AN401_00005 SM00382 ATPases associated with a variety of cellular activities AN401_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AN401_00010 SM00480 DNA polymerase III beta subunit AN401_00020 SM00387 Histidine kinase-like ATPases AN401_00020 SM00433 TopoisomeraseII AN401_00050 SM00836 DALR anticodon binding domain AN401_00135 SM00881 CoA binding domain AN401_00140 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_00140 SM00091 PAS domain AN401_00140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_00195 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AN401_00205 SM00346 helix_turn_helix isocitrate lyase regulation AN401_00210 SM00882 Coenzyme A transferase AN401_00215 SM00882 Coenzyme A transferase AN401_00230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_00240 SM00357 Cold shock protein domain AN401_00240 SM00955 AN401_00240 AN401_00280 SM00876 Biotin and Thiamin Synthesis associated domain AN401_00290 SM00797 Allophanate hydrolase subunit 2 AN401_00295 SM00797 Allophanate hydrolase subunit 2 AN401_00300 SM00796 Allophanate hydrolase subunit 1 AN401_00325 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_00325 SM00866 AN401_00325 AN401_00340 SM01091 Transporter associated domain AN401_00365 SM00382 ATPases associated with a variety of cellular activities AN401_00430 SM00387 Histidine kinase-like ATPases AN401_00430 SM00388 His Kinase A (phosphoacceptor) domain AN401_00435 SM00448 cheY-homologous receiver domain AN401_00435 SM00862 Transcriptional regulatory protein, C terminal AN401_00450 SM01236 AN401_00450 AN401_00480 SM00052 Putative diguanylate phosphodiesterase AN401_00480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_00480 SM00091 PAS domain AN401_00480 SM00267 diguanylate cyclase AN401_00490 SM00849 Metallo-beta-lactamase superfamily AN401_00495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_00495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_00505 SM00829 Enoylreductase AN401_00545 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_00545 SM01091 Transporter associated domain AN401_00550 SM00831 Cation transporter/ATPase, N-terminus AN401_00580 SM00354 helix_turn _helix lactose operon repressor AN401_00640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN401_00640 SM00954 Region found in RelA / SpoT proteins AN401_00645 SM01409 AN401_00645 AN401_00650 SM00072 Guanylate kinase homologues. AN401_00655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_00655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_00715 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AN401_00715 SM01232 AN401_00715 AN401_00785 SM00829 Enoylreductase AN401_00790 SM00354 helix_turn _helix lactose operon repressor AN401_00810 SM00382 ATPases associated with a variety of cellular activities AN401_00815 SM00382 ATPases associated with a variety of cellular activities AN401_00820 SM00450 Rhodanese Homology Domain AN401_00920 SM00971 Serine acetyltransferase, N-terminal AN401_00945 SM00382 ATPases associated with a variety of cellular activities AN401_00945 SM01086 C-terminal, D2-small domain, of ClpB protein AN401_00960 SM00836 DALR anticodon binding domain AN401_00960 SM01016 Arginyl tRNA synthetase N terminal dom AN401_00965 SM00464 Found in ATP-dependent protease La (LON) AN401_00970 SM00487 DEAD-like helicases superfamily AN401_00970 SM00490 helicase superfamily c-terminal domain AN401_00985 SM00919 Malic enzyme, NAD binding domain AN401_00985 SM01274 AN401_00985 AN401_01005 SM00360 RNA recognition motif AN401_01035 SM00014 Acid phosphatase homologues AN401_01070 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_01070 SM00895 AN401_01070 AN401_01105 SM00155 Phospholipase D. Active site motifs. AN401_01115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_01115 SM00387 Histidine kinase-like ATPases AN401_01115 SM00388 His Kinase A (phosphoacceptor) domain AN401_01120 SM00448 cheY-homologous receiver domain AN401_01120 SM00862 Transcriptional regulatory protein, C terminal AN401_01130 SM00344 helix_turn_helix ASNC type AN401_01140 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_01145 SM00387 Histidine kinase-like ATPases AN401_01145 SM00388 His Kinase A (phosphoacceptor) domain AN401_01155 SM00382 ATPases associated with a variety of cellular activities AN401_01155 SM00448 cheY-homologous receiver domain AN401_01175 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AN401_01175 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AN401_01175 SM00493 AN401_01175 AN401_01250 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AN401_01250 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AN401_01255 SM00649 Ribosomal protein L11/L12 AN401_01280 SM00663 RNA polymerase I subunit A N-terminus AN401_01310 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_01350 SM00382 ATPases associated with a variety of cellular activities AN401_01405 SM00487 DEAD-like helicases superfamily AN401_01405 SM00490 helicase superfamily c-terminal domain AN401_01455 SM00363 S4 RNA-binding domain AN401_01490 SM00073 Histidine Phosphotransfer domain AN401_01490 SM00091 PAS domain AN401_01490 SM00387 Histidine kinase-like ATPases AN401_01490 SM00388 His Kinase A (phosphoacceptor) domain AN401_01490 SM00448 cheY-homologous receiver domain AN401_01495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN401_01505 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AN401_01520 SM00382 ATPases associated with a variety of cellular activities AN401_01520 SM00930 AN401_01520 AN401_01540 SM00382 ATPases associated with a variety of cellular activities AN401_01545 SM00382 ATPases associated with a variety of cellular activities AN401_01580 SM00670 Large family of predicted nucleotide-binding domains AN401_01585 SM00382 ATPases associated with a variety of cellular activities AN401_01620 SM01329 AN401_01620 AN401_01625 SM00917 LeuA allosteric (dimerisation) domain AN401_01675 SM00838 Elongation factor G C-terminus AN401_01675 SM00889 Elongation factor G, domain IV AN401_01705 SM00851 MGS-like domain AN401_01730 SM01092 CO dehydrogenase flavoprotein C-terminal domain AN401_01735 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AN401_01750 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_01750 SM00895 AN401_01750 AN401_01765 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_01870 SM00481 DNA polymerase alpha chain like domain AN401_01895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_01895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_01895 SM01049 AN401_01895 AN401_01940 SM00400 zinc finger AN401_01940 SM00493 AN401_01940 AN401_01940 SM00766 DNA primase DnaG DnaB-binding AN401_01955 SM01207 AN401_01955 AN401_01960 SM00905 Dihydroneopterin aldolase AN401_01995 SM00287 Bacterial SH3 domain homologues AN401_02010 SM00880 AN401_02010 AN401_02010 SM01118 AN401_02010 AN401_02065 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN401_02090 SM01012 AN401_02090 AN401_02095 SM00382 ATPases associated with a variety of cellular activities AN401_02115 SM00387 Histidine kinase-like ATPases AN401_02115 SM00433 TopoisomeraseII AN401_02120 SM00434 DNA Topoisomerase IV AN401_02135 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AN401_02160 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_02160 SM00895 AN401_02160 AN401_02180 SM00729 Elongator protein 3, MiaB family, Radical SAM AN401_02195 SM01152 AN401_02195 AN401_02215 SM00382 ATPases associated with a variety of cellular activities AN401_02230 SM00487 DEAD-like helicases superfamily AN401_02230 SM00490 helicase superfamily c-terminal domain AN401_02265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_02265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_02270 SM00937 AN401_02270 AN401_02310 SM00344 helix_turn_helix ASNC type AN401_02325 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_02420 SM00838 Elongation factor G C-terminus AN401_02430 SM00358 Double-stranded RNA binding motif AN401_02430 SM00535 Ribonuclease III family AN401_02450 SM00073 Histidine Phosphotransfer domain AN401_02450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_02450 SM00387 Histidine kinase-like ATPases AN401_02450 SM00388 His Kinase A (phosphoacceptor) domain AN401_02450 SM00448 cheY-homologous receiver domain AN401_02460 SM00954 Region found in RelA / SpoT proteins AN401_02475 SM00671 Sel1-like repeats. AN401_02485 SM01091 Transporter associated domain AN401_02495 SM00382 ATPases associated with a variety of cellular activities AN401_02495 SM00962 SRP54-type protein, GTPase domain AN401_02495 SM00963 SRP54-type protein, helical bundle domain AN401_02525 SM00927 DNA mismatch repair enzyme MutH AN401_02535 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN401_02605 SM00953 AN401_02605 AN401_02725 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN401_02740 SM00904 Riboflavin kinase AN401_02765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN401_02765 SM00267 diguanylate cyclase AN401_02790 SM00938 Nitrogen regulatory protein P-II AN401_02800 SM00316 Ribosomal protein S1-like RNA-binding domain AN401_02800 SM00357 Cold shock protein domain AN401_02800 SM00955 AN401_02800 AN401_02805 SM00967 RNA 2'-O ribose methyltransferase substrate binding AN401_02840 SM00829 Enoylreductase AN401_02860 SM00363 S4 RNA-binding domain AN401_02870 SM00382 ATPases associated with a variety of cellular activities AN401_02870 SM01086 C-terminal, D2-small domain, of ClpB protein AN401_02925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_02925 SM00895 AN401_02925 AN401_02975 SM00487 DEAD-like helicases superfamily AN401_02975 SM00490 helicase superfamily c-terminal domain AN401_03020 SM00859 Semialdehyde dehydrogenase, NAD binding domain AN401_03095 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AN401_03095 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AN401_03120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_03140 SM00382 ATPases associated with a variety of cellular activities AN401_03150 SM00822 AN401_03150 AN401_03155 SM00342 helix_turn_helix, arabinose operon control protein AN401_03180 SM00640 Glycosyl hydrolases family 32 AN401_03185 SM00382 ATPases associated with a variety of cellular activities AN401_03205 SM01144 AN401_03205 AN401_03225 SM01133 AN401_03225 AN401_03230 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AN401_03260 SM00382 ATPases associated with a variety of cellular activities AN401_03290 SM00382 ATPases associated with a variety of cellular activities AN401_03300 SM00986 Uracil DNA glycosylase superfamily AN401_03300 SM00987 UreE urease accessory protein, C-terminal domain AN401_03315 SM00347 helix_turn_helix multiple antibiotic resistance protein AN401_03325 SM01322 AN401_03325 AN401_03370 SM00100 Cyclic nucleotide-monophosphate binding domain AN401_03370 SM00419 helix_turn_helix, cAMP Regulatory protein AN401_03425 SM00382 ATPases associated with a variety of cellular activities AN401_03450 SM00320 WD40 repeats AN401_03480 SM00883 Chaperonin 10 Kd subunit AN401_03495 SM00052 Putative diguanylate phosphodiesterase AN401_03495 SM00267 diguanylate cyclase AN401_03510 SM00841 Elongation factor P, C-terminal AN401_03510 SM01185 AN401_03510 AN401_03515 SM01240 AN401_03515 AN401_03565 SM00479 AN401_03565 AN401_03605 SM00257 Lysin motif AN401_03605 SM00646 AN401_03605 AN401_03610 SM00853 MutL C terminal dimerisation domain AN401_03610 SM01340 AN401_03610 AN401_03630 SM00244 prohibitin homologues AN401_03635 SM00244 prohibitin homologues AN401_03640 SM00788 Adenylosuccinate synthetase AN401_03680 SM00650 Ribosomal RNA adenine dimethylases AN401_03700 SM00271 DnaJ molecular chaperone homology domain AN401_03720 SM00487 DEAD-like helicases superfamily AN401_03720 SM00490 helicase superfamily c-terminal domain AN401_03810 SM00771 ZipA, C-terminal domain (FtsZ-binding) AN401_03815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN401_03815 SM00292 breast cancer carboxy-terminal domain AN401_03815 SM00532 Ligase N family AN401_03860 SM00382 ATPases associated with a variety of cellular activities AN401_03870 SM00052 Putative diguanylate phosphodiesterase AN401_03870 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_03870 SM00267 diguanylate cyclase AN401_03870 SM01079 AN401_03870 AN401_03925 SM00419 helix_turn_helix, cAMP Regulatory protein AN401_03995 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_03995 SM00091 PAS domain AN401_03995 SM00267 diguanylate cyclase AN401_04070 SM00878 Biotin carboxylase C-terminal domain AN401_04090 SM00479 AN401_04090 AN401_04095 SM00100 Cyclic nucleotide-monophosphate binding domain AN401_04095 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_04165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_04165 SM00331 Sigma factor PP2C-like phosphatases AN401_04180 SM00267 diguanylate cyclase AN401_04235 SM00382 ATPases associated with a variety of cellular activities AN401_04255 SM00838 Elongation factor G C-terminus AN401_04255 SM00889 Elongation factor G, domain IV AN401_04275 SM00463 Small MutS-related domain AN401_04325 SM00858 AN401_04325 AN401_04330 SM00260 Two component signalling adaptor domain AN401_04330 SM00448 cheY-homologous receiver domain AN401_04335 SM00138 Methyltransferase, chemotaxis proteins AN401_04380 SM00047 Lysozyme subfamily 2 AN401_04420 SM00382 ATPases associated with a variety of cellular activities AN401_04425 SM00091 PAS domain AN401_04425 SM00387 Histidine kinase-like ATPases AN401_04425 SM00388 His Kinase A (phosphoacceptor) domain AN401_04430 SM00382 ATPases associated with a variety of cellular activities AN401_04430 SM00448 cheY-homologous receiver domain AN401_04455 SM00382 ATPases associated with a variety of cellular activities AN401_04515 SM00382 ATPases associated with a variety of cellular activities AN401_04515 SM00962 SRP54-type protein, GTPase domain AN401_04530 SM00448 cheY-homologous receiver domain AN401_04540 SM00073 Histidine Phosphotransfer domain AN401_04540 SM00260 Two component signalling adaptor domain AN401_04540 SM00387 Histidine kinase-like ATPases AN401_04540 SM01231 AN401_04540 AN401_04545 SM00448 cheY-homologous receiver domain AN401_04565 SM00260 Two component signalling adaptor domain AN401_04570 SM00260 Two component signalling adaptor domain AN401_04580 SM00382 ATPases associated with a variety of cellular activities AN401_04630 SM00530 Helix-turn-helix XRE-family like proteins AN401_04640 SM00487 DEAD-like helicases superfamily AN401_04640 SM00490 helicase superfamily c-terminal domain AN401_04710 SM00487 DEAD-like helicases superfamily AN401_04710 SM00490 helicase superfamily c-terminal domain AN401_04720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN401_04725 SM00354 helix_turn _helix lactose operon repressor AN401_04735 SM00642 Alpha-amylase domain AN401_04750 SM00357 Cold shock protein domain AN401_04765 SM00316 Ribosomal protein S1-like RNA-binding domain AN401_04795 SM00344 helix_turn_helix ASNC type AN401_04800 SM00843 AN401_04800 AN401_04810 SM00382 ATPases associated with a variety of cellular activities AN401_04860 SM00052 Putative diguanylate phosphodiesterase AN401_04860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_04860 SM00091 PAS domain AN401_04860 SM00267 diguanylate cyclase AN401_04885 SM00382 ATPases associated with a variety of cellular activities AN401_04945 SM00271 DnaJ molecular chaperone homology domain AN401_04960 SM01103 AN401_04960 AN401_04970 SM00382 ATPases associated with a variety of cellular activities AN401_05005 SM00316 Ribosomal protein S1-like RNA-binding domain AN401_05025 SM01387 AN401_05025 AN401_05035 SM00316 Ribosomal protein S1-like RNA-binding domain AN401_05035 SM00322 K homology RNA-binding domain AN401_05050 SM00387 Histidine kinase-like ATPases AN401_05050 SM00388 His Kinase A (phosphoacceptor) domain AN401_05055 SM00448 cheY-homologous receiver domain AN401_05055 SM00862 Transcriptional regulatory protein, C terminal AN401_05065 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AN401_05075 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AN401_05090 SM00422 helix_turn_helix, mercury resistance AN401_05140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN401_05165 SM00530 Helix-turn-helix XRE-family like proteins AN401_05190 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AN401_05195 SM00851 MGS-like domain AN401_05195 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AN401_05200 SM00357 Cold shock protein domain AN401_05205 SM00732 Likely ribonuclease with RNase H fold. AN401_05235 SM00731 SprT homologues. AN401_05245 SM00861 Transketolase, pyrimidine binding domain AN401_05255 SM00448 cheY-homologous receiver domain AN401_05255 SM00862 Transcriptional regulatory protein, C terminal AN401_05265 SM00052 Putative diguanylate phosphodiesterase AN401_05265 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_05265 SM00091 PAS domain AN401_05265 SM00267 diguanylate cyclase AN401_05290 SM01130 AN401_05290 AN401_05300 SM00486 DNA polymerase type-B family AN401_05325 SM00267 diguanylate cyclase AN401_05330 SM00919 Malic enzyme, NAD binding domain AN401_05330 SM01274 AN401_05330 AN401_05355 SM00382 ATPases associated with a variety of cellular activities AN401_05360 SM00382 ATPases associated with a variety of cellular activities AN401_05375 SM00382 ATPases associated with a variety of cellular activities AN401_05375 SM00994 ClpX C4-type zinc finger AN401_05375 SM01086 C-terminal, D2-small domain, of ClpB protein AN401_05380 SM00382 ATPases associated with a variety of cellular activities AN401_05380 SM00464 Found in ATP-dependent protease La (LON) AN401_05385 SM00411 bacterial (prokaryotic) histone like domain AN401_05395 SM00421 helix_turn_helix, Lux Regulon AN401_05395 SM00448 cheY-homologous receiver domain AN401_05400 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN401_05400 SM00465 GIY-YIG type nucleases (URI domain) AN401_05430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_05435 SM00382 ATPases associated with a variety of cellular activities AN401_05460 SM00382 ATPases associated with a variety of cellular activities AN401_05475 SM00062 Bacterial periplasmic substrate-binding proteins AN401_05480 SM00052 Putative diguanylate phosphodiesterase AN401_05480 SM00267 diguanylate cyclase AN401_05490 SM00382 ATPases associated with a variety of cellular activities AN401_05515 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_05515 SM00866 AN401_05515 AN401_05555 SM00450 Rhodanese Homology Domain AN401_05575 SM00342 helix_turn_helix, arabinose operon control protein AN401_05585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_05585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_05635 SM00344 helix_turn_helix ASNC type AN401_05675 SM00052 Putative diguanylate phosphodiesterase AN401_05675 SM00267 diguanylate cyclase AN401_05680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_05680 SM00895 AN401_05680 AN401_05730 SM00988 UreE urease accessory protein, N-terminal domain AN401_05760 SM00448 cheY-homologous receiver domain AN401_05760 SM00850 LytTr DNA-binding domain AN401_05810 SM00858 AN401_05810 AN401_05860 SM00028 Tetratricopeptide repeats AN401_05905 SM00986 Uracil DNA glycosylase superfamily AN401_05905 SM00987 UreE urease accessory protein, C-terminal domain AN401_05930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_05930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_05945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_05980 SM00487 DEAD-like helicases superfamily AN401_05980 SM00490 helicase superfamily c-terminal domain AN401_05985 SM00487 DEAD-like helicases superfamily AN401_05985 SM00490 helicase superfamily c-terminal domain AN401_06035 SM00481 DNA polymerase alpha chain like domain AN401_06045 SM00363 S4 RNA-binding domain AN401_06100 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN401_06105 SM00382 ATPases associated with a variety of cellular activities AN401_06140 SM00028 Tetratricopeptide repeats AN401_06220 SM00448 cheY-homologous receiver domain AN401_06220 SM00862 Transcriptional regulatory protein, C terminal AN401_06225 SM00091 PAS domain AN401_06225 SM00387 Histidine kinase-like ATPases AN401_06225 SM00388 His Kinase A (phosphoacceptor) domain AN401_06245 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AN401_06295 SM00382 ATPases associated with a variety of cellular activities AN401_06350 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AN401_06380 SM00421 helix_turn_helix, Lux Regulon AN401_06390 SM00382 ATPases associated with a variety of cellular activities AN401_06400 SM01043 Bacterial transcriptional activator domain AN401_06410 SM00854 Bacterial capsule synthesis protein PGA_cap AN401_06415 SM00382 ATPases associated with a variety of cellular activities AN401_06440 SM00052 Putative diguanylate phosphodiesterase AN401_06440 SM00267 diguanylate cyclase AN401_06440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_06485 SM00382 ATPases associated with a variety of cellular activities AN401_06515 SM00887 Ethylbenzene dehydrogenase AN401_06580 SM00448 cheY-homologous receiver domain AN401_06585 SM00091 PAS domain AN401_06585 SM00387 Histidine kinase-like ATPases AN401_06600 SM00382 ATPases associated with a variety of cellular activities AN401_06610 SM00448 cheY-homologous receiver domain AN401_06620 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN401_06650 SM00354 helix_turn _helix lactose operon repressor AN401_06660 SM00382 ATPases associated with a variety of cellular activities AN401_06690 SM00342 helix_turn_helix, arabinose operon control protein AN401_06775 SM00354 helix_turn _helix lactose operon repressor AN401_06795 SM00382 ATPases associated with a variety of cellular activities AN401_06805 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_06805 SM00091 PAS domain AN401_06805 SM00267 diguanylate cyclase AN401_06815 SM00382 ATPases associated with a variety of cellular activities AN401_06820 SM00382 ATPases associated with a variety of cellular activities AN401_06840 SM00382 ATPases associated with a variety of cellular activities AN401_06905 SM00840 AN401_06905 AN401_06940 SM00091 PAS domain AN401_06940 SM00382 ATPases associated with a variety of cellular activities AN401_06950 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_06995 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AN401_07000 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN401_07000 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AN401_07105 SM00382 ATPases associated with a variety of cellular activities AN401_07140 SM00530 Helix-turn-helix XRE-family like proteins AN401_07285 SM00327 von Willebrand factor (vWF) type A domain AN401_07330 SM01321 AN401_07330 AN401_07345 SM00342 helix_turn_helix, arabinose operon control protein AN401_07355 SM00989 AN401_07355 AN401_07375 SM00893 Electron transfer flavoprotein domain AN401_07390 SM00382 ATPases associated with a variety of cellular activities AN401_07440 SM00091 PAS domain AN401_07440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_07470 SM00382 ATPases associated with a variety of cellular activities AN401_07485 SM00479 AN401_07485 AN401_07530 SM00855 Phosphoglycerate mutase family AN401_07540 SM00463 Small MutS-related domain AN401_07585 SM00448 cheY-homologous receiver domain AN401_07585 SM00862 Transcriptional regulatory protein, C terminal AN401_07630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_07630 SM00387 Histidine kinase-like ATPases AN401_07630 SM00388 His Kinase A (phosphoacceptor) domain AN401_07710 SM00052 Putative diguanylate phosphodiesterase AN401_07710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN401_07720 SM00354 helix_turn _helix lactose operon repressor AN401_07740 SM00822 AN401_07740 AN401_07755 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_07755 SM00895 AN401_07755 AN401_07760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_07760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_07780 SM01329 AN401_07780 AN401_07790 SM01007 Class II Aldolase and Adducin N-terminal domain AN401_07855 SM01130 AN401_07855 AN401_07885 SM00354 helix_turn _helix lactose operon repressor AN401_07920 SM00344 helix_turn_helix ASNC type AN401_07970 SM00420 helix_turn_helix, Deoxyribose operon repressor AN401_07970 SM01134 AN401_07970 AN401_07985 SM00382 ATPases associated with a variety of cellular activities AN401_08025 SM00861 Transketolase, pyrimidine binding domain AN401_08030 SM00420 helix_turn_helix, Deoxyribose operon repressor AN401_08030 SM01134 AN401_08030 AN401_08040 SM01120 AN401_08040 AN401_08060 SM00895 AN401_08060 AN401_08070 SM00861 Transketolase, pyrimidine binding domain AN401_08125 SM00382 ATPases associated with a variety of cellular activities AN401_08135 SM00493 AN401_08135 AN401_08170 SM00357 Cold shock protein domain AN401_08225 SM00421 helix_turn_helix, Lux Regulon AN401_08230 SM00382 ATPases associated with a variety of cellular activities AN401_08230 SM00487 DEAD-like helicases superfamily AN401_08230 SM00490 helicase superfamily c-terminal domain AN401_08230 SM00847 Helicase associated domain (HA2) Add an annotation AN401_08245 SM00342 helix_turn_helix, arabinose operon control protein AN401_08280 SM00822 AN401_08280 AN401_08345 SM00422 helix_turn_helix, mercury resistance AN401_08430 SM00382 ATPases associated with a variety of cellular activities AN401_08435 SM00990 AN401_08435 AN401_08460 SM00052 Putative diguanylate phosphodiesterase AN401_08460 SM00062 Bacterial periplasmic substrate-binding proteins AN401_08460 SM00091 PAS domain AN401_08460 SM00267 diguanylate cyclase AN401_08465 SM00073 Histidine Phosphotransfer domain AN401_08465 SM00387 Histidine kinase-like ATPases AN401_08465 SM00388 His Kinase A (phosphoacceptor) domain AN401_08465 SM00448 cheY-homologous receiver domain AN401_08470 SM00448 cheY-homologous receiver domain AN401_08470 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AN401_08485 SM00052 Putative diguanylate phosphodiesterase AN401_08485 SM00091 PAS domain AN401_08485 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_08485 SM00267 diguanylate cyclase AN401_08510 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AN401_08555 SM00382 ATPases associated with a variety of cellular activities AN401_08585 SM00938 Nitrogen regulatory protein P-II AN401_08650 SM00387 Histidine kinase-like ATPases AN401_08650 SM00388 His Kinase A (phosphoacceptor) domain AN401_08650 SM00448 cheY-homologous receiver domain AN401_08675 SM00052 Putative diguanylate phosphodiesterase AN401_08675 SM00091 PAS domain AN401_08675 SM00267 diguanylate cyclase AN401_08685 SM00420 helix_turn_helix, Deoxyribose operon repressor AN401_08685 SM01134 AN401_08685 AN401_08700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_08700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_08720 SM00849 Metallo-beta-lactamase superfamily AN401_08755 SM00450 Rhodanese Homology Domain AN401_08765 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AN401_08775 SM00530 Helix-turn-helix XRE-family like proteins AN401_08815 SM00448 cheY-homologous receiver domain AN401_08815 SM00862 Transcriptional regulatory protein, C terminal AN401_08820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_08820 SM00387 Histidine kinase-like ATPases AN401_08820 SM00388 His Kinase A (phosphoacceptor) domain AN401_08840 SM00382 ATPases associated with a variety of cellular activities AN401_08870 SM00226 Low molecular weight phosphatase family AN401_08875 SM00316 Ribosomal protein S1-like RNA-binding domain AN401_08880 SM00363 S4 RNA-binding domain AN401_08910 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AN401_08915 SM00822 AN401_08915 AN401_08925 SM00825 Beta-ketoacyl synthase AN401_08960 SM00244 prohibitin homologues AN401_08970 SM00382 ATPases associated with a variety of cellular activities AN401_08980 SM00945 ProQ/FINO family AN401_08985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN401_08985 SM00245 tail specific protease AN401_09035 SM00981 AN401_09035 AN401_09045 SM00382 ATPases associated with a variety of cellular activities AN401_09060 SM00014 Acid phosphatase homologues AN401_09075 SM00854 Bacterial capsule synthesis protein PGA_cap AN401_09110 SM00487 DEAD-like helicases superfamily AN401_09135 SM00563 Phosphate acyltransferases AN401_09180 SM00861 Transketolase, pyrimidine binding domain AN401_09185 SM00829 Enoylreductase AN401_09195 SM00382 ATPases associated with a variety of cellular activities AN401_09245 SM00100 Cyclic nucleotide-monophosphate binding domain AN401_09245 SM00419 helix_turn_helix, cAMP Regulatory protein AN401_09270 SM00382 ATPases associated with a variety of cellular activities AN401_09295 SM00411 bacterial (prokaryotic) histone like domain AN401_09300 SM00873 B3/4 domain AN401_09300 SM00874 tRNA synthetase B5 domain AN401_09300 SM00896 Ferredoxin-fold anticodon binding domain AN401_09325 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AN401_09390 SM00763 PrkA AAA domain AN401_09405 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_09405 SM00895 AN401_09405 AN401_09445 SM00341 Helicase and RNase D C-terminal AN401_09445 SM00474 3'-5' exonuclease AN401_09460 SM00491 AN401_09460 AN401_09465 SM00342 helix_turn_helix, arabinose operon control protein AN401_09480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_09480 SM00091 PAS domain AN401_09480 SM00267 diguanylate cyclase AN401_09505 SM00100 Cyclic nucleotide-monophosphate binding domain AN401_09505 SM00419 helix_turn_helix, cAMP Regulatory protein AN401_09580 SM00448 cheY-homologous receiver domain AN401_09585 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN401_09585 SM00091 PAS domain AN401_09585 SM00267 diguanylate cyclase AN401_09610 SM00342 helix_turn_helix, arabinose operon control protein AN401_09665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_09665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_09745 SM00900 AN401_09745 AN401_09755 SM00478 endonuclease III AN401_09755 SM00525 AN401_09755 AN401_09770 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_09810 SM00382 ATPases associated with a variety of cellular activities AN401_09840 SM00491 AN401_09840 AN401_09900 SM00387 Histidine kinase-like ATPases AN401_09935 SM00052 Putative diguanylate phosphodiesterase AN401_09950 SM00528 Domain in histone-like proteins of HNS family AN401_09960 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AN401_09965 SM00028 Tetratricopeptide repeats AN401_09975 SM00411 bacterial (prokaryotic) histone like domain AN401_09980 SM00316 Ribosomal protein S1-like RNA-binding domain AN401_10005 SM00861 Transketolase, pyrimidine binding domain AN401_10085 SM00354 helix_turn _helix lactose operon repressor AN401_10120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_10120 SM00387 Histidine kinase-like ATPases AN401_10135 SM00729 Elongator protein 3, MiaB family, Radical SAM AN401_10170 SM00563 Phosphate acyltransferases AN401_10185 SM00867 YceI-like domain AN401_10200 SM00852 Probable molybdopterin binding domain AN401_10265 SM00382 ATPases associated with a variety of cellular activities AN401_10280 SM00421 helix_turn_helix, Lux Regulon AN401_10305 SM00382 ATPases associated with a variety of cellular activities AN401_10310 SM00642 Alpha-amylase domain AN401_10320 SM00354 helix_turn _helix lactose operon repressor AN401_10340 SM00642 Alpha-amylase domain AN401_10345 SM00642 Alpha-amylase domain AN401_10350 SM00382 ATPases associated with a variety of cellular activities AN401_10395 SM00460 Transglutaminase/protease-like homologues AN401_10405 SM00460 Transglutaminase/protease-like homologues AN401_10420 SM00450 Rhodanese Homology Domain AN401_10425 SM01091 Transporter associated domain AN401_10430 SM00506 Appr-1"-p processing enzyme AN401_10490 SM00342 helix_turn_helix, arabinose operon control protein AN401_10495 SM00344 helix_turn_helix ASNC type AN401_10525 SM01001 AIR carboxylase AN401_10530 SM00062 Bacterial periplasmic substrate-binding proteins AN401_10540 SM00052 Putative diguanylate phosphodiesterase AN401_10540 SM00267 diguanylate cyclase AN401_10540 SM00448 cheY-homologous receiver domain AN401_10570 SM00342 helix_turn_helix, arabinose operon control protein AN401_10580 SM00342 helix_turn_helix, arabinose operon control protein AN401_10635 SM00870 AN401_10635 AN401_10665 SM00382 ATPases associated with a variety of cellular activities AN401_10785 SM00342 helix_turn_helix, arabinose operon control protein AN401_10850 SM00382 ATPases associated with a variety of cellular activities AN401_10865 SM00487 DEAD-like helicases superfamily AN401_10865 SM00490 helicase superfamily c-terminal domain AN401_10920 SM00014 Acid phosphatase homologues AN401_10925 SM00825 Beta-ketoacyl synthase AN401_10960 SM00487 DEAD-like helicases superfamily AN401_10960 SM00490 helicase superfamily c-terminal domain AN401_11180 SM00530 Helix-turn-helix XRE-family like proteins AN401_11245 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AN401_11245 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AN401_11250 SM00530 Helix-turn-helix XRE-family like proteins AN401_11255 SM00530 Helix-turn-helix XRE-family like proteins AN401_11270 SM00382 ATPases associated with a variety of cellular activities AN401_11285 SM01230 AN401_11285 AN401_11290 SM01230 AN401_11290 AN401_11325 SM00852 Probable molybdopterin binding domain AN401_11350 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN401_11365 SM00729 Elongator protein 3, MiaB family, Radical SAM AN401_11370 SM00421 helix_turn_helix, Lux Regulon AN401_11370 SM00448 cheY-homologous receiver domain AN401_11380 SM00382 ATPases associated with a variety of cellular activities AN401_11380 SM00448 cheY-homologous receiver domain AN401_11410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_11410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_11420 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AN401_11420 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AN401_11420 SM00493 AN401_11420 AN401_11520 SM00257 Lysin motif AN401_11555 SM00530 Helix-turn-helix XRE-family like proteins AN401_11810 SM00858 AN401_11810 AN401_11830 SM00267 diguanylate cyclase AN401_11870 SM00822 AN401_11870 AN401_11895 SM00052 Putative diguanylate phosphodiesterase AN401_11895 SM00267 diguanylate cyclase AN401_11905 SM00422 helix_turn_helix, mercury resistance AN401_11925 SM00434 DNA Topoisomerase IV AN401_12015 SM00857 Resolvase, N terminal domain AN401_12065 SM00382 ATPases associated with a variety of cellular activities AN401_12100 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_12100 SM01240 AN401_12100 AN401_12110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_12110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_12120 SM00881 CoA binding domain AN401_12135 SM00861 Transketolase, pyrimidine binding domain AN401_12190 SM00382 ATPases associated with a variety of cellular activities AN401_12195 SM00849 Metallo-beta-lactamase superfamily AN401_12215 SM00382 ATPases associated with a variety of cellular activities AN401_12230 SM00487 DEAD-like helicases superfamily AN401_12230 SM00490 helicase superfamily c-terminal domain AN401_12230 SM00982 AN401_12230 AN401_12230 SM01058 CarD-like/TRCF domain AN401_12260 SM00487 DEAD-like helicases superfamily AN401_12260 SM00490 helicase superfamily c-terminal domain AN401_12265 SM01005 Alanine racemase, C-terminal domain AN401_12315 SM00354 helix_turn _helix lactose operon repressor AN401_12320 SM00640 Glycosyl hydrolases family 32 AN401_12340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_12340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_12340 SM01358 AN401_12340 AN401_12375 SM00382 ATPases associated with a variety of cellular activities AN401_12380 SM00382 ATPases associated with a variety of cellular activities AN401_12405 SM00855 Phosphoglycerate mutase family AN401_12470 SM00729 Elongator protein 3, MiaB family, Radical SAM AN401_12470 SM00876 Biotin and Thiamin Synthesis associated domain AN401_12550 SM01321 AN401_12550 AN401_12650 SM00448 cheY-homologous receiver domain AN401_12650 SM00862 Transcriptional regulatory protein, C terminal AN401_12660 SM00052 Putative diguanylate phosphodiesterase AN401_12660 SM00267 diguanylate cyclase AN401_12660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_12665 SM00849 Metallo-beta-lactamase superfamily AN401_12665 SM01027 Beta-Casp domain AN401_12780 SM00977 TilS substrate C-terminal domain AN401_12785 SM00267 diguanylate cyclase AN401_12795 SM00481 DNA polymerase alpha chain like domain AN401_12825 SM00935 Outer membrane protein (OmpH-like) AN401_12835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN401_12880 SM01329 AN401_12880 AN401_12910 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AN401_12945 SM00487 DEAD-like helicases superfamily AN401_12945 SM00490 helicase superfamily c-terminal domain AN401_12960 SM00421 helix_turn_helix, Lux Regulon AN401_12970 SM00363 S4 RNA-binding domain AN401_12990 SM00448 cheY-homologous receiver domain AN401_12995 SM00267 diguanylate cyclase AN401_13015 SM00487 DEAD-like helicases superfamily AN401_13015 SM00490 helicase superfamily c-terminal domain AN401_13035 SM00155 Phospholipase D. Active site motifs. AN401_13045 SM00052 Putative diguanylate phosphodiesterase AN401_13045 SM00091 PAS domain AN401_13045 SM00267 diguanylate cyclase AN401_13050 SM01211 AN401_13050 AN401_13055 SM00062 Bacterial periplasmic substrate-binding proteins AN401_13065 SM00382 ATPases associated with a variety of cellular activities AN401_13070 SM00564 beta-propeller repeat AN401_13095 SM00028 Tetratricopeptide repeats AN401_13105 SM00562 AN401_13105 AN401_13135 SM00271 DnaJ molecular chaperone homology domain AN401_13180 SM00028 Tetratricopeptide repeats AN401_13195 SM01323 AN401_13195 AN401_13210 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_13220 SM00220 Serine/Threonine protein kinases, catalytic domain AN401_13230 SM00861 Transketolase, pyrimidine binding domain AN401_13240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_13240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_13390 SM00382 ATPases associated with a variety of cellular activities AN401_13410 SM00342 helix_turn_helix, arabinose operon control protein AN401_13410 SM00871 Bacterial transcription activator, effector binding domain AN401_13425 SM00382 ATPases associated with a variety of cellular activities AN401_13440 SM00244 prohibitin homologues AN401_13450 SM00062 Bacterial periplasmic substrate-binding proteins AN401_13450 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AN401_13460 SM00382 ATPases associated with a variety of cellular activities AN401_13470 SM00344 helix_turn_helix ASNC type AN401_13490 SM00937 AN401_13490 AN401_13510 SM01400 AN401_13510 AN401_13565 SM00729 Elongator protein 3, MiaB family, Radical SAM AN401_13580 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_13580 SM01091 Transporter associated domain AN401_13645 SM00936 Penicillin-binding protein 5, C-terminal domain AN401_13660 SM00729 Elongator protein 3, MiaB family, Radical SAM AN401_13715 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AN401_13735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_13735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_13735 SM01049 AN401_13735 AN401_13780 SM00900 AN401_13780 AN401_13840 SM00981 AN401_13840 AN401_13865 SM00861 Transketolase, pyrimidine binding domain AN401_13920 SM00062 Bacterial periplasmic substrate-binding proteins AN401_13920 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AN401_13925 SM00382 ATPases associated with a variety of cellular activities AN401_13950 SM00859 Semialdehyde dehydrogenase, NAD binding domain AN401_13985 SM00387 Histidine kinase-like ATPases AN401_13985 SM00388 His Kinase A (phosphoacceptor) domain AN401_13990 SM00382 ATPases associated with a variety of cellular activities AN401_13990 SM00448 cheY-homologous receiver domain AN401_14010 SM00421 helix_turn_helix, Lux Regulon AN401_14010 SM00448 cheY-homologous receiver domain AN401_14015 SM00387 Histidine kinase-like ATPases AN401_14015 SM00388 His Kinase A (phosphoacceptor) domain AN401_14015 SM00448 cheY-homologous receiver domain AN401_14035 SM00052 Putative diguanylate phosphodiesterase AN401_14035 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_14035 SM00267 diguanylate cyclase AN401_14095 SM00028 Tetratricopeptide repeats AN401_14100 SM00267 diguanylate cyclase AN401_14110 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AN401_14110 SM00475 5'-3' exonuclease AN401_14115 SM01329 AN401_14115 AN401_14155 SM00479 AN401_14155 AN401_14160 SM00100 Cyclic nucleotide-monophosphate binding domain AN401_14160 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_14215 SM00487 DEAD-like helicases superfamily AN401_14220 SM00952 AN401_14220 AN401_14235 SM00479 AN401_14235 AN401_14250 SM00849 Metallo-beta-lactamase superfamily AN401_14255 SM00257 Lysin motif AN401_14285 SM00830 Chorismate mutase type II AN401_14290 SM00830 Chorismate mutase type II AN401_14310 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_14375 SM00822 AN401_14375 AN401_14425 SM00346 helix_turn_helix isocitrate lyase regulation AN401_14440 SM00382 ATPases associated with a variety of cellular activities AN401_14490 SM00893 Electron transfer flavoprotein domain AN401_14495 SM00893 Electron transfer flavoprotein domain AN401_14545 SM00903 Flavin reductase like domain AN401_14565 SM00342 helix_turn_helix, arabinose operon control protein AN401_14620 SM00859 Semialdehyde dehydrogenase, NAD binding domain AN401_14640 SM00342 helix_turn_helix, arabinose operon control protein AN401_14665 SM00052 Putative diguanylate phosphodiesterase AN401_14665 SM00267 diguanylate cyclase AN401_14805 SM00382 ATPases associated with a variety of cellular activities AN401_14830 SM00382 ATPases associated with a variety of cellular activities AN401_14930 SM00422 helix_turn_helix, mercury resistance AN401_14975 SM00422 helix_turn_helix, mercury resistance AN401_14980 SM00798 AICARFT/IMPCHase bienzyme AN401_14980 SM00851 MGS-like domain AN401_14985 SM01209 AN401_14985 AN401_14985 SM01210 AN401_14985 AN401_15000 SM00411 bacterial (prokaryotic) histone like domain AN401_15010 SM01150 AN401_15010 AN401_15050 SM00448 cheY-homologous receiver domain AN401_15060 SM00138 Methyltransferase, chemotaxis proteins AN401_15065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_15065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_15070 SM00260 Two component signalling adaptor domain AN401_15075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_15080 SM00073 Histidine Phosphotransfer domain AN401_15080 SM00260 Two component signalling adaptor domain AN401_15080 SM00387 Histidine kinase-like ATPases AN401_15080 SM01231 AN401_15080 AN401_15090 SM00448 cheY-homologous receiver domain AN401_15095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_15100 SM00062 Bacterial periplasmic substrate-binding proteins AN401_15150 SM00530 Helix-turn-helix XRE-family like proteins AN401_15160 SM01230 AN401_15160 AN401_15170 SM00450 Rhodanese Homology Domain AN401_15190 SM00387 Histidine kinase-like ATPases AN401_15190 SM00388 His Kinase A (phosphoacceptor) domain AN401_15195 SM00382 ATPases associated with a variety of cellular activities AN401_15195 SM00448 cheY-homologous receiver domain AN401_15200 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AN401_15215 SM00344 helix_turn_helix ASNC type AN401_15220 SM00382 ATPases associated with a variety of cellular activities AN401_15225 SM00382 ATPases associated with a variety of cellular activities AN401_15260 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_15260 SM00895 AN401_15260 AN401_15270 SM00344 helix_turn_helix ASNC type AN401_15280 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN401_15280 SM00267 diguanylate cyclase AN401_15300 SM00342 helix_turn_helix, arabinose operon control protein AN401_15330 SM00354 helix_turn _helix lactose operon repressor AN401_15350 SM00382 ATPases associated with a variety of cellular activities AN401_15385 SM00831 Cation transporter/ATPase, N-terminus AN401_15395 SM00382 ATPases associated with a variety of cellular activities AN401_15400 SM00347 helix_turn_helix multiple antibiotic resistance protein AN401_15470 SM00965 Secretin and TonB N terminus short domain AN401_15490 SM00842 Cell division protein FtsA AN401_15575 SM01005 Alanine racemase, C-terminal domain AN401_15580 SM00382 ATPases associated with a variety of cellular activities AN401_15585 SM00978 AN401_15585 AN401_15590 SM00052 Putative diguanylate phosphodiesterase AN401_15590 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_15590 SM00091 PAS domain AN401_15590 SM00267 diguanylate cyclase AN401_15635 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AN401_15645 SM00382 ATPases associated with a variety of cellular activities AN401_15655 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AN401_15655 SM00534 ATPase domain of DNA mismatch repair MUTS family AN401_15665 SM00257 Lysin motif AN401_15705 SM01192 AN401_15705 AN401_15705 SM01193 AN401_15705 AN401_15715 SM00893 Electron transfer flavoprotein domain AN401_15720 SM00893 Electron transfer flavoprotein domain AN401_15730 SM00822 AN401_15730 AN401_15780 SM00878 Biotin carboxylase C-terminal domain AN401_15820 SM00354 helix_turn _helix lactose operon repressor AN401_15845 SM00062 Bacterial periplasmic substrate-binding proteins AN401_15845 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AN401_15850 SM00382 ATPases associated with a variety of cellular activities AN401_15865 SM00382 ATPases associated with a variety of cellular activities AN401_15885 SM00938 Nitrogen regulatory protein P-II AN401_15915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_15915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_15915 SM01358 AN401_15915 AN401_15935 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_15935 SM00895 AN401_15935 AN401_15940 SM00644 AN401_15940 AN401_15990 SM00478 endonuclease III AN401_15990 SM00525 AN401_15990 AN401_16020 SM00267 diguanylate cyclase AN401_16020 SM01079 AN401_16020 AN401_16025 SM00357 Cold shock protein domain AN401_16045 SM01130 AN401_16045 AN401_16140 SM00198 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. AN401_16145 SM00342 helix_turn_helix, arabinose operon control protein AN401_16155 SM00870 AN401_16155 AN401_16165 SM00530 Helix-turn-helix XRE-family like proteins AN401_16190 SM00563 Phosphate acyltransferases AN401_16195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_16200 SM00957 SecA DEAD-like domain AN401_16200 SM00958 SecA preprotein cross-linking domain AN401_16215 SM00864 Tubulin/FtsZ family, GTPase domain AN401_16215 SM00865 Tubulin/FtsZ family, C-terminal domain AN401_16220 SM00842 Cell division protein FtsA AN401_16230 SM01209 AN401_16230 AN401_16310 SM00749 bacterial OsmY and nodulation domain AN401_16355 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN401_16360 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN401_16395 SM00382 ATPases associated with a variety of cellular activities AN401_16400 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_16420 SM00382 ATPases associated with a variety of cellular activities AN401_16450 SM00116 Domain in cystathionine beta-synthase and other proteins. AN401_16450 SM00924 MgtE intracellular N domain AN401_16485 SM00316 Ribosomal protein S1-like RNA-binding domain AN401_16515 SM00052 Putative diguanylate phosphodiesterase AN401_16515 SM00267 diguanylate cyclase AN401_16550 SM00382 ATPases associated with a variety of cellular activities AN401_16560 SM00028 Tetratricopeptide repeats AN401_16575 SM00382 ATPases associated with a variety of cellular activities AN401_16585 SM00782 PhnA Zinc-Ribbon AN401_16600 SM01018 B12 binding domain AN401_16615 SM00852 Probable molybdopterin binding domain AN401_16620 SM00014 Acid phosphatase homologues AN401_16700 SM00257 Lysin motif AN401_16750 SM00841 Elongation factor P, C-terminal AN401_16750 SM01185 AN401_16750 AN401_16755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_16755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_16755 SM01049 AN401_16755 AN401_16805 SM00881 CoA binding domain AN401_16815 SM01230 AN401_16815 AN401_16835 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_16845 SM00530 Helix-turn-helix XRE-family like proteins AN401_16865 SM00052 Putative diguanylate phosphodiesterase AN401_16865 SM00267 diguanylate cyclase AN401_16875 SM00387 Histidine kinase-like ATPases AN401_16875 SM00388 His Kinase A (phosphoacceptor) domain AN401_16880 SM00382 ATPases associated with a variety of cellular activities AN401_16880 SM00448 cheY-homologous receiver domain AN401_16905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_16905 SM00387 Histidine kinase-like ATPases AN401_16910 SM00382 ATPases associated with a variety of cellular activities AN401_16910 SM00448 cheY-homologous receiver domain AN401_16925 SM00382 ATPases associated with a variety of cellular activities AN401_16940 SM00855 Phosphoglycerate mutase family AN401_16970 SM00062 Bacterial periplasmic substrate-binding proteins AN401_16970 SM00387 Histidine kinase-like ATPases AN401_16970 SM00388 His Kinase A (phosphoacceptor) domain AN401_16975 SM00382 ATPases associated with a variety of cellular activities AN401_16975 SM00448 cheY-homologous receiver domain AN401_16985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_16990 SM00052 Putative diguanylate phosphodiesterase AN401_16990 SM00448 cheY-homologous receiver domain AN401_16995 SM00073 Histidine Phosphotransfer domain AN401_16995 SM00387 Histidine kinase-like ATPases AN401_16995 SM00388 His Kinase A (phosphoacceptor) domain AN401_16995 SM00448 cheY-homologous receiver domain AN401_17010 SM00448 cheY-homologous receiver domain AN401_17010 SM00862 Transcriptional regulatory protein, C terminal AN401_17035 SM00893 Electron transfer flavoprotein domain AN401_17040 SM00893 Electron transfer flavoprotein domain AN401_17075 SM00062 Bacterial periplasmic substrate-binding proteins AN401_17075 SM00267 diguanylate cyclase AN401_17095 SM01117 AN401_17095 AN401_17105 SM00382 ATPases associated with a variety of cellular activities AN401_17135 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN401_17135 SM00091 PAS domain AN401_17135 SM00267 diguanylate cyclase AN401_17170 SM00382 ATPases associated with a variety of cellular activities AN401_17205 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN401_17205 SM00382 ATPases associated with a variety of cellular activities AN401_17220 SM00052 Putative diguanylate phosphodiesterase AN401_17235 SM00226 Low molecular weight phosphatase family AN401_17240 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN401_17265 SM00382 ATPases associated with a variety of cellular activities AN401_17290 SM01006 Siderophore biosynthesis protein domain AN401_17300 SM00382 ATPases associated with a variety of cellular activities AN401_17340 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_17360 SM00220 Serine/Threonine protein kinases, catalytic domain AN401_17360 SM00331 Sigma factor PP2C-like phosphatases AN401_17360 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AN401_17365 SM00448 cheY-homologous receiver domain AN401_17365 SM00862 Transcriptional regulatory protein, C terminal AN401_17370 SM00387 Histidine kinase-like ATPases AN401_17370 SM00388 His Kinase A (phosphoacceptor) domain AN401_17395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_17395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_17415 SM00421 helix_turn_helix, Lux Regulon AN401_17415 SM00448 cheY-homologous receiver domain AN401_17420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN401_17420 SM00091 PAS domain AN401_17420 SM00387 Histidine kinase-like ATPases AN401_17420 SM00388 His Kinase A (phosphoacceptor) domain AN401_17435 SM00849 Metallo-beta-lactamase superfamily AN401_17520 SM00347 helix_turn_helix multiple antibiotic resistance protein AN401_17580 SM00357 Cold shock protein domain AN401_17580 SM00382 ATPases associated with a variety of cellular activities AN401_17580 SM00959 Rho termination factor, N-terminal domain AN401_17590 SM00487 DEAD-like helicases superfamily AN401_17590 SM00490 helicase superfamily c-terminal domain AN401_17600 SM01004 Delta-aminolevulinic acid dehydratase AN401_17675 SM00382 ATPases associated with a variety of cellular activities AN401_17680 SM00710 Parallel beta-helix repeats AN401_17680 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AN401_17690 SM00900 AN401_17690 AN401_17700 SM00662 RNA polymerases D AN401_17705 SM00363 S4 RNA-binding domain AN401_17705 SM01390 AN401_17705 AN401_17760 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AN401_17765 SM01374 AN401_17765 AN401_17785 SM00322 K homology RNA-binding domain AN401_17820 SM01403 AN401_17820 AN401_17845 SM00859 Semialdehyde dehydrogenase, NAD binding domain AN401_17865 SM00062 Bacterial periplasmic substrate-binding proteins AN401_17865 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AN401_17895 SM00420 helix_turn_helix, Deoxyribose operon repressor AN401_17895 SM01134 AN401_17895 AN401_17905 SM01007 Class II Aldolase and Adducin N-terminal domain AN401_17945 SM00363 S4 RNA-binding domain AN401_17960 SM00344 helix_turn_helix ASNC type AN401_17970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_17970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_17980 SM00833 Cobalamin synthesis protein cobW C-terminal domain AN401_18015 SM00316 Ribosomal protein S1-like RNA-binding domain AN401_18015 SM00732 Likely ribonuclease with RNase H fold. AN401_18040 SM00382 ATPases associated with a variety of cellular activities AN401_18085 SM00382 ATPases associated with a variety of cellular activities AN401_18090 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AN401_18095 SM01400 AN401_18095 AN401_18100 SM00849 Metallo-beta-lactamase superfamily AN401_18100 SM01027 Beta-Casp domain AN401_18170 SM00382 ATPases associated with a variety of cellular activities AN401_18185 SM00062 Bacterial periplasmic substrate-binding proteins AN401_18190 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN401_18190 SM00895 AN401_18190 AN401_18250 SM00450 Rhodanese Homology Domain AN401_18290 SM00947 Carbonic anhydrase AN401_18305 SM00382 ATPases associated with a variety of cellular activities AN401_18310 SM00382 ATPases associated with a variety of cellular activities AN401_18310 SM00962 SRP54-type protein, GTPase domain AN401_18310 SM00963 SRP54-type protein, helical bundle domain AN401_18330 SM00450 Rhodanese Homology Domain AN401_18405 SM00864 Tubulin/FtsZ family, GTPase domain AN401_18405 SM00865 Tubulin/FtsZ family, C-terminal domain AN401_18465 SM00382 ATPases associated with a variety of cellular activities AN401_18485 SM00346 helix_turn_helix isocitrate lyase regulation AN401_18555 SM00155 Phospholipase D. Active site motifs. AN401_18560 SM00487 DEAD-like helicases superfamily AN401_18560 SM00490 helicase superfamily c-terminal domain AN401_18595 SM01230 AN401_18595 AN401_18610 SM00347 helix_turn_helix multiple antibiotic resistance protein AN401_18615 SM00387 Histidine kinase-like ATPases AN401_18615 SM00388 His Kinase A (phosphoacceptor) domain AN401_18620 SM00382 ATPases associated with a variety of cellular activities AN401_18620 SM00448 cheY-homologous receiver domain AN401_18645 SM00354 helix_turn _helix lactose operon repressor AN401_18655 SM00729 Elongator protein 3, MiaB family, Radical SAM AN401_18685 SM00363 S4 RNA-binding domain AN401_18690 SM00448 cheY-homologous receiver domain AN401_18735 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AN401_18735 SM00474 3'-5' exonuclease AN401_18735 SM00475 5'-3' exonuclease AN401_18735 SM00482 DNA polymerase A domain AN401_18765 SM00341 Helicase and RNase D C-terminal AN401_18765 SM00487 DEAD-like helicases superfamily AN401_18765 SM00490 helicase superfamily c-terminal domain AN401_18765 SM00956 AN401_18765 AN401_18775 SM00342 helix_turn_helix, arabinose operon control protein AN401_18820 SM01219 AN401_18820 AN401_18845 SM00028 Tetratricopeptide repeats AN401_18885 SM00382 ATPases associated with a variety of cellular activities AN401_18940 SM01091 Transporter associated domain AN401_18950 SM00052 Putative diguanylate phosphodiesterase AN401_18950 SM00091 PAS domain AN401_18950 SM00267 diguanylate cyclase AN401_18965 SM00420 helix_turn_helix, Deoxyribose operon repressor AN401_18965 SM01134 AN401_18965 AN401_18980 SM00382 ATPases associated with a variety of cellular activities AN401_19020 SM00470 ParB-like nuclease domain AN401_19035 SM01228 AN401_19035 AN401_19050 SM00382 ATPases associated with a variety of cellular activities AN401_19055 SM00382 ATPases associated with a variety of cellular activities AN401_19130 SM00382 ATPases associated with a variety of cellular activities AN401_19135 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AN401_19160 SM00382 ATPases associated with a variety of cellular activities AN401_19235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN401_19235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN401_19250 SM00344 helix_turn_helix ASNC type AN401_19275 SM00530 Helix-turn-helix XRE-family like proteins AN401_19280 SM00487 DEAD-like helicases superfamily AN401_19305 SM00382 ATPases associated with a variety of cellular activities AN401_19340 SM00382 ATPases associated with a variety of cellular activities AN401_19350 SM00062 Bacterial periplasmic substrate-binding proteins