065 PF00633 Helix-hairpin-helix motif F0T03_11065 PF10576 Iron-sulfur binding domain of endonuclease III F0T03_11065 PF00730 HhH-GPD superfamily base excision DNA repair protein F0T03_11085 PF00384 Molybdopterin oxidoreductase F0T03_11090 PF00773 RNB domain F0T03_11090 PF00575 S1 RNA binding domain F0T03_11090 PF08206 Ribonuclease B OB domain F0T03_11095 PF13722 5TM C-terminal transporter carbon starvation CstA F0T03_11095 PF02554 Carbon starvation protein CstA F0T03_11100 PF04328 Selenoprotein, putative F0T03_11105 PF00923 Transaldolase/Fructose-6-phosphate aldolase F0T03_11110 PF08220 DeoR-like helix-turn-helix domain F0T03_11110 PF00455 DeoR C terminal sensor domain F0T03_11120 PF00596 Class II Aldolase and Adducin N-terminal domain F0T03_11125 PF05433 Glycine zipper 2TM domain F0T03_11130 PF01253 Translation initiation factor SUI1 F0T03_11135 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F0T03_11140 PF07338 Protein of unknown function (DUF1471) F0T03_11145 PF03594 Benzoate membrane transport protein F0T03_11150 PF01381 Helix-turn-helix F0T03_11150 PF07883 Cupin domain F0T03_11160 PF18073 Rubredoxin metal binding domain F0T03_11165 PF06305 Lipopolysaccharide assembly protein A domain F0T03_11170 PF01569 PAP2 superfamily F0T03_11175 PF00925 GTP cyclohydrolase II F0T03_11180 PF00694 Aconitase C-terminal domain F0T03_11180 PF00330 Aconitase family (aconitate hydratase) F0T03_11195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_11195 PF03466 LysR substrate binding domain F0T03_11200 PF01396 Topoisomerase DNA binding C4 zinc finger F0T03_11200 PF08272 Topoisomerase I zinc-ribbon-like F0T03_11200 PF01751 Toprim domain F0T03_11200 PF01131 DNA topoisomerase F0T03_11205 PF10692 Protein of unknown function (DUF2498) F0T03_11210 PF08496 Peptidase family S49 N-terminal F0T03_11210 PF01343 Peptidase family S49 F0T03_11215 PF00106 short chain dehydrogenase F0T03_11220 PF12557 Cob(I)alamin adenosyltransferase N terminal F0T03_11220 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP F0T03_11225 PF01479 S4 domain F0T03_11225 PF00849 RNA pseudouridylate synthase F0T03_11230 PF00196 Bacterial regulatory proteins, luxR family F0T03_11230 PF00072 Response regulator receiver domain F0T03_11245 PF09134 Invasin, domain 3 F0T03_11245 PF11924 Inverse autotransporter, beta-domain F0T03_11245 PF02369 Bacterial Ig-like domain (group 1) F0T03_11255 PF00072 Response regulator receiver domain F0T03_11255 PF00196 Bacterial regulatory proteins, luxR family F0T03_11260 PF03797 Autotransporter beta-domain F0T03_11265 PF01300 Telomere recombination F0T03_11270 PF02811 PHP domain F0T03_11280 PF04715 Anthranilate synthase component I, N terminal region F0T03_11280 PF00425 chorismate binding enzyme F0T03_11285 PF00117 Glutamine amidotransferase class-I F0T03_11290 PF00591 Glycosyl transferase family, a/b domain F0T03_11290 PF02885 Glycosyl transferase family, helical bundle domain F0T03_11295 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F0T03_11295 PF00218 Indole-3-glycerol phosphate synthase F0T03_11300 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_11305 PF00290 Tryptophan synthase alpha chain F0T03_11315 PF03922 OmpW family F0T03_11320 PF03692 Putative zinc- or iron-chelating domain F0T03_11335 PF04279 Intracellular septation protein A F0T03_11340 PF03061 Thioesterase superfamily F0T03_11345 PF03544 Gram-negative bacterial TonB protein C-terminal F0T03_11350 PF03795 YCII-related domain F0T03_11375 PF13396 Phospholipase_D-nuclease N-terminal F0T03_11375 PF13091 PLD-like domain F0T03_11380 PF04269 Protein of unknown function, DUF440 F0T03_11385 PF00005 ABC transporter F0T03_11385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0T03_11390 PF00005 ABC transporter F0T03_11390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0T03_11395 PF12911 N-terminal TM domain of oligopeptide transport permease C F0T03_11395 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_11400 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_11405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_11410 PF01914 MarC family integral membrane protein F0T03_11420 PF00465 Iron-containing alcohol dehydrogenase F0T03_11420 PF00171 Aldehyde dehydrogenase family F0T03_11425 PF00265 Thymidine kinase F0T03_11435 PF00816 H-NS histone family F0T03_11440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F0T03_11440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F0T03_11440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F0T03_11445 PF00072 Response regulator receiver domain F0T03_11450 PF01734 Patatin-like phospholipase F0T03_11460 PF02810 SEC-C motif F0T03_11465 PF01842 ACT domain F0T03_11465 PF00551 Formyl transferase F0T03_11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_11480 PF03466 LysR substrate binding domain F0T03_11485 PF03372 Endonuclease/Exonuclease/phosphatase family F0T03_11490 PF00293 NUDIX domain F0T03_11495 PF07383 Protein of unknown function (DUF1496) F0T03_11500 PF01131 DNA topoisomerase F0T03_11500 PF01751 Toprim domain F0T03_11505 PF00586 AIR synthase related protein, N-terminal domain F0T03_11505 PF02769 AIR synthase related protein, C-terminal domain F0T03_11510 PF00881 Nitroreductase family F0T03_11515 PF01343 Peptidase family S49 F0T03_11520 PF17763 Glutaminase/Asparaginase C-terminal domain F0T03_11520 PF00710 Asparaginase, N-terminal F0T03_11530 PF07023 Protein of unknown function (DUF1315) F0T03_11535 PF01641 SelR domain F0T03_11540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F0T03_11540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F0T03_11545 PF01263 Aldose 1-epimerase F0T03_11550 PF06629 MltA-interacting protein MipA F0T03_11560 PF06798 PrkA serine protein kinase C-terminal domain F0T03_11560 PF08298 PrkA AAA domain F0T03_11565 PF04285 Protein of unknown function (DUF444) F0T03_11580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_11580 PF03466 LysR substrate binding domain F0T03_11585 PF05726 Pirin C-terminal cupin domain F0T03_11585 PF02678 Pirin F0T03_11590 PF00563 EAL domain F0T03_11590 PF13426 PAS domain F0T03_11590 PF00990 Diguanylate cyclase, GGDEF domain F0T03_11595 PF07690 Major Facilitator Superfamily F0T03_11600 PF01168 Alanine racemase, N-terminal domain F0T03_11600 PF00842 Alanine racemase, C-terminal domain F0T03_11605 PF01266 FAD dependent oxidoreductase F0T03_11610 PF04293 SpoVR like protein F0T03_11615 PF07840 FadR C-terminal domain F0T03_11615 PF00392 Bacterial regulatory proteins, gntR family F0T03_11620 PF06450 Bacterial Na+/H+ antiporter B (NhaB) F0T03_11625 PF02600 Disulfide bond formation protein DsbB F0T03_11635 PF03692 Putative zinc- or iron-chelating domain F0T03_11640 PF01557 Fumarylacetoacetate (FAA) hydrolase family F0T03_11645 PF13406 Transglycosylase SLT domain F0T03_11650 PF05166 YcgL domain F0T03_11660 PF03775 Septum formation inhibitor MinC, C-terminal domain F0T03_11660 PF05209 Septum formation inhibitor MinC, N-terminal domain F0T03_11665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F0T03_11670 PF03776 Septum formation topological specificity factor MinE F0T03_11675 PF01612 3'-5' exonuclease F0T03_11675 PF00570 HRDC domain F0T03_11680 PF13193 AMP-binding enzyme C-terminal domain F0T03_11680 PF00501 AMP-binding enzyme F0T03_11685 PF03843 Outer membrane lipoprotein Slp family F0T03_11690 PF00814 Glycoprotease family F0T03_11695 PF04851 Type III restriction enzyme, res subunit F0T03_11695 PF13307 Helicase C-terminal domain F0T03_11700 PF01042 Endoribonuclease L-PSP F0T03_11705 PF00893 Small Multidrug Resistance protein F0T03_11710 PF00893 Small Multidrug Resistance protein F0T03_11715 PF01081 KDPG and KHG aldolase F0T03_11720 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F0T03_11720 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F0T03_11730 PF01418 Helix-turn-helix domain, rpiR family F0T03_11730 PF01380 SIS domain F0T03_11735 PF02887 Pyruvate kinase, alpha/beta domain F0T03_11735 PF00224 Pyruvate kinase, barrel domain F0T03_11740 PF03279 Bacterial lipid A biosynthesis acyltransferase F0T03_11745 PF08525 Opacity-associated protein A N-terminal motif F0T03_11745 PF01476 LysM domain F0T03_11745 PF01551 Peptidase family M23 F0T03_11750 PF01297 Zinc-uptake complex component A periplasmic F0T03_11755 PF00005 ABC transporter F0T03_11760 PF00950 ABC 3 transport family F0T03_11765 PF00854 POT family F0T03_11770 PF05491 RuvB C-terminal winged helix domain F0T03_11770 PF05496 Holliday junction DNA helicase RuvB P-loop domain F0T03_11770 PF17864 RuvB AAA lid domain F0T03_11775 PF01330 RuvA N terminal domain F0T03_11775 PF07499 RuvA, C-terminal domain F0T03_11780 PF02075 Crossover junction endodeoxyribonuclease RuvC F0T03_11785 PF01709 Transcriptional regulator F0T03_11790 PF00293 NUDIX domain F0T03_11795 PF01336 OB-fold nucleic acid binding domain F0T03_11795 PF00152 tRNA synthetases class II (D, K and N) F0T03_11795 PF02938 GAD domain F0T03_11805 PF00857 Isochorismatase family F0T03_11810 PF01904 Protein of unknown function DUF72 F0T03_11815 PF01124 MAPEG family F0T03_11820 PF13649 Methyltransferase domain F0T03_11825 PF08003 Protein of unknown function (DUF1698) F0T03_11830 PF03932 CutC family F0T03_11835 PF06185 YecM protein F0T03_11840 PF00750 tRNA synthetases class I (R) F0T03_11840 PF03485 Arginyl tRNA synthetase N terminal domain F0T03_11840 PF05746 DALR anticodon binding domain F0T03_11845 PF03023 Lipid II flippase MurJ F0T03_11850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F0T03_11855 PF04337 Protein of unknown function, DUF480 F0T03_11860 PF13302 Acetyltransferase (GNAT) domain F0T03_11865 PF07690 Major Facilitator Superfamily F0T03_11870 PF07273 Protein of unknown function (DUF1439) F0T03_11875 PF02613 Nitrate reductase delta subunit F0T03_11880 PF02811 PHP domain F0T03_11885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0T03_11895 PF03009 Glycerophosphoryl diester phosphodiesterase family F0T03_11905 PF07694 5TMR of 5TMR-LYT F0T03_11905 PF00990 Diguanylate cyclase, GGDEF domain F0T03_11910 PF01740 STAS domain F0T03_11910 PF00916 Sulfate permease family F0T03_11915 PF00793 DAHP synthetase I family F0T03_11920 PF13369 Transglutaminase-like superfamily F0T03_11925 PF04247 Invasion gene expression up-regulator, SirB F0T03_11930 PF13847 Methyltransferase domain F0T03_11930 PF17827 PrmC N-terminal domain F0T03_11935 PF03462 PCRF domain F0T03_11935 PF00472 RF-1 domain F0T03_11940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain F0T03_11940 PF01488 Shikimate / quinate 5-dehydrogenase F0T03_11940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain F0T03_11945 PF03550 Outer membrane lipoprotein LolB F0T03_11950 PF08544 GHMP kinases C terminal F0T03_11950 PF00288 GHMP kinases N terminal domain F0T03_11955 PF14572 Phosphoribosyl synthetase-associated domain F0T03_11955 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F0T03_11970 PF10762 Protein of unknown function (DUF2583) F0T03_11975 PF01195 Peptidyl-tRNA hydrolase F0T03_11985 PF06071 Protein of unknown function (DUF933) F0T03_11985 PF01926 50S ribosome-binding GTPase F0T03_11990 PF13356 Arm DNA-binding domain F0T03_11990 PF00589 Phage integrase family F0T03_11995 PF00561 alpha/beta hydrolase fold F0T03_12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_12000 PF03466 LysR substrate binding domain F0T03_12005 PF01177 Asp/Glu/Hydantoin racemase F0T03_12010 PF00589 Phage integrase family F0T03_12010 PF18644 Phage integrase SAM-like domain F0T03_12085 PF00589 Phage integrase family F0T03_12085 PF02899 Phage integrase, N-terminal SAM-like domain F0T03_12090 PF04002 RadC-like JAB domain F0T03_12115 PF13693 Winged helix-turn-helix DNA-binding F0T03_12155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_12155 PF00529 HlyD membrane-fusion protein of T1SS F0T03_12160 PF00873 AcrB/AcrD/AcrF family F0T03_12165 PF07690 Major Facilitator Superfamily F0T03_12170 PF03811 InsA N-terminal domain F0T03_12170 PF12759 InsA C-terminal domain F0T03_12195 PF01022 Bacterial regulatory protein, arsR family F0T03_12200 PF02040 Arsenical pump membrane protein F0T03_12205 PF03960 ArsC family F0T03_12210 PF12833 Helix-turn-helix domain F0T03_12215 PF00873 AcrB/AcrD/AcrF family F0T03_12220 PF00529 HlyD membrane-fusion protein of T1SS F0T03_12220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_12225 PF00486 Transcriptional regulatory protein, C terminal F0T03_12225 PF00072 Response regulator receiver domain F0T03_12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_12230 PF00512 His Kinase A (phospho-acceptor) domain F0T03_12230 PF00672 HAMP domain F0T03_12240 PF08220 DeoR-like helix-turn-helix domain F0T03_12240 PF00455 DeoR C terminal sensor domain F0T03_12245 PF08013 Tagatose 6 phosphate kinase F0T03_12250 PF03830 PTS system sorbose subfamily IIB component F0T03_12255 PF03609 PTS system sorbose-specific iic component F0T03_12260 PF03613 PTS system mannose/fructose/sorbose family IID component F0T03_12265 PF03610 PTS system fructose IIA component F0T03_12270 PF01380 SIS domain F0T03_12275 PF01116 Fructose-bisphosphate aldolase class-II F0T03_12280 PF01476 LysM domain F0T03_12280 PF01551 Peptidase family M23 F0T03_12290 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment F0T03_12295 PF02653 Branched-chain amino acid transport system / permease component F0T03_12300 PF00005 ABC transporter F0T03_12305 PF13407 Periplasmic binding protein domain F0T03_12310 PF05962 HutD F0T03_12315 PF01979 Amidohydrolase family F0T03_12320 PF00392 Bacterial regulatory proteins, gntR family F0T03_12320 PF07702 UTRA domain F0T03_12325 PF01979 Amidohydrolase family F0T03_12335 PF00267 Gram-negative porin F0T03_12340 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family F0T03_12345 PF04996 Succinylarginine dihydrolase F0T03_12350 PF00171 Aldehyde dehydrogenase family F0T03_12355 PF04958 Arginine N-succinyltransferase beta subunit F0T03_12360 PF00202 Aminotransferase class-III F0T03_12370 PF00392 Bacterial regulatory proteins, gntR family F0T03_12370 PF00155 Aminotransferase class I and II F0T03_12375 PF01654 Cytochrome bd terminal oxidase subunit I F0T03_12380 PF02322 Cytochrome bd terminal oxidase subunit II F0T03_12390 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term F0T03_12390 PF07730 Histidine kinase F0T03_12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_12390 PF00672 HAMP domain F0T03_12395 PF03466 LysR substrate binding domain F0T03_12395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_12400 PF07690 Major Facilitator Superfamily F0T03_12410 PF01699 Sodium/calcium exchanger protein F0T03_12415 PF02562 PhoH-like protein F0T03_12430 PF13994 PgaD-like protein F0T03_12435 PF00535 Glycosyl transferase family 2 F0T03_12440 PF01522 Polysaccharide deacetylase F0T03_12440 PF14883 Hypothetical glycosyl hydrolase family 13 F0T03_12450 PF01321 Creatinase/Prolidase N-terminal domain F0T03_12450 PF00557 Metallopeptidase family M24 F0T03_12460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F0T03_12460 PF01411 tRNA synthetases class II (A) F0T03_12460 PF02272 DHHA1 domain F0T03_12465 PF03466 LysR substrate binding domain F0T03_12465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_12470 PF09313 Domain of unknown function (DUF1971) F0T03_12470 PF03848 Tellurite resistance protein TehB F0T03_12480 PF00578 AhpC/TSA family F0T03_12485 PF02687 FtsX-like permease family F0T03_12485 PF12704 MacB-like periplasmic core domain F0T03_12485 PF00005 ABC transporter F0T03_12495 PF12704 MacB-like periplasmic core domain F0T03_12495 PF00005 ABC transporter F0T03_12495 PF02687 FtsX-like permease family F0T03_12505 PF10634 Fe2+ transport protein F0T03_12510 PF03239 Iron permease FTR1 family F0T03_12525 PF04960 Glutaminase F0T03_12530 PF01261 Xylose isomerase-like TIM barrel F0T03_12535 PF00596 Class II Aldolase and Adducin N-terminal domain F0T03_12540 PF07005 Sugar-binding N-terminal domain F0T03_12540 PF17042 Nucleotide-binding C-terminal domain F0T03_12545 PF08220 DeoR-like helix-turn-helix domain F0T03_12545 PF00455 DeoR C terminal sensor domain F0T03_12550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F0T03_12550 PF17203 Single cache domain 3 F0T03_12550 PF00989 PAS fold F0T03_12550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_12555 PF00072 Response regulator receiver domain F0T03_12560 PF03390 2-hydroxycarboxylate transporter family F0T03_12565 PF00324 Amino acid permease F0T03_12580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F0T03_12590 PF07690 Major Facilitator Superfamily F0T03_12600 PF16326 ABC transporter C-terminal domain F0T03_12600 PF12848 ABC transporter F0T03_12600 PF00005 ABC transporter F0T03_12605 PF00849 RNA pseudouridylate synthase F0T03_12610 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) F0T03_12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_12620 PF03466 LysR substrate binding domain F0T03_12680 PF01042 Endoribonuclease L-PSP F0T03_12690 PF00959 Phage lysozyme F0T03_12730 PF01596 O-methyltransferase F0T03_12740 PF00665 Integrase core domain F0T03_12740 PF13936 Helix-turn-helix domain F0T03_12750 PF06530 Phage antitermination protein Q F0T03_12755 PF06147 Protein of unknown function (DUF968) F0T03_12805 PF01381 Helix-turn-helix F0T03_12805 PF00717 Peptidase S24-like F0T03_12820 PF10065 Uncharacterized conserved protein (DUF2303) F0T03_12875 PF01066 CDP-alcohol phosphatidyltransferase F0T03_12880 PF08459 UvrC Helix-hairpin-helix N-terminal F0T03_12880 PF01541 GIY-YIG catalytic domain F0T03_12880 PF02151 UvrB/uvrC motif F0T03_12885 PF00196 Bacterial regulatory proteins, luxR family F0T03_12885 PF00072 Response regulator receiver domain F0T03_12890 PF10769 Protein of unknown function (DUF2594) F0T03_12895 PF06942 GlpM protein F0T03_12905 PF00128 Alpha amylase, catalytic domain F0T03_12905 PF02806 Alpha amylase, C-terminal all-beta domain F0T03_12920 PF08241 Methyltransferase domain F0T03_12940 PF00324 Amino acid permease F0T03_12950 PF01161 Phosphatidylethanolamine-binding protein F0T03_12955 PF01344 Kelch motif F0T03_12965 PF03358 NADPH-dependent FMN reductase F0T03_12970 PF04261 Dyp-type peroxidase family F0T03_12975 PF09375 Imelysin F0T03_12975 PF13473 Cupredoxin-like domain F0T03_12980 PF03239 Iron permease FTR1 family F0T03_12985 PF00474 Sodium:solute symporter family F0T03_12990 PF14850 DNA-binding domain of Proline dehydrogenase F0T03_12990 PF01619 Proline dehydrogenase F0T03_12990 PF00171 Aldehyde dehydrogenase family F0T03_12990 PF18327 Proline utilization A proline dehydrogenase N-terminal domain F0T03_13020 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_13025 PF02899 Phage integrase, N-terminal SAM-like domain F0T03_13030 PF04542 Sigma-70 region 2 F0T03_13030 PF04539 Sigma-70 region 3 F0T03_13030 PF04545 Sigma-70, region 4 F0T03_13035 PF08884 Flagellin D3 domain F0T03_13035 PF00700 Bacterial flagellin C-terminal helical region F0T03_13035 PF00669 Bacterial flagellin N-terminal helical region F0T03_13040 PF07196 Flagellin hook IN motif F0T03_13040 PF07195 Flagellar hook-associated protein 2 C-terminus F0T03_13040 PF02465 Flagellar hook-associated protein 2 N-terminus F0T03_13045 PF02561 Flagellar protein FliS F0T03_13050 PF05400 Flagellar protein FliT F0T03_13055 PF12833 Helix-turn-helix domain F0T03_13060 PF01966 HD domain F0T03_13075 PF02049 Flagellar hook-basal body complex protein FliE F0T03_13080 PF08345 Flagellar M-ring protein C-terminal F0T03_13080 PF01514 Secretory protein of YscJ/FliF family F0T03_13085 PF14842 FliG N-terminal domain F0T03_13085 PF14841 FliG middle domain F0T03_13085 PF01706 FliG C-terminal domain F0T03_13090 PF02108 Flagellar assembly protein FliH F0T03_13095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F0T03_13095 PF18269 T3SS EscN ATPase C-terminal domain F0T03_13100 PF02050 Flagellar FliJ protein F0T03_13105 PF02120 Flagellar hook-length control protein FliK F0T03_13110 PF03748 Flagellar basal body-associated protein FliL F0T03_13115 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F0T03_13115 PF02154 Flagellar motor switch protein FliM F0T03_13120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F0T03_13120 PF16973 Flagellar motor switch protein FliN N-terminal F0T03_13125 PF04347 Flagellar biosynthesis protein, FliO F0T03_13130 PF00813 FliP family F0T03_13135 PF01313 Bacterial export proteins, family 3 F0T03_13140 PF01311 Bacterial export proteins, family 1 F0T03_13145 PF00669 Bacterial flagellin N-terminal helical region F0T03_13150 PF00460 Flagella basal body rod protein F0T03_13150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F0T03_13155 PF10135 Rod binding protein F0T03_13155 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F0T03_13160 PF02119 Flagellar P-ring protein F0T03_13165 PF02107 Flagellar L-ring protein F0T03_13170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F0T03_13170 PF00460 Flagella basal body rod protein F0T03_13175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F0T03_13175 PF00460 Flagella basal body rod protein F0T03_13180 PF00460 Flagella basal body rod protein F0T03_13180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F0T03_13180 PF07559 Flagellar basal body protein FlaE F0T03_13185 PF03963 Flagellar hook capping protein - N-terminal region F0T03_13185 PF13860 FlgD Ig-like domain F0T03_13185 PF13861 FlgD Tudor-like domain F0T03_13190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F0T03_13190 PF00460 Flagella basal body rod protein F0T03_13195 PF00460 Flagella basal body rod protein F0T03_13200 PF13144 Chaperone for flagella basal body P-ring formation F0T03_13200 PF17656 FlgA N-terminal domain F0T03_13205 PF04316 Anti-sigma-28 factor, FlgM F0T03_13210 PF05130 FlgN protein F0T03_13215 PF06366 Flagellar protein FlhE F0T03_13220 PF00771 FHIPEP family F0T03_13225 PF01312 FlhB HrpN YscU SpaS Family F0T03_13230 PF04344 Chemotaxis phosphatase, CheZ F0T03_13235 PF00072 Response regulator receiver domain F0T03_13240 PF00072 Response regulator receiver domain F0T03_13240 PF01339 CheB methylesterase F0T03_13245 PF01739 CheR methyltransferase, SAM binding domain F0T03_13245 PF03705 CheR methyltransferase, all-alpha domain F0T03_13250 PF02203 Tar ligand binding domain homologue F0T03_13250 PF00672 HAMP domain F0T03_13250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_13255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_13255 PF00672 HAMP domain F0T03_13255 PF02203 Tar ligand binding domain homologue F0T03_13260 PF01584 CheW-like domain F0T03_13265 PF02895 Signal transducing histidine kinase, homodimeric domain F0T03_13265 PF01627 Hpt domain F0T03_13265 PF01584 CheW-like domain F0T03_13265 PF09078 CheY binding F0T03_13265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_13270 PF13677 Membrane MotB of proton-channel complex MotA/MotB F0T03_13270 PF00691 OmpA family F0T03_13275 PF01618 MotA/TolQ/ExbB proton channel family F0T03_13280 PF05280 Flagellar transcriptional activator (FlhC) F0T03_13285 PF05247 Flagellar transcriptional activator (FlhD) F0T03_13290 PF00582 Universal stress protein family F0T03_13295 PF00107 Zinc-binding dehydrogenase F0T03_13295 PF16884 N-terminal domain of oxidoreductase F0T03_13300 PF00689 Cation transporting ATPase, C-terminus F0T03_13300 PF00690 Cation transporter/ATPase, N-terminus F0T03_13305 PF02308 MgtC family F0T03_13310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_13310 PF00672 HAMP domain F0T03_13310 PF02203 Tar ligand binding domain homologue F0T03_13315 PF10781 Dextransucrase DSRB F0T03_13320 PF00313 'Cold-shock' DNA-binding domain F0T03_13325 PF00356 Bacterial regulatory proteins, lacI family F0T03_13330 PF00703 Glycosyl hydrolases family 2 F0T03_13330 PF02929 Beta galactosidase small chain F0T03_13330 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F0T03_13330 PF02837 Glycosyl hydrolases family 2, sugar binding domain F0T03_13330 PF16353 Domain of unknown function(DUF4981) F0T03_13335 PF08240 Alcohol dehydrogenase GroES-like domain F0T03_13335 PF00107 Zinc-binding dehydrogenase F0T03_13335 PF16197 Ketoacyl-synthetase C-terminal extension F0T03_13335 PF00109 Beta-ketoacyl synthase, N-terminal domain F0T03_13335 PF02801 Beta-ketoacyl synthase, C-terminal domain F0T03_13335 PF08659 KR domain F0T03_13335 PF00550 Phosphopantetheine attachment site F0T03_13335 PF14765 Polyketide synthase dehydratase F0T03_13335 PF00698 Acyl transferase domain F0T03_13340 PF10777 Inner membrane protein YlaC F0T03_13355 PF14001 YdfZ protein F0T03_13360 PF00328 Histidine phosphatase superfamily (branch 2) F0T03_13365 PF00483 Nucleotidyl transferase F0T03_13375 PF00782 Dual specificity phosphatase, catalytic domain F0T03_13380 PF12147 Putative methyltransferase F0T03_13380 PF12146 Serine aminopeptidase, S33 F0T03_13395 PF01066 CDP-alcohol phosphatidyltransferase F0T03_13400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F0T03_13400 PF02753 Pili assembly chaperone PapD, C-terminal domain F0T03_13410 PF00577 Outer membrane usher protein F0T03_13410 PF13954 PapC N-terminal domain F0T03_13410 PF13953 PapC C-terminal domain F0T03_13415 PF02753 Pili assembly chaperone PapD, C-terminal domain F0T03_13415 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F0T03_13425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F0T03_13430 PF13954 PapC N-terminal domain F0T03_13430 PF00577 Outer membrane usher protein F0T03_13430 PF13953 PapC C-terminal domain F0T03_13450 PF06167 Glucose-regulated metallo-peptidase M90 F0T03_13460 PF13356 Arm DNA-binding domain F0T03_13460 PF00589 Phage integrase family F0T03_13465 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F0T03_13470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F0T03_13485 PF03466 LysR substrate binding domain F0T03_13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_13490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_13490 PF03466 LysR substrate binding domain F0T03_13515 PF03466 LysR substrate binding domain F0T03_13515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_13520 PF00144 Beta-lactamase F0T03_13525 PF00881 Nitroreductase family F0T03_13530 PF00106 short chain dehydrogenase F0T03_13540 PF00171 Aldehyde dehydrogenase family F0T03_13560 PF01555 DNA methylase F0T03_13560 PF18755 Restriction Enzyme Adenine Methylase Associated F0T03_13570 PF00665 Integrase core domain F0T03_13570 PF13936 Helix-turn-helix domain F0T03_13580 PF07693 KAP family P-loop domain F0T03_13585 PF01548 Transposase F0T03_13585 PF02371 Transposase IS116/IS110/IS902 family F0T03_13590 PF18818 Metallopeptidase superfamily domain F0T03_13590 PF08401 Domain of unknown function (DUF1738) F0T03_13625 PF00145 C-5 cytosine-specific DNA methylase F0T03_13630 PF04237 YjbR F0T03_13635 PF07690 Major Facilitator Superfamily F0T03_13640 PF00440 Bacterial regulatory proteins, tetR family F0T03_13640 PF18665 Tetracyclin repressor-like, C-terminal domain F0T03_13655 PF00392 Bacterial regulatory proteins, gntR family F0T03_13655 PF00155 Aminotransferase class I and II F0T03_13665 PF17837 4'-phosphopantetheinyl transferase N-terminal domain F0T03_13665 PF01648 4'-phosphopantetheinyl transferase superfamily F0T03_13670 PF03480 Bacterial extracellular solute-binding protein, family 7 F0T03_13680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F0T03_13685 PF00939 Sodium:sulfate symporter transmembrane region F0T03_13690 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase F0T03_13695 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase F0T03_13700 PF04223 Citrate lyase, alpha subunit (CitF) F0T03_13705 PF03328 HpcH/HpaI aldolase/citrate lyase family F0T03_13710 PF06857 Malonate decarboxylase delta subunit (MdcD) F0T03_13715 PF08218 Citrate lyase ligase C-terminal domain F0T03_13720 PF00989 PAS fold F0T03_13720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_13720 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F0T03_13720 PF17203 Single cache domain 3 F0T03_13725 PF00072 Response regulator receiver domain F0T03_13725 PF12431 Transcriptional regulator F0T03_13730 PF00196 Bacterial regulatory proteins, luxR family F0T03_13730 PF00072 Response regulator receiver domain F0T03_13735 PF05231 MASE1 F0T03_13735 PF07730 Histidine kinase F0T03_13735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_13740 PF07690 Major Facilitator Superfamily F0T03_13750 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_13755 PF00005 ABC transporter F0T03_13755 PF08402 TOBE domain F0T03_13765 PF00072 Response regulator receiver domain F0T03_13765 PF00196 Bacterial regulatory proteins, luxR family F0T03_13770 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_13770 PF00072 Response regulator receiver domain F0T03_13770 PF00989 PAS fold F0T03_13770 PF01627 Hpt domain F0T03_13770 PF00512 His Kinase A (phospho-acceptor) domain F0T03_13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_13780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F0T03_13780 PF02753 Pili assembly chaperone PapD, C-terminal domain F0T03_13785 PF13954 PapC N-terminal domain F0T03_13785 PF13953 PapC C-terminal domain F0T03_13785 PF00577 Outer membrane usher protein F0T03_13795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F0T03_13795 PF02753 Pili assembly chaperone PapD, C-terminal domain F0T03_13805 PF00106 short chain dehydrogenase F0T03_13815 PF03797 Autotransporter beta-domain F0T03_13820 PF01584 CheW-like domain F0T03_13820 PF00072 Response regulator receiver domain F0T03_13825 PF08220 DeoR-like helix-turn-helix domain F0T03_13825 PF00455 DeoR C terminal sensor domain F0T03_13835 PF00977 Histidine biosynthesis protein F0T03_13845 PF01554 MatE F0T03_13850 PF00764 Arginosuccinate synthase F0T03_13855 PF02277 Phosphoribosyltransferase F0T03_13860 PF00300 Histidine phosphatase superfamily (branch 1) F0T03_13865 PF02654 Cobalamin-5-phosphate synthase F0T03_13870 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase F0T03_13875 PF07685 CobB/CobQ-like glutamine amidotransferase domain F0T03_13880 PF00005 ABC transporter F0T03_13885 PF02361 Cobalt transport protein F0T03_13890 PF02553 Cobalt transport protein component CbiN F0T03_13895 PF01891 Cobalt uptake substrate-specific transmembrane region F0T03_13900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0T03_13905 PF06180 Cobalt chelatase (CbiK) F0T03_13910 PF02571 Precorrin-6x reductase CbiJ/CobK F0T03_13915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0T03_13920 PF11761 Cobalamin biosynthesis central region F0T03_13920 PF01890 Cobalamin synthesis G C-terminus F0T03_13920 PF11760 Cobalamin synthesis G N-terminal F0T03_13925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0T03_13930 PF05175 Methyltransferase small domain F0T03_13935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0T03_13940 PF01888 CbiD F0T03_13945 PF02570 Precorrin-8X methylmutase F0T03_13950 PF03186 CobD/Cbib protein F0T03_13955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F0T03_13955 PF07685 CobB/CobQ-like glutamine amidotransferase domain F0T03_13960 PF12833 Helix-turn-helix domain F0T03_13960 PF10114 Sensory domain found in PocR F0T03_13965 PF00230 Major intrinsic protein F0T03_13970 PF00936 BMC domain F0T03_13975 PF00936 BMC domain F0T03_13980 PF02286 Dehydratase large subunit F0T03_13985 PF02288 Dehydratase medium subunit F0T03_13990 PF02287 Dehydratase small subunit F0T03_13995 PF18427 DD-reactivating factor swiveling domain F0T03_13995 PF08841 Diol dehydratase reactivase ATPase-like domain F0T03_14005 PF00936 BMC domain F0T03_14015 PF06130 Phosphate propanoyltransferase F0T03_14025 PF03319 Ethanolamine utilisation protein EutN/carboxysome F0T03_14030 PF01923 Cobalamin adenosyltransferase F0T03_14035 PF00171 Aldehyde dehydrogenase family F0T03_14040 PF00465 Iron-containing alcohol dehydrogenase F0T03_14045 PF10531 SLBB domain F0T03_14045 PF13237 4Fe-4S dicluster domain F0T03_14045 PF13375 RnfC Barrel sandwich hybrid domain F0T03_14045 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F0T03_14055 PF00936 BMC domain F0T03_14060 PF10662 Ethanolamine utilisation - propanediol utilisation F0T03_14065 PF00871 Acetokinase family F0T03_14070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0T03_14070 PF14824 Sirohaem biosynthesis protein central F0T03_14070 PF10414 Sirohaem synthase dimerisation region F0T03_14075 PF00155 Aminotransferase class I and II F0T03_14080 PF00288 GHMP kinases N terminal domain F0T03_14090 PF13407 Periplasmic binding protein domain F0T03_14100 PF02653 Branched-chain amino acid transport system / permease component F0T03_14105 PF02653 Branched-chain amino acid transport system / permease component F0T03_14110 PF04363 Protein of unknown function (DUF496) F0T03_14115 PF04632 Fusaric acid resistance protein family F0T03_14120 PF00550 Phosphopantetheine attachment site F0T03_14120 PF00501 AMP-binding enzyme F0T03_14120 PF07993 Male sterility protein F0T03_14125 PF00929 Exonuclease F0T03_14125 PF08411 Exonuclease C-terminal F0T03_14130 PF13520 Amino acid permease F0T03_14140 PF00465 Iron-containing alcohol dehydrogenase F0T03_14145 PF00005 ABC transporter F0T03_14150 PF02653 Branched-chain amino acid transport system / permease component F0T03_14155 PF01370 NAD dependent epimerase/dehydratase family F0T03_14165 PF08029 HisG, C-terminal domain F0T03_14165 PF01634 ATP phosphoribosyltransferase F0T03_14170 PF00815 Histidinol dehydrogenase F0T03_14175 PF00155 Aminotransferase class I and II F0T03_14180 PF00475 Imidazoleglycerol-phosphate dehydratase F0T03_14185 PF00117 Glutamine amidotransferase class-I F0T03_14190 PF00977 Histidine biosynthesis protein F0T03_14195 PF00977 Histidine biosynthesis protein F0T03_14200 PF01502 Phosphoribosyl-AMP cyclohydrolase F0T03_14200 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase F0T03_14205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F0T03_14205 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F0T03_14215 PF00483 Nucleotidyl transferase F0T03_14220 PF00483 Nucleotidyl transferase F0T03_14225 PF00534 Glycosyl transferases group 1 F0T03_14225 PF13439 Glycosyltransferase Family 4 F0T03_14230 PF00534 Glycosyl transferases group 1 F0T03_14230 PF00862 Sucrose synthase F0T03_14235 PF16363 GDP-mannose 4,6 dehydratase F0T03_14240 PF16363 GDP-mannose 4,6 dehydratase F0T03_14260 PF05598 Transposase domain (DUF772) F0T03_14260 PF01609 Transposase DDE domain F0T03_14280 PF00483 Nucleotidyl transferase F0T03_14280 PF01050 Mannose-6-phosphate isomerase F0T03_14285 PF03471 Transporter associated domain F0T03_14285 PF03741 Integral membrane protein TerC family F0T03_14285 PF00571 CBS domain F0T03_14290 PF03606 C4-dicarboxylate anaerobic carrier F0T03_14295 PF05170 AsmA family F0T03_14300 PF00692 dUTPase F0T03_14305 PF00485 Phosphoribulokinase / Uridine kinase family F0T03_14310 PF10609 NUBPL iron-transfer P-loop NTPase F0T03_14315 PF01588 Putative tRNA binding domain F0T03_14315 PF09334 tRNA synthetases class I (M) F0T03_14335 PF07690 Major Facilitator Superfamily F0T03_14340 PF03788 LrgA family F0T03_14345 PF04172 LrgB-like family F0T03_14350 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region F0T03_14350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F0T03_14355 PF03949 Malic enzyme, NAD binding domain F0T03_14355 PF00390 Malic enzyme, N-terminal domain F0T03_14360 PF02698 DUF218 domain F0T03_14365 PF01455 HupF/HypC family F0T03_14370 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA F0T03_14375 PF12798 4Fe-4S binding domain F0T03_14375 PF00037 4Fe-4S binding domain F0T03_14380 PF00361 Proton-conducting membrane transporter F0T03_14385 PF00146 NADH dehydrogenase F0T03_14390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F0T03_14390 PF00361 Proton-conducting membrane transporter F0T03_14395 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F0T03_14400 PF00361 Proton-conducting membrane transporter F0T03_14400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F0T03_14405 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F0T03_14405 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F0T03_14405 PF00374 Nickel-dependent hydrogenase F0T03_14410 PF12838 4Fe-4S dicluster domain F0T03_14415 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F0T03_14420 PF07450 Formate hydrogenlyase maturation protein HycH F0T03_14425 PF01750 Hydrogenase maturation protease F0T03_14430 PF13247 4Fe-4S dicluster domain F0T03_14430 PF12800 4Fe-4S binding domain F0T03_14435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F0T03_14435 PF00384 Molybdopterin oxidoreductase F0T03_14435 PF01568 Molydopterin dinucleotide binding domain F0T03_14440 PF01590 GAF domain F0T03_14440 PF00158 Sigma-54 interaction domain F0T03_14445 PF01226 Formate/nitrite transporter F0T03_14450 PF02653 Branched-chain amino acid transport system / permease component F0T03_14455 PF00005 ABC transporter F0T03_14460 PF13407 Periplasmic binding protein domain F0T03_14465 PF00356 Bacterial regulatory proteins, lacI family F0T03_14470 PF04235 Protein of unknown function (DUF418) F0T03_14475 PF01227 GTP cyclohydrolase I F0T03_14480 PF06779 Uncharacterised MFS-type transporter YbfB F0T03_14485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_14485 PF03466 LysR substrate binding domain F0T03_14490 PF00107 Zinc-binding dehydrogenase F0T03_14490 PF08240 Alcohol dehydrogenase GroES-like domain F0T03_14495 PF00756 Putative esterase F0T03_14515 PF02687 FtsX-like permease family F0T03_14515 PF12704 MacB-like periplasmic core domain F0T03_14515 PF00005 ABC transporter F0T03_14525 PF00083 Sugar (and other) transporter F0T03_14535 PF04606 Ogr/Delta-like zinc finger F0T03_14575 PF02413 Caudovirales tail fibre assembly protein, lambda gpK F0T03_14580 PF07484 Phage Tail Collar Domain F0T03_14680 PF05840 Bacteriophage replication gene A protein (GPA) F0T03_14715 PF06892 Phage regulatory protein CII (CP76) F0T03_14725 PF16452 Bacteriophage CI repressor C-terminal domain F0T03_14725 PF07022 Bacteriophage CI repressor helix-turn-helix domain F0T03_14730 PF02899 Phage integrase, N-terminal SAM-like domain F0T03_14730 PF00589 Phage integrase family F0T03_14740 PF00994 Probable molybdopterin binding domain F0T03_14740 PF03453 MoeA N-terminal region (domain I and II) F0T03_14740 PF03454 MoeA C-terminal region (domain IV) F0T03_14745 PF00899 ThiF family F0T03_14750 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading F0T03_14750 PF18416 N-acetylglucosamine binding protein domain 2 F0T03_14755 PF00005 ABC transporter F0T03_14755 PF12848 ABC transporter F0T03_14775 PF13505 Outer membrane protein beta-barrel domain F0T03_14785 PF00892 EamA-like transporter family F0T03_14795 PF02469 Fasciclin domain F0T03_14810 PF13847 Methyltransferase domain F0T03_14815 PF00210 Ferritin-like domain F0T03_14820 PF01258 Prokaryotic dksA/traR C4-type zinc finger F0T03_14825 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_14830 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_14835 PF00005 ABC transporter F0T03_14845 PF05971 RNA methyltransferase F0T03_14850 PF07338 Protein of unknown function (DUF1471) F0T03_14860 PF02885 Glycosyl transferase family, helical bundle domain F0T03_14865 PF00230 Major intrinsic protein F0T03_14870 PF06733 DEAD_2 F0T03_14870 PF13307 Helicase C-terminal domain F0T03_14875 PF00267 Gram-negative porin F0T03_14885 PF00892 EamA-like transporter family F0T03_14900 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_14905 PF00005 ABC transporter F0T03_14910 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_14915 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F0T03_14925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F0T03_14925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F0T03_14930 PF00581 Rhodanese-like domain F0T03_14935 PF00005 ABC transporter F0T03_14940 PF12399 Branched-chain amino acid ATP-binding cassette transporter F0T03_14940 PF00005 ABC transporter F0T03_14945 PF02653 Branched-chain amino acid transport system / permease component F0T03_14950 PF02653 Branched-chain amino acid transport system / permease component F0T03_14955 PF13458 Periplasmic binding protein F0T03_14960 PF07308 Protein of unknown function (DUF1456) F0T03_14965 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_14970 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_14980 PF00005 ABC transporter F0T03_14985 PF04226 Transglycosylase associated protein F0T03_14995 PF01844 HNH endonuclease F0T03_15000 PF01928 CYTH domain F0T03_15005 PF09330 D-lactate dehydrogenase, membrane binding F0T03_15005 PF01565 FAD binding domain F0T03_15010 PF00768 D-alanyl-D-alanine carboxypeptidase F0T03_15020 PF00571 CBS domain F0T03_15020 PF01769 Divalent cation transporter F0T03_15020 PF03448 MgtE intracellular N domain F0T03_15030 PF01207 Dihydrouridine synthase (Dus) F0T03_15035 PF00270 DEAD/DEAH box helicase F0T03_15035 PF00271 Helicase conserved C-terminal domain F0T03_15040 PF09209 Tetracyclin repressor-like, C-terminal domain F0T03_15040 PF00440 Bacterial regulatory proteins, tetR family F0T03_15045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_15050 PF00005 ABC transporter F0T03_15065 PF01027 Inhibitor of apoptosis-promoting Bax1 F0T03_15070 PF02391 MoaE protein F0T03_15075 PF02597 ThiS family F0T03_15080 PF01967 MoaC family F0T03_15085 PF04055 Radical SAM superfamily F0T03_15085 PF06463 Molybdenum Cofactor Synthesis C F0T03_15090 PF01933 Uncharacterised protein family UPF0052 F0T03_15095 PF09905 DNA-binding protein VF530 F0T03_15100 PF17757 UvrB interaction domain F0T03_15100 PF00271 Helicase conserved C-terminal domain F0T03_15100 PF02151 UvrB/uvrC motif F0T03_15100 PF12344 Ultra-violet resistance protein B F0T03_15100 PF04851 Type III restriction enzyme, res subunit F0T03_15105 PF00005 ABC transporter F0T03_15115 PF08241 Methyltransferase domain F0T03_15120 PF00155 Aminotransferase class I and II F0T03_15125 PF06968 Biotin and Thiamin Synthesis associated domain F0T03_15125 PF04055 Radical SAM superfamily F0T03_15130 PF00202 Aminotransferase class-III F0T03_15135 PF10282 Lactonase, 7-bladed beta-propeller F0T03_15145 PF03459 TOBE domain F0T03_15145 PF00005 ABC transporter F0T03_15150 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_15160 PF10766 Multidrug efflux pump-associated protein AcrZ F0T03_15165 PF03459 TOBE domain F0T03_15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_15170 PF00005 ABC transporter F0T03_15180 PF16363 GDP-mannose 4,6 dehydratase F0T03_15185 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain F0T03_15185 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain F0T03_15190 PF10509 Galactokinase galactose-binding signature F0T03_15190 PF08544 GHMP kinases C terminal F0T03_15190 PF00288 GHMP kinases N terminal domain F0T03_15195 PF01263 Aldose 1-epimerase F0T03_15205 PF00082 Subtilase family F0T03_15215 PF01223 DNA/RNA non-specific endonuclease F0T03_15220 PF00300 Histidine phosphatase superfamily (branch 1) F0T03_15225 PF00793 DAHP synthetase I family F0T03_15230 PF01545 Cation efflux family F0T03_15235 PF04973 Nicotinamide mononucleotide transporter F0T03_15240 PF02445 Quinolinate synthetase A protein F0T03_15265 PF16331 TolA binding protein trimerisation F0T03_15265 PF13174 Tetratricopeptide repeat F0T03_15270 PF00691 OmpA family F0T03_15275 PF07676 WD40-like Beta Propeller Repeat F0T03_15275 PF04052 TolB amino-terminal domain F0T03_15280 PF06519 TolA C-terminal F0T03_15280 PF06519 TolA C-terminal F0T03_15285 PF02472 Biopolymer transport protein ExbD/TolR F0T03_15290 PF01618 MotA/TolQ/ExbB proton channel family F0T03_15295 PF03061 Thioesterase superfamily F0T03_15300 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) F0T03_15305 PF08173 Membrane bound YbgT-like protein F0T03_15310 PF02322 Cytochrome bd terminal oxidase subunit II F0T03_15315 PF01654 Cytochrome bd terminal oxidase subunit I F0T03_15320 PF02872 5'-nucleotidase, C-terminal domain F0T03_15320 PF00149 Calcineurin-like phosphoesterase F0T03_15330 PF02629 CoA binding domain F0T03_15330 PF00549 CoA-ligase F0T03_15335 PF08442 ATP-grasp domain F0T03_15335 PF00549 CoA-ligase F0T03_15340 PF02817 e3 binding domain F0T03_15340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F0T03_15340 PF00364 Biotin-requiring enzyme F0T03_15345 PF16870 2-oxoglutarate dehydrogenase C-terminal F0T03_15345 PF16078 2-oxoglutarate dehydrogenase N-terminus F0T03_15345 PF02779 Transketolase, pyrimidine binding domain F0T03_15345 PF00676 Dehydrogenase E1 component F0T03_15350 PF13085 2Fe-2S iron-sulfur cluster binding domain F0T03_15355 PF00890 FAD binding domain F0T03_15355 PF02910 Fumarate reductase flavoprotein C-term F0T03_15360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F0T03_15365 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F0T03_15370 PF00285 Citrate synthase, C-terminal domain F0T03_15375 PF01470 Pyroglutamyl peptidase F0T03_15390 PF03746 LamB/YcsF family F0T03_15395 PF02626 Carboxyltransferase domain, subdomain A and B F0T03_15400 PF02682 Carboxyltransferase domain, subdomain C and D F0T03_15405 PF01784 NIF3 (NGG1p interacting factor 3) F0T03_15410 PF02112 cAMP phosphodiesterases class-II F0T03_15415 PF03441 FAD binding domain of DNA photolyase F0T03_15415 PF00875 DNA photolyase F0T03_15420 PF08349 Protein of unknown function (DUF1722) F0T03_15425 PF10725 Protein of unknown function (DUF2517) F0T03_15430 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) F0T03_15435 PF03814 Potassium-transporting ATPase A subunit F0T03_15445 PF02669 K+-transporting ATPase, c chain F0T03_15450 PF13493 Domain of unknown function (DUF4118) F0T03_15450 PF13492 GAF domain F0T03_15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_15450 PF00512 His Kinase A (phospho-acceptor) domain F0T03_15450 PF02702 Osmosensitive K+ channel His kinase sensor domain F0T03_15455 PF00486 Transcriptional regulatory protein, C terminal F0T03_15455 PF00072 Response regulator receiver domain F0T03_15470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F0T03_15470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F0T03_15470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F0T03_15470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F0T03_15475 PF17206 SeqA protein N-terminal domain F0T03_15475 PF03925 SeqA protein C-terminal domain F0T03_15480 PF12697 Alpha/beta hydrolase family F0T03_15485 PF01402 Ribbon-helix-helix protein, copG family F0T03_15490 PF00672 HAMP domain F0T03_15490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_15490 PF02203 Tar ligand binding domain homologue F0T03_15495 PF00258 Flavodoxin F0T03_15500 PF01475 Ferric uptake regulator family F0T03_15505 PF00728 Glycosyl hydrolase family 20, catalytic domain F0T03_15505 PF02838 Glycosyl hydrolase family 20, domain 2 F0T03_15505 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain F0T03_15505 PF03173 Putative carbohydrate binding domain F0T03_15510 PF13982 YbfN-like lipoprotein F0T03_15515 PF03573 outer membrane porin, OprD family F0T03_15520 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain F0T03_15520 PF00749 tRNA synthetases class I (E and Q), catalytic domain F0T03_15525 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F0T03_15525 PF02378 Phosphotransferase system, EIIC F0T03_15525 PF00367 phosphotransferase system, EIIB F0T03_15530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F0T03_15535 PF01979 Amidohydrolase family F0T03_15540 PF01047 MarR family F0T03_15540 PF00480 ROK family F0T03_15545 PF13344 Haloacid dehalogenase-like hydrolase F0T03_15550 PF00733 Asparagine synthase F0T03_15550 PF13537 Glutamine amidotransferase domain F0T03_15585 PF01494 FAD binding domain F0T03_15590 PF00919 Uncharacterized protein family UPF0004 F0T03_15590 PF01938 TRAM domain F0T03_15590 PF04055 Radical SAM superfamily F0T03_15595 PF02562 PhoH-like protein F0T03_15600 PF02130 Uncharacterized protein family UPF0054 F0T03_15605 PF03471 Transporter associated domain F0T03_15605 PF00571 CBS domain F0T03_15610 PF00795 Carbon-nitrogen hydrolase F0T03_15620 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_15625 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_15630 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_15635 PF00005 ABC transporter F0T03_15640 PF01156 Inosine-uridine preferring nucleoside hydrolase F0T03_15645 PF07295 Zinc-ribbon containing domain F0T03_15650 PF00133 tRNA synthetases class I (I, L, M and V) F0T03_15650 PF13603 Leucyl-tRNA synthetase, Domain 2 F0T03_15650 PF08264 Anticodon-binding domain of tRNA F0T03_15655 PF04390 Lipopolysaccharide-assembly F0T03_15660 PF14840 Processivity clamp loader gamma complex DNA pol III C-term F0T03_15660 PF06144 DNA polymerase III, delta subunit F0T03_15665 PF01467 Cytidylyltransferase-like F0T03_15675 PF02590 Predicted SPOUT methyltransferase F0T03_15680 PF03717 Penicillin-binding Protein dimerisation domain F0T03_15680 PF00905 Penicillin binding protein transpeptidase domain F0T03_15685 PF01098 Cell cycle protein F0T03_15690 PF05036 Sporulation related domain F0T03_15690 PF03330 Lytic transglycolase F0T03_15695 PF07943 Penicillin-binding protein 5, C-terminal domain F0T03_15695 PF00768 D-alanyl-D-alanine carboxypeptidase F0T03_15700 PF04359 Protein of unknown function (DUF493) F0T03_15705 PF03099 Biotin/lipoate A/B protein ligase family F0T03_15710 PF04055 Radical SAM superfamily F0T03_15710 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family F0T03_15715 PF02416 mttA/Hcf106 family F0T03_15720 PF05230 MASE2 domain F0T03_15720 PF00990 Diguanylate cyclase, GGDEF domain F0T03_15725 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F0T03_15730 PF00313 'Cold-shock' DNA-binding domain F0T03_15735 PF00313 'Cold-shock' DNA-binding domain F0T03_15740 PF00196 Bacterial regulatory proteins, luxR family F0T03_15750 PF00149 Calcineurin-like phosphoesterase F0T03_15765 PF00664 ABC transporter transmembrane region F0T03_15765 PF00005 ABC transporter F0T03_15770 PF08007 Cupin superfamily protein F0T03_15780 PF01740 STAS domain F0T03_15780 PF00916 Sulfate permease family F0T03_15790 PF13302 Acetyltransferase (GNAT) domain F0T03_15805 PF02558 Ketopantoate reductase PanE/ApbA F0T03_15805 PF08546 Ketopantoate reductase PanE/ApbA C terminal F0T03_15825 PF00665 Integrase core domain F0T03_15825 PF13333 Integrase core domain F0T03_15825 PF13276 HTH-like domain F0T03_15830 PF01797 Transposase IS200 like F0T03_15850 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F0T03_15850 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F0T03_15860 PF09190 DALR domain F0T03_15860 PF01406 tRNA synthetases class I (C) catalytic domain F0T03_15865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F0T03_15870 PF00149 Calcineurin-like phosphoesterase F0T03_15875 PF00731 AIR carboxylase F0T03_15880 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F0T03_15880 PF02222 ATP-grasp domain F0T03_15890 PF00005 ABC transporter F0T03_15895 PF13472 GDSL-like Lipase/Acylhydrolase family F0T03_15900 PF00106 short chain dehydrogenase F0T03_15905 PF00085 Thioredoxin F0T03_15910 PF16200 C-terminal region of band_7 F0T03_15910 PF01145 SPFH domain / Band 7 family F0T03_15915 PF01957 NfeD-like C-terminal, partner-binding F0T03_15920 PF13411 MerR HTH family regulatory protein F0T03_15925 PF00403 Heavy-metal-associated domain F0T03_15930 PF01963 TraB family F0T03_15935 PF04073 Aminoacyl-tRNA editing domain F0T03_15975 PF06530 Phage antitermination protein Q F0T03_15985 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain F0T03_15985 PF00589 Phage integrase family F0T03_15990 PF00149 Calcineurin-like phosphoesterase F0T03_15990 PF02872 5'-nucleotidase, C-terminal domain F0T03_15995 PF07690 Major Facilitator Superfamily F0T03_16005 PF00999 Sodium/hydrogen exchanger family F0T03_16005 PF02254 TrkA-N domain F0T03_16010 PF00294 pfkB family carbohydrate kinase F0T03_16015 PF16363 GDP-mannose 4,6 dehydratase F0T03_16020 PF00534 Glycosyl transferases group 1 F0T03_16020 PF13439 Glycosyltransferase Family 4 F0T03_16025 PF02719 Polysaccharide biosynthesis protein F0T03_16030 PF00953 Glycosyl transferase family 4 F0T03_16040 PF13439 Glycosyltransferase Family 4 F0T03_16040 PF00534 Glycosyl transferases group 1 F0T03_16045 PF00535 Glycosyl transferase family 2 F0T03_16050 PF01501 Glycosyl transferase family 8 F0T03_16050 PF00535 Glycosyl transferase family 2 F0T03_16055 PF01943 Polysaccharide biosynthesis protein F0T03_16060 PF00762 Ferrochelatase F0T03_16065 PF05191 Adenylate kinase, active site lid F0T03_16070 PF00183 Hsp90 protein F0T03_16070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_16075 PF13662 Toprim domain F0T03_16075 PF02132 RecR protein F0T03_16080 PF02575 YbaB/EbfC DNA-binding family F0T03_16085 PF12170 DNA polymerase III tau subunit V interacting with alpha F0T03_16085 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding F0T03_16085 PF12169 DNA polymerase III subunits gamma and tau domain III F0T03_16090 PF00156 Phosphoribosyl transferase domain F0T03_16095 PF04304 Protein of unknown function (DUF454) F0T03_16105 PF10689 Protein of unknown function (DUF2496) F0T03_16110 PF00924 Mechanosensitive ion channel F0T03_16110 PF12795 Mechanosensitive ion channel porin domain F0T03_16110 PF12794 Mechanosensitive ion channel inner membrane domain 1 F0T03_16115 PF02635 DsrE/DsrF-like family F0T03_16120 PF00440 Bacterial regulatory proteins, tetR family F0T03_16120 PF08361 MAATS-type transcriptional repressor, C-terminal region F0T03_16125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_16125 PF00529 HlyD membrane-fusion protein of T1SS F0T03_16130 PF00873 AcrB/AcrD/AcrF family F0T03_16140 PF01168 Alanine racemase, N-terminal domain F0T03_16145 PF01676 Metalloenzyme superfamily F0T03_16150 PF01197 Ribosomal protein L31 F0T03_16155 PF00444 Ribosomal protein L36 F0T03_16160 PF01297 Zinc-uptake complex component A periplasmic F0T03_16165 PF00950 ABC 3 transport family F0T03_16170 PF00005 ABC transporter F0T03_16180 PF10757 Biofilm formation regulator YbaJ F0T03_16185 PF05321 Haemolysin expression modulating protein F0T03_16195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F0T03_16200 PF09619 Type III secretion system lipoprotein chaperone (YscW) F0T03_16210 PF00909 Ammonium Transporter Family F0T03_16215 PF00543 Nitrogen regulatory protein P-II F0T03_16220 PF00005 ABC transporter F0T03_16220 PF00664 ABC transporter transmembrane region F0T03_16225 PF00005 ABC transporter F0T03_16225 PF00664 ABC transporter transmembrane region F0T03_16230 PF01037 Lrp/AsnC ligand binding domain F0T03_16230 PF13404 AsnC-type helix-turn-helix domain F0T03_16235 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_16245 PF12793 Sugar transport-related sRNA regulator N-term F0T03_16245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_16250 PF06508 Queuosine biosynthesis protein QueC F0T03_16265 PF13145 PPIC-type PPIASE domain F0T03_16270 PF00216 Bacterial DNA-binding protein F0T03_16275 PF00004 ATPase family associated with various cellular activities (AAA) F0T03_16275 PF05362 Lon protease (S16) C-terminal proteolytic domain F0T03_16275 PF02190 ATP-dependent protease La (LON) substrate-binding domain F0T03_16280 PF07724 AAA domain (Cdc48 subfamily) F0T03_16280 PF06689 ClpX C4-type zinc finger F0T03_16280 PF10431 C-terminal, D2-small domain, of ClpB protein F0T03_16285 PF00574 Clp protease F0T03_16290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0T03_16290 PF05697 Bacterial trigger factor protein (TF) F0T03_16290 PF05698 Bacterial trigger factor protein (TF) C-terminus F0T03_16300 PF01722 BolA-like protein F0T03_16305 PF08139 Prokaryotic membrane lipoprotein lipid attachment site F0T03_16305 PF03923 Uncharacterized lipoprotein F0T03_16310 PF07690 Major Facilitator Superfamily F0T03_16315 PF03502 Nucleoside-specific channel-forming protein, Tsx F0T03_16320 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F0T03_16320 PF06481 COX Aromatic Rich Motif F0T03_16325 PF00115 Cytochrome C and Quinol oxidase polypeptide I F0T03_16330 PF00510 Cytochrome c oxidase subunit III F0T03_16335 PF03626 Prokaryotic Cytochrome C oxidase subunit IV F0T03_16340 PF01040 UbiA prenyltransferase family F0T03_16345 PF07690 Major Facilitator Superfamily F0T03_16350 PF04461 Protein of unknown function (DUF520) F0T03_16355 PF02558 Ketopantoate reductase PanE/ApbA F0T03_16355 PF08546 Ketopantoate reductase PanE/ApbA C terminal F0T03_16360 PF01965 DJ-1/PfpI family F0T03_16365 PF02568 Thiamine biosynthesis protein (ThiI) F0T03_16365 PF02926 THUMP domain F0T03_16370 PF02609 Exonuclease VII small subunit F0T03_16375 PF00348 Polyprenyl synthetase F0T03_16380 PF02779 Transketolase, pyrimidine binding domain F0T03_16380 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F0T03_16380 PF02780 Transketolase, C-terminal domain F0T03_16385 PF04608 Phosphatidylglycerophosphatase A F0T03_16390 PF02769 AIR synthase related protein, C-terminal domain F0T03_16390 PF00586 AIR synthase related protein, N-terminal domain F0T03_16395 PF01029 NusB family F0T03_16400 PF00885 6,7-dimethyl-8-ribityllumazine synthase F0T03_16405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F0T03_16405 PF01872 RibD C-terminal domain F0T03_16410 PF03477 ATP cone domain F0T03_16420 PF07549 SecD/SecF GG Motif F0T03_16420 PF02355 Protein export membrane protein F0T03_16425 PF13721 SecD export protein N-terminal TM region F0T03_16425 PF07549 SecD/SecF GG Motif F0T03_16425 PF02355 Protein export membrane protein F0T03_16430 PF02699 Preprotein translocase subunit F0T03_16435 PF01702 Queuine tRNA-ribosyltransferase F0T03_16445 PF02547 Queuosine biosynthesis protein F0T03_16450 PF04336 Acyl carrier protein phosphodiesterase F0T03_16455 PF10417 C-terminal domain of 1-Cys peroxiredoxin F0T03_16455 PF00578 AhpC/TSA family F0T03_16470 PF00128 Alpha amylase, catalytic domain F0T03_16470 PF02903 Alpha amylase, N-terminal ig-like domain F0T03_16475 PF00324 Amino acid permease F0T03_16480 PF05525 Branched-chain amino acid transport protein F0T03_16485 PF12849 PBP superfamily domain F0T03_16490 PF00989 PAS fold F0T03_16490 PF11808 Phosphate regulon sensor protein PhoR F0T03_16490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_16490 PF00512 His Kinase A (phospho-acceptor) domain F0T03_16495 PF00486 Transcriptional regulatory protein, C terminal F0T03_16495 PF00072 Response regulator receiver domain F0T03_16500 PF00149 Calcineurin-like phosphoesterase F0T03_16500 PF12320 Type 5 capsule protein repressor C-terminal domain F0T03_16505 PF13476 AAA domain F0T03_16510 PF00480 ROK family F0T03_16515 PF04381 Putative exonuclease, RdgC F0T03_16520 PF06865 Pyrimidine/purine nucleoside phosphorylase F0T03_16525 PF01202 Shikimate kinase F0T03_16530 PF00593 TonB dependent receptor F0T03_16530 PF07715 TonB-dependent Receptor Plug Domain F0T03_16535 PF01497 Periplasmic binding protein F0T03_16550 PF08241 Methyltransferase domain F0T03_16565 PF06165 Glycosyltransferase family 36 F0T03_16565 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain F0T03_16565 PF10091 Putative glucoamylase F0T03_16570 PF07238 PilZ domain F0T03_16570 PF07317 Flagellar regulator YcgR F0T03_16575 PF11975 Family 4 glycosyl hydrolase C-terminal domain F0T03_16575 PF02056 Family 4 glycosyl hydrolase F0T03_16580 PF00367 phosphotransferase system, EIIB F0T03_16580 PF02378 Phosphotransferase system, EIIC F0T03_16585 PF07702 UTRA domain F0T03_16585 PF00392 Bacterial regulatory proteins, gntR family F0T03_16590 PF01773 Na+ dependent nucleoside transporter N-terminus F0T03_16590 PF07662 Na+ dependent nucleoside transporter C-terminus F0T03_16595 PF04227 Indigoidine synthase A like protein F0T03_16600 PF00294 pfkB family carbohydrate kinase F0T03_16605 PF00171 Aldehyde dehydrogenase family F0T03_16610 PF00696 Amino acid kinase family F0T03_16610 PF01472 PUA domain F0T03_16615 PF07417 Sigma factor-binding transcriptional regulator Crl F0T03_16625 PF00156 Phosphoribosyl transferase domain F0T03_16630 PF07687 Peptidase dimerisation domain F0T03_16630 PF01546 Peptidase family M20/M25/M40 F0T03_16635 PF00817 impB/mucB/samB family F0T03_16635 PF11798 IMS family HHH motif F0T03_16635 PF11799 impB/mucB/samB family C-terminal domain F0T03_16645 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_16650 PF13309 HTH domain F0T03_16650 PF08348 YheO-like PAS domain F0T03_16655 PF07478 D-ala D-ala ligase C-terminus F0T03_16655 PF01820 D-ala D-ala ligase N-terminus F0T03_16660 PF03009 Glycerophosphoryl diester phosphodiesterase family F0T03_16665 PF04400 (Na+)-NQR maturation NqrM F0T03_16670 PF02424 ApbE family F0T03_16675 PF00175 Oxidoreductase NAD-binding domain F0T03_16675 PF00111 2Fe-2S iron-sulfur cluster binding domain F0T03_16675 PF00970 Oxidoreductase FAD-binding domain F0T03_16680 PF02508 Rnf-Nqr subunit, membrane protein F0T03_16685 PF02508 Rnf-Nqr subunit, membrane protein F0T03_16690 PF04205 FMN-binding domain F0T03_16695 PF03116 NQR2, RnfD, RnfE family F0T03_16700 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) F0T03_16700 PF11973 NQRA C-terminal domain F0T03_16705 PF03734 L,D-transpeptidase catalytic domain F0T03_16710 PF13230 Glutamine amidotransferases class-II F0T03_16715 PF13580 SIS domain F0T03_16720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F0T03_16720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F0T03_16720 PF09317 Domain of unknown function (DUF1974) F0T03_16725 PF18254 HMW1 domain 2 F0T03_16725 PF18071 HMW1C N-terminal F0T03_16730 PF05860 haemagglutination activity domain F0T03_16735 PF08479 POTRA domain, ShlB-type F0T03_16735 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB F0T03_16740 PF01636 Phosphotransferase enzyme family F0T03_16745 PF01008 Initiation factor 2 subunit family F0T03_16750 PF03079 ARD/ARD' family F0T03_16760 PF00596 Class II Aldolase and Adducin N-terminal domain F0T03_16765 PF00155 Aminotransferase class I and II F0T03_16770 PF00795 Carbon-nitrogen hydrolase F0T03_16775 PF00266 Aminotransferase class-V F0T03_16780 PF03466 LysR substrate binding domain F0T03_16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_16785 PF07690 Major Facilitator Superfamily F0T03_16790 PF03591 AzlC protein F0T03_16795 PF05437 Branched-chain amino acid transport protein (AzlD) F0T03_16800 PF01047 MarR family F0T03_16805 PF02321 Outer membrane efflux protein F0T03_16810 PF00529 HlyD membrane-fusion protein of T1SS F0T03_16810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_16815 PF07690 Major Facilitator Superfamily F0T03_16820 PF00588 SpoU rRNA Methylase family F0T03_16820 PF08032 RNA 2'-O ribose methyltransferase substrate binding F0T03_16825 PF00085 Thioredoxin F0T03_16835 PF13607 Succinyl-CoA ligase like flavodoxin domain F0T03_16835 PF00583 Acetyltransferase (GNAT) family F0T03_16835 PF13380 CoA binding domain F0T03_16840 PF13091 PLD-like domain F0T03_16845 PF10043 Predicted periplasmic lipoprotein (DUF2279) F0T03_16885 PF00005 ABC transporter F0T03_16885 PF09383 NIL domain F0T03_16890 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_16895 PF03180 NLPA lipoprotein F0T03_16900 PF16358 RcsF lipoprotein F0T03_16905 PF01980 tRNA-methyltransferase O F0T03_16905 PF18389 TrmO C-terminal domain F0T03_16910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F0T03_16910 PF03129 Anticodon binding domain F0T03_16910 PF04073 Aminoacyl-tRNA editing domain F0T03_16915 PF17185 NlpE C-terminal OB domain F0T03_16915 PF04170 NlpE N-terminal domain F0T03_16920 PF00472 RF-1 domain F0T03_16925 PF07152 YaeQ protein F0T03_16930 PF06786 Uncharacterised protein family (UPF0253) F0T03_16935 PF07073 Modulator of Rho-dependent transcription termination (ROF) F0T03_16940 PF00034 Cytochrome c F0T03_16945 PF11734 TilS substrate C-terminal domain F0T03_16945 PF09179 TilS substrate binding domain F0T03_16945 PF01171 PP-loop family F0T03_16950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F0T03_16960 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F0T03_16965 PF01336 OB-fold nucleic acid binding domain F0T03_16965 PF14579 Helix-hairpin-helix motif F0T03_16965 PF02811 PHP domain F0T03_16965 PF07733 Bacterial DNA polymerase III alpha NTPase domain F0T03_16965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F0T03_16970 PF01351 Ribonuclease HII F0T03_16975 PF02684 Lipid-A-disaccharide synthetase F0T03_16980 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 F0T03_16980 PF00132 Bacterial transferase hexapeptide (six repeats) F0T03_16985 PF07977 FabA-like domain F0T03_16990 PF00132 Bacterial transferase hexapeptide (six repeats) F0T03_16990 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD F0T03_16995 PF03938 Outer membrane protein (OmpH-like) F0T03_17000 PF01103 Surface antigen F0T03_17000 PF07244 Surface antigen variable number repeat F0T03_17005 PF17820 PDZ domain F0T03_17005 PF02163 Peptidase family M50 F0T03_17015 PF01255 Putative undecaprenyl diphosphate synthase F0T03_17020 PF13288 DXP reductoisomerase C-terminal domain F0T03_17020 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F0T03_17020 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F0T03_17025 PF01765 Ribosome recycling factor F0T03_17030 PF00696 Amino acid kinase family F0T03_17035 PF00889 Elongation factor TS F0T03_17040 PF00318 Ribosomal protein S2 F0T03_17050 PF00557 Metallopeptidase family M24 F0T03_17055 PF01842 ACT domain F0T03_17055 PF01966 HD domain F0T03_17055 PF01909 Nucleotidyltransferase domain F0T03_17055 PF08335 GlnD PII-uridylyltransferase F0T03_17060 PF14602 Hexapeptide repeat of succinyl-transferase F0T03_17060 PF00132 Bacterial transferase hexapeptide (six repeats) F0T03_17060 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal F0T03_17065 PF11944 Protein of unknown function (DUF3461) F0T03_17070 PF00258 Flavodoxin F0T03_17075 PF00849 RNA pseudouridylate synthase F0T03_17080 PF04287 tRNA pseudouridine synthase C F0T03_17085 PF07348 Syd protein (SUKH-2) F0T03_17090 PF14489 QueF-like protein F0T03_17090 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term F0T03_17095 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases F0T03_17095 PF03641 Possible lysine decarboxylase F0T03_17095 PF11892 Domain of unknown function (DUF3412) F0T03_17100 PF01367 5'-3' exonuclease, C-terminal SAM fold F0T03_17100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F0T03_17105 PF18125 RlmM ferredoxin-like domain F0T03_17105 PF01728 FtsJ-like methyltransferase F0T03_17110 PF04241 Protein of unknown function (DUF423) F0T03_17115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_17115 PF03466 LysR substrate binding domain F0T03_17120 PF06004 Bacterial protein of unknown function (DUF903) F0T03_17125 PF00266 Aminotransferase class-V F0T03_17130 PF02657 Fe-S metabolism associated domain F0T03_17135 PF00899 ThiF family F0T03_17140 PF06725 3D domain F0T03_17140 PF03562 MltA specific insert domain F0T03_17160 PF01520 N-acetylmuramoyl-L-alanine amidase F0T03_17160 PF11741 AMIN domain F0T03_17165 PF00696 Amino acid kinase family F0T03_17165 PF00583 Acetyltransferase (GNAT) family F0T03_17170 PF13538 UvrD-like helicase C-terminal domain F0T03_17175 PF12705 PD-(D/E)XK nuclease superfamily F0T03_17175 PF00580 UvrD/REP helicase N-terminal domain F0T03_17175 PF13361 UvrD-like helicase C-terminal domain F0T03_17180 PF00675 Insulinase (Peptidase family M16) F0T03_17180 PF05193 Peptidase M16 inactive domain F0T03_17180 PF16187 Middle or third domain of peptidase_M16 F0T03_17185 PF17946 RecC C-terminal domain F0T03_17205 PF00114 Pilin (bacterial filament) F0T03_17205 PF07963 Prokaryotic N-terminal methylation motif F0T03_17210 PF00303 Thymidylate synthase F0T03_17215 PF01790 Prolipoprotein diacylglyceryl transferase F0T03_17220 PF01590 GAF domain F0T03_17220 PF05524 PEP-utilising enzyme, N-terminal F0T03_17220 PF00391 PEP-utilising enzyme, mobile domain F0T03_17220 PF02896 PEP-utilising enzyme, TIM barrel domain F0T03_17225 PF00293 NUDIX domain F0T03_17235 PF02976 DNA mismatch repair enzyme MutH F0T03_17240 PF03741 Integral membrane protein TerC family F0T03_17245 PF00248 Aldo/keto reductase family F0T03_17250 PF07690 Major Facilitator Superfamily F0T03_17255 PF00501 AMP-binding enzyme F0T03_17255 PF13193 AMP-binding enzyme C-terminal domain F0T03_17255 PF01553 Acyltransferase F0T03_17260 PF01568 Molydopterin dinucleotide binding domain F0T03_17260 PF00384 Molybdopterin oxidoreductase F0T03_17265 PF00356 Bacterial regulatory proteins, lacI family F0T03_17270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F0T03_17270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F0T03_17275 PF03466 LysR substrate binding domain F0T03_17275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_17280 PF07690 Major Facilitator Superfamily F0T03_17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_17285 PF03466 LysR substrate binding domain F0T03_17300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_17300 PF00672 HAMP domain F0T03_17300 PF02203 Tar ligand binding domain homologue F0T03_17315 PF06750 Bacterial Peptidase A24 N-terminal domain F0T03_17315 PF01478 Type IV leader peptidase family F0T03_17335 PF07963 Prokaryotic N-terminal methylation motif F0T03_17335 PF11612 Type II secretion system (T2SS), protein J F0T03_17340 PF07963 Prokaryotic N-terminal methylation motif F0T03_17340 PF02501 Type II secretion system (T2SS), protein I F0T03_17345 PF08334 Type II secretion system (T2SS), protein G F0T03_17345 PF07963 Prokaryotic N-terminal methylation motif F0T03_17350 PF00482 Type II secretion system (T2SS), protein F F0T03_17355 PF00437 Type II/IV secretion system protein F0T03_17360 PF00263 Bacterial type II and III secretion system protein F0T03_17360 PF03958 Bacterial type II/III secretion system short domain F0T03_17375 PF00484 Carbonic anhydrase F0T03_17380 PF01638 HxlR-like helix-turn-helix F0T03_17400 PF01556 DnaJ C terminal domain F0T03_17400 PF00226 DnaJ domain F0T03_17405 PF00356 Bacterial regulatory proteins, lacI family F0T03_17410 PF07690 Major Facilitator Superfamily F0T03_17415 PF16338 Domain of unknown function (DUF4968) F0T03_17415 PF01055 Glycosyl hydrolases family 31 F0T03_17415 PF13802 Galactose mutarotase-like F0T03_17415 PF17137 Domain of unknown function (DUF5110) F0T03_17425 PF01037 Lrp/AsnC ligand binding domain F0T03_17430 PF00990 Diguanylate cyclase, GGDEF domain F0T03_17430 PF08448 PAS fold F0T03_17435 PF03797 Autotransporter beta-domain F0T03_17450 PF01381 Helix-turn-helix F0T03_17470 PF00152 tRNA synthetases class II (D, K and N) F0T03_17470 PF01336 OB-fold nucleic acid binding domain F0T03_17480 PF02272 DHHA1 domain F0T03_17480 PF17768 RecJ OB domain F0T03_17480 PF01368 DHH family F0T03_17485 PF10411 Disulfide bond isomerase protein N-terminus F0T03_17485 PF13098 Thioredoxin-like domain F0T03_17490 PF00589 Phage integrase family F0T03_17490 PF02899 Phage integrase, N-terminal SAM-like domain F0T03_17495 PF00258 Flavodoxin F0T03_17500 PF06123 Inner membrane protein CreD F0T03_17505 PF00672 HAMP domain F0T03_17505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_17505 PF00512 His Kinase A (phospho-acceptor) domain F0T03_17510 PF00072 Response regulator receiver domain F0T03_17510 PF00486 Transcriptional regulatory protein, C terminal F0T03_17515 PF07254 Membrane-bound toxin component of toxin-antitoxin system F0T03_17520 PF03937 Flavinator of succinate dehydrogenase F0T03_17525 PF01571 Aminomethyltransferase folate-binding domain F0T03_17530 PF03006 Haemolysin-III related F0T03_17550 PF02347 Glycine cleavage system P-protein F0T03_17555 PF01597 Glycine cleavage H-protein F0T03_17560 PF01571 Aminomethyltransferase folate-binding domain F0T03_17560 PF08669 Glycine cleavage T-protein C-terminal barrel domain F0T03_17570 PF01494 FAD binding domain F0T03_17575 PF01494 FAD binding domain F0T03_17580 PF00557 Metallopeptidase family M24 F0T03_17580 PF05195 Aminopeptidase P, N-terminal domain F0T03_17585 PF03695 Uncharacterised protein family (UPF0149) F0T03_17590 PF05164 Cell division protein ZapA F0T03_17600 PF01812 5-formyltetrahydrofolate cyclo-ligase family F0T03_17605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F0T03_17605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0T03_17605 PF01842 ACT domain F0T03_17610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) F0T03_17615 PF03466 LysR substrate binding domain F0T03_17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_17620 PF04402 Protein of unknown function (DUF541) F0T03_17625 PF01810 LysE type translocator F0T03_17630 PF00924 Mechanosensitive ion channel F0T03_17630 PF05552 Conserved TM helix F0T03_17640 PF01116 Fructose-bisphosphate aldolase class-II F0T03_17645 PF00162 Phosphoglycerate kinase F0T03_17650 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F0T03_17650 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F0T03_17660 PF02780 Transketolase, C-terminal domain F0T03_17660 PF02779 Transketolase, pyrimidine binding domain F0T03_17660 PF00456 Transketolase, thiamine diphosphate binding domain F0T03_17665 PF01435 Peptidase family M48 F0T03_17670 PF00355 Rieske [2Fe-2S] domain F0T03_17675 PF17810 Arginine decarboxylase helical bundle domain F0T03_17675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F0T03_17675 PF17944 Arginine decarboxylase C-terminal helical extension F0T03_17680 PF00438 S-adenosylmethionine synthetase, N-terminal domain F0T03_17680 PF02773 S-adenosylmethionine synthetase, C-terminal domain F0T03_17680 PF02772 S-adenosylmethionine synthetase, central domain F0T03_17690 PF04143 Sulphur transport F0T03_17700 PF17283 SprT-like zinc ribbon domain F0T03_17700 PF10263 SprT-like family F0T03_17705 PF04231 Endonuclease I F0T03_17710 PF04452 RNA methyltransferase F0T03_17715 PF02951 Prokaryotic glutathione synthetase, N-terminal domain F0T03_17715 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain F0T03_17720 PF02622 Uncharacterized ACR, COG1678 F0T03_17725 PF03652 Holliday junction resolvase F0T03_17730 PF00795 Carbon-nitrogen hydrolase F0T03_17735 PF04371 Porphyromonas-type peptidyl-arginine deiminase F0T03_17740 PF00437 Type II/IV secretion system protein F0T03_17745 PF01168 Alanine racemase, N-terminal domain F0T03_17750 PF03807 NADP oxidoreductase coenzyme F420-dependent F0T03_17750 PF14748 Pyrroline-5-carboxylate reductase dimerisation F0T03_17755 PF02325 YGGT family F0T03_17760 PF02594 Uncharacterised ACR, YggU family COG1872 F0T03_17765 PF01725 Ham1 family F0T03_17770 PF04055 Radical SAM superfamily F0T03_17770 PF06969 HemN C-terminal domain F0T03_17775 PF11101 Protein of unknown function (DUF2884) F0T03_17780 PF04960 Glutaminase F0T03_17785 PF04320 Protein with unknown function (DUF469) F0T03_17790 PF02390 Putative methyltransferase F0T03_17795 PF10576 Iron-sulfur binding domain of endonuclease III F0T03_17795 PF00633 Helix-hairpin-helix motif F0T03_17795 PF00730 HhH-GPD superfamily base excision DNA repair protein F0T03_17795 PF14815 NUDIX domain F0T03_17800 PF04362 Bacterial Fe(2+) trafficking F0T03_17805 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain F0T03_17805 PF01464 Transglycosylase SLT domain F0T03_17815 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F0T03_17815 PF01276 Orn/Lys/Arg decarboxylase, major domain F0T03_17815 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F0T03_17830 PF02517 CPBP intramembrane metalloprotease F0T03_17970 PF10431 C-terminal, D2-small domain, of ClpB protein F0T03_17970 PF17871 AAA lid domain F0T03_17970 PF07724 AAA domain (Cdc48 subfamily) F0T03_17970 PF00004 ATPase family associated with various cellular activities (AAA) F0T03_17980 PF13488 Glycine zipper F0T03_17980 PF00691 OmpA family F0T03_18010 PF00550 Phosphopantetheine attachment site F0T03_18035 PF07720 Tetratricopeptide repeat F0T03_18040 PF01312 FlhB HrpN YscU SpaS Family F0T03_18045 PF01311 Bacterial export proteins, family 1 F0T03_18050 PF01313 Bacterial export proteins, family 3 F0T03_18055 PF00813 FliP family F0T03_18075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F0T03_18075 PF02874 ATP synthase alpha/beta family, beta-barrel domain F0T03_18075 PF18269 T3SS EscN ATPase C-terminal domain F0T03_18085 PF00771 FHIPEP family F0T03_18090 PF07201 HrpJ-like domain F0T03_18100 PF12833 Helix-turn-helix domain F0T03_18120 PF01514 Secretory protein of YscJ/FliF family F0T03_18140 PF01464 Transglycosylase SLT domain F0T03_18160 PF00512 His Kinase A (phospho-acceptor) domain F0T03_18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_18175 PF04632 Fusaric acid resistance protein family F0T03_18180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_18180 PF00529 HlyD membrane-fusion protein of T1SS F0T03_18200 PF00557 Metallopeptidase family M24 F0T03_18205 PF00005 ABC transporter F0T03_18210 PF01032 FecCD transport family F0T03_18215 PF01032 FecCD transport family F0T03_18220 PF01497 Periplasmic binding protein F0T03_18225 PF00970 Oxidoreductase FAD-binding domain F0T03_18225 PF00175 Oxidoreductase NAD-binding domain F0T03_18225 PF00042 Globin F0T03_18235 PF00083 Sugar (and other) transporter F0T03_18235 PF07690 Major Facilitator Superfamily F0T03_18240 PF00356 Bacterial regulatory proteins, lacI family F0T03_18245 PF01156 Inosine-uridine preferring nucleoside hydrolase F0T03_18250 PF02690 Na+/Pi-cotransporter F0T03_18255 PF07687 Peptidase dimerisation domain F0T03_18255 PF01546 Peptidase family M20/M25/M40 F0T03_18260 PF03806 AbgT putative transporter family F0T03_18275 PF00083 Sugar (and other) transporter F0T03_18275 PF08946 Osmosensory transporter coiled coil F0T03_18280 PF00873 AcrB/AcrD/AcrF family F0T03_18285 PF13533 Biotin-lipoyl like F0T03_18290 PF03466 LysR substrate binding domain F0T03_18290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_18295 PF05681 Fumarate hydratase (Fumerase) F0T03_18300 PF05683 Fumarase C-terminus F0T03_18305 PF00939 Sodium:sulfate symporter transmembrane region F0T03_18315 PF00563 EAL domain F0T03_18315 PF00990 Diguanylate cyclase, GGDEF domain F0T03_18315 PF08447 PAS fold F0T03_18315 PF08448 PAS fold F0T03_18325 PF02110 Hydroxyethylthiazole kinase family F0T03_18335 PF07690 Major Facilitator Superfamily F0T03_18340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_18340 PF00529 HlyD membrane-fusion protein of T1SS F0T03_18345 PF00196 Bacterial regulatory proteins, luxR family F0T03_18345 PF00072 Response regulator receiver domain F0T03_18350 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_18350 PF01627 Hpt domain F0T03_18350 PF00072 Response regulator receiver domain F0T03_18350 PF00512 His Kinase A (phospho-acceptor) domain F0T03_18350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_18355 PF02515 CoA-transferase family III F0T03_18360 PF03547 Membrane transport protein F0T03_18365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0T03_18365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0T03_18365 PF00205 Thiamine pyrophosphate enzyme, central domain F0T03_18370 PF02515 CoA-transferase family III F0T03_18375 PF10938 YfdX protein F0T03_18390 PF01300 Telomere recombination F0T03_18390 PF00708 Acylphosphatase F0T03_18390 PF07503 HypF finger F0T03_18390 PF17788 HypF Kae1-like domain F0T03_18395 PF00586 AIR synthase related protein, N-terminal domain F0T03_18395 PF02769 AIR synthase related protein, C-terminal domain F0T03_18400 PF01924 Hydrogenase formation hypA family F0T03_18405 PF01455 HupF/HypC family F0T03_18410 PF02492 CobW/HypB/UreG, nucleotide-binding domain F0T03_18415 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA F0T03_18420 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE F0T03_18425 PF01750 Hydrogenase maturation protease F0T03_18430 PF00374 Nickel-dependent hydrogenase F0T03_18435 PF03916 Polysulphide reductase, NrfD F0T03_18440 PF13247 4Fe-4S dicluster domain F0T03_18445 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal F0T03_18445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F0T03_18450 PF05433 Glycine zipper 2TM domain F0T03_18460 PF00486 Transcriptional regulatory protein, C terminal F0T03_18465 PF00158 Sigma-54 interaction domain F0T03_18470 PF00672 HAMP domain F0T03_18470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_18470 PF02203 Tar ligand binding domain homologue F0T03_18475 PF01370 NAD dependent epimerase/dehydratase family F0T03_18480 PF07690 Major Facilitator Superfamily F0T03_18490 PF00857 Isochorismatase family F0T03_18490 PF00550 Phosphopantetheine attachment site F0T03_18495 PF00501 AMP-binding enzyme F0T03_18495 PF13193 AMP-binding enzyme C-terminal domain F0T03_18500 PF00425 chorismate binding enzyme F0T03_18505 PF01497 Periplasmic binding protein F0T03_18510 PF05977 Transmembrane secretion effector F0T03_18515 PF01032 FecCD transport family F0T03_18520 PF01032 FecCD transport family F0T03_18525 PF00005 ABC transporter F0T03_18530 PF00975 Thioesterase domain F0T03_18530 PF00668 Condensation domain F0T03_18530 PF13193 AMP-binding enzyme C-terminal domain F0T03_18530 PF00550 Phosphopantetheine attachment site F0T03_18530 PF00501 AMP-binding enzyme F0T03_18535 PF03621 MbtH-like protein F0T03_18540 PF00756 Putative esterase F0T03_18540 PF11806 Domain of unknown function (DUF3327) F0T03_18545 PF07715 TonB-dependent Receptor Plug Domain F0T03_18545 PF00593 TonB dependent receptor F0T03_18555 PF11604 Copper binding periplasmic protein CusF F0T03_18565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0T03_18565 PF00529 HlyD membrane-fusion protein of T1SS F0T03_18570 PF00873 AcrB/AcrD/AcrF family F0T03_18595 PF03958 Bacterial type II/III secretion system short domain F0T03_18595 PF00263 Bacterial type II and III secretion system protein F0T03_18610 PF00437 Type II/IV secretion system protein F0T03_18645 PF02472 Biopolymer transport protein ExbD/TolR F0T03_18650 PF01618 MotA/TolQ/ExbB proton channel family F0T03_18655 PF01053 Cys/Met metabolism PLP-dependent enzyme F0T03_18660 PF09335 SNARE associated Golgi protein F0T03_18665 PF12833 Helix-turn-helix domain F0T03_18665 PF06719 AraC-type transcriptional regulator N-terminus F0T03_18675 PF00465 Iron-containing alcohol dehydrogenase F0T03_18680 PF00248 Aldo/keto reductase family F0T03_18685 PF04055 Radical SAM superfamily F0T03_18685 PF08497 Radical SAM N-terminal F0T03_18685 PF11842 Domain of unknown function (DUF3362) F0T03_18690 PF07732 Multicopper oxidase F0T03_18690 PF07731 Multicopper oxidase F0T03_18695 PF01553 Acyltransferase F0T03_18700 PF00521 DNA gyrase/topoisomerase IV, subunit A F0T03_18700 PF03989 DNA gyrase C-terminal domain, beta-propeller F0T03_18710 PF02525 Flavodoxin-like fold F0T03_18720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_18720 PF03466 LysR substrate binding domain F0T03_18725 PF01751 Toprim domain F0T03_18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_18725 PF00204 DNA gyrase B F0T03_18725 PF00986 DNA gyrase B subunit, carboxyl terminus F0T03_18730 PF05728 Uncharacterised protein family (UPF0227) F0T03_18735 PF00149 Calcineurin-like phosphoesterase F0T03_18740 PF06853 Protein of unknown function (DUF1249) F0T03_18745 PF00293 NUDIX domain F0T03_18750 PF02321 Outer membrane efflux protein F0T03_18755 PF06693 Protein of unknown function (DUF1190) F0T03_18760 PF03738 Glutathionylspermidine synthase preATP-grasp F0T03_18765 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase F0T03_18770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F0T03_18775 PF04380 Membrane fusogenic activity F0T03_18780 PF13520 Amino acid permease F0T03_18785 PF00294 pfkB family carbohydrate kinase F0T03_18785 PF01467 Cytidylyltransferase-like F0T03_18790 PF08335 GlnD PII-uridylyltransferase F0T03_18790 PF03710 Glutamate-ammonia ligase adenylyltransferase F0T03_18795 PF01928 CYTH domain F0T03_18800 PF08239 Bacterial SH3 domain F0T03_18805 PF12627 Probable RNA and SrmB- binding site of polymerase A F0T03_18805 PF01743 Poly A polymerase head domain F0T03_18805 PF01966 HD domain F0T03_18810 PF02673 Bacitracin resistance protein BacA F0T03_18815 PF02152 Dihydroneopterin aldolase F0T03_18820 PF02660 Glycerol-3-phosphate acyltransferase F0T03_18825 PF00814 Glycoprotease family F0T03_18830 PF01165 Ribosomal protein S21 F0T03_18835 PF01807 CHC2 zinc finger F0T03_18835 PF10410 DnaB-helicase binding domain of primase F0T03_18835 PF08278 DNA primase DnaG DnaB-binding F0T03_18835 PF08275 DNA primase catalytic core, N-terminal domain F0T03_18840 PF04545 Sigma-70, region 4 F0T03_18840 PF04542 Sigma-70 region 2 F0T03_18840 PF00140 Sigma-70 factor, region 1.2 F0T03_18840 PF03979 Sigma-70 factor, region 1.1 F0T03_18840 PF04546 Sigma-70, non-essential region F0T03_18840 PF04539 Sigma-70 region 3 F0T03_18855 PF06755 CbtA_toxin of type IV toxin-antitoxin system F0T03_18860 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A F0T03_18865 PF04002 RadC-like JAB domain F0T03_18870 PF01545 Cation efflux family F0T03_18870 PF16916 Dimerisation domain of Zinc Transporter F0T03_18900 PF13280 WYL domain F0T03_18900 PF08220 DeoR-like helix-turn-helix domain F0T03_18905 PF06067 Domain of unknown function (DUF932) F0T03_18910 PF01926 50S ribosome-binding GTPase F0T03_18915 PF12161 HsdM N-terminal domain F0T03_18915 PF02384 N-6 DNA Methylase F0T03_18920 PF01420 Type I restriction modification DNA specificity domain F0T03_18930 PF12008 Type I restriction and modification enzyme - subunit R C terminal F0T03_18930 PF18766 SWI2/SNF2 ATPase F0T03_18930 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) F0T03_18940 PF07510 Protein of unknown function (DUF1524) F0T03_18945 PF14130 Domain of unknown function (DUF4297) F0T03_18945 PF08878 Domain of unknown function (DUF1837) F0T03_18950 PF00271 Helicase conserved C-terminal domain F0T03_18995 PF10431 C-terminal, D2-small domain, of ClpB protein F0T03_18995 PF02861 Clp amino terminal domain, pathogenicity island component F0T03_18995 PF00004 ATPase family associated with various cellular activities (AAA) F0T03_18995 PF07724 AAA domain (Cdc48 subfamily) F0T03_18995 PF17871 AAA lid domain F0T03_19010 PF13148 Protein of unknown function (DUF3987) F0T03_19030 PF02661 Fic/DOC family F0T03_19050 PF04960 Glutaminase F0T03_19055 PF13520 Amino acid permease F0T03_19060 PF00282 Pyridoxal-dependent decarboxylase conserved domain F0T03_19065 PF01638 HxlR-like helix-turn-helix F0T03_19070 PF07690 Major Facilitator Superfamily F0T03_19075 PF03729 Short repeat of unknown function (DUF308) F0T03_19080 PF00892 EamA-like transporter family F0T03_19085 PF08279 HTH domain F0T03_19085 PF13280 WYL domain F0T03_19095 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_19095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F0T03_19100 PF05175 Methyltransferase small domain F0T03_19110 PF01863 Protein of unknown function DUF45 F0T03_19115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F0T03_19120 PF03741 Integral membrane protein TerC family F0T03_19125 PF00375 Sodium:dicarboxylate symporter family F0T03_19130 PF10688 Bacterial inner membrane protein F0T03_19135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus F0T03_19135 PF08666 SAF domain F0T03_19140 PF01232 Mannitol dehydrogenase Rossmann domain F0T03_19140 PF08125 Mannitol dehydrogenase C-terminal domain F0T03_19145 PF02614 Glucuronate isomerase F0T03_19150 PF07690 Major Facilitator Superfamily F0T03_19155 PF07729 FCD domain F0T03_19155 PF00392 Bacterial regulatory proteins, gntR family F0T03_19165 PF09335 SNARE associated Golgi protein F0T03_19170 PF13721 SecD export protein N-terminal TM region F0T03_19180 PF05957 Bacterial protein of unknown function (DUF883) F0T03_19185 PF07332 Putative Actinobacterial Holin-X, holin superfamily III F0T03_19190 PF13997 YqjK-like protein F0T03_19195 PF07681 DoxX F0T03_19200 PF13409 Glutathione S-transferase, N-terminal domain F0T03_19205 PF03466 LysR substrate binding domain F0T03_19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_19210 PF02678 Pirin F0T03_19210 PF17954 Quercetinase C-terminal cupin domain F0T03_19215 PF08240 Alcohol dehydrogenase GroES-like domain F0T03_19215 PF00107 Zinc-binding dehydrogenase F0T03_19220 PF00248 Aldo/keto reductase family F0T03_19225 PF03466 LysR substrate binding domain F0T03_19225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_19235 PF03797 Autotransporter beta-domain F0T03_19250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0T03_19255 PF04348 LppC putative lipoprotein F0T03_19260 PF02021 Uncharacterised protein family UPF0102 F0T03_19265 PF13580 SIS domain F0T03_19270 PF04972 BON domain F0T03_19275 PF00912 Transglycosylase F0T03_19285 PF00072 Response regulator receiver domain F0T03_19285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_19285 PF00512 His Kinase A (phospho-acceptor) domain F0T03_19285 PF00989 PAS fold F0T03_19285 PF01627 Hpt domain F0T03_19285 PF18415 Histidine kinase receptor ArcB trans-membrane domain F0T03_19290 PF04055 Radical SAM superfamily F0T03_19290 PF16199 Radical_SAM C-terminal domain F0T03_19295 PF01493 GXGXG motif F0T03_19295 PF01645 Conserved region in glutamate synthase F0T03_19295 PF00310 Glutamine amidotransferases class-II F0T03_19295 PF04898 Glutamate synthase central domain F0T03_19300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F0T03_19300 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_19310 PF04386 Stringent starvation protein B F0T03_19315 PF00043 Glutathione S-transferase, C-terminal domain F0T03_19315 PF02798 Glutathione S-transferase, N-terminal domain F0T03_19320 PF00380 Ribosomal protein S9/S16 F0T03_19325 PF00572 Ribosomal protein L13 F0T03_19330 PF03969 AFG1-like ATPase F0T03_19335 PF06295 Protein of unknown function (DUF1043) F0T03_19340 PF13180 PDZ domain F0T03_19340 PF00595 PDZ domain F0T03_19345 PF13180 PDZ domain F0T03_19350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F0T03_19355 PF01722 BolA-like protein F0T03_19360 PF13466 STAS domain F0T03_19365 PF05494 MlaC protein F0T03_19370 PF02470 MlaD protein F0T03_19375 PF02405 Permease MlaE F0T03_19380 PF00005 ABC transporter F0T03_19385 PF01699 Sodium/calcium exchanger protein F0T03_19390 PF00571 CBS domain F0T03_19390 PF01380 SIS domain F0T03_19400 PF06835 Lipopolysaccharide-assembly, LptC-related F0T03_19405 PF03968 OstA-like protein F0T03_19410 PF00005 ABC transporter F0T03_19410 PF12399 Branched-chain amino acid ATP-binding cassette transporter F0T03_19415 PF04963 Sigma-54 factor, core binding domain F0T03_19415 PF04552 Sigma-54, DNA binding domain F0T03_19415 PF00309 Sigma-54 factor, Activator interacting domain (AID) F0T03_19420 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F0T03_19425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F0T03_19430 PF03668 P-loop ATPase protein family F0T03_19435 PF00381 PTS HPr component phosphorylation site F0T03_19445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F0T03_19445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F0T03_19450 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain F0T03_19450 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain F0T03_19455 PF01042 Endoribonuclease L-PSP F0T03_19460 PF14403 Circularly permuted ATP-grasp type 2 F0T03_19465 PF04168 A predicted alpha-helical domain with a conserved ER motif. F0T03_19465 PF14403 Circularly permuted ATP-grasp type 2 F0T03_19480 PF11941 Domain of unknown function (DUF3459) F0T03_19480 PF00128 Alpha amylase, catalytic domain F0T03_19485 PF02378 Phosphotransferase system, EIIC F0T03_19485 PF00367 phosphotransferase system, EIIB F0T03_19490 PF00356 Bacterial regulatory proteins, lacI family F0T03_19495 PF00690 Cation transporter/ATPase, N-terminus F0T03_19495 PF00689 Cation transporting ATPase, C-terminus F0T03_19500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F0T03_19500 PF08279 HTH domain F0T03_19500 PF05043 Mga helix-turn-helix domain F0T03_19500 PF00874 PRD domain F0T03_19505 PF10282 Lactonase, 7-bladed beta-propeller F0T03_19510 PF07071 KDGP aldolase F0T03_19515 PF03841 L-seryl-tRNA selenium transferase F0T03_19520 PF01979 Amidohydrolase family F0T03_19550 PF01272 Transcription elongation factor, GreA/GreB, C-term F0T03_19550 PF14760 Rnk N-terminus F0T03_19555 PF07361 Cytochrome b562 F0T03_19560 PF01523 Putative modulator of DNA gyrase F0T03_19565 PF04751 Protein of unknown function (DUF615) F0T03_19570 PF01337 Barstar (barnase inhibitor) F0T03_19580 PF00171 Aldehyde dehydrogenase family F0T03_19585 PF04632 Fusaric acid resistance protein family F0T03_19590 PF13533 Biotin-lipoyl like F0T03_19595 PF07869 Protein of unknown function (DUF1656) F0T03_19600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_19600 PF03466 LysR substrate binding domain F0T03_19605 PF01523 Putative modulator of DNA gyrase F0T03_19610 PF00795 Carbon-nitrogen hydrolase F0T03_19615 PF13116 Protein of unknown function F0T03_19615 PF13502 AsmA-like C-terminal region F0T03_19620 PF10150 Ribonuclease E/G family F0T03_19620 PF00575 S1 RNA binding domain F0T03_19625 PF02545 Maf-like protein F0T03_19630 PF04093 rod shape-determining protein MreD F0T03_19635 PF04085 rod shape-determining protein MreC F0T03_19645 PF00990 Diguanylate cyclase, GGDEF domain F0T03_19645 PF17157 Gammaproteobacterial periplasmic sensor domain F0T03_19645 PF00563 EAL domain F0T03_19650 PF08240 Alcohol dehydrogenase GroES-like domain F0T03_19650 PF00107 Zinc-binding dehydrogenase F0T03_19655 PF00174 Oxidoreductase molybdopterin binding domain F0T03_19660 PF01794 Ferric reductase like transmembrane component F0T03_19665 PF01220 Dehydroquinase class II F0T03_19670 PF00364 Biotin-requiring enzyme F0T03_19675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F0T03_19675 PF00289 Biotin carboxylase, N-terminal domain F0T03_19675 PF02785 Biotin carboxylase C-terminal domain F0T03_19680 PF06196 Protein of unknown function (DUF997) F0T03_19685 PF00474 Sodium:solute symporter family F0T03_19695 PF01207 Dihydrouridine synthase (Dus) F0T03_19700 PF02954 Bacterial regulatory protein, Fis family F0T03_19705 PF00072 Response regulator receiver domain F0T03_19705 PF00990 Diguanylate cyclase, GGDEF domain F0T03_19710 PF05433 Glycine zipper 2TM domain F0T03_19715 PF00313 'Cold-shock' DNA-binding domain F0T03_19720 PF00313 'Cold-shock' DNA-binding domain F0T03_19725 PF00939 Sodium:sulfate symporter transmembrane region F0T03_19730 PF03279 Bacterial lipid A biosynthesis acyltransferase F0T03_19740 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_19745 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_19750 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_19755 PF00005 ABC transporter F0T03_19765 PF03788 LrgA family F0T03_19770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_19770 PF03466 LysR substrate binding domain F0T03_19775 PF00999 Sodium/hydrogen exchanger family F0T03_19780 PF00860 Permease family F0T03_19790 PF00436 Single-strand binding protein family F0T03_19795 PF17760 UvrA interaction domain F0T03_19795 PF17755 UvrA DNA-binding domain F0T03_19795 PF00005 ABC transporter F0T03_19800 PF04237 YjbR F0T03_19805 PF00155 Aminotransferase class I and II F0T03_19810 PF01168 Alanine racemase, N-terminal domain F0T03_19810 PF00842 Alanine racemase, C-terminal domain F0T03_19815 PF00772 DnaB-like helicase N terminal domain F0T03_19815 PF03796 DnaB-like helicase C terminal domain F0T03_19820 PF08240 Alcohol dehydrogenase GroES-like domain F0T03_19820 PF00107 Zinc-binding dehydrogenase F0T03_19830 PF09583 Phage shock protein G (Phageshock_PspG) F0T03_19835 PF01207 Dihydrouridine synthase (Dus) F0T03_19840 PF01757 Acyltransferase family F0T03_19845 PF01475 Ferric uptake regulator family F0T03_19850 PF05532 CsbD-like F0T03_19855 PF00717 Peptidase S24-like F0T03_19855 PF01726 LexA DNA binding domain F0T03_19860 PF01219 Prokaryotic diacylglycerol kinase F0T03_19865 PF01553 Acyltransferase F0T03_19870 PF01040 UbiA prenyltransferase family F0T03_19875 PF04345 Chorismate lyase F0T03_19885 PF07148 Maltose operon periplasmic protein precursor (MalM) F0T03_19890 PF02264 LamB porin F0T03_19895 PF00005 ABC transporter F0T03_19895 PF17912 MalK OB fold domain F0T03_19905 PF01547 Bacterial extracellular solute-binding protein F0T03_19910 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_19910 PF14785 Maltose transport system permease protein MalF P2 domain F0T03_19915 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_19920 PF06146 Phosphate-starvation-inducible E F0T03_19925 PF00342 Phosphoglucose isomerase F0T03_19930 PF01842 ACT domain F0T03_19930 PF00696 Amino acid kinase family F0T03_19935 PF01758 Sodium Bile acid symporter family F0T03_19940 PF00809 Pterin binding enzyme F0T03_19940 PF02965 Vitamin B12 dependent methionine synthase, activation domain F0T03_19940 PF02607 B12 binding domain F0T03_19940 PF02310 B12 binding domain F0T03_19940 PF02574 Homocysteine S-methyltransferase F0T03_19945 PF09339 IclR helix-turn-helix domain F0T03_19945 PF01614 Bacterial transcriptional regulator F0T03_19950 PF00989 PAS fold F0T03_19950 PF00512 His Kinase A (phospho-acceptor) domain F0T03_19950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_19955 PF02954 Bacterial regulatory protein, Fis family F0T03_19955 PF00072 Response regulator receiver domain F0T03_19955 PF00158 Sigma-54 interaction domain F0T03_19960 PF01144 Coenzyme A transferase F0T03_19965 PF01144 Coenzyme A transferase F0T03_19970 PF02667 Short chain fatty acid transporter F0T03_19975 PF00108 Thiolase, N-terminal domain F0T03_19975 PF02803 Thiolase, C-terminal domain F0T03_19980 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) F0T03_19985 PF00463 Isocitrate lyase family F0T03_19990 PF01274 Malate synthase F0T03_19995 PF04204 Homoserine O-succinyltransferase F0T03_20045 PF01808 AICARFT/IMPCHase bienzyme F0T03_20045 PF02142 MGS-like domain F0T03_20050 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F0T03_20050 PF02843 Phosphoribosylglycinamide synthetase, C domain F0T03_20050 PF02844 Phosphoribosylglycinamide synthetase, N domain F0T03_20055 PF07356 Protein of unknown function (DUF1481) F0T03_20060 PF00216 Bacterial DNA-binding protein F0T03_20065 PF04222 Protein of unknown function (DUF416) F0T03_20070 PF04493 Endonuclease V F0T03_20075 PF01208 Uroporphyrinogen decarboxylase (URO-D) F0T03_20080 PF00293 NUDIX domain F0T03_20080 PF09297 NADH pyrophosphatase zinc ribbon domain F0T03_20085 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ F0T03_20090 PF01964 Radical SAM ThiC family F0T03_20090 PF13667 ThiC-associated domain F0T03_20095 PF02581 Thiamine monophosphate synthase F0T03_20100 PF00899 ThiF family F0T03_20105 PF02597 ThiS family F0T03_20110 PF05690 Thiazole biosynthesis protein ThiG F0T03_20115 PF04055 Radical SAM superfamily F0T03_20115 PF06968 Biotin and Thiamin Synthesis associated domain F0T03_20120 PF04998 RNA polymerase Rpb1, domain 5 F0T03_20120 PF00623 RNA polymerase Rpb1, domain 2 F0T03_20120 PF05000 RNA polymerase Rpb1, domain 4 F0T03_20120 PF04997 RNA polymerase Rpb1, domain 1 F0T03_20120 PF04983 RNA polymerase Rpb1, domain 3 F0T03_20125 PF04561 RNA polymerase Rpb2, domain 2 F0T03_20125 PF04565 RNA polymerase Rpb2, domain 3 F0T03_20125 PF00562 RNA polymerase Rpb2, domain 6 F0T03_20125 PF04563 RNA polymerase beta subunit F0T03_20125 PF04560 RNA polymerase Rpb2, domain 7 F0T03_20125 PF10385 RNA polymerase beta subunit external 1 domain F0T03_20130 PF00542 Ribosomal protein L7/L12 C-terminal domain F0T03_20130 PF16320 Ribosomal protein L7/L12 dimerisation domain F0T03_20135 PF00466 Ribosomal protein L10 F0T03_20140 PF00687 Ribosomal protein L1p/L10e family F0T03_20145 PF00298 Ribosomal protein L11, RNA binding domain F0T03_20145 PF03946 Ribosomal protein L11, N-terminal domain F0T03_20150 PF00467 KOW motif F0T03_20150 PF02357 Transcription termination factor nusG F0T03_20155 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F0T03_20165 PF03143 Elongation factor Tu C-terminal domain F0T03_20165 PF03144 Elongation factor Tu domain 2 F0T03_20165 PF00009 Elongation factor Tu GTP binding domain F0T03_20190 PF13673 Acetyltransferase (GNAT) domain F0T03_20195 PF00485 Phosphoribulokinase / Uridine kinase family F0T03_20200 PF02237 Biotin protein ligase C terminal domain F0T03_20200 PF03099 Biotin/lipoate A/B protein ligase family F0T03_20200 PF08279 HTH domain F0T03_20205 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F0T03_20205 PF01565 FAD binding domain F0T03_20235 PF00132 Bacterial transferase hexapeptide (six repeats) F0T03_20240 PF01488 Shikimate / quinate 5-dehydrogenase F0T03_20240 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F0T03_20240 PF08501 Shikimate dehydrogenase substrate binding domain F0T03_20245 PF01300 Telomere recombination F0T03_20250 PF01396 Topoisomerase DNA binding C4 zinc finger F0T03_20255 PF04361 Protein of unknown function (DUF494) F0T03_20260 PF02481 DNA recombination-mediator protein A F0T03_20260 PF17782 DprA winged helix domain F0T03_20265 PF01327 Polypeptide deformylase F0T03_20270 PF02911 Formyl transferase, C-terminal domain F0T03_20270 PF00551 Formyl transferase F0T03_20275 PF01029 NusB family F0T03_20275 PF01189 16S rRNA methyltransferase RsmB/F F0T03_20280 PF02080 TrkA-C domain F0T03_20280 PF02254 TrkA-N domain F0T03_20285 PF01741 Large-conductance mechanosensitive channel, MscL F0T03_20290 PF03889 Alternative ribosome-rescue factor A F0T03_20295 PF13411 MerR HTH family regulatory protein F0T03_20300 PF09350 Domain of unknown function (DUF1992) F0T03_20305 PF01196 Ribosomal protein L17 F0T03_20310 PF01000 RNA polymerase Rpb3/RpoA insert domain F0T03_20310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F0T03_20310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F0T03_20315 PF01479 S4 domain F0T03_20315 PF00163 Ribosomal protein S4/S9 N-terminal domain F0T03_20320 PF00411 Ribosomal protein S11 F0T03_20325 PF00416 Ribosomal protein S13/S18 F0T03_20330 PF00444 Ribosomal protein L36 F0T03_20335 PF00344 SecY translocase F0T03_20340 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F0T03_20345 PF00327 Ribosomal protein L30p/L7e F0T03_20350 PF03719 Ribosomal protein S5, C-terminal domain F0T03_20350 PF00333 Ribosomal protein S5, N-terminal domain F0T03_20355 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F0T03_20360 PF00347 Ribosomal protein L6 F0T03_20365 PF00410 Ribosomal protein S8 F0T03_20370 PF00253 Ribosomal protein S14p/S29e F0T03_20375 PF00673 ribosomal L5P family C-terminus F0T03_20375 PF00281 Ribosomal protein L5 F0T03_20380 PF00467 KOW motif F0T03_20380 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F0T03_20385 PF00238 Ribosomal protein L14p/L23e F0T03_20390 PF00366 Ribosomal protein S17 F0T03_20395 PF00831 Ribosomal L29 protein F0T03_20400 PF00252 Ribosomal protein L16p/L10e F0T03_20405 PF00189 Ribosomal protein S3, C-terminal domain F0T03_20405 PF07650 KH domain F0T03_20410 PF00237 Ribosomal protein L22p/L17e F0T03_20415 PF00203 Ribosomal protein S19 F0T03_20420 PF00181 Ribosomal Proteins L2, RNA binding domain F0T03_20420 PF03947 Ribosomal Proteins L2, C-terminal domain F0T03_20425 PF00276 Ribosomal protein L23 F0T03_20430 PF00573 Ribosomal protein L4/L1 family F0T03_20435 PF00297 Ribosomal protein L3 F0T03_20440 PF00338 Ribosomal protein S10p/S20e F0T03_20445 PF00210 Ferritin-like domain F0T03_20450 PF04324 BFD-like [2Fe-2S] binding domain F0T03_20455 PF03143 Elongation factor Tu C-terminal domain F0T03_20455 PF03144 Elongation factor Tu domain 2 F0T03_20455 PF00009 Elongation factor Tu GTP binding domain F0T03_20460 PF00009 Elongation factor Tu GTP binding domain F0T03_20460 PF03144 Elongation factor Tu domain 2 F0T03_20460 PF14492 Elongation Factor G, domain II F0T03_20460 PF03764 Elongation factor G, domain IV F0T03_20460 PF00679 Elongation factor G C-terminus F0T03_20465 PF00177 Ribosomal protein S7p/S5e F0T03_20470 PF00164 Ribosomal protein S12/S23 F0T03_20475 PF04077 DsrH like protein F0T03_20480 PF02635 DsrE/DsrF-like family F0T03_20485 PF02635 DsrE/DsrF-like family F0T03_20490 PF08348 YheO-like PAS domain F0T03_20490 PF13309 HTH domain F0T03_20495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0T03_20495 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F0T03_20500 PF04102 SlyX F0T03_20505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0T03_20510 PF09526 Probable metal-binding protein (DUF2387) F0T03_20515 PF00999 Sodium/hydrogen exchanger family F0T03_20515 PF02254 TrkA-N domain F0T03_20520 PF02525 Flavodoxin-like fold F0T03_20525 PF12848 ABC transporter F0T03_20525 PF00005 ABC transporter F0T03_20535 PF02668 Taurine catabolism dioxygenase TauD, TfdA family F0T03_20540 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_20545 PF00005 ABC transporter F0T03_20550 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F0T03_20555 PF02567 Phenazine biosynthesis-like protein F0T03_20560 PF01810 LysE type translocator F0T03_20565 PF00561 alpha/beta hydrolase fold F0T03_20570 PF06794 Uncharacterised protein family (UPF0270) F0T03_20575 PF00485 Phosphoribulokinase / Uridine kinase family F0T03_20580 PF02566 OsmC-like protein F0T03_20585 PF13545 Crp-like helix-turn-helix domain F0T03_20585 PF00027 Cyclic nucleotide-binding domain F0T03_20590 PF12805 FUSC-like inner membrane protein yccS F0T03_20595 PF00202 Aminotransferase class-III F0T03_20600 PF00117 Glutamine amidotransferase class-I F0T03_20605 PF05872 Bacterial protein of unknown function (DUF853) F0T03_20610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F0T03_20615 PF11975 Family 4 glycosyl hydrolase C-terminal domain F0T03_20615 PF02056 Family 4 glycosyl hydrolase F0T03_20620 PF00356 Bacterial regulatory proteins, lacI family F0T03_20635 PF07690 Major Facilitator Superfamily F0T03_20640 PF07969 Amidohydrolase family F0T03_20645 PF04324 BFD-like [2Fe-2S] binding domain F0T03_20645 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_20645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F0T03_20645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F0T03_20645 PF18267 Rubredoxin NAD+ reductase C-terminal domain F0T03_20650 PF13806 Rieske-like [2Fe-2S] domain F0T03_20655 PF01226 Formate/nitrite transporter F0T03_20660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0T03_20660 PF14824 Sirohaem biosynthesis protein central F0T03_20660 PF10414 Sirohaem synthase dimerisation region F0T03_20665 PF00579 tRNA synthetases class I (W and Y) F0T03_20670 PF13419 Haloacid dehalogenase-like hydrolase F0T03_20675 PF00834 Ribulose-phosphate 3 epimerase family F0T03_20680 PF02086 D12 class N6 adenine-specific DNA methyltransferase F0T03_20685 PF05036 Sporulation related domain F0T03_20690 PF01761 3-dehydroquinate synthase F0T03_20695 PF01202 Shikimate kinase F0T03_20700 PF03958 Bacterial type II/III secretion system short domain F0T03_20700 PF00263 Bacterial type II and III secretion system protein F0T03_20725 PF00905 Penicillin binding protein transpeptidase domain F0T03_20725 PF00912 Transglycosylase F0T03_20725 PF17092 Penicillin-binding protein OB-like domain F0T03_20730 PF00293 NUDIX domain F0T03_20735 PF07095 Intracellular growth attenuator protein IgaA F0T03_20740 PF13419 Haloacid dehalogenase-like hydrolase F0T03_20745 PF01479 S4 domain F0T03_20750 PF01430 Hsp33 protein F0T03_20755 PF01293 Phosphoenolpyruvate carboxykinase F0T03_20760 PF00512 His Kinase A (phospho-acceptor) domain F0T03_20760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_20760 PF00672 HAMP domain F0T03_20765 PF00072 Response regulator receiver domain F0T03_20765 PF00486 Transcriptional regulatory protein, C terminal F0T03_20770 PF01272 Transcription elongation factor, GreA/GreB, C-term F0T03_20770 PF03449 Transcription elongation factor, N-terminal F0T03_20775 PF17674 HHH domain F0T03_20775 PF00575 S1 RNA binding domain F0T03_20775 PF16921 Tex protein YqgF-like domain F0T03_20775 PF09371 Tex-like protein N-terminal domain F0T03_20780 PF01593 Flavin containing amine oxidoreductase F0T03_20785 PF04023 FeoA domain F0T03_20790 PF07664 Ferrous iron transport protein B C terminus F0T03_20790 PF17910 FeoB cytosolic helical domain F0T03_20790 PF07670 Nucleoside recognition F0T03_20790 PF02421 Ferrous iron transport protein B F0T03_20795 PF09012 FeoC like transcriptional regulator F0T03_20800 PF07338 Protein of unknown function (DUF1471) F0T03_20805 PF00561 alpha/beta hydrolase fold F0T03_20810 PF00156 Phosphoribosyl transferase domain F0T03_20815 PF01521 Iron-sulphur cluster biosynthesis F0T03_20815 PF01106 NifU-like domain F0T03_20820 PF02446 4-alpha-glucanotransferase F0T03_20825 PF00343 Carbohydrate phosphorylase F0T03_20830 PF17874 MalT-like TPR region F0T03_20830 PF00196 Bacterial regulatory proteins, luxR family F0T03_20835 PF00581 Rhodanese-like domain F0T03_20840 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease F0T03_20840 PF01694 Rhomboid family F0T03_20845 PF08220 DeoR-like helix-turn-helix domain F0T03_20845 PF00455 DeoR C terminal sensor domain F0T03_20850 PF01266 FAD dependent oxidoreductase F0T03_20850 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F0T03_20855 PF00343 Carbohydrate phosphorylase F0T03_20860 PF00534 Glycosyl transferases group 1 F0T03_20860 PF08323 Starch synthase catalytic domain F0T03_20865 PF00483 Nucleotidyl transferase F0T03_20870 PF18390 Glycogen debranching enzyme C-terminal domain F0T03_20870 PF00128 Alpha amylase, catalytic domain F0T03_20870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F0T03_20875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F0T03_20875 PF02806 Alpha amylase, C-terminal all-beta domain F0T03_20875 PF00128 Alpha amylase, catalytic domain F0T03_20880 PF07694 5TMR of 5TMR-LYT F0T03_20880 PF06580 Histidine kinase F0T03_20885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_20885 PF03466 LysR substrate binding domain F0T03_20890 PF03306 Alpha-acetolactate decarboxylase F0T03_20895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0T03_20895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0T03_20895 PF00205 Thiamine pyrophosphate enzyme, central domain F0T03_20900 PF02774 Semialdehyde dehydrogenase, dimerisation domain F0T03_20900 PF01118 Semialdehyde dehydrogenase, NAD binding domain F0T03_20905 PF01914 MarC family integral membrane protein F0T03_20910 PF01202 Shikimate kinase F0T03_20915 PF02447 GntP family permease F0T03_20920 PF00356 Bacterial regulatory proteins, lacI family F0T03_20920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F0T03_20925 PF17954 Quercetinase C-terminal cupin domain F0T03_20925 PF02678 Pirin F0T03_20935 PF00583 Acetyltransferase (GNAT) family F0T03_20940 PF01261 Xylose isomerase-like TIM barrel F0T03_20950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F0T03_20950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F0T03_20955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0T03_20955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0T03_20955 PF00205 Thiamine pyrophosphate enzyme, central domain F0T03_20960 PF00294 pfkB family carbohydrate kinase F0T03_20970 PF04962 KduI/IolB family F0T03_20975 PF00171 Aldehyde dehydrogenase family F0T03_20980 PF00083 Sugar (and other) transporter F0T03_20990 PF07690 Major Facilitator Superfamily F0T03_20995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_20995 PF03466 LysR substrate binding domain F0T03_21005 PF12557 Cob(I)alamin adenosyltransferase N terminal F0T03_21005 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP F0T03_21010 PF05683 Fumarase C-terminus F0T03_21010 PF05681 Fumarate hydratase (Fumerase) F0T03_21015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0T03_21015 PF03466 LysR substrate binding domain F0T03_21020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0T03_21020 PF10414 Sirohaem synthase dimerisation region F0T03_21020 PF14824 Sirohaem biosynthesis protein central F0T03_21025 PF00288 GHMP kinases N terminal domain F0T03_21030 PF02310 B12 binding domain F0T03_21035 PF13941 MutL protein F0T03_21040 PF06368 Methylaspartate mutase E chain (MutE) F0T03_21045 PF05034 Methylaspartate ammonia-lyase N-terminus F0T03_21045 PF07476 Methylaspartate ammonia-lyase C-terminus F0T03_21060 PF00375 Sodium:dicarboxylate symporter family F0T03_21070 PF01384 Phosphate transporter family F0T03_21075 PF10625 Universal stress protein B (UspB) F0T03_21080 PF00582 Universal stress protein family F0T03_21085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F0T03_21085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F0T03_21090 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) F0T03_21090 PF00413 Matrixin F0T03_21090 PF08548 Peptidase M10 serralysin C terminal F0T03_21095 PF04445 Putative SAM-dependent methyltransferase F0T03_21100 PF01432 Peptidase family M3 F0T03_21105 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ F0T03_21110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F0T03_21110 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0T03_21120 PF08671 Anti-repressor SinI F0T03_21120 PF01381 Helix-turn-helix F0T03_21125 PF00107 Zinc-binding dehydrogenase F0T03_21125 PF08240 Alcohol dehydrogenase GroES-like domain F0T03_21135 PF03631 Virulence factor BrkB F0T03_21140 PF02611 CDP-diacylglycerol pyrophosphatase F0T03_21145 PF05170 AsmA family F0T03_21150 PF00563 EAL domain F0T03_21155 PF01361 Tautomerase enzyme F0T03_21160 PF00294 pfkB family carbohydrate kinase F0T03_21165 PF00675 Insulinase (Peptidase family M16) F0T03_21165 PF05193 Peptidase M16 inactive domain F0T03_21170 PF00375 Sodium:dicarboxylate symporter family F0T03_21175 PF06917 Periplasmic pectate lyase F0T03_21180 PF06178 Oligogalacturonate-specific porin protein (KdgM) F0T03_21185 PF00990 Diguanylate cyclase, GGDEF domain F0T03_21185 PF00672 HAMP domain F0T03_21185 PF17154 Gammaproteobacterial periplasmic sensor domain F0T03_21185 PF00563 EAL domain F0T03_21195 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) F0T03_21200 PF01270 Glycosyl hydrolases family 8 F0T03_21205 PF03170 Bacterial cellulose synthase subunit F0T03_21210 PF00535 Glycosyl transferase family 2 F0T03_21210 PF07238 PilZ domain F0T03_21210 PF03552 Cellulose synthase F0T03_21225 PF10995 Cellulose biosynthesis GIL F0T03_21230 PF11120 Cellulose biosynthesis protein BcsF F0T03_21235 PF11658 Cellulose biosynthesis protein BcsG F0T03_21240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0T03_21240 PF00005 ABC transporter F0T03_21245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0T03_21245 PF00005 ABC transporter F0T03_21250 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_21250 PF12911 N-terminal TM domain of oligopeptide transport permease C F0T03_21255 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_21260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0T03_21265 PF05860 haemagglutination activity domain F0T03_21265 PF13332 Hemagglutinin repeat F0T03_21265 PF13018 Extended Signal Peptide of Type V secretion system F0T03_21265 PF04829 Pre-toxin domain with VENN motif F0T03_21270 PF17287 POTRA domain F0T03_21270 PF08479 POTRA domain, ShlB-type F0T03_21270 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB F0T03_21275 PF05860 haemagglutination activity domain F0T03_21275 PF13018 Extended Signal Peptide of Type V secretion system F0T03_21275 PF03543 Yersinia/Haemophilus virulence surface antigen F0T03_21275 PF02661 Fic/DOC family F0T03_21275 PF13332 Hemagglutinin repeat F0T03_21285 PF07690 Major Facilitator Superfamily F0T03_21290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_21290 PF07730 Histidine kinase F0T03_21290 PF05231 MASE1 F0T03_21295 PF00072 Response regulator receiver domain F0T03_21295 PF00196 Bacterial regulatory proteins, luxR family F0T03_21300 PF08019 Phosphoethanolamine transferase EptA/EptB F0T03_21300 PF00884 Sulfatase F0T03_21305 PF02566 OsmC-like protein F0T03_21310 PF12146 Serine aminopeptidase, S33 F0T03_21315 PF16363 GDP-mannose 4,6 dehydratase F0T03_21325 PF00535 Glycosyl transferase family 2 F0T03_21330 PF00483 Nucleotidyl transferase F0T03_21350 PF00324 Amino acid permease F0T03_21355 PF00221 Aromatic amino acid lyase F0T03_21360 PF01175 Urocanase Rossmann-like domain F0T03_21360 PF17392 Urocanase C-terminal domain F0T03_21360 PF17391 Urocanase N-terminal domain F0T03_21385 PF00484 Carbonic anhydrase F0T03_21390 PF03616 Sodium/glutamate symporter F0T03_21400 PF12833 Helix-turn-helix domain F0T03_21405 PF02653 Branched-chain amino acid transport system / permease component F0T03_21410 PF00005 ABC transporter F0T03_21415 PF13407 Periplasmic binding protein domain F0T03_21425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F0T03_21425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F0T03_21430 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F0T03_21430 PF02753 Pili assembly chaperone PapD, C-terminal domain F0T03_21435 PF00857 Isochorismatase family F0T03_21445 PF01757 Acyltransferase family F0T03_21450 PF07690 Major Facilitator Superfamily F0T03_21455 PF00009 Elongation factor Tu GTP binding domain F0T03_21455 PF03144 Elongation factor Tu domain 2 F0T03_21455 PF09106 Elongation factor SelB, winged helix F0T03_21455 PF09107 Elongation factor SelB, winged helix F0T03_21460 PF12390 Selenocysteine synthase N terminal F0T03_21460 PF03841 L-seryl-tRNA selenium transferase F0T03_21465 PF04216 Protein involved in formate dehydrogenase formation F0T03_21470 PF01292 Prokaryotic cytochrome b561 F0T03_21475 PF09163 Formate dehydrogenase N, transmembrane F0T03_21475 PF13247 4Fe-4S dicluster domain F0T03_21485 PF02634 FdhD/NarQ family F0T03_21490 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F0T03_21490 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F0T03_21495 PF02203 Tar ligand binding domain homologue F0T03_21495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_21495 PF00672 HAMP domain F0T03_21500 PF03475 3-alpha domain F0T03_21500 PF03473 MOSC domain F0T03_21505 PF10928 Protein of unknown function (DUF2810) F0T03_21510 PF00155 Aminotransferase class I and II F0T03_21510 PF00392 Bacterial regulatory proteins, gntR family F0T03_21520 PF05068 Mannitol repressor F0T03_21525 PF01232 Mannitol dehydrogenase Rossmann domain F0T03_21525 PF08125 Mannitol dehydrogenase C-terminal domain F0T03_21530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F0T03_21530 PF02378 Phosphotransferase system, EIIC F0T03_21530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F0T03_21535 PF11254 Protein of unknown function (DUF3053) F0T03_21540 PF05746 DALR anticodon binding domain F0T03_21540 PF02092 Glycyl-tRNA synthetase beta subunit F0T03_21545 PF02091 Glycyl-tRNA synthetase alpha subunit F0T03_21550 PF03352 Methyladenine glycosylase F0T03_21555 PF00583 Acetyltransferase (GNAT) family F0T03_21570 PF07690 Major Facilitator Superfamily F0T03_21575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F0T03_21575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0T03_21580 PF00128 Alpha amylase, catalytic domain F0T03_21585 PF00155 Aminotransferase class I and II F0T03_21590 PF06826 Predicted Permease Membrane Region F0T03_21590 PF02080 TrkA-C domain F0T03_21595 PF00011 Hsp20/alpha crystallin family F0T03_21600 PF00011 Hsp20/alpha crystallin family F0T03_21605 PF07119 Protein of unknown function (DUF1375) F0T03_21610 PF12566 Protein of unknown function (DUF3748) F0T03_21610 PF07676 WD40-like Beta Propeller Repeat F0T03_21615 PF08348 YheO-like PAS domain F0T03_21615 PF13309 HTH domain F0T03_21620 PF13291 ACT domain F0T03_21620 PF00291 Pyridoxal-phosphate dependent enzyme F0T03_21625 PF02423 Ornithine cyclodeaminase/mu-crystallin family F0T03_21635 PF00986 DNA gyrase B subunit, carboxyl terminus F0T03_21635 PF18053 DNA gyrase B subunit insert domain F0T03_21635 PF00204 DNA gyrase B F0T03_21635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_21635 PF01751 Toprim domain F0T03_21640 PF02463 RecF/RecN/SMC N terminal domain F0T03_21645 PF00712 DNA polymerase III beta subunit, N-terminal domain F0T03_21645 PF02768 DNA polymerase III beta subunit, C-terminal domain F0T03_21645 PF02767 DNA polymerase III beta subunit, central domain F0T03_21650 PF11638 DnaA N-terminal domain F0T03_21650 PF00308 Bacterial dnaA protein F0T03_21650 PF08299 Bacterial dnaA protein helix-turn-helix F0T03_21665 PF00468 Ribosomal protein L34 F0T03_21670 PF00825 Ribonuclease P F0T03_21675 PF01809 Putative membrane protein insertion efficiency factor F0T03_21680 PF02096 60Kd inner membrane protein F0T03_21680 PF14849 YidC periplasmic domain F0T03_21685 PF10396 GTP-binding protein TrmE N-terminus F0T03_21685 PF01926 50S ribosome-binding GTPase F0T03_21685 PF12631 MnmE helical domain F0T03_21690 PF12241 Trans-2-enoyl-CoA reductase catalytic region F0T03_21690 PF07055 Enoyl reductase FAD binding domain F0T03_21690 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase F0T03_21700 PF09383 NIL domain F0T03_21700 PF00005 ABC transporter F0T03_21705 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_21710 PF00672 HAMP domain F0T03_21710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0T03_21710 PF02203 Tar ligand binding domain homologue F0T03_21715 PF03358 NADPH-dependent FMN reductase F0T03_21720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0T03_21720 PF00512 His Kinase A (phospho-acceptor) domain F0T03_21725 PF00196 Bacterial regulatory proteins, luxR family F0T03_21725 PF00072 Response regulator receiver domain F0T03_21735 PF00860 Permease family F0T03_21740 PF13419 Haloacid dehalogenase-like hydrolase F0T03_21745 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_21750 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_21755 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0T03_21765 PF01895 PhoU domain F0T03_21770 PF00005 ABC transporter F0T03_21775 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_21780 PF00528 Binding-protein-dependent transport system inner membrane component F0T03_21785 PF12849 PBP superfamily domain F0T03_21790 PF01380 SIS domain F0T03_21795 PF00132 Bacterial transferase hexapeptide (six repeats) F0T03_21795 PF12804 MobA-like NTP transferase domain F0T03_21800 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain F0T03_21800 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F0T03_21805 PF02874 ATP synthase alpha/beta family, beta-barrel domain F0T03_21805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F0T03_21810 PF00231 ATP synthase F0T03_21815 PF00306 ATP synthase alpha/beta chain, C terminal domain F0T03_21815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F0T03_21815 PF02874 ATP synthase alpha/beta family, beta-barrel domain F0T03_21820 PF00213 ATP synthase delta (OSCP) subunit F0T03_21825 PF00430 ATP synthase B/B' CF(0) F0T03_21830 PF00137 ATP synthase subunit C F0T03_21835 PF00119 ATP synthase A chain F0T03_21840 PF03899 ATP synthase I chain F0T03_21845 PF02527 rRNA small subunit methyltransferase G F0T03_21850 PF13932 GidA associated domain F0T03_21850 PF01134 Glucose inhibited division protein A