C3497_06665 eac6057a75431b9444d99275dd4e9712 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_06665 eac6057a75431b9444d99275dd4e9712 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_06665 eac6057a75431b9444d99275dd4e9712 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 5.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_06665 eac6057a75431b9444d99275dd4e9712 209 SUPERFAMILY SSF46689 5 71 1.8E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_06665 eac6057a75431b9444d99275dd4e9712 209 Gene3D G3DSA:1.10.357.10 2 206 3.2E-20 T 14-10-2018 C3497_11960 3f10a65b7458eb6b84d313b9fc1187a7 1410 Pfam PF05567 Neisseria PilC beta-propeller domain 949 1230 4.5E-56 T 14-10-2018 IPR008707 PilC beta-propeller domain C3497_11960 3f10a65b7458eb6b84d313b9fc1187a7 1410 SUPERFAMILY SSF50998 932 1337 6.28E-14 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C3497_11960 3f10a65b7458eb6b84d313b9fc1187a7 1410 Gene3D G3DSA:2.130.10.10 884 1218 9.4E-12 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C3497_03210 e063c5d67e5e2d237b6eeeb08b50dd8a 365 SUPERFAMILY SSF52402 1 243 2.43E-56 T 14-10-2018 C3497_03210 e063c5d67e5e2d237b6eeeb08b50dd8a 365 Gene3D G3DSA:2.30.30.280 211 285 9.3E-25 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 C3497_03210 e063c5d67e5e2d237b6eeeb08b50dd8a 365 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 364 8.4E-132 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 C3497_03210 e063c5d67e5e2d237b6eeeb08b50dd8a 365 Pfam PF03054 tRNA methyl transferase 1 364 3.8E-135 T 14-10-2018 C3497_03210 e063c5d67e5e2d237b6eeeb08b50dd8a 365 Gene3D G3DSA:3.40.50.620 1 210 2.3E-91 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_03210 e063c5d67e5e2d237b6eeeb08b50dd8a 365 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 365 38.499 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 C3497_03210 e063c5d67e5e2d237b6eeeb08b50dd8a 365 Gene3D G3DSA:2.40.30.10 286 365 1.1E-23 T 14-10-2018 C3497_14435 ffa1eee8981c9fe9b4bfd257e90e9dda 317 Gene3D G3DSA:1.20.1530.20 176 315 8.8E-6 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C3497_14435 ffa1eee8981c9fe9b4bfd257e90e9dda 317 Pfam PF03547 Membrane transport protein 17 149 1.2E-6 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 C3497_14435 ffa1eee8981c9fe9b4bfd257e90e9dda 317 Pfam PF03547 Membrane transport protein 167 305 1.6E-11 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 C3497_13800 c97812ce287f722ae5d66612ce0f2afc 358 SUPERFAMILY SSF90002 271 351 5.23E-23 T 14-10-2018 C3497_13800 c97812ce287f722ae5d66612ce0f2afc 358 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 5 349 8.1E-153 T 14-10-2018 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 C3497_13800 c97812ce287f722ae5d66612ce0f2afc 358 Gene3D G3DSA:3.30.1220.10 237 353 4.6E-24 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily C3497_13800 c97812ce287f722ae5d66612ce0f2afc 358 Gene3D G3DSA:3.40.50.300 5 235 1.2E-59 T 14-10-2018 C3497_13800 c97812ce287f722ae5d66612ce0f2afc 358 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 271 352 1.9E-21 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal C3497_13800 c97812ce287f722ae5d66612ce0f2afc 358 SUPERFAMILY SSF52540 6 249 7.28E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13800 c97812ce287f722ae5d66612ce0f2afc 358 SMART SM00833 262 353 2.3E-13 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal C3497_13800 c97812ce287f722ae5d66612ce0f2afc 358 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 215 9.5E-55 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain C3497_13650 1d00fd78fc5153fb34ec3d64ade09c4f 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 235 1.2E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal C3497_13650 1d00fd78fc5153fb34ec3d64ade09c4f 240 Pfam PF00005 ABC transporter 20 165 6.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_13650 1d00fd78fc5153fb34ec3d64ade09c4f 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 240 2.7E-118 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 C3497_13650 1d00fd78fc5153fb34ec3d64ade09c4f 240 Gene3D G3DSA:3.40.50.300 2 240 2.1E-72 T 14-10-2018 C3497_13650 1d00fd78fc5153fb34ec3d64ade09c4f 240 SUPERFAMILY SSF52540 3 236 5.55E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13650 1d00fd78fc5153fb34ec3d64ade09c4f 240 SMART SM00382 28 221 4.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_09005 c888bf84a12108136f1d9ee0f924f40e 403 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 19 377 5.3E-76 T 14-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB C3497_09005 c888bf84a12108136f1d9ee0f924f40e 403 SUPERFAMILY SSF103473 13 382 1.1E-41 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_09005 c888bf84a12108136f1d9ee0f924f40e 403 Gene3D G3DSA:1.20.1250.20 4 382 3.7E-34 T 14-10-2018 C3497_00400 1a675da802bff19ddb57022d67c0d54b 456 SUPERFAMILY SSF53448 1 248 4.59E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_00400 1a675da802bff19ddb57022d67c0d54b 456 SUPERFAMILY SSF51161 250 434 2.62E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3497_00400 1a675da802bff19ddb57022d67c0d54b 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 450 3.2E-190 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 C3497_00400 1a675da802bff19ddb57022d67c0d54b 456 Gene3D G3DSA:3.90.550.10 1 223 7.3E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_00400 1a675da802bff19ddb57022d67c0d54b 456 Gene3D G3DSA:2.160.10.10 224 452 1.3E-66 T 14-10-2018 C3497_00400 1a675da802bff19ddb57022d67c0d54b 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 313 347 5.9E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_00400 1a675da802bff19ddb57022d67c0d54b 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 391 425 3.9E-7 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_00400 1a675da802bff19ddb57022d67c0d54b 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 295 4.0E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_00400 1a675da802bff19ddb57022d67c0d54b 456 Pfam PF12804 MobA-like NTP transferase domain 3 123 4.6E-25 T 14-10-2018 IPR025877 MobA-like NTP transferase C3497_00400 1a675da802bff19ddb57022d67c0d54b 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 448 41.875 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 C3497_01970 ccd06bc6e5b31d485152899828f728ea 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-21 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01970 ccd06bc6e5b31d485152899828f728ea 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01970 ccd06bc6e5b31d485152899828f728ea 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 9.0E-9 T 14-10-2018 C3497_01970 ccd06bc6e5b31d485152899828f728ea 37 SUPERFAMILY SSF57840 1 37 4.05E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01970 ccd06bc6e5b31d485152899828f728ea 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.239 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01970 ccd06bc6e5b31d485152899828f728ea 37 Pfam PF00444 Ribosomal protein L36 1 37 7.6E-18 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_02100 f5874c5f53571fd9491f94b1435af337 726 SMART SM00091 160 226 8.8E-13 T 14-10-2018 IPR000014 PAS domain C3497_02100 f5874c5f53571fd9491f94b1435af337 726 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 294 455 6.5E-44 T 14-10-2018 IPR000160 GGDEF domain C3497_02100 f5874c5f53571fd9491f94b1435af337 726 SUPERFAMILY SSF52172 23 178 1.57E-30 T 14-10-2018 IPR011006 CheY-like superfamily C3497_02100 f5874c5f53571fd9491f94b1435af337 726 Pfam PF00072 Response regulator receiver domain 26 135 1.6E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_02100 f5874c5f53571fd9491f94b1435af337 726 SUPERFAMILY SSF55073 301 458 1.49E-52 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_02100 f5874c5f53571fd9491f94b1435af337 726 SMART SM00448 24 135 1.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_02100 f5874c5f53571fd9491f94b1435af337 726 SUPERFAMILY SSF141868 472 719 4.45E-88 T 14-10-2018 IPR035919 EAL domain superfamily C3497_02100 f5874c5f53571fd9491f94b1435af337 726 SUPERFAMILY SSF55785 150 283 7.25E-21 T 14-10-2018 IPR035965 PAS domain superfamily C3497_02100 f5874c5f53571fd9491f94b1435af337 726 Gene3D G3DSA:3.30.70.270 291 468 2.0E-63 T 14-10-2018 C3497_02100 f5874c5f53571fd9491f94b1435af337 726 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 452 1.9E-52 T 14-10-2018 IPR000160 GGDEF domain C3497_02100 f5874c5f53571fd9491f94b1435af337 726 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 156 290 2.1E-18 T 14-10-2018 IPR000014 PAS domain C3497_02100 f5874c5f53571fd9491f94b1435af337 726 Pfam PF00989 PAS fold 165 268 8.4E-14 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3497_02100 f5874c5f53571fd9491f94b1435af337 726 SMART SM00052 467 712 1.5E-109 T 14-10-2018 IPR001633 EAL domain C3497_02100 f5874c5f53571fd9491f94b1435af337 726 SMART SM00267 285 457 2.1E-70 T 14-10-2018 IPR000160 GGDEF domain C3497_02100 f5874c5f53571fd9491f94b1435af337 726 Pfam PF00563 EAL domain 473 707 3.6E-77 T 14-10-2018 IPR001633 EAL domain C3497_02100 f5874c5f53571fd9491f94b1435af337 726 Gene3D G3DSA:3.30.450.20 154 290 3.4E-24 T 14-10-2018 C3497_02100 f5874c5f53571fd9491f94b1435af337 726 Gene3D G3DSA:3.40.50.2300 23 153 1.3E-26 T 14-10-2018 C3497_02100 f5874c5f53571fd9491f94b1435af337 726 Gene3D G3DSA:3.20.20.450 469 721 1.8E-99 T 14-10-2018 IPR035919 EAL domain superfamily C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SUPERFAMILY SSF55785 44 157 5.71E-16 T 14-10-2018 IPR035965 PAS domain superfamily C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Gene3D G3DSA:1.10.287.130 151 238 1.2E-31 T 14-10-2018 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SMART SM00387 287 403 1.3E-40 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SMART SM00073 740 838 2.5E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Pfam PF00072 Response regulator receiver domain 433 536 4.3E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Pfam PF00072 Response regulator receiver domain 576 697 4.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SMART SM00086 112 155 0.0067 T 14-10-2018 IPR001610 PAC motif C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 240 2.6E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SUPERFAMILY SSF55874 229 398 3.54E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Gene3D G3DSA:3.40.50.2300 426 543 4.2E-13 T 14-10-2018 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SUPERFAMILY SSF52172 573 702 1.99E-41 T 14-10-2018 IPR011006 CheY-like superfamily C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SMART SM00091 37 105 2.1E-4 T 14-10-2018 IPR000014 PAS domain C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Gene3D G3DSA:3.30.565.10 239 406 5.8E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SUPERFAMILY SSF52172 417 539 1.35E-15 T 14-10-2018 IPR011006 CheY-like superfamily C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Gene3D G3DSA:3.30.450.20 30 150 2.9E-22 T 14-10-2018 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 402 1.1E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SUPERFAMILY SSF47226 679 829 2.36E-23 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SUPERFAMILY SSF47384 160 241 1.96E-24 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Pfam PF08447 PAS fold 60 148 6.0E-10 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Gene3D G3DSA:3.40.50.2300 569 700 6.8E-47 T 14-10-2018 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Pfam PF01627 Hpt domain 750 828 2.2E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 381 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 342 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 356 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 400 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SMART SM00388 175 240 1.5E-27 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SMART SM00448 418 536 9.5E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 SMART SM00448 574 696 5.4E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_04225 77f902e59d658d6db7e5f7798abb46e3 841 Gene3D G3DSA:1.20.120.160 727 836 2.8E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_11115 17231686e107c2d5204e40f6226ee6d3 921 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 496 502 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3497_11115 17231686e107c2d5204e40f6226ee6d3 921 Gene3D G3DSA:3.40.50.150 73 205 7.1E-10 T 14-10-2018 C3497_11115 17231686e107c2d5204e40f6226ee6d3 921 Gene3D G3DSA:3.40.50.150 480 663 3.9E-15 T 14-10-2018 C3497_11115 17231686e107c2d5204e40f6226ee6d3 921 SUPERFAMILY SSF53335 42 202 1.82E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_11115 17231686e107c2d5204e40f6226ee6d3 921 SUPERFAMILY SSF53335 488 634 3.28E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_11115 17231686e107c2d5204e40f6226ee6d3 921 Pfam PF01555 DNA methylase 493 623 3.4E-5 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 C3497_11115 17231686e107c2d5204e40f6226ee6d3 921 Pfam PF01555 DNA methylase 113 154 2.4E-7 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 C3497_12410 c1426e9dfd51a54a58b9a6641b1ce448 75 Gene3D G3DSA:2.30.30.90 11 75 6.3E-27 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain C3497_12410 c1426e9dfd51a54a58b9a6641b1ce448 75 SUPERFAMILY SSF50037 5 74 9.84E-21 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal C3497_12410 c1426e9dfd51a54a58b9a6641b1ce448 75 SMART SM00899 1 74 1.7E-22 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 C3497_12410 c1426e9dfd51a54a58b9a6641b1ce448 75 Pfam PF04023 FeoA domain 1 73 9.2E-16 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SMART SM00091 501 569 3.9E-5 T 14-10-2018 IPR000014 PAS domain C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SMART SM00091 376 443 2.5 T 14-10-2018 IPR000014 PAS domain C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SMART SM00091 629 696 0.38 T 14-10-2018 IPR000014 PAS domain C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SUPERFAMILY SSF55785 486 615 1.01E-22 T 14-10-2018 IPR035965 PAS domain superfamily C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SUPERFAMILY SSF55073 762 916 2.75E-50 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SUPERFAMILY SSF103190 53 205 9.42E-6 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 Gene3D G3DSA:3.30.450.20 620 754 5.4E-13 T 14-10-2018 C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SUPERFAMILY SSF55785 614 744 1.55E-9 T 14-10-2018 IPR035965 PAS domain superfamily C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 Gene3D G3DSA:3.30.70.270 755 921 3.7E-59 T 14-10-2018 C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 753 917 1.2E-47 T 14-10-2018 IPR000160 GGDEF domain C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 Pfam PF14827 Double sensory domain of two-component sensor kinase 44 303 1.1E-20 T 14-10-2018 IPR029150 Double Cache domain 3 C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SMART SM00267 746 918 8.6E-60 T 14-10-2018 IPR000160 GGDEF domain C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SUPERFAMILY SSF55785 366 487 3.49E-17 T 14-10-2018 IPR035965 PAS domain superfamily C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 Gene3D G3DSA:3.30.450.20 494 613 9.1E-31 T 14-10-2018 C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 Gene3D G3DSA:2.10.70.100 445 491 1.8E-11 T 14-10-2018 C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 Gene3D G3DSA:3.30.450.20 373 444 5.1E-21 T 14-10-2018 C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 Pfam PF00990 Diguanylate cyclase, GGDEF domain 757 914 2.6E-43 T 14-10-2018 IPR000160 GGDEF domain C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SMART SM00086 448 489 0.031 T 14-10-2018 IPR001610 PAC motif C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 SMART SM00086 575 617 4.8E-10 T 14-10-2018 IPR001610 PAC motif C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 497 624 3.4E-11 T 14-10-2018 IPR000014 PAS domain C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 374 496 1.1E-8 T 14-10-2018 IPR000014 PAS domain C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 Pfam PF08447 PAS fold 524 611 6.1E-21 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3497_04585 dcc00686251146bb4cdae7ba8bc18332 925 Pfam PF08447 PAS fold 399 483 4.5E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 SUPERFAMILY SSF51905 1 346 1.02E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 473 1.2E-159 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 Gene3D G3DSA:3.50.50.60 164 286 1.2E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 336 4.8E-72 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 SUPERFAMILY SSF55424 351 473 2.23E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PIRSF PIRSF000350 1 470 5.1E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 157 1.8E-78 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 458 1.8E-78 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 1.8E-78 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 1.8E-78 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 184 209 1.8E-78 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.8E-78 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 323 1.8E-78 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 351 372 1.8E-78 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 1.8E-78 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 355 464 9.3E-36 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 1.1E-44 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.1E-44 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 1.1E-44 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 301 323 1.1E-44 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 184 202 1.1E-44 T 14-10-2018 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 Gene3D G3DSA:3.30.390.30 354 474 1.6E-43 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 Gene3D G3DSA:3.50.50.60 5 341 1.2E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_07050 07e6996b942f04cde473fc38b84fbdf2 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 C3497_14065 e14d87ebcbeb21b6c8d419ec16d12e06 859 SUPERFAMILY SSF109604 22 118 7.85E-6 T 14-10-2018 C3497_14065 e14d87ebcbeb21b6c8d419ec16d12e06 859 Gene3D G3DSA:3.40.50.300 231 447 9.5E-8 T 14-10-2018 C3497_14065 e14d87ebcbeb21b6c8d419ec16d12e06 859 Gene3D G3DSA:3.40.50.300 476 633 1.1E-6 T 14-10-2018 C3497_14065 e14d87ebcbeb21b6c8d419ec16d12e06 859 SMART SM00487 230 461 0.0083 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_14065 e14d87ebcbeb21b6c8d419ec16d12e06 859 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 1 180 6.0E-27 T 14-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain C3497_14065 e14d87ebcbeb21b6c8d419ec16d12e06 859 SUPERFAMILY SSF52540 253 627 2.25E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14065 e14d87ebcbeb21b6c8d419ec16d12e06 859 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 253 628 1.9E-55 T 14-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core C3497_14065 e14d87ebcbeb21b6c8d419ec16d12e06 859 Gene3D G3DSA:1.10.3210.30 1 230 3.1E-51 T 14-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily C3497_09260 cacedd70d950b32f5fed5283cce5f7ef 149 Pfam PF02050 Flagellar FliJ protein 20 143 2.0E-30 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 C3497_09260 cacedd70d950b32f5fed5283cce5f7ef 149 PIRSF PIRSF019404 2 149 1.4E-45 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 C3497_09260 cacedd70d950b32f5fed5283cce5f7ef 149 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 144 9.9E-29 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 C3497_09260 cacedd70d950b32f5fed5283cce5f7ef 149 PRINTS PR01004 Flagellar FliJ protein signature 109 127 4.9E-13 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 C3497_09260 cacedd70d950b32f5fed5283cce5f7ef 149 PRINTS PR01004 Flagellar FliJ protein signature 64 85 4.9E-13 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 C3497_09260 cacedd70d950b32f5fed5283cce5f7ef 149 PRINTS PR01004 Flagellar FliJ protein signature 127 147 4.9E-13 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 C3497_09260 cacedd70d950b32f5fed5283cce5f7ef 149 PRINTS PR01004 Flagellar FliJ protein signature 45 62 4.9E-13 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 C3497_09260 cacedd70d950b32f5fed5283cce5f7ef 149 PRINTS PR01004 Flagellar FliJ protein signature 5 27 4.9E-13 T 14-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 Gene3D G3DSA:3.90.199.10 61 534 7.4E-183 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 SUPERFAMILY SSF56719 60 534 1.28E-148 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 Gene3D G3DSA:3.30.1360.40 266 382 7.4E-183 T 14-10-2018 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 39 736 2.8E-239 T 14-10-2018 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 SUPERFAMILY SSF101904 550 762 3.92E-42 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 SMART SM00434 40 512 8.3E-216 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 Gene3D G3DSA:1.10.268.10 420 505 7.4E-183 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 734 0.0072 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 601 639 1.5 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 61 518 2.9E-129 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 33 782 32.976 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_09385 eaadaff2e3fd5fe19723684f85845889 788 Gene3D G3DSA:2.120.10.90 548 782 1.6E-18 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 Pfam PF01817 Chorismate mutase type II 9 83 7.8E-23 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 Pfam PF01842 ACT domain 273 336 2.0E-10 T 14-10-2018 IPR002912 ACT domain C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 Gene3D G3DSA:3.30.70.260 265 353 5.7E-30 T 14-10-2018 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 Gene3D G3DSA:3.40.190.10 89 259 6.6E-59 T 14-10-2018 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 TIGRFAM TIGR01807 CM_P2: chorismate mutase 5 75 1.1E-25 T 14-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 SUPERFAMILY SSF53850 86 269 8.68E-59 T 14-10-2018 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 Gene3D G3DSA:1.20.59.10 1 85 6.9E-27 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 Gene3D G3DSA:3.40.190.10 167 251 6.6E-59 T 14-10-2018 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 Pfam PF00800 Prephenate dehydratase 87 263 3.6E-60 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 SMART SM00830 9 85 5.4E-28 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 237 259 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 PIRSF PIRSF001500 1 354 1.7E-139 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 SUPERFAMILY SSF48600 3 89 8.7E-21 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3497_09575 5b086bd6e9ac7d62e8e36d05e6bd498d 354 SUPERFAMILY SSF55021 256 350 2.18E-28 T 14-10-2018 C3497_10760 a73b10a6405e5f76e203a795c6ffa385 452 Pfam PF05598 Transposase domain (DUF772) 52 121 5.8E-16 T 14-10-2018 IPR008490 Transposase InsH, N-terminal C3497_10760 a73b10a6405e5f76e203a795c6ffa385 452 Pfam PF01609 Transposase DDE domain 276 443 3.8E-17 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_10700 a73b10a6405e5f76e203a795c6ffa385 452 Pfam PF05598 Transposase domain (DUF772) 52 121 5.8E-16 T 14-10-2018 IPR008490 Transposase InsH, N-terminal C3497_10700 a73b10a6405e5f76e203a795c6ffa385 452 Pfam PF01609 Transposase DDE domain 276 443 3.8E-17 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_00800 7a7fc7a6b010d51946f93c15da90a41b 154 Pfam PF03061 Thioesterase superfamily 63 136 1.4E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3497_00800 7a7fc7a6b010d51946f93c15da90a41b 154 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 34 144 1.5E-26 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 C3497_00800 7a7fc7a6b010d51946f93c15da90a41b 154 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 34 146 1.7E-50 T 14-10-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 C3497_00800 7a7fc7a6b010d51946f93c15da90a41b 154 SUPERFAMILY SSF54637 14 141 7.9E-33 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_00800 7a7fc7a6b010d51946f93c15da90a41b 154 Gene3D G3DSA:3.10.129.10 17 153 1.7E-53 T 14-10-2018 C3497_12955 239058b90a20ef7f02c2acd32e5c0a50 293 PIRSF PIRSF000103 1 293 3.6E-79 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 C3497_12955 239058b90a20ef7f02c2acd32e5c0a50 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 284 2.0E-34 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 C3497_12955 239058b90a20ef7f02c2acd32e5c0a50 293 SUPERFAMILY SSF48179 163 286 4.53E-36 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_12955 239058b90a20ef7f02c2acd32e5c0a50 293 SUPERFAMILY SSF51735 1 161 2.51E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_12955 239058b90a20ef7f02c2acd32e5c0a50 293 Gene3D G3DSA:3.40.50.720 1 162 2.3E-52 T 14-10-2018 C3497_12955 239058b90a20ef7f02c2acd32e5c0a50 293 Gene3D G3DSA:1.10.1040.10 163 290 1.1E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C3497_12955 239058b90a20ef7f02c2acd32e5c0a50 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 3.7E-48 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 C3497_12955 239058b90a20ef7f02c2acd32e5c0a50 293 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 C3497_11910 4d8b0c6e1975b9d3f1efd3c99761cb02 78 Gene3D G3DSA:1.10.10.60 1 77 2.4E-25 T 14-10-2018 C3497_11910 4d8b0c6e1975b9d3f1efd3c99761cb02 78 SUPERFAMILY SSF46689 11 77 4.78E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_11910 4d8b0c6e1975b9d3f1efd3c99761cb02 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 41 58 1.2E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_11910 4d8b0c6e1975b9d3f1efd3c99761cb02 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 58 78 1.2E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_11910 4d8b0c6e1975b9d3f1efd3c99761cb02 78 PIRSF PIRSF002097 1 78 8.9E-32 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 C3497_11910 4d8b0c6e1975b9d3f1efd3c99761cb02 78 Pfam PF02954 Bacterial regulatory protein, Fis family 35 75 1.1E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 203 229 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 PRINTS PR00046 Major sigma-70 factor signature 186 198 1.0E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 PRINTS PR00046 Major sigma-70 factor signature 218 229 1.0E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 PRINTS PR00046 Major sigma-70 factor signature 40 53 1.0E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 PRINTS PR00046 Major sigma-70 factor signature 203 218 1.0E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 Pfam PF04545 Sigma-70, region 4 182 231 5.8E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 Gene3D G3DSA:1.20.140.160 84 234 2.0E-46 T 14-10-2018 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 2 236 63.66 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 SUPERFAMILY SSF88946 3 85 1.83E-25 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 231 1.2E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 13 232 1.1E-83 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 SUPERFAMILY SSF88659 146 233 1.23E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 Pfam PF04542 Sigma-70 region 2 13 85 8.2E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 Pfam PF04539 Sigma-70 region 3 94 152 5.5E-13 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 PIRSF PIRSF000770 2 243 2.0E-38 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 SUPERFAMILY SSF88659 86 155 3.62E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 Gene3D G3DSA:1.10.1740.10 2 82 2.9E-29 T 14-10-2018 C3497_03735 1fd6b81a824bd431122c3d1e474a70a5 256 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 40 53 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_00760 07fa11121fb34f082fc5899d26e29446 626 SMART SM00267 449 621 9.4E-45 T 14-10-2018 IPR000160 GGDEF domain C3497_00760 07fa11121fb34f082fc5899d26e29446 626 SUPERFAMILY SSF109604 13 283 7.38E-42 T 14-10-2018 C3497_00760 07fa11121fb34f082fc5899d26e29446 626 Pfam PF00072 Response regulator receiver domain 318 429 3.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_00760 07fa11121fb34f082fc5899d26e29446 626 SUPERFAMILY SSF55073 465 618 9.42E-43 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_00760 07fa11121fb34f082fc5899d26e29446 626 Pfam PF08668 HDOD domain 18 210 9.9E-35 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_00760 07fa11121fb34f082fc5899d26e29446 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 457 620 8.6E-43 T 14-10-2018 IPR000160 GGDEF domain C3497_00760 07fa11121fb34f082fc5899d26e29446 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 460 617 8.3E-41 T 14-10-2018 IPR000160 GGDEF domain C3497_00760 07fa11121fb34f082fc5899d26e29446 626 Gene3D G3DSA:1.10.3210.10 16 276 1.9E-52 T 14-10-2018 C3497_00760 07fa11121fb34f082fc5899d26e29446 626 Gene3D G3DSA:3.40.50.2300 302 447 7.5E-35 T 14-10-2018 C3497_00760 07fa11121fb34f082fc5899d26e29446 626 SMART SM00448 316 429 3.3E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_00760 07fa11121fb34f082fc5899d26e29446 626 Gene3D G3DSA:3.30.70.270 454 623 5.6E-53 T 14-10-2018 C3497_00760 07fa11121fb34f082fc5899d26e29446 626 SUPERFAMILY SSF52172 314 455 5.83E-36 T 14-10-2018 IPR011006 CheY-like superfamily C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 194 777 4.4E-179 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00943 Copper-transporting ATPase signature 179 198 4.9E-14 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00943 Copper-transporting ATPase signature 645 662 4.9E-14 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00943 Copper-transporting ATPase signature 390 404 4.9E-14 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00943 Copper-transporting ATPase signature 452 467 4.9E-14 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00943 Copper-transporting ATPase signature 236 255 4.9E-14 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00943 Copper-transporting ATPase signature 741 755 4.9E-14 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00943 Copper-transporting ATPase signature 256 274 4.9E-14 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 Gene3D G3DSA:2.70.150.20 260 372 2.2E-42 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 Pfam PF04945 YHS domain 26 69 7.7E-14 T 14-10-2018 IPR007029 YHS domain C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 SUPERFAMILY SSF56784 467 775 1.3E-55 T 14-10-2018 IPR036412 HAD-like superfamily C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 Pfam PF00702 haloacid dehalogenase-like hydrolase 465 682 1.5E-35 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 SMART SM00746 27 64 4.1E-8 T 14-10-2018 IPR011017 TRASH domain C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 471 477 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 691 703 6.9E-28 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 593 604 6.9E-28 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 668 687 6.9E-28 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 483 6.9E-28 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 317 331 6.9E-28 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 615 625 6.9E-28 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 SUPERFAMILY SSF81653 269 367 1.57E-26 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 Pfam PF00122 E1-E2 ATPase 267 448 4.1E-55 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 234 777 3.5E-110 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 SUPERFAMILY SSF81665 236 463 9.55E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 238 746 7.9E-83 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 176 777 1.3E-169 T 14-10-2018 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 SUPERFAMILY SSF47240 27 68 8.11E-5 T 14-10-2018 IPR009078 Ferritin-like superfamily C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 Gene3D G3DSA:1.10.620.20 8 92 8.9E-6 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 Gene3D G3DSA:3.40.1110.10 480 600 3.1E-86 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C3497_10955 11693c594f2de6ae3f4a3a82ad8aa513 782 Gene3D G3DSA:3.40.50.1000 450 720 3.1E-86 T 14-10-2018 IPR023214 HAD superfamily C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 469 3.7E-29 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 471 5.6E-161 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 Gene3D G3DSA:2.40.33.10 71 167 1.5E-161 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 SUPERFAMILY SSF51621 2 336 4.89E-94 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 213 225 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 PRINTS PR01050 Pyruvate kinase family signature 242 266 1.1E-58 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 PRINTS PR01050 Pyruvate kinase family signature 267 291 1.1E-58 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.1E-58 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.1E-58 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 PRINTS PR01050 Pyruvate kinase family signature 292 310 1.1E-58 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 PRINTS PR01050 Pyruvate kinase family signature 215 241 1.1E-58 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 PRINTS PR01050 Pyruvate kinase family signature 311 327 1.1E-58 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 Gene3D G3DSA:3.40.1380.20 334 467 1.5E-161 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 Pfam PF00224 Pyruvate kinase, barrel domain 3 336 7.9E-119 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 SUPERFAMILY SSF52935 321 472 1.14E-37 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 Gene3D G3DSA:3.20.20.60 3 333 1.5E-161 T 14-10-2018 C3497_03435 59cb11f0b6a29b853b859a57c331d060 480 SUPERFAMILY SSF50800 71 164 3.66E-25 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 SUPERFAMILY SSF55326 222 423 1.53E-59 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 SUPERFAMILY SSF56042 819 1050 2.62E-48 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 Gene3D G3DSA:3.90.650.10 416 602 6.5E-57 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 Gene3D G3DSA:3.90.650.10 810 998 1.6E-32 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 7 1312 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 Gene3D G3DSA:3.30.1330.10 215 415 9.9E-43 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 Pfam PF02769 AIR synthase related protein, C-terminal domain 832 983 1.8E-10 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 Pfam PF02769 AIR synthase related protein, C-terminal domain 428 585 8.5E-30 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 SUPERFAMILY SSF109736 156 221 1.57E-22 T 14-10-2018 C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 Gene3D G3DSA:3.30.1330.10 613 803 1.1E-23 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 SUPERFAMILY SSF82697 5 153 2.62E-44 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 SUPERFAMILY SSF52317 1054 1312 1.43E-91 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 SUPERFAMILY SSF55326 616 811 2.88E-65 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1313 21.043 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 Gene3D G3DSA:3.40.50.880 999 1313 2.5E-130 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 SMART SM01211 1057 1312 4.6E-142 T 14-10-2018 C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 SUPERFAMILY SSF56042 428 651 4.04E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 Gene3D G3DSA:1.10.8.750 154 214 6.5E-28 T 14-10-2018 C3497_05200 d4d6af16e768fbbff2410ba2d4c64ee8 1313 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1058 1312 5.9E-104 T 14-10-2018 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 SUPERFAMILY SSF64518 1 504 1.1E-101 T 14-10-2018 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 PRINTS PR00207 Flagellin signature 76 95 5.6E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 PRINTS PR00207 Flagellin signature 37 54 5.6E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 PRINTS PR00207 Flagellin signature 111 134 5.6E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 Pfam PF07196 Flagellin hook IN motif 202 245 7.2E-8 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 Pfam PF00700 Bacterial flagellin C-terminal helical region 419 503 3.4E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 Gene3D G3DSA:1.20.58.1830 5 503 5.4E-140 T 14-10-2018 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 Gene3D G3DSA:2.30.220.10 190 286 5.4E-140 T 14-10-2018 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.4E-43 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 Gene3D G3DSA:2.170.280.10 178 411 5.4E-140 T 14-10-2018 C3497_09145 b7fa12b2ea412db3868fba4c82d0005a 505 Gene3D G3DSA:1.20.1330.10 45 463 5.4E-140 T 14-10-2018 C3497_03020 dd886cc7d3f6071973354e13f695182a 550 Gene3D G3DSA:3.30.260.10 136 410 1.0E-241 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily C3497_03020 dd886cc7d3f6071973354e13f695182a 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.1E-260 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_03020 dd886cc7d3f6071973354e13f695182a 550 SUPERFAMILY SSF52029 185 376 4.78E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily C3497_03020 dd886cc7d3f6071973354e13f695182a 550 Gene3D G3DSA:3.50.7.10 192 372 1.0E-241 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily C3497_03020 dd886cc7d3f6071973354e13f695182a 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_03020 dd886cc7d3f6071973354e13f695182a 550 Gene3D G3DSA:1.10.560.10 8 521 1.0E-241 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily C3497_03020 dd886cc7d3f6071973354e13f695182a 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.3E-99 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 C3497_03020 dd886cc7d3f6071973354e13f695182a 550 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_03020 dd886cc7d3f6071973354e13f695182a 550 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_03020 dd886cc7d3f6071973354e13f695182a 550 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_03020 dd886cc7d3f6071973354e13f695182a 550 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_03020 dd886cc7d3f6071973354e13f695182a 550 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_03020 dd886cc7d3f6071973354e13f695182a 550 SUPERFAMILY SSF48592 7 521 1.07E-79 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily C3497_03020 dd886cc7d3f6071973354e13f695182a 550 SUPERFAMILY SSF54849 137 202 5.04E-25 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily C3497_03020 dd886cc7d3f6071973354e13f695182a 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 548 41.989 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 Pfam PF13375 RnfC Barrel sandwich hybrid domain 20 116 7.4E-27 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 419 430 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 SUPERFAMILY SSF46548 331 445 5.23E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 Pfam PF10531 SLBB domain 298 347 5.4E-13 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 510 157.73 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 286 2.0E-50 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 Gene3D G3DSA:3.40.50.11540 145 295 5.0E-16 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 Pfam PF12838 4Fe-4S dicluster domain 380 432 2.5E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 18 449 7.3E-162 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 Gene3D G3DSA:3.30.70.3270 361 505 1.7E-11 T 14-10-2018 C3497_06240 346fc30914a5d2a9dc8c1f449452ed6e 510 SUPERFAMILY SSF142019 99 305 1.44E-58 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 375 34.273 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 SUPERFAMILY SSF55347 136 362 8.83E-74 T 14-10-2018 C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 Gene3D G3DSA:3.30.360.10 141 358 2.2E-82 T 14-10-2018 C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 123 1.1E-25 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 269 283 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 SMART SM00859 3 124 3.5E-30 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 SUPERFAMILY SSF51735 1 149 1.62E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 146 361 1.5E-50 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 PIRSF PIRSF000148 1 377 1.8E-62 T 14-10-2018 C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 Gene3D G3DSA:3.40.50.720 1 140 1.7E-58 T 14-10-2018 C3497_04065 248ebfe7e6b8cbd858bd9f731a329798 377 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 3 375 1.8E-189 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3497_07255 bc4269a4117f7273c55925484a70e9db 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 421 1.8E-202 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 C3497_07255 bc4269a4117f7273c55925484a70e9db 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 5.5E-143 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_07255 bc4269a4117f7273c55925484a70e9db 423 SUPERFAMILY SSF53383 1 421 1.6E-132 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_07255 bc4269a4117f7273c55925484a70e9db 423 Gene3D G3DSA:3.90.1150.10 289 423 2.1E-52 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_07255 bc4269a4117f7273c55925484a70e9db 423 Gene3D G3DSA:3.40.640.10 1 285 2.2E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_07255 bc4269a4117f7273c55925484a70e9db 423 PIRSF PIRSF001434 1 423 6.7E-132 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_07255 bc4269a4117f7273c55925484a70e9db 423 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_11645 f43d31e7178c72228b4e5dcc2aaefc89 621 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 24 185 5.4E-16 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 C3497_11645 f43d31e7178c72228b4e5dcc2aaefc89 621 Gene3D G3DSA:3.30.70.20 541 620 9.8E-8 T 14-10-2018 C3497_11645 f43d31e7178c72228b4e5dcc2aaefc89 621 SUPERFAMILY SSF54862 540 617 6.42E-9 T 14-10-2018 C3497_11645 f43d31e7178c72228b4e5dcc2aaefc89 621 Gene3D G3DSA:3.40.50.970 3 188 8.0E-57 T 14-10-2018 C3497_11645 f43d31e7178c72228b4e5dcc2aaefc89 621 Pfam PF13237 4Fe-4S dicluster domain 546 601 8.1E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_11645 f43d31e7178c72228b4e5dcc2aaefc89 621 SUPERFAMILY SSF52518 12 228 2.85E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_11645 f43d31e7178c72228b4e5dcc2aaefc89 621 SUPERFAMILY SSF52518 349 561 2.98E-34 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_11645 f43d31e7178c72228b4e5dcc2aaefc89 621 PIRSF PIRSF006439 1 613 1.5E-238 T 14-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 C3497_11645 f43d31e7178c72228b4e5dcc2aaefc89 621 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 377 524 6.1E-25 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 C3497_11645 f43d31e7178c72228b4e5dcc2aaefc89 621 Gene3D G3DSA:3.40.50.970 360 540 5.5E-23 T 14-10-2018 C3497_08125 d30b92501eae0d3cc637e6c7f4d8082a 231 SMART SM00862 154 230 7.2E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_08125 d30b92501eae0d3cc637e6c7f4d8082a 231 Gene3D G3DSA:3.40.50.2300 2 130 1.2E-37 T 14-10-2018 C3497_08125 d30b92501eae0d3cc637e6c7f4d8082a 231 Gene3D G3DSA:1.10.10.10 131 231 7.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_08125 d30b92501eae0d3cc637e6c7f4d8082a 231 SUPERFAMILY SSF52172 10 183 5.69E-41 T 14-10-2018 IPR011006 CheY-like superfamily C3497_08125 d30b92501eae0d3cc637e6c7f4d8082a 231 SMART SM00448 8 118 3.8E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_08125 d30b92501eae0d3cc637e6c7f4d8082a 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 7.0E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_08125 d30b92501eae0d3cc637e6c7f4d8082a 231 Pfam PF00072 Response regulator receiver domain 10 118 8.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_10685 5c3f78344dda4c7cf36756cc55b314a3 228 SMART SM00448 1 111 3.7E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_10685 5c3f78344dda4c7cf36756cc55b314a3 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 223 8.2E-93 T 14-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 C3497_10685 5c3f78344dda4c7cf36756cc55b314a3 228 Gene3D G3DSA:3.40.50.2300 1 119 3.8E-41 T 14-10-2018 C3497_10685 5c3f78344dda4c7cf36756cc55b314a3 228 Gene3D G3DSA:1.10.10.10 126 227 1.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_10685 5c3f78344dda4c7cf36756cc55b314a3 228 SMART SM00862 148 223 3.3E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_10685 5c3f78344dda4c7cf36756cc55b314a3 228 SUPERFAMILY SSF46894 128 224 2.83E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_10685 5c3f78344dda4c7cf36756cc55b314a3 228 Pfam PF00072 Response regulator receiver domain 3 112 7.3E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_10685 5c3f78344dda4c7cf36756cc55b314a3 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 9.7E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_10685 5c3f78344dda4c7cf36756cc55b314a3 228 SUPERFAMILY SSF52172 1 119 3.56E-41 T 14-10-2018 IPR011006 CheY-like superfamily C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 9 361 3.4E-120 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 Gene3D G3DSA:3.30.1360.120 14 239 1.6E-84 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 SUPERFAMILY SSF103025 8 280 1.11E-90 T 14-10-2018 C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 Gene3D G3DSA:2.40.30.110 284 367 1.8E-26 T 14-10-2018 C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 271 357 4.8E-13 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 Gene3D G3DSA:3.30.70.1400 58 145 1.6E-84 T 14-10-2018 C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 Pfam PF01571 Aminomethyltransferase folate-binding domain 14 262 2.6E-87 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 SUPERFAMILY SSF101790 278 364 3.6E-21 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 Gene3D G3DSA:4.10.1250.10 240 282 2.8E-20 T 14-10-2018 C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 Hamap MF_00259 Aminomethyltransferase [gcvT]. 8 362 43.406 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 C3497_07620 987dc74b858c7decfc5e2ff881fb6196 367 PIRSF PIRSF006487 1 366 1.1E-80 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 C3497_01680 001f46d01a71867f17afdae149046278 1089 Gene3D G3DSA:3.40.50.280 14 157 7.0E-58 T 14-10-2018 C3497_01680 001f46d01a71867f17afdae149046278 1089 Pfam PF01642 Methylmalonyl-CoA mutase 564 1083 2.9E-148 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 C3497_01680 001f46d01a71867f17afdae149046278 1089 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 723 1087 1.9E-92 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 C3497_01680 001f46d01a71867f17afdae149046278 1089 Gene3D G3DSA:3.20.20.240 554 1085 1.4E-186 T 14-10-2018 C3497_01680 001f46d01a71867f17afdae149046278 1089 SUPERFAMILY SSF52540 134 469 2.47E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01680 001f46d01a71867f17afdae149046278 1089 SUPERFAMILY SSF51703 510 1085 4.97E-153 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 C3497_01680 001f46d01a71867f17afdae149046278 1089 Pfam PF02310 B12 binding domain 20 115 5.5E-10 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 C3497_01680 001f46d01a71867f17afdae149046278 1089 SUPERFAMILY SSF52242 9 150 1.44E-40 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 C3497_01680 001f46d01a71867f17afdae149046278 1089 Hamap MF_02050 Fused isobutyryl-CoA mutase [icmF]. 18 1089 17.111 T 14-10-2018 IPR033669 Fused isobutyryl-CoA mutase GO:0003924|GO:0005525|GO:0006637|GO:0031419|GO:0034784|GO:0047727 C3497_01680 001f46d01a71867f17afdae149046278 1089 Gene3D G3DSA:3.40.50.300 204 412 5.8E-60 T 14-10-2018 C3497_01680 001f46d01a71867f17afdae149046278 1089 Pfam PF03308 ArgK protein 176 427 7.3E-43 T 14-10-2018 C3497_00020 c4abd9020bc53ae7a8b685b12a6cf0eb 235 Pfam PF13174 Tetratricopeptide repeat 190 222 7.3E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_00020 c4abd9020bc53ae7a8b685b12a6cf0eb 235 Pfam PF13432 Tetratricopeptide repeat 122 185 1.6E-7 T 14-10-2018 C3497_00020 c4abd9020bc53ae7a8b685b12a6cf0eb 235 Gene3D G3DSA:1.20.5.110 25 104 1.4E-5 T 14-10-2018 C3497_00020 c4abd9020bc53ae7a8b685b12a6cf0eb 235 Pfam PF16331 TolA binding protein trimerisation 37 104 1.7E-20 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 C3497_00020 c4abd9020bc53ae7a8b685b12a6cf0eb 235 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 1 235 18.341 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 C3497_00020 c4abd9020bc53ae7a8b685b12a6cf0eb 235 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 115 232 9.9E-35 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal C3497_00020 c4abd9020bc53ae7a8b685b12a6cf0eb 235 SUPERFAMILY SSF48452 116 230 7.4E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_00020 c4abd9020bc53ae7a8b685b12a6cf0eb 235 Gene3D G3DSA:1.25.40.10 115 234 1.6E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Gene3D G3DSA:2.120.10.90 531 841 3.3E-127 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 790 7.8E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 794 837 5.0E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 738 3.1E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 638 8.3E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 688 3.4E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 7.8E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 1.3E-153 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 SMART SM00434 11 499 4.4E-291 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 7 842 24.482 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 SUPERFAMILY SSF101904 533 848 2.35E-112 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 841 0.0 T 14-10-2018 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Gene3D G3DSA:3.90.199.10 33 521 1.0E-225 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Gene3D G3DSA:1.10.268.10 370 493 1.0E-225 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 SUPERFAMILY SSF56719 30 522 3.01E-180 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3497_09585 c4150eb1dfbdd2276536bc9a1ba836e7 863 Gene3D G3DSA:3.30.1360.40 236 333 1.0E-225 T 14-10-2018 C3497_14255 6ac2c8724486159013ad0adb5944f693 363 Gene3D G3DSA:3.40.1350.30 45 185 3.8E-118 T 14-10-2018 C3497_14255 6ac2c8724486159013ad0adb5944f693 363 Gene3D G3DSA:3.40.50.150 13 357 3.8E-118 T 14-10-2018 C3497_14255 6ac2c8724486159013ad0adb5944f693 363 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 344 354 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site C3497_14255 6ac2c8724486159013ad0adb5944f693 363 SUPERFAMILY SSF53335 10 361 6.47E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_14255 6ac2c8724486159013ad0adb5944f693 363 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 295 324 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site C3497_14255 6ac2c8724486159013ad0adb5944f693 363 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 362 40.015 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 C3497_14255 6ac2c8724486159013ad0adb5944f693 363 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 362 4.3E-146 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 C3497_14255 6ac2c8724486159013ad0adb5944f693 363 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 362 2.6E-142 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 C3497_02970 c18e33a00060cfa7dc8569417d2e8842 198 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 182 4.1E-8 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal C3497_02970 c18e33a00060cfa7dc8569417d2e8842 198 SUPERFAMILY SSF52833 1 98 6.69E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_02970 c18e33a00060cfa7dc8569417d2e8842 198 Gene3D G3DSA:3.40.30.10 2 190 1.5E-74 T 14-10-2018 C3497_02970 c18e33a00060cfa7dc8569417d2e8842 198 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 72 6.2E-17 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3497_02970 c18e33a00060cfa7dc8569417d2e8842 198 Gene3D G3DSA:1.20.1050.10 80 182 1.5E-74 T 14-10-2018 C3497_02970 c18e33a00060cfa7dc8569417d2e8842 198 SUPERFAMILY SSF47616 73 197 1.41E-25 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 SUPERFAMILY SSF58014 45 136 9.68E-24 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 Hamap MF_01151 Protein GrpE [grpE]. 2 194 19.502 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 SUPERFAMILY SSF51064 142 196 2.48E-17 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 Gene3D G3DSA:3.90.20.20 37 137 1.6E-25 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 ProSitePatterns PS01071 grpE protein signature. 150 192 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 Pfam PF01025 GrpE 42 194 1.8E-46 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 Gene3D G3DSA:2.30.22.10 140 194 5.5E-21 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 PRINTS PR00773 GrpE protein signature 95 110 3.9E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 PRINTS PR00773 GrpE protein signature 147 162 3.9E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 PRINTS PR00773 GrpE protein signature 67 83 3.9E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3497_04175 e747b1b17b590f5d503a4c206ff22743 198 PRINTS PR00773 GrpE protein signature 173 192 3.9E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR01900 YidC translocation/secretion protein signature 474 489 7.9E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR01900 YidC translocation/secretion protein signature 493 517 7.9E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR01900 YidC translocation/secretion protein signature 345 361 7.9E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR00701 60kDa inner membrane protein signature 80 101 1.1E-77 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR00701 60kDa inner membrane protein signature 167 187 1.1E-77 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR00701 60kDa inner membrane protein signature 421 444 1.1E-77 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.1E-77 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR00701 60kDa inner membrane protein signature 257 272 1.1E-77 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR00701 60kDa inner membrane protein signature 468 490 1.1E-77 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR00701 60kDa inner membrane protein signature 330 350 1.1E-77 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR00701 60kDa inner membrane protein signature 222 240 1.1E-77 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 PRINTS PR00701 60kDa inner membrane protein signature 504 527 1.1E-77 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 Gene3D G3DSA:2.70.98.90 73 339 6.6E-87 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 540 24.793 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 Pfam PF14849 YidC periplasmic domain 74 349 3.1E-83 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 Pfam PF02096 60Kd inner membrane protein 360 537 3.8E-60 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 359 538 6.4E-71 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_14400 f1ceb441dc033ecc252dcb8b44bc31ae 550 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 358 2.3E-107 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 Pfam PF13365 Trypsin-like peptidase domain 116 251 8.3E-36 T 14-10-2018 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 Gene3D G3DSA:2.40.10.120 61 283 5.5E-79 T 14-10-2018 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 SUPERFAMILY SSF50494 64 286 9.08E-66 T 14-10-2018 IPR009003 Peptidase S1, PA clan C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 PRINTS PR00834 HtrA/DegQ protease family signature 330 342 8.1E-55 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 PRINTS PR00834 HtrA/DegQ protease family signature 146 166 8.1E-55 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 PRINTS PR00834 HtrA/DegQ protease family signature 125 137 8.1E-55 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 PRINTS PR00834 HtrA/DegQ protease family signature 187 211 8.1E-55 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 8.1E-55 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 8.1E-55 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 SUPERFAMILY SSF50156 248 372 4.6E-25 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 64 383 7.7E-130 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 Pfam PF13180 PDZ domain 306 381 6.9E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 SMART SM00228 290 372 7.6E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_11355 c5442af0d3407be6523ca0ee38c76382 390 Gene3D G3DSA:2.30.42.10 285 385 8.7E-26 T 14-10-2018 C3497_09925 12b8c5d995910219d63676aad07f1ddd 69 Gene3D G3DSA:3.30.70.100 1 67 3.1E-23 T 14-10-2018 C3497_09925 12b8c5d995910219d63676aad07f1ddd 69 Pfam PF00403 Heavy-metal-associated domain 5 66 1.6E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C3497_09925 12b8c5d995910219d63676aad07f1ddd 69 SUPERFAMILY SSF55008 1 66 3.67E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3497_09925 12b8c5d995910219d63676aad07f1ddd 69 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 SMART SM00388 687 753 1.7E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 Gene3D G3DSA:3.30.565.10 752 911 2.5E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 888 1.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 PRINTS PR00344 Bacterial sensor protein C-terminal signature 854 864 1.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 PRINTS PR00344 Bacterial sensor protein C-terminal signature 894 907 1.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 PRINTS PR00344 Bacterial sensor protein C-terminal signature 836 850 1.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 SMART SM00387 800 910 2.2E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 801 907 9.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 SUPERFAMILY SSF55874 744 906 1.83E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 Pfam PF00512 His Kinase A (phospho-acceptor) domain 688 753 5.7E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 SUPERFAMILY SSF47384 673 754 4.12E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_04555 e469e9219bd0f408b5f6fcf7f89284a9 1005 Gene3D G3DSA:1.10.287.130 650 751 2.5E-24 T 14-10-2018 C3497_02045 0f02da31d74ead9117cdb68d1df835a7 1069 SMART SM00487 268 499 6.5E-7 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_02045 0f02da31d74ead9117cdb68d1df835a7 1069 SUPERFAMILY SSF52540 417 702 5.69E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02045 0f02da31d74ead9117cdb68d1df835a7 1069 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 719 4.5E-178 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 C3497_02045 0f02da31d74ead9117cdb68d1df835a7 1069 SUPERFAMILY SSF52540 224 517 1.04E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02045 0f02da31d74ead9117cdb68d1df835a7 1069 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 211 1.8E-44 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 C3497_02045 0f02da31d74ead9117cdb68d1df835a7 1069 Gene3D G3DSA:3.40.50.300 485 729 4.1E-44 T 14-10-2018 C3497_02045 0f02da31d74ead9117cdb68d1df835a7 1069 Pfam PF11867 Domain of unknown function (DUF3387) 719 1055 1.5E-125 T 14-10-2018 IPR021810 Protein of unknown function DUF3387 C3497_02045 0f02da31d74ead9117cdb68d1df835a7 1069 Gene3D G3DSA:3.90.1570.50 98 260 7.9E-28 T 14-10-2018 C3497_02045 0f02da31d74ead9117cdb68d1df835a7 1069 Pfam PF04851 Type III restriction enzyme, res subunit 270 466 5.1E-13 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C3497_02045 0f02da31d74ead9117cdb68d1df835a7 1069 Gene3D G3DSA:3.40.50.300 300 484 7.6E-45 T 14-10-2018 C3497_13980 e813faef02f1ce16c3724d09932ca281 425 SUPERFAMILY SSF103473 8 379 3.4E-36 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_13980 e813faef02f1ce16c3724d09932ca281 425 Gene3D G3DSA:1.20.1250.20 199 383 3.4E-16 T 14-10-2018 C3497_13980 e813faef02f1ce16c3724d09932ca281 425 Pfam PF07690 Major Facilitator Superfamily 12 191 9.8E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_13980 e813faef02f1ce16c3724d09932ca281 425 Pfam PF07690 Major Facilitator Superfamily 205 375 8.6E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_13980 e813faef02f1ce16c3724d09932ca281 425 Gene3D G3DSA:1.20.1250.20 3 184 3.6E-10 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 479 485 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 ProSitePatterns PS01047 Heavy-metal-associated domain. 64 92 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 214 776 1.6E-182 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 Gene3D G3DSA:3.30.70.100 57 142 1.3E-17 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 SUPERFAMILY SSF55008 1 57 6.54E-13 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 249 755 2.1E-91 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 SUPERFAMILY SSF81653 280 377 1.7E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 Gene3D G3DSA:3.40.50.1000 458 726 8.6E-85 T 14-10-2018 IPR023214 HAD superfamily C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 Gene3D G3DSA:2.70.150.20 271 381 2.0E-38 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 Pfam PF00403 Heavy-metal-associated domain 1 54 1.1E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 Pfam PF00403 Heavy-metal-associated domain 62 120 2.4E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 SUPERFAMILY SSF55008 58 123 7.2E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 SUPERFAMILY SSF81665 228 749 4.05E-18 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 477 491 7.9E-28 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 709 7.9E-28 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 327 341 7.9E-28 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 631 7.9E-28 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 610 7.9E-28 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 674 693 7.9E-28 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 Gene3D G3DSA:3.30.70.100 1 56 6.2E-15 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 Pfam PF00122 E1-E2 ATPase 278 456 5.3E-55 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 SUPERFAMILY SSF56784 475 774 1.24E-59 T 14-10-2018 IPR036412 HAD-like superfamily C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 Pfam PF00702 haloacid dehalogenase-like hydrolase 475 688 5.4E-37 T 14-10-2018 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 Gene3D G3DSA:3.40.1110.10 488 606 8.6E-85 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C3497_09930 76d7268f3a919e3ecd56cc9473892543 783 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 195 777 2.1E-172 T 14-10-2018 C3497_07910 9ab8f60ca7510c6f1a06468b36b6255b 170 TIGRFAM TIGR01841 phasin: phasin family protein 27 111 1.1E-17 T 14-10-2018 IPR010127 Phasin, subfamily 1 C3497_07910 9ab8f60ca7510c6f1a06468b36b6255b 170 Pfam PF09361 Phasin protein 6 104 1.0E-26 T 14-10-2018 IPR018968 Phasin C3497_04255 a5db0a07765291b63d802e8378a80a61 205 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 31.378 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 C3497_04255 a5db0a07765291b63d802e8378a80a61 205 SUPERFAMILY SSF53335 27 200 5.26E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_04255 a5db0a07765291b63d802e8378a80a61 205 Gene3D G3DSA:3.40.50.150 27 205 4.6E-65 T 14-10-2018 C3497_04255 a5db0a07765291b63d802e8378a80a61 205 Pfam PF01728 FtsJ-like methyltransferase 28 201 1.7E-60 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 C3497_04255 a5db0a07765291b63d802e8378a80a61 205 PIRSF PIRSF005461 1 205 4.3E-78 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 Gene3D G3DSA:3.40.50.300 29 190 3.4E-40 T 14-10-2018 C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 18 244 6.4E-119 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 352 183.839 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 262 335 4.3E-31 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 Gene3D G3DSA:1.10.10.10 266 344 6.1E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 32 335 6.8E-146 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 SUPERFAMILY SSF46785 265 339 5.17E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 SUPERFAMILY SSF52540 29 259 1.22E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 259 340 6.0E-35 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 SMART SM00382 60 195 3.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_01360 4605b7cae3817019b4f7089a94f135e9 352 Gene3D G3DSA:1.10.8.60 191 265 1.2E-30 T 14-10-2018 C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 9.8E-143 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 SUPERFAMILY SSF52540 151 337 1.07E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 Pfam PF01926 50S ribosome-binding GTPase 161 285 1.2E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 PIRSF PIRSF002401 1 372 1.2E-136 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 Gene3D G3DSA:2.70.210.12 1 158 2.1E-60 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 SUPERFAMILY SSF82051 2 158 2.75E-58 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 Gene3D G3DSA:3.40.50.300 159 339 1.7E-52 T 14-10-2018 C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 Hamap MF_01454 GTPase Obg [obg]. 2 334 48.2 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 C3497_04765 c6a7926ef88698c7ef4ce4cfd43f3dfd 394 Pfam PF01018 GTP1/OBG 5 158 5.9E-60 T 14-10-2018 IPR006169 GTP1/OBG domain C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 Gene3D G3DSA:3.40.1440.10 10 106 7.1E-32 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 Gene3D G3DSA:1.10.150.20 550 604 1.9E-22 T 14-10-2018 C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 Pfam PF14520 Helix-hairpin-helix domain 553 603 3.9E-8 T 14-10-2018 C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 SUPERFAMILY SSF47781 501 604 2.0E-24 T 14-10-2018 IPR010994 RuvA domain 2-like C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 SUPERFAMILY SSF82771 22 104 8.11E-22 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 Pfam PF01541 GIY-YIG catalytic domain 22 97 3.9E-8 T 14-10-2018 IPR000305 GIY-YIG endonuclease C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 382 537 1.7E-52 T 14-10-2018 IPR001162 UvrC family homology region C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 SMART SM00465 21 102 1.8E-17 T 14-10-2018 IPR000305 GIY-YIG endonuclease C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 SMART SM00278 551 570 1.4 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 SMART SM00278 583 602 0.57 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 Gene3D G3DSA:3.30.420.340 374 547 1.0E-53 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 14 584 9.7E-179 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 602 27.829 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 Pfam PF02151 UvrB/uvrC motif 208 241 2.9E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 C3497_05565 8aa57b3383b84a4f8a9caccd9f77ae0b 604 SUPERFAMILY SSF46600 195 246 6.54E-13 T 14-10-2018 IPR036876 UVR domain superfamily C3497_00610 d2b2afd349fb2b0b87cfb1fea95bbb39 629 Gene3D G3DSA:3.30.450.20 97 245 6.8E-45 T 14-10-2018 C3497_00610 d2b2afd349fb2b0b87cfb1fea95bbb39 629 Gene3D G3DSA:1.10.287.950 272 601 4.2E-59 T 14-10-2018 C3497_00610 d2b2afd349fb2b0b87cfb1fea95bbb39 629 SUPERFAMILY SSF58104 294 600 8.5E-59 T 14-10-2018 C3497_00610 d2b2afd349fb2b0b87cfb1fea95bbb39 629 SMART SM00283 338 599 2.3E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_00610 d2b2afd349fb2b0b87cfb1fea95bbb39 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 412 564 4.6E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_00610 d2b2afd349fb2b0b87cfb1fea95bbb39 629 Pfam PF17200 Single Cache domain 2 99 245 1.2E-33 T 14-10-2018 IPR033480 Single Cache domain 2 C3497_00610 d2b2afd349fb2b0b87cfb1fea95bbb39 629 SMART SM01049 94 188 2.3E-28 T 14-10-2018 IPR033480 Single Cache domain 2 C3497_11500 81ee5e54f409636618484f2d5ae4e234 183 Gene3D G3DSA:2.60.450.10 23 173 2.2E-46 T 14-10-2018 C3497_11500 81ee5e54f409636618484f2d5ae4e234 183 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 21 170 4.5E-45 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 C3497_11500 81ee5e54f409636618484f2d5ae4e234 183 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 4 170 26.55 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 C3497_11500 81ee5e54f409636618484f2d5ae4e234 183 Pfam PF03968 OstA-like protein 31 142 2.9E-27 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 130 203 8.3E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 216 291 1.3E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 SUPERFAMILY SSF46626 215 296 1.19E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 34 297 1.8E-89 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 Gene3D G3DSA:1.10.760.10 184 271 2.6E-75 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 84 3.9E-22 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 PIRSF PIRSF000006 5 298 2.8E-94 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 PRINTS PR00605 Class IC cytochrome C signature 139 150 7.5E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 PRINTS PR00605 Class IC cytochrome C signature 181 203 7.5E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 SUPERFAMILY SSF46626 58 209 2.36E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 Gene3D G3DSA:1.20.58.1490 5 96 1.9E-28 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily C3497_10005 0811ed1005e58bcaf1d5e1dfe96f0739 298 Gene3D G3DSA:1.10.760.10 105 294 2.6E-75 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_01020 0034e412ab25758176642855c37ecd93 419 Gene3D G3DSA:3.50.50.60 4 302 9.0E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_01020 0034e412ab25758176642855c37ecd93 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 2.7E-25 T 14-10-2018 C3497_01020 0034e412ab25758176642855c37ecd93 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 2.7E-25 T 14-10-2018 C3497_01020 0034e412ab25758176642855c37ecd93 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.7E-25 T 14-10-2018 C3497_01020 0034e412ab25758176642855c37ecd93 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 2.7E-25 T 14-10-2018 C3497_01020 0034e412ab25758176642855c37ecd93 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.7E-25 T 14-10-2018 C3497_01020 0034e412ab25758176642855c37ecd93 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 1.2E-11 T 14-10-2018 C3497_01020 0034e412ab25758176642855c37ecd93 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.2E-11 T 14-10-2018 C3497_01020 0034e412ab25758176642855c37ecd93 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 1.2E-11 T 14-10-2018 C3497_01020 0034e412ab25758176642855c37ecd93 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 1.2E-11 T 14-10-2018 C3497_01020 0034e412ab25758176642855c37ecd93 419 SUPERFAMILY SSF51905 2 188 9.15E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_01020 0034e412ab25758176642855c37ecd93 419 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 283 3.0E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3497_01020 0034e412ab25758176642855c37ecd93 419 SUPERFAMILY SSF51905 143 310 1.14E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_01020 0034e412ab25758176642855c37ecd93 419 Gene3D G3DSA:3.50.50.60 111 238 9.0E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_01095 4a134f79007c20d05e13f91b9d10f756 353 SMART SM00342 259 341 3.2E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3497_01095 4a134f79007c20d05e13f91b9d10f756 353 Gene3D G3DSA:1.10.10.60 240 351 3.3E-26 T 14-10-2018 C3497_01095 4a134f79007c20d05e13f91b9d10f756 353 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 34 216 1.7E-53 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal C3497_01095 4a134f79007c20d05e13f91b9d10f756 353 Pfam PF12833 Helix-turn-helix domain 265 342 1.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3497_01095 4a134f79007c20d05e13f91b9d10f756 353 SUPERFAMILY SSF46689 295 343 5.38E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_01095 4a134f79007c20d05e13f91b9d10f756 353 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 325 2.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3497_01095 4a134f79007c20d05e13f91b9d10f756 353 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 325 341 2.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 SUPERFAMILY SSF54292 1 74 5.35E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 Gene3D G3DSA:3.40.228.10 345 409 9.2E-17 T 14-10-2018 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 Gene3D G3DSA:3.10.20.740 1 124 5.2E-42 T 14-10-2018 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 Gene3D G3DSA:3.30.70.20 125 204 2.7E-7 T 14-10-2018 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 Pfam PF00384 Molybdopterin oxidoreductase 272 632 7.6E-33 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 SUPERFAMILY SSF54862 75 210 3.31E-37 T 14-10-2018 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 SUPERFAMILY SSF50692 698 761 2.49E-5 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 632 2.1E-205 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 122 3.6E-16 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 SUPERFAMILY SSF53706 213 655 5.44E-88 T 14-10-2018 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 Gene3D G3DSA:3.40.50.740 280 344 9.2E-17 T 14-10-2018 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 Gene3D G3DSA:3.40.50.740 483 666 8.6E-20 T 14-10-2018 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 SMART SM00929 83 123 3.3E-20 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04420 74ec37a188f33afb92541cbc093a43f6 779 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 2.6E-20 T 14-10-2018 C3497_01965 ba575670ee757bd60c24a48c1d01405e 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.1E-26 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 C3497_01965 ba575670ee757bd60c24a48c1d01405e 72 SMART SM00316 4 72 1.4E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_01965 ba575670ee757bd60c24a48c1d01405e 72 Gene3D G3DSA:2.40.50.140 1 72 1.8E-37 T 14-10-2018 C3497_01965 ba575670ee757bd60c24a48c1d01405e 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 9.8E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 C3497_01965 ba575670ee757bd60c24a48c1d01405e 72 SUPERFAMILY SSF50249 1 70 5.14E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_01965 ba575670ee757bd60c24a48c1d01405e 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.656 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 C3497_00525 d1ca98ab547bfef22fa8d9cd4cc086e0 154 SUPERFAMILY SSF46785 21 145 2.99E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_00525 d1ca98ab547bfef22fa8d9cd4cc086e0 154 Pfam PF01475 Ferric uptake regulator family 25 116 1.7E-12 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 C3497_00525 d1ca98ab547bfef22fa8d9cd4cc086e0 154 Gene3D G3DSA:1.10.10.10 12 88 5.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_00525 d1ca98ab547bfef22fa8d9cd4cc086e0 154 Gene3D G3DSA:3.30.1490.190 99 154 1.5E-7 T 14-10-2018 C3497_05895 ea7c185a0e7955b5cdb71cff81574ee1 197 Pfam PF14279 HNH endonuclease 101 155 1.9E-19 T 14-10-2018 IPR029471 HNH endonuclease 5 C3497_05895 ea7c185a0e7955b5cdb71cff81574ee1 197 Gene3D G3DSA:3.30.40.60 62 174 2.1E-23 T 14-10-2018 C3497_05895 ea7c185a0e7955b5cdb71cff81574ee1 197 SMART SM00507 88 141 2.0E-11 T 14-10-2018 IPR003615 HNH nuclease C3497_06850 93d17726c05ec009061889c77cbc673b 114 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 3 110 1.8E-56 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 C3497_06850 93d17726c05ec009061889c77cbc673b 114 PRINTS PR00355 Adrenodoxin signature 60 74 4.6E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C3497_06850 93d17726c05ec009061889c77cbc673b 114 PRINTS PR00355 Adrenodoxin signature 42 52 4.6E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C3497_06850 93d17726c05ec009061889c77cbc673b 114 PRINTS PR00355 Adrenodoxin signature 83 91 4.6E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C3497_06850 93d17726c05ec009061889c77cbc673b 114 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C3497_06850 93d17726c05ec009061889c77cbc673b 114 SUPERFAMILY SSF54292 4 108 2.63E-31 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3497_06850 93d17726c05ec009061889c77cbc673b 114 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 91 2.0E-13 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C3497_06850 93d17726c05ec009061889c77cbc673b 114 Gene3D G3DSA:3.10.20.30 1 113 2.5E-34 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_04735 3a1af56c45b0bd9cf3c1acd2e58c3b25 404 Pfam PF02687 FtsX-like permease family 297 394 1.6E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3497_04735 3a1af56c45b0bd9cf3c1acd2e58c3b25 404 Pfam PF12704 MacB-like periplasmic core domain 17 238 5.2E-16 T 14-10-2018 IPR025857 MacB-like periplasmic core domain C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 PIRSF PIRSF005925 178 307 5.0E-13 T 14-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 PIRSF PIRSF005925 301 733 1.5E-144 T 14-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 SUPERFAMILY SSF55785 193 300 2.27E-29 T 14-10-2018 IPR035965 PAS domain superfamily C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 SMART SM00091 188 254 2.2E-8 T 14-10-2018 IPR000014 PAS domain C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 Pfam PF00571 CBS domain 55 99 2.1E-5 T 14-10-2018 IPR000644 CBS domain C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 Pfam PF00571 CBS domain 107 159 0.0075 T 14-10-2018 IPR000644 CBS domain C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 Pfam PF00990 Diguanylate cyclase, GGDEF domain 313 469 1.5E-56 T 14-10-2018 IPR000160 GGDEF domain C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 Gene3D G3DSA:3.30.450.20 179 310 1.2E-37 T 14-10-2018 C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 SUPERFAMILY SSF55073 318 476 1.44E-55 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 310 472 3.8E-47 T 14-10-2018 IPR000160 GGDEF domain C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 Gene3D G3DSA:3.10.580.10 47 173 9.6E-20 T 14-10-2018 C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 Gene3D G3DSA:3.30.70.270 311 487 9.8E-71 T 14-10-2018 C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 Pfam PF13426 PAS domain 199 301 1.1E-20 T 14-10-2018 IPR000014 PAS domain C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 SMART SM00086 260 302 8.6E-6 T 14-10-2018 IPR001610 PAC motif C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 Gene3D G3DSA:3.20.20.450 488 735 1.5E-104 T 14-10-2018 IPR035919 EAL domain superfamily C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 191 308 7.6E-22 T 14-10-2018 IPR000014 PAS domain C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 SUPERFAMILY SSF54631 52 160 1.52E-18 T 14-10-2018 C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 SMART SM00267 302 474 9.2E-75 T 14-10-2018 IPR000160 GGDEF domain C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 SUPERFAMILY SSF141868 489 732 4.71E-92 T 14-10-2018 IPR035919 EAL domain superfamily C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 SMART SM00052 484 730 1.3E-117 T 14-10-2018 IPR001633 EAL domain C3497_07125 fe77adc076a69762b7d084e32e11ee35 737 Pfam PF00563 EAL domain 490 725 2.6E-74 T 14-10-2018 IPR001633 EAL domain C3497_07305 1e3cf630e1d842011e83997dbbf5df68 202 Pfam PF01351 Ribonuclease HII 10 186 2.8E-40 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain C3497_07305 1e3cf630e1d842011e83997dbbf5df68 202 Hamap MF_00052_B Ribonuclease HII [rnhB]. 8 187 37.111 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 C3497_07305 1e3cf630e1d842011e83997dbbf5df68 202 SUPERFAMILY SSF53098 6 194 3.49E-67 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_07305 1e3cf630e1d842011e83997dbbf5df68 202 Gene3D G3DSA:3.30.420.10 2 197 5.3E-72 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 Gene3D G3DSA:1.20.1270.10 525 619 3.1E-30 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 SUPERFAMILY SSF100934 508 619 1.37E-36 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 Gene3D G3DSA:3.90.640.10 237 314 1.2E-114 T 14-10-2018 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 Pfam PF00012 Hsp70 protein 22 603 1.6E-180 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 SUPERFAMILY SSF53067 200 379 4.43E-50 T 14-10-2018 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 Gene3D G3DSA:3.30.420.40 23 377 1.2E-114 T 14-10-2018 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 Gene3D G3DSA:2.60.34.10 382 524 2.7E-46 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 620 43.608 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 1.2E-278 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 SUPERFAMILY SSF53067 19 195 7.34E-52 T 14-10-2018 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.9E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 PRINTS PR00301 70kDa heat shock protein signature 151 171 3.9E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 PRINTS PR00301 70kDa heat shock protein signature 210 220 3.9E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 PRINTS PR00301 70kDa heat shock protein signature 363 383 3.9E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 PRINTS PR00301 70kDa heat shock protein signature 332 348 3.9E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 PRINTS PR00301 70kDa heat shock protein signature 389 408 3.9E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 PRINTS PR00301 70kDa heat shock protein signature 470 486 3.9E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 PRINTS PR00301 70kDa heat shock protein signature 48 60 3.9E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 Gene3D G3DSA:3.30.420.40 193 364 1.2E-114 T 14-10-2018 C3497_06855 3a67f827a9ac2a6d74c6c65625ded3ed 622 SUPERFAMILY SSF100920 386 540 3.4E-48 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.0E-159 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 Gene3D G3DSA:3.30.1490.20 21 104 7.0E-95 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 SUPERFAMILY SSF56059 1 238 4.12E-83 T 14-10-2018 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 Gene3D G3DSA:3.40.50.261 240 386 1.0E-57 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.272 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 PIRSF PIRSF001554 1 386 9.7E-150 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 Gene3D G3DSA:3.30.470.20 1 234 7.0E-95 T 14-10-2018 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 Pfam PF00549 CoA-ligase 262 381 4.5E-27 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 SUPERFAMILY SSF52210 239 385 1.44E-53 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_11335 f17a79569fd1b5af20e932402d3fa409 386 Pfam PF08442 ATP-grasp domain 2 202 2.6E-80 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 Hamap MF_01465 Protein translocase subunit SecY [secY]. 8 428 30.156 T 14-10-2018 IPR026593 Protein translocase subunit SecY C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 PIRSF PIRSF004557 6 435 4.1E-125 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 2.0E-95 T 14-10-2018 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 21 39 2.0E-95 T 14-10-2018 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 2.0E-95 T 14-10-2018 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 2.0E-95 T 14-10-2018 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 2.0E-95 T 14-10-2018 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 2.0E-95 T 14-10-2018 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 2.0E-95 T 14-10-2018 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 2.0E-95 T 14-10-2018 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 2.0E-95 T 14-10-2018 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 18 424 4.3E-134 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 Gene3D G3DSA:1.10.3370.10 7 424 2.7E-166 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 Pfam PF00344 SecY translocase 74 412 9.0E-120 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 SUPERFAMILY SSF103491 12 419 8.89E-134 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3497_01960 bbff9676b450970f0fd2f83ec43dff07 441 ProSitePatterns PS00756 Protein secY signature 2. 168 185 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 ProSitePatterns PS00164 Enolase signature. 334 347 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 SMART SM01193 4 134 1.3E-96 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 SMART SM01192 139 425 1.5E-211 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 SUPERFAMILY SSF54826 3 136 8.59E-57 T 14-10-2018 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 424 5.0E-204 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 Gene3D G3DSA:3.20.20.120 128 429 7.3E-130 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 PRINTS PR00148 Enolase signature 311 322 3.2E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 PRINTS PR00148 Enolase signature 334 348 3.2E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 PRINTS PR00148 Enolase signature 107 123 3.2E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 PRINTS PR00148 Enolase signature 37 51 3.2E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 PRINTS PR00148 Enolase signature 161 174 3.2E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 PRINTS PR00148 Enolase signature 363 380 3.2E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 Gene3D G3DSA:3.30.390.10 1 127 1.7E-57 T 14-10-2018 IPR029017 Enolase-like, N-terminal C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 422 3.9E-127 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 SUPERFAMILY SSF51604 139 426 2.83E-123 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 Hamap MF_00318 Enolase [eno]. 2 411 44.205 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 PIRSF PIRSF001400 1 425 1.2E-187 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_07495 33ecba107ebe3ddd38f73326dcb1d81d 429 Pfam PF03952 Enolase, N-terminal domain 4 133 1.9E-60 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_14345 f1729394d4a894b020659ccb4270d775 360 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C3497_14345 f1729394d4a894b020659ccb4270d775 360 Gene3D G3DSA:3.20.20.210 1 360 7.9E-154 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C3497_14345 f1729394d4a894b020659ccb4270d775 360 SUPERFAMILY SSF51726 4 352 2.09E-114 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C3497_14345 f1729394d4a894b020659ccb4270d775 360 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 349 2.5E-131 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C3497_14345 f1729394d4a894b020659ccb4270d775 360 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 8.9E-124 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C3497_14345 f1729394d4a894b020659ccb4270d775 360 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C3497_14345 f1729394d4a894b020659ccb4270d775 360 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 351 49.051 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 Gene3D G3DSA:3.40.50.720 1 246 9.8E-86 T 14-10-2018 C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 Pfam PF00106 short chain dehydrogenase 4 197 6.1E-66 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 SUPERFAMILY SSF51735 3 245 1.11E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 1.6E-122 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 C3497_03940 e649c30c4931e238dc884a6e517af1d9 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 8.8E-5 T 14-10-2018 C3497_08310 9841585ef867856ae0df6be7cd9365ed 333 SUPERFAMILY SSF46626 27 176 5.23E-48 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08310 9841585ef867856ae0df6be7cd9365ed 333 Pfam PF03150 Di-haem cytochrome c peroxidase 42 188 3.2E-50 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 C3497_08310 9841585ef867856ae0df6be7cd9365ed 333 Pfam PF00034 Cytochrome c 197 306 8.6E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_08310 9841585ef867856ae0df6be7cd9365ed 333 Gene3D G3DSA:1.10.760.10 41 188 4.2E-113 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08310 9841585ef867856ae0df6be7cd9365ed 333 SUPERFAMILY SSF46626 175 325 4.61E-43 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08310 9841585ef867856ae0df6be7cd9365ed 333 PIRSF PIRSF000294 4 330 3.6E-131 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 C3497_08310 9841585ef867856ae0df6be7cd9365ed 333 Gene3D G3DSA:1.10.760.10 189 312 4.2E-113 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_10280 59c747067817fb7d13f301904ff7dd83 411 Pfam PF00482 Type II secretion system (T2SS), protein F 77 200 5.4E-33 T 14-10-2018 IPR018076 Type II secretion system F domain C3497_10280 59c747067817fb7d13f301904ff7dd83 411 Pfam PF00482 Type II secretion system (T2SS), protein F 281 403 6.1E-29 T 14-10-2018 IPR018076 Type II secretion system F domain C3497_10280 59c747067817fb7d13f301904ff7dd83 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 172 200 6.7E-19 T 14-10-2018 IPR003004 GspF/PilC family C3497_10280 59c747067817fb7d13f301904ff7dd83 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 392 411 6.7E-19 T 14-10-2018 IPR003004 GspF/PilC family C3497_10280 59c747067817fb7d13f301904ff7dd83 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 73 85 6.7E-19 T 14-10-2018 IPR003004 GspF/PilC family C3497_10280 59c747067817fb7d13f301904ff7dd83 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 376 390 6.7E-19 T 14-10-2018 IPR003004 GspF/PilC family C3497_10280 59c747067817fb7d13f301904ff7dd83 411 Gene3D G3DSA:1.20.81.30 63 179 2.2E-32 T 14-10-2018 C3497_10280 59c747067817fb7d13f301904ff7dd83 411 Gene3D G3DSA:1.20.81.30 264 374 4.7E-30 T 14-10-2018 C3497_10280 59c747067817fb7d13f301904ff7dd83 411 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 172 200 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 SUPERFAMILY SSF51735 232 375 7.88E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 Pfam PF02254 TrkA-N domain 235 349 5.2E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 Pfam PF02254 TrkA-N domain 3 107 2.2E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 SUPERFAMILY SSF116726 135 222 1.96E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 Gene3D G3DSA:3.30.70.1450 139 231 1.2E-22 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.3E-24 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.3E-24 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.3E-24 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.3E-24 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.3E-24 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 Pfam PF02080 TrkA-C domain 161 224 7.5E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 Pfam PF02080 TrkA-C domain 388 460 3.0E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 SUPERFAMILY SSF51735 2 150 1.04E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 Gene3D G3DSA:3.40.50.720 2 138 6.8E-43 T 14-10-2018 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 SUPERFAMILY SSF116726 362 455 1.19E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 Gene3D G3DSA:3.40.50.720 232 365 2.4E-33 T 14-10-2018 C3497_14355 98e8b64a5f39a7ecae5fb51f5b88e34f 467 Gene3D G3DSA:3.30.70.1450 366 467 4.5E-32 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_12745 d02cdc7016a2118c043fa00c417ab8f2 283 Gene3D G3DSA:3.40.1010.10 15 131 8.5E-46 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3497_12745 d02cdc7016a2118c043fa00c417ab8f2 283 SUPERFAMILY SSF53790 12 259 1.83E-82 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3497_12745 d02cdc7016a2118c043fa00c417ab8f2 283 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 228 2.7E-53 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3497_12745 d02cdc7016a2118c043fa00c417ab8f2 283 Gene3D G3DSA:3.30.950.10 132 280 1.4E-50 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3497_12745 d02cdc7016a2118c043fa00c417ab8f2 283 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 96 129 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_12745 d02cdc7016a2118c043fa00c417ab8f2 283 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 21 35 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_12745 d02cdc7016a2118c043fa00c417ab8f2 283 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 16 249 1.3E-92 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 486 1.4E-224 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 3.4E-26 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 SUPERFAMILY SSF51971 374 481 1.0E-10 T 14-10-2018 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 Gene3D G3DSA:1.10.1060.10 9 143 1.2E-25 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 SUPERFAMILY SSF51971 142 410 2.0E-69 T 14-10-2018 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 Gene3D G3DSA:3.50.50.60 263 409 5.4E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 Gene3D G3DSA:3.40.50.720 144 262 4.1E-17 T 14-10-2018 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 SUPERFAMILY SSF46548 2 154 1.36E-42 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 468 3.7E-28 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 8.8E-21 T 14-10-2018 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 8.8E-21 T 14-10-2018 C3497_00385 1bc2ca0e4235ff9ce6e2450959aaa399 487 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 8.8E-21 T 14-10-2018 C3497_01945 133190f286e3b47a60f03cf9d99a01d2 174 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 171 33.674 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3497_01945 133190f286e3b47a60f03cf9d99a01d2 174 ProSitePatterns PS00585 Ribosomal protein S5 signature. 36 68 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site C3497_01945 133190f286e3b47a60f03cf9d99a01d2 174 SUPERFAMILY SSF54211 87 167 2.3E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_01945 133190f286e3b47a60f03cf9d99a01d2 174 Pfam PF00333 Ribosomal protein S5, N-terminal domain 19 83 6.6E-24 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 C3497_01945 133190f286e3b47a60f03cf9d99a01d2 174 Gene3D G3DSA:3.30.160.20 10 80 1.3E-24 T 14-10-2018 C3497_01945 133190f286e3b47a60f03cf9d99a01d2 174 Gene3D G3DSA:3.30.230.10 82 174 6.2E-37 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_01945 133190f286e3b47a60f03cf9d99a01d2 174 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 18 171 4.5E-62 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3497_01945 133190f286e3b47a60f03cf9d99a01d2 174 SUPERFAMILY SSF54768 15 84 1.15E-20 T 14-10-2018 C3497_01945 133190f286e3b47a60f03cf9d99a01d2 174 Pfam PF03719 Ribosomal protein S5, C-terminal domain 95 165 8.9E-30 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 Gene3D G3DSA:1.10.287.130 207 277 4.3E-25 T 14-10-2018 C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 SUPERFAMILY SSF47384 197 278 3.34E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 99 430 3.1E-131 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 Gene3D G3DSA:3.30.565.10 282 433 3.2E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 SUPERFAMILY SSF55785 95 202 2.09E-9 T 14-10-2018 IPR035965 PAS domain superfamily C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 210 278 8.0E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 SMART SM00091 103 169 5.0E-4 T 14-10-2018 IPR000014 PAS domain C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 Pfam PF11808 Domain of unknown function (DUF3329) 10 89 9.8E-7 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 432 3.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 SMART SM00388 210 278 1.2E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 SMART SM00387 322 434 2.7E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 SUPERFAMILY SSF55874 267 432 1.44E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_13225 4ea39396099ab375cc4f6627a1e89f49 438 Gene3D G3DSA:3.30.450.20 92 206 4.4E-10 T 14-10-2018 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 350 374 6.6E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 6.6E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 6.6E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 440 461 6.6E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 402 418 6.6E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 313 321 6.6E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 474 492 6.6E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 6.6E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 335 347 6.6E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 500 1.8E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PIRSF PIRSF000238 1 517 6.2E-265 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 SUPERFAMILY SSF52833 1 101 4.25E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 2.4E-40 T 14-10-2018 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 312 330 2.4E-40 T 14-10-2018 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 438 454 2.4E-40 T 14-10-2018 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 372 2.4E-40 T 14-10-2018 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 464 486 2.4E-40 T 14-10-2018 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 513 3.3E-247 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 342 362 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 Gene3D G3DSA:3.50.50.60 324 446 8.2E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 Pfam PF13192 Thioredoxin domain 125 192 1.5E-7 T 14-10-2018 IPR012336 Thioredoxin-like fold C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 SUPERFAMILY SSF51905 204 510 3.27E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 Gene3D G3DSA:3.50.50.60 213 504 8.2E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 SUPERFAMILY SSF52833 104 197 1.87E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_02620 8bbf3b5e5ecd2575dda8c447e5279148 519 Gene3D G3DSA:3.40.30.80 1 200 2.2E-64 T 14-10-2018 C3497_14090 37c774fe415c4ab1cd0d194539b21f10 210 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 207 1.5E-23 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 C3497_14090 37c774fe415c4ab1cd0d194539b21f10 210 Gene3D G3DSA:3.30.70.1210 96 207 1.3E-26 T 14-10-2018 C3497_14090 37c774fe415c4ab1cd0d194539b21f10 210 Gene3D G3DSA:3.30.70.1200 1 89 1.4E-20 T 14-10-2018 C3497_14090 37c774fe415c4ab1cd0d194539b21f10 210 SUPERFAMILY SSF117987 97 207 3.66E-27 T 14-10-2018 C3497_14090 37c774fe415c4ab1cd0d194539b21f10 210 SMART SM01101 1 207 3.7E-52 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 C3497_14090 37c774fe415c4ab1cd0d194539b21f10 210 Pfam PF08798 CRISPR associated protein 1 207 9.3E-49 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 C3497_14090 37c774fe415c4ab1cd0d194539b21f10 210 SUPERFAMILY SSF117987 1 86 9.42E-18 T 14-10-2018 C3497_14375 704e9089b1aa3eb097a417013a329da6 490 Gene3D G3DSA:3.30.70.1170 239 294 1.7E-12 T 14-10-2018 C3497_14375 704e9089b1aa3eb097a417013a329da6 490 Pfam PF01029 NusB family 101 192 9.8E-7 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 C3497_14375 704e9089b1aa3eb097a417013a329da6 490 Gene3D G3DSA:1.10.940.10 73 209 1.9E-18 T 14-10-2018 IPR035926 NusB-like superfamily C3497_14375 704e9089b1aa3eb097a417013a329da6 490 Gene3D G3DSA:1.10.287.730 212 238 2.6E-5 T 14-10-2018 C3497_14375 704e9089b1aa3eb097a417013a329da6 490 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 81 489 4.8E-97 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 C3497_14375 704e9089b1aa3eb097a417013a329da6 490 SUPERFAMILY SSF48013 80 215 4.58E-18 T 14-10-2018 IPR035926 NusB-like superfamily C3497_14375 704e9089b1aa3eb097a417013a329da6 490 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 325 1.1E-24 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3497_14375 704e9089b1aa3eb097a417013a329da6 490 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 286 300 1.1E-24 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3497_14375 704e9089b1aa3eb097a417013a329da6 490 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 430 446 1.1E-24 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3497_14375 704e9089b1aa3eb097a417013a329da6 490 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 380 392 1.1E-24 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3497_14375 704e9089b1aa3eb097a417013a329da6 490 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 471 488 1.1E-24 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3497_14375 704e9089b1aa3eb097a417013a329da6 490 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 379 390 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 C3497_14375 704e9089b1aa3eb097a417013a329da6 490 Gene3D G3DSA:3.40.50.150 295 489 7.8E-58 T 14-10-2018 C3497_14375 704e9089b1aa3eb097a417013a329da6 490 SUPERFAMILY SSF53335 205 488 9.91E-66 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_14375 704e9089b1aa3eb097a417013a329da6 490 Pfam PF01189 16S rRNA methyltransferase RsmB/F 305 486 7.0E-54 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 C3497_00025 25281d4bf83cfe321e19e7ad2d8ba96e 172 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 C3497_00025 25281d4bf83cfe321e19e7ad2d8ba96e 172 Pfam PF00691 OmpA family 67 162 2.1E-19 T 14-10-2018 IPR006665 OmpA-like domain C3497_00025 25281d4bf83cfe321e19e7ad2d8ba96e 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 65 168 3.8E-42 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 C3497_00025 25281d4bf83cfe321e19e7ad2d8ba96e 172 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 1 168 28.579 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 C3497_00025 25281d4bf83cfe321e19e7ad2d8ba96e 172 SUPERFAMILY SSF103088 57 163 5.89E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_00025 25281d4bf83cfe321e19e7ad2d8ba96e 172 Gene3D G3DSA:3.30.1330.60 49 169 2.0E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_00025 25281d4bf83cfe321e19e7ad2d8ba96e 172 PRINTS PR01021 OMPA domain signature 98 113 2.1E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_00025 25281d4bf83cfe321e19e7ad2d8ba96e 172 PRINTS PR01021 OMPA domain signature 68 90 2.1E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_00025 25281d4bf83cfe321e19e7ad2d8ba96e 172 PRINTS PR01021 OMPA domain signature 113 129 2.1E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_00585 1c2474529b2e91627f814e163bb94bc5 216 Gene3D G3DSA:3.40.50.300 2 210 6.0E-54 T 14-10-2018 C3497_00585 1c2474529b2e91627f814e163bb94bc5 216 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_00585 1c2474529b2e91627f814e163bb94bc5 216 SUPERFAMILY SSF52540 3 209 1.36E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00585 1c2474529b2e91627f814e163bb94bc5 216 SMART SM00382 29 213 4.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00585 1c2474529b2e91627f814e163bb94bc5 216 Pfam PF00005 ABC transporter 21 167 6.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_08545 25dc5a1f30fc6ec0c40ab4b20c578b60 377 Pfam PF01609 Transposase DDE domain 107 344 4.8E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_08545 25dc5a1f30fc6ec0c40ab4b20c578b60 377 Pfam PF13808 DDE_Tnp_1-associated 11 97 1.3E-31 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C3497_04995 25dc5a1f30fc6ec0c40ab4b20c578b60 377 Pfam PF01609 Transposase DDE domain 107 344 4.8E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_04995 25dc5a1f30fc6ec0c40ab4b20c578b60 377 Pfam PF13808 DDE_Tnp_1-associated 11 97 1.3E-31 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C3497_00285 25dc5a1f30fc6ec0c40ab4b20c578b60 377 Pfam PF01609 Transposase DDE domain 107 344 4.8E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_00285 25dc5a1f30fc6ec0c40ab4b20c578b60 377 Pfam PF13808 DDE_Tnp_1-associated 11 97 1.3E-31 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C3497_14110 25dc5a1f30fc6ec0c40ab4b20c578b60 377 Pfam PF01609 Transposase DDE domain 107 344 4.8E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_14110 25dc5a1f30fc6ec0c40ab4b20c578b60 377 Pfam PF13808 DDE_Tnp_1-associated 11 97 1.3E-31 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C3497_12875 25dc5a1f30fc6ec0c40ab4b20c578b60 377 Pfam PF01609 Transposase DDE domain 107 344 4.8E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_12875 25dc5a1f30fc6ec0c40ab4b20c578b60 377 Pfam PF13808 DDE_Tnp_1-associated 11 97 1.3E-31 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C3497_02555 113edf2abfecd808adc81d07fb15d2ed 196 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 11 193 8.2E-26 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 C3497_02555 113edf2abfecd808adc81d07fb15d2ed 196 Pfam PF03550 Outer membrane lipoprotein LolB 43 192 4.8E-40 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 C3497_02555 113edf2abfecd808adc81d07fb15d2ed 196 Gene3D G3DSA:2.50.20.10 32 194 3.6E-38 T 14-10-2018 C3497_02555 113edf2abfecd808adc81d07fb15d2ed 196 SUPERFAMILY SSF89392 23 194 5.1E-37 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX C3497_02555 113edf2abfecd808adc81d07fb15d2ed 196 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 7 194 20.431 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 C3497_01685 c5b0529209a28429be6bc014dec65853 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 135 290 1.1E-39 T 14-10-2018 IPR000160 GGDEF domain C3497_01685 c5b0529209a28429be6bc014dec65853 571 Gene3D G3DSA:3.20.20.450 309 564 4.1E-104 T 14-10-2018 IPR035919 EAL domain superfamily C3497_01685 c5b0529209a28429be6bc014dec65853 571 SUPERFAMILY SSF55073 139 297 5.96E-39 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_01685 c5b0529209a28429be6bc014dec65853 571 SMART SM00267 124 296 8.4E-46 T 14-10-2018 IPR000160 GGDEF domain C3497_01685 c5b0529209a28429be6bc014dec65853 571 Gene3D G3DSA:3.30.450.20 24 119 1.7E-8 T 14-10-2018 C3497_01685 c5b0529209a28429be6bc014dec65853 571 SMART SM00052 306 554 1.0E-114 T 14-10-2018 IPR001633 EAL domain C3497_01685 c5b0529209a28429be6bc014dec65853 571 SUPERFAMILY SSF141868 313 560 1.02E-89 T 14-10-2018 IPR035919 EAL domain superfamily C3497_01685 c5b0529209a28429be6bc014dec65853 571 Pfam PF00563 EAL domain 313 549 8.2E-78 T 14-10-2018 IPR001633 EAL domain C3497_01685 c5b0529209a28429be6bc014dec65853 571 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 294 2.7E-28 T 14-10-2018 IPR000160 GGDEF domain C3497_01685 c5b0529209a28429be6bc014dec65853 571 SUPERFAMILY SSF55785 24 111 1.05E-8 T 14-10-2018 IPR035965 PAS domain superfamily C3497_01685 c5b0529209a28429be6bc014dec65853 571 Gene3D G3DSA:3.30.70.270 133 308 1.4E-45 T 14-10-2018 C3497_02070 00b99dc73b692cbcae68f97d5b6123ff 348 SUPERFAMILY SSF111369 42 272 9.15E-29 T 14-10-2018 C3497_02070 00b99dc73b692cbcae68f97d5b6123ff 348 Gene3D G3DSA:2.40.420.20 33 332 7.9E-63 T 14-10-2018 C3497_02070 00b99dc73b692cbcae68f97d5b6123ff 348 Gene3D G3DSA:2.40.30.170 41 273 7.9E-63 T 14-10-2018 C3497_02070 00b99dc73b692cbcae68f97d5b6123ff 348 Gene3D G3DSA:1.10.287.470 87 158 7.9E-63 T 14-10-2018 C3497_02070 00b99dc73b692cbcae68f97d5b6123ff 348 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 28 337 5.4E-60 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_02070 00b99dc73b692cbcae68f97d5b6123ff 348 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 267 8.2E-23 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3497_02070 00b99dc73b692cbcae68f97d5b6123ff 348 Gene3D G3DSA:2.40.50.100 53 193 7.9E-63 T 14-10-2018 C3497_14700 b46c326049661c53e05d67f704bf964b 326 SUPERFAMILY SSF48150 127 306 6.8E-38 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 C3497_14700 b46c326049661c53e05d67f704bf964b 326 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 144 283 2.3E-10 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C3497_14700 b46c326049661c53e05d67f704bf964b 326 Gene3D G3DSA:1.10.340.30 134 256 7.1E-44 T 14-10-2018 C3497_14700 b46c326049661c53e05d67f704bf964b 326 SMART SM01009 20 136 4.4E-9 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal C3497_14700 b46c326049661c53e05d67f704bf964b 326 SMART SM00478 146 309 3.5E-13 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C3497_14700 b46c326049661c53e05d67f704bf964b 326 Pfam PF06029 AlkA N-terminal domain 31 134 1.7E-6 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal C3497_14700 b46c326049661c53e05d67f704bf964b 326 Gene3D G3DSA:1.10.1670.40 114 306 7.1E-44 T 14-10-2018 C3497_07420 5b13ca150cb1bba8e52f18bfeb69336b 277 Pfam PF00494 Squalene/phytoene synthase 5 260 9.3E-63 T 14-10-2018 C3497_07420 5b13ca150cb1bba8e52f18bfeb69336b 277 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 2 271 1.5E-111 T 14-10-2018 IPR017827 Hydroxysqualene synthase HpnC MetaCyc: PWY-7072 C3497_07420 5b13ca150cb1bba8e52f18bfeb69336b 277 SUPERFAMILY SSF48576 4 275 2.73E-74 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3497_07420 5b13ca150cb1bba8e52f18bfeb69336b 277 Gene3D G3DSA:1.10.600.10 2 252 3.7E-80 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3497_06350 a12a89252aea16f3481ec42a71f58d26 307 PRINTS PR01270 Histone deacetylase superfamily signature 115 138 4.6E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C3497_06350 a12a89252aea16f3481ec42a71f58d26 307 PRINTS PR01270 Histone deacetylase superfamily signature 149 164 4.6E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C3497_06350 a12a89252aea16f3481ec42a71f58d26 307 PRINTS PR01270 Histone deacetylase superfamily signature 223 233 4.6E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C3497_06350 a12a89252aea16f3481ec42a71f58d26 307 Gene3D G3DSA:3.40.800.20 5 305 4.4E-66 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C3497_06350 a12a89252aea16f3481ec42a71f58d26 307 SUPERFAMILY SSF52768 3 280 1.2E-79 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily C3497_06350 a12a89252aea16f3481ec42a71f58d26 307 Pfam PF00850 Histone deacetylase domain 22 281 1.6E-47 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C3497_06905 47a95ad687252752bf34d84dd9499926 865 ProSitePatterns PS00450 Aconitase family signature 1. 707 724 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C3497_06905 47a95ad687252752bf34d84dd9499926 865 Pfam PF00330 Aconitase family (aconitate hydratase) 476 822 5.0E-38 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06905 47a95ad687252752bf34d84dd9499926 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 857 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3497_06905 47a95ad687252752bf34d84dd9499926 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 4.9E-63 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3497_06905 47a95ad687252752bf34d84dd9499926 865 SUPERFAMILY SSF52016 163 374 4.45E-65 T 14-10-2018 C3497_06905 47a95ad687252752bf34d84dd9499926 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 384 5.5E-93 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3497_06905 47a95ad687252752bf34d84dd9499926 865 Gene3D G3DSA:1.25.40.310 1 161 3.6E-66 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3497_06905 47a95ad687252752bf34d84dd9499926 865 Gene3D G3DSA:3.30.499.10 407 534 6.1E-151 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C3497_06905 47a95ad687252752bf34d84dd9499926 865 Gene3D G3DSA:3.30.499.10 688 865 2.6E-64 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C3497_06905 47a95ad687252752bf34d84dd9499926 865 Gene3D G3DSA:3.20.19.10 163 363 7.1E-68 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 C3497_06905 47a95ad687252752bf34d84dd9499926 865 Gene3D G3DSA:3.40.1060.10 387 686 6.1E-151 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C3497_06905 47a95ad687252752bf34d84dd9499926 865 SUPERFAMILY SSF53732 381 859 5.49E-146 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 C3497_06905 47a95ad687252752bf34d84dd9499926 865 PIRSF PIRSF036687 1 863 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3497_06905 47a95ad687252752bf34d84dd9499926 865 SUPERFAMILY SSF74778 2 160 8.37E-66 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3497_13015 d8a9f7598a51ead6d338c8f26d39a1a2 327 SUPERFAMILY SSF111369 36 207 1.24E-19 T 14-10-2018 C3497_13015 d8a9f7598a51ead6d338c8f26d39a1a2 327 Gene3D G3DSA:2.40.420.20 260 285 9.9E-37 T 14-10-2018 C3497_13015 d8a9f7598a51ead6d338c8f26d39a1a2 327 Gene3D G3DSA:1.10.287.470 78 151 9.9E-37 T 14-10-2018 C3497_13015 d8a9f7598a51ead6d338c8f26d39a1a2 327 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 205 3.4E-12 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3497_13015 d8a9f7598a51ead6d338c8f26d39a1a2 327 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 280 3.9E-38 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_13015 d8a9f7598a51ead6d338c8f26d39a1a2 327 Gene3D G3DSA:2.40.50.100 44 190 9.9E-37 T 14-10-2018 C3497_13015 d8a9f7598a51ead6d338c8f26d39a1a2 327 Gene3D G3DSA:2.40.30.170 38 259 9.9E-37 T 14-10-2018 C3497_02820 f942697d8f416712bd3b01686920818e 420 Pfam PF01145 SPFH domain / Band 7 family 96 280 9.5E-25 T 14-10-2018 IPR001107 Band 7 domain C3497_02820 f942697d8f416712bd3b01686920818e 420 Pfam PF12221 Bacterial membrane protein N terminal 1 48 7.8E-14 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal C3497_02820 f942697d8f416712bd3b01686920818e 420 Gene3D G3DSA:3.30.479.30 148 256 3.0E-18 T 14-10-2018 C3497_02820 f942697d8f416712bd3b01686920818e 420 SUPERFAMILY SSF117892 159 272 8.37E-18 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily C3497_02820 f942697d8f416712bd3b01686920818e 420 SMART SM00244 92 265 1.2E-23 T 14-10-2018 IPR001107 Band 7 domain C3497_02820 f942697d8f416712bd3b01686920818e 420 TIGRFAM TIGR01933 hflK: HflK protein 94 367 1.9E-95 T 14-10-2018 IPR010201 HflK GO:0016021 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 615 638 1.6E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 438 457 1.6E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 573 584 1.6E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 681 704 1.6E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 653 675 1.6E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 757 784 1.6E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 SUPERFAMILY SSF48168 155 361 7.72E-55 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 746 768 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 Gene3D G3DSA:3.20.70.20 267 906 5.5E-243 T 14-10-2018 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 Pfam PF02867 Ribonucleotide reductase, barrel domain 363 902 2.9E-180 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 286 359 1.3E-22 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 289 905 1.7E-211 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 SUPERFAMILY SSF51998 362 905 2.01E-182 T 14-10-2018 C3497_08085 047cbb2c27ecdf578a0a58caf80b4b06 939 Pfam PF03477 ATP cone domain 32 127 8.8E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 C3497_00785 bd749f8d370bc151208ac592a6107f03 556 SUPERFAMILY SSF53720 78 538 1.11E-65 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3497_00785 bd749f8d370bc151208ac592a6107f03 556 Gene3D G3DSA:3.40.309.10 311 520 3.3E-20 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3497_00785 bd749f8d370bc151208ac592a6107f03 556 Gene3D G3DSA:3.40.605.10 81 308 8.6E-34 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3497_00785 bd749f8d370bc151208ac592a6107f03 556 TIGRFAM TIGR02288 PaaN_2: phenylacetic acid degradation protein paaN 3 555 2.4E-292 T 14-10-2018 IPR011975 Phenylacetic acid degradation protein PaaN2 C3497_00785 bd749f8d370bc151208ac592a6107f03 556 Pfam PF00171 Aldehyde dehydrogenase family 88 501 4.8E-41 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3497_14145 e1a3fd78727cf5ca313d6f6eed695fa8 258 Pfam PF00005 ABC transporter 21 181 9.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_14145 e1a3fd78727cf5ca313d6f6eed695fa8 258 SUPERFAMILY SSF52540 4 252 2.61E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14145 e1a3fd78727cf5ca313d6f6eed695fa8 258 SMART SM00382 30 229 2.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14145 e1a3fd78727cf5ca313d6f6eed695fa8 258 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_14145 e1a3fd78727cf5ca313d6f6eed695fa8 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 2.7E-12 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal C3497_14145 e1a3fd78727cf5ca313d6f6eed695fa8 258 Gene3D G3DSA:3.40.50.300 3 255 8.7E-62 T 14-10-2018 C3497_06625 6399497fa2a65cebef084c5375ee4d57 202 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 186 7.7E-31 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 659 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 645 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 SUPERFAMILY SSF47384 477 555 7.06E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 SUPERFAMILY SSF158472 298 347 3.01E-8 T 14-10-2018 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 Gene3D G3DSA:3.30.450.20 354 475 7.8E-6 T 14-10-2018 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 SMART SM00388 482 554 9.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 SMART SM00387 592 700 3.1E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 Gene3D G3DSA:1.10.287.130 476 551 1.3E-12 T 14-10-2018 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 592 698 1.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 Pfam PF00672 HAMP domain 298 341 5.7E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 Gene3D G3DSA:3.30.565.10 555 701 1.1E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 Pfam PF00512 His Kinase A (phospho-acceptor) domain 485 552 1.6E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 PIRSF PIRSF037532 1 702 1.2E-227 T 14-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 SUPERFAMILY SSF55874 545 697 5.24E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 SMART SM00304 298 350 5.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 SUPERFAMILY SSF55785 354 472 4.65E-8 T 14-10-2018 IPR035965 PAS domain superfamily C3497_14365 b34c38b99a6c1fbf0130fc41880b09bf 703 Gene3D G3DSA:1.20.1480.50 264 353 2.9E-9 T 14-10-2018 C3497_05270 0fc0328ec014f39b8b44b86559f20c7f 306 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 296 19.516 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_05270 0fc0328ec014f39b8b44b86559f20c7f 306 Gene3D G3DSA:3.30.2350.10 2 241 1.0E-93 T 14-10-2018 C3497_05270 0fc0328ec014f39b8b44b86559f20c7f 306 SUPERFAMILY SSF88697 241 296 4.32E-7 T 14-10-2018 IPR015947 PUA-like superfamily C3497_05270 0fc0328ec014f39b8b44b86559f20c7f 306 SUPERFAMILY SSF55120 9 222 9.35E-84 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_05270 0fc0328ec014f39b8b44b86559f20c7f 306 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 242 296 7.0E-13 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_05270 0fc0328ec014f39b8b44b86559f20c7f 306 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 238 2.4E-16 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 C3497_05270 0fc0328ec014f39b8b44b86559f20c7f 306 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 4.4E-79 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_05270 0fc0328ec014f39b8b44b86559f20c7f 306 Gene3D G3DSA:2.30.130.10 242 300 2.3E-7 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 C3497_05270 0fc0328ec014f39b8b44b86559f20c7f 306 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.6E-58 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 SUPERFAMILY SSF56059 204 462 1.47E-34 T 14-10-2018 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 Gene3D G3DSA:3.30.1490.20 204 287 1.3E-18 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 SMART SM01209 203 336 0.0024 T 14-10-2018 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 Pfam PF08245 Mur ligase middle domain 475 686 5.5E-19 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 3 854 0.0 T 14-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 473 496 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 SUPERFAMILY SSF53623 433 722 2.09E-41 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 Gene3D G3DSA:3.40.1190.10 468 705 8.9E-39 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 SUPERFAMILY SSF53244 710 838 4.32E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 Gene3D G3DSA:3.90.190.20 712 862 5.2E-18 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 204 294 3.9E-6 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 Gene3D G3DSA:3.30.470.20 365 462 1.4E-11 T 14-10-2018 C3497_00070 e49525c96369fae7a76ff5a294ac63c2 864 Pfam PF02875 Mur ligase family, glutamate ligase domain 710 785 3.0E-12 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C3497_05720 3403e005fa03d40f32ea74234bfbe8b1 276 Pfam PF02569 Pantoate-beta-alanine ligase 3 274 2.0E-93 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 C3497_05720 3403e005fa03d40f32ea74234bfbe8b1 276 Gene3D G3DSA:3.40.50.620 2 174 6.5E-68 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_05720 3403e005fa03d40f32ea74234bfbe8b1 276 SUPERFAMILY SSF52374 1 276 1.28E-95 T 14-10-2018 C3497_05720 3403e005fa03d40f32ea74234bfbe8b1 276 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 275 8.6E-91 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 C3497_05720 3403e005fa03d40f32ea74234bfbe8b1 276 Hamap MF_00158 Pantothenate synthetase [panC]. 2 276 37.184 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 C3497_05720 3403e005fa03d40f32ea74234bfbe8b1 276 Gene3D G3DSA:3.30.1300.10 175 274 2.4E-31 T 14-10-2018 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 633 651 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 1.2E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 1.2E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 1.2E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 1.2E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 Gene3D G3DSA:3.40.50.300 552 765 3.1E-87 T 14-10-2018 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 856 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 Gene3D G3DSA:3.40.50.300 343 546 2.6E-68 T 14-10-2018 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 Gene3D G3DSA:1.10.1780.10 1 147 4.9E-36 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 6.1E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 761 3.4E-55 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 SMART SM01086 767 856 1.2E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.8E-12 T 14-10-2018 IPR004176 Clp, N-terminal C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.6E-13 T 14-10-2018 IPR004176 Clp, N-terminal C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 SUPERFAMILY SSF52540 548 847 1.69E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 847 3.6E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 SUPERFAMILY SSF81923 4 156 6.28E-44 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 Gene3D G3DSA:3.40.50.300 148 342 3.8E-76 T 14-10-2018 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 SMART SM00382 599 768 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 SMART SM00382 198 344 2.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 Gene3D G3DSA:1.10.8.60 767 860 9.8E-27 T 14-10-2018 C3497_07905 3934365aa7b26b5690e96c7d7222310d 860 SUPERFAMILY SSF52540 159 547 1.1E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01630 3114fc706b521e71b626dfdc604faef7 223 SUPERFAMILY SSF46785 6 77 2.9E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_01630 3114fc706b521e71b626dfdc604faef7 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 9.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_01630 3114fc706b521e71b626dfdc604faef7 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 9.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_01630 3114fc706b521e71b626dfdc604faef7 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 3.0E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_01630 3114fc706b521e71b626dfdc604faef7 223 Gene3D G3DSA:1.10.10.10 9 75 7.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_01630 3114fc706b521e71b626dfdc604faef7 223 Gene3D G3DSA:1.20.120.530 76 214 1.8E-34 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal C3497_01630 3114fc706b521e71b626dfdc604faef7 223 SMART SM00345 15 73 4.6E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_01630 3114fc706b521e71b626dfdc604faef7 223 SUPERFAMILY SSF48008 80 213 4.45E-31 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal C3497_01630 3114fc706b521e71b626dfdc604faef7 223 Pfam PF07729 FCD domain 83 206 6.1E-32 T 14-10-2018 IPR011711 GntR, C-terminal C3497_01630 3114fc706b521e71b626dfdc604faef7 223 SMART SM00895 83 207 4.1E-26 T 14-10-2018 IPR011711 GntR, C-terminal C3497_13210 5688f7223dec7c2dc35d5e5e9be9e209 679 Gene3D G3DSA:1.10.287.950 348 679 1.7E-75 T 14-10-2018 C3497_13210 5688f7223dec7c2dc35d5e5e9be9e209 679 SUPERFAMILY SSF103190 113 209 4.71E-8 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily C3497_13210 5688f7223dec7c2dc35d5e5e9be9e209 679 SMART SM00304 347 402 7.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_13210 5688f7223dec7c2dc35d5e5e9be9e209 679 Pfam PF17201 Cache 3/Cache 2 fusion domain 39 324 5.9E-60 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain C3497_13210 5688f7223dec7c2dc35d5e5e9be9e209 679 SMART SM00283 417 678 2.6E-85 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_13210 5688f7223dec7c2dc35d5e5e9be9e209 679 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 463 645 1.4E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_13210 5688f7223dec7c2dc35d5e5e9be9e209 679 SUPERFAMILY SSF58104 376 679 3.4E-73 T 14-10-2018 C3497_13210 5688f7223dec7c2dc35d5e5e9be9e209 679 Gene3D G3DSA:3.30.450.20 187 328 4.1E-6 T 14-10-2018 C3497_07765 e3d873581568243dbcf7eeaa2d900da4 773 Pfam PF00593 TonB dependent receptor 223 764 1.9E-49 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_07765 e3d873581568243dbcf7eeaa2d900da4 773 SUPERFAMILY SSF56935 12 766 3.82E-107 T 14-10-2018 C3497_07765 e3d873581568243dbcf7eeaa2d900da4 773 Gene3D G3DSA:2.170.130.10 40 161 2.2E-12 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_07765 e3d873581568243dbcf7eeaa2d900da4 773 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 153 2.4E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_07585 f46c06c37ddb5afb02f99cd3f5f21c65 120 SUPERFAMILY SSF54523 38 116 6.28E-23 T 14-10-2018 C3497_07585 f46c06c37ddb5afb02f99cd3f5f21c65 120 Gene3D G3DSA:3.30.1300.30 33 116 4.4E-25 T 14-10-2018 C3497_07585 f46c06c37ddb5afb02f99cd3f5f21c65 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_07585 f46c06c37ddb5afb02f99cd3f5f21c65 120 Pfam PF02501 Type II secretion system (T2SS), protein I 39 115 5.3E-29 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 C3497_07585 f46c06c37ddb5afb02f99cd3f5f21c65 120 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 103 8.4E-23 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 C3497_07585 f46c06c37ddb5afb02f99cd3f5f21c65 120 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 26 5.7E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_06480 cae1b00981d9a1f221acb2fe5aede3a1 261 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 259 35.791 T 14-10-2018 IPR005583 Peroxide stress protein YaaA C3497_06480 cae1b00981d9a1f221acb2fe5aede3a1 261 Pfam PF03883 Peroxide stress protein YaaA 1 247 1.1E-87 T 14-10-2018 IPR005583 Peroxide stress protein YaaA C3497_10445 5ae0d02493a327a5c9e686d35e7e030d 388 SUPERFAMILY SSF53756 8 378 4.32E-76 T 14-10-2018 C3497_10445 5ae0d02493a327a5c9e686d35e7e030d 388 Pfam PF13439 Glycosyltransferase Family 4 17 178 1.6E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_10445 5ae0d02493a327a5c9e686d35e7e030d 388 Gene3D G3DSA:3.40.50.2000 174 362 1.1E-64 T 14-10-2018 C3497_10445 5ae0d02493a327a5c9e686d35e7e030d 388 TIGRFAM TIGR03088 stp2: sugar transferase, PEP-CTERM/EpsH1 system associated 5 379 5.4E-152 T 14-10-2018 IPR017522 Sugar transferase, PEP-CTERM, Stp2 C3497_10445 5ae0d02493a327a5c9e686d35e7e030d 388 Pfam PF13692 Glycosyl transferases group 1 200 343 1.6E-32 T 14-10-2018 C3497_10445 5ae0d02493a327a5c9e686d35e7e030d 388 Gene3D G3DSA:3.40.50.2000 38 375 1.1E-64 T 14-10-2018 C3497_02305 dd68882e03822d76a515f3c9b6d4bc6a 245 Gene3D G3DSA:3.30.420.490 120 233 1.8E-68 T 14-10-2018 C3497_02305 dd68882e03822d76a515f3c9b6d4bc6a 245 SUPERFAMILY SSF53067 1 116 8.42E-25 T 14-10-2018 C3497_02305 dd68882e03822d76a515f3c9b6d4bc6a 245 Gene3D G3DSA:3.30.420.40 3 238 1.8E-68 T 14-10-2018 C3497_02305 dd68882e03822d76a515f3c9b6d4bc6a 245 Pfam PF03309 Type III pantothenate kinase 2 198 3.0E-55 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 C3497_02305 dd68882e03822d76a515f3c9b6d4bc6a 245 SUPERFAMILY SSF53067 118 239 6.47E-28 T 14-10-2018 C3497_02305 dd68882e03822d76a515f3c9b6d4bc6a 245 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 245 18.217 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 C3497_02305 dd68882e03822d76a515f3c9b6d4bc6a 245 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 222 1.9E-25 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 C3497_07100 8d5da09d43442b36750b8a79375b657a 330 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 329 55.44 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 C3497_07100 8d5da09d43442b36750b8a79375b657a 330 SUPERFAMILY SSF56327 161 329 4.17E-57 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 C3497_07100 8d5da09d43442b36750b8a79375b657a 330 PIRSF PIRSF000102 2 328 2.7E-59 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 C3497_07100 8d5da09d43442b36750b8a79375b657a 330 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 161 325 5.1E-31 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 C3497_07100 8d5da09d43442b36750b8a79375b657a 330 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 146 1.8E-37 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 C3497_07100 8d5da09d43442b36750b8a79375b657a 330 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 324 3.2E-141 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 C3497_07100 8d5da09d43442b36750b8a79375b657a 330 Gene3D G3DSA:3.90.110.10 159 330 2.9E-60 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 C3497_07100 8d5da09d43442b36750b8a79375b657a 330 Gene3D G3DSA:3.40.50.720 1 158 1.6E-59 T 14-10-2018 C3497_07100 8d5da09d43442b36750b8a79375b657a 330 SUPERFAMILY SSF51735 4 149 5.8E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_04080 6b4852d669f82ba9978f1f2fb22391cb 265 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 1.6E-65 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_04080 6b4852d669f82ba9978f1f2fb22391cb 265 Gene3D G3DSA:3.30.70.660 106 243 1.9E-48 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 C3497_04080 6b4852d669f82ba9978f1f2fb22391cb 265 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 33.974 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_04080 6b4852d669f82ba9978f1f2fb22391cb 265 Gene3D G3DSA:3.30.70.580 1 105 8.5E-36 T 14-10-2018 C3497_04080 6b4852d669f82ba9978f1f2fb22391cb 265 SUPERFAMILY SSF55120 1 250 9.93E-88 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_04080 6b4852d669f82ba9978f1f2fb22391cb 265 PIRSF PIRSF001430 1 250 8.9E-77 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_04080 6b4852d669f82ba9978f1f2fb22391cb 265 Pfam PF01416 tRNA pseudouridine synthase 9 103 3.1E-6 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_04080 6b4852d669f82ba9978f1f2fb22391cb 265 Pfam PF01416 tRNA pseudouridine synthase 143 245 1.8E-28 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_13310 9b13d7d52f571eab93b74f8e4712d29d 288 SUPERFAMILY SSF110849 31 127 1.6E-29 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily C3497_13310 9b13d7d52f571eab93b74f8e4712d29d 288 SUPERFAMILY SSF109709 117 225 1.26E-34 T 14-10-2018 C3497_13310 9b13d7d52f571eab93b74f8e4712d29d 288 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 30 209 1.5E-58 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 C3497_13310 9b13d7d52f571eab93b74f8e4712d29d 288 SMART SM00470 31 125 1.2E-37 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C3497_13310 9b13d7d52f571eab93b74f8e4712d29d 288 Pfam PF02195 ParB-like nuclease domain 33 125 8.9E-29 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C3497_13310 9b13d7d52f571eab93b74f8e4712d29d 288 Gene3D G3DSA:3.90.1530.30 44 111 4.2E-28 T 14-10-2018 C3497_13310 9b13d7d52f571eab93b74f8e4712d29d 288 Gene3D G3DSA:1.10.10.2830 112 225 2.9E-37 T 14-10-2018 C3497_12775 1f5b51e126c82235d6761f565d76d884 256 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 256 52.403 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 C3497_12775 1f5b51e126c82235d6761f565d76d884 256 Pfam PF02654 Cobalamin-5-phosphate synthase 11 247 2.3E-54 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 C3497_12775 1f5b51e126c82235d6761f565d76d884 256 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 8 248 4.6E-34 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 C3497_09570 3eb435efa936457e5a1dfa01a711bb4e 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 364 62.602 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C3497_09570 3eb435efa936457e5a1dfa01a711bb4e 365 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 225 234 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 C3497_09570 3eb435efa936457e5a1dfa01a711bb4e 365 Gene3D G3DSA:3.90.1150.10 25 358 3.7E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_09570 3eb435efa936457e5a1dfa01a711bb4e 365 Pfam PF00155 Aminotransferase class I and II 37 355 1.7E-56 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_09570 3eb435efa936457e5a1dfa01a711bb4e 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 362 9.9E-111 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C3497_09570 3eb435efa936457e5a1dfa01a711bb4e 365 Gene3D G3DSA:3.40.640.10 49 273 3.7E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_09570 3eb435efa936457e5a1dfa01a711bb4e 365 SUPERFAMILY SSF53383 16 364 4.03E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 Gene3D G3DSA:1.20.140.10 240 389 1.1E-45 T 14-10-2018 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 Gene3D G3DSA:1.10.540.10 2 125 1.3E-48 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 1.1E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 Gene3D G3DSA:2.40.110.10 126 239 8.3E-45 T 14-10-2018 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 385 1.3E-41 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 123 4.7E-37 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 PIRSF PIRSF016578 12 99 3.8E-5 T 14-10-2018 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 PIRSF PIRSF016578 136 389 6.4E-13 T 14-10-2018 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 SUPERFAMILY SSF56645 5 247 1.44E-87 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3497_01075 107e9ea1d6600695494139c79d9ad00c 390 SUPERFAMILY SSF47203 233 387 4.99E-44 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3497_01890 43902f48f58be7a934d1adf6d6ae8499 256 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-94 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 C3497_01890 43902f48f58be7a934d1adf6d6ae8499 256 SUPERFAMILY SSF54814 2 106 5.23E-37 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C3497_01890 43902f48f58be7a934d1adf6d6ae8499 256 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.0E-41 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01890 43902f48f58be7a934d1adf6d6ae8499 256 SUPERFAMILY SSF54821 108 206 2.22E-40 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01890 43902f48f58be7a934d1adf6d6ae8499 256 SMART SM00322 60 125 2.1E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 C3497_01890 43902f48f58be7a934d1adf6d6ae8499 256 Pfam PF07650 KH domain 39 111 7.2E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01890 43902f48f58be7a934d1adf6d6ae8499 256 Gene3D G3DSA:3.30.1140.32 108 208 1.3E-44 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01890 43902f48f58be7a934d1adf6d6ae8499 256 Gene3D G3DSA:3.30.300.20 17 107 2.5E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3497_01890 43902f48f58be7a934d1adf6d6ae8499 256 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01890 43902f48f58be7a934d1adf6d6ae8499 256 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.194 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 C3497_11530 359d232be62c444fa0d23154973530c6 303 Gene3D G3DSA:3.30.930.10 1 214 4.6E-112 T 14-10-2018 C3497_11530 359d232be62c444fa0d23154973530c6 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 8 290 8.4E-152 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11530 359d232be62c444fa0d23154973530c6 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 6 291 61.166 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11530 359d232be62c444fa0d23154973530c6 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 81 101 1.7E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11530 359d232be62c444fa0d23154973530c6 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 161 176 1.7E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11530 359d232be62c444fa0d23154973530c6 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 60 75 1.7E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11530 359d232be62c444fa0d23154973530c6 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 112 136 1.7E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11530 359d232be62c444fa0d23154973530c6 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 138 158 1.7E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11530 359d232be62c444fa0d23154973530c6 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 251 267 1.7E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11530 359d232be62c444fa0d23154973530c6 303 SUPERFAMILY SSF55681 7 290 6.96E-135 T 14-10-2018 C3497_11530 359d232be62c444fa0d23154973530c6 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 299 3.5E-160 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11530 359d232be62c444fa0d23154973530c6 303 Gene3D G3DSA:1.20.58.180 215 296 1.1E-35 T 14-10-2018 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 SUPERFAMILY SSF82693 43 127 2.62E-21 T 14-10-2018 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 SUPERFAMILY SSF82866 798 1026 2.62E-47 T 14-10-2018 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 Gene3D G3DSA:3.30.70.1430 566 666 1.4E-270 T 14-10-2018 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1028 1.7E-245 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 Gene3D G3DSA:3.30.2090.10 718 804 1.4E-270 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 Pfam PF00873 AcrB/AcrD/AcrF family 9 1022 1.3E-256 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 Gene3D G3DSA:1.20.1640.10 14 511 1.4E-270 T 14-10-2018 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 Gene3D G3DSA:3.30.70.1430 42 812 1.4E-270 T 14-10-2018 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 SUPERFAMILY SSF82866 294 501 2.88E-36 T 14-10-2018 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 Gene3D G3DSA:3.30.2090.10 182 273 1.4E-270 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 SUPERFAMILY SSF82714 185 266 6.15E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 Gene3D G3DSA:1.20.1640.10 512 1020 1.4E-270 T 14-10-2018 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 SUPERFAMILY SSF82693 139 319 7.67E-19 T 14-10-2018 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 Gene3D G3DSA:3.30.70.1440 668 862 1.4E-270 T 14-10-2018 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 8.6E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 8.6E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 8.6E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 8.6E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 8.6E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 8.6E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 8.6E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 8.6E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 SUPERFAMILY SSF82714 717 800 3.4E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_10655 57969887c9aa4b557a809f4d858f96a6 1039 Gene3D G3DSA:3.30.70.1320 135 327 1.4E-270 T 14-10-2018 C3497_11585 e353cbcc9befc7ffbea2bba8b6a9413c 459 Pfam PF00239 Resolvase, N terminal domain 14 166 6.1E-42 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3497_11585 e353cbcc9befc7ffbea2bba8b6a9413c 459 SMART SM00857 13 166 2.4E-62 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3497_11585 e353cbcc9befc7ffbea2bba8b6a9413c 459 Gene3D G3DSA:3.40.50.1390 9 149 5.7E-44 T 14-10-2018 C3497_11585 e353cbcc9befc7ffbea2bba8b6a9413c 459 Gene3D G3DSA:1.10.10.2600 150 285 7.1E-27 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily C3497_11585 e353cbcc9befc7ffbea2bba8b6a9413c 459 Pfam PF07508 Recombinase 187 282 2.2E-12 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 C3497_11585 e353cbcc9befc7ffbea2bba8b6a9413c 459 SUPERFAMILY SSF53041 11 166 2.88E-39 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 PRINTS PR00395 Ribosomal protein S2 signature 36 45 7.4E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 PRINTS PR00395 Ribosomal protein S2 signature 174 185 7.4E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 PRINTS PR00395 Ribosomal protein S2 signature 157 174 7.4E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 PRINTS PR00395 Ribosomal protein S2 signature 86 103 7.4E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 PRINTS PR00395 Ribosomal protein S2 signature 195 209 7.4E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 PRINTS PR00395 Ribosomal protein S2 signature 5 23 7.4E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 Pfam PF00318 Ribosomal protein S2 8 223 1.1E-92 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 2 225 4.2E-101 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 SUPERFAMILY SSF52313 5 230 2.49E-93 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 40.998 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 Gene3D G3DSA:1.10.287.610 102 149 7.2E-88 T 14-10-2018 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 Gene3D G3DSA:3.40.50.10490 7 218 7.2E-88 T 14-10-2018 C3497_07375 16a6e52d52cb798841657bc7d0f9ddd6 252 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 C3497_06305 6397d15eb92a44dd7ca5b6661bd4ee95 491 Gene3D G3DSA:3.40.50.1980 12 478 2.6E-238 T 14-10-2018 C3497_06305 6397d15eb92a44dd7ca5b6661bd4ee95 491 Gene3D G3DSA:3.40.50.1980 63 205 2.6E-238 T 14-10-2018 C3497_06305 6397d15eb92a44dd7ca5b6661bd4ee95 491 Gene3D G3DSA:3.40.50.1980 206 319 2.6E-238 T 14-10-2018 C3497_06305 6397d15eb92a44dd7ca5b6661bd4ee95 491 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 81 88 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C3497_06305 6397d15eb92a44dd7ca5b6661bd4ee95 491 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 152 166 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C3497_06305 6397d15eb92a44dd7ca5b6661bd4ee95 491 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 12 478 4.5E-265 T 14-10-2018 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C3497_06305 6397d15eb92a44dd7ca5b6661bd4ee95 491 SUPERFAMILY SSF53807 7 479 2.94E-165 T 14-10-2018 C3497_06305 6397d15eb92a44dd7ca5b6661bd4ee95 491 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 27 471 5.0E-199 T 14-10-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C3497_06305 6397d15eb92a44dd7ca5b6661bd4ee95 491 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 62 466 4.2E-111 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 C3497_14025 ebcbfd60b522d32ac6ddaf8132e161d0 366 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 174 360 3.5E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_14025 ebcbfd60b522d32ac6ddaf8132e161d0 366 SUPERFAMILY SSF161098 155 346 1.96E-38 T 14-10-2018 IPR035906 MetI-like superfamily C3497_14025 ebcbfd60b522d32ac6ddaf8132e161d0 366 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 156 252 4.9E-21 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 C3497_14025 ebcbfd60b522d32ac6ddaf8132e161d0 366 Gene3D G3DSA:1.10.3720.10 149 365 5.7E-47 T 14-10-2018 IPR035906 MetI-like superfamily C3497_10985 c0eaf7cd76668dd1974afffa5b60f3c2 115 Pfam PF11604 Copper binding periplasmic protein CusF 47 113 2.5E-27 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF C3497_10985 c0eaf7cd76668dd1974afffa5b60f3c2 115 Gene3D G3DSA:2.40.50.320 43 115 1.4E-24 T 14-10-2018 C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 Pfam PF00364 Biotin-requiring enzyme 3 73 1.4E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 Pfam PF02817 e3 binding domain 125 159 8.6E-16 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 SUPERFAMILY SSF52777 193 431 4.45E-84 T 14-10-2018 C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 Gene3D G3DSA:4.10.320.10 125 169 3.4E-19 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 Gene3D G3DSA:3.30.559.10 189 431 1.1E-92 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 SUPERFAMILY SSF51230 2 93 1.2E-23 T 14-10-2018 IPR011053 Single hybrid motif C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 205 431 5.5E-79 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 Gene3D G3DSA:2.40.50.100 1 78 3.6E-23 T 14-10-2018 C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 SUPERFAMILY SSF47005 122 164 1.16E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3497_11675 8748f4435ced05fc0b54417e0fc089e9 431 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 2 431 1.5E-178 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 SMART SM01274 18 151 2.0E-74 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 752 3.2E-97 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 SUPERFAMILY SSF53659 429 757 5.35E-90 T 14-10-2018 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 Gene3D G3DSA:3.40.50.10380 1 160 1.5E-67 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 3.3E-25 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 Gene3D G3DSA:3.40.50.720 161 438 3.8E-86 T 14-10-2018 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 4.8E-22 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 Gene3D G3DSA:3.40.50.10750 575 729 7.0E-91 T 14-10-2018 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 PRINTS PR00072 Malic enzyme signature 80 102 3.2E-5 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 PRINTS PR00072 Malic enzyme signature 190 206 3.2E-5 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 PRINTS PR00072 Malic enzyme signature 159 175 3.2E-5 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 SUPERFAMILY SSF51735 163 440 2.25E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 SUPERFAMILY SSF53223 10 161 6.19E-51 T 14-10-2018 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 Gene3D G3DSA:3.40.50.10950 440 756 7.0E-91 T 14-10-2018 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 SMART SM00919 163 400 8.4E-147 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 C3497_10080 922d44fe3f2cc4da4db64dab120e9982 766 PIRSF PIRSF036684 1 761 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 C3497_10520 730a7ceffde82aa5b729a3c7c3580264 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 261 3.5E-58 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C3497_10520 730a7ceffde82aa5b729a3c7c3580264 335 SUPERFAMILY SSF51735 1 333 2.9E-96 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_10520 730a7ceffde82aa5b729a3c7c3580264 335 Gene3D G3DSA:3.40.50.720 4 316 2.3E-100 T 14-10-2018 C3497_10520 730a7ceffde82aa5b729a3c7c3580264 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.0E-28 T 14-10-2018 C3497_10520 730a7ceffde82aa5b729a3c7c3580264 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.0E-28 T 14-10-2018 C3497_10520 730a7ceffde82aa5b729a3c7c3580264 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.0E-28 T 14-10-2018 C3497_10520 730a7ceffde82aa5b729a3c7c3580264 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.0E-28 T 14-10-2018 C3497_10520 730a7ceffde82aa5b729a3c7c3580264 335 Gene3D G3DSA:3.90.25.10 180 328 2.3E-100 T 14-10-2018 C3497_02335 67ce2fb5a206ac49f1823fd17cb28507 392 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 304 3.9E-67 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3497_02335 67ce2fb5a206ac49f1823fd17cb28507 392 Gene3D G3DSA:3.30.70.1350 222 309 1.1E-17 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 C3497_02335 67ce2fb5a206ac49f1823fd17cb28507 392 Gene3D G3DSA:1.20.1510.10 23 221 1.0E-56 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3497_02335 67ce2fb5a206ac49f1823fd17cb28507 392 SUPERFAMILY SSF161111 24 223 3.01E-47 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3497_02335 67ce2fb5a206ac49f1823fd17cb28507 392 Pfam PF01545 Cation efflux family 29 222 8.5E-40 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3497_02335 67ce2fb5a206ac49f1823fd17cb28507 392 Pfam PF16916 Dimerisation domain of Zinc Transporter 227 302 3.3E-21 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain C3497_02335 67ce2fb5a206ac49f1823fd17cb28507 392 SUPERFAMILY SSF160240 226 305 4.19E-18 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 C3497_10930 86425869f28c7cc33e114a0474bd9d14 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 7.0E-60 T 14-10-2018 IPR026325 Protein of unknown function DUF932 C3497_13085 2769d312d4a244f387dbc9cd14eb2bfc 148 SUPERFAMILY SSF48695 47 145 5.14E-41 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily C3497_13085 2769d312d4a244f387dbc9cd14eb2bfc 148 Gene3D G3DSA:1.10.1130.10 62 129 6.9E-29 T 14-10-2018 C3497_13085 2769d312d4a244f387dbc9cd14eb2bfc 148 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 21 142 3.4E-46 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB C3497_13085 2769d312d4a244f387dbc9cd14eb2bfc 148 PIRSF PIRSF006105 2 148 1.1E-49 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB C3497_10215 47376c7e3e9bae704e6c42d08ce87177 162 PIRSF PIRSF006181 7 162 1.6E-43 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC C3497_10215 47376c7e3e9bae704e6c42d08ce87177 162 Pfam PF04073 Aminoacyl-tRNA editing domain 41 151 1.6E-21 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 C3497_10215 47376c7e3e9bae704e6c42d08ce87177 162 SUPERFAMILY SSF55826 8 160 1.57E-37 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 C3497_10215 47376c7e3e9bae704e6c42d08ce87177 162 Gene3D G3DSA:3.90.960.10 4 162 8.8E-43 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 C3497_10215 47376c7e3e9bae704e6c42d08ce87177 162 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 11 160 3.4E-46 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 PRINTS PR00625 DnaJ domain signature 7 25 2.0E-33 T 14-10-2018 IPR001623 DnaJ domain C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 PRINTS PR00625 DnaJ domain signature 25 40 2.0E-33 T 14-10-2018 IPR001623 DnaJ domain C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 PRINTS PR00625 DnaJ domain signature 42 62 2.0E-33 T 14-10-2018 IPR001623 DnaJ domain C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 PRINTS PR00625 DnaJ domain signature 62 81 2.0E-33 T 14-10-2018 IPR001623 DnaJ domain C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 Pfam PF00684 DnaJ central domain 147 207 1.2E-15 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 SUPERFAMILY SSF46565 1 110 3.79E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 42.95 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 Gene3D G3DSA:2.60.260.20 256 364 2.5E-29 T 14-10-2018 C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 SMART SM00271 4 62 1.3E-33 T 14-10-2018 IPR001623 DnaJ domain C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 1.7E-140 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 Gene3D G3DSA:1.10.287.110 1 114 7.6E-39 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 SUPERFAMILY SSF57938 134 211 3.92E-23 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 Pfam PF01556 DnaJ C terminal domain 121 333 9.9E-44 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 Pfam PF00226 DnaJ domain 5 67 1.5E-29 T 14-10-2018 IPR001623 DnaJ domain C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 Gene3D G3DSA:2.10.230.10 145 211 5.0E-24 T 14-10-2018 C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 SUPERFAMILY SSF49493 258 344 2.75E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 C3497_04165 cd0ab8403d78634b6b68568a6f508558 375 SUPERFAMILY SSF49493 115 261 1.83E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 C3497_08170 d829fb949f4282498a42ba7b281fad2f 294 Pfam PF01774 UreD urease accessory protein 66 266 1.4E-43 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 C3497_08170 d829fb949f4282498a42ba7b281fad2f 294 Hamap MF_01384 Urease accessory protein UreD [ureD]. 23 278 29.116 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 SUPERFAMILY SSF55979 6 120 7.01E-25 T 14-10-2018 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 SUPERFAMILY SSF55979 248 369 3.62E-36 T 14-10-2018 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 SMART SM00480 18 365 2.8E-126 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 5 368 3.6E-97 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 Gene3D G3DSA:3.10.150.10 127 250 1.0E-37 T 14-10-2018 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 246 1.1E-30 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 SUPERFAMILY SSF55979 128 247 2.86E-27 T 14-10-2018 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 Gene3D G3DSA:3.10.150.10 251 369 1.5E-36 T 14-10-2018 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 PIRSF PIRSF000804 2 369 2.0E-115 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 6 120 3.8E-31 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 Gene3D G3DSA:3.10.150.10 3 123 2.4E-37 T 14-10-2018 C3497_14420 cbdc80a3ece74fd5b9d0f8b98eef4276 369 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 249 368 8.4E-34 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 SUPERFAMILY SSF55874 204 351 2.49E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 3.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 3.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 351 3.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 SUPERFAMILY SSF55785 17 108 6.44E-9 T 14-10-2018 IPR035965 PAS domain superfamily C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 194 3.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 SUPERFAMILY SSF47384 126 194 5.69E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 SMART SM00387 239 354 5.2E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 Gene3D G3DSA:3.30.565.10 200 353 1.6E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 Gene3D G3DSA:3.30.450.20 15 119 6.1E-17 T 14-10-2018 C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 Gene3D G3DSA:1.10.287.130 139 196 1.3E-13 T 14-10-2018 C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 Pfam PF00989 PAS fold 17 116 1.7E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 240 352 1.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_02320 268e5d06bc29bb7549335e1ec08a2e46 356 SMART SM00388 136 201 8.5E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_08360 d2454e4d3ce638512a5cd1c42236e173 224 PIRSF PIRSF006091 2 218 4.2E-68 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 C3497_08360 d2454e4d3ce638512a5cd1c42236e173 224 Pfam PF04205 FMN-binding domain 107 201 5.6E-16 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 C3497_08360 d2454e4d3ce638512a5cd1c42236e173 224 SMART SM00900 107 204 2.2E-24 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 C3497_08360 d2454e4d3ce638512a5cd1c42236e173 224 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 8 206 23.551 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 C3497_08360 d2454e4d3ce638512a5cd1c42236e173 224 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 16 204 1.7E-48 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 C3497_03765 409cdc87b96f1683317b2a1572ba9a98 142 PIRSF PIRSF002181 1 142 5.4E-48 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 C3497_03765 409cdc87b96f1683317b2a1572ba9a98 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 5.9E-61 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_03765 409cdc87b96f1683317b2a1572ba9a98 142 SUPERFAMILY SSF52161 1 140 5.89E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 C3497_03765 409cdc87b96f1683317b2a1572ba9a98 142 Gene3D G3DSA:3.90.1180.10 1 142 1.4E-61 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 C3497_03765 409cdc87b96f1683317b2a1572ba9a98 142 Pfam PF00572 Ribosomal protein L13 15 138 1.5E-55 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 C3497_03765 409cdc87b96f1683317b2a1572ba9a98 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.268 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 C3497_03080 544d18e5bc3703c39a63e7efd2501207 173 SUPERFAMILY SSF55811 6 160 4.06E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3497_03080 544d18e5bc3703c39a63e7efd2501207 173 Gene3D G3DSA:3.90.79.10 1 158 3.6E-45 T 14-10-2018 C3497_03080 544d18e5bc3703c39a63e7efd2501207 173 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.8E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3497_03080 544d18e5bc3703c39a63e7efd2501207 173 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.8E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3497_03080 544d18e5bc3703c39a63e7efd2501207 173 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3497_03080 544d18e5bc3703c39a63e7efd2501207 173 Pfam PF00293 NUDIX domain 7 136 1.8E-23 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3497_03080 544d18e5bc3703c39a63e7efd2501207 173 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.273 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH C3497_05755 28b13fb3670ab582c436a47d2bf5f05b 270 Gene3D G3DSA:3.40.50.300 1 259 2.0E-66 T 14-10-2018 C3497_05755 28b13fb3670ab582c436a47d2bf5f05b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 2.2E-102 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 C3497_05755 28b13fb3670ab582c436a47d2bf5f05b 270 PIRSF PIRSF003092 1 270 1.5E-88 T 14-10-2018 IPR025501 ATP binding protein MinD C3497_05755 28b13fb3670ab582c436a47d2bf5f05b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 225 5.6E-19 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain C3497_05755 28b13fb3670ab582c436a47d2bf5f05b 270 SUPERFAMILY SSF52540 2 268 2.09E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_03035 2138df913a3b483847dd8db05573a5f8 480 SUPERFAMILY SSF54631 9 131 2.65E-30 T 14-10-2018 C3497_03035 2138df913a3b483847dd8db05573a5f8 480 Pfam PF00571 CBS domain 11 64 1.1E-8 T 14-10-2018 IPR000644 CBS domain C3497_03035 2138df913a3b483847dd8db05573a5f8 480 Pfam PF00571 CBS domain 76 130 4.2E-13 T 14-10-2018 IPR000644 CBS domain C3497_03035 2138df913a3b483847dd8db05573a5f8 480 Pfam PF03445 Putative nucleotidyltransferase DUF294 156 293 4.9E-40 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 C3497_03035 2138df913a3b483847dd8db05573a5f8 480 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 330 473 1.7E-43 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding C3497_03035 2138df913a3b483847dd8db05573a5f8 480 SMART SM00116 83 131 1.6E-8 T 14-10-2018 IPR000644 CBS domain C3497_03035 2138df913a3b483847dd8db05573a5f8 480 SMART SM00116 18 65 3.7E-6 T 14-10-2018 IPR000644 CBS domain C3497_03035 2138df913a3b483847dd8db05573a5f8 480 Gene3D G3DSA:3.10.580.10 2 167 1.1E-34 T 14-10-2018 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 SMART SM00917 370 501 9.9E-45 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 SUPERFAMILY SSF110921 391 500 2.09E-26 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 Gene3D G3DSA:1.10.238.260 280 392 2.8E-36 T 14-10-2018 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 500 4.5E-38 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 Pfam PF00682 HMGL-like 5 273 1.1E-99 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 3.7E-222 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 Gene3D G3DSA:3.20.20.70 2 276 2.4E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 44.071 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 Gene3D G3DSA:3.30.160.270 393 501 3.8E-12 T 14-10-2018 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 SUPERFAMILY SSF51569 1 291 6.47E-101 T 14-10-2018 C3497_05675 68f886800ec0e25b3e0aa6a8460340bb 511 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_12710 9ec0498f98746248c2949db594425b66 614 Gene3D G3DSA:2.170.8.10 60 409 2.1E-269 T 14-10-2018 C3497_12710 9ec0498f98746248c2949db594425b66 614 Gene3D G3DSA:3.40.449.10 24 248 2.1E-269 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 C3497_12710 9ec0498f98746248c2949db594425b66 614 PIRSF PIRSF001348 2 612 3.6E-287 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 C3497_12710 9ec0498f98746248c2949db594425b66 614 Gene3D G3DSA:3.90.228.20 249 603 2.1E-269 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 C3497_12710 9ec0498f98746248c2949db594425b66 614 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 249 606 2.7E-172 T 14-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 C3497_12710 9ec0498f98746248c2949db594425b66 614 SUPERFAMILY SSF68923 15 248 1.41E-105 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 C3497_12710 9ec0498f98746248c2949db594425b66 614 SUPERFAMILY SSF53795 249 609 1.37E-159 T 14-10-2018 C3497_12710 9ec0498f98746248c2949db594425b66 614 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 13 613 51.68 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 C3497_12710 9ec0498f98746248c2949db594425b66 614 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 273 281 - T 14-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 C3497_12710 9ec0498f98746248c2949db594425b66 614 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 24 245 4.1E-107 T 14-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 Gene3D G3DSA:1.20.1330.10 45 462 5.6E-141 T 14-10-2018 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 Gene3D G3DSA:2.30.220.10 190 286 5.6E-141 T 14-10-2018 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 Pfam PF07196 Flagellin hook IN motif 202 245 2.2E-6 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 Gene3D G3DSA:2.170.280.10 178 410 5.6E-141 T 14-10-2018 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 Pfam PF00700 Bacterial flagellin C-terminal helical region 418 502 3.8E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 SUPERFAMILY SSF64518 1 503 4.58E-101 T 14-10-2018 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 Gene3D G3DSA:1.20.58.1830 5 502 5.6E-141 T 14-10-2018 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 4.3E-43 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 PRINTS PR00207 Flagellin signature 37 54 2.1E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 PRINTS PR00207 Flagellin signature 76 95 2.1E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 C3497_09155 2c42a5f68beefb99c9d8c4928dbfbf9e 504 PRINTS PR00207 Flagellin signature 111 134 2.1E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 580 41.389 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 Gene3D G3DSA:3.40.50.800 4 560 1.0E-236 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily C3497_03075 b580504502c3f7a937575ba58eaae35d 582 SUPERFAMILY SSF55826 218 399 1.57E-34 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 SUPERFAMILY SSF52954 473 579 1.04E-31 T 14-10-2018 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 9.4E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 9.4E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 9.4E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 9.4E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 SUPERFAMILY SSF55681 10 487 2.39E-103 T 14-10-2018 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 Gene3D G3DSA:3.90.960.10 240 398 1.0E-236 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 Pfam PF03129 Anticodon binding domain 484 576 8.9E-18 T 14-10-2018 IPR004154 Anticodon-binding C3497_03075 b580504502c3f7a937575ba58eaae35d 582 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 564 1.3E-226 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 PIRSF PIRSF001535 1 581 1.5E-272 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 468 4.7E-44 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 Gene3D G3DSA:3.30.930.10 11 474 1.0E-236 T 14-10-2018 C3497_03075 b580504502c3f7a937575ba58eaae35d 582 Pfam PF04073 Aminoacyl-tRNA editing domain 257 387 3.5E-29 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 SUPERFAMILY SSF51206 12 150 4.98E-41 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 2.3E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 2.3E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 85 102 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 SMART SM00100 17 135 4.5E-29 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 SUPERFAMILY SSF46785 152 217 3.97E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 PRINTS PR00103 cAMP-dependent protein kinase signature 95 106 1.5E-6 T 14-10-2018 C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 PRINTS PR00103 cAMP-dependent protein kinase signature 83 92 1.5E-6 T 14-10-2018 C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 PRINTS PR00103 cAMP-dependent protein kinase signature 53 67 1.5E-6 T 14-10-2018 C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 PRINTS PR00103 cAMP-dependent protein kinase signature 38 52 1.5E-6 T 14-10-2018 C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 SMART SM00419 169 218 7.4E-9 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 Pfam PF13545 Crp-like helix-turn-helix domain 155 218 3.0E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 Pfam PF00027 Cyclic nucleotide-binding domain 36 123 4.4E-28 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 Gene3D G3DSA:1.10.10.10 151 217 2.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_11780 751797effa5f1ee43f929d14ea6840ec 223 Gene3D G3DSA:2.60.120.10 10 150 3.8E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_03790 f1999d90861575dba790f75458440bbf 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 396 2.7E-125 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C3497_03790 f1999d90861575dba790f75458440bbf 399 Gene3D G3DSA:1.10.240.10 218 326 3.6E-32 T 14-10-2018 C3497_03790 f1999d90861575dba790f75458440bbf 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_03790 f1999d90861575dba790f75458440bbf 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 317 7.2E-79 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_03790 f1999d90861575dba790f75458440bbf 399 SUPERFAMILY SSF55174 320 397 2.75E-19 T 14-10-2018 C3497_03790 f1999d90861575dba790f75458440bbf 399 Gene3D G3DSA:3.10.290.10 327 397 1.4E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3497_03790 f1999d90861575dba790f75458440bbf 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 4.0E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C3497_03790 f1999d90861575dba790f75458440bbf 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 4.0E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C3497_03790 f1999d90861575dba790f75458440bbf 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 4.0E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C3497_03790 f1999d90861575dba790f75458440bbf 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 4.0E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C3497_03790 f1999d90861575dba790f75458440bbf 399 SUPERFAMILY SSF52374 8 316 3.67E-100 T 14-10-2018 C3497_03790 f1999d90861575dba790f75458440bbf 399 SMART SM00363 337 399 5.4E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_03790 f1999d90861575dba790f75458440bbf 399 Gene3D G3DSA:3.40.50.620 5 217 3.8E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_03790 f1999d90861575dba790f75458440bbf 399 Pfam PF01479 S4 domain 339 384 3.0E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_03790 f1999d90861575dba790f75458440bbf 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 48.798 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 C3497_06150 c8a51c8b713d8b03fcb4628ddb6f80a9 390 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 192 205 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_06150 c8a51c8b713d8b03fcb4628ddb6f80a9 390 Gene3D G3DSA:1.10.238.260 271 384 3.2E-25 T 14-10-2018 C3497_06150 c8a51c8b713d8b03fcb4628ddb6f80a9 390 Gene3D G3DSA:3.20.20.70 2 268 1.7E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_06150 c8a51c8b713d8b03fcb4628ddb6f80a9 390 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 5 369 9.4E-152 T 14-10-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 C3497_06150 c8a51c8b713d8b03fcb4628ddb6f80a9 390 Pfam PF00682 HMGL-like 5 263 3.9E-75 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C3497_06150 c8a51c8b713d8b03fcb4628ddb6f80a9 390 SUPERFAMILY SSF51569 1 280 4.03E-77 T 14-10-2018 C3497_06150 c8a51c8b713d8b03fcb4628ddb6f80a9 390 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_00730 2b403bf5b61b10e37f7a169e97829231 306 Gene3D G3DSA:1.10.10.10 10 88 1.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_00730 2b403bf5b61b10e37f7a169e97829231 306 Gene3D G3DSA:3.40.190.10 107 287 9.7E-33 T 14-10-2018 C3497_00730 2b403bf5b61b10e37f7a169e97829231 306 SUPERFAMILY SSF53850 99 293 4.71E-20 T 14-10-2018 C3497_00730 2b403bf5b61b10e37f7a169e97829231 306 Pfam PF03466 LysR substrate binding domain 98 291 2.5E-18 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_00730 2b403bf5b61b10e37f7a169e97829231 306 Gene3D G3DSA:3.40.190.10 165 263 9.7E-33 T 14-10-2018 C3497_00730 2b403bf5b61b10e37f7a169e97829231 306 SUPERFAMILY SSF46785 8 118 1.41E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_00730 2b403bf5b61b10e37f7a169e97829231 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 70 7.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_11620 a7c53d35c4b0540e742871137b62b689 333 Gene3D G3DSA:3.90.870.10 1 213 1.3E-80 T 14-10-2018 C3497_11620 a7c53d35c4b0540e742871137b62b689 333 Gene3D G3DSA:3.40.50.11030 214 332 1.7E-16 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily C3497_11620 a7c53d35c4b0540e742871137b62b689 333 Pfam PF03481 Putative GTP-binding controlling metal-binding 202 327 8.4E-19 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain C3497_11620 a7c53d35c4b0540e742871137b62b689 333 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 208 1.9E-57 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C3497_11620 a7c53d35c4b0540e742871137b62b689 333 Pfam PF01300 Telomere recombination 18 199 6.2E-56 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C3497_11620 a7c53d35c4b0540e742871137b62b689 333 SUPERFAMILY SSF55821 11 209 2.59E-63 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily C3497_11620 a7c53d35c4b0540e742871137b62b689 333 PIRSF PIRSF004930 1 331 2.0E-102 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 326 2.4E-42 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 Gene3D G3DSA:1.20.58.760 403 610 6.9E-69 T 14-10-2018 C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 599 2.6E-210 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 SUPERFAMILY SSF52540 148 398 2.63E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 Pfam PF06480 FtsH Extracellular 11 95 2.2E-6 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 Gene3D G3DSA:3.40.50.300 141 328 1.2E-65 T 14-10-2018 C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 SMART SM00382 189 329 1.0E-23 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 SUPERFAMILY SSF140990 408 603 1.31E-64 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 10 617 35.758 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 Gene3D G3DSA:1.10.8.60 329 402 1.1E-29 T 14-10-2018 C3497_10730 3a82c920744ac1e64f6cb5700bdba18b 626 Pfam PF01434 Peptidase family M41 389 598 5.4E-68 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 C3497_12270 b86bb8299e15cd65f219897c4f6ed0d7 300 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 2 288 5.8E-74 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 C3497_12270 b86bb8299e15cd65f219897c4f6ed0d7 300 SUPERFAMILY SSF53335 56 273 2.24E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_12270 b86bb8299e15cd65f219897c4f6ed0d7 300 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 2 294 31.771 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 C3497_12270 b86bb8299e15cd65f219897c4f6ed0d7 300 Gene3D G3DSA:3.40.50.150 106 297 4.6E-63 T 14-10-2018 C3497_12270 b86bb8299e15cd65f219897c4f6ed0d7 300 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 291 1.7E-93 T 14-10-2018 C3497_12270 b86bb8299e15cd65f219897c4f6ed0d7 300 PIRSF PIRSF000401 1 296 2.4E-92 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 C3497_09170 6f859640d0a183a3aae86e9eba59e460 133 SUPERFAMILY SSF101116 11 131 2.49E-39 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 C3497_09170 6f859640d0a183a3aae86e9eba59e460 133 Gene3D G3DSA:1.20.120.340 2 131 6.5E-42 T 14-10-2018 C3497_09170 6f859640d0a183a3aae86e9eba59e460 133 TIGRFAM TIGR00208 fliS: flagellar protein FliS 6 127 4.8E-36 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 C3497_09170 6f859640d0a183a3aae86e9eba59e460 133 Pfam PF02561 Flagellar protein FliS 10 127 4.3E-39 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 C3497_09170 6f859640d0a183a3aae86e9eba59e460 133 PIRSF PIRSF039090 3 132 7.2E-43 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 ProSitePatterns PS00746 NifH/frxC family signature 1. 89 101 - T 14-10-2018 IPR030655 NifH/chlL conserved site C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 PIRSF PIRSF000363 3 279 2.3E-125 T 14-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 5 276 3.7E-139 T 14-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 5 279 1.6E-144 T 14-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 Gene3D G3DSA:3.40.50.300 4 278 2.2E-74 T 14-10-2018 C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 PRINTS PR00091 Nitrogenase component II signature 32 47 8.7E-38 T 14-10-2018 C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 PRINTS PR00091 Nitrogenase component II signature 87 101 8.7E-38 T 14-10-2018 C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 PRINTS PR00091 Nitrogenase component II signature 126 141 8.7E-38 T 14-10-2018 C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 PRINTS PR00091 Nitrogenase component II signature 10 23 8.7E-38 T 14-10-2018 C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 ProSitePatterns PS00692 NifH/frxC family signature 2. 127 140 - T 14-10-2018 IPR030655 NifH/chlL conserved site C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 SUPERFAMILY SSF52540 8 280 1.71E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06310 afa05a6a6af0e1b97d79ff70384de70f 294 Hamap MF_00533 Nitrogenase iron protein [nifH]. 4 277 52.841 T 14-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C3497_02685 2cff2c41b1664983e5f0d453eff7b0c1 278 Pfam PF00005 ABC transporter 21 189 9.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_02685 2cff2c41b1664983e5f0d453eff7b0c1 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 239 261 1.5E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal C3497_02685 2cff2c41b1664983e5f0d453eff7b0c1 278 Gene3D G3DSA:3.40.50.300 2 273 2.3E-60 T 14-10-2018 C3497_02685 2cff2c41b1664983e5f0d453eff7b0c1 278 SUPERFAMILY SSF52540 4 262 5.74E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02685 2cff2c41b1664983e5f0d453eff7b0c1 278 SMART SM00382 29 239 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 SMART SM01231 230 298 1.2E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 Pfam PF01627 Hpt domain 3 95 4.1E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 Pfam PF01584 CheW-like domain 491 613 7.8E-20 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 Gene3D G3DSA:1.10.287.560 230 298 9.2E-13 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 Gene3D G3DSA:1.20.120.160 1 138 1.2E-33 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 SMART SM00073 1 98 2.4E-24 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 Gene3D G3DSA:3.30.565.10 299 485 5.2E-60 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 231 298 2.3E-10 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 SUPERFAMILY SSF55874 301 484 6.16E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 Gene3D G3DSA:2.30.30.40 486 607 3.0E-25 T 14-10-2018 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 SUPERFAMILY SSF47384 231 299 3.33E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 SUPERFAMILY SSF47226 1 122 2.62E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 Gene3D G3DSA:2.40.50.180 509 569 3.0E-25 T 14-10-2018 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 SUPERFAMILY SSF50341 485 612 2.75E-24 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 SMART SM00387 343 486 5.1E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 SMART SM00260 478 612 1.3E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_05980 489ea6fe760789202da69d6ceb5ac5fa 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 485 5.6E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 SUPERFAMILY SSF46785 7 80 1.25E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 SMART SM00866 97 237 5.0E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 SUPERFAMILY SSF64288 64 240 5.65E-43 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 Gene3D G3DSA:1.10.10.10 11 76 3.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 Pfam PF07702 UTRA domain 99 236 3.0E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 7 240 4.7E-71 T 14-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 5.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 5.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.3E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 Gene3D G3DSA:3.40.1410.10 83 241 4.0E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C3497_10765 00e615f55bcfc4fb2e0278c965ad463d 242 SMART SM00345 18 76 7.9E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_06880 7b7a17c9dff10dcdbc12d25c5c617a94 386 Gene3D G3DSA:3.40.640.10 16 255 1.0E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_06880 7b7a17c9dff10dcdbc12d25c5c617a94 386 Pfam PF00266 Aminotransferase class-V 5 364 3.9E-68 T 14-10-2018 IPR000192 Aminotransferase class V domain C3497_06880 7b7a17c9dff10dcdbc12d25c5c617a94 386 SUPERFAMILY SSF53383 4 372 2.58E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_06880 7b7a17c9dff10dcdbc12d25c5c617a94 386 Gene3D G3DSA:3.90.1150.10 6 364 1.0E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_06880 7b7a17c9dff10dcdbc12d25c5c617a94 386 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site C3497_06880 7b7a17c9dff10dcdbc12d25c5c617a94 386 PIRSF PIRSF005572 3 379 1.3E-126 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 SMART SM00052 478 724 8.0E-104 T 14-10-2018 IPR001633 EAL domain C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 Gene3D G3DSA:3.20.20.450 480 736 1.1E-92 T 14-10-2018 IPR035919 EAL domain superfamily C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 SMART SM00267 306 468 2.8E-31 T 14-10-2018 IPR000160 GGDEF domain C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 Pfam PF00563 EAL domain 486 719 4.7E-68 T 14-10-2018 IPR001633 EAL domain C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 SUPERFAMILY SSF55073 324 468 3.06E-26 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 Pfam PF11849 Domain of unknown function (DUF3369) 145 313 1.3E-40 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 314 464 1.3E-18 T 14-10-2018 IPR000160 GGDEF domain C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 Pfam PF00072 Response regulator receiver domain 25 135 3.9E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 SUPERFAMILY SSF52172 23 156 1.85E-12 T 14-10-2018 IPR011006 CheY-like superfamily C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 Pfam PF00990 Diguanylate cyclase, GGDEF domain 317 461 6.7E-24 T 14-10-2018 IPR000160 GGDEF domain C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 SUPERFAMILY SSF141868 485 731 5.62E-85 T 14-10-2018 IPR035919 EAL domain superfamily C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 Gene3D G3DSA:3.30.70.270 311 479 3.5E-33 T 14-10-2018 C3497_05855 2eed60cadf23b5ade57263ac1340513f 737 Gene3D G3DSA:3.40.50.2300 10 165 1.6E-13 T 14-10-2018 C3497_07895 a5f15bae2ab3f244571baab00952520b 705 Gene3D G3DSA:2.40.170.20 183 703 3.9E-90 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3497_07895 a5f15bae2ab3f244571baab00952520b 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 161 4.8E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_07895 a5f15bae2ab3f244571baab00952520b 705 Gene3D G3DSA:2.170.130.10 37 164 3.9E-20 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_07895 a5f15bae2ab3f244571baab00952520b 705 Pfam PF00593 TonB dependent receptor 272 701 1.3E-48 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_07895 a5f15bae2ab3f244571baab00952520b 705 SUPERFAMILY SSF56935 27 703 3.52E-111 T 14-10-2018 C3497_11315 8d5b4b64d2cd8b2b72ce25cfaa43e9d5 255 SUPERFAMILY SSF56281 1 247 1.97E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_11315 8d5b4b64d2cd8b2b72ce25cfaa43e9d5 255 Gene3D G3DSA:3.60.15.10 1 255 1.9E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_11315 8d5b4b64d2cd8b2b72ce25cfaa43e9d5 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 196 209 4.0E-9 T 14-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 C3497_11315 8d5b4b64d2cd8b2b72ce25cfaa43e9d5 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 82 103 4.0E-9 T 14-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 C3497_11315 8d5b4b64d2cd8b2b72ce25cfaa43e9d5 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 50 68 4.0E-9 T 14-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 C3497_11315 8d5b4b64d2cd8b2b72ce25cfaa43e9d5 255 Pfam PF12706 Beta-lactamase superfamily domain 28 218 5.0E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_11315 8d5b4b64d2cd8b2b72ce25cfaa43e9d5 255 SMART SM00849 18 222 6.7E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_13255 9f92a366c0341b1044dc4b05e83a54d6 454 Pfam PF08388 Group II intron, maturase-specific domain 334 402 3.0E-18 T 14-10-2018 IPR013597 Group II intron, maturase-specific C3497_13255 9f92a366c0341b1044dc4b05e83a54d6 454 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 111 316 2.5E-44 T 14-10-2018 IPR000477 Reverse transcriptase domain C3497_13255 9f92a366c0341b1044dc4b05e83a54d6 454 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 106 119 2.3E-8 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 C3497_13255 9f92a366c0341b1044dc4b05e83a54d6 454 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 174 192 2.3E-8 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 C3497_13255 9f92a366c0341b1044dc4b05e83a54d6 454 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 232 245 2.3E-8 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 C3497_13255 9f92a366c0341b1044dc4b05e83a54d6 454 SUPERFAMILY SSF56672 59 391 1.53E-54 T 14-10-2018 C3497_13255 9f92a366c0341b1044dc4b05e83a54d6 454 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 55 398 5.4E-126 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase C3497_06690 9f92a366c0341b1044dc4b05e83a54d6 454 Pfam PF08388 Group II intron, maturase-specific domain 334 402 3.0E-18 T 14-10-2018 IPR013597 Group II intron, maturase-specific C3497_06690 9f92a366c0341b1044dc4b05e83a54d6 454 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 111 316 2.5E-44 T 14-10-2018 IPR000477 Reverse transcriptase domain C3497_06690 9f92a366c0341b1044dc4b05e83a54d6 454 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 106 119 2.3E-8 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 C3497_06690 9f92a366c0341b1044dc4b05e83a54d6 454 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 174 192 2.3E-8 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 C3497_06690 9f92a366c0341b1044dc4b05e83a54d6 454 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 232 245 2.3E-8 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 C3497_06690 9f92a366c0341b1044dc4b05e83a54d6 454 SUPERFAMILY SSF56672 59 391 1.53E-54 T 14-10-2018 C3497_06690 9f92a366c0341b1044dc4b05e83a54d6 454 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 55 398 5.4E-126 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase C3497_06370 d4c5a7cae7a5d097576190a5e3d6100b 388 PIRSF PIRSF005962 2 387 1.3E-135 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 C3497_06370 d4c5a7cae7a5d097576190a5e3d6100b 388 Gene3D G3DSA:3.30.70.360 178 292 6.1E-144 T 14-10-2018 C3497_06370 d4c5a7cae7a5d097576190a5e3d6100b 388 SUPERFAMILY SSF55031 180 293 1.03E-32 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain C3497_06370 d4c5a7cae7a5d097576190a5e3d6100b 388 Gene3D G3DSA:3.40.630.10 12 367 6.1E-144 T 14-10-2018 C3497_06370 d4c5a7cae7a5d097576190a5e3d6100b 388 Pfam PF01546 Peptidase family M20/M25/M40 70 380 6.1E-41 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 C3497_06370 d4c5a7cae7a5d097576190a5e3d6100b 388 SUPERFAMILY SSF53187 5 383 2.19E-88 T 14-10-2018 C3497_06370 d4c5a7cae7a5d097576190a5e3d6100b 388 Pfam PF07687 Peptidase dimerisation domain 182 274 1.0E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain C3497_06370 d4c5a7cae7a5d097576190a5e3d6100b 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 11 369 5.6E-115 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 SMART SM00065 23 181 1.6E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 560 574 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 Gene3D G3DSA:3.30.450.40 3 178 1.5E-27 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 Gene3D G3DSA:3.40.50.300 467 771 6.0E-101 T 14-10-2018 C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 SMART SM00382 493 628 0.0018 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 SUPERFAMILY SSF160246 186 320 7.06E-15 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 Gene3D G3DSA:3.30.450.90 326 466 6.8E-39 T 14-10-2018 C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 SUPERFAMILY SSF55781 9 175 1.37E-22 T 14-10-2018 C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 Pfam PF01590 GAF domain 23 170 2.0E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 Pfam PF00437 Type II/IV secretion system protein 363 632 4.8E-72 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 223 322 4.7E-14 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal C3497_11310 aa74ff3925be8f69a6737ae5367c391c 771 SUPERFAMILY SSF52540 352 768 5.07E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05790 27200ac64c264fcf7e274a335912eae7 893 Gene3D G3DSA:3.40.50.720 5 134 1.9E-43 T 14-10-2018 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 SUPERFAMILY SSF52210 134 300 6.8E-44 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 Gene3D G3DSA:3.30.470.20 491 700 3.1E-72 T 14-10-2018 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 156 293 3.4E-52 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain C3497_05790 27200ac64c264fcf7e274a335912eae7 893 Pfam PF13302 Acetyltransferase (GNAT) domain 736 873 6.4E-7 T 14-10-2018 IPR000182 GNAT domain C3497_05790 27200ac64c264fcf7e274a335912eae7 893 Gene3D G3DSA:3.30.1490.20 509 586 3.1E-72 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 Gene3D G3DSA:3.40.50.261 298 464 2.2E-60 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 Pfam PF13549 ATP-grasp domain 483 702 8.1E-78 T 14-10-2018 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 Pfam PF13380 CoA binding domain 14 139 8.4E-24 T 14-10-2018 IPR003781 CoA-binding GO:0048037 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 Gene3D G3DSA:3.40.50.261 135 294 3.4E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 SUPERFAMILY SSF52210 299 456 5.36E-50 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 SUPERFAMILY SSF51735 3 144 3.74E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_05790 27200ac64c264fcf7e274a335912eae7 893 SMART SM00881 10 105 5.7E-33 T 14-10-2018 IPR003781 CoA-binding GO:0048037 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 Gene3D G3DSA:3.40.630.30 728 890 6.0E-42 T 14-10-2018 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 SUPERFAMILY SSF56059 489 704 2.55E-40 T 14-10-2018 C3497_05790 27200ac64c264fcf7e274a335912eae7 893 SUPERFAMILY SSF55729 730 880 5.75E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_11825 9d812d01ab012be28028b927d97faff4 532 Gene3D G3DSA:3.20.20.360 6 403 2.8E-185 T 14-10-2018 C3497_11825 9d812d01ab012be28028b927d97faff4 532 Gene3D G3DSA:1.20.1220.12 410 531 2.0E-46 T 14-10-2018 C3497_11825 9d812d01ab012be28028b927d97faff4 532 SUPERFAMILY SSF51645 6 530 2.75E-189 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 C3497_11825 9d812d01ab012be28028b927d97faff4 532 ProSitePatterns PS00510 Malate synthase signature. 264 279 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 C3497_11825 9d812d01ab012be28028b927d97faff4 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 22 531 1.1E-231 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 C3497_11825 9d812d01ab012be28028b927d97faff4 532 Pfam PF01274 Malate synthase 10 530 4.3E-202 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 C3497_11825 9d812d01ab012be28028b927d97faff4 532 PIRSF PIRSF001363 1 532 2.4E-247 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 C3497_12415 0a72f434340f55bc32d889258fdf9002 773 Pfam PF07670 Nucleoside recognition 513 701 2.3E-32 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 C3497_12415 0a72f434340f55bc32d889258fdf9002 773 Pfam PF07670 Nucleoside recognition 353 443 8.4E-14 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 C3497_12415 0a72f434340f55bc32d889258fdf9002 773 Pfam PF02421 Ferrous iron transport protein B 5 163 8.4E-64 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 C3497_12415 0a72f434340f55bc32d889258fdf9002 773 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 152 3.1E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_12415 0a72f434340f55bc32d889258fdf9002 773 SUPERFAMILY SSF52540 4 170 7.29E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12415 0a72f434340f55bc32d889258fdf9002 773 Gene3D G3DSA:3.40.50.300 5 192 5.4E-46 T 14-10-2018 C3497_12415 0a72f434340f55bc32d889258fdf9002 773 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 7.1E-23 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 C3497_12415 0a72f434340f55bc32d889258fdf9002 773 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 11 699 9.5E-192 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 C3497_12415 0a72f434340f55bc32d889258fdf9002 773 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 1.1E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_12415 0a72f434340f55bc32d889258fdf9002 773 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 1.1E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_09195 4552a2c48744e84ac6ed98c417104a62 160 Gene3D G3DSA:3.30.1490.190 92 154 1.6E-9 T 14-10-2018 C3497_09195 4552a2c48744e84ac6ed98c417104a62 160 Gene3D G3DSA:1.10.10.10 8 91 2.1E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_09195 4552a2c48744e84ac6ed98c417104a62 160 SUPERFAMILY SSF46785 18 150 5.04E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_09195 4552a2c48744e84ac6ed98c417104a62 160 Pfam PF01475 Ferric uptake regulator family 26 134 6.3E-12 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.0E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 PIRSF PIRSF006641 1 363 1.1E-156 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 8.5E-161 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 Gene3D G3DSA:3.40.50.300 3 278 9.6E-153 T 14-10-2018 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 SUPERFAMILY SSF81271 279 359 8.07E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.665 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 SUPERFAMILY SSF52540 3 301 1.72E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 5.5E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 Gene3D G3DSA:1.10.150.300 113 200 9.6E-153 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.7E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.7E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.7E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.7E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02525 1ca87da1e38c65e8d7e5540459483bed 363 Gene3D G3DSA:3.10.20.30 48 361 9.6E-153 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_01415 83927dcec8f9ce2f02cf97c6b3f56aaf 316 Gene3D G3DSA:3.90.1200.10 105 308 8.8E-72 T 14-10-2018 C3497_01415 83927dcec8f9ce2f02cf97c6b3f56aaf 316 Pfam PF01636 Phosphotransferase enzyme family 28 250 2.7E-34 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C3497_01415 83927dcec8f9ce2f02cf97c6b3f56aaf 316 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 302 2.9E-113 T 14-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 C3497_01415 83927dcec8f9ce2f02cf97c6b3f56aaf 316 SUPERFAMILY SSF56112 5 306 3.83E-75 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3497_01415 83927dcec8f9ce2f02cf97c6b3f56aaf 316 Gene3D G3DSA:3.30.200.20 1 102 1.9E-36 T 14-10-2018 C3497_01415 83927dcec8f9ce2f02cf97c6b3f56aaf 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 152.755 T 14-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 C3497_03270 fe2972aa3f168476c1841c29626ed085 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 438 3.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_03270 fe2972aa3f168476c1841c29626ed085 444 Pfam PF00672 HAMP domain 180 229 5.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_03270 fe2972aa3f168476c1841c29626ed085 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_03270 fe2972aa3f168476c1841c29626ed085 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_03270 fe2972aa3f168476c1841c29626ed085 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_03270 fe2972aa3f168476c1841c29626ed085 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_03270 fe2972aa3f168476c1841c29626ed085 444 SUPERFAMILY SSF47384 218 290 1.35E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_03270 fe2972aa3f168476c1841c29626ed085 444 SMART SM00388 234 292 2.6E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_03270 fe2972aa3f168476c1841c29626ed085 444 SMART SM00387 331 440 2.8E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_03270 fe2972aa3f168476c1841c29626ed085 444 Gene3D G3DSA:1.10.287.130 177 287 3.8E-18 T 14-10-2018 C3497_03270 fe2972aa3f168476c1841c29626ed085 444 SMART SM00304 180 233 2.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_03270 fe2972aa3f168476c1841c29626ed085 444 Gene3D G3DSA:3.30.565.10 294 442 6.6E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_03270 fe2972aa3f168476c1841c29626ed085 444 SUPERFAMILY SSF55874 285 438 1.07E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_13990 ce10fcc6a477fd47b915f8006b78af37 279 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_13990 ce10fcc6a477fd47b915f8006b78af37 279 SUPERFAMILY SSF52540 1 250 3.37E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13990 ce10fcc6a477fd47b915f8006b78af37 279 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 228 249 2.2E-5 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal C3497_13990 ce10fcc6a477fd47b915f8006b78af37 279 Pfam PF00005 ABC transporter 18 177 2.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_13990 ce10fcc6a477fd47b915f8006b78af37 279 SMART SM00382 26 250 1.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_13990 ce10fcc6a477fd47b915f8006b78af37 279 Gene3D G3DSA:3.40.50.300 1 250 3.1E-57 T 14-10-2018 C3497_05140 e3a99579fac70d60885c6a8007bcdc1b 233 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_05140 e3a99579fac70d60885c6a8007bcdc1b 233 Pfam PF00005 ABC transporter 34 182 5.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_05140 e3a99579fac70d60885c6a8007bcdc1b 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 14 232 1.3E-98 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 C3497_05140 e3a99579fac70d60885c6a8007bcdc1b 233 SUPERFAMILY SSF52540 15 233 1.96E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05140 e3a99579fac70d60885c6a8007bcdc1b 233 Gene3D G3DSA:3.40.50.300 13 233 3.2E-65 T 14-10-2018 C3497_05140 e3a99579fac70d60885c6a8007bcdc1b 233 SMART SM00382 43 231 4.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_12345 88f2a88f0008d899d7389df97401db12 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 26 4.3E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12345 88f2a88f0008d899d7389df97401db12 149 Gene3D G3DSA:3.30.700.10 9 132 8.3E-5 T 14-10-2018 C3497_12345 88f2a88f0008d899d7389df97401db12 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12345 88f2a88f0008d899d7389df97401db12 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 27 1.0E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12345 88f2a88f0008d899d7389df97401db12 149 SUPERFAMILY SSF54523 9 132 1.96E-9 T 14-10-2018 C3497_01400 2568e4fea03bddb5dffe146924a3d811 225 SUPERFAMILY SSF52374 8 224 1.01E-55 T 14-10-2018 C3497_01400 2568e4fea03bddb5dffe146924a3d811 225 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 11 222 5.5E-50 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C3497_01400 2568e4fea03bddb5dffe146924a3d811 225 Pfam PF01467 Cytidylyltransferase-like 11 195 4.2E-27 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3497_01400 2568e4fea03bddb5dffe146924a3d811 225 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 10 72 8.4E-10 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3497_01400 2568e4fea03bddb5dffe146924a3d811 225 Gene3D G3DSA:3.40.50.620 8 223 3.2E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_01400 2568e4fea03bddb5dffe146924a3d811 225 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 7 223 30.809 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C3497_02575 26b997d967dadeda4693a3d18828b085 83 SUPERFAMILY SSF54862 4 76 9.42E-20 T 14-10-2018 C3497_02575 26b997d967dadeda4693a3d18828b085 83 Pfam PF00037 4Fe-4S binding domain 6 25 3.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_02575 26b997d967dadeda4693a3d18828b085 83 Gene3D G3DSA:3.30.70.20 2 81 1.4E-35 T 14-10-2018 C3497_02575 26b997d967dadeda4693a3d18828b085 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_13130 5498aa5d91b2f588ae85232f664efb52 212 SUPERFAMILY SSF53098 3 166 1.3E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_13130 5498aa5d91b2f588ae85232f664efb52 212 Gene3D G3DSA:3.30.420.10 3 169 3.0E-45 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_13130 5498aa5d91b2f588ae85232f664efb52 212 Pfam PF00929 Exonuclease 9 158 1.1E-29 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3497_13130 5498aa5d91b2f588ae85232f664efb52 212 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 9 160 3.6E-27 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_13130 5498aa5d91b2f588ae85232f664efb52 212 SMART SM00479 6 171 5.5E-34 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3497_04485 84b95905d0e9c118ff0fcb3941064027 234 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 97 109 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04485 84b95905d0e9c118ff0fcb3941064027 234 Gene3D G3DSA:3.30.70.20 127 207 7.4E-7 T 14-10-2018 C3497_04485 84b95905d0e9c118ff0fcb3941064027 234 Gene3D G3DSA:3.10.20.740 4 121 2.5E-34 T 14-10-2018 C3497_04485 84b95905d0e9c118ff0fcb3941064027 234 SMART SM00929 82 122 4.1E-14 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04485 84b95905d0e9c118ff0fcb3941064027 234 Pfam PF13459 4Fe-4S single cluster domain 138 204 5.2E-10 T 14-10-2018 C3497_04485 84b95905d0e9c118ff0fcb3941064027 234 PIRSF PIRSF000309 1 233 7.4E-76 T 14-10-2018 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit MetaCyc: PWY-5382|MetaCyc: PWY-6758 C3497_04485 84b95905d0e9c118ff0fcb3941064027 234 SUPERFAMILY SSF54292 4 122 2.13E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3497_04485 84b95905d0e9c118ff0fcb3941064027 234 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 82 119 2.5E-13 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04485 84b95905d0e9c118ff0fcb3941064027 234 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 75 1.1E-17 T 14-10-2018 C3497_14670 86aa346bca320ca7e462effa5b88a75b 173 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 15 158 2.8E-31 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 C3497_14670 86aa346bca320ca7e462effa5b88a75b 173 PIRSF PIRSF018472 7 167 8.4E-43 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type C3497_14670 86aa346bca320ca7e462effa5b88a75b 173 Pfam PF04093 rod shape-determining protein MreD 14 158 1.3E-15 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 C3497_04540 9a028d42913f9778ddf7283717274b15 184 Pfam PF03449 Transcription elongation factor, N-terminal 30 100 2.8E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 C3497_04540 9a028d42913f9778ddf7283717274b15 184 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 43 74 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 C3497_04540 9a028d42913f9778ddf7283717274b15 184 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 108 182 3.4E-26 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 C3497_04540 9a028d42913f9778ddf7283717274b15 184 Hamap MF_00930 Transcription elongation factor GreB [greB]. 27 184 51.097 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 C3497_04540 9a028d42913f9778ddf7283717274b15 184 Gene3D G3DSA:3.10.50.30 104 184 2.9E-27 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 C3497_04540 9a028d42913f9778ddf7283717274b15 184 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 147 163 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 C3497_04540 9a028d42913f9778ddf7283717274b15 184 SUPERFAMILY SSF46557 29 103 4.05E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 C3497_04540 9a028d42913f9778ddf7283717274b15 184 PIRSF PIRSF006092 27 184 2.1E-45 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 C3497_04540 9a028d42913f9778ddf7283717274b15 184 SUPERFAMILY SSF54534 107 183 7.32E-23 T 14-10-2018 C3497_04540 9a028d42913f9778ddf7283717274b15 184 Hamap MF_00105 Transcription elongation factor GreA [greA]. 28 182 28.082 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 C3497_04540 9a028d42913f9778ddf7283717274b15 184 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 29 183 9.0E-63 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 C3497_04540 9a028d42913f9778ddf7283717274b15 184 Gene3D G3DSA:1.10.287.180 28 102 2.9E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 C3497_06970 45647e66bab09f3307d922f04c3c9e8a 108 Gene3D G3DSA:1.10.260.40 12 81 8.4E-11 T 14-10-2018 C3497_06970 45647e66bab09f3307d922f04c3c9e8a 108 SUPERFAMILY SSF47413 19 72 4.44E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3497_06970 45647e66bab09f3307d922f04c3c9e8a 108 SMART SM00530 23 78 1.5E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_06970 45647e66bab09f3307d922f04c3c9e8a 108 Pfam PF13560 Helix-turn-helix domain 19 78 5.5E-10 T 14-10-2018 C3497_10510 330cb44e627b7b893c03da9cf90c1fb5 248 SUPERFAMILY SSF52540 3 226 1.73E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10510 330cb44e627b7b893c03da9cf90c1fb5 248 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_10510 330cb44e627b7b893c03da9cf90c1fb5 248 SMART SM00382 32 221 7.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10510 330cb44e627b7b893c03da9cf90c1fb5 248 Gene3D G3DSA:3.40.50.300 1 230 1.7E-71 T 14-10-2018 C3497_10510 330cb44e627b7b893c03da9cf90c1fb5 248 Pfam PF00005 ABC transporter 23 173 2.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Gene3D G3DSA:2.30.30.40 1586 1713 2.2E-31 T 14-10-2018 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Gene3D G3DSA:2.40.50.180 1609 1673 2.2E-31 T 14-10-2018 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SMART SM00387 1445 1586 4.9E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SUPERFAMILY SSF47226 14 131 3.01E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SMART SM00073 1127 1223 1.2E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SMART SM00073 663 760 3.8E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SMART SM00073 967 1063 0.1 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1570 1583 3.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1546 1564 3.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1490 1504 3.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SUPERFAMILY SSF55874 1402 1584 1.7E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Pfam PF00072 Response regulator receiver domain 1750 1859 3.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SUPERFAMILY SSF47226 662 784 3.4E-25 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Pfam PF01627 Hpt domain 970 1061 4.7E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Pfam PF01627 Hpt domain 1129 1226 3.4E-15 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Pfam PF01627 Hpt domain 22 103 1.5E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Pfam PF01627 Hpt domain 665 755 9.6E-14 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Gene3D G3DSA:1.20.120.160 963 1091 3.9E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Gene3D G3DSA:1.20.120.160 656 788 1.3E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SUPERFAMILY SSF47226 969 1085 4.58E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SUPERFAMILY SSF50341 1585 1717 4.19E-24 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SUPERFAMILY SSF47226 1126 1237 2.88E-24 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SMART SM01231 1263 1400 2.5E-7 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SMART SM00448 1748 1861 2.9E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Gene3D G3DSA:3.30.565.10 1399 1585 1.6E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SUPERFAMILY SSF47226 444 548 1.06E-6 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Gene3D G3DSA:3.40.50.12740 1747 1867 6.2E-39 T 14-10-2018 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SUPERFAMILY SSF52172 1747 1864 3.42E-37 T 14-10-2018 IPR011006 CheY-like superfamily C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1449 1585 4.9E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Gene3D G3DSA:1.20.120.160 1127 1252 3.5E-23 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 SMART SM00260 1578 1718 4.4E-18 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_02210 2227aee12cf129189b62bbe54e2292a2 1868 Pfam PF01584 CheW-like domain 1590 1719 4.9E-19 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_04265 0e90e1f1b26c5d4ba4eb03ef48c485cf 276 SUPERFAMILY SSF51717 4 274 7.06E-102 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_04265 0e90e1f1b26c5d4ba4eb03ef48c485cf 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 52 65 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_04265 0e90e1f1b26c5d4ba4eb03ef48c485cf 276 Gene3D G3DSA:3.20.20.20 1 275 3.4E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_04265 0e90e1f1b26c5d4ba4eb03ef48c485cf 276 Pfam PF00809 Pterin binding enzyme 19 257 2.3E-83 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_04265 0e90e1f1b26c5d4ba4eb03ef48c485cf 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 271 3.4E-97 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 C3497_13625 b7641e9c5e3f5fa706032a819b555881 319 Gene3D G3DSA:3.90.650.10 141 319 1.2E-51 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_13625 b7641e9c5e3f5fa706032a819b555881 319 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 133 9.8E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain C3497_13625 b7641e9c5e3f5fa706032a819b555881 319 PIRSF PIRSF005303 2 318 2.5E-82 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 C3497_13625 b7641e9c5e3f5fa706032a819b555881 319 Pfam PF02769 AIR synthase related protein, C-terminal domain 146 296 9.8E-9 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C3497_13625 b7641e9c5e3f5fa706032a819b555881 319 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 318 1.1E-97 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 C3497_13625 b7641e9c5e3f5fa706032a819b555881 319 SUPERFAMILY SSF56042 139 302 4.49E-34 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_13625 b7641e9c5e3f5fa706032a819b555881 319 SUPERFAMILY SSF55326 4 133 6.63E-34 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_13625 b7641e9c5e3f5fa706032a819b555881 319 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 318 26.85 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 C3497_13625 b7641e9c5e3f5fa706032a819b555881 319 Gene3D G3DSA:3.30.1330.10 2 140 5.6E-47 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_03885 af7cdb595aace823785404dffd29dea0 173 SUPERFAMILY SSF52540 36 140 6.1E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_03885 af7cdb595aace823785404dffd29dea0 173 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 19 150 9.5E-44 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 C3497_03885 af7cdb595aace823785404dffd29dea0 173 Gene3D G3DSA:3.40.50.300 13 164 1.6E-44 T 14-10-2018 C3497_03885 af7cdb595aace823785404dffd29dea0 173 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 21 140 1.2E-38 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 C3497_09255 9767995bfbdf300c829de8387643719c 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 172 383 1.1E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_09255 9767995bfbdf300c829de8387643719c 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 374 383 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_09255 9767995bfbdf300c829de8387643719c 467 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 461 1.4E-197 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_09255 9767995bfbdf300c829de8387643719c 467 SUPERFAMILY SSF52540 119 389 2.22E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09255 9767995bfbdf300c829de8387643719c 467 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 19 463 5.5E-175 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_09255 9767995bfbdf300c829de8387643719c 467 SMART SM00382 184 367 7.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_09255 9767995bfbdf300c829de8387643719c 467 Gene3D G3DSA:3.40.50.12240 21 466 9.1E-160 T 14-10-2018 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 847 3.1E-258 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 SUPERFAMILY SSF47323 658 922 9.72E-68 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 2.7E-192 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 Gene3D G3DSA:3.40.50.620 25 635 3.4E-220 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 Pfam PF08264 Anticodon-binding domain of tRNA 691 844 7.9E-26 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 SUPERFAMILY SSF52374 3 654 2.06E-132 T 14-10-2018 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 3.0E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 3.0E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 235 258 3.0E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 3.0E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 3.0E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 924 20.751 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 Gene3D G3DSA:1.10.730.20 646 923 2.0E-85 T 14-10-2018 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 SUPERFAMILY SSF50677 201 401 6.28E-49 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 Gene3D G3DSA:3.90.740.10 192 406 3.4E-220 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3497_03870 3f309d35d0fbeb3b4ad61a6987ea2064 933 Pfam PF06827 Zinc finger found in FPG and IleRS 895 920 1.1E-6 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 8.9E-76 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 SUPERFAMILY SSF47917 383 511 2.62E-46 T 14-10-2018 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 511 1.9E-249 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 PIRSF PIRSF039088 1 512 3.7E-241 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 Gene3D G3DSA:1.20.150.20 383 511 1.4E-47 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 5.1E-46 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 3.7E-16 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 SUPERFAMILY SSF52540 96 381 7.19E-97 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 Gene3D G3DSA:2.40.30.20 1 93 3.8E-34 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 SUPERFAMILY SSF50615 10 94 5.69E-29 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 Gene3D G3DSA:3.40.50.300 94 382 8.9E-133 T 14-10-2018 C3497_13280 e1b148fbdaeeb6b69a95cd15a3b5f6e7 512 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.632 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_08080 5826b1c93ea6ba5891a173a8a8a432a3 373 PIRSF PIRSF000355 27 373 1.5E-114 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08080 5826b1c93ea6ba5891a173a8a8a432a3 373 SUPERFAMILY SSF47240 40 365 3.86E-78 T 14-10-2018 IPR009078 Ferritin-like superfamily C3497_08080 5826b1c93ea6ba5891a173a8a8a432a3 373 Gene3D G3DSA:1.10.620.20 44 366 3.5E-90 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 C3497_08080 5826b1c93ea6ba5891a173a8a8a432a3 373 Pfam PF00268 Ribonucleotide reductase, small chain 58 336 1.6E-58 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_00125 9bc786461b3f11510b21138c93dab367 327 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 88 98 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 C3497_00125 9bc786461b3f11510b21138c93dab367 327 PIRSF PIRSF500176 3 321 1.1E-65 T 14-10-2018 C3497_00125 9bc786461b3f11510b21138c93dab367 327 PIRSF PIRSF001220 1 320 1.4E-72 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3497_00125 9bc786461b3f11510b21138c93dab367 327 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 9 17 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 C3497_00125 9bc786461b3f11510b21138c93dab367 327 SMART SM00870 6 321 6.2E-97 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3497_00125 9bc786461b3f11510b21138c93dab367 327 SUPERFAMILY SSF53774 4 316 3.79E-82 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 C3497_00125 9bc786461b3f11510b21138c93dab367 327 Pfam PF00710 Asparaginase, N-terminal 6 188 1.8E-53 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 C3497_00125 9bc786461b3f11510b21138c93dab367 327 Gene3D G3DSA:3.40.50.1170 2 200 3.4E-70 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 C3497_00125 9bc786461b3f11510b21138c93dab367 327 Gene3D G3DSA:3.40.50.40 218 318 5.4E-20 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 C3497_00125 9bc786461b3f11510b21138c93dab367 327 PRINTS PR00139 Asparaginase/glutaminase family signature 7 18 3.0E-19 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3497_00125 9bc786461b3f11510b21138c93dab367 327 PRINTS PR00139 Asparaginase/glutaminase family signature 265 283 3.0E-19 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3497_00125 9bc786461b3f11510b21138c93dab367 327 PRINTS PR00139 Asparaginase/glutaminase family signature 87 105 3.0E-19 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3497_01390 b1e8903fc5f858308a06a4272ec53dc9 156 Gene3D G3DSA:3.40.1280.10 1 156 1.6E-45 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3497_01390 b1e8903fc5f858308a06a4272ec53dc9 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.304 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C3497_01390 b1e8903fc5f858308a06a4272ec53dc9 156 SUPERFAMILY SSF75217 2 153 5.76E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3497_01390 b1e8903fc5f858308a06a4272ec53dc9 156 PIRSF PIRSF004505 1 155 1.3E-38 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C3497_01390 b1e8903fc5f858308a06a4272ec53dc9 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 2.7E-43 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C3497_01390 b1e8903fc5f858308a06a4272ec53dc9 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 7.1E-46 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C3497_03895 11aa4ca7993245ff675b91f288c19850 284 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 C3497_03895 11aa4ca7993245ff675b91f288c19850 284 ProSitePatterns PS00683 Rhodanese C-terminal signature. 261 271 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 C3497_03895 11aa4ca7993245ff675b91f288c19850 284 SUPERFAMILY SSF52821 163 282 7.2E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_03895 11aa4ca7993245ff675b91f288c19850 284 SUPERFAMILY SSF52821 4 156 9.17E-43 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_03895 11aa4ca7993245ff675b91f288c19850 284 Pfam PF00581 Rhodanese-like domain 162 273 1.9E-10 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_03895 11aa4ca7993245ff675b91f288c19850 284 Pfam PF00581 Rhodanese-like domain 11 131 9.7E-16 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_03895 11aa4ca7993245ff675b91f288c19850 284 SMART SM00450 157 277 4.4E-14 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_03895 11aa4ca7993245ff675b91f288c19850 284 SMART SM00450 9 135 6.1E-21 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_03895 11aa4ca7993245ff675b91f288c19850 284 Gene3D G3DSA:3.40.250.10 2 156 1.0E-43 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_03895 11aa4ca7993245ff675b91f288c19850 284 Gene3D G3DSA:3.40.250.10 164 283 4.2E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_06265 9c5162d63782efbfd474f4f00c7786fb 501 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 383 480 1.7E-18 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis C3497_06265 9c5162d63782efbfd474f4f00c7786fb 501 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 61 72 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_06265 9c5162d63782efbfd474f4f00c7786fb 501 SUPERFAMILY SSF102114 49 281 3.14E-36 T 14-10-2018 C3497_06265 9c5162d63782efbfd474f4f00c7786fb 501 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 35 481 1.5E-193 T 14-10-2018 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 C3497_06265 9c5162d63782efbfd474f4f00c7786fb 501 Gene3D G3DSA:3.20.20.70 47 327 4.6E-31 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_06265 9c5162d63782efbfd474f4f00c7786fb 501 Gene3D G3DSA:3.30.420.130 370 490 2.3E-27 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily C3497_06265 9c5162d63782efbfd474f4f00c7786fb 501 Pfam PF04055 Radical SAM superfamily 61 238 5.1E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_06265 9c5162d63782efbfd474f4f00c7786fb 501 SUPERFAMILY SSF53146 372 484 6.54E-28 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily C3497_07035 d163b416608591aedb8f75f8d3f6e1b4 287 Gene3D G3DSA:3.30.1370.120 32 91 3.2E-5 T 14-10-2018 IPR038591 NolW-like superfamily C3497_02020 69fc7e38af896cf212738a0e6e9ab77a 397 Pfam PF07690 Major Facilitator Superfamily 20 345 2.3E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_02020 69fc7e38af896cf212738a0e6e9ab77a 397 SUPERFAMILY SSF103473 1 386 1.28E-55 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_02020 69fc7e38af896cf212738a0e6e9ab77a 397 Gene3D G3DSA:1.20.1250.20 1 384 1.1E-77 T 14-10-2018 C3497_07550 6c6b75d63af97b32feb3d5197902ec56 210 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 200 1.7E-57 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C3497_07550 6c6b75d63af97b32feb3d5197902ec56 210 Pfam PF01300 Telomere recombination 23 198 1.1E-41 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C3497_07550 6c6b75d63af97b32feb3d5197902ec56 210 Gene3D G3DSA:3.90.870.10 1 206 1.2E-59 T 14-10-2018 C3497_07550 6c6b75d63af97b32feb3d5197902ec56 210 SUPERFAMILY SSF55821 1 203 2.14E-60 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily C3497_10940 59393049a5ed5fbe532ceda4fbdda1b5 92 Gene3D G3DSA:2.40.10.300 21 92 2.8E-35 T 14-10-2018 IPR038644 CopK superfamily C3497_10940 59393049a5ed5fbe532ceda4fbdda1b5 92 Pfam PF11525 Copper resistance protein K 24 89 8.8E-37 T 14-10-2018 IPR021604 Copper resistance protein K GO:0046872 C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 14-10-2018 C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 Gene3D G3DSA:1.10.10.2720 73 143 1.4E-29 T 14-10-2018 C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 32.064 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 SUPERFAMILY SSF54747 3 73 1.83E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.4E-67 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 SMART SM00649 9 141 1.0E-88 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 SUPERFAMILY SSF46906 68 141 2.22E-28 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.1E-29 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 6.5E-27 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 C3497_01805 ec450b7b792b861a58d428cc9fe13418 143 Gene3D G3DSA:3.30.1550.10 2 72 6.6E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily C3497_05475 2444c3206678c73c13761bbadd0158f1 412 SUPERFAMILY SSF53901 215 410 5.15E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_05475 2444c3206678c73c13761bbadd0158f1 412 PIRSF PIRSF000447 1 412 2.6E-183 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 C3497_05475 2444c3206678c73c13761bbadd0158f1 412 Gene3D G3DSA:3.40.47.10 257 400 1.9E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_05475 2444c3206678c73c13761bbadd0158f1 412 Gene3D G3DSA:3.40.47.10 1 255 1.1E-97 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_05475 2444c3206678c73c13761bbadd0158f1 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site C3497_05475 2444c3206678c73c13761bbadd0158f1 412 SUPERFAMILY SSF53901 4 252 1.32E-81 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_05475 2444c3206678c73c13761bbadd0158f1 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 1.4E-193 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 C3497_05475 2444c3206678c73c13761bbadd0158f1 412 SMART SM00825 Beta-ketoacyl synthase 6 411 4.5E-17 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain C3497_05475 2444c3206678c73c13761bbadd0158f1 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 4.4E-63 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal C3497_05475 2444c3206678c73c13761bbadd0158f1 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 368 1.2E-33 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 Gene3D G3DSA:1.10.287.130 632 731 1.8E-17 T 14-10-2018 C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 SMART SM00091 487 556 4.2E-7 T 14-10-2018 IPR000014 PAS domain C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 SMART SM00091 359 427 0.21 T 14-10-2018 IPR000014 PAS domain C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 SUPERFAMILY SSF55874 739 893 2.1E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 357 480 9.5E-12 T 14-10-2018 IPR000014 PAS domain C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 484 609 3.7E-12 T 14-10-2018 IPR000014 PAS domain C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 Gene3D G3DSA:3.30.450.20 475 600 6.2E-17 T 14-10-2018 C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 Gene3D G3DSA:3.30.450.20 348 473 1.1E-16 T 14-10-2018 C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 784 893 7.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 SUPERFAMILY SSF55785 350 473 3.66E-18 T 14-10-2018 IPR035965 PAS domain superfamily C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 Pfam PF13426 PAS domain 376 473 7.0E-8 T 14-10-2018 IPR000014 PAS domain C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 Pfam PF13426 PAS domain 506 601 1.0E-8 T 14-10-2018 IPR000014 PAS domain C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 Gene3D G3DSA:3.30.565.10 732 893 2.4E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 PRINTS PR00344 Bacterial sensor protein C-terminal signature 879 892 4.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 851 4.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 PRINTS PR00344 Bacterial sensor protein C-terminal signature 823 837 4.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 PRINTS PR00344 Bacterial sensor protein C-terminal signature 854 872 4.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 SUPERFAMILY SSF47384 651 694 1.12E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 SUPERFAMILY SSF55785 472 600 7.85E-19 T 14-10-2018 IPR035965 PAS domain superfamily C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 SMART SM00387 781 895 8.7E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_05865 a1635578bf7406dc24c39b07ba3d3cb4 896 Pfam PF00512 His Kinase A (phospho-acceptor) domain 656 701 9.0E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_14550 a613ca05d339bc46c6658d033204caa0 260 Gene3D G3DSA:3.40.50.720 13 256 2.8E-52 T 14-10-2018 C3497_14550 a613ca05d339bc46c6658d033204caa0 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.3E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14550 a613ca05d339bc46c6658d033204caa0 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.3E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14550 a613ca05d339bc46c6658d033204caa0 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 8.3E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14550 a613ca05d339bc46c6658d033204caa0 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.3E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14550 a613ca05d339bc46c6658d033204caa0 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 8.3E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14550 a613ca05d339bc46c6658d033204caa0 260 SUPERFAMILY SSF51735 13 234 1.56E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_14550 a613ca05d339bc46c6658d033204caa0 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3497_14550 a613ca05d339bc46c6658d033204caa0 260 Pfam PF00106 short chain dehydrogenase 14 198 1.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_04910 0fa42088a9c7f0a659a5384d4a48c0ad 327 Pfam PF01609 Transposase DDE domain 137 311 1.9E-28 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_04910 0fa42088a9c7f0a659a5384d4a48c0ad 327 Pfam PF05598 Transposase domain (DUF772) 50 124 1.2E-21 T 14-10-2018 IPR008490 Transposase InsH, N-terminal C3497_09110 0fa42088a9c7f0a659a5384d4a48c0ad 327 Pfam PF01609 Transposase DDE domain 137 311 1.9E-28 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_09110 0fa42088a9c7f0a659a5384d4a48c0ad 327 Pfam PF05598 Transposase domain (DUF772) 50 124 1.2E-21 T 14-10-2018 IPR008490 Transposase InsH, N-terminal C3497_08520 0fa42088a9c7f0a659a5384d4a48c0ad 327 Pfam PF01609 Transposase DDE domain 137 311 1.9E-28 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_08520 0fa42088a9c7f0a659a5384d4a48c0ad 327 Pfam PF05598 Transposase domain (DUF772) 50 124 1.2E-21 T 14-10-2018 IPR008490 Transposase InsH, N-terminal C3497_03090 ff6012518dece663bba0ead80ca6633f 1193 Gene3D G3DSA:3.40.50.970 12 223 6.4E-28 T 14-10-2018 C3497_03090 ff6012518dece663bba0ead80ca6633f 1193 SUPERFAMILY SSF52518 21 235 1.47E-20 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_03090 ff6012518dece663bba0ead80ca6633f 1193 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 735 935 2.2E-25 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 C3497_03090 ff6012518dece663bba0ead80ca6633f 1193 SUPERFAMILY SSF53323 727 984 9.68E-32 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 C3497_03090 ff6012518dece663bba0ead80ca6633f 1193 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 461 547 5.8E-6 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 C3497_03090 ff6012518dece663bba0ead80ca6633f 1193 Gene3D G3DSA:3.40.920.10 724 941 1.3E-18 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 C3497_03090 ff6012518dece663bba0ead80ca6633f 1193 SUPERFAMILY SSF52518 441 629 1.09E-13 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_03090 ff6012518dece663bba0ead80ca6633f 1193 SUPERFAMILY SSF52922 269 402 4.19E-8 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3497_13190 702df040575bd39099c326ce7ff3a4f3 240 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 54 238 2.8E-54 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 C3497_13190 702df040575bd39099c326ce7ff3a4f3 240 Gene3D G3DSA:3.40.50.150 33 240 3.6E-68 T 14-10-2018 C3497_13190 702df040575bd39099c326ce7ff3a4f3 240 SUPERFAMILY SSF53335 20 239 6.0E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_13190 702df040575bd39099c326ce7ff3a4f3 240 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 27 239 30.273 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 C3497_13190 702df040575bd39099c326ce7ff3a4f3 240 Pfam PF02390 Putative methyltransferase 68 233 1.1E-54 T 14-10-2018 C3497_11970 4a1baa09647aa61bd069d11c747928ab 338 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_11970 4a1baa09647aa61bd069d11c747928ab 338 Pfam PF16074 Type IV Pilus-assembly protein W 235 314 6.1E-10 T 14-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 C3497_11970 4a1baa09647aa61bd069d11c747928ab 338 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 31 2.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_11970 4a1baa09647aa61bd069d11c747928ab 338 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 6.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_06110 cdc374f19cb3f2708dceedf7f0e3e11d 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 7.7E-88 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 C3497_06110 cdc374f19cb3f2708dceedf7f0e3e11d 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 C3497_06110 cdc374f19cb3f2708dceedf7f0e3e11d 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 C3497_06110 cdc374f19cb3f2708dceedf7f0e3e11d 257 Gene3D G3DSA:3.20.20.140 1 256 9.6E-93 T 14-10-2018 C3497_06110 cdc374f19cb3f2708dceedf7f0e3e11d 257 PIRSF PIRSF005902 1 255 4.8E-79 T 14-10-2018 IPR001130 TatD family GO:0016788 C3497_06110 cdc374f19cb3f2708dceedf7f0e3e11d 257 Pfam PF01026 TatD related DNase 3 251 8.8E-81 T 14-10-2018 IPR001130 TatD family GO:0016788 C3497_06110 cdc374f19cb3f2708dceedf7f0e3e11d 257 SUPERFAMILY SSF51556 2 252 3.87E-90 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3497_02910 b38e0f54c1f4bc7489a8b6fcb22e1175 170 SUPERFAMILY SSF158682 24 147 6.93E-11 T 14-10-2018 IPR029024 TerB-like C3497_02910 b38e0f54c1f4bc7489a8b6fcb22e1175 170 Gene3D G3DSA:1.10.3680.10 12 148 2.9E-8 T 14-10-2018 IPR029024 TerB-like C3497_02910 b38e0f54c1f4bc7489a8b6fcb22e1175 170 Pfam PF05099 Tellurite resistance protein TerB 27 143 3.0E-7 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 Gene3D G3DSA:3.30.565.10 741 898 6.6E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SMART SM00086 483 525 4.2E-6 T 14-10-2018 IPR001610 PAC motif C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SMART SM00086 359 397 3.0E-5 T 14-10-2018 IPR001610 PAC motif C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SMART SM00086 609 649 100.0 T 14-10-2018 IPR001610 PAC motif C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 Pfam PF13188 PAS domain 537 590 1.0E-5 T 14-10-2018 IPR000014 PAS domain C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SUPERFAMILY SSF55785 394 523 9.02E-25 T 14-10-2018 IPR035965 PAS domain superfamily C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 Gene3D G3DSA:3.30.450.20 535 663 1.4E-10 T 14-10-2018 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 Pfam PF00989 PAS fold 410 522 5.0E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 Gene3D G3DSA:3.30.450.20 412 534 2.1E-23 T 14-10-2018 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 784 893 9.5E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 Pfam PF00512 His Kinase A (phospho-acceptor) domain 672 738 3.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SMART SM00388 671 741 5.1E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 Gene3D G3DSA:1.10.287.130 676 738 2.4E-19 T 14-10-2018 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SMART SM00387 783 894 1.4E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 839 1.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 854 872 1.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 878 891 1.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 853 1.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SMART SM00091 409 476 5.0E-8 T 14-10-2018 IPR000014 PAS domain C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SMART SM00091 537 601 3.8 T 14-10-2018 IPR000014 PAS domain C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SMART SM00091 288 354 5.0E-9 T 14-10-2018 IPR000014 PAS domain C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SUPERFAMILY SSF55785 522 647 2.05E-11 T 14-10-2018 IPR035965 PAS domain superfamily C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 536 654 7.6E-7 T 14-10-2018 IPR000014 PAS domain C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 407 532 2.8E-23 T 14-10-2018 IPR000014 PAS domain C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 289 404 6.2E-21 T 14-10-2018 IPR000014 PAS domain C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SUPERFAMILY SSF55785 293 398 6.73E-25 T 14-10-2018 IPR035965 PAS domain superfamily C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 Gene3D G3DSA:3.30.450.20 290 410 2.0E-24 T 14-10-2018 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SUPERFAMILY SSF55874 731 892 1.57E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 SUPERFAMILY SSF47384 668 738 1.45E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_11660 5178e2cef1eedddbd9bb0f2773ad8c74 903 Pfam PF08447 PAS fold 312 384 2.7E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3497_04655 ad20e71260b21e45526eaea7f0236095 705 PIRSF PIRSF015380 10 677 2.0E-172 T 14-10-2018 IPR011385 Putative site-specific recombinase Gcr C3497_04655 ad20e71260b21e45526eaea7f0236095 705 Pfam PF10136 Site-specific recombinase 13 662 6.8E-239 T 14-10-2018 IPR011385 Putative site-specific recombinase Gcr C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 Gene3D G3DSA:1.10.40.30 382 445 1.4E-149 T 14-10-2018 C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 452 4.4E-119 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.4E-19 T 14-10-2018 IPR000362 Fumarate lyase family C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.4E-19 T 14-10-2018 IPR000362 Fumarate lyase family C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.4E-19 T 14-10-2018 IPR000362 Fumarate lyase family C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.4E-19 T 14-10-2018 IPR000362 Fumarate lyase family C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 SUPERFAMILY SSF48557 5 447 8.64E-105 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 Pfam PF00206 Lyase 14 313 4.2E-62 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 4.5E-49 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 Gene3D G3DSA:1.20.200.10 118 446 1.4E-149 T 14-10-2018 C3497_02635 8f434d49e727773ba9f2eed4d108308e 455 Gene3D G3DSA:1.10.275.10 1 117 2.3E-41 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 Gene3D G3DSA:3.40.1160.10 1 269 3.4E-94 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 SUPERFAMILY SSF53633 9 259 1.3E-69 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 Pfam PF00696 Amino acid kinase family 10 237 2.3E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 Gene3D G3DSA:2.30.130.10 270 371 3.6E-32 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 263 36.058 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 PIRSF PIRSF000729 4 371 1.5E-131 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 Pfam PF01472 PUA domain 281 352 2.9E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 SMART SM00359 281 363 6.9E-16 T 14-10-2018 IPR002478 PUA domain GO:0003723 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 SUPERFAMILY SSF88697 281 370 3.59E-23 T 14-10-2018 IPR015947 PUA-like superfamily C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 4.2E-130 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 4.2E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 4.2E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 4.2E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 4.2E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3497_04760 769aecda4741d1a3d15d3aaecf2c34a3 371 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 4.2E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3497_11290 5d9bd57eb370bb6d8c64382595ffc882 453 Gene3D G3DSA:3.90.1150.10 18 437 1.9E-157 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_11290 5d9bd57eb370bb6d8c64382595ffc882 453 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_11290 5d9bd57eb370bb6d8c64382595ffc882 453 Pfam PF00202 Aminotransferase class-III 17 435 2.6E-106 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_11290 5d9bd57eb370bb6d8c64382595ffc882 453 Gene3D G3DSA:3.40.640.10 51 328 1.9E-157 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_11290 5d9bd57eb370bb6d8c64382595ffc882 453 SUPERFAMILY SSF53383 14 437 1.36E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_11290 5d9bd57eb370bb6d8c64382595ffc882 453 PIRSF PIRSF000521 2 377 1.1E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 SUPERFAMILY SSF46589 915 979 9.94E-17 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 SUPERFAMILY SSF52374 3 675 7.66E-135 T 14-10-2018 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 Gene3D G3DSA:3.40.50.620 4 198 3.3E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 Gene3D G3DSA:3.90.740.10 199 355 1.5E-48 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 Gene3D G3DSA:3.40.50.620 356 622 1.4E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 SUPERFAMILY SSF50677 193 363 6.02E-58 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 915 979 1.2E-21 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 3.4E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 3.4E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 PRINTS PR00986 Valyl-tRNA synthetase signature 504 525 3.4E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 PRINTS PR00986 Valyl-tRNA synthetase signature 540 558 3.4E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 PRINTS PR00986 Valyl-tRNA synthetase signature 367 380 3.4E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 TIGRFAM TIGR00422 valS: valine--tRNA ligase 4 962 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 665 6.5E-201 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 Pfam PF08264 Anticodon-binding domain of tRNA 710 859 2.0E-43 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 980 15.832 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 Gene3D G3DSA:1.10.287.380 908 980 2.6E-17 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 SUPERFAMILY SSF47323 676 930 7.1E-67 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_08020 2c9973564b1be43d8a6493a328f1b1b7 982 Gene3D G3DSA:1.10.730.10 623 854 1.4E-72 T 14-10-2018 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 SUPERFAMILY SSF81593 181 300 7.85E-9 T 14-10-2018 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 Pfam PF08335 GlnD PII-uridylyltransferase 167 305 1.4E-36 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 Gene3D G3DSA:3.30.70.260 786 858 1.4E-9 T 14-10-2018 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 Pfam PF01909 Nucleotidyltransferase domain 57 102 1.8E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 SUPERFAMILY SSF109604 409 533 1.16E-14 T 14-10-2018 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 Gene3D G3DSA:1.10.3210.10 428 571 2.7E-8 T 14-10-2018 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 PIRSF PIRSF006288 1 858 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 Pfam PF01966 HD domain 443 555 6.7E-10 T 14-10-2018 IPR006674 HD domain C3497_07385 a1206da4726927b1be65c51302f0b98a 858 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 25 851 7.7E-246 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 SMART SM00471 438 585 1.1E-4 T 14-10-2018 IPR003607 HD/PDEase domain C3497_07385 a1206da4726927b1be65c51302f0b98a 858 SUPERFAMILY SSF81301 22 162 1.52E-19 T 14-10-2018 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 SUPERFAMILY SSF55021 678 731 3.47E-7 T 14-10-2018 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 Pfam PF01842 ACT domain 789 832 3.6E-7 T 14-10-2018 IPR002912 ACT domain C3497_07385 a1206da4726927b1be65c51302f0b98a 858 SUPERFAMILY SSF55021 786 844 6.11E-11 T 14-10-2018 C3497_07385 a1206da4726927b1be65c51302f0b98a 858 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 858 312.79 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 C3497_01190 df17c843c3cce568aa42dfe789ab2899 437 Pfam PF01794 Ferric reductase like transmembrane component 43 169 5.0E-18 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain C3497_01190 df17c843c3cce568aa42dfe789ab2899 437 SUPERFAMILY SSF52343 313 434 2.75E-20 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_01190 df17c843c3cce568aa42dfe789ab2899 437 Gene3D G3DSA:3.40.50.80 310 437 9.6E-19 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_01190 df17c843c3cce568aa42dfe789ab2899 437 Gene3D G3DSA:2.40.30.10 208 305 1.2E-15 T 14-10-2018 C3497_01190 df17c843c3cce568aa42dfe789ab2899 437 SUPERFAMILY SSF63380 215 307 1.34E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3497_01190 df17c843c3cce568aa42dfe789ab2899 437 Pfam PF08022 FAD-binding domain 222 305 2.5E-7 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 C3497_09365 3f44e428df220ae5f18ccef2f7cd3482 233 Gene3D G3DSA:3.90.1210.10 109 174 1.6E-7 T 14-10-2018 C3497_09365 3f44e428df220ae5f18ccef2f7cd3482 233 SMART SM00858 109 171 3.4E-11 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 C3497_09365 3f44e428df220ae5f18ccef2f7cd3482 233 Pfam PF13144 Chaperone for flagella basal body P-ring formation 34 231 2.5E-53 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal C3497_09365 3f44e428df220ae5f18ccef2f7cd3482 233 Gene3D G3DSA:2.30.30.760 175 233 7.2E-23 T 14-10-2018 C3497_09365 3f44e428df220ae5f18ccef2f7cd3482 233 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 97 231 1.8E-40 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal C3497_05215 75793c7fe74e202c9fb7e0c716e39eff 201 Gene3D G3DSA:3.40.30.10 30 198 6.6E-49 T 14-10-2018 C3497_05215 75793c7fe74e202c9fb7e0c716e39eff 201 Pfam PF02630 SCO1/SenC 40 173 1.7E-35 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_05215 75793c7fe74e202c9fb7e0c716e39eff 201 SUPERFAMILY SSF52833 41 197 4.02E-47 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Gene3D G3DSA:3.40.1170.10 1 112 2.2E-46 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Gene3D G3DSA:1.10.1420.10 392 527 2.5E-95 T 14-10-2018 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Gene3D G3DSA:1.10.1420.10 256 551 2.5E-95 T 14-10-2018 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 SMART SM00533 273 583 5.1E-92 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 679 695 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 PIRSF PIRSF037677 1 807 5.7E-142 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 SUPERFAMILY SSF53150 105 256 8.89E-36 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Pfam PF01624 MutS domain I 1 110 5.5E-39 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 841 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 SUPERFAMILY SSF52540 559 789 3.67E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 SUPERFAMILY SSF48334 257 557 3.27E-83 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Pfam PF00488 MutS domain V 602 788 2.1E-83 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 SUPERFAMILY SSF55271 1 106 2.62E-39 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Pfam PF05192 MutS domain III 259 550 1.7E-31 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Gene3D G3DSA:3.30.420.110 119 252 1.3E-30 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 836 24.043 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Pfam PF05190 MutS family domain IV 420 511 8.2E-31 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Gene3D G3DSA:3.40.50.300 560 810 5.2E-98 T 14-10-2018 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 Pfam PF05188 MutS domain II 120 242 6.2E-20 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 C3497_07130 0fe75f30f162a3e7755fbd67cbc8522f 845 SMART SM00534 598 785 1.1E-112 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 C3497_09245 ca8da4649678d428139e197183612ef4 334 Pfam PF01706 FliG C-terminal domain 218 324 4.4E-43 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal C3497_09245 ca8da4649678d428139e197183612ef4 334 PIRSF PIRSF003161 2 334 1.5E-115 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 C3497_09245 ca8da4649678d428139e197183612ef4 334 Gene3D G3DSA:1.10.220.30 195 334 1.8E-47 T 14-10-2018 C3497_09245 ca8da4649678d428139e197183612ef4 334 Pfam PF14841 FliG middle domain 119 187 2.2E-26 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain C3497_09245 ca8da4649678d428139e197183612ef4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 6 22 1.1E-61 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 C3497_09245 ca8da4649678d428139e197183612ef4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 248 268 1.1E-61 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 C3497_09245 ca8da4649678d428139e197183612ef4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 272 298 1.1E-61 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 C3497_09245 ca8da4649678d428139e197183612ef4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 35 61 1.1E-61 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 C3497_09245 ca8da4649678d428139e197183612ef4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 114 137 1.1E-61 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 C3497_09245 ca8da4649678d428139e197183612ef4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 226 246 1.1E-61 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 C3497_09245 ca8da4649678d428139e197183612ef4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 195 220 1.1E-61 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 C3497_09245 ca8da4649678d428139e197183612ef4 334 Gene3D G3DSA:1.10.220.30 4 84 1.3E-15 T 14-10-2018 C3497_09245 ca8da4649678d428139e197183612ef4 334 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 8 333 6.8E-108 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 C3497_09245 ca8da4649678d428139e197183612ef4 334 SUPERFAMILY SSF48029 116 325 9.55E-70 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical C3497_09245 ca8da4649678d428139e197183612ef4 334 Pfam PF14842 FliG N-terminal domain 8 105 1.5E-24 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain C3497_09245 ca8da4649678d428139e197183612ef4 334 Gene3D G3DSA:1.10.220.30 88 191 6.1E-28 T 14-10-2018 C3497_09245 ca8da4649678d428139e197183612ef4 334 SUPERFAMILY SSF48029 6 115 5.75E-20 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical C3497_09310 2ce778cae9cbe37cc48c8acd6e9a9fdb 425 Gene3D G3DSA:1.20.1330.10 290 403 6.6E-10 T 14-10-2018 C3497_09310 2ce778cae9cbe37cc48c8acd6e9a9fdb 425 Pfam PF00700 Bacterial flagellin C-terminal helical region 344 424 8.0E-8 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 C3497_09310 2ce778cae9cbe37cc48c8acd6e9a9fdb 425 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 4.3E-18 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 C3497_09310 2ce778cae9cbe37cc48c8acd6e9a9fdb 425 SUPERFAMILY SSF64518 1 424 4.05E-64 T 14-10-2018 C3497_09310 2ce778cae9cbe37cc48c8acd6e9a9fdb 425 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 424 2.8E-87 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 C3497_09310 2ce778cae9cbe37cc48c8acd6e9a9fdb 425 Gene3D G3DSA:1.20.1330.10 40 245 4.1E-42 T 14-10-2018 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 Gene3D G3DSA:3.40.630.10 180 496 3.4E-142 T 14-10-2018 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 487 1.6E-129 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 141 9.9E-23 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 SUPERFAMILY SSF52949 1 185 2.06E-37 T 14-10-2018 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 496 38.772 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 SUPERFAMILY SSF53187 180 494 6.91E-128 T 14-10-2018 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 2.4E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 2.4E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 2.4E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 2.4E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 2.4E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C3497_08005 3fb9238d0918ba886ef9c702067817d9 498 Gene3D G3DSA:3.40.220.10 1 163 1.1E-44 T 14-10-2018 C3497_12865 098d3c7fd27e15098d74b178e935168c 603 SUPERFAMILY SSF56235 1 221 7.12E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_12865 098d3c7fd27e15098d74b178e935168c 603 Pfam PF00733 Asparagine synthase 239 583 3.7E-88 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 C3497_12865 098d3c7fd27e15098d74b178e935168c 603 Gene3D G3DSA:3.60.20.10 3 188 1.9E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_12865 098d3c7fd27e15098d74b178e935168c 603 PIRSF PIRSF001589 1 601 3.1E-196 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 C3497_12865 098d3c7fd27e15098d74b178e935168c 603 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 520 2.4E-139 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 C3497_12865 098d3c7fd27e15098d74b178e935168c 603 Pfam PF13537 Glutamine amidotransferase domain 46 164 4.1E-44 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain C3497_12865 098d3c7fd27e15098d74b178e935168c 603 SUPERFAMILY SSF52402 229 566 4.44E-76 T 14-10-2018 C3497_10660 85c0944babc3409a5c117a3a61de12c3 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 72 241 2.4E-9 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3497_10660 85c0944babc3409a5c117a3a61de12c3 370 SUPERFAMILY SSF111369 111 218 1.44E-6 T 14-10-2018 C3497_10660 85c0944babc3409a5c117a3a61de12c3 370 Gene3D G3DSA:2.40.30.170 226 241 2.7E-11 T 14-10-2018 C3497_10660 85c0944babc3409a5c117a3a61de12c3 370 Gene3D G3DSA:1.10.287.470 126 191 2.7E-11 T 14-10-2018 C3497_10660 85c0944babc3409a5c117a3a61de12c3 370 Gene3D G3DSA:2.40.420.20 297 370 3.8E-15 T 14-10-2018 C3497_10660 85c0944babc3409a5c117a3a61de12c3 370 Gene3D G3DSA:2.40.50.100 92 225 2.7E-11 T 14-10-2018 C3497_09935 6c4474b1ccd971706cf850aee8cc647c 150 SMART SM00422 22 91 2.4E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_09935 6c4474b1ccd971706cf850aee8cc647c 150 Pfam PF09278 MerR, DNA binding 65 126 8.2E-19 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding C3497_09935 6c4474b1ccd971706cf850aee8cc647c 150 Gene3D G3DSA:1.10.1660.10 13 145 1.1E-30 T 14-10-2018 C3497_09935 6c4474b1ccd971706cf850aee8cc647c 150 Pfam PF00376 MerR family regulatory protein 23 51 4.6E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_09935 6c4474b1ccd971706cf850aee8cc647c 150 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 34 47 5.6E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_09935 6c4474b1ccd971706cf850aee8cc647c 150 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 58 78 5.6E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_09935 6c4474b1ccd971706cf850aee8cc647c 150 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 23 34 5.6E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_09935 6c4474b1ccd971706cf850aee8cc647c 150 SUPERFAMILY SSF46955 22 144 1.47E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3497_13170 96d631f38e70981d41769ff646e0ad46 238 SUPERFAMILY SSF54211 1 181 1.82E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_13170 96d631f38e70981d41769ff646e0ad46 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 45.943 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 C3497_13170 96d631f38e70981d41769ff646e0ad46 238 SUPERFAMILY SSF55666 151 236 2.36E-26 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_13170 96d631f38e70981d41769ff646e0ad46 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 2.1E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_13170 96d631f38e70981d41769ff646e0ad46 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.0E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_13170 96d631f38e70981d41769ff646e0ad46 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.0E-115 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 C3497_13170 96d631f38e70981d41769ff646e0ad46 238 Gene3D G3DSA:3.30.230.70 9 238 1.6E-62 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_13170 96d631f38e70981d41769ff646e0ad46 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site C3497_07865 1246474f1c21f3b0ba002030b6b14049 326 SUPERFAMILY SSF50974 10 325 2.88E-73 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 C3497_07865 1246474f1c21f3b0ba002030b6b14049 326 Gene3D G3DSA:2.130.10.10 26 228 5.7E-59 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C3497_07865 1246474f1c21f3b0ba002030b6b14049 326 Gene3D G3DSA:2.130.10.10 229 325 1.0E-21 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C3497_07865 1246474f1c21f3b0ba002030b6b14049 326 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 20 325 1.3E-101 T 14-10-2018 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein C3497_07865 1246474f1c21f3b0ba002030b6b14049 326 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 108 149 4.2E-9 T 14-10-2018 IPR011964 YVTN beta-propeller repeat C3497_07865 1246474f1c21f3b0ba002030b6b14049 326 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 150 191 1.5E-11 T 14-10-2018 IPR011964 YVTN beta-propeller repeat C3497_07865 1246474f1c21f3b0ba002030b6b14049 326 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 285 324 3.2E-8 T 14-10-2018 IPR011964 YVTN beta-propeller repeat C3497_07865 1246474f1c21f3b0ba002030b6b14049 326 Pfam PF10282 Lactonase, 7-bladed beta-propeller 147 305 3.2E-7 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller C3497_09090 0827b67f327af81d8fa25463da205c0d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 4.9E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_09090 0827b67f327af81d8fa25463da205c0d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 4.9E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_09090 0827b67f327af81d8fa25463da205c0d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 4.9E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_09090 0827b67f327af81d8fa25463da205c0d 155 Gene3D G3DSA:1.10.10.10 1 55 2.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_09090 0827b67f327af81d8fa25463da205c0d 155 SMART SM00344 4 113 1.2E-51 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 C3497_09090 0827b67f327af81d8fa25463da205c0d 155 Gene3D G3DSA:3.30.70.920 56 149 2.0E-22 T 14-10-2018 C3497_09090 0827b67f327af81d8fa25463da205c0d 155 SUPERFAMILY SSF54909 66 152 2.15E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3497_09090 0827b67f327af81d8fa25463da205c0d 155 SUPERFAMILY SSF46785 3 63 5.35E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_09090 0827b67f327af81d8fa25463da205c0d 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 5.4E-21 T 14-10-2018 C3497_09090 0827b67f327af81d8fa25463da205c0d 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site C3497_09090 0827b67f327af81d8fa25463da205c0d 155 Pfam PF01037 Lrp/AsnC ligand binding domain 70 144 1.2E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain C3497_10440 20dd3a9da5296cfbeeee3ed2d46510c1 646 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 561 3.7E-143 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 C3497_10440 20dd3a9da5296cfbeeee3ed2d46510c1 646 SUPERFAMILY SSF52402 234 621 1.49E-85 T 14-10-2018 C3497_10440 20dd3a9da5296cfbeeee3ed2d46510c1 646 Pfam PF13537 Glutamine amidotransferase domain 48 167 1.2E-48 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain C3497_10440 20dd3a9da5296cfbeeee3ed2d46510c1 646 Gene3D G3DSA:3.60.20.10 2 186 2.0E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_10440 20dd3a9da5296cfbeeee3ed2d46510c1 646 Pfam PF00733 Asparagine synthase 243 626 1.1E-94 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 C3497_10440 20dd3a9da5296cfbeeee3ed2d46510c1 646 PIRSF PIRSF001589 1 643 3.8E-176 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 C3497_10440 20dd3a9da5296cfbeeee3ed2d46510c1 646 TIGRFAM TIGR03108 eps_aminotran_1: exosortase A system-associated amidotransferase 1 1 627 0.0 T 14-10-2018 IPR017539 Exosortase 1 system-associated amidotransferase 1 C3497_10440 20dd3a9da5296cfbeeee3ed2d46510c1 646 SUPERFAMILY SSF56235 1 226 3.43E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_10715 f1e0eb208e0c485cef8a0468c3220b84 321 Gene3D G3DSA:3.30.2010.10 77 166 2.0E-22 T 14-10-2018 C3497_10715 f1e0eb208e0c485cef8a0468c3220b84 321 Pfam PF01435 Peptidase family M48 82 285 3.1E-31 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3497_05175 04d6d8d946f7522d2027e6d4656ef45c 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 1.2E-78 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 C3497_05175 04d6d8d946f7522d2027e6d4656ef45c 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 76.902 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein C3497_01795 420f6cf5a77a88307552f06c216521bd 115 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 58 107 2.1E-18 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3497_01795 420f6cf5a77a88307552f06c216521bd 115 Gene3D G3DSA:1.20.5.1030 54 111 4.0E-16 T 14-10-2018 IPR038379 SecE superfamily C3497_01795 420f6cf5a77a88307552f06c216521bd 115 Hamap MF_00422 Protein translocase subunit SecE [secE]. 54 111 11.256 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3497_01795 420f6cf5a77a88307552f06c216521bd 115 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 57 109 1.3E-16 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C3497_01795 420f6cf5a77a88307552f06c216521bd 115 PRINTS PR01650 Bacterial translocase SecE signature 77 97 1.0E-15 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C3497_01795 420f6cf5a77a88307552f06c216521bd 115 PRINTS PR01650 Bacterial translocase SecE signature 32 53 1.0E-15 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C3497_01795 420f6cf5a77a88307552f06c216521bd 115 PRINTS PR01650 Bacterial translocase SecE signature 53 73 1.0E-15 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C3497_04800 b3b5e1f4e273f1a30f4ec8ae1d873420 414 Pfam PF02754 Cysteine-rich domain 307 390 1.4E-9 T 14-10-2018 IPR004017 Cysteine-rich domain C3497_04800 b3b5e1f4e273f1a30f4ec8ae1d873420 414 Pfam PF02754 Cysteine-rich domain 173 255 1.9E-9 T 14-10-2018 IPR004017 Cysteine-rich domain C3497_04800 b3b5e1f4e273f1a30f4ec8ae1d873420 414 Gene3D G3DSA:1.10.1060.10 2 106 7.3E-10 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3497_04800 b3b5e1f4e273f1a30f4ec8ae1d873420 414 PIRSF PIRSF000139 6 413 3.8E-112 T 14-10-2018 C3497_04800 b3b5e1f4e273f1a30f4ec8ae1d873420 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_04800 b3b5e1f4e273f1a30f4ec8ae1d873420 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_04800 b3b5e1f4e273f1a30f4ec8ae1d873420 414 Pfam PF12838 4Fe-4S dicluster domain 24 89 7.1E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_04800 b3b5e1f4e273f1a30f4ec8ae1d873420 414 SUPERFAMILY SSF54862 21 118 1.59E-21 T 14-10-2018 C3497_01570 f97cc08eaf8cf648765e95c1d6aa7c88 315 Gene3D G3DSA:3.40.190.10 29 312 2.0E-100 T 14-10-2018 C3497_01570 f97cc08eaf8cf648765e95c1d6aa7c88 315 Gene3D G3DSA:3.40.190.10 113 249 2.0E-100 T 14-10-2018 C3497_01570 f97cc08eaf8cf648765e95c1d6aa7c88 315 Pfam PF16868 NMT1-like family 29 312 2.8E-94 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family C3497_01570 f97cc08eaf8cf648765e95c1d6aa7c88 315 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 312 8.2E-113 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family C3497_01570 f97cc08eaf8cf648765e95c1d6aa7c88 315 SUPERFAMILY SSF53850 23 314 1.73E-77 T 14-10-2018 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 Gene3D G3DSA:3.40.640.10 361 611 8.4E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 Pfam PF00491 Arginase family 15 289 3.0E-49 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 Pfam PF00202 Aminotransferase class-III 319 697 1.6E-110 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 526 563 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 SUPERFAMILY SSF53383 309 701 1.31E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 Gene3D G3DSA:3.90.1150.10 315 691 8.4E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 312 700 2.7E-148 T 14-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 Gene3D G3DSA:3.40.800.10 9 309 6.7E-73 T 14-10-2018 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 SUPERFAMILY SSF52768 14 303 3.6E-61 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 PRINTS PR00116 Arginase signature 129 156 1.0E-27 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 PRINTS PR00116 Arginase signature 103 118 1.0E-27 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 PRINTS PR00116 Arginase signature 265 279 1.0E-27 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 PRINTS PR00116 Arginase signature 230 259 1.0E-27 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 PRINTS PR00116 Arginase signature 181 199 1.0E-27 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 C3497_00950 5f9ba18224747c873569ea7c5e3767a7 712 ProSitePatterns PS01053 Arginase family signature. 233 254 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 SUPERFAMILY SSF55124 1 126 6.87E-33 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 PRINTS PR00397 Sirohaem Fe-binding site signature 410 428 1.0E-4 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 PRINTS PR00397 Sirohaem Fe-binding site signature 456 474 1.0E-4 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 SUPERFAMILY SSF55124 252 421 1.49E-26 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 273 1.7E-41 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 Gene3D G3DSA:3.30.413.10 408 562 3.5E-34 T 14-10-2018 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 SUPERFAMILY SSF56014 120 285 4.71E-49 T 14-10-2018 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 Gene3D G3DSA:3.30.413.10 119 318 2.1E-81 T 14-10-2018 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 453 547 1.0E-11 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 SUPERFAMILY SSF56014 409 550 6.8E-41 T 14-10-2018 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 Gene3D G3DSA:3.90.480.10 53 389 2.1E-81 T 14-10-2018 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 4.3E-17 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_00115 1a4e0c14f9a2772a6958d15780f68298 564 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 330 398 1.9E-17 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_09410 c13b36bf38ba54ce1c266f1889dda57e 375 Pfam PF06804 NlpB/DapX lipoprotein 30 371 9.1E-52 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein C3497_09410 c13b36bf38ba54ce1c266f1889dda57e 375 Gene3D G3DSA:3.30.310.170 249 375 1.6E-13 T 14-10-2018 C3497_05080 22812896a9aa124919132ae013f0dffe 499 SUPERFAMILY SSF55681 158 497 4.24E-116 T 14-10-2018 C3497_05080 22812896a9aa124919132ae013f0dffe 499 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 13 498 2.3E-202 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3497_05080 22812896a9aa124919132ae013f0dffe 499 Pfam PF01336 OB-fold nucleic acid binding domain 65 142 2.3E-17 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 C3497_05080 22812896a9aa124919132ae013f0dffe 499 Gene3D G3DSA:2.40.50.140 12 150 5.0E-42 T 14-10-2018 C3497_05080 22812896a9aa124919132ae013f0dffe 499 SUPERFAMILY SSF50249 10 151 9.21E-44 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_05080 22812896a9aa124919132ae013f0dffe 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 7.1E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3497_05080 22812896a9aa124919132ae013f0dffe 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 7.1E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3497_05080 22812896a9aa124919132ae013f0dffe 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 381 397 7.1E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3497_05080 22812896a9aa124919132ae013f0dffe 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 7.1E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3497_05080 22812896a9aa124919132ae013f0dffe 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 7.1E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3497_05080 22812896a9aa124919132ae013f0dffe 499 Pfam PF00152 tRNA synthetases class II (D, K and N) 160 496 1.5E-83 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_05080 22812896a9aa124919132ae013f0dffe 499 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 18 499 44.244 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3497_05080 22812896a9aa124919132ae013f0dffe 499 Gene3D G3DSA:3.30.930.10 154 499 2.4E-129 T 14-10-2018 C3497_01470 fca7154a794b9621c98bcd100ee9acd8 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 14 296 19.501 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 C3497_01470 fca7154a794b9621c98bcd100ee9acd8 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site C3497_01470 fca7154a794b9621c98bcd100ee9acd8 299 Pfam PF01040 UbiA prenyltransferase family 31 277 1.7E-58 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 C3497_01470 fca7154a794b9621c98bcd100ee9acd8 299 Gene3D G3DSA:1.10.357.140 23 180 3.4E-18 T 14-10-2018 C3497_01470 fca7154a794b9621c98bcd100ee9acd8 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 17 295 4.8E-95 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 C3497_00330 2721fdc10ed13343515f8d3545b860b3 108 Gene3D G3DSA:3.30.920.10 1 105 1.7E-32 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_00330 2721fdc10ed13343515f8d3545b860b3 108 Pfam PF01491 Frataxin-like domain 1 101 1.4E-22 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_00330 2721fdc10ed13343515f8d3545b860b3 108 SUPERFAMILY SSF55387 1 101 2.09E-27 T 14-10-2018 C3497_00330 2721fdc10ed13343515f8d3545b860b3 108 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 104 22.437 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_00330 2721fdc10ed13343515f8d3545b860b3 108 ProSitePatterns PS01344 Frataxin family signature. 49 63 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_00330 2721fdc10ed13343515f8d3545b860b3 108 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 3 103 1.1E-32 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_00330 2721fdc10ed13343515f8d3545b860b3 108 SMART SM01219 1 105 8.5E-42 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_11485 b440cdbf67375594cf1858d115a5f11b 331 SUPERFAMILY SSF53697 18 328 2.45E-66 T 14-10-2018 C3497_11485 b440cdbf67375594cf1858d115a5f11b 331 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 52 320 6.0E-106 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 C3497_11485 b440cdbf67375594cf1858d115a5f11b 331 PIRSF PIRSF004692 2 331 5.5E-128 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 C3497_11485 b440cdbf67375594cf1858d115a5f11b 331 Pfam PF00571 CBS domain 208 265 5.7E-7 T 14-10-2018 IPR000644 CBS domain C3497_11485 b440cdbf67375594cf1858d115a5f11b 331 Pfam PF00571 CBS domain 276 328 6.6E-9 T 14-10-2018 IPR000644 CBS domain C3497_11485 b440cdbf67375594cf1858d115a5f11b 331 Gene3D G3DSA:3.10.580.10 203 328 1.3E-40 T 14-10-2018 C3497_11485 b440cdbf67375594cf1858d115a5f11b 331 Pfam PF01380 SIS domain 48 179 1.1E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C3497_11485 b440cdbf67375594cf1858d115a5f11b 331 SMART SM00116 282 330 0.013 T 14-10-2018 IPR000644 CBS domain C3497_11485 b440cdbf67375594cf1858d115a5f11b 331 SMART SM00116 217 265 0.0077 T 14-10-2018 IPR000644 CBS domain C3497_11485 b440cdbf67375594cf1858d115a5f11b 331 Gene3D G3DSA:3.40.50.10490 9 202 4.8E-66 T 14-10-2018 C3497_07170 356a2a513fcb80de891a7cdee1938c18 254 PIRSF PIRSF005457 1 254 3.0E-94 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C3497_07170 356a2a513fcb80de891a7cdee1938c18 254 SMART SM00849 12 166 1.1E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_07170 356a2a513fcb80de891a7cdee1938c18 254 Pfam PF00753 Metallo-beta-lactamase superfamily 13 166 2.2E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_07170 356a2a513fcb80de891a7cdee1938c18 254 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 254 1.6E-24 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C3497_07170 356a2a513fcb80de891a7cdee1938c18 254 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 254 1.3E-96 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C3497_07170 356a2a513fcb80de891a7cdee1938c18 254 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 254 41.891 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C3497_07170 356a2a513fcb80de891a7cdee1938c18 254 Gene3D G3DSA:3.60.15.10 2 254 5.6E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_07170 356a2a513fcb80de891a7cdee1938c18 254 SUPERFAMILY SSF56281 4 254 1.21E-66 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 Gene3D G3DSA:1.20.120.140 4 305 2.7E-121 T 14-10-2018 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 SMART SM00382 99 270 6.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 SMART SM00962 100 296 3.8E-110 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 430 3.5E-172 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 SUPERFAMILY SSF52540 42 358 1.91E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.6E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 Gene3D G3DSA:1.10.260.30 328 449 4.1E-42 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 SUPERFAMILY SSF47446 329 431 6.54E-33 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 Pfam PF02978 Signal peptide binding domain 329 428 8.5E-31 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 32.983 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.6E-70 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 Gene3D G3DSA:3.40.50.300 90 285 2.7E-121 T 14-10-2018 C3497_10260 e4af8bb0b7678e732018956c4f3505c8 453 SMART SM00963 1 86 1.2E-36 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_14685 3b16f03027698612b33507a40deb90d2 95 SUPERFAMILY SSF141000 3 93 2.22E-28 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 C3497_14685 3b16f03027698612b33507a40deb90d2 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 23.092 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 C3497_14685 3b16f03027698612b33507a40deb90d2 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 8.1E-30 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 C3497_14685 3b16f03027698612b33507a40deb90d2 95 Gene3D G3DSA:1.10.20.60 1 93 2.1E-22 T 14-10-2018 C3497_14685 3b16f03027698612b33507a40deb90d2 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.9E-18 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SMART SM00091 589 656 74.0 T 14-10-2018 IPR000014 PAS domain C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SMART SM00091 331 398 0.4 T 14-10-2018 IPR000014 PAS domain C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SMART SM00091 458 525 2.5 T 14-10-2018 IPR000014 PAS domain C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Gene3D G3DSA:3.30.450.20 448 580 9.0E-16 T 14-10-2018 C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Gene3D G3DSA:3.30.450.20 581 710 7.0E-13 T 14-10-2018 C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SUPERFAMILY SSF55785 574 703 7.33E-10 T 14-10-2018 IPR035965 PAS domain superfamily C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Gene3D G3DSA:2.10.70.100 402 447 2.6E-12 T 14-10-2018 C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SUPERFAMILY SSF141868 892 1141 1.44E-95 T 14-10-2018 IPR035919 EAL domain superfamily C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 712 875 2.1E-45 T 14-10-2018 IPR000160 GGDEF domain C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SMART SM00267 705 877 6.3E-70 T 14-10-2018 IPR000160 GGDEF domain C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SMART SM00086 538 577 32.0 T 14-10-2018 IPR001610 PAC motif C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SMART SM00086 404 446 1.4E-4 T 14-10-2018 IPR001610 PAC motif C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SUPERFAMILY SSF55073 721 879 4.39E-52 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SUPERFAMILY SSF55785 443 575 4.89E-12 T 14-10-2018 IPR035965 PAS domain superfamily C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Pfam PF00563 EAL domain 893 1128 1.8E-78 T 14-10-2018 IPR001633 EAL domain C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Gene3D G3DSA:3.20.20.450 891 1142 1.2E-106 T 14-10-2018 IPR035919 EAL domain superfamily C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Gene3D G3DSA:3.30.450.20 328 397 1.5E-17 T 14-10-2018 C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Pfam PF00990 Diguanylate cyclase, GGDEF domain 716 871 2.9E-50 T 14-10-2018 IPR000160 GGDEF domain C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Pfam PF08447 PAS fold 354 439 6.5E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Pfam PF12860 PAS fold 464 581 8.9E-32 T 14-10-2018 C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Pfam PF12860 PAS fold 595 709 8.3E-37 T 14-10-2018 C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 Gene3D G3DSA:3.30.70.270 711 890 5.9E-64 T 14-10-2018 C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SMART SM00052 887 1133 6.3E-125 T 14-10-2018 IPR001633 EAL domain C3497_14320 f36e7e79d51ab9248a072616375a56cc 1146 SUPERFAMILY SSF55785 338 446 1.62E-15 T 14-10-2018 IPR035965 PAS domain superfamily C3497_08040 832285e70867e1d39ae7fae5e760d6a5 304 Gene3D G3DSA:1.10.10.10 6 93 4.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_08040 832285e70867e1d39ae7fae5e760d6a5 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 7.7E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_08040 832285e70867e1d39ae7fae5e760d6a5 304 Gene3D G3DSA:3.40.190.10 162 259 5.3E-34 T 14-10-2018 C3497_08040 832285e70867e1d39ae7fae5e760d6a5 304 Gene3D G3DSA:3.40.190.10 102 286 5.3E-34 T 14-10-2018 C3497_08040 832285e70867e1d39ae7fae5e760d6a5 304 Pfam PF03466 LysR substrate binding domain 91 290 1.1E-23 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_08040 832285e70867e1d39ae7fae5e760d6a5 304 SUPERFAMILY SSF46785 5 86 6.39E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_08040 832285e70867e1d39ae7fae5e760d6a5 304 SUPERFAMILY SSF53850 93 291 7.6E-28 T 14-10-2018 C3497_02860 e48d682c9d4376f47b00c5f9fa04031b 233 SUPERFAMILY SSF75217 70 231 4.77E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3497_02860 e48d682c9d4376f47b00c5f9fa04031b 233 SMART SM00967 1 70 2.0E-7 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 C3497_02860 e48d682c9d4376f47b00c5f9fa04031b 233 Gene3D G3DSA:3.30.1330.30 1 65 3.8E-12 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like C3497_02860 e48d682c9d4376f47b00c5f9fa04031b 233 SUPERFAMILY SSF55315 1 65 2.0E-13 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like C3497_02860 e48d682c9d4376f47b00c5f9fa04031b 233 Pfam PF00588 SpoU rRNA Methylase family 85 225 8.0E-40 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C3497_02860 e48d682c9d4376f47b00c5f9fa04031b 233 Gene3D G3DSA:3.40.1280.10 66 232 8.0E-60 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3497_02860 e48d682c9d4376f47b00c5f9fa04031b 233 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 1 232 40.566 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB C3497_02860 e48d682c9d4376f47b00c5f9fa04031b 233 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 18 231 4.7E-68 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 C3497_02860 e48d682c9d4376f47b00c5f9fa04031b 233 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 1 68 3.8E-12 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 C3497_07465 1538116f42d9c3267e89bb20f95f0786 281 SUPERFAMILY SSF53335 9 279 2.02E-96 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_07465 1538116f42d9c3267e89bb20f95f0786 281 Gene3D G3DSA:3.40.50.150 1 280 4.4E-113 T 14-10-2018 C3497_07465 1538116f42d9c3267e89bb20f95f0786 281 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 275 9.2E-82 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 C3497_07465 1538116f42d9c3267e89bb20f95f0786 281 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 268 41.82 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 C3497_06685 2fb711f7ff5b476658d86093744876bd 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 1.5E-15 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3497_06685 2fb711f7ff5b476658d86093744876bd 598 Gene3D G3DSA:2.40.110.10 160 283 8.7E-99 T 14-10-2018 C3497_06685 2fb711f7ff5b476658d86093744876bd 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 1.5E-12 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria C3497_06685 2fb711f7ff5b476658d86093744876bd 598 Gene3D G3DSA:1.10.540.10 46 159 8.7E-99 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3497_06685 2fb711f7ff5b476658d86093744876bd 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 2.4E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3497_06685 2fb711f7ff5b476658d86093744876bd 598 SUPERFAMILY SSF47203 282 460 2.26E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3497_06685 2fb711f7ff5b476658d86093744876bd 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 593 3.3E-31 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain C3497_06685 2fb711f7ff5b476658d86093744876bd 598 Gene3D G3DSA:1.20.140.10 284 448 8.7E-99 T 14-10-2018 C3497_06685 2fb711f7ff5b476658d86093744876bd 598 SUPERFAMILY SSF56645 38 280 1.05E-62 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3497_06685 2fb711f7ff5b476658d86093744876bd 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 450 1.8E-24 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3497_09625 290da1764a90d111160049a64da87555 325 Gene3D G3DSA:3.30.420.10 131 311 2.3E-28 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_09625 290da1764a90d111160049a64da87555 325 Pfam PF00665 Integrase core domain 137 257 2.7E-24 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3497_09625 290da1764a90d111160049a64da87555 325 SUPERFAMILY SSF46689 22 110 1.88E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_09625 290da1764a90d111160049a64da87555 325 SUPERFAMILY SSF53098 134 308 1.77E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_04130 615df45017c726f07ace365c3c747d75 241 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 2.2E-84 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 C3497_04130 615df45017c726f07ace365c3c747d75 241 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 107.991 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 C3497_04130 615df45017c726f07ace365c3c747d75 241 Pfam PF00149 Calcineurin-like phosphoesterase 1 200 4.9E-7 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C3497_04130 615df45017c726f07ace365c3c747d75 241 SUPERFAMILY SSF56300 1 208 1.65E-28 T 14-10-2018 C3497_04130 615df45017c726f07ace365c3c747d75 241 Gene3D G3DSA:3.60.21.10 1 214 1.6E-13 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C3497_04305 1ad9435a1a27c0ea71c2f28330ac412a 76 Gene3D G3DSA:3.40.30.10 1 76 1.9E-24 T 14-10-2018 C3497_04305 1ad9435a1a27c0ea71c2f28330ac412a 76 Pfam PF13192 Thioredoxin domain 3 75 5.5E-23 T 14-10-2018 IPR012336 Thioredoxin-like fold C3497_04305 1ad9435a1a27c0ea71c2f28330ac412a 76 PIRSF PIRSF037031 1 76 5.6E-28 T 14-10-2018 IPR005243 Redox-active disulphide protein 2 C3497_04305 1ad9435a1a27c0ea71c2f28330ac412a 76 SUPERFAMILY SSF52833 2 75 1.88E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_11625 d6eae3191135310d04564d01d8823746 380 Gene3D G3DSA:3.30.470.20 181 377 4.1E-73 T 14-10-2018 C3497_11625 d6eae3191135310d04564d01d8823746 380 SUPERFAMILY SSF51246 303 371 1.41E-14 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C3497_11625 d6eae3191135310d04564d01d8823746 380 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 361 39.657 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 C3497_11625 d6eae3191135310d04564d01d8823746 380 SUPERFAMILY SSF56059 103 298 1.38E-56 T 14-10-2018 C3497_11625 d6eae3191135310d04564d01d8823746 380 Gene3D G3DSA:3.40.50.20 1 107 1.9E-39 T 14-10-2018 C3497_11625 d6eae3191135310d04564d01d8823746 380 Gene3D G3DSA:3.30.1490.20 108 180 8.7E-18 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_11625 d6eae3191135310d04564d01d8823746 380 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 364 1.6E-114 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 C3497_11625 d6eae3191135310d04564d01d8823746 380 SUPERFAMILY SSF52440 7 101 2.45E-26 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3497_11625 d6eae3191135310d04564d01d8823746 380 Pfam PF02222 ATP-grasp domain 114 279 5.6E-46 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type C3497_13035 711967b264fb36fe1fa21d6ffff9075b 407 SUPERFAMILY SSF48452 149 255 1.12E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_13035 711967b264fb36fe1fa21d6ffff9075b 407 Pfam PF13432 Tetratricopeptide repeat 148 191 0.0034 T 14-10-2018 C3497_13035 711967b264fb36fe1fa21d6ffff9075b 407 Pfam PF13432 Tetratricopeptide repeat 212 263 4.5E-6 T 14-10-2018 C3497_13035 711967b264fb36fe1fa21d6ffff9075b 407 Gene3D G3DSA:1.25.40.10 141 279 1.1E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_13035 711967b264fb36fe1fa21d6ffff9075b 407 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 121 3.6E-24 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI C3497_10015 c166948dfd102967df1e20187f8720e1 211 SUPERFAMILY SSF46626 16 203 9.85E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_10015 c166948dfd102967df1e20187f8720e1 211 Gene3D G3DSA:1.10.760.10 50 211 5.5E-67 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_10015 c166948dfd102967df1e20187f8720e1 211 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 186 3.7E-82 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO C3497_10015 c166948dfd102967df1e20187f8720e1 211 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 6 186 1.0E-76 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO C3497_09840 0d4f02960658858d158be960f5e96bef 256 SMART SM01040 14 100 8.8E-43 T 14-10-2018 IPR003497 BRO N-terminal domain C3497_09840 0d4f02960658858d158be960f5e96bef 256 Pfam PF02498 BRO family, N-terminal domain 14 100 8.6E-27 T 14-10-2018 IPR003497 BRO N-terminal domain C3497_10120 ee345ce59631d8ba6153c3f3042a7c58 588 SUPERFAMILY SSF52540 178 567 1.02E-105 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10120 ee345ce59631d8ba6153c3f3042a7c58 588 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 386 400 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_10120 ee345ce59631d8ba6153c3f3042a7c58 588 SUPERFAMILY SSF160246 9 148 1.7E-39 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C3497_10120 ee345ce59631d8ba6153c3f3042a7c58 588 SMART SM00382 319 440 5.3E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10120 ee345ce59631d8ba6153c3f3042a7c58 588 Pfam PF00437 Type II/IV secretion system protein 197 458 1.5E-82 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_10120 ee345ce59631d8ba6153c3f3042a7c58 588 Gene3D G3DSA:3.30.300.160 68 148 3.5E-6 T 14-10-2018 C3497_10120 ee345ce59631d8ba6153c3f3042a7c58 588 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 47 150 1.9E-19 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal C3497_10120 ee345ce59631d8ba6153c3f3042a7c58 588 Gene3D G3DSA:3.40.50.300 293 572 3.2E-110 T 14-10-2018 C3497_10120 ee345ce59631d8ba6153c3f3042a7c58 588 Gene3D G3DSA:3.30.450.90 155 291 2.4E-45 T 14-10-2018 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 Gene3D G3DSA:3.20.190.10 2 128 1.1E-31 T 14-10-2018 IPR035937 MutM-like, N-terminal C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 112 3.9E-27 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 8.4E-12 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 Gene3D G3DSA:1.10.8.50 143 270 1.7E-45 T 14-10-2018 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 42.247 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 SUPERFAMILY SSF81624 2 139 1.02E-36 T 14-10-2018 IPR035937 MutM-like, N-terminal C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 SMART SM01232 130 222 1.9E-41 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 4.5E-23 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 SUPERFAMILY SSF46946 131 222 5.74E-27 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 SMART SM00898 2 115 7.4E-44 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 8.6E-84 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 C3497_02565 b7856604178cf0025e53dd082c7cbd48 275 SUPERFAMILY SSF57716 218 270 1.6E-18 T 14-10-2018 C3497_02300 dbca46eb80a13f5c02c1467badfaa711 455 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 77 417 1.9E-44 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3497_02300 dbca46eb80a13f5c02c1467badfaa711 455 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 14 430 1.0E-187 T 14-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_02300 dbca46eb80a13f5c02c1467badfaa711 455 PIRSF PIRSF001413 10 436 1.5E-110 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_02300 dbca46eb80a13f5c02c1467badfaa711 455 Gene3D G3DSA:3.40.50.1100 14 423 1.6E-166 T 14-10-2018 C3497_02300 dbca46eb80a13f5c02c1467badfaa711 455 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 105 119 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_02300 dbca46eb80a13f5c02c1467badfaa711 455 PIRSF PIRSF500824 2 439 2.0E-199 T 14-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_02300 dbca46eb80a13f5c02c1467badfaa711 455 SUPERFAMILY SSF53686 32 428 2.1E-107 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3497_02300 dbca46eb80a13f5c02c1467badfaa711 455 Gene3D G3DSA:3.40.50.1100 15 238 1.6E-166 T 14-10-2018 C3497_02300 dbca46eb80a13f5c02c1467badfaa711 455 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 22 430 38.181 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 SUPERFAMILY SSF81660 348 549 9.32E-51 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 Pfam PF00122 E1-E2 ATPase 130 321 4.2E-49 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 612 735 1.7E-33 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 99 362 2.4E-41 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 SUPERFAMILY SSF56784 339 751 7.7E-63 T 14-10-2018 IPR036412 HAD-like superfamily C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 Gene3D G3DSA:1.20.1110.10 71 901 4.2E-290 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 SMART SM00831 19 93 2.7E-30 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 Pfam PF00689 Cation transporting ATPase, C-terminus 731 903 4.4E-44 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 261 283 5.0E-16 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 94 114 5.0E-16 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 472 490 5.0E-16 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 334 355 5.0E-16 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 Gene3D G3DSA:3.40.1110.10 351 552 4.2E-290 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 Gene3D G3DSA:2.70.150.10 38 243 4.2E-290 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 SUPERFAMILY SSF81653 131 239 6.28E-29 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 Pfam PF00690 Cation transporter/ATPase, N-terminus 25 87 2.0E-14 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 SUPERFAMILY SSF81665 21 905 5.75E-120 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 670 682 1.9E-39 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 341 355 1.9E-39 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 178 192 1.9E-39 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 646 665 1.9E-39 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 556 1.9E-39 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 567 577 1.9E-39 T 14-10-2018 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 343 349 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 Gene3D G3DSA:3.40.50.1000 338 691 4.2E-290 T 14-10-2018 IPR023214 HAD superfamily C3497_05705 79b792ba4e8e9ccedf5a209a7e2e8f27 920 Pfam PF00702 haloacid dehalogenase-like hydrolase 339 660 1.8E-23 T 14-10-2018 C3497_13575 c79176e17585b54b8adc22c0d892bb46 253 SUPERFAMILY SSF53850 25 251 8.42E-54 T 14-10-2018 C3497_13575 c79176e17585b54b8adc22c0d892bb46 253 Gene3D G3DSA:3.40.190.10 29 248 1.6E-66 T 14-10-2018 C3497_13575 c79176e17585b54b8adc22c0d892bb46 253 Gene3D G3DSA:3.40.190.10 104 210 1.6E-66 T 14-10-2018 C3497_13575 c79176e17585b54b8adc22c0d892bb46 253 PIRSF PIRSF004846 1 252 3.2E-59 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 C3497_13575 c79176e17585b54b8adc22c0d892bb46 253 Pfam PF13531 Bacterial extracellular solute-binding protein 26 248 4.1E-47 T 14-10-2018 C3497_13575 c79176e17585b54b8adc22c0d892bb46 253 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 247 3.1E-54 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00397 Sirohaem Fe-binding site signature 649 667 1.2E-5 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00397 Sirohaem Fe-binding site signature 692 710 1.2E-5 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_02890 c24528c8cc270797bad976004432edbd 838 SUPERFAMILY SSF51905 143 316 5.57E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 3.0E-17 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.0E-17 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.0E-17 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 3.0E-17 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 3.0E-17 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 Gene3D G3DSA:3.50.50.60 115 245 3.3E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02890 c24528c8cc270797bad976004432edbd 838 SUPERFAMILY SSF55124 532 654 6.05E-28 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_02890 c24528c8cc270797bad976004432edbd 838 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 692 708 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_02890 c24528c8cc270797bad976004432edbd 838 Gene3D G3DSA:1.10.10.1100 431 485 8.7E-10 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 SUPERFAMILY SSF51905 2 193 3.07E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02890 c24528c8cc270797bad976004432edbd 838 Pfam PF04324 BFD-like [2Fe-2S] binding domain 496 547 2.8E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain C3497_02890 c24528c8cc270797bad976004432edbd 838 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 480 1.1E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain C3497_02890 c24528c8cc270797bad976004432edbd 838 PIRSF PIRSF037149 1 833 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 C3497_02890 c24528c8cc270797bad976004432edbd 838 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 645 781 9.5E-24 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_02890 c24528c8cc270797bad976004432edbd 838 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 808 9.8E-274 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 C3497_02890 c24528c8cc270797bad976004432edbd 838 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 287 7.7E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3497_02890 c24528c8cc270797bad976004432edbd 838 SUPERFAMILY SSF56014 646 806 1.14E-46 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 572 636 1.0E-15 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 9.5E-12 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.5E-12 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 9.5E-12 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 253 9.5E-12 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 Gene3D G3DSA:3.30.413.10 644 810 7.1E-33 T 14-10-2018 C3497_02890 c24528c8cc270797bad976004432edbd 838 Gene3D G3DSA:3.50.50.60 7 294 3.3E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02890 c24528c8cc270797bad976004432edbd 838 Gene3D G3DSA:3.30.390.30 323 397 4.7E-8 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3497_10190 2e47fe14e286314add0050b0433af914 168 Pfam PF04390 Lipopolysaccharide-assembly 38 163 1.7E-10 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 C3497_10190 2e47fe14e286314add0050b0433af914 168 Gene3D G3DSA:3.30.160.150 38 168 9.0E-44 T 14-10-2018 C3497_10190 2e47fe14e286314add0050b0433af914 168 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 10 168 23.293 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 C3497_12830 6219f41d23df58fac76f1e2b8bb365d2 365 Pfam PF13439 Glycosyltransferase Family 4 14 172 7.1E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_12830 6219f41d23df58fac76f1e2b8bb365d2 365 Gene3D G3DSA:3.40.50.2000 14 171 5.3E-53 T 14-10-2018 C3497_12830 6219f41d23df58fac76f1e2b8bb365d2 365 Pfam PF00534 Glycosyl transferases group 1 196 336 2.7E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3497_12830 6219f41d23df58fac76f1e2b8bb365d2 365 SUPERFAMILY SSF53756 10 362 4.54E-65 T 14-10-2018 C3497_12830 6219f41d23df58fac76f1e2b8bb365d2 365 Gene3D G3DSA:3.40.50.2000 172 337 5.3E-53 T 14-10-2018 C3497_09320 955a91910c383b7eea6c61fa7b1b3d22 341 Gene3D G3DSA:2.10.70.40 224 277 1.9E-47 T 14-10-2018 C3497_09320 955a91910c383b7eea6c61fa7b1b3d22 341 PRINTS PR01002 Flagellar protein FlgJ signature 51 71 9.7E-18 T 14-10-2018 C3497_09320 955a91910c383b7eea6c61fa7b1b3d22 341 PRINTS PR01002 Flagellar protein FlgJ signature 26 49 9.7E-18 T 14-10-2018 C3497_09320 955a91910c383b7eea6c61fa7b1b3d22 341 PRINTS PR01002 Flagellar protein FlgJ signature 72 94 9.7E-18 T 14-10-2018 C3497_09320 955a91910c383b7eea6c61fa7b1b3d22 341 SMART SM00047 180 334 8.5E-33 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 C3497_09320 955a91910c383b7eea6c61fa7b1b3d22 341 Pfam PF10135 Rod binding protein 48 95 3.5E-15 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal C3497_09320 955a91910c383b7eea6c61fa7b1b3d22 341 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 196 333 2.1E-19 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 C3497_09320 955a91910c383b7eea6c61fa7b1b3d22 341 Gene3D G3DSA:1.10.530.10 190 330 1.9E-47 T 14-10-2018 C3497_09320 955a91910c383b7eea6c61fa7b1b3d22 341 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 9 331 1.1E-94 T 14-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 C3497_14590 e63aee8a54d0bce3c578e2025c82eeb0 289 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 5 102 7.5E-5 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 C3497_14590 e63aee8a54d0bce3c578e2025c82eeb0 289 SUPERFAMILY SSF55073 6 163 2.04E-21 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_14590 e63aee8a54d0bce3c578e2025c82eeb0 289 Gene3D G3DSA:3.30.70.1230 2 169 4.2E-20 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_14590 e63aee8a54d0bce3c578e2025c82eeb0 289 SMART SM00240 203 252 4.9E-7 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C3497_14590 e63aee8a54d0bce3c578e2025c82eeb0 289 SUPERFAMILY SSF49879 194 247 1.24E-15 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 C3497_14590 e63aee8a54d0bce3c578e2025c82eeb0 289 Gene3D G3DSA:2.60.200.20 180 275 8.5E-16 T 14-10-2018 C3497_14590 e63aee8a54d0bce3c578e2025c82eeb0 289 Pfam PF00498 FHA domain 205 255 2.7E-12 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C3497_00755 a0bdcfa26abeb432c2f4511c38ed60cc 344 Gene3D G3DSA:3.40.50.2300 2 131 2.1E-32 T 14-10-2018 C3497_00755 a0bdcfa26abeb432c2f4511c38ed60cc 344 SMART SM00471 162 299 3.8E-10 T 14-10-2018 IPR003607 HD/PDEase domain C3497_00755 a0bdcfa26abeb432c2f4511c38ed60cc 344 SUPERFAMILY SSF109604 150 330 5.65E-44 T 14-10-2018 C3497_00755 a0bdcfa26abeb432c2f4511c38ed60cc 344 Gene3D G3DSA:1.10.3210.10 141 343 4.6E-73 T 14-10-2018 C3497_00755 a0bdcfa26abeb432c2f4511c38ed60cc 344 SMART SM00448 2 113 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_00755 a0bdcfa26abeb432c2f4511c38ed60cc 344 Pfam PF01966 HD domain 168 289 5.8E-20 T 14-10-2018 IPR006674 HD domain C3497_00755 a0bdcfa26abeb432c2f4511c38ed60cc 344 SUPERFAMILY SSF52172 4 148 6.12E-35 T 14-10-2018 IPR011006 CheY-like superfamily C3497_00755 a0bdcfa26abeb432c2f4511c38ed60cc 344 Pfam PF00072 Response regulator receiver domain 4 113 5.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_03365 76685829b02266bd07c403f82eda5ac8 414 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 4 414 2.1E-215 T 14-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 C3497_03365 76685829b02266bd07c403f82eda5ac8 414 SMART SM01329 26 410 4.3E-181 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 C3497_03365 76685829b02266bd07c403f82eda5ac8 414 SUPERFAMILY SSF53659 20 414 8.45E-144 T 14-10-2018 C3497_03365 76685829b02266bd07c403f82eda5ac8 414 Gene3D G3DSA:3.40.718.10 1 414 2.0E-181 T 14-10-2018 C3497_03365 76685829b02266bd07c403f82eda5ac8 414 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 301 320 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 C3497_03365 76685829b02266bd07c403f82eda5ac8 414 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 27 409 1.6E-117 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 C3497_11900 4715290bf6300e4764b55aa68ffab00d 381 Gene3D G3DSA:3.30.9.50 73 257 1.5E-68 T 14-10-2018 C3497_11900 4715290bf6300e4764b55aa68ffab00d 381 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 374 7.9E-96 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 C3497_11900 4715290bf6300e4764b55aa68ffab00d 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.7E-11 T 14-10-2018 C3497_11900 4715290bf6300e4764b55aa68ffab00d 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 299 1.7E-11 T 14-10-2018 C3497_11900 4715290bf6300e4764b55aa68ffab00d 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 268 283 1.7E-11 T 14-10-2018 C3497_11900 4715290bf6300e4764b55aa68ffab00d 381 Pfam PF01494 FAD binding domain 5 333 2.4E-19 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 C3497_11900 4715290bf6300e4764b55aa68ffab00d 381 SUPERFAMILY SSF51905 4 375 5.33E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_11900 4715290bf6300e4764b55aa68ffab00d 381 Gene3D G3DSA:3.50.50.60 5 323 1.5E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_12435 285c18a19eac4a09801d553124d58fdc 638 Gene3D G3DSA:3.20.20.540 222 535 3.2E-153 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C3497_12435 285c18a19eac4a09801d553124d58fdc 638 Pfam PF13667 ThiC-associated domain 21 98 2.5E-34 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C3497_12435 285c18a19eac4a09801d553124d58fdc 638 Pfam PF01964 Radical SAM ThiC family 139 599 1.2E-200 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C3497_12435 285c18a19eac4a09801d553124d58fdc 638 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 602 8.7E-216 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C3497_12435 285c18a19eac4a09801d553124d58fdc 638 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 604 99.672 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C3497_06930 fb28f2edd3af5a9a34447b41c9d6c5f1 74 Gene3D G3DSA:3.10.290.10 1 70 1.5E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3497_06930 fb28f2edd3af5a9a34447b41c9d6c5f1 74 Pfam PF13275 S4 domain 5 67 5.2E-22 T 14-10-2018 C3497_06930 fb28f2edd3af5a9a34447b41c9d6c5f1 74 SUPERFAMILY SSF55174 3 68 7.2E-19 T 14-10-2018 C3497_04850 727a40d16f330cbeb56c3c42013c5dd5 481 Pfam PF00270 DEAD/DEAH box helicase 25 199 2.1E-52 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3497_04850 727a40d16f330cbeb56c3c42013c5dd5 481 SMART SM00487 20 225 3.1E-64 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_04850 727a40d16f330cbeb56c3c42013c5dd5 481 SUPERFAMILY SSF52540 78 361 2.51E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04850 727a40d16f330cbeb56c3c42013c5dd5 481 SMART SM00490 261 342 5.1E-34 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_04850 727a40d16f330cbeb56c3c42013c5dd5 481 Gene3D G3DSA:3.40.50.300 1 213 3.9E-81 T 14-10-2018 C3497_04850 727a40d16f330cbeb56c3c42013c5dd5 481 Pfam PF00271 Helicase conserved C-terminal domain 236 342 6.1E-29 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_04850 727a40d16f330cbeb56c3c42013c5dd5 481 Gene3D G3DSA:3.40.50.300 220 390 2.7E-50 T 14-10-2018 C3497_04850 727a40d16f330cbeb56c3c42013c5dd5 481 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 SUPERFAMILY SSF82866 319 521 1.57E-34 T 14-10-2018 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 Gene3D G3DSA:1.20.1640.10 28 535 2.8E-232 T 14-10-2018 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 SUPERFAMILY SSF82693 591 705 1.05E-10 T 14-10-2018 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 SUPERFAMILY SSF82866 844 1080 4.32E-42 T 14-10-2018 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 Gene3D G3DSA:3.30.70.1430 53 852 2.8E-232 T 14-10-2018 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 Gene3D G3DSA:3.30.70.1320 149 354 2.8E-232 T 14-10-2018 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 Gene3D G3DSA:3.30.2090.10 195 286 2.8E-232 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 Gene3D G3DSA:1.20.1640.10 536 1074 2.8E-232 T 14-10-2018 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 SUPERFAMILY SSF82714 753 839 2.49E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 Pfam PF00873 AcrB/AcrD/AcrF family 25 862 1.0E-118 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 Pfam PF00873 AcrB/AcrD/AcrF family 906 1075 9.7E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 Gene3D G3DSA:3.30.70.1430 595 705 2.8E-232 T 14-10-2018 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 SUPERFAMILY SSF82693 156 351 4.19E-9 T 14-10-2018 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 SUPERFAMILY SSF82714 199 282 1.01E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 Gene3D G3DSA:3.30.2090.10 754 844 2.8E-232 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 PRINTS PR00702 Acriflavin resistance protein family signature 360 383 3.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 PRINTS PR00702 Acriflavin resistance protein family signature 23 47 3.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 PRINTS PR00702 Acriflavin resistance protein family signature 414 438 3.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 3.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 PRINTS PR00702 Acriflavin resistance protein family signature 494 517 3.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 PRINTS PR00702 Acriflavin resistance protein family signature 51 69 3.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 Gene3D G3DSA:3.30.70.1440 706 924 2.8E-232 T 14-10-2018 C3497_02075 922463f8188505b7c230a5b100ae4ddb 1089 SUPERFAMILY SSF82693 53 136 5.76E-16 T 14-10-2018 C3497_09600 8039181527fa6fc1cf660fbfcf86480e 233 Gene3D G3DSA:3.40.50.150 9 231 4.5E-79 T 14-10-2018 C3497_09600 8039181527fa6fc1cf660fbfcf86480e 233 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 9 226 7.5E-87 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 C3497_09600 8039181527fa6fc1cf660fbfcf86480e 233 SUPERFAMILY SSF53335 12 225 4.71E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_09600 8039181527fa6fc1cf660fbfcf86480e 233 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 232 37.415 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 C3497_09600 8039181527fa6fc1cf660fbfcf86480e 233 Pfam PF13489 Methyltransferase domain 47 201 4.5E-26 T 14-10-2018 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 Gene3D G3DSA:3.10.20.600 390 471 8.9E-14 T 14-10-2018 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 Gene3D G3DSA:1.20.1440.230 474 572 4.4E-26 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 478 560 9.4E-25 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 325 340 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 151 1.1E-32 T 14-10-2018 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 SUPERFAMILY SSF142984 399 469 3.66E-12 T 14-10-2018 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 Gene3D G3DSA:1.10.10.1590 5 71 2.2E-10 T 14-10-2018 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 SUPERFAMILY SSF142019 193 398 2.48E-67 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 Gene3D G3DSA:3.40.30.10 72 166 6.2E-14 T 14-10-2018 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 207 375 8.1E-42 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 SUPERFAMILY SSF52833 9 174 6.49E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 SUPERFAMILY SSF140490 473 564 6.67E-29 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 Gene3D G3DSA:3.40.50.11540 210 389 4.2E-71 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 489 500 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04480 0b87dd0d442a847a43fdfdc5150348cb 601 SMART SM00928 476 521 1.8E-19 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_09095 88059c6266ad1d9a4f9a8edea18fe90b 432 Gene3D G3DSA:3.50.50.60 105 405 8.8E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_09095 88059c6266ad1d9a4f9a8edea18fe90b 432 SUPERFAMILY SSF51905 1 420 1.55E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_09095 88059c6266ad1d9a4f9a8edea18fe90b 432 SUPERFAMILY SSF54373 270 360 7.98E-20 T 14-10-2018 C3497_09095 88059c6266ad1d9a4f9a8edea18fe90b 432 Gene3D G3DSA:3.50.50.60 1 79 2.6E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_09095 88059c6266ad1d9a4f9a8edea18fe90b 432 Gene3D G3DSA:3.30.9.10 134 362 8.8E-55 T 14-10-2018 C3497_09095 88059c6266ad1d9a4f9a8edea18fe90b 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.886 T 14-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 C3497_09095 88059c6266ad1d9a4f9a8edea18fe90b 432 Pfam PF01266 FAD dependent oxidoreductase 3 398 3.7E-71 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 C3497_12960 8fa29a62ee7fe7ffbd277ef94e03accd 305 SUPERFAMILY SSF52418 76 303 2.09E-35 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3497_12960 8fa29a62ee7fe7ffbd277ef94e03accd 305 Gene3D G3DSA:3.40.1030.10 75 305 4.4E-76 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3497_12960 8fa29a62ee7fe7ffbd277ef94e03accd 305 Gene3D G3DSA:1.20.970.10 1 71 3.5E-26 T 14-10-2018 C3497_12960 8fa29a62ee7fe7ffbd277ef94e03accd 305 SUPERFAMILY SSF47648 7 70 3.27E-13 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3497_12960 8fa29a62ee7fe7ffbd277ef94e03accd 305 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 8.4E-10 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 Gene3D G3DSA:2.40.30.10 109 201 1.5E-19 T 14-10-2018 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 80 2.8E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 236 245 2.6E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 2.6E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 133 145 2.6E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 211 230 2.6E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 195 204 2.6E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 Gene3D G3DSA:3.10.20.30 1 96 2.1E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_08495 c902122e097d4e2b988f5248f10440bb 349 Gene3D G3DSA:3.40.50.80 205 333 3.4E-21 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_08495 c902122e097d4e2b988f5248f10440bb 349 Pfam PF00175 Oxidoreductase NAD-binding domain 213 313 1.2E-7 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 SUPERFAMILY SSF54292 1 94 8.39E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 Pfam PF00970 Oxidoreductase FAD-binding domain 114 200 3.5E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3497_08495 c902122e097d4e2b988f5248f10440bb 349 SUPERFAMILY SSF63380 98 201 9.53E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3497_08495 c902122e097d4e2b988f5248f10440bb 349 SUPERFAMILY SSF52343 205 332 1.83E-26 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 SUPERFAMILY SSF51569 21 332 2.93E-98 T 14-10-2018 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 SUPERFAMILY SSF89000 390 440 7.85E-15 T 14-10-2018 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 Pfam PF08502 LeuA allosteric (dimerisation) domain 424 555 3.2E-18 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 554 3.8E-233 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 39 55 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 Gene3D G3DSA:3.20.20.70 11 378 4.2E-152 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 SMART SM00917 424 556 2.9E-24 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 Gene3D G3DSA:3.30.160.270 379 555 1.4E-50 T 14-10-2018 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 557 52.333 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 245 258 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 Pfam PF00682 HMGL-like 33 315 1.1E-77 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C3497_13345 11dddcbe7586ec807cdb832d38c67adb 568 SUPERFAMILY SSF110921 446 555 2.75E-25 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3497_14725 8c4ff27d95902c0fdadc2a2cf90c0f47 167 SUPERFAMILY SSF56420 3 163 1.02E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily C3497_14725 8c4ff27d95902c0fdadc2a2cf90c0f47 167 PIRSF PIRSF004749 1 166 3.7E-54 T 14-10-2018 IPR023635 Peptide deformylase C3497_14725 8c4ff27d95902c0fdadc2a2cf90c0f47 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 159 7.9E-56 T 14-10-2018 IPR023635 Peptide deformylase C3497_14725 8c4ff27d95902c0fdadc2a2cf90c0f47 167 PRINTS PR01576 Peptide deformylase signature 120 149 3.8E-38 T 14-10-2018 IPR023635 Peptide deformylase C3497_14725 8c4ff27d95902c0fdadc2a2cf90c0f47 167 PRINTS PR01576 Peptide deformylase signature 89 100 3.8E-38 T 14-10-2018 IPR023635 Peptide deformylase C3497_14725 8c4ff27d95902c0fdadc2a2cf90c0f47 167 PRINTS PR01576 Peptide deformylase signature 33 62 3.8E-38 T 14-10-2018 IPR023635 Peptide deformylase C3497_14725 8c4ff27d95902c0fdadc2a2cf90c0f47 167 PRINTS PR01576 Peptide deformylase signature 101 119 3.8E-38 T 14-10-2018 IPR023635 Peptide deformylase C3497_14725 8c4ff27d95902c0fdadc2a2cf90c0f47 167 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.274 T 14-10-2018 IPR023635 Peptide deformylase C3497_14725 8c4ff27d95902c0fdadc2a2cf90c0f47 167 Gene3D G3DSA:3.90.45.10 1 166 3.2E-63 T 14-10-2018 IPR036821 Peptide deformylase superfamily C3497_14725 8c4ff27d95902c0fdadc2a2cf90c0f47 167 Pfam PF01327 Polypeptide deformylase 5 151 1.4E-50 T 14-10-2018 IPR023635 Peptide deformylase C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 SUPERFAMILY SSF52540 363 473 1.1E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 161 1089 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Gene3D G3DSA:3.30.2060.10 141 226 4.3E-114 T 14-10-2018 C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 SUPERFAMILY SSF52540 532 791 3.16E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Pfam PF02559 CarD-like/TRCF domain 488 583 1.0E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 41 1154 27.566 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 SMART SM01058 487 584 1.4E-48 T 14-10-2018 IPR003711 CarD-like/TRCF domain C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Pfam PF03461 TRCF domain 1017 1109 6.6E-27 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 SUPERFAMILY SSF52540 25 357 6.2E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 SUPERFAMILY SSF143517 1003 1151 7.85E-37 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Gene3D G3DSA:3.40.50.11140 363 460 1.1E-14 T 14-10-2018 C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Pfam PF00271 Helicase conserved C-terminal domain 815 917 2.4E-17 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Pfam PF00270 DEAD/DEAH box helicase 613 770 3.4E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 SMART SM00490 834 918 3.2E-18 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Gene3D G3DSA:3.40.50.11180 37 344 4.3E-114 T 14-10-2018 C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 SMART SM00487 608 798 5.6E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 SUPERFAMILY SSF141259 481 556 2.75E-23 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 SMART SM00982 1016 1116 4.3E-48 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Gene3D G3DSA:3.40.50.300 550 789 7.6E-233 T 14-10-2018 C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Gene3D G3DSA:3.90.1150.50 1013 1155 5.0E-37 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 SUPERFAMILY SSF52540 791 998 4.76E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Gene3D G3DSA:2.30.30.840 491 549 7.6E-233 T 14-10-2018 C3497_06505 9f9c6f969cf57c8630114c6a61ee453b 1155 Gene3D G3DSA:3.40.50.300 486 997 7.6E-233 T 14-10-2018 C3497_13055 97f5745afdbe28a41aed63fbdc38ac1a 148 Pfam PF03100 CcmE 4 129 1.3E-47 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 C3497_13055 97f5745afdbe28a41aed63fbdc38ac1a 148 Gene3D G3DSA:2.40.50.140 29 136 3.7E-39 T 14-10-2018 C3497_13055 97f5745afdbe28a41aed63fbdc38ac1a 148 SUPERFAMILY SSF82093 29 135 7.32E-38 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 C3497_13055 97f5745afdbe28a41aed63fbdc38ac1a 148 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 140 32.081 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 C3497_00820 fa9f45bcb213c1b21dfd1d203aa04260 256 SUPERFAMILY SSF47240 10 250 7.91E-84 T 14-10-2018 IPR009078 Ferritin-like superfamily C3497_00820 fa9f45bcb213c1b21dfd1d203aa04260 256 Pfam PF05138 Phenylacetic acid catabolic protein 5 256 1.3E-100 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 C3497_00820 fa9f45bcb213c1b21dfd1d203aa04260 256 PIRSF PIRSF037834 1 256 5.6E-105 T 14-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 C3497_00820 fa9f45bcb213c1b21dfd1d203aa04260 256 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 18 256 1.1E-101 T 14-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 C3497_00820 fa9f45bcb213c1b21dfd1d203aa04260 256 Gene3D G3DSA:1.20.1260.10 2 256 5.1E-102 T 14-10-2018 IPR012347 Ferritin-like C3497_02090 9894d18dcc3d86da6330cbab452d71e4 284 Pfam PF14489 QueF-like protein 197 270 3.7E-23 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C3497_02090 9894d18dcc3d86da6330cbab452d71e4 284 SUPERFAMILY SSF55620 188 268 1.04E-7 T 14-10-2018 C3497_02090 9894d18dcc3d86da6330cbab452d71e4 284 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 284 143.921 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C3497_02090 9894d18dcc3d86da6330cbab452d71e4 284 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 23 132 9.6E-47 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C3497_02090 9894d18dcc3d86da6330cbab452d71e4 284 TIGRFAM TIGR03138 QueF: queuine synthase 13 284 2.2E-120 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C3497_02090 9894d18dcc3d86da6330cbab452d71e4 284 Gene3D G3DSA:3.30.1130.10 147 284 1.1E-54 T 14-10-2018 C3497_02090 9894d18dcc3d86da6330cbab452d71e4 284 PIRSF PIRSF004750 9 284 4.0E-119 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C3497_02090 9894d18dcc3d86da6330cbab452d71e4 284 Gene3D G3DSA:3.30.1130.10 23 141 7.3E-44 T 14-10-2018 C3497_07345 07f76464a7278513c2129d6b0978df84 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 8 136 1.0E-45 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3497_07345 07f76464a7278513c2129d6b0978df84 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 150 238 1.5E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3497_07345 07f76464a7278513c2129d6b0978df84 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 8 391 47.54 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3497_07345 07f76464a7278513c2129d6b0978df84 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 393 1.7E-157 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3497_07345 07f76464a7278513c2129d6b0978df84 396 SUPERFAMILY SSF51735 6 154 6.04E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_07345 07f76464a7278513c2129d6b0978df84 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 270 386 8.2E-41 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3497_07345 07f76464a7278513c2129d6b0978df84 396 SUPERFAMILY SSF69055 301 394 2.35E-29 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3497_07345 07f76464a7278513c2129d6b0978df84 396 Gene3D G3DSA:1.10.1740.10 311 395 3.2E-27 T 14-10-2018 C3497_07345 07f76464a7278513c2129d6b0978df84 396 SUPERFAMILY SSF55347 130 273 3.92E-61 T 14-10-2018 C3497_07345 07f76464a7278513c2129d6b0978df84 396 PIRSF PIRSF006205 5 396 6.1E-153 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3497_07345 07f76464a7278513c2129d6b0978df84 396 Gene3D G3DSA:3.40.50.720 1 154 6.9E-53 T 14-10-2018 C3497_04495 5bdcf303076b983a4b2b2673f4932577 488 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 52 77 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 C3497_04495 5bdcf303076b983a4b2b2673f4932577 488 SUPERFAMILY SSF56762 16 462 7.85E-122 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04495 5bdcf303076b983a4b2b2673f4932577 488 Pfam PF00374 Nickel-dependent hydrogenase 52 129 3.1E-18 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C3497_04495 5bdcf303076b983a4b2b2673f4932577 488 Pfam PF00374 Nickel-dependent hydrogenase 273 462 2.1E-12 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C3497_04495 5bdcf303076b983a4b2b2673f4932577 488 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 453 462 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 C3497_04495 5bdcf303076b983a4b2b2673f4932577 488 Gene3D G3DSA:1.10.645.10 14 462 1.5E-94 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 PIRSF PIRSF500134 1 443 2.7E-195 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 2.7E-67 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 SUPERFAMILY SSF51735 1 195 5.44E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 424 2.4E-29 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 SMART SM00984 322 426 1.7E-50 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 PIRSF PIRSF000124 1 441 9.5E-156 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 Gene3D G3DSA:3.40.50.720 235 443 1.2E-77 T 14-10-2018 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 Gene3D G3DSA:3.40.50.720 1 202 7.0E-83 T 14-10-2018 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 Gene3D G3DSA:1.20.5.100 203 234 6.5E-18 T 14-10-2018 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 SUPERFAMILY SSF52413 316 436 6.15E-38 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 422 7.1E-142 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 SUPERFAMILY SSF48179 204 301 4.76E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_12840 d45b3be743ac52bde9f68f08f3c61203 443 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 2.5E-39 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_08045 de2347aa0e3d072befac6c7d72874f85 258 Gene3D G3DSA:3.90.226.10 8 209 2.0E-66 T 14-10-2018 C3497_08045 de2347aa0e3d072befac6c7d72874f85 258 SUPERFAMILY SSF52096 10 254 5.91E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_08045 de2347aa0e3d072befac6c7d72874f85 258 Gene3D G3DSA:1.10.12.10 210 256 2.2E-12 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal C3497_08045 de2347aa0e3d072befac6c7d72874f85 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 254 1.8E-61 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3497_12735 a54102ea859c0331a2efec6009f174eb 234 Gene3D G3DSA:3.40.109.10 6 201 1.7E-48 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3497_12735 a54102ea859c0331a2efec6009f174eb 234 SUPERFAMILY SSF55469 27 226 3.93E-51 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3497_12735 a54102ea859c0331a2efec6009f174eb 234 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 19 219 1.1E-81 T 14-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 C3497_12735 a54102ea859c0331a2efec6009f174eb 234 Pfam PF00881 Nitroreductase family 31 195 7.3E-32 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 C3497_11795 eed0c0182ca531d0d453a9b83d134677 253 Pfam PF01713 Smr domain 164 245 3.5E-22 T 14-10-2018 IPR002625 Smr domain C3497_11795 eed0c0182ca531d0d453a9b83d134677 253 SMART SM00463 161 245 7.4E-9 T 14-10-2018 IPR002625 Smr domain C3497_11795 eed0c0182ca531d0d453a9b83d134677 253 SUPERFAMILY SSF160443 162 245 1.96E-16 T 14-10-2018 IPR036063 Smr domain superfamily C3497_11795 eed0c0182ca531d0d453a9b83d134677 253 Gene3D G3DSA:3.30.1370.110 120 248 9.2E-40 T 14-10-2018 C3497_04250 d73c6c247b31643c04f5502aecaa047f 157 SUPERFAMILY SSF75471 3 93 2.62E-26 T 14-10-2018 IPR035920 YhbY-like superfamily C3497_04250 d73c6c247b31643c04f5502aecaa047f 157 SMART SM01103 4 87 1.0E-38 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 C3497_04250 d73c6c247b31643c04f5502aecaa047f 157 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 83 1.0E-19 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 C3497_04250 d73c6c247b31643c04f5502aecaa047f 157 Gene3D G3DSA:3.30.110.60 2 105 2.4E-30 T 14-10-2018 IPR035920 YhbY-like superfamily C3497_04250 d73c6c247b31643c04f5502aecaa047f 157 Pfam PF01985 CRS1 / YhbY (CRM) domain 4 87 6.7E-18 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 5.7E-83 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 SUPERFAMILY SSF52440 1 113 6.91E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.8E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 Gene3D G3DSA:3.40.50.20 1 85 4.9E-34 T 14-10-2018 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 Gene3D G3DSA:3.30.470.20 87 433 3.2E-154 T 14-10-2018 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 9.3E-40 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 SUPERFAMILY SSF51246 331 443 6.8E-44 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 SMART SM00878 336 441 5.2E-68 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 Gene3D G3DSA:3.30.1490.20 131 203 3.2E-154 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 4.0E-229 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 C3497_12265 7c0fb78cb7c52363e2924998b51d52d5 453 SUPERFAMILY SSF56059 83 348 1.94E-72 T 14-10-2018 C3497_13970 0b955be7455c2dac1c7868372dc86ac1 339 SUPERFAMILY SSF56194 212 339 6.28E-46 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_13970 0b955be7455c2dac1c7868372dc86ac1 339 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 13 338 2.0E-66 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_13970 0b955be7455c2dac1c7868372dc86ac1 339 Gene3D G3DSA:3.30.465.10 75 228 3.1E-55 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3497_13970 0b955be7455c2dac1c7868372dc86ac1 339 Gene3D G3DSA:3.30.43.10 3 72 2.0E-14 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 C3497_13970 0b955be7455c2dac1c7868372dc86ac1 339 Gene3D G3DSA:3.90.78.10 229 339 1.1E-41 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_13970 0b955be7455c2dac1c7868372dc86ac1 339 SUPERFAMILY SSF56176 11 197 3.43E-38 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3497_13970 0b955be7455c2dac1c7868372dc86ac1 339 Pfam PF01565 FAD binding domain 47 156 6.7E-21 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C3497_13970 0b955be7455c2dac1c7868372dc86ac1 339 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 215 339 1.2E-33 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_13970 0b955be7455c2dac1c7868372dc86ac1 339 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 339 81.025 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_11100 328b3837b8db737f06d1be90ec43a47c 940 SMART SM00487 87 311 3.6E-23 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_11100 328b3837b8db737f06d1be90ec43a47c 940 Pfam PF00271 Helicase conserved C-terminal domain 463 574 1.3E-21 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_11100 328b3837b8db737f06d1be90ec43a47c 940 Gene3D G3DSA:3.40.50.300 420 605 2.4E-47 T 14-10-2018 C3497_11100 328b3837b8db737f06d1be90ec43a47c 940 SUPERFAMILY SSF52540 232 611 4.32E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11100 328b3837b8db737f06d1be90ec43a47c 940 Gene3D G3DSA:3.40.50.10810 88 389 1.0E-69 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily C3497_11100 328b3837b8db737f06d1be90ec43a47c 940 SUPERFAMILY SSF52540 78 311 8.82E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11100 328b3837b8db737f06d1be90ec43a47c 940 Pfam PF00176 SNF2 family N-terminal domain 111 309 1.1E-14 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 C3497_11100 328b3837b8db737f06d1be90ec43a47c 940 SMART SM00490 494 574 1.9E-24 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_03610 6f5a317ce51124125d0ad12e581509fd 427 Pfam PF01551 Peptidase family M23 326 420 1.8E-25 T 14-10-2018 IPR016047 Peptidase M23 C3497_03610 6f5a317ce51124125d0ad12e581509fd 427 Gene3D G3DSA:2.70.70.10 291 425 6.8E-33 T 14-10-2018 IPR011055 Duplicated hybrid motif C3497_03610 6f5a317ce51124125d0ad12e581509fd 427 SUPERFAMILY SSF51261 230 423 5.75E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif C3497_11070 e647a2d2d4546517340f0299293d63f1 177 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 73 177 5.7E-45 T 14-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 C3497_11070 e647a2d2d4546517340f0299293d63f1 177 Pfam PF11072 Protein of unknown function (DUF2859) 30 175 6.3E-58 T 14-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 C3497_01755 5c585d5dee9ff032de19fe9c7ddcaacf 253 SUPERFAMILY SSF53335 96 220 5.08E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_01755 5c585d5dee9ff032de19fe9c7ddcaacf 253 Gene3D G3DSA:3.40.50.150 93 245 2.6E-27 T 14-10-2018 C3497_01755 5c585d5dee9ff032de19fe9c7ddcaacf 253 Pfam PF13847 Methyltransferase domain 120 218 1.3E-6 T 14-10-2018 IPR025714 Methyltransferase domain C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 Gene3D G3DSA:1.10.275.10 1 139 1.1E-56 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 Pfam PF00206 Lyase 13 342 1.6E-95 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 5.7E-29 T 14-10-2018 IPR000362 Fumarate lyase family C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 5.7E-29 T 14-10-2018 IPR000362 Fumarate lyase family C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 5.7E-29 T 14-10-2018 IPR000362 Fumarate lyase family C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 5.7E-29 T 14-10-2018 IPR000362 Fumarate lyase family C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 Gene3D G3DSA:1.20.200.10 140 407 8.6E-111 T 14-10-2018 C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 Pfam PF10415 Fumarase C C-terminus 408 460 3.5E-19 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 Gene3D G3DSA:1.10.40.30 408 459 7.6E-18 T 14-10-2018 C3497_05315 4bf35e5f2aa0663fb01e5757a7006a35 466 SUPERFAMILY SSF48557 3 459 1.1E-148 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 C3497_14495 72449d4904ee911e54dd5753b51ddc09 232 Pfam PF01292 Prokaryotic cytochrome b561 8 178 2.2E-19 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 C3497_14495 72449d4904ee911e54dd5753b51ddc09 232 Gene3D G3DSA:1.20.950.20 2 165 1.7E-15 T 14-10-2018 C3497_14495 72449d4904ee911e54dd5753b51ddc09 232 SUPERFAMILY SSF81342 3 188 8.5E-36 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C3497_02790 949a68db78b9db51ee423878554c2c0b 433 Pfam PF03129 Anticodon binding domain 330 418 6.2E-10 T 14-10-2018 IPR004154 Anticodon-binding C3497_02790 949a68db78b9db51ee423878554c2c0b 433 Gene3D G3DSA:3.30.930.10 2 321 3.4E-119 T 14-10-2018 C3497_02790 949a68db78b9db51ee423878554c2c0b 433 PIRSF PIRSF001549 1 420 4.1E-109 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 C3497_02790 949a68db78b9db51ee423878554c2c0b 433 SUPERFAMILY SSF52954 329 421 1.1E-19 T 14-10-2018 C3497_02790 949a68db78b9db51ee423878554c2c0b 433 Pfam PF13393 Histidyl-tRNA synthetase 10 313 6.6E-48 T 14-10-2018 C3497_02790 949a68db78b9db51ee423878554c2c0b 433 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 32.193 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 C3497_02790 949a68db78b9db51ee423878554c2c0b 433 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 408 1.5E-151 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 C3497_02790 949a68db78b9db51ee423878554c2c0b 433 Gene3D G3DSA:3.40.50.800 325 418 5.1E-22 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily C3497_02790 949a68db78b9db51ee423878554c2c0b 433 SUPERFAMILY SSF55681 6 319 1.17E-102 T 14-10-2018 C3497_04200 c47a1782c83f424425b37cac3ea4d51e 295 Gene3D G3DSA:2.60.200.30 130 265 1.4E-90 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 C3497_04200 c47a1782c83f424425b37cac3ea4d51e 295 Gene3D G3DSA:3.40.50.10330 24 288 1.4E-90 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 C3497_04200 c47a1782c83f424425b37cac3ea4d51e 295 SUPERFAMILY SSF111331 7 289 4.45E-88 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily C3497_04200 c47a1782c83f424425b37cac3ea4d51e 295 Hamap MF_00361 NAD kinase [nadK]. 6 288 34.013 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 C3497_04200 c47a1782c83f424425b37cac3ea4d51e 295 Pfam PF01513 ATP-NAD kinase 58 270 3.2E-58 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 C3497_13610 11b25d4c1304575f43b81722dcc7c31a 166 SMART SM00986 8 164 8.1E-10 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3497_13610 11b25d4c1304575f43b81722dcc7c31a 166 Pfam PF03167 Uracil DNA glycosylase superfamily 11 163 1.1E-9 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3497_13610 11b25d4c1304575f43b81722dcc7c31a 166 SUPERFAMILY SSF52141 7 164 9.94E-36 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3497_13610 11b25d4c1304575f43b81722dcc7c31a 166 SMART SM00987 8 164 8.1E-10 T 14-10-2018 C3497_13610 11b25d4c1304575f43b81722dcc7c31a 166 Gene3D G3DSA:3.40.470.10 3 166 8.7E-49 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3497_13610 11b25d4c1304575f43b81722dcc7c31a 166 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 6 160 2.6E-44 T 14-10-2018 IPR026353 Hypoxanthine-DNA glycosylase C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 Gene3D G3DSA:3.65.10.10 20 224 2.8E-69 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 423 1.0E-134 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 TIGRFAM TIGR00017 cmk: cytidylate kinase 432 641 3.1E-69 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 Gene3D G3DSA:3.65.10.10 230 428 1.0E-70 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 Pfam PF02224 Cytidylate kinase 434 642 1.0E-69 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 427 8.3E-139 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 ProSitePatterns PS00885 EPSP synthase signature 2. 342 360 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 Hamap MF_00238 Cytidylate kinase [cmk]. 432 646 32.977 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 SUPERFAMILY SSF55205 1 426 3.27E-129 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 SUPERFAMILY SSF52540 433 642 1.31E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 Gene3D G3DSA:3.40.50.300 429 649 2.2E-76 T 14-10-2018 C3497_09560 3fda620be27c8df532e9aaa0dce33a56 650 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 430 34.232 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 Pfam PF00989 PAS fold 70 179 6.3E-17 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 SUPERFAMILY SSF55785 57 180 1.92E-28 T 14-10-2018 IPR035965 PAS domain superfamily C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 SUPERFAMILY SSF55874 280 432 5.76E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 SUPERFAMILY SSF47384 199 279 5.89E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 432 2.9E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 5.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 5.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 375 5.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 389 5.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 SMART SM00387 322 434 2.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 Gene3D G3DSA:1.10.287.130 179 279 4.1E-19 T 14-10-2018 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 Gene3D G3DSA:3.30.450.20 54 178 3.3E-29 T 14-10-2018 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 65 186 2.3E-24 T 14-10-2018 IPR000014 PAS domain C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 SMART SM00086 142 182 2.3E-7 T 14-10-2018 IPR001610 PAC motif C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 SMART SM00388 213 281 1.6E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 278 2.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 Gene3D G3DSA:3.30.565.10 283 432 3.4E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_05795 4d65b873fb9350e1f863cb2e9cd5f5ee 438 SMART SM00091 69 135 8.8E-11 T 14-10-2018 IPR000014 PAS domain C3497_09900 871140d36c5c288cf4cff1f455218f29 257 SUPERFAMILY SSF53098 182 247 2.43E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_09900 871140d36c5c288cf4cff1f455218f29 257 Gene3D G3DSA:3.30.420.10 180 255 7.3E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_09900 871140d36c5c288cf4cff1f455218f29 257 Pfam PF13384 Homeodomain-like domain 28 76 1.2E-6 T 14-10-2018 C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 489 627 3.7E-39 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 SUPERFAMILY SSF54631 165 284 7.33E-24 T 14-10-2018 C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 Pfam PF00027 Cyclic nucleotide-binding domain 45 125 3.4E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 313 451 1.2E-45 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 SUPERFAMILY SSF51206 15 150 8.12E-18 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 Gene3D G3DSA:2.60.120.10 13 152 1.2E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 Pfam PF00571 CBS domain 232 285 5.1E-7 T 14-10-2018 IPR000644 CBS domain C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 Gene3D G3DSA:3.10.580.10 153 229 4.2E-9 T 14-10-2018 C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 Gene3D G3DSA:3.10.580.10 230 351 4.9E-12 T 14-10-2018 C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 SMART SM00116 174 222 0.28 T 14-10-2018 IPR000644 CBS domain C3497_04920 a4aa2025e5606338eb3be41b3da258ee 629 SMART SM00116 239 287 0.08 T 14-10-2018 IPR000644 CBS domain C3497_10130 e810b34b49df93f9f38ad96552c4774a 153 Gene3D G3DSA:3.30.700.10 10 153 2.5E-17 T 14-10-2018 C3497_10130 e810b34b49df93f9f38ad96552c4774a 153 SUPERFAMILY SSF54523 10 126 7.38E-16 T 14-10-2018 C3497_10130 e810b34b49df93f9f38ad96552c4774a 153 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 4.4E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10130 e810b34b49df93f9f38ad96552c4774a 153 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 2.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10130 e810b34b49df93f9f38ad96552c4774a 153 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_07990 89b4b82bdc1ad579e61b43735d27a5c3 133 Gene3D G3DSA:2.30.30.790 2 122 7.9E-17 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07990 89b4b82bdc1ad579e61b43735d27a5c3 133 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 6.7E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07990 89b4b82bdc1ad579e61b43735d27a5c3 133 PIRSF PIRSF002191 1 133 3.9E-53 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07990 89b4b82bdc1ad579e61b43735d27a5c3 133 SUPERFAMILY SSF50104 1 122 7.12E-46 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C3497_07990 89b4b82bdc1ad579e61b43735d27a5c3 133 Pfam PF01245 Ribosomal protein L19 2 117 6.6E-48 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07990 89b4b82bdc1ad579e61b43735d27a5c3 133 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 118 30.785 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07990 89b4b82bdc1ad579e61b43735d27a5c3 133 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.0E-34 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07990 89b4b82bdc1ad579e61b43735d27a5c3 133 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.0E-34 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07990 89b4b82bdc1ad579e61b43735d27a5c3 133 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.0E-34 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07990 89b4b82bdc1ad579e61b43735d27a5c3 133 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_09580 aaf77a4b3f05308869c510cfc1ad9329 365 SUPERFAMILY SSF53383 1 362 8.62E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_09580 aaf77a4b3f05308869c510cfc1ad9329 365 PIRSF PIRSF000525 1 365 4.2E-151 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 C3497_09580 aaf77a4b3f05308869c510cfc1ad9329 365 Gene3D G3DSA:3.40.640.10 17 261 1.2E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_09580 aaf77a4b3f05308869c510cfc1ad9329 365 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 364 3.8E-155 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 C3497_09580 aaf77a4b3f05308869c510cfc1ad9329 365 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 364 50.511 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 C3497_09580 aaf77a4b3f05308869c510cfc1ad9329 365 Gene3D G3DSA:3.90.1150.10 262 365 2.5E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_09580 aaf77a4b3f05308869c510cfc1ad9329 365 Pfam PF00266 Aminotransferase class-V 4 353 1.1E-51 T 14-10-2018 IPR000192 Aminotransferase class V domain C3497_09580 aaf77a4b3f05308869c510cfc1ad9329 365 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site C3497_01810 b36c65027b4006f8946778511d2687dd 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.68 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 C3497_01810 b36c65027b4006f8946778511d2687dd 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 7.9E-106 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 C3497_01810 b36c65027b4006f8946778511d2687dd 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 4.0E-52 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein C3497_01810 b36c65027b4006f8946778511d2687dd 232 PIRSF PIRSF002155 1 227 4.5E-78 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01810 b36c65027b4006f8946778511d2687dd 232 Gene3D G3DSA:3.40.50.790 68 159 9.0E-81 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich C3497_01810 b36c65027b4006f8946778511d2687dd 232 Gene3D G3DSA:3.30.190.20 21 224 9.0E-81 T 14-10-2018 C3497_01810 b36c65027b4006f8946778511d2687dd 232 SUPERFAMILY SSF56808 6 225 5.62E-82 T 14-10-2018 IPR023674 Ribosomal protein L1-like C3497_01810 b36c65027b4006f8946778511d2687dd 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_07965 9e05387825b1916aa1b18aaa190dbd7f 406 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 2 296 22.319 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial C3497_07965 9e05387825b1916aa1b18aaa190dbd7f 406 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 11 267 2.8E-67 T 14-10-2018 IPR017039 Virulence factor BrkB C3497_07965 9e05387825b1916aa1b18aaa190dbd7f 406 Pfam PF03631 Virulence factor BrkB 20 265 1.2E-54 T 14-10-2018 IPR017039 Virulence factor BrkB C3497_05990 6ff833ead65dd8ffe1874cd61bf4e31a 357 ProSitePatterns PS01054 Transaldolase signature 1. 39 47 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 C3497_05990 6ff833ead65dd8ffe1874cd61bf4e31a 357 SUPERFAMILY SSF51569 1 355 6.11E-69 T 14-10-2018 C3497_05990 6ff833ead65dd8ffe1874cd61bf4e31a 357 ProSitePatterns PS00958 Transaldolase active site. 135 152 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 C3497_05990 6ff833ead65dd8ffe1874cd61bf4e31a 357 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 354 7.0E-76 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 C3497_05990 6ff833ead65dd8ffe1874cd61bf4e31a 357 Hamap MF_00493 Transaldolase [tal]. 1 357 125.93 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 C3497_05990 6ff833ead65dd8ffe1874cd61bf4e31a 357 Gene3D G3DSA:3.20.20.70 2 356 1.8E-141 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_05990 6ff833ead65dd8ffe1874cd61bf4e31a 357 TIGRFAM TIGR00876 tal_mycobact: transaldolase 13 353 1.7E-91 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 C3497_05990 6ff833ead65dd8ffe1874cd61bf4e31a 357 PIRSF PIRSF036915 1 357 9.9E-138 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:3.40.50.300 10 588 2.0E-217 T 14-10-2018 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 SUPERFAMILY SSF52540 9 563 4.95E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:3.30.190.20 1096 1220 9.3E-24 T 14-10-2018 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:3.40.50.300 964 1081 7.4E-25 T 14-10-2018 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 SUPERFAMILY SSF52540 610 916 9.67E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 SMART SM00382 626 912 0.017 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 SMART SM00382 994 1439 10.0 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 SMART SM00382 1507 1812 0.62 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 8 929 4.6E-289 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:1.20.1580.10 1580 1718 4.2E-132 T 14-10-2018 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:1.20.1580.10 685 823 6.6E-131 T 14-10-2018 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:3.40.50.300 1491 1840 4.2E-132 T 14-10-2018 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 SUPERFAMILY SSF52540 1493 1814 1.33E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 ProSitePatterns PS00211 ABC transporters family signature. 1362 1376 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:3.40.50.300 610 942 6.6E-131 T 14-10-2018 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:1.20.1580.10 94 486 2.0E-217 T 14-10-2018 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 ProSitePatterns PS00211 ABC transporters family signature. 1718 1732 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:3.30.190.20 134 236 2.0E-217 T 14-10-2018 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:3.40.50.300 1244 1471 5.1E-60 T 14-10-2018 C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 SUPERFAMILY SSF52540 977 1444 3.92E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14490 c70a807e83f5c1ce92b82520910457e5 1855 Gene3D G3DSA:1.10.8.280 279 387 2.0E-217 T 14-10-2018 C3497_11395 25ab5b026debcc4ca679252de95112f5 248 SUPERFAMILY SSF51366 1 238 1.1E-75 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3497_11395 25ab5b026debcc4ca679252de95112f5 248 Pfam PF00977 Histidine biosynthesis protein 3 232 3.7E-80 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 C3497_11395 25ab5b026debcc4ca679252de95112f5 248 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 1.1E-78 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 C3497_11395 25ab5b026debcc4ca679252de95112f5 248 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.035 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 C3497_11395 25ab5b026debcc4ca679252de95112f5 248 Gene3D G3DSA:3.20.20.70 1 242 2.9E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_10595 d63a56349212f895a192c50d206c7d14 736 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 313 462 9.8E-15 T 14-10-2018 IPR000160 GGDEF domain C3497_10595 d63a56349212f895a192c50d206c7d14 736 Pfam PF11849 Domain of unknown function (DUF3369) 146 312 1.6E-41 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 C3497_10595 d63a56349212f895a192c50d206c7d14 736 Pfam PF00563 EAL domain 482 717 7.9E-69 T 14-10-2018 IPR001633 EAL domain C3497_10595 d63a56349212f895a192c50d206c7d14 736 Gene3D G3DSA:3.30.70.270 309 470 3.0E-27 T 14-10-2018 C3497_10595 d63a56349212f895a192c50d206c7d14 736 SUPERFAMILY SSF52172 20 155 1.29E-12 T 14-10-2018 IPR011006 CheY-like superfamily C3497_10595 d63a56349212f895a192c50d206c7d14 736 Pfam PF00072 Response regulator receiver domain 26 144 1.9E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_10595 d63a56349212f895a192c50d206c7d14 736 Gene3D G3DSA:3.40.50.2300 23 161 3.0E-13 T 14-10-2018 C3497_10595 d63a56349212f895a192c50d206c7d14 736 SUPERFAMILY SSF141868 482 728 4.32E-82 T 14-10-2018 IPR035919 EAL domain superfamily C3497_10595 d63a56349212f895a192c50d206c7d14 736 SMART SM00267 305 466 7.4E-18 T 14-10-2018 IPR000160 GGDEF domain C3497_10595 d63a56349212f895a192c50d206c7d14 736 SUPERFAMILY SSF55073 323 465 9.42E-25 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_10595 d63a56349212f895a192c50d206c7d14 736 SMART SM00052 476 722 1.2E-98 T 14-10-2018 IPR001633 EAL domain C3497_10595 d63a56349212f895a192c50d206c7d14 736 Pfam PF00990 Diguanylate cyclase, GGDEF domain 317 460 9.1E-18 T 14-10-2018 IPR000160 GGDEF domain C3497_10595 d63a56349212f895a192c50d206c7d14 736 Gene3D G3DSA:3.20.20.450 477 735 1.6E-91 T 14-10-2018 IPR035919 EAL domain superfamily C3497_04790 1ff963b74e93afc132e89934f9e8ec6d 506 Gene3D G3DSA:3.30.465.40 39 258 1.1E-61 T 14-10-2018 C3497_04790 1ff963b74e93afc132e89934f9e8ec6d 506 Pfam PF01565 FAD binding domain 63 201 9.4E-38 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C3497_04790 1ff963b74e93afc132e89934f9e8ec6d 506 SUPERFAMILY SSF55103 211 481 6.54E-74 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C3497_04790 1ff963b74e93afc132e89934f9e8ec6d 506 Gene3D G3DSA:3.30.70.2740 358 438 7.8E-8 T 14-10-2018 C3497_04790 1ff963b74e93afc132e89934f9e8ec6d 506 Gene3D G3DSA:1.10.45.10 439 479 2.6E-6 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 C3497_04790 1ff963b74e93afc132e89934f9e8ec6d 506 Pfam PF02913 FAD linked oxidases, C-terminal domain 242 477 2.8E-63 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C3497_04790 1ff963b74e93afc132e89934f9e8ec6d 506 SUPERFAMILY SSF56176 28 238 1.45E-68 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 Gene3D G3DSA:3.40.190.10 116 215 8.4E-80 T 14-10-2018 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 SUPERFAMILY SSF53850 18 232 7.44E-81 T 14-10-2018 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 19 310 3.9E-103 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 Gene3D G3DSA:3.30.160.40 235 319 2.6E-27 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 18 310 37.581 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 SUPERFAMILY SSF54782 233 318 1.03E-24 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 PRINTS PR00151 Porphobilinogen deaminase signature 156 173 3.3E-44 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 PRINTS PR00151 Porphobilinogen deaminase signature 89 108 3.3E-44 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 PRINTS PR00151 Porphobilinogen deaminase signature 137 154 3.3E-44 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 PRINTS PR00151 Porphobilinogen deaminase signature 58 78 3.3E-44 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 PRINTS PR00151 Porphobilinogen deaminase signature 243 260 3.3E-44 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 PIRSF PIRSF001438 2 320 2.2E-115 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 239 308 7.3E-17 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 19 225 4.0E-74 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 244 260 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11945 e49832ac8426f9d271c8ae368eaf316d 320 Gene3D G3DSA:3.40.190.10 19 220 8.4E-80 T 14-10-2018 C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 SUPERFAMILY SSF51735 1 158 3.94E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 Gene3D G3DSA:3.40.50.720 4 340 2.1E-172 T 14-10-2018 C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 PIRSF PIRSF000098 1 435 4.5E-166 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 SUPERFAMILY SSF55347 137 302 9.15E-53 T 14-10-2018 C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 SUPERFAMILY SSF55021 353 423 7.13E-14 T 14-10-2018 C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 Pfam PF00742 Homoserine dehydrogenase 137 315 1.3E-64 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 5.4E-23 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 Gene3D G3DSA:3.30.70.260 349 423 2.1E-172 T 14-10-2018 C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 Gene3D G3DSA:3.30.360.10 136 348 2.1E-172 T 14-10-2018 C3497_04945 890fb7ba278326b5cabad10da9fb785b 436 Pfam PF01842 ACT domain 354 421 1.4E-14 T 14-10-2018 IPR002912 ACT domain C3497_10275 889ca602e8a907ec1122e5f22c8e7843 572 Gene3D G3DSA:3.30.300.160 67 146 3.4E-8 T 14-10-2018 C3497_10275 889ca602e8a907ec1122e5f22c8e7843 572 Pfam PF00437 Type II/IV secretion system protein 196 462 1.9E-89 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_10275 889ca602e8a907ec1122e5f22c8e7843 572 SMART SM00382 323 458 0.0055 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10275 889ca602e8a907ec1122e5f22c8e7843 572 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 12 571 2.4E-250 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 C3497_10275 889ca602e8a907ec1122e5f22c8e7843 572 Gene3D G3DSA:3.30.450.90 160 295 4.8E-48 T 14-10-2018 C3497_10275 889ca602e8a907ec1122e5f22c8e7843 572 Gene3D G3DSA:3.40.50.300 298 572 3.8E-105 T 14-10-2018 C3497_10275 889ca602e8a907ec1122e5f22c8e7843 572 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 390 404 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_10275 889ca602e8a907ec1122e5f22c8e7843 572 SUPERFAMILY SSF160246 7 145 8.11E-29 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C3497_10275 889ca602e8a907ec1122e5f22c8e7843 572 SUPERFAMILY SSF52540 174 568 3.86E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10275 889ca602e8a907ec1122e5f22c8e7843 572 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 149 7.7E-20 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal C3497_13775 9bfd1b813964c0ce606c526e3bb07a62 192 Gene3D G3DSA:1.20.5.810 12 64 5.6E-26 T 14-10-2018 C3497_13775 9bfd1b813964c0ce606c526e3bb07a62 192 Gene3D G3DSA:1.20.1290.10 65 188 1.7E-41 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C3497_13775 9bfd1b813964c0ce606c526e3bb07a62 192 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 124 4.6E-14 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C3497_13775 9bfd1b813964c0ce606c526e3bb07a62 192 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 64 111 6.2E-12 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C3497_13775 9bfd1b813964c0ce606c526e3bb07a62 192 SUPERFAMILY SSF69118 3 190 3.4E-57 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C3497_13775 9bfd1b813964c0ce606c526e3bb07a62 192 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 6 182 3.0E-66 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related C3497_12070 3079752146b4b2347915b7c22bd160f6 331 Gene3D G3DSA:3.10.350.10 114 173 2.6E-10 T 14-10-2018 IPR036779 LysM domain superfamily C3497_12070 3079752146b4b2347915b7c22bd160f6 331 SUPERFAMILY SSF48452 74 312 9.93E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_12070 3079752146b4b2347915b7c22bd160f6 331 Pfam PF07719 Tetratricopeptide repeat 280 309 2.5E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 C3497_12070 3079752146b4b2347915b7c22bd160f6 331 SMART SM00257 119 166 9.0E-9 T 14-10-2018 IPR018392 LysM domain C3497_12070 3079752146b4b2347915b7c22bd160f6 331 SMART SM00028 229 262 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_12070 3079752146b4b2347915b7c22bd160f6 331 SMART SM00028 277 310 0.004 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_12070 3079752146b4b2347915b7c22bd160f6 331 Pfam PF01476 LysM domain 120 166 8.4E-10 T 14-10-2018 IPR018392 LysM domain C3497_12070 3079752146b4b2347915b7c22bd160f6 331 SUPERFAMILY SSF54106 119 167 1.03E-6 T 14-10-2018 C3497_12070 3079752146b4b2347915b7c22bd160f6 331 Gene3D G3DSA:1.25.40.10 221 329 1.1E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 Pfam PF04408 Helicase associated domain (HA2) 455 536 1.2E-16 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 SUPERFAMILY SSF52540 49 556 1.26E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 SMART SM00382 62 358 5.3E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 SMART SM00847 452 548 2.2E-33 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 Gene3D G3DSA:3.40.50.300 228 409 2.4E-55 T 14-10-2018 C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 SMART SM00487 45 234 1.4E-21 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1337 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 Gene3D G3DSA:1.20.120.1080 436 534 1.5E-18 T 14-10-2018 C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 Pfam PF00271 Helicase conserved C-terminal domain 273 391 9.2E-10 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 Pfam PF11898 Domain of unknown function (DUF3418) 724 1337 5.5E-195 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 Gene3D G3DSA:3.40.50.300 7 227 1.9E-72 T 14-10-2018 C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 629 710 3.6E-15 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 C3497_12615 e10fe5102dc71f84afd0aabd31b81d39 1341 SMART SM00490 291 392 8.1E-10 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_08335 39af4257f4e9024a310035db49400c00 345 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 333 50.211 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 C3497_08335 39af4257f4e9024a310035db49400c00 345 Pfam PF01180 Dihydroorotate dehydrogenase 44 328 7.1E-86 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 C3497_08335 39af4257f4e9024a310035db49400c00 345 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 C3497_08335 39af4257f4e9024a310035db49400c00 345 Gene3D G3DSA:3.20.20.70 2 332 7.3E-132 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_08335 39af4257f4e9024a310035db49400c00 345 PIRSF PIRSF000164 11 337 1.4E-92 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 C3497_08335 39af4257f4e9024a310035db49400c00 345 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 77 96 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 C3497_08335 39af4257f4e9024a310035db49400c00 345 SUPERFAMILY SSF51395 1 331 3.41E-101 T 14-10-2018 C3497_08335 39af4257f4e9024a310035db49400c00 345 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 332 4.6E-128 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 C3497_12065 076de39d616c5c78a3421895527454be 567 Pfam PF00672 HAMP domain 474 522 3.7E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_12065 076de39d616c5c78a3421895527454be 567 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 14 37 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 C3497_12065 076de39d616c5c78a3421895527454be 567 SUPERFAMILY SSF56112 4 269 1.04E-74 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3497_12065 076de39d616c5c78a3421895527454be 567 SMART SM00304 474 526 1.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_12065 076de39d616c5c78a3421895527454be 567 SMART SM00220 8 270 2.5E-60 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C3497_12065 076de39d616c5c78a3421895527454be 567 Gene3D G3DSA:1.20.1480.50 433 531 1.5E-9 T 14-10-2018 C3497_12065 076de39d616c5c78a3421895527454be 567 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 127 139 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 C3497_12065 076de39d616c5c78a3421895527454be 567 Gene3D G3DSA:3.30.200.20 1 87 9.4E-24 T 14-10-2018 C3497_12065 076de39d616c5c78a3421895527454be 567 SUPERFAMILY SSF158472 474 523 1.7E-8 T 14-10-2018 C3497_12065 076de39d616c5c78a3421895527454be 567 Pfam PF00069 Protein kinase domain 11 258 1.3E-47 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C3497_12065 076de39d616c5c78a3421895527454be 567 Gene3D G3DSA:1.10.510.10 88 288 2.0E-55 T 14-10-2018 C3497_04745 90cc1cef14bf8a4143d79ba1d263c88e 295 SUPERFAMILY SSF69572 8 268 1.11E-51 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 C3497_04745 90cc1cef14bf8a4143d79ba1d263c88e 295 Gene3D G3DSA:3.40.50.720 4 268 4.9E-45 T 14-10-2018 C3497_04745 90cc1cef14bf8a4143d79ba1d263c88e 295 Pfam PF00899 ThiF family 12 260 5.1E-43 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 C3497_06270 dd617b3a101aa9fca7f2ea1283b07146 96 Pfam PF12838 4Fe-4S dicluster domain 9 59 5.2E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_06270 dd617b3a101aa9fca7f2ea1283b07146 96 Gene3D G3DSA:3.30.70.20 2 73 2.6E-21 T 14-10-2018 C3497_06270 dd617b3a101aa9fca7f2ea1283b07146 96 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_06270 dd617b3a101aa9fca7f2ea1283b07146 96 SUPERFAMILY SSF54862 6 67 3.26E-14 T 14-10-2018 C3497_11285 a19f4df8b8b6c9f55d1720e182dca33d 274 Pfam PF05853 beta-keto acid cleavage enzyme 4 269 1.9E-67 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 C3497_11285 a19f4df8b8b6c9f55d1720e182dca33d 274 Gene3D G3DSA:3.20.20.70 1 272 4.1E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_13745 bb2ba271b5963676a2fd0547a882263c 388 Pfam PF00529 HlyD membrane-fusion protein of T1SS 50 363 9.2E-8 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_13745 bb2ba271b5963676a2fd0547a882263c 388 Gene3D G3DSA:2.40.420.20 307 376 3.1E-109 T 14-10-2018 C3497_13745 bb2ba271b5963676a2fd0547a882263c 388 Gene3D G3DSA:2.40.30.170 53 306 3.1E-109 T 14-10-2018 C3497_13745 bb2ba271b5963676a2fd0547a882263c 388 SUPERFAMILY SSF111369 55 303 7.85E-83 T 14-10-2018 C3497_13745 bb2ba271b5963676a2fd0547a882263c 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 378 3.0E-84 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_13745 bb2ba271b5963676a2fd0547a882263c 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 296 1.6E-11 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3497_13745 bb2ba271b5963676a2fd0547a882263c 388 Gene3D G3DSA:2.40.50.100 66 210 3.1E-109 T 14-10-2018 C3497_13745 bb2ba271b5963676a2fd0547a882263c 388 Gene3D G3DSA:1.10.287.470 101 174 3.1E-109 T 14-10-2018 C3497_06755 e333a209671a742dfea7c4b650cf77d6 416 Pfam PF07690 Major Facilitator Superfamily 9 338 8.5E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_06755 e333a209671a742dfea7c4b650cf77d6 416 SUPERFAMILY SSF103473 5 402 5.36E-25 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_06755 e333a209671a742dfea7c4b650cf77d6 416 Gene3D G3DSA:1.20.1250.20 4 397 7.3E-23 T 14-10-2018 C3497_04145 799d57a50fd67a9ea056b1e28af3ae91 401 Pfam PF03734 L,D-transpeptidase catalytic domain 141 274 1.4E-17 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 C3497_04145 799d57a50fd67a9ea056b1e28af3ae91 401 SUPERFAMILY SSF141523 135 274 7.32E-16 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like C3497_04145 799d57a50fd67a9ea056b1e28af3ae91 401 SUPERFAMILY SSF54427 289 397 7.48E-11 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3497_04145 799d57a50fd67a9ea056b1e28af3ae91 401 Gene3D G3DSA:3.10.450.50 286 399 2.4E-6 T 14-10-2018 C3497_04145 799d57a50fd67a9ea056b1e28af3ae91 401 Gene3D G3DSA:2.40.440.10 136 274 4.1E-14 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 SMART SM00292 604 681 6.3E-15 T 14-10-2018 IPR001357 BRCT domain C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 339 354 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Gene3D G3DSA:1.10.150.20 517 597 1.1E-32 T 14-10-2018 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 SUPERFAMILY SSF47781 418 594 2.19E-64 T 14-10-2018 IPR010994 RuvA domain 2-like C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 124 153 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 SMART SM00278 491 510 2.4 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 SMART SM00278 555 574 61.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 SMART SM00278 457 476 19.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 SMART SM00278 523 542 190.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 418 445 5.7E-12 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 15 674 6.4E-246 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Pfam PF12826 Helix-hairpin-helix motif 521 584 2.0E-26 T 14-10-2018 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Gene3D G3DSA:2.20.70.80 399 442 6.3E-12 T 14-10-2018 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 11 326 9.2E-112 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 SUPERFAMILY SSF50249 326 407 4.8E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 PIRSF PIRSF001604 1 682 3.3E-234 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Pfam PF14520 Helix-hairpin-helix domain 457 511 6.0E-8 T 14-10-2018 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 330 404 1.0E-34 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Hamap MF_01588 DNA ligase [ligA]. 6 678 54.28 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 606 677 2.8E-11 T 14-10-2018 IPR001357 BRCT domain C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Gene3D G3DSA:2.40.50.140 326 397 5.6E-34 T 14-10-2018 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 SUPERFAMILY SSF52113 603 681 4.51E-19 T 14-10-2018 IPR036420 BRCT domain superfamily C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 SMART SM00532 7 459 2.0E-238 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 SUPERFAMILY SSF56091 6 324 2.26E-110 T 14-10-2018 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Gene3D G3DSA:1.10.150.20 443 516 2.4E-31 T 14-10-2018 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Gene3D G3DSA:1.10.287.610 7 72 1.1E-26 T 14-10-2018 C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Gene3D G3DSA:3.40.50.10190 604 684 6.2E-25 T 14-10-2018 IPR036420 BRCT domain superfamily C3497_06795 d0c727e9accf38a0a37b3384f1eb1144 693 Gene3D G3DSA:3.30.470.90 73 325 1.3E-90 T 14-10-2018 C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 1.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 1.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 1.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 SUPERFAMILY SSF47384 247 320 5.1E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 Gene3D G3DSA:3.30.450.300 59 186 2.0E-43 T 14-10-2018 IPR038421 Sensor histidine kinase RisS, periplasmic domain superfamily C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 Gene3D G3DSA:3.30.565.10 324 472 8.1E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 73 181 1.6E-36 T 14-10-2018 IPR032408 Sensor histidine kinase RisS, periplasmic domain C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 SMART SM00304 210 262 3.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 SUPERFAMILY SSF55874 313 469 5.37E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 SMART SM00387 360 471 3.2E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 Pfam PF00672 HAMP domain 211 257 2.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 Gene3D G3DSA:1.10.287.130 207 317 2.5E-18 T 14-10-2018 C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 267 320 1.9E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 SMART SM00388 263 322 9.3E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_06725 ab33638c4ab80e8d5072578e88e405de 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 470 3.1E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_08055 ba33ce5ad25092974dd6ed9ceeba9049 477 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 474 31.572 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 C3497_08055 ba33ce5ad25092974dd6ed9ceeba9049 477 Gene3D G3DSA:1.25.40.10 242 471 5.2E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_08055 ba33ce5ad25092974dd6ed9ceeba9049 477 Pfam PF01435 Peptidase family M48 64 251 3.1E-33 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3497_08055 ba33ce5ad25092974dd6ed9ceeba9049 477 SUPERFAMILY SSF48452 301 446 2.22E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_08055 ba33ce5ad25092974dd6ed9ceeba9049 477 Gene3D G3DSA:3.30.2010.10 64 142 1.1E-5 T 14-10-2018 C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 TIGRFAM TIGR00038 efp: translation elongation factor P 3 184 3.9E-67 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 Gene3D G3DSA:2.40.50.140 127 185 1.7E-27 T 14-10-2018 C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 3.2E-20 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 Gene3D G3DSA:2.30.30.30 1 62 6.7E-20 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 2.4E-18 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 SUPERFAMILY SSF50249 128 184 2.23E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 SMART SM00841 128 183 5.6E-28 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 Gene3D G3DSA:2.40.50.140 64 125 3.9E-22 T 14-10-2018 C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 Pfam PF09285 Elongation factor P, C-terminal 128 183 3.8E-24 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 ProSitePatterns PS01275 Elongation factor P signature. 149 168 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 Hamap MF_00141 Elongation factor P [efp]. 1 184 48.779 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 PIRSF PIRSF005901 1 185 4.0E-59 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 SUPERFAMILY SSF50249 65 125 2.36E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 SMART SM01185 67 120 2.7E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 C3497_14480 9c7d4d06da553ea7b7f7a3d006de724b 185 SUPERFAMILY SSF50104 1 63 2.41E-17 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C3497_14425 3a228229cf04506b82de32c48e8bb609 830 SMART SM00387 41 201 9.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_14425 3a228229cf04506b82de32c48e8bb609 830 Pfam PF01751 Toprim domain 453 565 4.8E-19 T 14-10-2018 IPR006171 TOPRIM domain C3497_14425 3a228229cf04506b82de32c48e8bb609 830 Gene3D G3DSA:3.30.565.10 12 245 4.8E-90 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_14425 3a228229cf04506b82de32c48e8bb609 830 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 197 3.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_14425 3a228229cf04506b82de32c48e8bb609 830 Gene3D G3DSA:3.40.50.670 716 829 3.3E-25 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 SUPERFAMILY SSF54211 246 426 3.22E-55 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_14425 3a228229cf04506b82de32c48e8bb609 830 ProSitePatterns PS00177 DNA topoisomerase II signature. 456 464 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 206 221 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 408 428 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 799 815 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 221 234 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 276 294 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 394 408 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 783 795 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 245 267 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 346 362 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 15 25 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR01159 DNA gyrase subunit B signature 504 513 4.0E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 SUPERFAMILY SSF56719 428 821 9.68E-89 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 760 819 3.5E-29 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 SUPERFAMILY SSF55874 15 241 7.73E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_14425 3a228229cf04506b82de32c48e8bb609 830 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 830 97.92 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 Gene3D G3DSA:3.40.50.670 432 600 1.9E-75 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 830 5.8E-290 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 SMART SM00433 45 823 8.6E-263 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 Gene3D G3DSA:3.30.230.10 246 426 1.3E-69 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR00418 DNA topoisomerase II family signature 80 93 6.7E-69 T 14-10-2018 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR00418 DNA topoisomerase II family signature 302 315 6.7E-69 T 14-10-2018 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR00418 DNA topoisomerase II family signature 762 778 6.7E-69 T 14-10-2018 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR00418 DNA topoisomerase II family signature 45 60 6.7E-69 T 14-10-2018 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR00418 DNA topoisomerase II family signature 127 141 6.7E-69 T 14-10-2018 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR00418 DNA topoisomerase II family signature 521 537 6.7E-69 T 14-10-2018 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR00418 DNA topoisomerase II family signature 539 556 6.7E-69 T 14-10-2018 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR00418 DNA topoisomerase II family signature 454 468 6.7E-69 T 14-10-2018 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 PRINTS PR00418 DNA topoisomerase II family signature 559 571 6.7E-69 T 14-10-2018 C3497_14425 3a228229cf04506b82de32c48e8bb609 830 Pfam PF00204 DNA gyrase B 246 424 9.4E-58 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_10740 3580460c938542794f5bd715be9b70dd 949 Gene3D G3DSA:1.10.8.60 452 586 2.6E-39 T 14-10-2018 C3497_10740 3580460c938542794f5bd715be9b70dd 949 SUPERFAMILY SSF52540 591 888 4.33E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10740 3580460c938542794f5bd715be9b70dd 949 SUPERFAMILY SSF52540 263 571 3.64E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10740 3580460c938542794f5bd715be9b70dd 949 Gene3D G3DSA:1.10.8.60 816 911 7.9E-24 T 14-10-2018 C3497_10740 3580460c938542794f5bd715be9b70dd 949 Gene3D G3DSA:1.10.1780.10 109 255 2.3E-33 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C3497_10740 3580460c938542794f5bd715be9b70dd 949 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 816 895 8.9E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3497_10740 3580460c938542794f5bd715be9b70dd 949 Gene3D G3DSA:3.40.50.300 256 448 1.5E-71 T 14-10-2018 C3497_10740 3580460c938542794f5bd715be9b70dd 949 SMART SM01086 816 907 5.6E-28 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3497_10740 3580460c938542794f5bd715be9b70dd 949 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 676 694 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 C3497_10740 3580460c938542794f5bd715be9b70dd 949 SUPERFAMILY SSF81923 112 249 5.1E-24 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C3497_10740 3580460c938542794f5bd715be9b70dd 949 Gene3D G3DSA:4.10.860.10 514 572 2.6E-39 T 14-10-2018 C3497_10740 3580460c938542794f5bd715be9b70dd 949 SMART SM00382 302 449 7.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10740 3580460c938542794f5bd715be9b70dd 949 SMART SM00382 642 789 6.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10740 3580460c938542794f5bd715be9b70dd 949 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 200 248 2.1E-15 T 14-10-2018 IPR004176 Clp, N-terminal C3497_10740 3580460c938542794f5bd715be9b70dd 949 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 123 171 3.2E-7 T 14-10-2018 IPR004176 Clp, N-terminal C3497_10740 3580460c938542794f5bd715be9b70dd 949 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 307 440 2.2E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_10740 3580460c938542794f5bd715be9b70dd 949 Gene3D G3DSA:3.40.50.300 595 814 1.4E-87 T 14-10-2018 C3497_10740 3580460c938542794f5bd715be9b70dd 949 Pfam PF07724 AAA domain (Cdc48 subfamily) 641 810 9.7E-52 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_10740 3580460c938542794f5bd715be9b70dd 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 691 709 1.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_10740 3580460c938542794f5bd715be9b70dd 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 753 767 1.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_10740 3580460c938542794f5bd715be9b70dd 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 738 1.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_10740 3580460c938542794f5bd715be9b70dd 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_02415 0cf1de96dc579c8df4f310946fe32cf8 525 Pfam PF00795 Carbon-nitrogen hydrolase 252 486 7.5E-33 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C3497_02415 0cf1de96dc579c8df4f310946fe32cf8 525 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 33 505 22.427 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 C3497_02415 0cf1de96dc579c8df4f310946fe32cf8 525 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 86 467 3.4E-103 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 C3497_02415 0cf1de96dc579c8df4f310946fe32cf8 525 Gene3D G3DSA:3.60.110.10 266 488 1.1E-19 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3497_02415 0cf1de96dc579c8df4f310946fe32cf8 525 SUPERFAMILY SSF56317 240 499 2.49E-45 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3497_01880 5766a2e6b6e322203d40acc539dabc7b 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01880 5766a2e6b6e322203d40acc539dabc7b 91 Pfam PF00203 Ribosomal protein S19 3 83 8.6E-38 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01880 5766a2e6b6e322203d40acc539dabc7b 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.1E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01880 5766a2e6b6e322203d40acc539dabc7b 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.1E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01880 5766a2e6b6e322203d40acc539dabc7b 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.1E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01880 5766a2e6b6e322203d40acc539dabc7b 91 Gene3D G3DSA:3.30.860.10 1 91 4.9E-42 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01880 5766a2e6b6e322203d40acc539dabc7b 91 PIRSF PIRSF002144 1 91 8.7E-34 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01880 5766a2e6b6e322203d40acc539dabc7b 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 26.326 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01880 5766a2e6b6e322203d40acc539dabc7b 91 SUPERFAMILY SSF54570 3 84 1.02E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01880 5766a2e6b6e322203d40acc539dabc7b 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 90 3.7E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3497_03650 4cb268c81fef5f1c85b750456c6cd5e7 562 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 14 524 1.8E-114 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit C3497_11710 75fd65773b5d08df41b1d567f843e362 424 Gene3D G3DSA:1.20.1600.10 22 424 6.7E-63 T 14-10-2018 C3497_11710 75fd65773b5d08df41b1d567f843e362 424 Pfam PF02321 Outer membrane efflux protein 244 421 2.5E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_11710 75fd65773b5d08df41b1d567f843e362 424 Pfam PF02321 Outer membrane efflux protein 34 220 3.2E-19 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_11710 75fd65773b5d08df41b1d567f843e362 424 SUPERFAMILY SSF56954 6 422 3.66E-68 T 14-10-2018 C3497_07780 54fb95cfe050ba007698d61c07171e0d 461 Gene3D G3DSA:3.30.565.10 307 432 1.9E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_07780 54fb95cfe050ba007698d61c07171e0d 461 SMART SM00304 168 220 0.0076 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_07780 54fb95cfe050ba007698d61c07171e0d 461 SUPERFAMILY SSF55874 314 431 2.44E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_07780 54fb95cfe050ba007698d61c07171e0d 461 Gene3D G3DSA:1.10.287.130 165 297 1.7E-6 T 14-10-2018 C3497_07780 54fb95cfe050ba007698d61c07171e0d 461 Pfam PF07730 Histidine kinase 236 303 7.2E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 C3497_03420 3181d308a6d95f9267a1fcea77221ac8 138 SUPERFAMILY SSF110857 5 117 1.57E-20 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily C3497_03420 3181d308a6d95f9267a1fcea77221ac8 138 Gene3D G3DSA:3.10.490.10 1 105 1.9E-30 T 14-10-2018 C3497_03420 3181d308a6d95f9267a1fcea77221ac8 138 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 116 1.1E-21 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like C3497_13795 0f74ea25e6018c3dd4efbd49a7da0ec2 202 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 31 202 1.8E-53 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 C3497_13795 0f74ea25e6018c3dd4efbd49a7da0ec2 202 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 2 24 7.5E-6 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 C3497_13795 0f74ea25e6018c3dd4efbd49a7da0ec2 202 Gene3D G3DSA:3.40.50.300 9 202 1.4E-62 T 14-10-2018 C3497_13795 0f74ea25e6018c3dd4efbd49a7da0ec2 202 SUPERFAMILY SSF52540 11 202 1.08E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13795 0f74ea25e6018c3dd4efbd49a7da0ec2 202 PIRSF PIRSF015617 4 202 3.0E-62 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 C3497_13795 0f74ea25e6018c3dd4efbd49a7da0ec2 202 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 27 202 2.0E-63 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 C3497_00040 17ac616a42e2ce99bbda3c5fcb636dd5 134 TIGRFAM TIGR02801 tolR: protein TolR 7 130 1.6E-38 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 C3497_00040 17ac616a42e2ce99bbda3c5fcb636dd5 134 Gene3D G3DSA:3.30.420.270 51 124 3.0E-11 T 14-10-2018 C3497_00040 17ac616a42e2ce99bbda3c5fcb636dd5 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 4 131 1.5E-25 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 C3497_10995 95d8079a107a54f5fc96d3fb4d3a824d 467 Pfam PF07731 Multicopper oxidase 219 332 2.8E-22 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 C3497_10995 95d8079a107a54f5fc96d3fb4d3a824d 467 SUPERFAMILY SSF49503 60 193 2.9E-39 T 14-10-2018 IPR008972 Cupredoxin C3497_10995 95d8079a107a54f5fc96d3fb4d3a824d 467 Gene3D G3DSA:2.60.40.420 71 193 5.9E-73 T 14-10-2018 IPR008972 Cupredoxin C3497_10995 95d8079a107a54f5fc96d3fb4d3a824d 467 ProSitePatterns PS00080 Multicopper oxidases signature 2. 317 328 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 C3497_10995 95d8079a107a54f5fc96d3fb4d3a824d 467 Pfam PF07732 Multicopper oxidase 84 191 5.1E-35 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 C3497_10995 95d8079a107a54f5fc96d3fb4d3a824d 467 SUPERFAMILY SSF49503 174 328 5.22E-31 T 14-10-2018 IPR008972 Cupredoxin C3497_10995 95d8079a107a54f5fc96d3fb4d3a824d 467 Gene3D G3DSA:2.60.40.420 194 330 5.9E-73 T 14-10-2018 IPR008972 Cupredoxin C3497_03120 48495c1b9f99eda43f1843f34e44f199 334 PIRSF PIRSF006470 1 329 4.4E-137 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 C3497_03120 48495c1b9f99eda43f1843f34e44f199 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 312 4.2E-107 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 C3497_03120 48495c1b9f99eda43f1843f34e44f199 334 Gene3D G3DSA:3.40.190.170 24 326 7.8E-104 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily C3497_03120 48495c1b9f99eda43f1843f34e44f199 334 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 283 3.9E-99 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 C3497_03120 48495c1b9f99eda43f1843f34e44f199 334 SUPERFAMILY SSF53850 153 281 1.09E-7 T 14-10-2018 C3497_03630 27e2ed2eaefd97f17612c9e67e9881a1 363 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 360 2.5E-54 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 C3497_03630 27e2ed2eaefd97f17612c9e67e9881a1 363 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 103 7.6E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain C3497_03630 27e2ed2eaefd97f17612c9e67e9881a1 363 SUPERFAMILY SSF53927 7 148 1.09E-46 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C3497_03630 27e2ed2eaefd97f17612c9e67e9881a1 363 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 356 5.2E-116 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 C3497_03630 27e2ed2eaefd97f17612c9e67e9881a1 363 Gene3D G3DSA:3.40.430.10 140 361 1.1E-68 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C3497_03630 27e2ed2eaefd97f17612c9e67e9881a1 363 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 C3497_03630 27e2ed2eaefd97f17612c9e67e9881a1 363 Pfam PF01872 RibD C-terminal domain 151 355 2.7E-44 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 C3497_03630 27e2ed2eaefd97f17612c9e67e9881a1 363 SUPERFAMILY SSF53597 149 358 4.32E-57 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C3497_03630 27e2ed2eaefd97f17612c9e67e9881a1 363 PIRSF PIRSF006769 3 361 2.8E-126 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 C3497_03630 27e2ed2eaefd97f17612c9e67e9881a1 363 Gene3D G3DSA:3.40.140.10 2 139 2.7E-44 T 14-10-2018 C3497_09080 40499392fdd8682645eb775c56e24519 468 Pfam PF11067 Protein of unknown function (DUF2868) 158 426 2.3E-69 T 14-10-2018 IPR021296 Protein of unknown function DUF2868 C3497_03275 1553ab100794aaecb004835794eda3c8 254 SMART SM00448 6 120 2.9E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_03275 1553ab100794aaecb004835794eda3c8 254 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 240 4.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_03275 1553ab100794aaecb004835794eda3c8 254 SUPERFAMILY SSF52172 5 134 3.13E-43 T 14-10-2018 IPR011006 CheY-like superfamily C3497_03275 1553ab100794aaecb004835794eda3c8 254 Gene3D G3DSA:3.40.50.2300 1 135 8.4E-39 T 14-10-2018 C3497_03275 1553ab100794aaecb004835794eda3c8 254 Pfam PF00072 Response regulator receiver domain 8 121 5.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_03275 1553ab100794aaecb004835794eda3c8 254 SMART SM00862 164 240 1.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_03275 1553ab100794aaecb004835794eda3c8 254 Gene3D G3DSA:1.10.10.10 136 244 1.1E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_03275 1553ab100794aaecb004835794eda3c8 254 SUPERFAMILY SSF46894 140 241 3.12E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 339 360 2.1E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 133 149 2.1E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 118 133 2.1E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 157 170 2.1E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 Pfam PF00750 tRNA synthetases class I (R) 99 174 1.8E-11 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 Pfam PF00750 tRNA synthetases class I (R) 304 435 1.7E-11 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 SUPERFAMILY SSF55190 5 110 3.79E-24 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 SUPERFAMILY SSF52374 115 480 6.97E-89 T 14-10-2018 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 587 25.661 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 SMART SM01016 7 90 6.6E-35 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 Gene3D G3DSA:1.10.730.10 465 587 1.2E-34 T 14-10-2018 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 9 90 1.5E-24 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 Gene3D G3DSA:3.30.1360.70 4 107 5.3E-25 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 128 137 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 9 587 1.1E-127 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 SMART SM00836 470 587 6.9E-50 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 Pfam PF05746 DALR anticodon binding domain 470 587 1.9E-34 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 C3497_00960 4921a26b916870ee1dfafe64479c48aa 587 SUPERFAMILY SSF47323 465 587 3.73E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_06375 1f61fbc50c5b0c2efa9262ae13239ec4 829 Pfam PF02687 FtsX-like permease family 288 384 1.4E-5 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3497_06375 1f61fbc50c5b0c2efa9262ae13239ec4 829 Pfam PF02687 FtsX-like permease family 733 819 9.4E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3497_04060 e7370fa5e3b55d78a889ae5b2a22407b 350 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 237 256 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 C3497_04060 e7370fa5e3b55d78a889ae5b2a22407b 350 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 345 9.4E-157 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 C3497_04060 e7370fa5e3b55d78a889ae5b2a22407b 350 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 350 52.794 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 C3497_04060 e7370fa5e3b55d78a889ae5b2a22407b 350 Gene3D G3DSA:3.40.718.10 1 350 2.9E-152 T 14-10-2018 C3497_04060 e7370fa5e3b55d78a889ae5b2a22407b 350 SMART SM01329 2 346 1.0E-212 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 C3497_04060 e7370fa5e3b55d78a889ae5b2a22407b 350 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 346 1.7E-135 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 C3497_04060 e7370fa5e3b55d78a889ae5b2a22407b 350 SUPERFAMILY SSF53659 1 350 7.92E-126 T 14-10-2018 C3497_02030 796ccbb3a24248701a1d9d00f13168f5 518 SUPERFAMILY SSF53335 18 517 2.43E-143 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_02030 796ccbb3a24248701a1d9d00f13168f5 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 277 289 1.9E-20 T 14-10-2018 C3497_02030 796ccbb3a24248701a1d9d00f13168f5 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 203 217 1.9E-20 T 14-10-2018 C3497_02030 796ccbb3a24248701a1d9d00f13168f5 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 180 196 1.9E-20 T 14-10-2018 C3497_02030 796ccbb3a24248701a1d9d00f13168f5 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 311 335 1.9E-20 T 14-10-2018 C3497_02030 796ccbb3a24248701a1d9d00f13168f5 518 Gene3D G3DSA:1.20.1260.30 15 147 3.0E-43 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily C3497_02030 796ccbb3a24248701a1d9d00f13168f5 518 Pfam PF02384 N-6 DNA Methylase 156 478 1.2E-117 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 C3497_02030 796ccbb3a24248701a1d9d00f13168f5 518 Gene3D G3DSA:3.40.50.150 157 461 8.4E-122 T 14-10-2018 C3497_02030 796ccbb3a24248701a1d9d00f13168f5 518 Pfam PF12161 HsdM N-terminal domain 18 134 2.7E-25 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain C3497_02030 796ccbb3a24248701a1d9d00f13168f5 518 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 280 286 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3497_00965 6218fbd59af9bb6afdf6da4e2bd33e19 189 SUPERFAMILY SSF110997 113 186 2.09E-16 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3497_00965 6218fbd59af9bb6afdf6da4e2bd33e19 189 Gene3D G3DSA:3.30.70.1070 108 188 5.5E-13 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3497_00965 6218fbd59af9bb6afdf6da4e2bd33e19 189 Pfam PF05036 Sporulation related domain 114 186 1.0E-16 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 C3497_09485 12c8838217c9fb47d7fcbdacdd43eebc 343 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 342 1.4E-94 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 C3497_09485 12c8838217c9fb47d7fcbdacdd43eebc 343 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 342 47.125 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 C3497_09485 12c8838217c9fb47d7fcbdacdd43eebc 343 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 4.8E-21 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 C3497_09485 12c8838217c9fb47d7fcbdacdd43eebc 343 SUPERFAMILY SSF46589 13 99 8.37E-20 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 C3497_09485 12c8838217c9fb47d7fcbdacdd43eebc 343 Gene3D G3DSA:3.30.930.10 7 343 1.2E-112 T 14-10-2018 C3497_09485 12c8838217c9fb47d7fcbdacdd43eebc 343 Pfam PF01409 tRNA synthetases class II core domain (F) 92 342 1.8E-95 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 C3497_09485 12c8838217c9fb47d7fcbdacdd43eebc 343 SUPERFAMILY SSF55681 92 343 1.24E-75 T 14-10-2018 C3497_14630 2d530fa71c24a96b5f5022691941b8e2 315 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 24 67 1.2E-8 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3497_14630 2d530fa71c24a96b5f5022691941b8e2 315 Gene3D G3DSA:3.20.20.70 71 287 3.0E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_14630 2d530fa71c24a96b5f5022691941b8e2 315 TIGRFAM TIGR00510 lipA: lipoyl synthase 25 308 6.3E-131 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3497_14630 2d530fa71c24a96b5f5022691941b8e2 315 Pfam PF04055 Radical SAM superfamily 85 245 2.2E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_14630 2d530fa71c24a96b5f5022691941b8e2 315 SMART SM00729 78 287 1.2E-12 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3497_14630 2d530fa71c24a96b5f5022691941b8e2 315 PIRSF PIRSF005963 2 314 2.5E-130 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3497_14630 2d530fa71c24a96b5f5022691941b8e2 315 SUPERFAMILY SSF102114 44 310 7.32E-73 T 14-10-2018 C3497_14630 2d530fa71c24a96b5f5022691941b8e2 315 Hamap MF_00206 Lipoyl synthase [lipA]. 1 315 158.38 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3497_10965 150b95c18b310d888ec3132a0a373aae 55 Pfam PF11666 Protein of unknown function (DUF2933) 1 50 6.5E-24 T 14-10-2018 IPR021682 Protein of unknown function DUF2933 C3497_04530 018ea53caeea26ddcd980c1b7f0c9954 434 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 425 9.8E-135 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_04530 018ea53caeea26ddcd980c1b7f0c9954 434 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 10 425 1.5E-174 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 C3497_04530 018ea53caeea26ddcd980c1b7f0c9954 434 Gene3D G3DSA:3.90.1150.10 294 433 5.6E-52 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_04530 018ea53caeea26ddcd980c1b7f0c9954 434 Gene3D G3DSA:3.40.640.10 9 290 1.9E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_04530 018ea53caeea26ddcd980c1b7f0c9954 434 SUPERFAMILY SSF53383 8 425 4.45E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_04530 018ea53caeea26ddcd980c1b7f0c9954 434 PIRSF PIRSF001434 1 429 1.4E-130 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_04530 018ea53caeea26ddcd980c1b7f0c9954 434 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_02650 fbde49dead97eb73825ff3e3390f9087 617 SUPERFAMILY SSF82866 407 605 2.62E-41 T 14-10-2018 C3497_02650 fbde49dead97eb73825ff3e3390f9087 617 Gene3D G3DSA:3.30.1360.200 287 428 2.5E-58 T 14-10-2018 C3497_02650 fbde49dead97eb73825ff3e3390f9087 617 Pfam PF02355 Protein export membrane protein 429 597 1.5E-19 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial C3497_02650 fbde49dead97eb73825ff3e3390f9087 617 Pfam PF07549 SecD/SecF GG Motif 126 146 6.2E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site C3497_02650 fbde49dead97eb73825ff3e3390f9087 617 Gene3D G3DSA:1.20.1640.10 430 610 1.3E-10 T 14-10-2018 C3497_02650 fbde49dead97eb73825ff3e3390f9087 617 Gene3D G3DSA:3.30.70.3400 234 429 2.5E-58 T 14-10-2018 C3497_02650 fbde49dead97eb73825ff3e3390f9087 617 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 612 48.062 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 C3497_02650 fbde49dead97eb73825ff3e3390f9087 617 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 356 590 3.7E-75 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3497_02650 fbde49dead97eb73825ff3e3390f9087 617 Pfam PF13721 SecD export protein N-terminal TM region 1 109 3.4E-33 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain C3497_02650 fbde49dead97eb73825ff3e3390f9087 617 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 129 597 2.5E-147 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 C3497_00370 d50cf7958754509f07459d5f06e48022 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 359 74.027 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C3497_00370 d50cf7958754509f07459d5f06e48022 360 Pfam PF01761 3-dehydroquinate synthase 67 324 3.7E-108 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C3497_00370 d50cf7958754509f07459d5f06e48022 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 347 5.1E-116 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C3497_00370 d50cf7958754509f07459d5f06e48022 360 Gene3D G3DSA:1.20.1090.10 173 360 8.2E-64 T 14-10-2018 C3497_00370 d50cf7958754509f07459d5f06e48022 360 SUPERFAMILY SSF56796 5 352 4.84E-119 T 14-10-2018 C3497_00370 d50cf7958754509f07459d5f06e48022 360 PIRSF PIRSF001455 12 358 4.1E-107 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C3497_00370 d50cf7958754509f07459d5f06e48022 360 Gene3D G3DSA:3.40.50.1970 1 172 6.3E-68 T 14-10-2018 C3497_00355 b75ac16d1d56e3a16dc8231b5a536333 181 Gene3D G3DSA:2.30.30.830 82 174 1.3E-33 T 14-10-2018 C3497_00355 b75ac16d1d56e3a16dc8231b5a536333 181 Pfam PF04351 Pilus assembly protein, PilP 28 173 3.2E-50 T 14-10-2018 IPR007446 Pilus assembly protein PilP C3497_00355 b75ac16d1d56e3a16dc8231b5a536333 181 PIRSF PIRSF016481 3 177 8.2E-45 T 14-10-2018 IPR007446 Pilus assembly protein PilP C3497_11390 96907cf74e2f53260a37cd608abc6417 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 1.7E-115 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 C3497_11390 96907cf74e2f53260a37cd608abc6417 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 49.354 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 C3497_11390 96907cf74e2f53260a37cd608abc6417 252 SUPERFAMILY SSF51366 1 251 7.85E-86 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3497_11390 96907cf74e2f53260a37cd608abc6417 252 Gene3D G3DSA:3.20.20.70 1 252 6.9E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_11390 96907cf74e2f53260a37cd608abc6417 252 Pfam PF00977 Histidine biosynthesis protein 5 234 5.0E-91 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 346 365 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 Gene3D G3DSA:1.25.40.80 137 291 4.7E-69 T 14-10-2018 C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 PRINTS PR00147 DNA photolyase signature 148 164 3.1E-28 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 PRINTS PR00147 DNA photolyase signature 385 399 3.1E-28 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 PRINTS PR00147 DNA photolyase signature 346 364 3.1E-28 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 PRINTS PR00147 DNA photolyase signature 326 342 3.1E-28 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 326 338 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 SUPERFAMILY SSF52425 2 187 8.24E-48 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 Pfam PF00875 DNA photolyase 4 176 9.0E-46 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 Pfam PF03441 FAD binding domain of DNA photolyase 277 475 3.9E-90 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 Gene3D G3DSA:1.10.579.10 295 480 9.7E-85 T 14-10-2018 C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 Gene3D G3DSA:3.40.50.620 5 214 4.7E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_02205 73782004d9dad6b6034c083dc3d3d85f 480 SUPERFAMILY SSF48173 203 479 4.32E-109 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 C3497_11420 7b263cda2bcaed1c3547b2db6b6f2167 213 Gene3D G3DSA:3.40.190.10 5 202 2.7E-72 T 14-10-2018 C3497_11420 7b263cda2bcaed1c3547b2db6b6f2167 213 SUPERFAMILY SSF53850 4 208 3.04E-66 T 14-10-2018 C3497_11420 7b263cda2bcaed1c3547b2db6b6f2167 213 Pfam PF01634 ATP phosphoribosyltransferase 53 208 3.4E-51 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 C3497_11420 7b263cda2bcaed1c3547b2db6b6f2167 213 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 4 188 3.3E-60 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 C3497_11420 7b263cda2bcaed1c3547b2db6b6f2167 213 Gene3D G3DSA:3.40.190.10 95 181 2.7E-72 T 14-10-2018 C3497_11420 7b263cda2bcaed1c3547b2db6b6f2167 213 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 3 213 56.756 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 C3497_11420 7b263cda2bcaed1c3547b2db6b6f2167 213 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 148 169 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 C3497_06295 9f144a6802b9857a216b272740e9b9f1 74 Pfam PF06988 NifT/FixU protein 1 67 5.8E-25 T 14-10-2018 IPR009727 NifT/FixU GO:0009399 C3497_06295 9f144a6802b9857a216b272740e9b9f1 74 SUPERFAMILY SSF159203 3 70 5.62E-21 T 14-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily C3497_06295 9f144a6802b9857a216b272740e9b9f1 74 Gene3D G3DSA:2.40.50.240 2 70 2.0E-23 T 14-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily C3497_06295 9f144a6802b9857a216b272740e9b9f1 74 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 3 70 5.7E-21 T 14-10-2018 IPR009727 NifT/FixU GO:0009399 C3497_00455 0b32c95c47ea8b15468ea60c833ed39b 322 Gene3D G3DSA:3.20.20.70 8 316 3.6E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_00455 0b32c95c47ea8b15468ea60c833ed39b 322 Pfam PF03060 Nitronate monooxygenase 95 308 3.8E-22 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 C3497_00455 0b32c95c47ea8b15468ea60c833ed39b 322 SUPERFAMILY SSF51412 9 309 2.9E-53 T 14-10-2018 C3497_02135 20a9e08ca855f40bec3b98db6ae0450a 389 SUPERFAMILY SSF53335 145 369 4.95E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_02135 20a9e08ca855f40bec3b98db6ae0450a 389 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3497_02135 20a9e08ca855f40bec3b98db6ae0450a 389 Gene3D G3DSA:3.40.50.150 170 366 1.8E-130 T 14-10-2018 C3497_02135 20a9e08ca855f40bec3b98db6ae0450a 389 Pfam PF02926 THUMP domain 35 155 5.7E-7 T 14-10-2018 IPR004114 THUMP domain GO:0003723 C3497_02135 20a9e08ca855f40bec3b98db6ae0450a 389 Gene3D G3DSA:3.30.2130.30 6 252 1.8E-130 T 14-10-2018 C3497_02135 20a9e08ca855f40bec3b98db6ae0450a 389 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 194 208 5.0E-5 T 14-10-2018 C3497_02135 20a9e08ca855f40bec3b98db6ae0450a 389 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 309 5.0E-5 T 14-10-2018 C3497_02135 20a9e08ca855f40bec3b98db6ae0450a 389 Pfam PF01170 Putative RNA methylase family UPF0020 163 368 6.7E-53 T 14-10-2018 IPR000241 Putative RNA methylase domain C3497_02135 20a9e08ca855f40bec3b98db6ae0450a 389 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 14-10-2018 IPR000241 Putative RNA methylase domain C3497_02135 20a9e08ca855f40bec3b98db6ae0450a 389 SMART SM00981 57 155 2.7E-18 T 14-10-2018 IPR004114 THUMP domain GO:0003723 C3497_12480 80f6e128d7a45f778151bb1c8c5a557f 277 SUPERFAMILY SSF51735 101 272 1.38E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_12480 80f6e128d7a45f778151bb1c8c5a557f 277 SUPERFAMILY SSF53223 2 100 4.66E-32 T 14-10-2018 C3497_12480 80f6e128d7a45f778151bb1c8c5a557f 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 273 32.721 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 C3497_12480 80f6e128d7a45f778151bb1c8c5a557f 277 Gene3D G3DSA:3.40.50.720 115 240 1.9E-81 T 14-10-2018 C3497_12480 80f6e128d7a45f778151bb1c8c5a557f 277 Gene3D G3DSA:3.40.50.10860 5 258 1.9E-81 T 14-10-2018 C3497_12480 80f6e128d7a45f778151bb1c8c5a557f 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 270 1.1E-82 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 C3497_12480 80f6e128d7a45f778151bb1c8c5a557f 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 114 195 1.1E-9 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase C3497_12480 80f6e128d7a45f778151bb1c8c5a557f 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 7.1E-25 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 C3497_05955 6702ec307202c26001a7330b60d32294 356 SMART SM00448 3 122 1.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05955 6702ec307202c26001a7330b60d32294 356 SUPERFAMILY SSF52738 163 348 2.62E-66 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal C3497_05955 6702ec307202c26001a7330b60d32294 356 Pfam PF01339 CheB methylesterase 165 343 1.7E-60 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 C3497_05955 6702ec307202c26001a7330b60d32294 356 Pfam PF00072 Response regulator receiver domain 5 110 4.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05955 6702ec307202c26001a7330b60d32294 356 PIRSF PIRSF000876 1 351 6.4E-132 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 C3497_05955 6702ec307202c26001a7330b60d32294 356 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 348 39.246 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 C3497_05955 6702ec307202c26001a7330b60d32294 356 Gene3D G3DSA:3.40.50.180 156 352 1.7E-72 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal C3497_05955 6702ec307202c26001a7330b60d32294 356 Gene3D G3DSA:3.40.50.2300 1 131 7.3E-30 T 14-10-2018 C3497_05955 6702ec307202c26001a7330b60d32294 356 SUPERFAMILY SSF52172 3 110 3.7E-27 T 14-10-2018 IPR011006 CheY-like superfamily C3497_02105 191efcaea50313396f9dc720f0c22b61 660 Gene3D G3DSA:3.30.565.10 499 655 2.1E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_02105 191efcaea50313396f9dc720f0c22b61 660 Gene3D G3DSA:1.10.3210.10 14 207 1.6E-8 T 14-10-2018 C3497_02105 191efcaea50313396f9dc720f0c22b61 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 648 1.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02105 191efcaea50313396f9dc720f0c22b61 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 629 1.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02105 191efcaea50313396f9dc720f0c22b61 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 595 1.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02105 191efcaea50313396f9dc720f0c22b61 660 Gene3D G3DSA:1.10.287.130 435 491 4.4E-6 T 14-10-2018 C3497_02105 191efcaea50313396f9dc720f0c22b61 660 SUPERFAMILY SSF47384 422 490 3.34E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_02105 191efcaea50313396f9dc720f0c22b61 660 SUPERFAMILY SSF55874 501 648 8.51E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_02105 191efcaea50313396f9dc720f0c22b61 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 543 649 1.8E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_02105 191efcaea50313396f9dc720f0c22b61 660 SMART SM00388 430 496 1.4E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_02105 191efcaea50313396f9dc720f0c22b61 660 SUPERFAMILY SSF109604 18 227 2.09E-7 T 14-10-2018 C3497_02105 191efcaea50313396f9dc720f0c22b61 660 SMART SM00387 539 651 3.5E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_10605 fcd98a22675ab97932973252b68a8dbb 186 Pfam PF01625 Peptide methionine sulfoxide reductase 13 165 3.5E-57 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C3497_10605 fcd98a22675ab97932973252b68a8dbb 186 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 11 157 2.7E-50 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C3497_10605 fcd98a22675ab97932973252b68a8dbb 186 SUPERFAMILY SSF55068 5 176 9.03E-69 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C3497_10605 fcd98a22675ab97932973252b68a8dbb 186 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 10 169 34.552 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C3497_10605 fcd98a22675ab97932973252b68a8dbb 186 Gene3D G3DSA:3.30.1060.10 1 174 5.2E-64 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 Pfam PF12848 ABC transporter 224 296 1.8E-9 T 14-10-2018 IPR032781 ABC-transporter extension domain C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 Pfam PF16326 ABC transporter C-terminal domain 565 633 9.6E-22 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 Gene3D G3DSA:3.40.50.300 281 546 2.3E-62 T 14-10-2018 C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 SMART SM00382 344 515 1.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 SMART SM00382 28 230 5.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 Pfam PF00005 ABC transporter 336 469 5.7E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 Gene3D G3DSA:1.10.287.380 556 638 8.8E-26 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 SUPERFAMILY SSF52540 312 516 2.85E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 SUPERFAMILY SSF52540 2 233 3.91E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 Pfam PF00005 ABC transporter 20 185 5.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_04660 1ce35c31cb6d46da6afd69274d5642f3 638 Gene3D G3DSA:3.40.50.300 9 279 1.0E-67 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 SUPERFAMILY SSF82714 183 264 8.63E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_11700 7036dfeb04798ca6562637728345c125 1053 SUPERFAMILY SSF82714 715 798 2.22E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_11700 7036dfeb04798ca6562637728345c125 1053 Gene3D G3DSA:3.30.70.1430 559 661 1.7E-261 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 SUPERFAMILY SSF82693 46 128 3.66E-21 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 Gene3D G3DSA:1.20.1640.10 14 507 1.7E-261 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 Pfam PF00873 AcrB/AcrD/AcrF family 12 1033 1.9E-238 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_11700 7036dfeb04798ca6562637728345c125 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_11700 7036dfeb04798ca6562637728345c125 1053 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 1.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_11700 7036dfeb04798ca6562637728345c125 1053 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 1.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_11700 7036dfeb04798ca6562637728345c125 1053 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_11700 7036dfeb04798ca6562637728345c125 1053 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_11700 7036dfeb04798ca6562637728345c125 1053 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_11700 7036dfeb04798ca6562637728345c125 1053 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_11700 7036dfeb04798ca6562637728345c125 1053 SUPERFAMILY SSF82866 291 497 3.66E-39 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 SUPERFAMILY SSF82693 137 324 1.57E-19 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 SUPERFAMILY SSF82866 798 1037 7.85E-51 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 Gene3D G3DSA:3.30.70.1320 135 327 1.7E-261 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 Gene3D G3DSA:1.20.1640.10 508 1029 1.7E-261 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 Gene3D G3DSA:3.30.2090.10 179 269 1.7E-261 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_11700 7036dfeb04798ca6562637728345c125 1053 Gene3D G3DSA:3.30.2090.10 713 801 1.7E-261 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_11700 7036dfeb04798ca6562637728345c125 1053 Gene3D G3DSA:3.30.70.1440 662 859 1.7E-261 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 Gene3D G3DSA:3.30.70.1430 42 809 1.7E-261 T 14-10-2018 C3497_11700 7036dfeb04798ca6562637728345c125 1053 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 C3497_11815 668f62d67029926261b36ef8abe8026a 188 Gene3D G3DSA:2.70.40.10 1 160 4.7E-52 T 14-10-2018 IPR036157 dUTPase-like superfamily C3497_11815 668f62d67029926261b36ef8abe8026a 188 Pfam PF00692 dUTPase 82 181 1.5E-6 T 14-10-2018 IPR029054 dUTPase-like C3497_11815 668f62d67029926261b36ef8abe8026a 188 SUPERFAMILY SSF51283 3 188 1.13E-51 T 14-10-2018 IPR036157 dUTPase-like superfamily C3497_11815 668f62d67029926261b36ef8abe8026a 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 188 8.7E-48 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 C3497_11815 668f62d67029926261b36ef8abe8026a 188 Hamap MF_00146 dCTP deaminase [dcd]. 1 188 28.271 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 C3497_01910 12470a41a31da27794d2ba315453d3d6 122 SMART SM01374 1 122 1.1E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 C3497_01910 12470a41a31da27794d2ba315453d3d6 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.3E-57 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 C3497_01910 12470a41a31da27794d2ba315453d3d6 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01910 12470a41a31da27794d2ba315453d3d6 122 Gene3D G3DSA:2.40.150.20 1 122 1.6E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 C3497_01910 12470a41a31da27794d2ba315453d3d6 122 SUPERFAMILY SSF50193 1 122 1.13E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 C3497_01910 12470a41a31da27794d2ba315453d3d6 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.128 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 C3497_01910 12470a41a31da27794d2ba315453d3d6 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.1E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 445 2.7E-175 T 14-10-2018 C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 8.4E-30 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 Gene3D G3DSA:3.40.50.12160 2 136 7.4E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 Gene3D G3DSA:3.80.30.20 144 380 3.8E-82 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 Pfam PF04055 Radical SAM superfamily 150 327 3.9E-30 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 443 5.2E-147 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 SMART SM00729 146 366 2.0E-60 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 Pfam PF01938 TRAM domain 380 445 8.3E-17 T 14-10-2018 IPR002792 TRAM domain C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 SUPERFAMILY SSF102114 125 373 2.49E-61 T 14-10-2018 C3497_11555 9a4c61cba1c4fd42c3a133165279fc13 450 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 447 73.291 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 C3497_09010 144c3e06b3f9b4a8d71ee1ebac32e6df 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_09010 144c3e06b3f9b4a8d71ee1ebac32e6df 294 Pfam PF03466 LysR substrate binding domain 86 280 1.2E-39 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_09010 144c3e06b3f9b4a8d71ee1ebac32e6df 294 Gene3D G3DSA:3.40.190.290 90 287 1.5E-31 T 14-10-2018 C3497_09010 144c3e06b3f9b4a8d71ee1ebac32e6df 294 SUPERFAMILY SSF53850 89 283 3.57E-37 T 14-10-2018 C3497_09010 144c3e06b3f9b4a8d71ee1ebac32e6df 294 SUPERFAMILY SSF46785 4 110 2.01E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_09010 144c3e06b3f9b4a8d71ee1ebac32e6df 294 Gene3D G3DSA:1.10.10.10 2 87 1.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 SMART SM00663 237 516 1.8E-179 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Gene3D G3DSA:1.10.132.30 643 792 4.4E-65 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Gene3D G3DSA:1.10.274.100 492 642 5.9E-39 T 14-10-2018 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 13 1381 18.953 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Gene3D G3DSA:1.10.1790.20 1140 1318 1.7E-66 T 14-10-2018 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 344 1.8E-86 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Pfam PF05000 RNA polymerase Rpb1, domain 4 675 765 8.7E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Gene3D G3DSA:2.40.50.100 1156 1219 1.7E-66 T 14-10-2018 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Gene3D G3DSA:2.40.50.100 950 1025 1.2E-26 T 14-10-2018 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Pfam PF04998 RNA polymerase Rpb1, domain 5 768 1320 1.6E-76 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 SUPERFAMILY SSF64484 18 1368 0.0 T 14-10-2018 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Gene3D G3DSA:1.10.40.90 376 418 1.5E-20 T 14-10-2018 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Pfam PF04983 RNA polymerase Rpb1, domain 3 491 646 8.5E-25 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Gene3D G3DSA:2.40.50.100 1026 1131 6.2E-31 T 14-10-2018 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Gene3D G3DSA:1.10.150.390 1320 1380 1.5E-28 T 14-10-2018 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 22 1371 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01830 509f6cede020a1f53ee4996a85406e14 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 346 487 1.0E-34 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_12920 2dac14a6f45930e705954033baf19459 459 Gene3D G3DSA:3.40.50.300 132 313 3.6E-58 T 14-10-2018 C3497_12920 2dac14a6f45930e705954033baf19459 459 SMART SM00382 163 306 1.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_12920 2dac14a6f45930e705954033baf19459 459 SUPERFAMILY SSF46689 357 458 1.15E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_12920 2dac14a6f45930e705954033baf19459 459 SMART SM00448 13 124 2.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_12920 2dac14a6f45930e705954033baf19459 459 Pfam PF00158 Sigma-54 interaction domain 143 309 9.8E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3497_12920 2dac14a6f45930e705954033baf19459 459 Gene3D G3DSA:1.10.8.60 314 390 5.8E-25 T 14-10-2018 C3497_12920 2dac14a6f45930e705954033baf19459 459 Gene3D G3DSA:1.10.10.60 412 459 9.7E-10 T 14-10-2018 C3497_12920 2dac14a6f45930e705954033baf19459 459 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3497_12920 2dac14a6f45930e705954033baf19459 459 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3497_12920 2dac14a6f45930e705954033baf19459 459 Pfam PF02954 Bacterial regulatory protein, Fis family 420 456 1.3E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_12920 2dac14a6f45930e705954033baf19459 459 SUPERFAMILY SSF52540 143 384 6.55E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12920 2dac14a6f45930e705954033baf19459 459 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3497_12920 2dac14a6f45930e705954033baf19459 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 459 1.8E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_12920 2dac14a6f45930e705954033baf19459 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 439 1.8E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_12920 2dac14a6f45930e705954033baf19459 459 Gene3D G3DSA:3.40.50.2300 14 131 6.0E-31 T 14-10-2018 C3497_12920 2dac14a6f45930e705954033baf19459 459 Pfam PF00072 Response regulator receiver domain 15 124 1.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_12920 2dac14a6f45930e705954033baf19459 459 SUPERFAMILY SSF52172 13 186 1.01E-38 T 14-10-2018 IPR011006 CheY-like superfamily C3497_08130 b4859dea6ff25eae1809034f1c903548 485 PIRSF PIRSF006247 1 485 8.6E-160 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 C3497_08130 b4859dea6ff25eae1809034f1c903548 485 Pfam PF02386 Cation transport protein 43 477 4.7E-64 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 C3497_11260 63cfce3f94ba4830737ad89dcf684fa1 298 SMART SM00382 56 207 6.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_11260 63cfce3f94ba4830737ad89dcf684fa1 298 Pfam PF05621 Bacterial TniB protein 23 278 4.2E-100 T 14-10-2018 IPR008868 Bacterial TniB C3497_11260 63cfce3f94ba4830737ad89dcf684fa1 298 Gene3D G3DSA:3.40.50.300 16 212 3.1E-19 T 14-10-2018 C3497_11260 63cfce3f94ba4830737ad89dcf684fa1 298 SUPERFAMILY SSF52540 15 282 4.63E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_08490 0ec4a3ee6368890d9f501f356d2a9e3e 341 SUPERFAMILY SSF47240 5 321 3.29E-35 T 14-10-2018 IPR009078 Ferritin-like superfamily C3497_08490 0ec4a3ee6368890d9f501f356d2a9e3e 341 Gene3D G3DSA:1.10.620.20 4 256 7.3E-10 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 C3497_08490 0ec4a3ee6368890d9f501f356d2a9e3e 341 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 95 270 4.5E-7 T 14-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 SUPERFAMILY SSF47781 65 133 1.42E-20 T 14-10-2018 IPR010994 RuvA domain 2-like C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 Pfam PF01330 RuvA N terminal domain 1 62 5.4E-19 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 Gene3D G3DSA:2.40.50.140 1 66 2.2E-24 T 14-10-2018 C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 SMART SM00278 108 127 0.0026 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 SMART SM00278 73 92 1.3 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 198 6.3E-51 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 Pfam PF07499 RuvA, C-terminal domain 156 199 6.1E-13 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 SUPERFAMILY SSF50249 1 63 1.54E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 Gene3D G3DSA:1.10.150.20 67 136 3.3E-25 T 14-10-2018 C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 Gene3D G3DSA:1.10.8.10 145 200 6.2E-6 T 14-10-2018 C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.1E-19 T 14-10-2018 C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 SUPERFAMILY SSF46929 156 200 1.96E-8 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily C3497_01370 2c02cea5d9aca691c3c22d7b9291ce7a 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 199 30.409 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 C3497_10945 a057abb2f0078c83047c2cfb5658319a 215 Gene3D G3DSA:1.20.120.1630 11 214 7.2E-24 T 14-10-2018 C3497_10945 a057abb2f0078c83047c2cfb5658319a 215 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 119 188 4.0E-7 T 14-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 C3497_01605 f93e06d8c2a409e6b7685bcbf1a6c815 517 Pfam PF13817 IS66 C-terminal element 469 507 2.2E-14 T 14-10-2018 IPR039552 Transposase IS66, C-terminal C3497_01605 f93e06d8c2a409e6b7685bcbf1a6c815 517 Pfam PF13007 Transposase C of IS166 homeodomain 30 111 8.9E-13 T 14-10-2018 IPR024463 Transposase TnpC, homeodomain C3497_01605 f93e06d8c2a409e6b7685bcbf1a6c815 517 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 160 4.6E-13 T 14-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 C3497_01605 f93e06d8c2a409e6b7685bcbf1a6c815 517 Pfam PF03050 Transposase IS66 family 177 462 7.1E-94 T 14-10-2018 IPR004291 Transposase, IS66 C3497_00600 5bc74fd06c5d3364afc02dc4834788c0 483 Gene3D G3DSA:1.10.645.10 1 483 3.7E-129 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_00600 5bc74fd06c5d3364afc02dc4834788c0 483 Pfam PF00374 Nickel-dependent hydrogenase 39 116 3.4E-20 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C3497_00600 5bc74fd06c5d3364afc02dc4834788c0 483 Pfam PF00374 Nickel-dependent hydrogenase 147 483 6.1E-58 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C3497_00600 5bc74fd06c5d3364afc02dc4834788c0 483 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 C3497_00600 5bc74fd06c5d3364afc02dc4834788c0 483 SUPERFAMILY SSF56762 3 483 6.41E-129 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_12835 d1c3af8cc3d90b2df1b008252fa375e8 220 Gene3D G3DSA:3.40.50.300 8 212 1.4E-6 T 14-10-2018 C3497_12835 d1c3af8cc3d90b2df1b008252fa375e8 220 Pfam PF03567 Sulfotransferase family 6 215 6.6E-15 T 14-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 C3497_12835 d1c3af8cc3d90b2df1b008252fa375e8 220 SUPERFAMILY SSF52540 9 217 9.4E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 9.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 9.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 9.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 287 2.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 Gene3D G3DSA:1.10.287.130 171 288 3.6E-19 T 14-10-2018 C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 Gene3D G3DSA:3.30.565.10 296 443 2.1E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 437 2.2E-104 T 14-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 SUPERFAMILY SSF47384 204 287 1.41E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 SMART SM00388 221 287 1.1E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 SMART SM00387 330 442 9.6E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 SUPERFAMILY SSF55874 276 433 6.29E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_10690 e98f9f6d796e32165416f4b2d7ca8dd5 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 436 2.7E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 SMART SM00382 89 242 5.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 Pfam PF06745 KaiC 73 139 1.2E-11 T 14-10-2018 IPR014774 KaiC-like domain C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 Gene3D G3DSA:3.30.230.10 322 456 3.6E-18 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 SUPERFAMILY SSF52540 66 289 6.9E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 Hamap MF_01498 DNA repair protein RadA [radA]. 21 453 43.76 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 Gene3D G3DSA:3.40.50.300 59 273 1.0E-39 T 14-10-2018 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 PRINTS PR01874 DNA repair protein radA signature 211 239 3.5E-93 T 14-10-2018 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 PRINTS PR01874 DNA repair protein radA signature 81 109 3.5E-93 T 14-10-2018 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 PRINTS PR01874 DNA repair protein radA signature 246 272 3.5E-93 T 14-10-2018 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 PRINTS PR01874 DNA repair protein radA signature 10 34 3.5E-93 T 14-10-2018 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 PRINTS PR01874 DNA repair protein radA signature 172 196 3.5E-93 T 14-10-2018 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 PRINTS PR01874 DNA repair protein radA signature 122 139 3.5E-93 T 14-10-2018 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 PRINTS PR01874 DNA repair protein radA signature 320 343 3.5E-93 T 14-10-2018 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 Pfam PF13541 Subunit ChlI of Mg-chelatase 344 428 1.2E-6 T 14-10-2018 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 449 1.9E-193 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 C3497_06765 4c1cc7ff8c7499dc07299d0d384844bc 457 SUPERFAMILY SSF54211 253 454 5.31E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_02540 89ba060426442d2691deec227413e250 316 Gene3D G3DSA:3.40.50.2020 150 291 3.7E-128 T 14-10-2018 C3497_02540 89ba060426442d2691deec227413e250 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 C3497_02540 89ba060426442d2691deec227413e250 316 SUPERFAMILY SSF53271 71 307 1.28E-61 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3497_02540 89ba060426442d2691deec227413e250 316 Gene3D G3DSA:3.40.50.2020 9 302 3.7E-128 T 14-10-2018 C3497_02540 89ba060426442d2691deec227413e250 316 SMART SM01400 6 123 6.7E-76 T 14-10-2018 C3497_02540 89ba060426442d2691deec227413e250 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 314 8.8E-121 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 C3497_02540 89ba060426442d2691deec227413e250 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 6 315 48.434 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 C3497_02540 89ba060426442d2691deec227413e250 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 3.6E-47 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 C3497_02540 89ba060426442d2691deec227413e250 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 314 5.7E-27 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 C3497_01045 9da4ab336e18c3d2a61f42245fc84ffa 277 Gene3D G3DSA:3.40.190.10 109 222 2.8E-90 T 14-10-2018 C3497_01045 9da4ab336e18c3d2a61f42245fc84ffa 277 Gene3D G3DSA:3.40.190.10 34 259 2.8E-90 T 14-10-2018 C3497_01045 9da4ab336e18c3d2a61f42245fc84ffa 277 SUPERFAMILY SSF53850 32 262 3.53E-30 T 14-10-2018 C3497_01045 9da4ab336e18c3d2a61f42245fc84ffa 277 Pfam PF12849 PBP superfamily domain 28 253 3.2E-27 T 14-10-2018 IPR024370 PBP domain C3497_12370 122383397414e82cd3f1a4ce6836b1c9 329 Pfam PF00953 Glycosyl transferase family 4 70 207 3.3E-24 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 C3497_03880 430c5ec5e4a972723db261391726d776 443 Pfam PF11741 AMIN domain 48 151 4.1E-24 T 14-10-2018 IPR021731 AMIN domain C3497_03880 430c5ec5e4a972723db261391726d776 443 Gene3D G3DSA:2.60.40.3500 36 154 3.8E-30 T 14-10-2018 C3497_03880 430c5ec5e4a972723db261391726d776 443 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 210 425 4.7E-51 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 C3497_03880 430c5ec5e4a972723db261391726d776 443 Gene3D G3DSA:3.40.630.40 196 438 3.8E-82 T 14-10-2018 C3497_03880 430c5ec5e4a972723db261391726d776 443 SUPERFAMILY SSF53187 208 428 3.14E-56 T 14-10-2018 C3497_03880 430c5ec5e4a972723db261391726d776 443 SMART SM00646 270 425 2.9E-64 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 C3497_08305 76033fc47accc94dc5b6878be377aaf4 222 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 190 4.1E-34 T 14-10-2018 C3497_08305 76033fc47accc94dc5b6878be377aaf4 222 Gene3D G3DSA:3.40.50.1000 4 217 1.6E-73 T 14-10-2018 IPR023214 HAD superfamily C3497_08305 76033fc47accc94dc5b6878be377aaf4 222 SUPERFAMILY SSF56784 2 216 7.22E-32 T 14-10-2018 IPR036412 HAD-like superfamily C3497_08305 76033fc47accc94dc5b6878be377aaf4 222 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 193 1.5E-22 T 14-10-2018 C3497_08305 76033fc47accc94dc5b6878be377aaf4 222 Gene3D G3DSA:1.20.1440.100 15 88 1.6E-73 T 14-10-2018 C3497_08305 76033fc47accc94dc5b6878be377aaf4 222 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 204 3.4E-40 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like C3497_04690 68c5f7ed755808857e577df95dbe3ccb 402 Gene3D G3DSA:3.40.50.2300 2 145 2.0E-29 T 14-10-2018 C3497_04690 68c5f7ed755808857e577df95dbe3ccb 402 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 314 1.0E-17 T 14-10-2018 IPR000160 GGDEF domain C3497_04690 68c5f7ed755808857e577df95dbe3ccb 402 SUPERFAMILY SSF55073 155 316 1.1E-19 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_04690 68c5f7ed755808857e577df95dbe3ccb 402 Gene3D G3DSA:3.30.70.270 146 322 5.7E-26 T 14-10-2018 C3497_04690 68c5f7ed755808857e577df95dbe3ccb 402 SMART SM00267 138 318 7.6E-16 T 14-10-2018 IPR000160 GGDEF domain C3497_04690 68c5f7ed755808857e577df95dbe3ccb 402 SUPERFAMILY SSF52172 10 146 1.71E-31 T 14-10-2018 IPR011006 CheY-like superfamily C3497_04690 68c5f7ed755808857e577df95dbe3ccb 402 Pfam PF00072 Response regulator receiver domain 12 126 7.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_04690 68c5f7ed755808857e577df95dbe3ccb 402 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 317 2.1E-17 T 14-10-2018 IPR000160 GGDEF domain C3497_04690 68c5f7ed755808857e577df95dbe3ccb 402 SMART SM00448 10 125 4.6E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Pfam PF00989 PAS fold 20 110 2.5E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SMART SM00091 9 74 0.0051 T 14-10-2018 IPR000014 PAS domain C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Pfam PF01627 Hpt domain 959 1037 2.4E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Gene3D G3DSA:1.20.1480.50 323 418 1.5E-8 T 14-10-2018 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Pfam PF02203 Tar ligand binding domain homologue 147 326 1.7E-13 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SUPERFAMILY SSF55785 21 114 2.79E-26 T 14-10-2018 IPR035965 PAS domain superfamily C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 540 653 2.7E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SUPERFAMILY SSF47384 413 493 4.9E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SUPERFAMILY SSF52172 795 917 7.68E-40 T 14-10-2018 IPR011006 CheY-like superfamily C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Gene3D G3DSA:3.30.450.20 17 141 7.1E-26 T 14-10-2018 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SMART SM00388 428 493 8.7E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SMART SM00387 540 655 2.1E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SUPERFAMILY SSF47226 895 1036 2.09E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Gene3D G3DSA:1.10.287.130 419 494 4.5E-23 T 14-10-2018 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Gene3D G3DSA:3.40.50.2300 791 916 5.4E-45 T 14-10-2018 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Pfam PF00072 Response regulator receiver domain 799 910 1.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Gene3D G3DSA:1.20.120.160 933 1044 2.6E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 125 1.7E-13 T 14-10-2018 IPR000014 PAS domain C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Pfam PF00512 His Kinase A (phospho-acceptor) domain 429 491 2.1E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SUPERFAMILY SSF158472 367 416 2.09E-8 T 14-10-2018 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SUPERFAMILY SSF55874 482 657 1.22E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Pfam PF00672 HAMP domain 367 413 6.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SMART SM00304 365 417 5.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 SMART SM00448 797 912 1.9E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 Gene3D G3DSA:3.30.565.10 495 658 9.2E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 594 4.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 633 4.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 652 4.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_00750 de1b0950f033a196ae8c8cfb3d3f0dd7 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 608 4.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_09745 38bd2921a433f653492973539a3224d6 195 Pfam PF11994 Protein of unknown function (DUF3489) 130 194 2.1E-20 T 14-10-2018 IPR021880 Protein of unknown function DUF3489 C3497_08010 7b60d9c7d9935b2429886a65639474b0 145 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 134 1.9E-35 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 C3497_08010 7b60d9c7d9935b2429886a65639474b0 145 Gene3D G3DSA:3.40.50.10110 1 137 1.2E-36 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily C3497_08010 7b60d9c7d9935b2429886a65639474b0 145 SUPERFAMILY SSF102400 2 138 9.15E-36 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily C3497_13350 49f0f64ee221fadcac7cb4d7ff919eb0 209 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 3 200 35.29 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like C3497_13350 49f0f64ee221fadcac7cb4d7ff919eb0 209 Gene3D G3DSA:3.40.50.1950 1 205 8.4E-81 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 C3497_13350 49f0f64ee221fadcac7cb4d7ff919eb0 209 Pfam PF02441 Flavoprotein 3 179 6.5E-26 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 C3497_13350 49f0f64ee221fadcac7cb4d7ff919eb0 209 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 5 198 2.0E-60 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like C3497_13350 49f0f64ee221fadcac7cb4d7ff919eb0 209 SUPERFAMILY SSF52507 3 200 6.02E-60 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 C3497_01055 5c48c80864bd23998901c47b11e0fc3b 607 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 68 599 1.2E-242 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 C3497_01055 5c48c80864bd23998901c47b11e0fc3b 607 Pfam PF00561 alpha/beta hydrolase fold 284 525 1.6E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_01055 5c48c80864bd23998901c47b11e0fc3b 607 SUPERFAMILY SSF53474 239 535 1.86E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_01055 5c48c80864bd23998901c47b11e0fc3b 607 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 109 281 9.8E-79 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 C3497_00995 a4d58ce86644939ef4fcd7d29951e51f 331 Gene3D G3DSA:3.40.190.10 197 274 3.9E-6 T 14-10-2018 C3497_00995 a4d58ce86644939ef4fcd7d29951e51f 331 Gene3D G3DSA:3.40.190.10 96 195 1.0E-17 T 14-10-2018 C3497_00995 a4d58ce86644939ef4fcd7d29951e51f 331 SUPERFAMILY SSF53850 103 307 1.24E-25 T 14-10-2018 C3497_00995 a4d58ce86644939ef4fcd7d29951e51f 331 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 77 1.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_00995 a4d58ce86644939ef4fcd7d29951e51f 331 SUPERFAMILY SSF46785 14 126 4.24E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_00995 a4d58ce86644939ef4fcd7d29951e51f 331 Pfam PF03466 LysR substrate binding domain 102 304 4.5E-25 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_00995 a4d58ce86644939ef4fcd7d29951e51f 331 Gene3D G3DSA:1.10.10.10 14 95 9.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_11890 bcced19d62b8018b6960924aa5e4d507 237 SUPERFAMILY SSF53448 1 221 1.8E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_11890 bcced19d62b8018b6960924aa5e4d507 237 Pfam PF00483 Nucleotidyl transferase 1 137 2.2E-23 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C3497_11890 bcced19d62b8018b6960924aa5e4d507 237 Gene3D G3DSA:3.90.550.10 1 224 2.6E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_05670 1ec6a74c803f12ffc1d18a41f7351444 119 Pfam PF09842 Predicted membrane protein (DUF2069) 10 109 1.9E-31 T 14-10-2018 IPR018643 Protein of unknown function DUF2069, membrane C3497_06160 c22e78266840e0093bbf929ebee027ea 295 PIRSF PIRSF000375 1 284 7.7E-129 T 14-10-2018 IPR016217 Nitrogen fixation, NifU C3497_06160 c22e78266840e0093bbf929ebee027ea 295 Pfam PF01106 NifU-like domain 217 279 1.9E-20 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 C3497_06160 c22e78266840e0093bbf929ebee027ea 295 Gene3D G3DSA:1.10.10.1100 137 190 1.2E-6 T 14-10-2018 C3497_06160 c22e78266840e0093bbf929ebee027ea 295 SUPERFAMILY SSF117916 208 285 7.41E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C3497_06160 c22e78266840e0093bbf929ebee027ea 295 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 226 283 2.0E-17 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 C3497_06160 c22e78266840e0093bbf929ebee027ea 295 Gene3D G3DSA:3.90.1010.10 1 136 6.0E-55 T 14-10-2018 C3497_06160 c22e78266840e0093bbf929ebee027ea 295 SUPERFAMILY SSF82649 2 131 3.14E-43 T 14-10-2018 C3497_06160 c22e78266840e0093bbf929ebee027ea 295 Pfam PF01592 NifU-like N terminal domain 4 125 8.8E-50 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 C3497_06160 c22e78266840e0093bbf929ebee027ea 295 Pfam PF04324 BFD-like [2Fe-2S] binding domain 135 185 4.7E-16 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain C3497_06160 c22e78266840e0093bbf929ebee027ea 295 TIGRFAM TIGR02000 NifU_proper: Fe-S cluster assembly protein NifU 1 283 4.2E-139 T 14-10-2018 IPR010238 NIF system FeS cluster assembly, NifU GO:0005506|GO:0016226|GO:0051536 C3497_06160 c22e78266840e0093bbf929ebee027ea 295 Gene3D G3DSA:3.30.300.130 209 289 7.0E-19 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C3497_05875 71d90ef82e16324aca2128bdde6029e6 362 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 30 295 1.7E-57 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 C3497_05875 71d90ef82e16324aca2128bdde6029e6 362 Gene3D G3DSA:3.40.50.2300 134 350 8.1E-140 T 14-10-2018 C3497_05875 71d90ef82e16324aca2128bdde6029e6 362 Gene3D G3DSA:3.40.50.2300 32 287 8.1E-140 T 14-10-2018 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 SMART SM01004 7 334 2.4E-240 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 127 141 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 PIRSF PIRSF001415 1 337 1.7E-148 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 Pfam PF00490 Delta-aminolevulinic acid dehydratase 10 332 6.1E-139 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 Gene3D G3DSA:3.20.20.70 2 338 7.3E-144 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_03545 e01b51dc47bfab56cf7272fb2dbedc9c 338 SUPERFAMILY SSF51569 6 335 1.47E-142 T 14-10-2018 C3497_07200 8791529cc162a40fe4cfa32c1a7ea18a 168 SUPERFAMILY SSF52833 1 154 7.6E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_07200 8791529cc162a40fe4cfa32c1a7ea18a 168 PIRSF PIRSF000239 1 166 2.8E-23 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3497_07200 8791529cc162a40fe4cfa32c1a7ea18a 168 Gene3D G3DSA:3.40.30.10 3 155 3.6E-42 T 14-10-2018 C3497_07200 8791529cc162a40fe4cfa32c1a7ea18a 168 Pfam PF00578 AhpC/TSA family 5 133 6.4E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3497_00980 6aab81b7f869c6b42c630d96a81121c3 882 Pfam PF11874 Domain of unknown function (DUF3394) 689 872 3.7E-61 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 C3497_00980 6aab81b7f869c6b42c630d96a81121c3 882 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 153 419 6.0E-47 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit C3497_00980 6aab81b7f869c6b42c630d96a81121c3 882 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 47 739 1.5E-205 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 35 731 2.1E-186 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 SUPERFAMILY SSF55021 657 732 1.33E-12 T 14-10-2018 C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 Pfam PF02824 TGS domain 406 462 5.6E-22 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 Gene3D G3DSA:3.30.460.10 211 343 3.5E-49 T 14-10-2018 C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 Gene3D G3DSA:3.10.20.30 400 469 1.8E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 SUPERFAMILY SSF81301 210 382 1.59E-60 T 14-10-2018 C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 SUPERFAMILY SSF81271 392 463 1.2E-19 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 Gene3D G3DSA:3.30.70.260 657 733 3.4E-18 T 14-10-2018 C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 Pfam PF04607 Region found in RelA / SpoT proteins 253 362 1.9E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 Pfam PF13328 HD domain 35 194 2.9E-51 T 14-10-2018 IPR003607 HD/PDEase domain C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 Pfam PF13291 ACT domain 657 732 2.1E-18 T 14-10-2018 IPR002912 ACT domain C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 SMART SM00954 253 363 1.3E-62 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 Gene3D G3DSA:1.10.3210.10 14 209 3.3E-49 T 14-10-2018 C3497_06560 b59f83fd13ccdc24dbf3abe6b74e8a1e 733 SUPERFAMILY SSF109604 19 208 5.65E-51 T 14-10-2018 C3497_03700 23cbdadb09c95639750645851b9b6818 204 Gene3D G3DSA:3.30.70.1560 68 168 8.7E-40 T 14-10-2018 C3497_03700 23cbdadb09c95639750645851b9b6818 204 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3497_03700 23cbdadb09c95639750645851b9b6818 204 Pfam PF00849 RNA pseudouridylate synthase 4 148 8.2E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_03700 23cbdadb09c95639750645851b9b6818 204 Gene3D G3DSA:3.30.70.580 1 67 1.6E-27 T 14-10-2018 C3497_03700 23cbdadb09c95639750645851b9b6818 204 SUPERFAMILY SSF55120 3 178 5.28E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_03700 23cbdadb09c95639750645851b9b6818 204 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 176 2.9E-55 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3497_14410 912da7b1d9562dc523df74de3ad38853 44 Pfam PF00468 Ribosomal protein L34 1 44 5.0E-23 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_14410 912da7b1d9562dc523df74de3ad38853 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.4E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_14410 912da7b1d9562dc523df74de3ad38853 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 24 1.0E-6 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_14410 912da7b1d9562dc523df74de3ad38853 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_14410 912da7b1d9562dc523df74de3ad38853 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.139 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01625 28ff144f9efde72e2c4b2ac8fbf97226 432 SUPERFAMILY SSF54631 202 338 4.79E-19 T 14-10-2018 C3497_01625 28ff144f9efde72e2c4b2ac8fbf97226 432 Pfam PF00571 CBS domain 287 335 0.0013 T 14-10-2018 IPR000644 CBS domain C3497_01625 28ff144f9efde72e2c4b2ac8fbf97226 432 Pfam PF01595 Domain of unknown function DUF21 9 195 3.1E-40 T 14-10-2018 IPR002550 CNNM, transmembrane domain C3497_01625 28ff144f9efde72e2c4b2ac8fbf97226 432 SUPERFAMILY SSF56176 347 428 4.09E-24 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3497_01625 28ff144f9efde72e2c4b2ac8fbf97226 432 SMART SM01091 349 429 7.4E-33 T 14-10-2018 IPR005170 Transporter-associated domain C3497_01625 28ff144f9efde72e2c4b2ac8fbf97226 432 Gene3D G3DSA:3.10.580.10 196 349 1.0E-30 T 14-10-2018 C3497_01625 28ff144f9efde72e2c4b2ac8fbf97226 432 Pfam PF03471 Transporter associated domain 350 427 1.9E-22 T 14-10-2018 IPR005170 Transporter-associated domain C3497_01625 28ff144f9efde72e2c4b2ac8fbf97226 432 Gene3D G3DSA:3.30.465.10 350 429 3.0E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3497_09375 8c191b14c5c98ed714ff2694634f6da1 142 SUPERFAMILY SSF140566 2 114 5.89E-23 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 C3497_09375 8c191b14c5c98ed714ff2694634f6da1 142 Pfam PF05130 FlgN protein 2 131 1.7E-26 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 C3497_09375 8c191b14c5c98ed714ff2694634f6da1 142 Gene3D G3DSA:1.20.58.300 1 114 9.3E-27 T 14-10-2018 C3497_09300 ed4236884c62813e4caab5a6ec954427 260 Pfam PF01311 Bacterial export proteins, family 1 14 247 9.5E-67 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 C3497_09300 ed4236884c62813e4caab5a6ec954427 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 3.6E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 C3497_09300 ed4236884c62813e4caab5a6ec954427 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 3.6E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 C3497_09300 ed4236884c62813e4caab5a6ec954427 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 3.6E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 C3497_09300 ed4236884c62813e4caab5a6ec954427 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 3.6E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 C3497_09300 ed4236884c62813e4caab5a6ec954427 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 256 1.2E-66 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 C3497_06630 185a825d867324b08bf7a24ecf0274ac 140 Gene3D G3DSA:3.30.420.270 61 133 1.4E-7 T 14-10-2018 C3497_06630 185a825d867324b08bf7a24ecf0274ac 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 136 2.2E-28 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 SUPERFAMILY SSF52518 23 363 3.61E-78 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 SUPERFAMILY SSF52518 292 478 7.36E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 7 279 5.6E-119 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 Pfam PF02780 Transketolase, C-terminal domain 492 608 7.5E-24 T 14-10-2018 IPR033248 Transketolase, C-terminal domain C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 9 612 6.7E-260 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 SUPERFAMILY SSF52922 489 614 1.57E-29 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 SMART SM00861 316 480 1.9E-73 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 Pfam PF02779 Transketolase, pyrimidine binding domain 315 476 1.5E-42 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 ProSitePatterns PS00801 Transketolase signature 1. 32 51 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 Gene3D G3DSA:3.40.50.970 313 488 9.6E-69 T 14-10-2018 C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 6 617 45.966 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3497_03835 c56c7d5ae85c2c8f368705436abe8d8e 620 Gene3D G3DSA:3.40.50.920 492 616 5.6E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3497_06015 3ebe0b281186f16975b43e8c5d00ce9e 409 SUPERFAMILY SSF52402 5 174 1.87E-46 T 14-10-2018 C3497_06015 3ebe0b281186f16975b43e8c5d00ce9e 409 Pfam PF00764 Arginosuccinate synthase 8 401 1.2E-151 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3497_06015 3ebe0b281186f16975b43e8c5d00ce9e 409 SUPERFAMILY SSF69864 180 404 1.31E-93 T 14-10-2018 C3497_06015 3ebe0b281186f16975b43e8c5d00ce9e 409 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 402 1.3E-141 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3497_06015 3ebe0b281186f16975b43e8c5d00ce9e 409 Gene3D G3DSA:3.40.50.620 7 179 2.3E-155 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_06015 3ebe0b281186f16975b43e8c5d00ce9e 409 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3497_06015 3ebe0b281186f16975b43e8c5d00ce9e 409 Gene3D G3DSA:1.20.5.470 381 405 7.7E-9 T 14-10-2018 C3497_06015 3ebe0b281186f16975b43e8c5d00ce9e 409 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3497_06015 3ebe0b281186f16975b43e8c5d00ce9e 409 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 406 50.837 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3497_06015 3ebe0b281186f16975b43e8c5d00ce9e 409 Gene3D G3DSA:3.90.1260.10 67 360 2.3E-155 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3497_09945 ce06b849e8f6c22ebcbe268a5c59dc62 463 PIRSF PIRSF000167 6 460 4.6E-161 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 C3497_09945 ce06b849e8f6c22ebcbe268a5c59dc62 463 Pfam PF04055 Radical SAM superfamily 63 233 2.3E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_09945 ce06b849e8f6c22ebcbe268a5c59dc62 463 SMART SM00729 57 278 4.3E-42 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3497_09945 ce06b849e8f6c22ebcbe268a5c59dc62 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 9 463 9.7E-178 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 C3497_09945 ce06b849e8f6c22ebcbe268a5c59dc62 463 SUPERFAMILY SSF102114 8 450 1.83E-132 T 14-10-2018 C3497_09945 ce06b849e8f6c22ebcbe268a5c59dc62 463 Pfam PF06969 HemN C-terminal domain 369 437 8.2E-9 T 14-10-2018 IPR010723 HemN, C-terminal C3497_09945 ce06b849e8f6c22ebcbe268a5c59dc62 463 Gene3D G3DSA:3.80.30.20 3 369 2.7E-121 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C3497_09945 ce06b849e8f6c22ebcbe268a5c59dc62 463 Gene3D G3DSA:1.10.10.920 370 463 3.0E-32 T 14-10-2018 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 Gene3D G3DSA:1.20.1640.10 500 1015 8.0E-244 T 14-10-2018 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 Gene3D G3DSA:3.30.2090.10 175 266 8.0E-244 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 Gene3D G3DSA:3.30.70.1430 42 807 8.0E-244 T 14-10-2018 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 Pfam PF00873 AcrB/AcrD/AcrF family 9 1017 1.8E-153 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 SUPERFAMILY SSF82714 180 258 1.57E-6 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 SUPERFAMILY SSF82866 292 480 8.37E-40 T 14-10-2018 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 Gene3D G3DSA:1.20.1640.10 13 499 8.0E-244 T 14-10-2018 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 SUPERFAMILY SSF82693 43 131 1.52E-21 T 14-10-2018 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.4E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 PRINTS PR00702 Acriflavin resistance protein family signature 325 348 2.4E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 PRINTS PR00702 Acriflavin resistance protein family signature 379 403 2.4E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.4E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 PRINTS PR00702 Acriflavin resistance protein family signature 432 455 2.4E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 SUPERFAMILY SSF82866 810 1021 3.01E-42 T 14-10-2018 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 Gene3D G3DSA:3.30.2090.10 712 799 8.0E-244 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 SUPERFAMILY SSF82714 723 794 3.92E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 Gene3D G3DSA:3.30.70.1320 134 319 8.0E-244 T 14-10-2018 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 Gene3D G3DSA:3.30.70.1430 557 663 8.0E-244 T 14-10-2018 C3497_13720 625175cf8d7a2dccd091737895ddcb81 1035 Gene3D G3DSA:3.30.70.1440 664 855 8.0E-244 T 14-10-2018 C3497_04055 f3475e18289406c883e1aea1200e25fd 212 SUPERFAMILY SSF52016 1 204 8.04E-65 T 14-10-2018 C3497_04055 f3475e18289406c883e1aea1200e25fd 212 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.078 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 C3497_04055 f3475e18289406c883e1aea1200e25fd 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.2E-86 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 C3497_04055 f3475e18289406c883e1aea1200e25fd 212 Gene3D G3DSA:3.20.19.10 1 184 1.4E-77 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 C3497_04055 f3475e18289406c883e1aea1200e25fd 212 Pfam PF00694 Aconitase C-terminal domain 1 132 3.2E-36 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 SUPERFAMILY SSF82714 185 265 3.53E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13010 87d6190512df56da12fe0f68dd522650 1042 Gene3D G3DSA:3.30.2090.10 712 800 1.1E-247 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13010 87d6190512df56da12fe0f68dd522650 1042 SUPERFAMILY SSF82714 714 796 1.24E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13010 87d6190512df56da12fe0f68dd522650 1042 Gene3D G3DSA:3.30.70.1440 662 860 1.1E-247 T 14-10-2018 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 SUPERFAMILY SSF82693 563 648 3.92E-6 T 14-10-2018 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 Gene3D G3DSA:3.30.70.1430 560 661 1.1E-247 T 14-10-2018 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 SUPERFAMILY SSF82693 41 137 7.67E-16 T 14-10-2018 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 Gene3D G3DSA:3.30.70.1430 41 808 1.1E-247 T 14-10-2018 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 Gene3D G3DSA:1.20.1640.10 14 503 1.1E-247 T 14-10-2018 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 Pfam PF00873 AcrB/AcrD/AcrF family 11 1019 6.7E-160 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 Gene3D G3DSA:3.30.70.1320 139 328 1.1E-247 T 14-10-2018 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 2.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 2.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 2.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 Gene3D G3DSA:3.30.2090.10 181 270 1.1E-247 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13010 87d6190512df56da12fe0f68dd522650 1042 Gene3D G3DSA:1.20.1640.10 504 1017 1.1E-247 T 14-10-2018 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 SUPERFAMILY SSF82866 291 488 8.24E-35 T 14-10-2018 C3497_13010 87d6190512df56da12fe0f68dd522650 1042 SUPERFAMILY SSF82866 802 1025 3.4E-40 T 14-10-2018 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 SMART SM00490 253 334 2.1E-25 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 SMART SM00956 414 517 2.8E-53 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 605 4.6E-237 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 Pfam PF00271 Helicase conserved C-terminal domain 228 333 1.0E-16 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 Gene3D G3DSA:1.10.150.80 538 607 3.4E-22 T 14-10-2018 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 Pfam PF16124 RecQ zinc-binding 346 407 1.0E-17 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 SMART SM00341 534 608 5.9E-13 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 Pfam PF09382 RQC domain 409 520 1.3E-39 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 SUPERFAMILY SSF52540 210 456 6.16E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 Pfam PF00570 HRDC domain 540 604 1.5E-21 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 Gene3D G3DSA:1.10.10.10 344 521 2.3E-50 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 SMART SM00487 20 220 4.6E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 SUPERFAMILY SSF52540 9 199 2.6E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 SUPERFAMILY SSF47819 535 606 1.66E-21 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 Pfam PF00270 DEAD/DEAH box helicase 28 190 1.8E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 Gene3D G3DSA:3.40.50.300 211 343 5.5E-40 T 14-10-2018 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 14 465 1.4E-155 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 C3497_10600 0b69feb46334e1986c9160e697a6d7d7 608 Gene3D G3DSA:3.40.50.300 2 210 1.4E-78 T 14-10-2018 C3497_13550 a711604510918cb9a864efd32fd70629 234 Gene3D G3DSA:3.90.850.10 4 234 8.7E-81 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 C3497_13550 a711604510918cb9a864efd32fd70629 234 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 231 1.7E-49 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 C3497_13550 a711604510918cb9a864efd32fd70629 234 SUPERFAMILY SSF56529 23 232 1.16E-65 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 C3497_11410 2a826d9699f7e5886b5bdc992d10e1b4 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 355 55.533 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C3497_11410 2a826d9699f7e5886b5bdc992d10e1b4 356 SUPERFAMILY SSF53383 5 355 3.64E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_11410 2a826d9699f7e5886b5bdc992d10e1b4 356 Gene3D G3DSA:3.90.1150.10 20 343 1.2E-106 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_11410 2a826d9699f7e5886b5bdc992d10e1b4 356 Pfam PF00155 Aminotransferase class I and II 25 348 4.5E-57 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_11410 2a826d9699f7e5886b5bdc992d10e1b4 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 211 220 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 C3497_11410 2a826d9699f7e5886b5bdc992d10e1b4 356 Gene3D G3DSA:3.40.640.10 38 263 1.2E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_11410 2a826d9699f7e5886b5bdc992d10e1b4 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 353 8.2E-90 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C3497_01265 0fa17325b3d7adcef9f6d7bf4d3e4dc8 241 Gene3D G3DSA:1.10.10.200 1 80 6.3E-37 T 14-10-2018 IPR017856 Integrase-like, N-terminal C3497_01265 0fa17325b3d7adcef9f6d7bf4d3e4dc8 241 Gene3D G3DSA:3.30.70.980 130 205 7.3E-50 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01265 0fa17325b3d7adcef9f6d7bf4d3e4dc8 241 SUPERFAMILY SSF75625 3 237 9.03E-95 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01265 0fa17325b3d7adcef9f6d7bf4d3e4dc8 241 Gene3D G3DSA:3.30.70.980 86 235 7.3E-50 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01265 0fa17325b3d7adcef9f6d7bf4d3e4dc8 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.614 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01265 0fa17325b3d7adcef9f6d7bf4d3e4dc8 241 Pfam PF01709 Transcriptional regulator 5 236 6.9E-94 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01265 0fa17325b3d7adcef9f6d7bf4d3e4dc8 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.3E-92 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 SUPERFAMILY SSF48163 305 464 8.37E-39 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 311 3.0E-107 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 SUPERFAMILY SSF52374 5 303 7.78E-113 T 14-10-2018 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 462 1.7E-172 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 Gene3D G3DSA:3.40.50.620 4 320 3.1E-140 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 Gene3D G3DSA:1.10.10.350 374 465 3.3E-17 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 465 31.879 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 1.7E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 195 1.7E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 1.7E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 1.7E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_05055 1e58ec5cd5f785e26de386c491e4b496 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 201 209 1.7E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_03000 a3f37ed67616755c502277132f1704eb 333 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 332 46.387 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3497_03000 a3f37ed67616755c502277132f1704eb 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 204 231 1.3E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3497_03000 a3f37ed67616755c502277132f1704eb 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 1.3E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3497_03000 a3f37ed67616755c502277132f1704eb 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 178 201 1.3E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3497_03000 a3f37ed67616755c502277132f1704eb 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 306 331 1.3E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3497_03000 a3f37ed67616755c502277132f1704eb 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 147 170 1.3E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3497_03000 a3f37ed67616755c502277132f1704eb 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 1.3E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3497_03000 a3f37ed67616755c502277132f1704eb 333 SUPERFAMILY SSF56655 3 330 6.11E-115 T 14-10-2018 C3497_03000 a3f37ed67616755c502277132f1704eb 333 PIRSF PIRSF500210 1 333 1.0E-123 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3497_03000 a3f37ed67616755c502277132f1704eb 333 PIRSF PIRSF000904 1 333 1.4E-123 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3497_03000 a3f37ed67616755c502277132f1704eb 333 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 193 7.0E-64 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3497_03000 a3f37ed67616755c502277132f1704eb 333 Gene3D G3DSA:3.30.540.10 1 194 2.5E-72 T 14-10-2018 C3497_03000 a3f37ed67616755c502277132f1704eb 333 Gene3D G3DSA:3.40.190.80 195 332 1.9E-53 T 14-10-2018 C3497_04300 fd7c105e56335fc356b18348a23f9eba 176 Gene3D G3DSA:3.30.450.20 20 116 2.9E-17 T 14-10-2018 C3497_04300 fd7c105e56335fc356b18348a23f9eba 176 Pfam PF08447 PAS fold 31 108 4.1E-9 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3497_04300 fd7c105e56335fc356b18348a23f9eba 176 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 111 1.0E-6 T 14-10-2018 IPR000014 PAS domain C3497_04300 fd7c105e56335fc356b18348a23f9eba 176 SUPERFAMILY SSF55785 20 114 5.06E-21 T 14-10-2018 IPR035965 PAS domain superfamily C3497_02905 f0f33f42f75bd6b51567a2c9a1cabaf5 304 Gene3D G3DSA:3.40.190.290 97 299 8.2E-14 T 14-10-2018 C3497_02905 f0f33f42f75bd6b51567a2c9a1cabaf5 304 Pfam PF03466 LysR substrate binding domain 96 293 9.4E-18 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_02905 f0f33f42f75bd6b51567a2c9a1cabaf5 304 SUPERFAMILY SSF53850 95 293 2.71E-24 T 14-10-2018 C3497_02905 f0f33f42f75bd6b51567a2c9a1cabaf5 304 Gene3D G3DSA:1.10.10.10 6 96 4.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_02905 f0f33f42f75bd6b51567a2c9a1cabaf5 304 SUPERFAMILY SSF46785 4 89 1.63E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_02905 f0f33f42f75bd6b51567a2c9a1cabaf5 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 8.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_06475 f58e562f2804bde6df02601b44e7c84e 439 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_06475 f58e562f2804bde6df02601b44e7c84e 439 PIRSF PIRSF000521 29 437 4.7E-28 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_06475 f58e562f2804bde6df02601b44e7c84e 439 SUPERFAMILY SSF53383 11 436 1.0E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_06475 f58e562f2804bde6df02601b44e7c84e 439 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 434 1.9E-158 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 C3497_06475 f58e562f2804bde6df02601b44e7c84e 439 Gene3D G3DSA:3.40.640.10 64 340 7.8E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_06475 f58e562f2804bde6df02601b44e7c84e 439 Pfam PF00202 Aminotransferase class-III 25 431 4.3E-114 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_06475 f58e562f2804bde6df02601b44e7c84e 439 Gene3D G3DSA:3.90.1150.10 13 427 7.8E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_11580 3f103ece1b3701939bc860122cc09eba 132 Pfam PF11149 Protein of unknown function (DUF2924) 1 126 5.7E-45 T 14-10-2018 IPR021322 Protein of unknown function DUF2924 C3497_13635 f500a041169ceb8070871245d53434ed 168 SUPERFAMILY SSF142433 4 159 7.32E-54 T 14-10-2018 IPR036653 CinA-like, C-terminal C3497_13635 f500a041169ceb8070871245d53434ed 168 Pfam PF02464 Competence-damaged protein 7 157 1.1E-56 T 14-10-2018 IPR008136 CinA, C-terminal C3497_13635 f500a041169ceb8070871245d53434ed 168 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 156 5.4E-47 T 14-10-2018 IPR008136 CinA, C-terminal C3497_13635 f500a041169ceb8070871245d53434ed 168 Gene3D G3DSA:3.90.950.20 1 160 1.1E-58 T 14-10-2018 IPR036653 CinA-like, C-terminal C3497_07425 eb47ec37a4f676b10bb23024dd3bfec0 277 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 275 1.1E-125 T 14-10-2018 IPR017828 Squalene synthase HpnD-like GO:0016117|GO:0016767 C3497_07425 eb47ec37a4f676b10bb23024dd3bfec0 277 Pfam PF00494 Squalene/phytoene synthase 13 263 1.2E-82 T 14-10-2018 C3497_07425 eb47ec37a4f676b10bb23024dd3bfec0 277 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 152 177 - T 14-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 C3497_07425 eb47ec37a4f676b10bb23024dd3bfec0 277 Gene3D G3DSA:1.10.600.10 2 274 1.5E-89 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3497_07425 eb47ec37a4f676b10bb23024dd3bfec0 277 SUPERFAMILY SSF48576 3 276 9.46E-95 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3497_01695 bda87b3fac1c327eb72b82eaa3303afc 274 SUPERFAMILY SSF52540 22 271 1.2E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01695 bda87b3fac1c327eb72b82eaa3303afc 274 SMART SM00382 48 249 4.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_01695 bda87b3fac1c327eb72b82eaa3303afc 274 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 249 271 8.2E-11 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal C3497_01695 bda87b3fac1c327eb72b82eaa3303afc 274 Pfam PF00005 ABC transporter 39 200 3.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_01695 bda87b3fac1c327eb72b82eaa3303afc 274 Gene3D G3DSA:3.40.50.300 13 271 1.1E-61 T 14-10-2018 C3497_10185 462387378548f8fc32f914c1c47edf40 873 SUPERFAMILY SSF47323 671 873 4.49E-30 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10185 462387378548f8fc32f914c1c47edf40 873 SUPERFAMILY SSF52374 4 675 5.87E-154 T 14-10-2018 C3497_10185 462387378548f8fc32f914c1c47edf40 873 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 873 23.248 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3497_10185 462387378548f8fc32f914c1c47edf40 873 Gene3D G3DSA:3.10.20.590 812 873 4.2E-23 T 14-10-2018 C3497_10185 462387378548f8fc32f914c1c47edf40 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 532 554 9.1E-50 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3497_10185 462387378548f8fc32f914c1c47edf40 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 565 575 9.1E-50 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3497_10185 462387378548f8fc32f914c1c47edf40 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 494 512 9.1E-50 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3497_10185 462387378548f8fc32f914c1c47edf40 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 9.1E-50 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3497_10185 462387378548f8fc32f914c1c47edf40 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 9.1E-50 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3497_10185 462387378548f8fc32f914c1c47edf40 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 9.1E-50 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3497_10185 462387378548f8fc32f914c1c47edf40 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 9.1E-50 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3497_10185 462387378548f8fc32f914c1c47edf40 873 Gene3D G3DSA:1.10.730.10 9 803 0.0 T 14-10-2018 C3497_10185 462387378548f8fc32f914c1c47edf40 873 Pfam PF09334 tRNA synthetases class I (M) 39 171 9.3E-19 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10185 462387378548f8fc32f914c1c47edf40 873 Gene3D G3DSA:3.90.740.10 227 421 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3497_10185 462387378548f8fc32f914c1c47edf40 873 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 873 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3497_10185 462387378548f8fc32f914c1c47edf40 873 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 410 3.0E-69 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 C3497_10185 462387378548f8fc32f914c1c47edf40 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 627 667 4.1E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10185 462387378548f8fc32f914c1c47edf40 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 424 580 9.4E-9 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10185 462387378548f8fc32f914c1c47edf40 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10185 462387378548f8fc32f914c1c47edf40 873 Gene3D G3DSA:3.10.330.110 575 637 0.0 T 14-10-2018 C3497_10185 462387378548f8fc32f914c1c47edf40 873 Gene3D G3DSA:3.40.50.620 33 574 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_10185 462387378548f8fc32f914c1c47edf40 873 Pfam PF08264 Anticodon-binding domain of tRNA 715 836 1.3E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 C3497_10185 462387378548f8fc32f914c1c47edf40 873 SUPERFAMILY SSF50677 226 422 8.37E-52 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3497_14055 fa8022a6979743a33bf73d6652fa376e 305 SUPERFAMILY SSF46785 1 84 2.44E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_14055 fa8022a6979743a33bf73d6652fa376e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14055 fa8022a6979743a33bf73d6652fa376e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14055 fa8022a6979743a33bf73d6652fa376e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14055 fa8022a6979743a33bf73d6652fa376e 305 Pfam PF03466 LysR substrate binding domain 88 294 2.4E-43 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_14055 fa8022a6979743a33bf73d6652fa376e 305 SUPERFAMILY SSF53850 91 298 3.91E-40 T 14-10-2018 C3497_14055 fa8022a6979743a33bf73d6652fa376e 305 Gene3D G3DSA:3.40.190.10 91 288 7.1E-62 T 14-10-2018 C3497_14055 fa8022a6979743a33bf73d6652fa376e 305 Gene3D G3DSA:3.40.190.10 165 270 7.1E-62 T 14-10-2018 C3497_14055 fa8022a6979743a33bf73d6652fa376e 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.9E-25 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14055 fa8022a6979743a33bf73d6652fa376e 305 Gene3D G3DSA:1.10.10.10 1 90 1.1E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_05425 ff4196ee50aa4b9383de864a2a56bb52 218 Gene3D G3DSA:1.10.150.240 20 85 4.3E-55 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C3497_05425 ff4196ee50aa4b9383de864a2a56bb52 218 Gene3D G3DSA:3.40.50.1000 8 203 4.3E-55 T 14-10-2018 IPR023214 HAD superfamily C3497_05425 ff4196ee50aa4b9383de864a2a56bb52 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 184 6.5E-37 T 14-10-2018 C3497_05425 ff4196ee50aa4b9383de864a2a56bb52 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 122 179 4.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3497_05425 ff4196ee50aa4b9383de864a2a56bb52 218 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 79 185 8.2E-13 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 C3497_05425 ff4196ee50aa4b9383de864a2a56bb52 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 180 6.1E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3497_05425 ff4196ee50aa4b9383de864a2a56bb52 218 SUPERFAMILY SSF56784 5 215 3.02E-61 T 14-10-2018 IPR036412 HAD-like superfamily C3497_06815 a1136e319ef31827d09bef62334ed9f4 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C3497_06815 a1136e319ef31827d09bef62334ed9f4 273 Gene3D G3DSA:2.160.10.10 87 257 3.4E-57 T 14-10-2018 C3497_06815 a1136e319ef31827d09bef62334ed9f4 273 SUPERFAMILY SSF51161 2 256 9.98E-76 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3497_06815 a1136e319ef31827d09bef62334ed9f4 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 272 5.4E-146 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 C3497_06815 a1136e319ef31827d09bef62334ed9f4 273 Gene3D G3DSA:1.10.166.10 1 70 2.0E-30 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 C3497_06815 a1136e319ef31827d09bef62334ed9f4 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 69 1.4E-26 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 C3497_06815 a1136e319ef31827d09bef62334ed9f4 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0012 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_06815 a1136e319ef31827d09bef62334ed9f4 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.934 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 C3497_06815 a1136e319ef31827d09bef62334ed9f4 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.0E-12 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_00860 31c562492afa7d6289ca55907554c636 253 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_00860 31c562492afa7d6289ca55907554c636 253 SUPERFAMILY SSF52540 8 242 2.15E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00860 31c562492afa7d6289ca55907554c636 253 SMART SM00382 34 220 5.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00860 31c562492afa7d6289ca55907554c636 253 Pfam PF00005 ABC transporter 25 171 3.8E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_00860 31c562492afa7d6289ca55907554c636 253 Gene3D G3DSA:3.40.50.300 5 244 4.0E-56 T 14-10-2018 C3497_12350 095f3a2029c16f253cab9ca52777f880 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 15 143 3.7E-45 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 C3497_12350 095f3a2029c16f253cab9ca52777f880 147 Gene3D G3DSA:3.30.700.10 39 145 2.6E-33 T 14-10-2018 C3497_12350 095f3a2029c16f253cab9ca52777f880 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 36 3.5E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12350 095f3a2029c16f253cab9ca52777f880 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12350 095f3a2029c16f253cab9ca52777f880 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 16 41 1.9E-12 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3497_12350 095f3a2029c16f253cab9ca52777f880 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 52 70 1.9E-12 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3497_12350 095f3a2029c16f253cab9ca52777f880 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 36 5.2E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12350 095f3a2029c16f253cab9ca52777f880 147 Pfam PF08334 Type II secretion system (T2SS), protein G 39 144 4.5E-38 T 14-10-2018 IPR013545 Type II secretion system protein G C3497_12350 095f3a2029c16f253cab9ca52777f880 147 SUPERFAMILY SSF54523 42 143 3.82E-31 T 14-10-2018 C3497_08465 b0ca5b4a1c49a5bda1ef3d3aeb5f865c 294 Gene3D G3DSA:1.10.40.50 224 293 2.2E-22 T 14-10-2018 C3497_08465 b0ca5b4a1c49a5bda1ef3d3aeb5f865c 294 SUPERFAMILY SSF50249 2 58 5.4E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_08465 b0ca5b4a1c49a5bda1ef3d3aeb5f865c 294 Gene3D G3DSA:3.40.50.300 58 223 6.8E-39 T 14-10-2018 C3497_08465 b0ca5b4a1c49a5bda1ef3d3aeb5f865c 294 SUPERFAMILY SSF52540 70 286 1.49E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_08465 b0ca5b4a1c49a5bda1ef3d3aeb5f865c 294 Gene3D G3DSA:2.40.50.140 1 56 2.7E-5 T 14-10-2018 C3497_08465 b0ca5b4a1c49a5bda1ef3d3aeb5f865c 294 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 1 288 33.959 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 C3497_08465 b0ca5b4a1c49a5bda1ef3d3aeb5f865c 294 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 35 280 4.3E-65 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 C3497_08465 b0ca5b4a1c49a5bda1ef3d3aeb5f865c 294 Pfam PF03193 RsgA GTPase 55 223 3.0E-48 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 C3497_11800 fb622cae9433e12b3711a75ef532855c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 C3497_11800 fb622cae9433e12b3711a75ef532855c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 C3497_11800 fb622cae9433e12b3711a75ef532855c 112 PRINTS PR00340 P-II protein signature 23 41 1.5E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_11800 fb622cae9433e12b3711a75ef532855c 112 PRINTS PR00340 P-II protein signature 52 75 1.5E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_11800 fb622cae9433e12b3711a75ef532855c 112 PRINTS PR00340 P-II protein signature 2 17 1.5E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_11800 fb622cae9433e12b3711a75ef532855c 112 PRINTS PR00340 P-II protein signature 83 103 1.5E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_11800 fb622cae9433e12b3711a75ef532855c 112 Gene3D G3DSA:3.30.70.120 1 112 8.1E-49 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C3497_11800 fb622cae9433e12b3711a75ef532855c 112 PIRSF PIRSF039144 1 112 6.6E-57 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_11800 fb622cae9433e12b3711a75ef532855c 112 SUPERFAMILY SSF54913 1 112 1.53E-47 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C3497_11800 fb622cae9433e12b3711a75ef532855c 112 SMART SM00938 4 105 2.1E-68 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_11800 fb622cae9433e12b3711a75ef532855c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.8E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 SUPERFAMILY SSF140490 320 418 5.36E-37 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 337 348 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 Gene3D G3DSA:3.10.20.600 227 321 2.2E-37 T 14-10-2018 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 44 214 3.4E-45 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 Gene3D G3DSA:1.20.1440.230 322 423 1.9E-32 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 7 410 1.5E-193 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 SUPERFAMILY SSF142984 236 319 2.75E-28 T 14-10-2018 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 Pfam PF10531 SLBB domain 238 286 5.9E-15 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 SUPERFAMILY SSF142019 6 234 5.75E-81 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 326 409 6.6E-29 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 Gene3D G3DSA:3.40.50.11540 48 225 1.4E-76 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04415 f35fb72083c505a22be00912fa4b0c27 434 SMART SM00928 324 369 2.6E-24 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_08480 cf428454ac495b23bdec92d667e43398 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 1.7E-128 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3497_08480 cf428454ac495b23bdec92d667e43398 393 Pfam PF02803 Thiolase, C-terminal domain 271 392 7.5E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3497_08480 cf428454ac495b23bdec92d667e43398 393 PIRSF PIRSF000429 1 393 1.6E-119 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3497_08480 cf428454ac495b23bdec92d667e43398 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3497_08480 cf428454ac495b23bdec92d667e43398 393 Gene3D G3DSA:3.40.47.10 8 276 6.3E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_08480 cf428454ac495b23bdec92d667e43398 393 SUPERFAMILY SSF53901 5 266 4.2E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_08480 cf428454ac495b23bdec92d667e43398 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 C3497_08480 cf428454ac495b23bdec92d667e43398 393 Pfam PF00108 Thiolase, N-terminal domain 6 262 6.3E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3497_08480 cf428454ac495b23bdec92d667e43398 393 SUPERFAMILY SSF53901 271 392 2.1E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_08480 cf428454ac495b23bdec92d667e43398 393 Gene3D G3DSA:3.40.47.10 129 389 6.3E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_08480 cf428454ac495b23bdec92d667e43398 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 C3497_02875 0d49d0ca2df846a9cdb8e5ece474f20d 305 Gene3D G3DSA:1.10.3720.10 109 300 1.0E-23 T 14-10-2018 IPR035906 MetI-like superfamily C3497_02875 0d49d0ca2df846a9cdb8e5ece474f20d 305 SUPERFAMILY SSF161098 111 291 2.22E-27 T 14-10-2018 IPR035906 MetI-like superfamily C3497_02875 0d49d0ca2df846a9cdb8e5ece474f20d 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 289 1.3E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_02875 0d49d0ca2df846a9cdb8e5ece474f20d 305 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 96 291 8.7E-71 T 14-10-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 Gene3D G3DSA:3.40.50.880 157 379 5.0E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 5 380 48.665 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 SUPERFAMILY SSF52317 160 377 3.06E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 Pfam PF00117 Glutamine amidotransferase class-I 199 374 7.5E-46 T 14-10-2018 IPR017926 Glutamine amidotransferase C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 Gene3D G3DSA:3.50.30.20 5 156 5.8E-57 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 266 282 2.0E-40 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 308 319 2.0E-40 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 196 210 2.0E-40 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 235 249 2.0E-40 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 300 2.0E-40 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 SUPERFAMILY SSF52021 6 141 1.7E-56 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 266 277 1.5E-10 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 238 247 1.5E-10 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 351 364 1.5E-10 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 SMART SM01097 5 135 2.1E-91 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00097 Anthranilate synthase component II signature 266 277 5.7E-5 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00097 Anthranilate synthase component II signature 238 247 5.7E-5 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 PRINTS PR00097 Anthranilate synthase component II signature 351 364 5.7E-5 T 14-10-2018 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 7 134 4.4E-52 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04230 07cf776e695ab146d0c481e5b9ed2aaa 380 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 7 377 2.5E-144 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04380 e1df2290ef559802f608bea6e603f2d6 120 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 7 77 2.8E-27 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3497_04380 e1df2290ef559802f608bea6e603f2d6 120 Pfam PF03840 Preprotein translocase SecG subunit 9 77 6.5E-23 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3497_04380 e1df2290ef559802f608bea6e603f2d6 120 PRINTS PR01651 Protein-export SecG membrane protein signature 7 27 1.1E-37 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3497_04380 e1df2290ef559802f608bea6e603f2d6 120 PRINTS PR01651 Protein-export SecG membrane protein signature 42 58 1.1E-37 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3497_04380 e1df2290ef559802f608bea6e603f2d6 120 PRINTS PR01651 Protein-export SecG membrane protein signature 58 80 1.1E-37 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3497_04380 e1df2290ef559802f608bea6e603f2d6 120 PRINTS PR01651 Protein-export SecG membrane protein signature 27 41 1.1E-37 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3497_13985 ee90dbc4fcf42ac15f274954578298b1 760 Gene3D G3DSA:3.40.50.2000 516 725 6.8E-145 T 14-10-2018 C3497_13985 ee90dbc4fcf42ac15f274954578298b1 760 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 2 233 4.1E-58 T 14-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal C3497_13985 ee90dbc4fcf42ac15f274954578298b1 760 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 2 190 4.6E-14 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 C3497_13985 ee90dbc4fcf42ac15f274954578298b1 760 SUPERFAMILY SSF56784 2 205 8.57E-32 T 14-10-2018 IPR036412 HAD-like superfamily C3497_13985 ee90dbc4fcf42ac15f274954578298b1 760 Gene3D G3DSA:3.90.1070.10 88 152 1.3E-59 T 14-10-2018 C3497_13985 ee90dbc4fcf42ac15f274954578298b1 760 SUPERFAMILY SSF53756 253 739 1.19E-127 T 14-10-2018 C3497_13985 ee90dbc4fcf42ac15f274954578298b1 760 Pfam PF00982 Glycosyltransferase family 20 253 739 2.7E-130 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 C3497_13985 ee90dbc4fcf42ac15f274954578298b1 760 Gene3D G3DSA:3.40.50.2000 280 736 6.8E-145 T 14-10-2018 C3497_13985 ee90dbc4fcf42ac15f274954578298b1 760 Gene3D G3DSA:3.40.50.1000 2 230 1.3E-59 T 14-10-2018 IPR023214 HAD superfamily C3497_13985 ee90dbc4fcf42ac15f274954578298b1 760 TIGRFAM TIGR02398 gluc_glyc_Psyn: glucosylglycerol-phosphate synthase 257 741 5.7E-223 T 14-10-2018 IPR012764 Glucosylglycerol-phosphate synthase GO:0016758|GO:0051473 MetaCyc: PWY-7902 C3497_01180 9d33d8f5920f1b4d85f30def4bdb84c0 140 Pfam PF09086 Domain of unknown function (DUF1924) 44 137 3.7E-35 T 14-10-2018 IPR015170 Protein of unknown function DUF1924 C3497_01180 9d33d8f5920f1b4d85f30def4bdb84c0 140 Gene3D G3DSA:1.10.760.10 24 140 1.3E-42 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_01180 9d33d8f5920f1b4d85f30def4bdb84c0 140 SUPERFAMILY SSF46626 32 138 5.13E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_06205 0d18cfb8aeb546a74c04b034fba46aaf 495 Gene3D G3DSA:3.40.50.1980 24 177 6.3E-54 T 14-10-2018 C3497_06205 0d18cfb8aeb546a74c04b034fba46aaf 495 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 37 442 5.7E-108 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 C3497_06205 0d18cfb8aeb546a74c04b034fba46aaf 495 SUPERFAMILY SSF53807 6 454 3.08E-140 T 14-10-2018 C3497_06205 0d18cfb8aeb546a74c04b034fba46aaf 495 Gene3D G3DSA:3.40.50.12380 178 450 3.8E-112 T 14-10-2018 C3497_06205 0d18cfb8aeb546a74c04b034fba46aaf 495 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 55 62 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C3497_06205 0d18cfb8aeb546a74c04b034fba46aaf 495 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 4 456 3.6E-208 T 14-10-2018 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0009399|GO:0065003 C3497_06205 0d18cfb8aeb546a74c04b034fba46aaf 495 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 122 136 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C3497_02795 dc8576fb4a9afde662e2529ba9241f37 214 SUPERFAMILY SSF48452 95 190 2.98E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_02795 dc8576fb4a9afde662e2529ba9241f37 214 Pfam PF09976 Tetratricopeptide repeat-like domain 16 213 2.1E-64 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 C3497_02795 dc8576fb4a9afde662e2529ba9241f37 214 Gene3D G3DSA:1.25.40.10 40 193 1.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_02795 dc8576fb4a9afde662e2529ba9241f37 214 PIRSF PIRSF006170 2 214 1.4E-56 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 C3497_02530 70d727d70a53f59133a83caf3a547021 212 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 7 189 1.2E-58 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 C3497_02530 70d727d70a53f59133a83caf3a547021 212 SUPERFAMILY SSF53178 7 189 7.32E-66 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 C3497_02530 70d727d70a53f59133a83caf3a547021 212 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 6 182 34.064 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 C3497_02530 70d727d70a53f59133a83caf3a547021 212 Pfam PF01195 Peptidyl-tRNA hydrolase 8 188 3.1E-56 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 C3497_02530 70d727d70a53f59133a83caf3a547021 212 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 C3497_02530 70d727d70a53f59133a83caf3a547021 212 Gene3D G3DSA:3.40.50.1470 4 193 1.9E-66 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 C3497_04150 82ddf11e4aa42d01c9a0d8964ceb9ca3 372 SUPERFAMILY SSF48452 31 153 3.04E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04150 82ddf11e4aa42d01c9a0d8964ceb9ca3 372 Pfam PF07719 Tetratricopeptide repeat 94 125 6.0E-6 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 C3497_04150 82ddf11e4aa42d01c9a0d8964ceb9ca3 372 Pfam PF13432 Tetratricopeptide repeat 30 93 8.1E-10 T 14-10-2018 C3497_04150 82ddf11e4aa42d01c9a0d8964ceb9ca3 372 SUPERFAMILY SSF54427 263 368 8.13E-16 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3497_04150 82ddf11e4aa42d01c9a0d8964ceb9ca3 372 SMART SM00028 59 92 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04150 82ddf11e4aa42d01c9a0d8964ceb9ca3 372 SMART SM00028 93 126 4.4E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04150 82ddf11e4aa42d01c9a0d8964ceb9ca3 372 SMART SM00028 127 155 360.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04150 82ddf11e4aa42d01c9a0d8964ceb9ca3 372 Gene3D G3DSA:1.25.40.10 16 171 8.1E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04150 82ddf11e4aa42d01c9a0d8964ceb9ca3 372 Gene3D G3DSA:3.10.450.50 257 371 3.6E-13 T 14-10-2018 C3497_04150 82ddf11e4aa42d01c9a0d8964ceb9ca3 372 Pfam PF14534 Domain of unknown function (DUF4440) 265 365 3.5E-7 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 C3497_04955 c195b44fb7c2ff1948ee7e5195296355 480 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 111 339 6.1E-11 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3497_04955 c195b44fb7c2ff1948ee7e5195296355 480 Gene3D G3DSA:3.90.1380.10 1 94 6.2E-33 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily C3497_04955 c195b44fb7c2ff1948ee7e5195296355 480 Pfam PF14821 Threonine synthase N terminus 2 79 9.5E-31 T 14-10-2018 IPR029144 Threonine synthase, N-terminal C3497_04955 c195b44fb7c2ff1948ee7e5195296355 480 Gene3D G3DSA:3.40.50.1100 109 447 8.2E-136 T 14-10-2018 C3497_04955 c195b44fb7c2ff1948ee7e5195296355 480 SUPERFAMILY SSF53686 2 479 3.17E-152 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3497_04955 c195b44fb7c2ff1948ee7e5195296355 480 TIGRFAM TIGR00260 thrC: threonine synthase 105 441 1.6E-67 T 14-10-2018 IPR004450 Threonine synthase-like C3497_04955 c195b44fb7c2ff1948ee7e5195296355 480 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 111 125 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 C3497_04955 c195b44fb7c2ff1948ee7e5195296355 480 Gene3D G3DSA:3.40.50.1100 117 460 8.2E-136 T 14-10-2018 C3497_06580 ee837479ecb32143012d8479c872ac7d 259 SMART SM00382 31 227 8.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_06580 ee837479ecb32143012d8479c872ac7d 259 Gene3D G3DSA:3.40.50.300 7 251 9.0E-68 T 14-10-2018 C3497_06580 ee837479ecb32143012d8479c872ac7d 259 SUPERFAMILY SSF52540 7 233 3.86E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06580 ee837479ecb32143012d8479c872ac7d 259 Pfam PF00005 ABC transporter 23 172 5.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 Gene3D G3DSA:3.30.54.20 130 186 2.1E-65 T 14-10-2018 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 529 1.9E-43 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 SUPERFAMILY SSF55681 242 526 1.67E-98 T 14-10-2018 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 SMART SM00863 169 218 3.3E-26 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.9E-222 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 Pfam PF02824 TGS domain 4 61 6.2E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 SUPERFAMILY SSF55186 65 240 1.44E-68 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 Gene3D G3DSA:3.40.50.800 532 636 3.4E-28 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.238 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.2E-50 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.2E-50 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.2E-50 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.2E-50 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.2E-50 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 Gene3D G3DSA:3.10.20.30 3 63 3.1E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 SUPERFAMILY SSF81271 3 61 1.63E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 Pfam PF03129 Anticodon binding domain 541 626 2.0E-19 T 14-10-2018 IPR004154 Anticodon-binding C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 Gene3D G3DSA:3.30.980.10 69 221 2.1E-65 T 14-10-2018 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 Gene3D G3DSA:3.30.930.10 222 531 5.5E-127 T 14-10-2018 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 SUPERFAMILY SSF52954 529 633 6.34E-28 T 14-10-2018 C3497_09505 16209ca5c95fd0fee6043063ca116a01 639 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 7.6E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C3497_00625 e796e476a35e6f910c381c10bcd680f5 576 SUPERFAMILY SSF52096 296 556 3.03E-34 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_00625 e796e476a35e6f910c381c10bcd680f5 576 Gene3D G3DSA:3.10.25.10 180 265 2.1E-7 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_00625 e796e476a35e6f910c381c10bcd680f5 576 Gene3D G3DSA:3.40.50.170 17 169 2.0E-16 T 14-10-2018 C3497_00625 e796e476a35e6f910c381c10bcd680f5 576 SUPERFAMILY SSF53328 4 160 1.57E-21 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_00625 e796e476a35e6f910c381c10bcd680f5 576 PIRSF PIRSF006787 1 575 7.0E-240 T 14-10-2018 IPR009188 [NiFe]-hydrogenase maturation factor, HypX/HoxX type C3497_00625 e796e476a35e6f910c381c10bcd680f5 576 Pfam PF00551 Formyl transferase 39 132 3.9E-8 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_00625 e796e476a35e6f910c381c10bcd680f5 576 SUPERFAMILY SSF50486 179 263 6.47E-13 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 C3497_00625 e796e476a35e6f910c381c10bcd680f5 576 Gene3D G3DSA:3.90.226.10 313 542 3.8E-31 T 14-10-2018 C3497_00625 e796e476a35e6f910c381c10bcd680f5 576 Pfam PF00378 Enoyl-CoA hydratase/isomerase 323 524 9.2E-18 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3497_00625 e796e476a35e6f910c381c10bcd680f5 576 Pfam PF02911 Formyl transferase, C-terminal domain 178 263 5.6E-11 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 Gene3D G3DSA:2.40.10.120 47 281 2.4E-80 T 14-10-2018 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 SUPERFAMILY SSF50156 245 369 2.23E-28 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 49 480 9.6E-151 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 SMART SM00228 287 369 3.9E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 SMART SM00228 399 475 1.9E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 Pfam PF13365 Trypsin-like peptidase domain 114 248 2.3E-34 T 14-10-2018 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 SUPERFAMILY SSF50494 46 279 2.61E-68 T 14-10-2018 IPR009003 Peptidase S1, PA clan C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 Gene3D G3DSA:2.30.42.10 282 384 4.5E-29 T 14-10-2018 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 Gene3D G3DSA:2.30.42.10 404 484 1.1E-18 T 14-10-2018 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 SUPERFAMILY SSF50156 399 484 3.29E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 PRINTS PR00834 HtrA/DegQ protease family signature 327 339 1.0E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 PRINTS PR00834 HtrA/DegQ protease family signature 123 135 1.0E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 1.0E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 1.0E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 PRINTS PR00834 HtrA/DegQ protease family signature 185 209 1.0E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 1.0E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 Pfam PF13180 PDZ domain 402 477 1.8E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_14510 74b889a33ef34773e6b2e6d3bb5f2944 485 Pfam PF13180 PDZ domain 288 375 1.2E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_10400 547fef882dec0704691ad54427907376 392 Gene3D G3DSA:3.40.50.2000 171 345 4.5E-32 T 14-10-2018 C3497_10400 547fef882dec0704691ad54427907376 392 Pfam PF00534 Glycosyl transferases group 1 181 322 4.2E-18 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3497_10400 547fef882dec0704691ad54427907376 392 SUPERFAMILY SSF53756 2 361 2.04E-43 T 14-10-2018 C3497_10400 547fef882dec0704691ad54427907376 392 Gene3D G3DSA:3.40.50.2000 86 358 4.5E-32 T 14-10-2018 C3497_04085 9c31c529d01c027eafecbdec3fa2051f 207 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 199 3.6E-46 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 C3497_04085 9c31c529d01c027eafecbdec3fa2051f 207 SUPERFAMILY SSF51366 4 202 5.02E-62 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3497_04085 9c31c529d01c027eafecbdec3fa2051f 207 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 205 41.352 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 C3497_04085 9c31c529d01c027eafecbdec3fa2051f 207 Gene3D G3DSA:3.20.20.70 2 206 4.7E-65 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_08025 a3791de83f78e99da063595273d97539 458 SUPERFAMILY SSF89796 204 402 3.66E-56 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily C3497_08025 a3791de83f78e99da063595273d97539 458 Gene3D G3DSA:3.40.50.10540 202 411 9.4E-58 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily C3497_08025 a3791de83f78e99da063595273d97539 458 SUPERFAMILY SSF89796 28 200 7.06E-25 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily C3497_08025 a3791de83f78e99da063595273d97539 458 Pfam PF02515 CoA-transferase family III 206 397 1.9E-48 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 C3497_05485 adab4a08594923cc547dafdf9d126489 525 SUPERFAMILY SSF51905 3 440 7.69E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_05485 adab4a08594923cc547dafdf9d126489 525 SUPERFAMILY SSF56425 232 347 2.39E-43 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_05485 adab4a08594923cc547dafdf9d126489 525 Gene3D G3DSA:3.90.700.10 242 352 1.9E-160 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_05485 adab4a08594923cc547dafdf9d126489 525 Pfam PF02910 Fumarate reductase flavoprotein C-term 434 513 2.1E-12 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_05485 adab4a08594923cc547dafdf9d126489 525 Gene3D G3DSA:3.50.50.60 6 398 1.9E-160 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_05485 adab4a08594923cc547dafdf9d126489 525 Pfam PF00890 FAD binding domain 6 386 6.3E-105 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_05485 adab4a08594923cc547dafdf9d126489 525 Gene3D G3DSA:1.20.58.100 417 525 3.4E-40 T 14-10-2018 C3497_05485 adab4a08594923cc547dafdf9d126489 525 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 4 512 3.1E-196 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 C3497_05485 adab4a08594923cc547dafdf9d126489 525 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 7.2E-9 T 14-10-2018 C3497_05485 adab4a08594923cc547dafdf9d126489 525 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 371 7.2E-9 T 14-10-2018 C3497_05485 adab4a08594923cc547dafdf9d126489 525 SUPERFAMILY SSF46977 417 519 1.15E-29 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_08405 d8e0645bb37542c8166b5a94f429918d 280 SUPERFAMILY SSF52540 7 247 1.03E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_08405 d8e0645bb37542c8166b5a94f429918d 280 Gene3D G3DSA:3.40.50.300 11 190 5.6E-27 T 14-10-2018 C3497_08405 d8e0645bb37542c8166b5a94f429918d 280 SMART SM00382 25 183 2.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_08405 d8e0645bb37542c8166b5a94f429918d 280 Pfam PF07728 AAA domain (dynein-related subfamily) 29 171 1.5E-13 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 C3497_11695 160174a8cf636a4f473ee849d3d39d29 381 Gene3D G3DSA:3.40.640.10 38 270 2.7E-120 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_11695 160174a8cf636a4f473ee849d3d39d29 381 SUPERFAMILY SSF53383 10 375 1.05E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_11695 160174a8cf636a4f473ee849d3d39d29 381 PIRSF PIRSF000524 18 381 4.6E-41 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 C3497_11695 160174a8cf636a4f473ee849d3d39d29 381 Gene3D G3DSA:3.90.1150.10 271 370 2.7E-120 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_11695 160174a8cf636a4f473ee849d3d39d29 381 Pfam PF00266 Aminotransferase class-V 22 297 9.6E-9 T 14-10-2018 IPR000192 Aminotransferase class V domain C3497_00175 752a77ddb1f84ca82f13b1ed8e23d132 135 SUPERFAMILY SSF54637 18 134 2.75E-34 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_00175 752a77ddb1f84ca82f13b1ed8e23d132 135 Pfam PF03061 Thioesterase superfamily 32 104 6.9E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3497_00175 752a77ddb1f84ca82f13b1ed8e23d132 135 Gene3D G3DSA:3.10.129.10 8 135 2.5E-36 T 14-10-2018 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 5.7E-10 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 5.7E-10 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 187 200 5.7E-10 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 274 293 5.7E-10 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 38 284 8.9E-40 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 Gene3D G3DSA:2.40.37.10 27 401 4.1E-105 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 222 239 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 379 6.5E-16 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 SUPERFAMILY SSF51419 27 286 1.64E-65 T 14-10-2018 IPR029066 PLP-binding barrel C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 TIGRFAM TIGR03099 dCO2ase_PEP1: pyridoxal-dependent decarboxylase, exosortase A system-associated 4 401 2.0E-197 T 14-10-2018 IPR017530 Pyridoxal-dependent decarboxylase, exosortase system type 1 associated C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 Gene3D G3DSA:3.20.20.10 35 286 4.1E-105 T 14-10-2018 IPR029066 PLP-binding barrel C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 SUPERFAMILY SSF50621 263 401 3.35E-35 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 PRINTS PR01182 Ornithine decarboxylase signature 99 123 7.3E-6 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 PRINTS PR01182 Ornithine decarboxylase signature 346 356 7.3E-6 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 C3497_10375 c09e94a34cc24f928c0c9ba2110df8c8 401 PRINTS PR01182 Ornithine decarboxylase signature 55 82 7.3E-6 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 C3497_04545 5c36b647fff77eb245ece53e239acf84 642 PRINTS PR00775 90kDa heat shock protein signature 197 215 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3497_04545 5c36b647fff77eb245ece53e239acf84 642 PRINTS PR00775 90kDa heat shock protein signature 96 113 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3497_04545 5c36b647fff77eb245ece53e239acf84 642 PRINTS PR00775 90kDa heat shock protein signature 29 51 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3497_04545 5c36b647fff77eb245ece53e239acf84 642 PRINTS PR00775 90kDa heat shock protein signature 8 28 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3497_04545 5c36b647fff77eb245ece53e239acf84 642 PRINTS PR00775 90kDa heat shock protein signature 78 95 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3497_04545 5c36b647fff77eb245ece53e239acf84 642 PRINTS PR00775 90kDa heat shock protein signature 123 145 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3497_04545 5c36b647fff77eb245ece53e239acf84 642 PRINTS PR00775 90kDa heat shock protein signature 179 196 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3497_04545 5c36b647fff77eb245ece53e239acf84 642 SUPERFAMILY SSF54211 241 500 2.88E-98 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_04545 5c36b647fff77eb245ece53e239acf84 642 Gene3D G3DSA:1.20.120.790 507 638 1.1E-45 T 14-10-2018 IPR037196 HSP90, C-terminal domain C3497_04545 5c36b647fff77eb245ece53e239acf84 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 189 7.7E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_04545 5c36b647fff77eb245ece53e239acf84 642 Gene3D G3DSA:3.40.50.11260 412 501 4.0E-33 T 14-10-2018 C3497_04545 5c36b647fff77eb245ece53e239acf84 642 PIRSF PIRSF002583 1 642 1.7E-212 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 C3497_04545 5c36b647fff77eb245ece53e239acf84 642 SUPERFAMILY SSF55874 8 223 3.01E-65 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_04545 5c36b647fff77eb245ece53e239acf84 642 Gene3D G3DSA:3.30.230.80 240 411 6.2E-68 T 14-10-2018 C3497_04545 5c36b647fff77eb245ece53e239acf84 642 SUPERFAMILY SSF110942 526 637 1.57E-37 T 14-10-2018 IPR037196 HSP90, C-terminal domain C3497_04545 5c36b647fff77eb245ece53e239acf84 642 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 C3497_04545 5c36b647fff77eb245ece53e239acf84 642 Gene3D G3DSA:3.30.565.10 1 235 2.1E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_04545 5c36b647fff77eb245ece53e239acf84 642 Pfam PF00183 Hsp90 protein 221 637 4.6E-133 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 C3497_04545 5c36b647fff77eb245ece53e239acf84 642 SMART SM00387 30 191 2.0E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_04545 5c36b647fff77eb245ece53e239acf84 642 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 637 32.697 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 C3497_03590 2b3198d019a0c8378d9203c521b9ced4 150 Gene3D G3DSA:3.10.420.10 1 150 6.2E-58 T 14-10-2018 IPR035958 SecB-like superfamily C3497_03590 2b3198d019a0c8378d9203c521b9ced4 150 Pfam PF02556 Preprotein translocase subunit SecB 3 142 1.1E-56 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3497_03590 2b3198d019a0c8378d9203c521b9ced4 150 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 11 28 1.8E-33 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3497_03590 2b3198d019a0c8378d9203c521b9ced4 150 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 96 118 1.8E-33 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3497_03590 2b3198d019a0c8378d9203c521b9ced4 150 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 122 140 1.8E-33 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3497_03590 2b3198d019a0c8378d9203c521b9ced4 150 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 72 92 1.8E-33 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3497_03590 2b3198d019a0c8378d9203c521b9ced4 150 SUPERFAMILY SSF54611 3 141 5.89E-52 T 14-10-2018 IPR035958 SecB-like superfamily C3497_03590 2b3198d019a0c8378d9203c521b9ced4 150 Hamap MF_00821 Protein-export protein SecB [secB]. 1 144 32.873 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3497_03590 2b3198d019a0c8378d9203c521b9ced4 150 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 3 141 2.7E-54 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3497_06365 fc87f9d56e5f3f35ceacc8297e7d9d55 1103 Gene3D G3DSA:3.10.620.30 112 280 3.2E-27 T 14-10-2018 C3497_06365 fc87f9d56e5f3f35ceacc8297e7d9d55 1103 Pfam PF01841 Transglutaminase-like superfamily 137 246 1.1E-18 T 14-10-2018 IPR002931 Transglutaminase-like C3497_06365 fc87f9d56e5f3f35ceacc8297e7d9d55 1103 SUPERFAMILY SSF54001 8 337 7.43E-75 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily C3497_06365 fc87f9d56e5f3f35ceacc8297e7d9d55 1103 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 84 1.3E-27 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal C3497_06365 fc87f9d56e5f3f35ceacc8297e7d9d55 1103 SMART SM00460 172 248 9.8E-23 T 14-10-2018 IPR002931 Transglutaminase-like C3497_06365 fc87f9d56e5f3f35ceacc8297e7d9d55 1103 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1101 0.0 T 14-10-2018 IPR018667 Domain of unknown function DUF2126 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 SMART SM00304 185 238 7.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 SUPERFAMILY SSF47384 222 306 3.53E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 305 3.1E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 SUPERFAMILY SSF55874 294 457 8.12E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 Gene3D G3DSA:1.10.287.130 189 306 4.9E-23 T 14-10-2018 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 8.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 8.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 8.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 8.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 456 2.6E-148 T 14-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 SMART SM00388 239 305 3.9E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 457 8.5E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 Gene3D G3DSA:3.30.565.10 310 460 4.0E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 Pfam PF00672 HAMP domain 188 234 1.5E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_11725 cbf43a589769ed5c469cd38a0aedab66 466 SMART SM00387 348 459 1.9E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 Gene3D G3DSA:3.20.20.70 455 798 1.5E-123 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 Gene3D G3DSA:2.160.20.60 1257 1556 4.1E-113 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 SUPERFAMILY SSF69336 1254 1545 5.62E-97 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 Pfam PF01493 GXGXG motif 1285 1469 2.0E-83 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 Pfam PF01645 Conserved region in glutamate synthase 815 1205 2.1E-158 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 SUPERFAMILY SSF51395 467 1251 7.33E-267 T 14-10-2018 C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 Gene3D G3DSA:3.60.20.10 19 453 2.1E-185 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 Gene3D G3DSA:3.20.20.70 799 1256 5.7E-209 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 SUPERFAMILY SSF56235 19 444 1.64E-156 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 Pfam PF00310 Glutamine amidotransferases class-II 19 442 2.7E-188 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain C3497_00380 81ccbd261e82f404daeadf2c22684854 1557 Pfam PF04898 Glutamate synthase central domain 471 754 7.6E-113 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 263 271 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 1.6E-37 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 5.6E-79 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 5.6E-79 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 5.6E-79 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 242 258 5.6E-79 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 5.6E-79 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 5.6E-79 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 259 277 5.6E-79 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 SUPERFAMILY SSF53223 1 121 1.25E-36 T 14-10-2018 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 285 2.9E-72 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 Gene3D G3DSA:3.40.50.720 6 262 3.2E-112 T 14-10-2018 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 SUPERFAMILY SSF51735 122 284 6.74E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 286 39.194 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3497_11635 c7a282614a0b1171e71a485e0bbfd54b 291 Gene3D G3DSA:3.40.50.10860 8 279 3.2E-112 T 14-10-2018 C3497_05160 49c60a38f2b40ca6a5d62c2117e2e3b6 308 Gene3D G3DSA:3.40.50.1820 28 303 1.2E-78 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_05160 49c60a38f2b40ca6a5d62c2117e2e3b6 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 77 92 5.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_05160 49c60a38f2b40ca6a5d62c2117e2e3b6 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 5.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_05160 49c60a38f2b40ca6a5d62c2117e2e3b6 308 Pfam PF12697 Alpha/beta hydrolase family 54 294 1.0E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_05160 49c60a38f2b40ca6a5d62c2117e2e3b6 308 SUPERFAMILY SSF53474 37 302 2.08E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_01635 8cb21ef2113a0a26948b7a32279196b3 721 SUPERFAMILY SSF51703 9 551 1.08E-230 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 C3497_01635 8cb21ef2113a0a26948b7a32279196b3 721 Pfam PF02310 B12 binding domain 591 701 9.4E-14 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 C3497_01635 8cb21ef2113a0a26948b7a32279196b3 721 Gene3D G3DSA:3.40.50.280 573 721 2.5E-50 T 14-10-2018 C3497_01635 8cb21ef2113a0a26948b7a32279196b3 721 SUPERFAMILY SSF52242 557 715 3.01E-56 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 C3497_01635 8cb21ef2113a0a26948b7a32279196b3 721 Pfam PF01642 Methylmalonyl-CoA mutase 37 549 1.6E-243 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 C3497_01635 8cb21ef2113a0a26948b7a32279196b3 721 Gene3D G3DSA:3.20.20.240 3 568 3.3E-249 T 14-10-2018 C3497_01635 8cb21ef2113a0a26948b7a32279196b3 721 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 35 556 1.5E-272 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 C3497_01635 8cb21ef2113a0a26948b7a32279196b3 721 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 588 718 9.1E-58 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 C3497_14340 0fbf751099d0376fcc0596dd30441f66 723 SMART SM00490 485 582 2.2E-6 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_14340 0fbf751099d0376fcc0596dd30441f66 723 SMART SM00487 188 388 8.3E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_14340 0fbf751099d0376fcc0596dd30441f66 723 TIGRFAM TIGR00595 priA: primosomal protein N' 213 721 4.7E-176 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 C3497_14340 0fbf751099d0376fcc0596dd30441f66 723 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 723 23.395 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 C3497_14340 0fbf751099d0376fcc0596dd30441f66 723 Pfam PF00271 Helicase conserved C-terminal domain 498 581 1.0E-5 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_14340 0fbf751099d0376fcc0596dd30441f66 723 Gene3D G3DSA:3.40.50.300 181 372 2.6E-71 T 14-10-2018 C3497_14340 0fbf751099d0376fcc0596dd30441f66 723 SUPERFAMILY SSF52540 212 614 1.78E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14340 0fbf751099d0376fcc0596dd30441f66 723 Gene3D G3DSA:1.10.8.630 2 110 1.1E-26 T 14-10-2018 C3497_14340 0fbf751099d0376fcc0596dd30441f66 723 Pfam PF00270 DEAD/DEAH box helicase 194 353 3.5E-10 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3497_14340 0fbf751099d0376fcc0596dd30441f66 723 SUPERFAMILY SSF52540 189 369 2.16E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13070 3e5d250138c0a579a2f54f334dbeca67 222 PIRSF PIRSF002764 1 222 1.3E-76 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria C3497_13070 3e5d250138c0a579a2f54f334dbeca67 222 Pfam PF03379 CcmB protein 6 219 7.7E-72 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13070 3e5d250138c0a579a2f54f334dbeca67 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 3.6E-60 T 14-10-2018 C3497_13070 3e5d250138c0a579a2f54f334dbeca67 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 3.6E-60 T 14-10-2018 C3497_13070 3e5d250138c0a579a2f54f334dbeca67 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 3.6E-60 T 14-10-2018 C3497_13070 3e5d250138c0a579a2f54f334dbeca67 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 134 157 3.6E-60 T 14-10-2018 C3497_13070 3e5d250138c0a579a2f54f334dbeca67 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 3.6E-60 T 14-10-2018 C3497_13070 3e5d250138c0a579a2f54f334dbeca67 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 3.6E-60 T 14-10-2018 C3497_13070 3e5d250138c0a579a2f54f334dbeca67 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 157 176 3.6E-60 T 14-10-2018 C3497_13070 3e5d250138c0a579a2f54f334dbeca67 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 3.0E-69 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria C3497_10115 b8cb33a148aedd01e5d688d68bb7c674 405 SUPERFAMILY SSF48452 218 381 3.37E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_10115 b8cb33a148aedd01e5d688d68bb7c674 405 Gene3D G3DSA:1.25.40.10 312 402 9.8E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_10115 b8cb33a148aedd01e5d688d68bb7c674 405 SMART SM00028 319 352 45.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_10115 b8cb33a148aedd01e5d688d68bb7c674 405 SMART SM00028 218 251 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_10115 b8cb33a148aedd01e5d688d68bb7c674 405 SMART SM00028 353 386 59.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_10115 b8cb33a148aedd01e5d688d68bb7c674 405 Gene3D G3DSA:1.25.40.10 218 311 5.3E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_13995 ef069a36f34b64c0b2cc89bc2be8f6e4 234 SMART SM00382 28 198 5.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_13995 ef069a36f34b64c0b2cc89bc2be8f6e4 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_13995 ef069a36f34b64c0b2cc89bc2be8f6e4 234 SUPERFAMILY SSF52540 3 229 4.55E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13995 ef069a36f34b64c0b2cc89bc2be8f6e4 234 Pfam PF00005 ABC transporter 19 163 2.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_13995 ef069a36f34b64c0b2cc89bc2be8f6e4 234 Gene3D G3DSA:3.40.50.300 2 234 3.0E-62 T 14-10-2018 C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 Gene3D G3DSA:3.40.50.300 1 284 1.0E-80 T 14-10-2018 C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 Gene3D G3DSA:3.40.50.300 285 553 1.1E-74 T 14-10-2018 C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 SMART SM00382 31 235 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 SMART SM00382 347 525 2.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 SUPERFAMILY SSF52540 301 516 2.84E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 Pfam PF00005 ABC transporter 339 472 3.1E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 Pfam PF12848 ABC transporter 229 305 7.1E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 8.1E-288 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 SUPERFAMILY SSF52540 17 241 6.64E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07675 419e2cd64f2c1f754fe6ebb1cf14ef63 554 Pfam PF00005 ABC transporter 23 190 8.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_03680 8b308f23d7720fb36e2300e7b58c9fae 225 Pfam PF01794 Ferric reductase like transmembrane component 55 165 1.2E-14 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain C3497_03680 8b308f23d7720fb36e2300e7b58c9fae 225 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 9 205 21.693 T 14-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 C3497_13520 d69acc34420ec5454168a9c2b773327e 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 135 7.9E-33 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 C3497_13520 d69acc34420ec5454168a9c2b773327e 138 Gene3D G3DSA:3.30.420.270 63 132 9.4E-13 T 14-10-2018 C3497_00670 a94405cb57b0052fc2762bd6145c9ead 69 Gene3D G3DSA:2.20.28.10 16 69 2.2E-22 T 14-10-2018 C3497_00670 a94405cb57b0052fc2762bd6145c9ead 69 SUPERFAMILY SSF57802 18 68 1.27E-19 T 14-10-2018 C3497_00670 a94405cb57b0052fc2762bd6145c9ead 69 Pfam PF00301 Rubredoxin 19 64 2.2E-21 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C3497_00670 a94405cb57b0052fc2762bd6145c9ead 69 PRINTS PR00163 Rubredoxin signature 18 34 8.5E-10 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C3497_00670 a94405cb57b0052fc2762bd6145c9ead 69 PRINTS PR00163 Rubredoxin signature 48 64 8.5E-10 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C3497_00670 a94405cb57b0052fc2762bd6145c9ead 69 ProSitePatterns PS00202 Rubredoxin signature. 48 58 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 112.755 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Pfam PF14492 Elongation Factor G, domain II 409 482 2.0E-34 T 14-10-2018 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 699 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Gene3D G3DSA:3.40.50.300 1 293 2.4E-110 T 14-10-2018 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 SUPERFAMILY SSF52540 6 288 7.89E-104 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 SUPERFAMILY SSF50447 271 407 2.3E-35 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Gene3D G3DSA:3.30.70.240 610 681 1.2E-90 T 14-10-2018 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 SUPERFAMILY SSF54980 609 697 1.2E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 3.6E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 5.0E-64 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Pfam PF00679 Elongation factor G C-terminus 606 692 1.1E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 SUPERFAMILY SSF54211 484 605 3.79E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 SUPERFAMILY SSF54980 409 486 2.48E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Gene3D G3DSA:3.30.70.870 410 488 3.4E-33 T 14-10-2018 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 SMART SM00838 606 694 1.5E-56 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Gene3D G3DSA:2.40.30.10 294 405 1.4E-45 T 14-10-2018 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 SMART SM00889 485 604 5.1E-77 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Gene3D G3DSA:3.30.230.10 489 694 1.2E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_01845 cd83924cda4ceb3783f29a25577dca06 699 Pfam PF03764 Elongation factor G, domain IV 484 604 1.4E-49 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 PIRSF PIRSF005419 3 695 4.6E-251 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 18 692 2.1E-273 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 Pfam PF00771 FHIPEP family 28 683 1.5E-273 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 Gene3D G3DSA:1.10.490.80 596 692 4.1E-7 T 14-10-2018 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 Gene3D G3DSA:3.40.30.60 361 504 1.4E-54 T 14-10-2018 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 239 253 4.4E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 4.4E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 139 155 4.4E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 158 176 4.4E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 188 205 4.4E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 4.4E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 Gene3D G3DSA:1.10.8.540 505 593 1.7E-28 T 14-10-2018 C3497_03715 613bf8ffc119ce859e4b55a0a47c16e7 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 144 167 - T 14-10-2018 IPR025505 FHIPEP conserved site C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 PRINTS PR00045 Sigma-54 factor signature 456 474 1.5E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 PRINTS PR00045 Sigma-54 factor signature 382 394 1.5E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 PRINTS PR00045 Sigma-54 factor signature 195 212 1.5E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 PRINTS PR00045 Sigma-54 factor signature 398 409 1.5E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 Gene3D G3DSA:1.10.10.60 423 481 2.3E-23 T 14-10-2018 C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 480 1.8E-142 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 7.2E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 370 389 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 Pfam PF04552 Sigma-54, DNA binding domain 326 480 1.2E-67 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 461 468 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 PIRSF PIRSF000774 1 482 9.3E-157 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 Gene3D G3DSA:1.10.10.1330 125 250 1.2E-20 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily C3497_13655 eb8568c606fda8e6d6549c3c254e499c 482 Pfam PF04963 Sigma-54 factor, core binding domain 118 311 6.0E-59 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 C3497_05760 9875da6bf68d68151318081007e9958f 254 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 10 105 3.4E-8 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 C3497_05760 9875da6bf68d68151318081007e9958f 254 Gene3D G3DSA:3.30.750.120 5 123 7.6E-12 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily C3497_05760 9875da6bf68d68151318081007e9958f 254 SUPERFAMILY SSF63848 141 230 8.37E-28 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 C3497_05760 9875da6bf68d68151318081007e9958f 254 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 143 222 1.4E-27 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 C3497_05760 9875da6bf68d68151318081007e9958f 254 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 10 252 23.72 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 C3497_05760 9875da6bf68d68151318081007e9958f 254 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 13 239 1.1E-48 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 C3497_05760 9875da6bf68d68151318081007e9958f 254 Gene3D G3DSA:2.160.20.70 138 244 1.4E-28 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 C3497_10530 d7d21793a435e8f8548bf9577201feda 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10530 d7d21793a435e8f8548bf9577201feda 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 1.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10530 d7d21793a435e8f8548bf9577201feda 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10530 d7d21793a435e8f8548bf9577201feda 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10530 d7d21793a435e8f8548bf9577201feda 267 Gene3D G3DSA:3.40.50.720 3 259 1.1E-59 T 14-10-2018 C3497_10530 d7d21793a435e8f8548bf9577201feda 267 SUPERFAMILY SSF51735 8 262 6.57E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_10530 d7d21793a435e8f8548bf9577201feda 267 Pfam PF00106 short chain dehydrogenase 16 207 9.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_05465 ded8b7081c1adb238d45c57395273291 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3497_05465 ded8b7081c1adb238d45c57395273291 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 5.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_05465 ded8b7081c1adb238d45c57395273291 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_05465 ded8b7081c1adb238d45c57395273291 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 5.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_05465 ded8b7081c1adb238d45c57395273291 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_05465 ded8b7081c1adb238d45c57395273291 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_05465 ded8b7081c1adb238d45c57395273291 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 5.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_05465 ded8b7081c1adb238d45c57395273291 252 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 13 250 1.2E-99 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3497_05465 ded8b7081c1adb238d45c57395273291 252 SUPERFAMILY SSF51735 9 251 5.89E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_05465 ded8b7081c1adb238d45c57395273291 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 249 1.1E-65 T 14-10-2018 C3497_05465 ded8b7081c1adb238d45c57395273291 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 8.1E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_05465 ded8b7081c1adb238d45c57395273291 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 8.1E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_05465 ded8b7081c1adb238d45c57395273291 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 8.1E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_05465 ded8b7081c1adb238d45c57395273291 252 Gene3D G3DSA:3.40.50.720 3 252 3.3E-83 T 14-10-2018 C3497_05465 ded8b7081c1adb238d45c57395273291 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 194 4.2E-4 T 14-10-2018 C3497_09345 f2b7b234e9d205d88e1e646f207759ba 414 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site C3497_09345 f2b7b234e9d205d88e1e646f207759ba 414 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 335 413 4.8E-17 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain C3497_09345 f2b7b234e9d205d88e1e646f207759ba 414 SUPERFAMILY SSF117143 80 375 3.27E-80 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like C3497_09345 f2b7b234e9d205d88e1e646f207759ba 414 Pfam PF00460 Flagella basal body rod protein 3 33 2.6E-9 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 C3497_09345 f2b7b234e9d205d88e1e646f207759ba 414 Pfam PF07559 Flagellar basal body protein FlaE 181 295 2.4E-21 T 14-10-2018 IPR011491 Flagellar hook protein FlgE C3497_09345 f2b7b234e9d205d88e1e646f207759ba 414 Gene3D G3DSA:2.60.98.20 154 296 3.1E-28 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily C3497_09345 f2b7b234e9d205d88e1e646f207759ba 414 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 396 1.4E-103 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G C3497_07505 0a848de9be0c43bd01122fbd75f214a4 543 Gene3D G3DSA:3.40.50.300 1 284 6.2E-132 T 14-10-2018 C3497_07505 0a848de9be0c43bd01122fbd75f214a4 543 Hamap MF_01227 CTP synthase [pyrG]. 2 541 51.318 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 C3497_07505 0a848de9be0c43bd01122fbd75f214a4 543 SUPERFAMILY SSF52317 288 541 1.08E-81 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_07505 0a848de9be0c43bd01122fbd75f214a4 543 Gene3D G3DSA:3.40.50.880 285 542 1.1E-99 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_07505 0a848de9be0c43bd01122fbd75f214a4 543 SUPERFAMILY SSF52540 1 266 6.45E-123 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07505 0a848de9be0c43bd01122fbd75f214a4 543 Pfam PF06418 CTP synthase N-terminus 3 264 6.5E-127 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 C3497_07505 0a848de9be0c43bd01122fbd75f214a4 543 Pfam PF00117 Glutamine amidotransferase class-I 300 535 3.2E-55 T 14-10-2018 IPR017926 Glutamine amidotransferase C3497_07505 0a848de9be0c43bd01122fbd75f214a4 543 TIGRFAM TIGR00337 PyrG: CTP synthase 1 536 9.4E-249 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 C3497_02600 204eaf0b0983ca490fc60897e157727c 343 SUPERFAMILY SSF52540 84 333 3.78E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02600 204eaf0b0983ca490fc60897e157727c 343 SMART SM00962 132 332 2.3E-112 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_02600 204eaf0b0983ca490fc60897e157727c 343 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 305 318 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_02600 204eaf0b0983ca490fc60897e157727c 343 Gene3D G3DSA:1.20.120.140 36 330 1.0E-109 T 14-10-2018 C3497_02600 204eaf0b0983ca490fc60897e157727c 343 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 61 332 59.804 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 C3497_02600 204eaf0b0983ca490fc60897e157727c 343 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 61 331 3.8E-104 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 C3497_02600 204eaf0b0983ca490fc60897e157727c 343 SMART SM00963 38 118 3.2E-25 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_02600 204eaf0b0983ca490fc60897e157727c 343 Pfam PF00448 SRP54-type protein, GTPase domain 132 331 3.6E-72 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_02600 204eaf0b0983ca490fc60897e157727c 343 SMART SM00382 131 283 9.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_02600 204eaf0b0983ca490fc60897e157727c 343 Pfam PF02881 SRP54-type protein, helical bundle domain 49 114 2.1E-14 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_02600 204eaf0b0983ca490fc60897e157727c 343 SUPERFAMILY SSF47364 33 112 1.45E-22 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 C3497_02600 204eaf0b0983ca490fc60897e157727c 343 Gene3D G3DSA:3.40.50.300 129 320 1.0E-109 T 14-10-2018 C3497_07875 01d8d503fca451538f8d42d159b2937d 272 SUPERFAMILY SSF52540 15 228 1.38E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07875 01d8d503fca451538f8d42d159b2937d 272 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_07875 01d8d503fca451538f8d42d159b2937d 272 Pfam PF00005 ABC transporter 29 160 5.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_07875 01d8d503fca451538f8d42d159b2937d 272 SMART SM00382 35 220 9.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_07875 01d8d503fca451538f8d42d159b2937d 272 Gene3D G3DSA:3.40.50.300 6 221 3.9E-53 T 14-10-2018 C3497_07270 6962781543780ff8d29db623f3b1e5c1 407 Gene3D G3DSA:1.20.1250.20 9 196 7.4E-33 T 14-10-2018 C3497_07270 6962781543780ff8d29db623f3b1e5c1 407 Gene3D G3DSA:1.20.1250.20 205 407 6.9E-9 T 14-10-2018 C3497_07270 6962781543780ff8d29db623f3b1e5c1 407 Pfam PF07690 Major Facilitator Superfamily 18 355 1.7E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_07270 6962781543780ff8d29db623f3b1e5c1 407 SUPERFAMILY SSF103473 9 403 6.54E-49 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_12295 8da6f452f6b88b9629690ab7bada78c1 408 SUPERFAMILY SSF53756 18 390 1.02E-77 T 14-10-2018 C3497_12295 8da6f452f6b88b9629690ab7bada78c1 408 Pfam PF13439 Glycosyltransferase Family 4 29 196 3.2E-25 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_12295 8da6f452f6b88b9629690ab7bada78c1 408 Pfam PF13692 Glycosyl transferases group 1 220 353 3.2E-26 T 14-10-2018 C3497_12295 8da6f452f6b88b9629690ab7bada78c1 408 Gene3D G3DSA:3.40.50.2000 195 374 1.3E-63 T 14-10-2018 C3497_12295 8da6f452f6b88b9629690ab7bada78c1 408 Gene3D G3DSA:3.40.50.2000 20 194 1.3E-63 T 14-10-2018 C3497_07340 c052a207a8ec52f940591746129c4500 454 SMART SM00228 196 279 5.7E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_07340 c052a207a8ec52f940591746129c4500 454 SMART SM00228 115 187 0.26 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_07340 c052a207a8ec52f940591746129c4500 454 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 11 452 6.5E-115 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 C3497_07340 c052a207a8ec52f940591746129c4500 454 Gene3D G3DSA:2.30.42.10 127 219 5.1E-15 T 14-10-2018 C3497_07340 c052a207a8ec52f940591746129c4500 454 SUPERFAMILY SSF50156 201 289 4.73E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3497_07340 c052a207a8ec52f940591746129c4500 454 SUPERFAMILY SSF50156 86 185 4.73E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3497_07340 c052a207a8ec52f940591746129c4500 454 Pfam PF02163 Peptidase family M50 10 439 3.7E-81 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 C3497_07340 c052a207a8ec52f940591746129c4500 454 Gene3D G3DSA:2.30.42.10 220 308 3.9E-18 T 14-10-2018 C3497_07340 c052a207a8ec52f940591746129c4500 454 Pfam PF13180 PDZ domain 128 184 5.5E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_07930 fcd3aed1448e218368495a33c4522586 164 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 135 2.5E-54 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 C3497_07930 fcd3aed1448e218368495a33c4522586 164 SUPERFAMILY SSF52540 1 161 8.05E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07930 fcd3aed1448e218368495a33c4522586 164 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 159 1.8E-49 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 C3497_07930 fcd3aed1448e218368495a33c4522586 164 Gene3D G3DSA:3.40.50.300 5 157 1.3E-60 T 14-10-2018 C3497_07930 fcd3aed1448e218368495a33c4522586 164 Gene3D G3DSA:2.20.25.120 47 79 1.3E-60 T 14-10-2018 C3497_01725 60100f868c8db65af33c8237db36486f 388 SUPERFAMILY SSF89796 5 388 5.23E-129 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily C3497_01725 60100f868c8db65af33c8237db36486f 388 Pfam PF02515 CoA-transferase family III 6 365 2.6E-106 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 C3497_01725 60100f868c8db65af33c8237db36486f 388 Gene3D G3DSA:3.30.1540.10 233 315 1.1E-30 T 14-10-2018 C3497_01725 60100f868c8db65af33c8237db36486f 388 Gene3D G3DSA:3.40.50.10540 3 232 8.6E-86 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily C3497_09355 c042679cfd883cd9089dbd6ecea2c798 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 89 134 3.4E-15 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain C3497_09355 c042679cfd883cd9089dbd6ecea2c798 137 Pfam PF00460 Flagella basal body rod protein 7 32 4.1E-8 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 C3497_09355 c042679cfd883cd9089dbd6ecea2c798 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site C3497_09355 c042679cfd883cd9089dbd6ecea2c798 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 135 3.2E-51 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 C3497_14100 de58ec486ce819c63342d3f9eaa5ffc0 308 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 11 303 17.271 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C3497_14100 de58ec486ce819c63342d3f9eaa5ffc0 308 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 6 276 1.0E-112 T 14-10-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 C3497_14100 de58ec486ce819c63342d3f9eaa5ffc0 308 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 137 243 2.5E-27 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C3497_14100 de58ec486ce819c63342d3f9eaa5ffc0 308 Pfam PF01867 CRISPR associated protein Cas1 134 233 1.3E-8 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C3497_14100 de58ec486ce819c63342d3f9eaa5ffc0 308 Gene3D G3DSA:3.100.10.20 1 98 1.7E-33 T 14-10-2018 C3497_14100 de58ec486ce819c63342d3f9eaa5ffc0 308 Gene3D G3DSA:1.20.120.920 99 295 7.6E-86 T 14-10-2018 C3497_04020 2da98e2ea98e1f8e597fbd41d147951b 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.7E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3497_04020 2da98e2ea98e1f8e597fbd41d147951b 558 Pfam PF00501 AMP-binding enzyme 29 461 4.9E-105 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3497_04020 2da98e2ea98e1f8e597fbd41d147951b 558 SUPERFAMILY SSF56801 18 553 3.4E-154 T 14-10-2018 C3497_04020 2da98e2ea98e1f8e597fbd41d147951b 558 Gene3D G3DSA:3.30.300.310 457 557 5.5E-34 T 14-10-2018 C3497_04020 2da98e2ea98e1f8e597fbd41d147951b 558 Gene3D G3DSA:3.40.50.12780 14 452 3.0E-113 T 14-10-2018 C3497_04020 2da98e2ea98e1f8e597fbd41d147951b 558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3497_07310 a975e1c1549465a96729016e250a90fd 390 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 2 375 2.3E-106 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 C3497_07310 a975e1c1549465a96729016e250a90fd 390 Pfam PF02684 Lipid-A-disaccharide synthetase 5 359 1.2E-98 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 C3497_07310 a975e1c1549465a96729016e250a90fd 390 SUPERFAMILY SSF53756 4 357 7.68E-34 T 14-10-2018 C3497_07310 a975e1c1549465a96729016e250a90fd 390 Gene3D G3DSA:3.40.50.2000 173 358 2.3E-9 T 14-10-2018 C3497_07310 a975e1c1549465a96729016e250a90fd 390 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 2 379 37.414 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 C3497_11515 1cdefd508259ea1bb8501b3f69513630 273 SUPERFAMILY SSF69593 15 231 1.83E-39 T 14-10-2018 C3497_11515 1cdefd508259ea1bb8501b3f69513630 273 Pfam PF01553 Acyltransferase 59 182 1.8E-23 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3497_11515 1cdefd508259ea1bb8501b3f69513630 273 SMART SM00563 71 185 1.7E-37 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3497_12590 4cc376cc40eecd92e7329fe2f8d7391e 468 SUPERFAMILY SSF52540 202 453 1.19E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12590 4cc376cc40eecd92e7329fe2f8d7391e 468 Gene3D G3DSA:3.40.50.300 182 462 1.8E-106 T 14-10-2018 C3497_12590 4cc376cc40eecd92e7329fe2f8d7391e 468 Gene3D G3DSA:1.10.860.10 17 181 1.1E-53 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal C3497_12590 4cc376cc40eecd92e7329fe2f8d7391e 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 461 3.8E-177 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 C3497_12590 4cc376cc40eecd92e7329fe2f8d7391e 468 SMART SM00382 221 419 0.0011 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_12590 4cc376cc40eecd92e7329fe2f8d7391e 468 Pfam PF03796 DnaB-like helicase C terminal domain 204 459 1.4E-113 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 C3497_12590 4cc376cc40eecd92e7329fe2f8d7391e 468 SUPERFAMILY SSF48024 22 133 3.01E-38 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 C3497_12590 4cc376cc40eecd92e7329fe2f8d7391e 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 7.2E-36 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 C3497_05820 4e044b72c741aa4008d31d975a69a562 346 SUPERFAMILY SSF55326 5 159 6.28E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_05820 4e044b72c741aa4008d31d975a69a562 346 Hamap MF_00625 Selenide, water dikinase [selD]. 3 346 42.724 T 14-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 C3497_05820 4e044b72c741aa4008d31d975a69a562 346 SUPERFAMILY SSF56042 162 340 1.41E-49 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_05820 4e044b72c741aa4008d31d975a69a562 346 PIRSF PIRSF036407 1 346 1.9E-116 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 C3497_05820 4e044b72c741aa4008d31d975a69a562 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 168 341 1.3E-30 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C3497_05820 4e044b72c741aa4008d31d975a69a562 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 155 1.3E-20 T 14-10-2018 IPR016188 PurM-like, N-terminal domain C3497_05820 4e044b72c741aa4008d31d975a69a562 346 Gene3D G3DSA:3.90.650.10 162 345 4.8E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_05820 4e044b72c741aa4008d31d975a69a562 346 TIGRFAM TIGR00476 selD: selenide, water dikinase 5 314 2.6E-129 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 C3497_05820 4e044b72c741aa4008d31d975a69a562 346 Gene3D G3DSA:3.30.1330.10 1 160 3.9E-48 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_04645 81e36ce43b16e806c9ee4102f52bd50f 261 SUPERFAMILY SSF50494 30 259 2.25E-33 T 14-10-2018 IPR009003 Peptidase S1, PA clan C3497_04645 81e36ce43b16e806c9ee4102f52bd50f 261 Gene3D G3DSA:2.40.10.10 131 261 5.1E-21 T 14-10-2018 C3497_04645 81e36ce43b16e806c9ee4102f52bd50f 261 Pfam PF13365 Trypsin-like peptidase domain 61 224 3.0E-24 T 14-10-2018 C3497_04645 81e36ce43b16e806c9ee4102f52bd50f 261 Gene3D G3DSA:2.40.10.10 30 129 8.1E-13 T 14-10-2018 C3497_05285 c1d741f359c37ff4f45c0fd70e1ce5e3 141 Gene3D G3DSA:1.20.120.910 12 141 3.9E-40 T 14-10-2018 C3497_05285 c1d741f359c37ff4f45c0fd70e1ce5e3 141 SUPERFAMILY SSF57716 101 139 9.03E-11 T 14-10-2018 C3497_05285 c1d741f359c37ff4f45c0fd70e1ce5e3 141 SUPERFAMILY SSF109635 8 100 1.57E-34 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily C3497_05285 c1d741f359c37ff4f45c0fd70e1ce5e3 141 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 18 140 30.371 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 C3497_05285 c1d741f359c37ff4f45c0fd70e1ce5e3 141 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 104 128 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site C3497_05285 c1d741f359c37ff4f45c0fd70e1ce5e3 141 PRINTS PR00618 DksA/TraR zinc finger signature 116 128 8.1E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria C3497_05285 c1d741f359c37ff4f45c0fd70e1ce5e3 141 PRINTS PR00618 DksA/TraR zinc finger signature 104 115 8.1E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria C3497_05285 c1d741f359c37ff4f45c0fd70e1ce5e3 141 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 22 130 1.1E-50 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 C3497_05285 c1d741f359c37ff4f45c0fd70e1ce5e3 141 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 99 133 2.1E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 C3497_10360 cf3da27a16118efc2ea5dd111714a1d0 399 SUPERFAMILY SSF53383 43 391 1.5E-28 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_10360 cf3da27a16118efc2ea5dd111714a1d0 399 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 47 184 7.2E-21 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C3497_10360 cf3da27a16118efc2ea5dd111714a1d0 399 Gene3D G3DSA:3.40.640.10 38 199 1.3E-29 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 SUPERFAMILY SSF81767 227 367 4.45E-43 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 PRINTS PR00906 SecA protein signature 117 127 5.4E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 PRINTS PR00906 SecA protein signature 63 87 5.4E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 PRINTS PR00906 SecA protein signature 101 115 5.4E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 PRINTS PR00906 SecA protein signature 412 425 5.4E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 PRINTS PR00906 SecA protein signature 375 392 5.4E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 PRINTS PR00906 SecA protein signature 338 360 5.4E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 PRINTS PR00906 SecA protein signature 170 190 5.4E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 Pfam PF07517 SecA DEAD-like domain 6 400 4.8E-134 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 Pfam PF01043 SecA preprotein cross-linking domain 232 357 9.6E-37 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 Gene3D G3DSA:1.10.3060.10 627 839 6.9E-75 T 14-10-2018 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 Gene3D G3DSA:3.40.50.300 22 414 1.5E-178 T 14-10-2018 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 823 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 SUPERFAMILY SSF81886 626 895 9.55E-84 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 SMART SM00957 6 401 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 SMART SM00958 228 357 1.5E-75 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 Pfam PF07516 SecA Wing and Scaffold domain 623 836 4.2E-68 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 SUPERFAMILY SSF52540 5 414 1.79E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 Gene3D G3DSA:3.10.450.50 853 906 6.0E-9 T 14-10-2018 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 Gene3D G3DSA:3.40.50.300 416 625 6.7E-89 T 14-10-2018 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 ProSitePatterns PS01312 SecA family signature. 499 514 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 838 20.06 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 Gene3D G3DSA:3.90.1440.10 229 367 1.5E-178 T 14-10-2018 C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 Pfam PF02810 SEC-C motif 887 905 1.8E-10 T 14-10-2018 IPR004027 SEC-C motif C3497_12085 4f6aefe87ef0cb06a9cc2a2856b60d05 907 SUPERFAMILY SSF52540 415 624 9.43E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04915 63f782c2fb73d69cfca4c08358f411f9 214 SUPERFAMILY SSF53098 35 193 8.13E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_04915 63f782c2fb73d69cfca4c08358f411f9 214 Gene3D G3DSA:3.30.420.10 82 193 6.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_11000 7ea15e98a0298fa23854203992187622 470 Gene3D G3DSA:1.20.1600.10 33 450 1.2E-32 T 14-10-2018 C3497_11000 7ea15e98a0298fa23854203992187622 470 Pfam PF02321 Outer membrane efflux protein 69 245 2.8E-11 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_11000 7ea15e98a0298fa23854203992187622 470 Pfam PF02321 Outer membrane efflux protein 276 446 8.8E-6 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_11000 7ea15e98a0298fa23854203992187622 470 SUPERFAMILY SSF56954 4 447 5.89E-46 T 14-10-2018 C3497_03745 dd36df4c5e324ff9edb5324d49b857cc 284 Pfam PF00691 OmpA family 142 240 3.8E-21 T 14-10-2018 IPR006665 OmpA-like domain C3497_03745 dd36df4c5e324ff9edb5324d49b857cc 284 SUPERFAMILY SSF103088 131 246 5.76E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_03745 dd36df4c5e324ff9edb5324d49b857cc 284 Gene3D G3DSA:3.30.1330.60 89 253 3.7E-49 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_03745 dd36df4c5e324ff9edb5324d49b857cc 284 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 2.8E-23 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 459 4.6E-216 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 SUPERFAMILY SSF52540 137 381 2.04E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 462 5.0E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 5.0E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 SMART SM00448 2 115 4.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 Gene3D G3DSA:1.10.8.60 310 381 4.3E-21 T 14-10-2018 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 Gene3D G3DSA:3.40.50.2300 1 123 2.0E-35 T 14-10-2018 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 Pfam PF00072 Response regulator receiver domain 4 115 4.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 5.3E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 SUPERFAMILY SSF46689 378 462 3.94E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 SUPERFAMILY SSF52172 2 183 1.37E-40 T 14-10-2018 IPR011006 CheY-like superfamily C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 Gene3D G3DSA:1.10.10.60 382 462 5.8E-20 T 14-10-2018 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 Pfam PF00158 Sigma-54 interaction domain 138 304 1.0E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 Gene3D G3DSA:3.40.50.300 125 309 1.2E-66 T 14-10-2018 C3497_02315 5ae6aeb3619bf77e3dff70451824b78e 474 SMART SM00382 158 301 5.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_05455 94a678d274d1b9b42eca4d2edf6e9c0d 321 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 321 69.037 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 C3497_05455 94a678d274d1b9b42eca4d2edf6e9c0d 321 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 320 1.3E-36 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 C3497_05455 94a678d274d1b9b42eca4d2edf6e9c0d 321 SUPERFAMILY SSF53901 4 319 3.76E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_05455 94a678d274d1b9b42eca4d2edf6e9c0d 321 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 186 5.2E-34 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 C3497_05455 94a678d274d1b9b42eca4d2edf6e9c0d 321 Gene3D G3DSA:3.40.47.10 1 321 5.3E-131 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_05455 94a678d274d1b9b42eca4d2edf6e9c0d 321 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 320 5.8E-122 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 C3497_01510 34f6906fa030967db882d16f31cd4216 528 SUPERFAMILY SSF81442 21 527 9.68E-194 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 24 527 5.6E-215 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 C3497_01510 34f6906fa030967db882d16f31cd4216 528 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 251 305 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 Gene3D G3DSA:1.20.210.10 12 528 2.0E-218 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 70 93 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 140 152 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 249 270 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 432 453 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 23 48 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 217 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 354 372 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 121 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 401 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 169 187 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 295 310 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 PRINTS PR01165 Cytochrome c oxidase subunit I signature 319 340 5.3E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01510 34f6906fa030967db882d16f31cd4216 528 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 32 473 2.6E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_14655 cb4adeaa37ef1fa31c21ecd5da1cd151 316 Gene3D G3DSA:2.40.40.10 111 205 2.4E-37 T 14-10-2018 IPR036908 RlpA-like domain superfamily C3497_14655 cb4adeaa37ef1fa31c21ecd5da1cd151 316 SUPERFAMILY SSF50685 112 200 3.1E-11 T 14-10-2018 IPR036908 RlpA-like domain superfamily C3497_14655 cb4adeaa37ef1fa31c21ecd5da1cd151 316 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 114 206 8.8E-42 T 14-10-2018 IPR012997 Rare lipoprotein A C3497_14655 cb4adeaa37ef1fa31c21ecd5da1cd151 316 SUPERFAMILY SSF110997 239 315 2.75E-10 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3497_14655 cb4adeaa37ef1fa31c21ecd5da1cd151 316 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 15 204 25.899 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 C3497_14655 cb4adeaa37ef1fa31c21ecd5da1cd151 316 Pfam PF03330 Lytic transglycolase 112 201 3.1E-27 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain C3497_14655 cb4adeaa37ef1fa31c21ecd5da1cd151 316 Pfam PF05036 Sporulation related domain 241 314 1.8E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 C3497_00485 f7d26bab54b24272a47865dfa4668ed7 121 Gene3D G3DSA:3.40.50.12740 1 120 2.1E-5 T 14-10-2018 C3497_00485 f7d26bab54b24272a47865dfa4668ed7 121 SUPERFAMILY SSF52172 2 112 2.02E-5 T 14-10-2018 IPR011006 CheY-like superfamily C3497_14470 5b19c8d802faffa4ea981e3f60d3a1d7 237 Pfam PF00849 RNA pseudouridylate synthase 62 193 7.2E-13 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_14470 5b19c8d802faffa4ea981e3f60d3a1d7 237 SUPERFAMILY SSF55174 1 79 9.86E-11 T 14-10-2018 C3497_14470 5b19c8d802faffa4ea981e3f60d3a1d7 237 Pfam PF01479 S4 domain 1 37 3.9E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_14470 5b19c8d802faffa4ea981e3f60d3a1d7 237 SUPERFAMILY SSF55120 61 228 7.2E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_14470 5b19c8d802faffa4ea981e3f60d3a1d7 237 Gene3D G3DSA:3.30.70.580 63 226 1.7E-48 T 14-10-2018 C3497_14470 5b19c8d802faffa4ea981e3f60d3a1d7 237 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3497_14470 5b19c8d802faffa4ea981e3f60d3a1d7 237 Gene3D G3DSA:3.10.290.10 1 62 1.9E-8 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3497_14470 5b19c8d802faffa4ea981e3f60d3a1d7 237 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 1.8E-36 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3497_14470 5b19c8d802faffa4ea981e3f60d3a1d7 237 Gene3D G3DSA:3.30.70.1560 129 210 1.7E-48 T 14-10-2018 C3497_07655 aaac4a5a684696b3e7ea4659b8494de6 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_07655 aaac4a5a684696b3e7ea4659b8494de6 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_07655 aaac4a5a684696b3e7ea4659b8494de6 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_07655 aaac4a5a684696b3e7ea4659b8494de6 308 Gene3D G3DSA:3.40.190.290 91 298 2.0E-45 T 14-10-2018 C3497_07655 aaac4a5a684696b3e7ea4659b8494de6 308 SUPERFAMILY SSF53850 91 295 1.45E-47 T 14-10-2018 C3497_07655 aaac4a5a684696b3e7ea4659b8494de6 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.0E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_07655 aaac4a5a684696b3e7ea4659b8494de6 308 SUPERFAMILY SSF46785 1 109 2.27E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_07655 aaac4a5a684696b3e7ea4659b8494de6 308 Pfam PF03466 LysR substrate binding domain 90 291 1.3E-52 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_07655 aaac4a5a684696b3e7ea4659b8494de6 308 Gene3D G3DSA:1.10.10.10 1 84 9.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_06300 2fcf23fa60521602f1a0143b094d07c7 522 Gene3D G3DSA:3.40.50.1980 210 490 4.2E-186 T 14-10-2018 C3497_06300 2fcf23fa60521602f1a0143b094d07c7 522 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 87 94 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C3497_06300 2fcf23fa60521602f1a0143b094d07c7 522 Gene3D G3DSA:3.40.50.1980 58 483 4.2E-186 T 14-10-2018 C3497_06300 2fcf23fa60521602f1a0143b094d07c7 522 Pfam PF11844 Domain of unknown function (DUF3364) 2 55 5.4E-21 T 14-10-2018 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C3497_06300 2fcf23fa60521602f1a0143b094d07c7 522 Gene3D G3DSA:3.40.50.1980 69 209 4.2E-186 T 14-10-2018 C3497_06300 2fcf23fa60521602f1a0143b094d07c7 522 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 522 5.3E-274 T 14-10-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C3497_06300 2fcf23fa60521602f1a0143b094d07c7 522 Gene3D G3DSA:1.20.89.10 320 506 4.2E-186 T 14-10-2018 C3497_06300 2fcf23fa60521602f1a0143b094d07c7 522 SUPERFAMILY SSF53807 2 521 2.26E-174 T 14-10-2018 C3497_06300 2fcf23fa60521602f1a0143b094d07c7 522 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 69 500 2.7E-122 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 C3497_06300 2fcf23fa60521602f1a0143b094d07c7 522 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 150 164 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C3497_03410 89bffa4ddee246765de529f94ce40802 215 Pfam PF13488 Glycine zipper 32 79 4.0E-15 T 14-10-2018 IPR039567 Glycine zipper domain C3497_03410 89bffa4ddee246765de529f94ce40802 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 173 192 3.5E-8 T 14-10-2018 C3497_03410 89bffa4ddee246765de529f94ce40802 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 193 213 3.5E-8 T 14-10-2018 C3497_03410 89bffa4ddee246765de529f94ce40802 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 155 172 3.5E-8 T 14-10-2018 C3497_03410 89bffa4ddee246765de529f94ce40802 215 SUPERFAMILY SSF103088 97 212 2.22E-41 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_03410 89bffa4ddee246765de529f94ce40802 215 ProSitePatterns PS01068 OmpA-like domain. 142 186 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 C3497_03410 89bffa4ddee246765de529f94ce40802 215 PRINTS PR01021 OMPA domain signature 110 132 1.3E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_03410 89bffa4ddee246765de529f94ce40802 215 PRINTS PR01021 OMPA domain signature 155 171 1.3E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_03410 89bffa4ddee246765de529f94ce40802 215 PRINTS PR01021 OMPA domain signature 140 155 1.3E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_03410 89bffa4ddee246765de529f94ce40802 215 Gene3D G3DSA:3.30.1330.60 73 215 8.0E-52 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_03410 89bffa4ddee246765de529f94ce40802 215 Pfam PF00691 OmpA family 109 204 1.1E-24 T 14-10-2018 IPR006665 OmpA-like domain C3497_01350 cb93819b974c61d39909e54e28571f0c 396 SUPERFAMILY SSF88697 1 70 5.84E-17 T 14-10-2018 IPR015947 PUA-like superfamily C3497_01350 cb93819b974c61d39909e54e28571f0c 396 SMART SM00359 2 87 7.1E-16 T 14-10-2018 IPR002478 PUA domain GO:0003723 C3497_01350 cb93819b974c61d39909e54e28571f0c 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 173 349 2.6E-22 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 C3497_01350 cb93819b974c61d39909e54e28571f0c 396 Gene3D G3DSA:3.30.750.80 72 180 9.6E-34 T 14-10-2018 C3497_01350 cb93819b974c61d39909e54e28571f0c 396 SUPERFAMILY SSF53335 79 392 1.34E-67 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_01350 cb93819b974c61d39909e54e28571f0c 396 Gene3D G3DSA:3.40.50.150 181 395 1.2E-70 T 14-10-2018 C3497_01350 cb93819b974c61d39909e54e28571f0c 396 Gene3D G3DSA:2.30.130.10 1 70 5.0E-28 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 C3497_03575 cf9377e9df162451adb1d2966215c478 157 Gene3D G3DSA:3.40.1280.10 1 156 4.0E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3497_03575 cf9377e9df162451adb1d2966215c478 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.175 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 C3497_03575 cf9377e9df162451adb1d2966215c478 157 PIRSF PIRSF029256 1 154 3.0E-62 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 C3497_03575 cf9377e9df162451adb1d2966215c478 157 Pfam PF00588 SpoU rRNA Methylase family 3 142 4.2E-31 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C3497_03575 cf9377e9df162451adb1d2966215c478 157 SUPERFAMILY SSF75217 2 152 2.29E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3497_00650 af396c60c9954e8f8228454e6fcccf18 301 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 78 286 1.3E-86 T 14-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 C3497_00650 af396c60c9954e8f8228454e6fcccf18 301 Gene3D G3DSA:3.40.50.300 68 291 1.5E-60 T 14-10-2018 C3497_00650 af396c60c9954e8f8228454e6fcccf18 301 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 106 267 1.3E-34 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain C3497_00650 af396c60c9954e8f8228454e6fcccf18 301 PIRSF PIRSF005624 71 301 3.3E-93 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 C3497_00650 af396c60c9954e8f8228454e6fcccf18 301 SUPERFAMILY SSF52540 95 295 7.48E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02995 4009dce51cfe5b4be5aec76358c068d4 419 SUPERFAMILY SSF51905 1 412 4.01E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02995 4009dce51cfe5b4be5aec76358c068d4 419 Pfam PF01266 FAD dependent oxidoreductase 2 402 6.6E-63 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 C3497_02995 4009dce51cfe5b4be5aec76358c068d4 419 Gene3D G3DSA:3.50.50.60 3 67 6.3E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02995 4009dce51cfe5b4be5aec76358c068d4 419 Gene3D G3DSA:3.50.50.60 100 410 9.4E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02995 4009dce51cfe5b4be5aec76358c068d4 419 SUPERFAMILY SSF54373 275 365 2.75E-14 T 14-10-2018 C3497_02995 4009dce51cfe5b4be5aec76358c068d4 419 Gene3D G3DSA:3.30.9.10 134 367 9.4E-49 T 14-10-2018 C3497_00365 ff73968992ab114742127a79cbca1d22 173 PRINTS PR01100 Shikimate kinase family signature 28 41 3.1E-25 T 14-10-2018 C3497_00365 ff73968992ab114742127a79cbca1d22 173 PRINTS PR01100 Shikimate kinase family signature 74 83 3.1E-25 T 14-10-2018 C3497_00365 ff73968992ab114742127a79cbca1d22 173 PRINTS PR01100 Shikimate kinase family signature 4 19 3.1E-25 T 14-10-2018 C3497_00365 ff73968992ab114742127a79cbca1d22 173 PRINTS PR01100 Shikimate kinase family signature 95 112 3.1E-25 T 14-10-2018 C3497_00365 ff73968992ab114742127a79cbca1d22 173 PRINTS PR01100 Shikimate kinase family signature 56 64 3.1E-25 T 14-10-2018 C3497_00365 ff73968992ab114742127a79cbca1d22 173 Pfam PF01202 Shikimate kinase 10 166 2.2E-55 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 C3497_00365 ff73968992ab114742127a79cbca1d22 173 ProSitePatterns PS01128 Shikimate kinase signature. 57 82 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 C3497_00365 ff73968992ab114742127a79cbca1d22 173 Hamap MF_00109 Shikimate kinase [aroK]. 1 167 30.41 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 C3497_00365 ff73968992ab114742127a79cbca1d22 173 Gene3D G3DSA:3.40.50.300 1 171 2.2E-60 T 14-10-2018 C3497_00365 ff73968992ab114742127a79cbca1d22 173 SUPERFAMILY SSF52540 3 166 3.16E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05375 49e169a292036de37cac2dfc4558ceb1 654 Pfam PF13473 Cupredoxin-like domain 559 652 3.5E-11 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain C3497_05375 49e169a292036de37cac2dfc4558ceb1 654 SUPERFAMILY SSF50974 75 530 1.16E-114 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 C3497_05375 49e169a292036de37cac2dfc4558ceb1 654 SUPERFAMILY SSF49503 521 653 1.11E-32 T 14-10-2018 IPR008972 Cupredoxin C3497_05375 49e169a292036de37cac2dfc4558ceb1 654 Gene3D G3DSA:2.130.10.10 72 544 3.5E-183 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C3497_05375 49e169a292036de37cac2dfc4558ceb1 654 Gene3D G3DSA:2.60.40.420 545 654 1.7E-36 T 14-10-2018 IPR008972 Cupredoxin C3497_05375 49e169a292036de37cac2dfc4558ceb1 654 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 17 653 1.4E-302 T 14-10-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 C3497_12360 44974f3b21ac55cd0b4c129aca86e40f 571 SUPERFAMILY SSF52540 174 565 3.12E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12360 44974f3b21ac55cd0b4c129aca86e40f 571 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 386 400 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_12360 44974f3b21ac55cd0b4c129aca86e40f 571 Gene3D G3DSA:3.30.450.90 162 291 2.3E-45 T 14-10-2018 C3497_12360 44974f3b21ac55cd0b4c129aca86e40f 571 Gene3D G3DSA:3.30.300.160 72 151 3.0E-14 T 14-10-2018 C3497_12360 44974f3b21ac55cd0b4c129aca86e40f 571 Pfam PF00437 Type II/IV secretion system protein 199 458 1.2E-83 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_12360 44974f3b21ac55cd0b4c129aca86e40f 571 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 50 152 1.2E-16 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal C3497_12360 44974f3b21ac55cd0b4c129aca86e40f 571 SMART SM00382 319 444 2.7E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_12360 44974f3b21ac55cd0b4c129aca86e40f 571 SUPERFAMILY SSF160246 15 149 4.18E-30 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C3497_12360 44974f3b21ac55cd0b4c129aca86e40f 571 Gene3D G3DSA:3.40.50.300 293 571 2.3E-111 T 14-10-2018 C3497_11730 1f894b56b5b7ff5a49e802effcf197a4 153 Pfam PF04214 Protein of unknown function, DUF 59 127 1.8E-30 T 14-10-2018 IPR007332 Protein of unknown function DUF411 C3497_09225 f404186c53e32db09c9668724dbd25a6 108 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 27 107 3.2E-25 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 C3497_09225 f404186c53e32db09c9668724dbd25a6 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 72 88 2.3E-14 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 C3497_09225 f404186c53e32db09c9668724dbd25a6 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 37 53 2.3E-14 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 C3497_09225 f404186c53e32db09c9668724dbd25a6 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 93 106 2.3E-14 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 C3497_09225 f404186c53e32db09c9668724dbd25a6 108 Pfam PF02049 Flagellar hook-basal body complex protein FliE 21 108 8.1E-31 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 C3497_09225 f404186c53e32db09c9668724dbd25a6 108 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 108 18.575 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 C3497_00890 640870d544912804da3c604f5f914ce7 363 Gene3D G3DSA:3.40.50.10990 208 361 1.7E-19 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3497_00890 640870d544912804da3c604f5f914ce7 363 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 204 37.644 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_00890 640870d544912804da3c604f5f914ce7 363 Gene3D G3DSA:3.90.870.10 1 207 1.5E-88 T 14-10-2018 C3497_00890 640870d544912804da3c604f5f914ce7 363 PIRSF PIRSF001259 2 362 8.3E-108 T 14-10-2018 C3497_00890 640870d544912804da3c604f5f914ce7 363 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 200 2.3E-73 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_00890 640870d544912804da3c604f5f914ce7 363 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 199 1.3E-83 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_00890 640870d544912804da3c604f5f914ce7 363 Pfam PF00925 GTP cyclohydrolase II 209 359 9.3E-28 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3497_00890 640870d544912804da3c604f5f914ce7 363 SUPERFAMILY SSF142695 206 359 1.31E-39 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3497_00890 640870d544912804da3c604f5f914ce7 363 SUPERFAMILY SSF55821 4 203 4.81E-86 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 Gene3D G3DSA:3.40.50.460 142 387 2.8E-137 T 14-10-2018 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 258 280 2.2E-15 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 197 214 2.2E-15 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 179 195 2.2E-15 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 2.2E-15 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 104 120 2.2E-15 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 137 154 2.2E-15 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 SUPERFAMILY SSF53784 4 407 1.57E-99 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 PIRSF PIRSF036483 2 418 4.1E-162 T 14-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 Pfam PF00365 Phosphofructokinase 10 324 5.6E-49 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 399 42.825 T 14-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 C3497_06650 876d17e1f2d8a7f814e8f401c40ca761 418 Gene3D G3DSA:3.40.50.450 5 400 2.8E-137 T 14-10-2018 C3497_03645 65d3f6f5e2d775c0f55c352a9e97c26e 214 SMART SM00855 6 161 1.8E-20 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3497_03645 65d3f6f5e2d775c0f55c352a9e97c26e 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 9 18 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 C3497_03645 65d3f6f5e2d775c0f55c352a9e97c26e 214 Gene3D G3DSA:3.40.50.1240 5 212 9.4E-66 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3497_03645 65d3f6f5e2d775c0f55c352a9e97c26e 214 PIRSF PIRSF000709 1 188 9.8E-14 T 14-10-2018 C3497_03645 65d3f6f5e2d775c0f55c352a9e97c26e 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 200 7.9E-67 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3497_03645 65d3f6f5e2d775c0f55c352a9e97c26e 214 SUPERFAMILY SSF53254 5 207 1.94E-64 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3497_02955 112b471e98ce86479de11197fe2784a2 196 Pfam PF00355 Rieske [2Fe-2S] domain 53 179 1.2E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 C3497_02955 112b471e98ce86479de11197fe2784a2 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 151 163 2.9E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 C3497_02955 112b471e98ce86479de11197fe2784a2 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 164 176 2.9E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 C3497_02955 112b471e98ce86479de11197fe2784a2 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 2.9E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 C3497_02955 112b471e98ce86479de11197fe2784a2 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 11 192 1.3E-63 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 C3497_02955 112b471e98ce86479de11197fe2784a2 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 40 3.6E-7 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 C3497_02955 112b471e98ce86479de11197fe2784a2 196 Gene3D G3DSA:2.102.10.10 43 192 3.5E-47 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3497_02955 112b471e98ce86479de11197fe2784a2 196 SUPERFAMILY SSF50022 30 190 3.93E-41 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 SUPERFAMILY SSF52540 138 439 1.08E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 Hamap MF_00195 GTPase Der [der]. 2 435 37.324 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 PIRSF PIRSF006485 1 440 7.3E-168 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 Gene3D G3DSA:3.40.50.300 171 346 2.0E-46 T 14-10-2018 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 SMART SM00382 175 316 3.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 Pfam PF01926 50S ribosome-binding GTPase 5 120 2.4E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 Pfam PF01926 50S ribosome-binding GTPase 178 296 6.8E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 Gene3D G3DSA:3.30.300.20 352 434 3.8E-18 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 Gene3D G3DSA:3.40.50.300 4 164 3.1E-42 T 14-10-2018 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.5E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.5E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 432 2.9E-23 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 SUPERFAMILY SSF52540 3 165 3.34E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 341 2.5E-26 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 2.9E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_02805 73b36c9f4d9a158730a84a6e953c70d6 442 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 432 5.4E-168 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 C3497_09280 a9a574b1a4dda8685ad240ba1e679f48 161 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 80 150 3.7E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) C3497_09280 a9a574b1a4dda8685ad240ba1e679f48 161 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 78 151 1.8E-32 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 C3497_09280 a9a574b1a4dda8685ad240ba1e679f48 161 Gene3D G3DSA:2.30.330.10 70 161 4.5E-34 T 14-10-2018 IPR036429 SpoA-like superfamily C3497_09280 a9a574b1a4dda8685ad240ba1e679f48 161 SUPERFAMILY SSF101801 78 159 1.83E-25 T 14-10-2018 IPR036429 SpoA-like superfamily C3497_09280 a9a574b1a4dda8685ad240ba1e679f48 161 PRINTS PR00956 Flagellar motor switch protein FliN signature 80 96 5.0E-29 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 C3497_09280 a9a574b1a4dda8685ad240ba1e679f48 161 PRINTS PR00956 Flagellar motor switch protein FliN signature 97 113 5.0E-29 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 C3497_09280 a9a574b1a4dda8685ad240ba1e679f48 161 PRINTS PR00956 Flagellar motor switch protein FliN signature 113 126 5.0E-29 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 C3497_09280 a9a574b1a4dda8685ad240ba1e679f48 161 PRINTS PR00956 Flagellar motor switch protein FliN signature 126 141 5.0E-29 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 C3497_11810 137f47a54d09c2e821650837b176169b 748 SUPERFAMILY SSF55904 604 747 5.89E-47 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 C3497_11810 137f47a54d09c2e821650837b176169b 748 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 582 1.5E-148 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 C3497_11810 137f47a54d09c2e821650837b176169b 748 PIRSF PIRSF009393 1 748 6.8E-280 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 C3497_11810 137f47a54d09c2e821650837b176169b 748 Gene3D G3DSA:3.90.1150.10 457 628 9.0E-70 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_11810 137f47a54d09c2e821650837b176169b 748 Gene3D G3DSA:3.40.50.2300 5 148 1.3E-22 T 14-10-2018 C3497_11810 137f47a54d09c2e821650837b176169b 748 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 390 404 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 C3497_11810 137f47a54d09c2e821650837b176169b 748 Gene3D G3DSA:3.40.640.10 149 454 1.3E-94 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_11810 137f47a54d09c2e821650837b176169b 748 Gene3D G3DSA:3.90.100.10 629 748 1.0E-40 T 14-10-2018 C3497_11810 137f47a54d09c2e821650837b176169b 748 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 609 734 1.1E-47 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 C3497_11810 137f47a54d09c2e821650837b176169b 748 SUPERFAMILY SSF53383 149 602 1.81E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_11810 137f47a54d09c2e821650837b176169b 748 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 143 3.7E-39 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 C3497_01765 ad7d7f4b1d81c7e5d66654e663379129 468 Gene3D G3DSA:3.30.70.2740 343 424 7.6E-13 T 14-10-2018 C3497_01765 ad7d7f4b1d81c7e5d66654e663379129 468 Pfam PF02913 FAD linked oxidases, C-terminal domain 224 464 7.4E-67 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C3497_01765 ad7d7f4b1d81c7e5d66654e663379129 468 SUPERFAMILY SSF56176 12 224 8.88E-69 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3497_01765 ad7d7f4b1d81c7e5d66654e663379129 468 Gene3D G3DSA:1.10.45.10 425 465 4.6E-13 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 C3497_01765 ad7d7f4b1d81c7e5d66654e663379129 468 SUPERFAMILY SSF55103 227 467 6.7E-74 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C3497_01765 ad7d7f4b1d81c7e5d66654e663379129 468 Gene3D G3DSA:3.30.465.40 31 240 3.4E-74 T 14-10-2018 C3497_01765 ad7d7f4b1d81c7e5d66654e663379129 468 Pfam PF01565 FAD binding domain 50 187 9.5E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 Gene3D G3DSA:3.40.50.300 9 446 1.6E-114 T 14-10-2018 C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 SUPERFAMILY SSF52540 13 840 8.64E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1217 20.01 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 SUPERFAMILY SSF52980 938 1217 1.61E-67 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 Gene3D G3DSA:3.90.320.10 934 1224 1.4E-85 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 Gene3D G3DSA:1.10.3170.10 152 359 1.6E-114 T 14-10-2018 C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1216 1.2E-251 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 Pfam PF13361 UvrD-like helicase C-terminal domain 741 834 2.3E-9 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 Gene3D G3DSA:1.10.486.10 598 740 2.9E-117 T 14-10-2018 C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 Pfam PF12705 PD-(D/E)XK nuclease superfamily 989 1184 1.1E-8 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 Gene3D G3DSA:3.40.50.300 457 865 2.9E-117 T 14-10-2018 C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 154 9.3E-26 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C3497_13585 babc4e573fa67b2cbe05bb56343e39a9 1225 Pfam PF00580 UvrD/REP helicase N-terminal domain 334 447 1.8E-27 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 343 2.7E-124 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 439 488 3.7E-16 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 366 414 5.3E-18 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Gene3D G3DSA:1.10.150.20 430 488 2.7E-21 T 14-10-2018 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 SMART SM00316 135 201 3.7E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 SUPERFAMILY SSF54814 280 343 1.18E-14 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Gene3D G3DSA:1.10.150.20 353 422 2.5E-27 T 14-10-2018 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Pfam PF00575 S1 RNA binding domain 140 196 2.7E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 SMART SM00322 302 361 0.35 T 14-10-2018 IPR004087 K Homology domain GO:0003676 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 SMART SM00322 231 294 14.0 T 14-10-2018 IPR004087 K Homology domain GO:0003676 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Pfam PF13184 NusA-like KH domain 231 298 6.6E-25 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 SUPERFAMILY SSF54814 201 278 2.68E-29 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Gene3D G3DSA:3.30.300.20 280 348 8.4E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 SUPERFAMILY SSF69705 1 128 1.03E-38 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Pfam PF08529 NusA N-terminal domain 4 126 5.3E-36 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Pfam PF14520 Helix-hairpin-helix domain 431 485 3.3E-10 T 14-10-2018 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Gene3D G3DSA:2.40.50.140 139 199 1.6E-21 T 14-10-2018 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 411 29.184 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 SUPERFAMILY SSF47794 357 417 2.04E-15 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Gene3D G3DSA:3.30.1480.10 1 131 3.6E-41 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 Gene3D G3DSA:3.30.300.20 200 278 7.5E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 SUPERFAMILY SSF50249 136 200 8.09E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_05255 c4c4c4d706d9e3b6711d252144553b21 491 SUPERFAMILY SSF47794 428 489 3.61E-14 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 C3497_11385 fb1d202be70e451937afd3d7a71721f7 132 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 8 112 33.34 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 C3497_11385 fb1d202be70e451937afd3d7a71721f7 132 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 34 108 3.7E-37 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 C3497_11385 fb1d202be70e451937afd3d7a71721f7 132 Gene3D G3DSA:3.10.20.400 2 99 2.1E-41 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 C3497_11385 fb1d202be70e451937afd3d7a71721f7 132 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 57 112 5.0E-24 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 C3497_11385 fb1d202be70e451937afd3d7a71721f7 132 SUPERFAMILY SSF141734 7 117 3.01E-50 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 C3497_07105 7b5322a5a9add600212bb97fd8b8a5cd 331 SUPERFAMILY SSF51621 28 265 2.09E-41 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3497_07105 7b5322a5a9add600212bb97fd8b8a5cd 331 Gene3D G3DSA:3.20.20.60 1 268 2.8E-103 T 14-10-2018 C3497_07105 7b5322a5a9add600212bb97fd8b8a5cd 331 PIRSF PIRSF015582 6 323 6.6E-46 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like C3497_07105 7b5322a5a9add600212bb97fd8b8a5cd 331 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 52 242 1.6E-11 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 C3497_13810 4ad9737f642be8968924d69589ab22e5 338 Gene3D G3DSA:3.40.50.300 5 170 2.1E-46 T 14-10-2018 C3497_13810 4ad9737f642be8968924d69589ab22e5 338 SMART SM00382 30 173 2.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_13810 4ad9737f642be8968924d69589ab22e5 338 SUPERFAMILY SSF52540 6 285 3.6E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13810 4ad9737f642be8968924d69589ab22e5 338 Gene3D G3DSA:1.10.8.80 215 294 4.9E-20 T 14-10-2018 C3497_13810 4ad9737f642be8968924d69589ab22e5 338 Pfam PF01078 Magnesium chelatase, subunit ChlI 79 151 1.6E-10 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain C3497_12255 00ef834a3803f6aa7ebf929ea1f5c98d 165 PIRSF PIRSF001399 16 163 6.1E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3497_12255 00ef834a3803f6aa7ebf929ea1f5c98d 165 Gene3D G3DSA:3.40.50.9100 4 165 2.1E-67 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3497_12255 00ef834a3803f6aa7ebf929ea1f5c98d 165 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 165 73.501 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3497_12255 00ef834a3803f6aa7ebf929ea1f5c98d 165 Pfam PF01220 Dehydroquinase class II 19 156 3.4E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3497_12255 00ef834a3803f6aa7ebf929ea1f5c98d 165 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 20 159 9.0E-59 T 14-10-2018 C3497_12255 00ef834a3803f6aa7ebf929ea1f5c98d 165 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 19 158 5.1E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3497_12255 00ef834a3803f6aa7ebf929ea1f5c98d 165 ProSitePatterns PS01029 Dehydroquinase class II signature. 23 40 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3497_12255 00ef834a3803f6aa7ebf929ea1f5c98d 165 SUPERFAMILY SSF52304 19 162 6.54E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3497_04615 a7491b86b98b69521078f083434181bc 461 Gene3D G3DSA:3.40.50.720 138 254 4.6E-6 T 14-10-2018 C3497_04615 a7491b86b98b69521078f083434181bc 461 Pfam PF13727 CoA-binding domain 63 209 2.3E-8 T 14-10-2018 C3497_04615 a7491b86b98b69521078f083434181bc 461 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 22 460 7.1E-156 T 14-10-2018 IPR017464 Sugar transferase, PEP-CTERM system associated C3497_04615 a7491b86b98b69521078f083434181bc 461 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 19 460 4.9E-127 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase C3497_04615 a7491b86b98b69521078f083434181bc 461 Pfam PF02397 Bacterial sugar transferase 272 455 2.3E-65 T 14-10-2018 IPR003362 Bacterial sugar transferase C3497_05085 919f0695980285335869c9f64f658df8 598 SUPERFAMILY SSF58104 117 428 5.62E-63 T 14-10-2018 C3497_05085 919f0695980285335869c9f64f658df8 598 SMART SM00304 257 317 16.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05085 919f0695980285335869c9f64f658df8 598 SMART SM00304 191 244 30.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05085 919f0695980285335869c9f64f658df8 598 SMART SM00304 95 149 3.1E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05085 919f0695980285335869c9f64f658df8 598 Pfam PF00672 HAMP domain 96 145 5.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05085 919f0695980285335869c9f64f658df8 598 Gene3D G3DSA:1.10.287.950 95 427 6.8E-66 T 14-10-2018 C3497_05085 919f0695980285335869c9f64f658df8 598 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 237 391 8.6E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_05085 919f0695980285335869c9f64f658df8 598 SMART SM00283 164 425 5.5E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_13705 37d257a1f05835e00ae5904f04ecd3a9 642 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 496 524 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 C3497_13705 37d257a1f05835e00ae5904f04ecd3a9 642 SUPERFAMILY SSF48435 24 471 1.06E-103 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 C3497_13705 37d257a1f05835e00ae5904f04ecd3a9 642 Gene3D G3DSA:1.10.530.10 469 631 2.2E-42 T 14-10-2018 C3497_13705 37d257a1f05835e00ae5904f04ecd3a9 642 SUPERFAMILY SSF53955 474 633 1.76E-44 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_13705 37d257a1f05835e00ae5904f04ecd3a9 642 Gene3D G3DSA:1.25.20.10 27 382 3.0E-71 T 14-10-2018 C3497_13705 37d257a1f05835e00ae5904f04ecd3a9 642 Pfam PF01464 Transglycosylase SLT domain 484 586 9.0E-21 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3497_13705 37d257a1f05835e00ae5904f04ecd3a9 642 Pfam PF14718 Soluble lytic murein transglycosylase L domain 402 463 3.0E-9 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 C3497_04430 c5a5e61f1d0bd7e6599a1619e020af6b 161 Pfam PF12838 4Fe-4S dicluster domain 61 115 1.6E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_04430 c5a5e61f1d0bd7e6599a1619e020af6b 161 SUPERFAMILY SSF54862 35 143 4.6E-27 T 14-10-2018 C3497_04430 c5a5e61f1d0bd7e6599a1619e020af6b 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_04430 c5a5e61f1d0bd7e6599a1619e020af6b 161 Gene3D G3DSA:3.30.70.3270 35 161 1.8E-39 T 14-10-2018 C3497_04430 c5a5e61f1d0bd7e6599a1619e020af6b 161 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 18 139 2.6E-47 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04430 c5a5e61f1d0bd7e6599a1619e020af6b 161 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 9 158 28.388 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_11020 952689da424bca8fc32a738d70c129d8 467 SUPERFAMILY SSF47384 226 308 1.29E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_11020 952689da424bca8fc32a738d70c129d8 467 SMART SM00387 351 462 1.2E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_11020 952689da424bca8fc32a738d70c129d8 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 307 2.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_11020 952689da424bca8fc32a738d70c129d8 467 Gene3D G3DSA:3.30.565.10 313 465 1.2E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_11020 952689da424bca8fc32a738d70c129d8 467 SMART SM00304 188 241 1.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_11020 952689da424bca8fc32a738d70c129d8 467 Gene3D G3DSA:1.10.287.130 192 309 6.2E-21 T 14-10-2018 C3497_11020 952689da424bca8fc32a738d70c129d8 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 460 4.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_11020 952689da424bca8fc32a738d70c129d8 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 9.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11020 952689da424bca8fc32a738d70c129d8 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 9.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11020 952689da424bca8fc32a738d70c129d8 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 9.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_11020 952689da424bca8fc32a738d70c129d8 467 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 6 459 5.6E-143 T 14-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 C3497_11020 952689da424bca8fc32a738d70c129d8 467 SUPERFAMILY SSF55874 297 460 9.82E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_11020 952689da424bca8fc32a738d70c129d8 467 SMART SM00388 242 308 1.1E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_01430 4f6204c36992d636e6790788270dffc8 902 TIGRFAM TIGR00593 pola: DNA polymerase I 4 902 3.1E-278 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 SUPERFAMILY SSF88723 1 165 3.92E-54 T 14-10-2018 IPR029060 PIN-like domain superfamily C3497_01430 4f6204c36992d636e6790788270dffc8 902 SMART SM00482 660 866 5.6E-118 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 ProSitePatterns PS00447 DNA polymerase family A signature. 728 747 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 SUPERFAMILY SSF47807 166 278 1.64E-32 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily C3497_01430 4f6204c36992d636e6790788270dffc8 902 Gene3D G3DSA:1.10.150.20 683 826 5.0E-109 T 14-10-2018 C3497_01430 4f6204c36992d636e6790788270dffc8 902 SMART SM00279 168 203 1.0E-11 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 C3497_01430 4f6204c36992d636e6790788270dffc8 902 SMART SM00474 305 491 2.1E-32 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C3497_01430 4f6204c36992d636e6790788270dffc8 902 Gene3D G3DSA:3.30.420.10 303 516 4.2E-65 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_01430 4f6204c36992d636e6790788270dffc8 902 SMART SM00475 1 256 3.7E-118 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 C3497_01430 4f6204c36992d636e6790788270dffc8 902 SUPERFAMILY SSF56672 497 902 3.34E-158 T 14-10-2018 C3497_01430 4f6204c36992d636e6790788270dffc8 902 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 259 1.0E-27 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 C3497_01430 4f6204c36992d636e6790788270dffc8 902 Gene3D G3DSA:1.10.150.20 169 241 1.3E-90 T 14-10-2018 C3497_01430 4f6204c36992d636e6790788270dffc8 902 Gene3D G3DSA:3.40.50.1010 4 272 1.3E-90 T 14-10-2018 C3497_01430 4f6204c36992d636e6790788270dffc8 902 Gene3D G3DSA:3.30.70.370 638 898 5.0E-109 T 14-10-2018 C3497_01430 4f6204c36992d636e6790788270dffc8 902 Gene3D G3DSA:1.20.1060.10 517 632 9.6E-43 T 14-10-2018 C3497_01430 4f6204c36992d636e6790788270dffc8 902 SUPERFAMILY SSF53098 304 490 1.07E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_01430 4f6204c36992d636e6790788270dffc8 902 Pfam PF00476 DNA polymerase family A 526 900 4.9E-152 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 Pfam PF01612 3'-5' exonuclease 308 490 2.4E-34 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C3497_01430 4f6204c36992d636e6790788270dffc8 902 PRINTS PR00868 DNA-polymerase family A (pol I) signature 652 667 4.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 PRINTS PR00868 DNA-polymerase family A (pol I) signature 849 862 4.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 PRINTS PR00868 DNA-polymerase family A (pol I) signature 674 697 4.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 PRINTS PR00868 DNA-polymerase family A (pol I) signature 787 798 4.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 PRINTS PR00868 DNA-polymerase family A (pol I) signature 728 753 4.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 PRINTS PR00868 DNA-polymerase family A (pol I) signature 629 651 4.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 PRINTS PR00868 DNA-polymerase family A (pol I) signature 704 717 4.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 PRINTS PR00868 DNA-polymerase family A (pol I) signature 819 835 4.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 PRINTS PR00868 DNA-polymerase family A (pol I) signature 765 776 4.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_01430 4f6204c36992d636e6790788270dffc8 902 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 9.2E-49 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 C3497_04775 f259b044a083b5ea02d682eb0ec73d4a 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 28.128 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_04775 f259b044a083b5ea02d682eb0ec73d4a 103 SUPERFAMILY SSF141091 1 102 2.09E-39 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_04775 f259b044a083b5ea02d682eb0ec73d4a 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_04775 f259b044a083b5ea02d682eb0ec73d4a 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 5.9E-42 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_04775 f259b044a083b5ea02d682eb0ec73d4a 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.2E-38 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_13915 e89be67665053ba1d68d4545c0094704 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 3.5E-83 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 C3497_13915 e89be67665053ba1d68d4545c0094704 210 Gene3D G3DSA:3.40.50.2020 2 208 4.0E-68 T 14-10-2018 C3497_13915 e89be67665053ba1d68d4545c0094704 210 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 1.2E-61 T 14-10-2018 C3497_13915 e89be67665053ba1d68d4545c0094704 210 SUPERFAMILY SSF53271 5 206 6.11E-62 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3497_13915 e89be67665053ba1d68d4545c0094704 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.353 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 C3497_07030 9fc9e14b18f052d09b57197a0d278588 651 Gene3D G3DSA:3.40.50.300 21 282 1.2E-47 T 14-10-2018 C3497_07030 9fc9e14b18f052d09b57197a0d278588 651 SMART SM00491 481 615 3.8E-39 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 C3497_07030 9fc9e14b18f052d09b57197a0d278588 651 SUPERFAMILY SSF52540 467 612 7.09E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07030 9fc9e14b18f052d09b57197a0d278588 651 Gene3D G3DSA:3.40.50.300 449 644 1.3E-37 T 14-10-2018 C3497_07030 9fc9e14b18f052d09b57197a0d278588 651 Pfam PF13307 Helicase C-terminal domain 466 628 2.3E-33 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 C3497_07030 9fc9e14b18f052d09b57197a0d278588 651 SUPERFAMILY SSF52540 16 612 4.1E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07135 147ac5973089fd75bef4bf67b7c884f0 251 Gene3D G3DSA:3.40.50.150 6 238 3.0E-43 T 14-10-2018 C3497_07135 147ac5973089fd75bef4bf67b7c884f0 251 SUPERFAMILY SSF53335 5 227 5.56E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_07135 147ac5973089fd75bef4bf67b7c884f0 251 Pfam PF01564 Spermine/spermidine synthase domain 41 163 1.1E-7 T 14-10-2018 C3497_08000 4d22dc4dafe422de2a7afd3f3e533e25 359 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 345 4.3E-112 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 C3497_08000 4d22dc4dafe422de2a7afd3f3e533e25 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 347 1.5E-59 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 C3497_11940 cadd99a0b1524d7a22035d0f6fa55783 264 Gene3D G3DSA:3.40.50.10090 43 177 1.3E-75 T 14-10-2018 C3497_11940 cadd99a0b1524d7a22035d0f6fa55783 264 Pfam PF02602 Uroporphyrinogen-III synthase HemD 25 250 3.2E-44 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11940 cadd99a0b1524d7a22035d0f6fa55783 264 SUPERFAMILY SSF69618 11 257 9.16E-53 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3497_11940 cadd99a0b1524d7a22035d0f6fa55783 264 Gene3D G3DSA:3.40.50.10090 14 246 1.3E-75 T 14-10-2018 C3497_06200 0c274b5deaefb8079db9e9cf60c5e46a 461 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 2 430 5.2E-180 T 14-10-2018 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0009399|GO:0065003 C3497_06200 0c274b5deaefb8079db9e9cf60c5e46a 461 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 37 44 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C3497_06200 0c274b5deaefb8079db9e9cf60c5e46a 461 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 19 430 9.0E-111 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 C3497_06200 0c274b5deaefb8079db9e9cf60c5e46a 461 Gene3D G3DSA:3.40.50.1980 312 434 5.7E-34 T 14-10-2018 C3497_06200 0c274b5deaefb8079db9e9cf60c5e46a 461 Gene3D G3DSA:3.40.50.1980 163 285 1.2E-36 T 14-10-2018 C3497_06200 0c274b5deaefb8079db9e9cf60c5e46a 461 Gene3D G3DSA:3.40.50.1980 19 162 8.5E-37 T 14-10-2018 C3497_06200 0c274b5deaefb8079db9e9cf60c5e46a 461 SUPERFAMILY SSF53807 8 443 2.16E-121 T 14-10-2018 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 Pfam PF13180 PDZ domain 285 374 6.1E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 SUPERFAMILY SSF50494 47 277 2.71E-64 T 14-10-2018 IPR009003 Peptidase S1, PA clan C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 Pfam PF13365 Trypsin-like peptidase domain 113 246 6.7E-34 T 14-10-2018 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 SUPERFAMILY SSF50156 243 367 1.28E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 SMART SM00228 285 367 2.3E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 SMART SM00228 397 479 1.4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 49 484 3.1E-136 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 PRINTS PR00834 HtrA/DegQ protease family signature 183 207 2.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 PRINTS PR00834 HtrA/DegQ protease family signature 325 337 2.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 PRINTS PR00834 HtrA/DegQ protease family signature 122 134 2.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 PRINTS PR00834 HtrA/DegQ protease family signature 143 163 2.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 2.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 PRINTS PR00834 HtrA/DegQ protease family signature 239 256 2.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 Gene3D G3DSA:2.40.10.120 47 278 9.5E-79 T 14-10-2018 C3497_05510 be4ce7e13d87b234941d00d0427d98d1 490 Gene3D G3DSA:2.30.42.10 280 386 6.9E-26 T 14-10-2018 C3497_08850 117574cbeecd96c8b728b0f14f2a7920 510 PIRSF PIRSF001394 1 510 1.5E-220 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 C3497_08850 117574cbeecd96c8b728b0f14f2a7920 510 Pfam PF05683 Fumarase C-terminus 292 493 6.2E-82 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 C3497_08850 117574cbeecd96c8b728b0f14f2a7920 510 Gene3D G3DSA:3.20.130.10 308 493 4.1E-60 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 C3497_08850 117574cbeecd96c8b728b0f14f2a7920 510 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 330 492 2.1E-48 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 C3497_08850 117574cbeecd96c8b728b0f14f2a7920 510 Pfam PF05681 Fumarate hydratase (Fumerase) 11 288 4.1E-103 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 C3497_08850 117574cbeecd96c8b728b0f14f2a7920 510 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 287 6.6E-65 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 C3497_08850 117574cbeecd96c8b728b0f14f2a7920 510 SUPERFAMILY SSF117457 321 491 5.62E-63 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 C3497_05345 bd4a5e4b24a176b6fe9c7657043171b0 179 SUPERFAMILY SSF160387 61 178 1.36E-35 T 14-10-2018 C3497_05345 bd4a5e4b24a176b6fe9c7657043171b0 179 Gene3D G3DSA:3.30.70.2050 121 178 4.4E-12 T 14-10-2018 C3497_05345 bd4a5e4b24a176b6fe9c7657043171b0 179 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 8 28 1.9E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal C3497_05345 bd4a5e4b24a176b6fe9c7657043171b0 179 Gene3D G3DSA:3.30.70.2060 61 120 3.0E-15 T 14-10-2018 C3497_05345 bd4a5e4b24a176b6fe9c7657043171b0 179 Pfam PF05573 NosL 22 167 1.8E-54 T 14-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 SMART SM00448 345 458 2.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 492 656 2.2E-51 T 14-10-2018 IPR000160 GGDEF domain C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 SUPERFAMILY SSF52172 345 491 3.27E-30 T 14-10-2018 IPR011006 CheY-like superfamily C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 Gene3D G3DSA:1.10.3210.10 16 275 6.9E-63 T 14-10-2018 C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 Pfam PF00072 Response regulator receiver domain 348 458 1.8E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 SMART SM00267 485 657 9.5E-64 T 14-10-2018 IPR000160 GGDEF domain C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 SUPERFAMILY SSF109604 13 285 3.14E-48 T 14-10-2018 C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 SUPERFAMILY SSF55073 501 656 6.28E-49 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 Gene3D G3DSA:3.30.70.270 493 660 4.8E-56 T 14-10-2018 C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 Pfam PF00990 Diguanylate cyclase, GGDEF domain 496 653 7.0E-46 T 14-10-2018 IPR000160 GGDEF domain C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 Gene3D G3DSA:3.40.50.2300 345 492 7.2E-26 T 14-10-2018 C3497_05905 5d6153eb3cb0fb3e9cce6f92bf267a9e 661 Pfam PF08668 HDOD domain 19 214 2.4E-44 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_01335 578ef379938fe364382d540589271ccf 294 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 3 79 3.6E-18 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 C3497_01335 578ef379938fe364382d540589271ccf 294 Gene3D G3DSA:1.10.443.10 102 281 1.2E-57 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3497_01335 578ef379938fe364382d540589271ccf 294 SUPERFAMILY SSF56349 7 280 4.71E-54 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3497_01335 578ef379938fe364382d540589271ccf 294 Gene3D G3DSA:1.10.150.130 1 89 5.0E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3497_01335 578ef379938fe364382d540589271ccf 294 Pfam PF00589 Phage integrase family 103 273 7.3E-44 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3497_01335 578ef379938fe364382d540589271ccf 294 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 287 56.274 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD C3497_01335 578ef379938fe364382d540589271ccf 294 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 3 289 3.9E-105 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 SUPERFAMILY SSF74731 2 115 4.06E-49 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.993 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 8.6E-50 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 8.0E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 8.0E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 8.0E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 5.0E-14 T 14-10-2018 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 Gene3D G3DSA:1.10.720.90 2 55 3.2E-26 T 14-10-2018 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 Pfam PF00453 Ribosomal protein L20 3 109 2.0E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_09490 7f5d3090e633f8efcb72d279fb4fcc9e 119 Gene3D G3DSA:1.10.1900.20 56 119 3.2E-27 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_11320 a58540a2d9029a84d0f98651d96dd783 239 Pfam PF00498 FHA domain 23 86 9.7E-21 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C3497_11320 a58540a2d9029a84d0f98651d96dd783 239 SUPERFAMILY SSF49879 156 236 2.87E-9 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 C3497_11320 a58540a2d9029a84d0f98651d96dd783 239 SUPERFAMILY SSF49879 3 94 1.01E-28 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 C3497_11320 a58540a2d9029a84d0f98651d96dd783 239 SMART SM00240 22 72 8.8E-17 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C3497_11320 a58540a2d9029a84d0f98651d96dd783 239 Gene3D G3DSA:2.60.200.20 3 97 1.1E-27 T 14-10-2018 C3497_08930 5c1e3a80c35e0b1dbc4335ccebf7a343 618 SUPERFAMILY SSF53300 431 606 3.71E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C3497_08930 5c1e3a80c35e0b1dbc4335ccebf7a343 618 SMART SM00327 427 617 1.3E-14 T 14-10-2018 IPR002035 von Willebrand factor, type A C3497_08930 5c1e3a80c35e0b1dbc4335ccebf7a343 618 Gene3D G3DSA:3.40.50.410 428 586 8.2E-11 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C3497_01870 9dcb224d84b0160bffdf4a07f300f38a 101 Pfam PF00276 Ribosomal protein L23 11 97 4.9E-30 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 C3497_01870 9dcb224d84b0160bffdf4a07f300f38a 101 Gene3D G3DSA:3.30.70.330 4 101 4.6E-34 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily C3497_01870 9dcb224d84b0160bffdf4a07f300f38a 101 SUPERFAMILY SSF54189 4 95 1.12E-29 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01870 9dcb224d84b0160bffdf4a07f300f38a 101 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 10 100 22.3 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 C3497_09565 ebee64d2fab4885d296df48ffd530786 295 Gene3D G3DSA:1.10.3660.10 181 287 9.1E-36 T 14-10-2018 C3497_09565 ebee64d2fab4885d296df48ffd530786 295 SUPERFAMILY SSF48179 178 285 3.06E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_09565 ebee64d2fab4885d296df48ffd530786 295 Pfam PF02153 Prephenate dehydrogenase 19 276 2.5E-75 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 C3497_09565 ebee64d2fab4885d296df48ffd530786 295 Gene3D G3DSA:3.40.50.720 4 180 6.1E-56 T 14-10-2018 C3497_09565 ebee64d2fab4885d296df48ffd530786 295 SUPERFAMILY SSF51735 6 173 2.69E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_07265 85d802cd594fbb1ea8403142cb9f44a3 297 SUPERFAMILY SSF56300 13 251 3.8E-32 T 14-10-2018 C3497_07265 85d802cd594fbb1ea8403142cb9f44a3 297 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 16 229 5.0E-12 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 C3497_07265 85d802cd594fbb1ea8403142cb9f44a3 297 Gene3D G3DSA:3.60.21.10 12 248 6.7E-20 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C3497_12280 d56dceb43f715887c4f33722b53bb234 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 19 120 1.4E-34 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 C3497_12280 d56dceb43f715887c4f33722b53bb234 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 73 84 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 C3497_12280 d56dceb43f715887c4f33722b53bb234 122 Gene3D G3DSA:1.10.3830.10 6 122 1.8E-38 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 C3497_03615 e4d3cbc4ebf33157c6e189e923bf0a73 453 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 54 383 2.1E-98 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 C3497_03615 e4d3cbc4ebf33157c6e189e923bf0a73 453 SMART SM00245 174 380 1.1E-67 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 C3497_03615 e4d3cbc4ebf33157c6e189e923bf0a73 453 SMART SM00228 101 172 6.7E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_03615 e4d3cbc4ebf33157c6e189e923bf0a73 453 Gene3D G3DSA:3.90.226.10 189 377 1.1E-91 T 14-10-2018 C3497_03615 e4d3cbc4ebf33157c6e189e923bf0a73 453 SUPERFAMILY SSF52096 34 385 1.82E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_03615 e4d3cbc4ebf33157c6e189e923bf0a73 453 Gene3D G3DSA:2.30.42.10 101 188 1.1E-91 T 14-10-2018 C3497_03615 e4d3cbc4ebf33157c6e189e923bf0a73 453 Pfam PF13180 PDZ domain 101 180 2.0E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_03615 e4d3cbc4ebf33157c6e189e923bf0a73 453 Gene3D G3DSA:3.30.750.44 47 355 1.1E-91 T 14-10-2018 C3497_03615 e4d3cbc4ebf33157c6e189e923bf0a73 453 Pfam PF03572 Peptidase family S41 200 379 6.4E-55 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 C3497_03615 e4d3cbc4ebf33157c6e189e923bf0a73 453 SUPERFAMILY SSF50156 90 184 5.5E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3497_10800 207169184318d6c19b531df8d8dd54a9 301 PIRSF PIRSF011468 5 300 1.3E-146 T 14-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_10800 207169184318d6c19b531df8d8dd54a9 301 Pfam PF06007 Phosphonate metabolism protein PhnJ 13 290 4.0E-138 T 14-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 28 640 7.7E-192 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 Gene3D G3DSA:3.30.1370.120 18 181 2.3E-58 T 14-10-2018 IPR038591 NolW-like superfamily C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 Pfam PF03958 Bacterial type II/III secretion system short domain 266 374 2.1E-17 T 14-10-2018 IPR005644 NolW-like C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 Pfam PF03958 Bacterial type II/III secretion system short domain 124 183 4.1E-11 T 14-10-2018 IPR005644 NolW-like C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 Pfam PF03958 Bacterial type II/III secretion system short domain 186 261 1.2E-13 T 14-10-2018 IPR005644 NolW-like C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 Pfam PF00263 Bacterial type II and III secretion system protein 465 631 8.2E-51 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 595 613 1.0E-31 T 14-10-2018 IPR001775 GspD/PilQ family C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 495 505 1.0E-31 T 14-10-2018 IPR001775 GspD/PilQ family C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 618 632 1.0E-31 T 14-10-2018 IPR001775 GspD/PilQ family C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 460 484 1.0E-31 T 14-10-2018 IPR001775 GspD/PilQ family C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 374 384 1.0E-31 T 14-10-2018 IPR001775 GspD/PilQ family C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 PRINTS PR01032 Gene IV protein signature 485 508 5.0E-10 T 14-10-2018 C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 PRINTS PR01032 Gene IV protein signature 558 586 5.0E-10 T 14-10-2018 C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 Gene3D G3DSA:3.30.1370.120 263 372 1.1E-14 T 14-10-2018 IPR038591 NolW-like superfamily C3497_07610 b1f3c4bdaec32346fc38513a9da1af97 713 Gene3D G3DSA:3.30.1370.120 183 260 9.3E-13 T 14-10-2018 IPR038591 NolW-like superfamily C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Pfam PF04565 RNA polymerase Rpb2, domain 3 538 605 1.1E-31 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1373 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Pfam PF10385 RNA polymerase beta subunit external 1 domain 616 681 6.1E-24 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Gene3D G3DSA:3.90.1110.10 315 467 2.6E-27 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Pfam PF00562 RNA polymerase Rpb2, domain 6 744 1299 3.9E-164 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Gene3D G3DSA:2.40.270.10 1071 1277 1.2E-86 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Gene3D G3DSA:3.90.1800.10 1287 1351 6.5E-11 T 14-10-2018 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1101 1113 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Pfam PF04563 RNA polymerase beta subunit 27 525 8.0E-39 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Gene3D G3DSA:2.40.50.150 858 976 2.0E-43 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Pfam PF04560 RNA polymerase Rpb2, domain 7 1301 1374 1.8E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Gene3D G3DSA:2.40.270.10 815 857 3.4E-7 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Gene3D G3DSA:2.40.50.100 739 813 6.1E-29 T 14-10-2018 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 236 3.0E-8 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Pfam PF04561 RNA polymerase Rpb2, domain 2 445 479 2.3E-6 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Gene3D G3DSA:3.90.1100.10 468 651 6.6E-72 T 14-10-2018 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1377 12.325 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 SUPERFAMILY SSF64484 12 1374 0.0 T 14-10-2018 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Gene3D G3DSA:3.90.1100.10 18 175 1.5E-53 T 14-10-2018 C3497_01825 0922ffe4f0beb8d291c3a76340efecbd 1377 Gene3D G3DSA:3.90.1100.10 667 738 1.8E-21 T 14-10-2018 C3497_05975 8bac01181efe848e0df7fae19f4dee77 281 Pfam PF04344 Chemotaxis phosphatase, CheZ 84 281 1.2E-78 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 C3497_05975 8bac01181efe848e0df7fae19f4dee77 281 PIRSF PIRSF002884 67 281 8.4E-77 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 C3497_05975 8bac01181efe848e0df7fae19f4dee77 281 Gene3D G3DSA:1.10.287.500 103 236 3.0E-50 T 14-10-2018 C3497_05975 8bac01181efe848e0df7fae19f4dee77 281 SUPERFAMILY SSF75708 78 280 3.14E-64 T 14-10-2018 C3497_11265 3f782af43c28789199136695e127db27 556 Gene3D G3DSA:3.30.420.10 163 373 6.2E-33 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_11265 3f782af43c28789199136695e127db27 556 Pfam PF00665 Integrase core domain 169 303 5.4E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3497_11265 3f782af43c28789199136695e127db27 556 SUPERFAMILY SSF53098 165 361 6.83E-21 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_11265 3f782af43c28789199136695e127db27 556 Pfam PF09299 Mu transposase, C-terminal 391 449 9.9E-14 T 14-10-2018 IPR015378 Transposase-like, Mu, C-terminal C3497_11265 3f782af43c28789199136695e127db27 556 SUPERFAMILY SSF50610 390 449 3.27E-6 T 14-10-2018 IPR009004 Transposase, Mu, C-terminal C3497_11265 3f782af43c28789199136695e127db27 556 Pfam PF09039 Mu DNA binding, I gamma subdomain 68 155 3.5E-4 T 14-10-2018 IPR015126 Mu DNA binding, I gamma subdomain C3497_03960 16e2bd51e31d9025b07663aaf537ec68 471 Pfam PF02913 FAD linked oxidases, C-terminal domain 220 470 3.3E-53 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C3497_03960 16e2bd51e31d9025b07663aaf537ec68 471 Pfam PF01565 FAD binding domain 43 180 1.0E-33 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C3497_03960 16e2bd51e31d9025b07663aaf537ec68 471 Gene3D G3DSA:3.30.70.2190 220 343 1.7E-35 T 14-10-2018 C3497_03960 16e2bd51e31d9025b07663aaf537ec68 471 SUPERFAMILY SSF56176 6 220 4.36E-76 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3497_03960 16e2bd51e31d9025b07663aaf537ec68 471 Gene3D G3DSA:3.30.43.10 1 96 2.3E-26 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 C3497_03960 16e2bd51e31d9025b07663aaf537ec68 471 Gene3D G3DSA:3.30.70.2740 344 430 5.2E-30 T 14-10-2018 C3497_03960 16e2bd51e31d9025b07663aaf537ec68 471 Gene3D G3DSA:1.10.45.10 431 471 2.1E-19 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 C3497_03960 16e2bd51e31d9025b07663aaf537ec68 471 Gene3D G3DSA:3.30.465.10 98 219 6.7E-44 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3497_03960 16e2bd51e31d9025b07663aaf537ec68 471 SUPERFAMILY SSF55103 223 471 3.11E-57 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C3497_03390 d51ed7c90af9de9c741c4966ed2e4827 86 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 9 84 1.0E-28 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted C3497_03390 d51ed7c90af9de9c741c4966ed2e4827 86 Pfam PF13937 Domain of unknown function (DUF4212) 7 82 5.0E-27 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted C3497_14635 d48d5f3557899962d8aa9afa65db3659 224 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 205 1.3E-59 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3497_14635 d48d5f3557899962d8aa9afa65db3659 224 Pfam PF03099 Biotin/lipoate A/B protein ligase family 66 161 2.6E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 C3497_14635 d48d5f3557899962d8aa9afa65db3659 224 PIRSF PIRSF016262 3 217 1.3E-56 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3497_14635 d48d5f3557899962d8aa9afa65db3659 224 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 77 130 7.0E-18 T 14-10-2018 C3497_14635 d48d5f3557899962d8aa9afa65db3659 224 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 73 88 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 C3497_14635 d48d5f3557899962d8aa9afa65db3659 224 SUPERFAMILY SSF55681 3 208 4.23E-67 T 14-10-2018 C3497_14635 d48d5f3557899962d8aa9afa65db3659 224 Hamap MF_00013 Octanoyltransferase [lipB]. 4 208 37.643 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3497_14635 d48d5f3557899962d8aa9afa65db3659 224 Gene3D G3DSA:3.30.930.10 2 205 1.2E-61 T 14-10-2018 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Pfam PF03979 Sigma-70 factor, region 1.1 41 119 1.4E-27 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Pfam PF04542 Sigma-70 region 2 430 497 7.2E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Pfam PF04545 Sigma-70, region 4 596 649 1.1E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 SUPERFAMILY SSF88659 558 660 3.49E-27 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3497_12230 7302dde93556a9e820c15b6057a48edb 664 PRINTS PR00046 Major sigma-70 factor signature 636 647 4.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 PRINTS PR00046 Major sigma-70 factor signature 621 636 4.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 PRINTS PR00046 Major sigma-70 factor signature 476 484 4.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 PRINTS PR00046 Major sigma-70 factor signature 600 612 4.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 PRINTS PR00046 Major sigma-70 factor signature 452 465 4.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 28 661 43.348 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Gene3D G3DSA:1.10.10.10 501 576 3.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_12230 7302dde93556a9e820c15b6057a48edb 664 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 621 647 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 424 660 1.6E-119 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Gene3D G3DSA:1.10.10.10 578 662 1.7E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_12230 7302dde93556a9e820c15b6057a48edb 664 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 424 649 1.4E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 452 465 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Gene3D G3DSA:1.10.601.10 151 497 2.0E-132 T 14-10-2018 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 SUPERFAMILY SSF88659 501 574 8.34E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Pfam PF04546 Sigma-70, non-essential region 177 397 1.2E-65 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Pfam PF04539 Sigma-70 region 3 507 582 5.5E-25 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Gene3D G3DSA:1.10.220.120 38 100 5.5E-26 T 14-10-2018 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 SUPERFAMILY SSF88946 153 495 6.41E-99 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C3497_12230 7302dde93556a9e820c15b6057a48edb 664 Pfam PF00140 Sigma-70 factor, region 1.2 136 168 1.3E-13 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_10425 7161e756cf52c5df6ec3f0ed27525bf6 462 Pfam PF00501 AMP-binding enzyme 194 312 5.7E-8 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3497_10425 7161e756cf52c5df6ec3f0ed27525bf6 462 Gene3D G3DSA:3.40.50.12780 28 354 1.0E-88 T 14-10-2018 C3497_10425 7161e756cf52c5df6ec3f0ed27525bf6 462 SUPERFAMILY SSF56801 47 442 8.77E-25 T 14-10-2018 C3497_06680 944ec288027aae2d1a3a80a1ec0eb2ad 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 3 208 1.5E-15 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 C3497_06680 944ec288027aae2d1a3a80a1ec0eb2ad 221 Gene3D G3DSA:1.10.1760.20 2 206 4.0E-6 T 14-10-2018 C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 Pfam PF14622 Ribonuclease-III-like 16 135 2.1E-32 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 6 220 1.4E-68 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 Gene3D G3DSA:3.30.160.20 151 222 2.2E-19 T 14-10-2018 C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 SUPERFAMILY SSF54768 106 220 5.29E-25 T 14-10-2018 C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 SMART SM00535 18 146 3.6E-51 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 Pfam PF00035 Double-stranded RNA binding motif 153 220 2.7E-12 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 SUPERFAMILY SSF69065 2 155 2.62E-49 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 Gene3D G3DSA:1.10.1520.10 1 144 2.4E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 SMART SM00358 153 221 2.9E-19 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain C3497_05535 a6fe73a4c0201df850e6e4fff7a71c0a 223 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 28.638 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 C3497_02220 693021cb33051ef682e331cb52b5e7f3 170 Gene3D G3DSA:2.40.50.180 48 128 1.5E-7 T 14-10-2018 C3497_02220 693021cb33051ef682e331cb52b5e7f3 170 Pfam PF01584 CheW-like domain 29 161 1.0E-13 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_02220 693021cb33051ef682e331cb52b5e7f3 170 SUPERFAMILY SSF50341 21 162 2.22E-20 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C3497_02220 693021cb33051ef682e331cb52b5e7f3 170 SMART SM00260 24 159 0.0012 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 SUPERFAMILY SSF51905 6 427 3.93E-78 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 597 1.1E-239 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.6E-5 T 14-10-2018 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 382 389 2.6E-5 T 14-10-2018 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 PIRSF PIRSF000171 1 582 2.2E-45 T 14-10-2018 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 Gene3D G3DSA:3.50.50.60 9 415 1.3E-167 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 Gene3D G3DSA:3.90.700.10 246 349 1.3E-167 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 Gene3D G3DSA:1.20.58.100 433 547 4.8E-37 T 14-10-2018 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 SUPERFAMILY SSF46977 452 597 8.11E-43 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 389 3.8E-6 T 14-10-2018 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.8E-6 T 14-10-2018 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 Pfam PF00890 FAD binding domain 9 404 4.7E-122 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 SUPERFAMILY SSF56425 236 354 1.14E-44 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 Gene3D G3DSA:4.10.80.40 555 597 1.0E-5 T 14-10-2018 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 Pfam PF02910 Fumarate reductase flavoprotein C-term 462 597 5.2E-40 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07080 df5f21d2b7afb4af3d5c70b373d55b40 597 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 7 589 9.6E-288 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_03095 0e226daa33acfd39050a8aa7aad866b9 447 Pfam PF00209 Sodium:neurotransmitter symporter family 8 125 1.4E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3497_03095 0e226daa33acfd39050a8aa7aad866b9 447 Pfam PF00209 Sodium:neurotransmitter symporter family 147 445 3.1E-24 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3497_03095 0e226daa33acfd39050a8aa7aad866b9 447 SUPERFAMILY SSF161070 8 447 6.54E-130 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 C3497_03095 0e226daa33acfd39050a8aa7aad866b9 447 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 31 45 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3497_03095 0e226daa33acfd39050a8aa7aad866b9 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 447 3.1E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3497_03095 0e226daa33acfd39050a8aa7aad866b9 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 3.1E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3497_03095 0e226daa33acfd39050a8aa7aad866b9 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 304 323 3.1E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3497_03095 0e226daa33acfd39050a8aa7aad866b9 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 3.1E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3497_06195 406eb9f07c727ef9b04ff75286a5947f 142 SUPERFAMILY SSF53146 2 120 2.88E-27 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily C3497_06195 406eb9f07c727ef9b04ff75286a5947f 142 Gene3D G3DSA:3.30.420.130 1 121 1.9E-30 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily C3497_06195 406eb9f07c727ef9b04ff75286a5947f 142 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 105 1.7E-16 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis C3497_08165 9443be1b6d19300a649d603a86bf4589 100 Gene3D G3DSA:3.30.280.10 1 100 4.7E-49 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08165 9443be1b6d19300a649d603a86bf4589 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 7.4E-53 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08165 9443be1b6d19300a649d603a86bf4589 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.921 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08165 9443be1b6d19300a649d603a86bf4589 100 PIRSF PIRSF001223 1 100 1.4E-50 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08165 9443be1b6d19300a649d603a86bf4589 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-41 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08165 9443be1b6d19300a649d603a86bf4589 100 SUPERFAMILY SSF54111 1 99 6.54E-47 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08165 9443be1b6d19300a649d603a86bf4589 100 Pfam PF00547 Urease, gamma subunit 1 99 4.3E-48 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_00705 42e8670a65abd324495518aaf04f72da 362 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 3 350 5.6E-175 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 C3497_00705 42e8670a65abd324495518aaf04f72da 362 Gene3D G3DSA:3.40.50.700 44 224 7.2E-73 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily C3497_00705 42e8670a65abd324495518aaf04f72da 362 PIRSF PIRSF000310 3 354 3.4E-146 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 C3497_00705 42e8670a65abd324495518aaf04f72da 362 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 60 205 7.8E-31 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_00705 42e8670a65abd324495518aaf04f72da 362 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 43 2.9E-6 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal C3497_00705 42e8670a65abd324495518aaf04f72da 362 Gene3D G3DSA:4.10.480.10 227 337 1.2E-48 T 14-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily C3497_00705 42e8670a65abd324495518aaf04f72da 362 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 212 229 2.0E-121 T 14-10-2018 C3497_00705 42e8670a65abd324495518aaf04f72da 362 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 282 295 2.0E-121 T 14-10-2018 C3497_00705 42e8670a65abd324495518aaf04f72da 362 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 68 92 2.0E-121 T 14-10-2018 C3497_00705 42e8670a65abd324495518aaf04f72da 362 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 254 280 2.0E-121 T 14-10-2018 C3497_00705 42e8670a65abd324495518aaf04f72da 362 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 186 209 2.0E-121 T 14-10-2018 C3497_00705 42e8670a65abd324495518aaf04f72da 362 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 230 248 2.0E-121 T 14-10-2018 C3497_00705 42e8670a65abd324495518aaf04f72da 362 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 114 137 2.0E-121 T 14-10-2018 C3497_00705 42e8670a65abd324495518aaf04f72da 362 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 45 67 2.0E-121 T 14-10-2018 C3497_00705 42e8670a65abd324495518aaf04f72da 362 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 157 181 2.0E-121 T 14-10-2018 C3497_00705 42e8670a65abd324495518aaf04f72da 362 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 225 306 5.9E-33 T 14-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal C3497_00705 42e8670a65abd324495518aaf04f72da 362 SUPERFAMILY SSF56770 45 308 1.07E-91 T 14-10-2018 C3497_02250 9525e274dbb519f765c2426d1f2c9bad 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 271 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_02250 9525e274dbb519f765c2426d1f2c9bad 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 425 3.2E-187 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 C3497_02250 9525e274dbb519f765c2426d1f2c9bad 428 Gene3D G3DSA:3.90.1150.10 8 418 7.3E-178 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_02250 9525e274dbb519f765c2426d1f2c9bad 428 Gene3D G3DSA:3.40.640.10 70 318 7.3E-178 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_02250 9525e274dbb519f765c2426d1f2c9bad 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 4 426 105.747 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 C3497_02250 9525e274dbb519f765c2426d1f2c9bad 428 Pfam PF00202 Aminotransferase class-III 33 391 1.0E-73 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_02250 9525e274dbb519f765c2426d1f2c9bad 428 SUPERFAMILY SSF53383 4 426 1.18E-132 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_03595 deeb3623309dfcef3b4398c3653510df 83 ProSitePatterns PS00195 Glutaredoxin active site. 1 17 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 C3497_03595 deeb3623309dfcef3b4398c3653510df 83 Pfam PF00462 Glutaredoxin 2 59 8.2E-18 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 C3497_03595 deeb3623309dfcef3b4398c3653510df 83 PRINTS PR00160 Glutaredoxin signature 42 55 7.1E-10 T 14-10-2018 IPR014025 Glutaredoxin subgroup C3497_03595 deeb3623309dfcef3b4398c3653510df 83 PRINTS PR00160 Glutaredoxin signature 56 69 7.1E-10 T 14-10-2018 IPR014025 Glutaredoxin subgroup C3497_03595 deeb3623309dfcef3b4398c3653510df 83 Gene3D G3DSA:3.40.30.10 1 80 8.2E-24 T 14-10-2018 C3497_03595 deeb3623309dfcef3b4398c3653510df 83 SUPERFAMILY SSF52833 1 79 1.47E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_03595 deeb3623309dfcef3b4398c3653510df 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 1 78 1.7E-34 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 C3497_06750 bf5640c9957f442f81f9eb54663db894 295 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 121 282 3.8E-60 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 C3497_06750 bf5640c9957f442f81f9eb54663db894 295 Gene3D G3DSA:3.40.470.10 109 294 1.4E-73 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3497_06750 bf5640c9957f442f81f9eb54663db894 295 SUPERFAMILY SSF52141 110 288 4.25E-64 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3497_06750 bf5640c9957f442f81f9eb54663db894 295 SMART SM00986 135 282 2.7E-42 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3497_06750 bf5640c9957f442f81f9eb54663db894 295 SMART SM00987 135 282 2.7E-42 T 14-10-2018 C3497_06750 bf5640c9957f442f81f9eb54663db894 295 Pfam PF03167 Uracil DNA glycosylase superfamily 136 281 3.6E-47 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3497_08175 0f0c5f33c5ced872af690ac00f8aa555 390 SMART SM00267 214 383 6.3E-47 T 14-10-2018 IPR000160 GGDEF domain C3497_08175 0f0c5f33c5ced872af690ac00f8aa555 390 Pfam PF00990 Diguanylate cyclase, GGDEF domain 225 379 2.2E-35 T 14-10-2018 IPR000160 GGDEF domain C3497_08175 0f0c5f33c5ced872af690ac00f8aa555 390 SUPERFAMILY SSF55073 230 382 2.16E-40 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_08175 0f0c5f33c5ced872af690ac00f8aa555 390 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 223 381 3.0E-38 T 14-10-2018 IPR000160 GGDEF domain C3497_08175 0f0c5f33c5ced872af690ac00f8aa555 390 Gene3D G3DSA:3.30.70.270 215 382 1.2E-48 T 14-10-2018 C3497_13185 30ebbf7f1e7ecae47d95522a8893a0e9 617 SUPERFAMILY SSF52096 54 280 9.84E-16 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_13185 30ebbf7f1e7ecae47d95522a8893a0e9 617 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 17 609 6.9E-144 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 C3497_13185 30ebbf7f1e7ecae47d95522a8893a0e9 617 Pfam PF01343 Peptidase family S49 397 547 4.2E-47 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 C3497_13185 30ebbf7f1e7ecae47d95522a8893a0e9 617 Pfam PF01343 Peptidase family S49 133 286 1.8E-25 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 C3497_13185 30ebbf7f1e7ecae47d95522a8893a0e9 617 PIRSF PIRSF001217 9 617 1.2E-189 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 C3497_13185 30ebbf7f1e7ecae47d95522a8893a0e9 617 Gene3D G3DSA:3.90.226.10 320 545 2.6E-152 T 14-10-2018 C3497_13185 30ebbf7f1e7ecae47d95522a8893a0e9 617 Gene3D G3DSA:3.90.226.10 89 319 2.6E-152 T 14-10-2018 C3497_13185 30ebbf7f1e7ecae47d95522a8893a0e9 617 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 332 543 1.2E-51 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 C3497_13185 30ebbf7f1e7ecae47d95522a8893a0e9 617 Gene3D G3DSA:3.40.1750.10 181 503 2.6E-152 T 14-10-2018 C3497_13185 30ebbf7f1e7ecae47d95522a8893a0e9 617 SUPERFAMILY SSF52096 330 534 1.22E-38 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 465 1.1E-250 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 78 2.6E-18 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 SUPERFAMILY SSF50615 1 80 6.02E-24 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 SUPERFAMILY SSF47917 350 465 6.02E-55 T 14-10-2018 C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 SMART SM00382 147 332 0.0011 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 347 1.1E-62 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 SUPERFAMILY SSF52540 82 353 5.32E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 338 347 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 Gene3D G3DSA:3.40.50.300 81 349 6.1E-112 T 14-10-2018 C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 Gene3D G3DSA:1.10.1140.10 350 466 4.7E-61 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 Gene3D G3DSA:2.40.10.170 1 80 1.3E-27 T 14-10-2018 C3497_13270 5cc6f4dd492327f8449982854de00ab9 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 465 56.432 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 C3497_11430 a8ddc9c906253c82ad44123a5c246fca 416 Gene3D G3DSA:3.50.50.60 10 404 4.0E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_11430 a8ddc9c906253c82ad44123a5c246fca 416 SUPERFAMILY SSF51905 8 407 1.61E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_11430 a8ddc9c906253c82ad44123a5c246fca 416 SUPERFAMILY SSF160996 207 352 2.88E-11 T 14-10-2018 C3497_11430 a8ddc9c906253c82ad44123a5c246fca 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 1.2E-6 T 14-10-2018 C3497_11430 a8ddc9c906253c82ad44123a5c246fca 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.2E-6 T 14-10-2018 C3497_11430 a8ddc9c906253c82ad44123a5c246fca 416 Pfam PF03486 HI0933-like protein 9 405 4.4E-102 T 14-10-2018 C3497_11430 a8ddc9c906253c82ad44123a5c246fca 416 Gene3D G3DSA:2.40.30.10 195 353 4.0E-63 T 14-10-2018 C3497_11430 a8ddc9c906253c82ad44123a5c246fca 416 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 405 1.9E-84 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like C3497_11430 a8ddc9c906253c82ad44123a5c246fca 416 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 29 411 8.2E-155 T 14-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 C3497_11430 a8ddc9c906253c82ad44123a5c246fca 416 Gene3D G3DSA:1.10.8.260 280 336 4.0E-63 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily C3497_08345 7c4f947c3e0d69480d01e4323f925835 183 Pfam PF14697 4Fe-4S dicluster domain 106 160 6.4E-18 T 14-10-2018 C3497_08345 7c4f947c3e0d69480d01e4323f925835 183 Pfam PF04060 Putative Fe-S cluster 41 73 1.6E-16 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 C3497_08345 7c4f947c3e0d69480d01e4323f925835 183 PIRSF PIRSF005784 1 183 4.4E-87 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 C3497_08345 7c4f947c3e0d69480d01e4323f925835 183 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 180 1.2E-84 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 C3497_08345 7c4f947c3e0d69480d01e4323f925835 183 SUPERFAMILY SSF54862 35 172 4.65E-33 T 14-10-2018 C3497_08345 7c4f947c3e0d69480d01e4323f925835 183 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 113 124 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_08345 7c4f947c3e0d69480d01e4323f925835 183 Gene3D G3DSA:3.30.70.20 81 177 1.9E-21 T 14-10-2018 C3497_08345 7c4f947c3e0d69480d01e4323f925835 183 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_08345 7c4f947c3e0d69480d01e4323f925835 183 Gene3D G3DSA:1.10.15.40 36 80 1.6E-10 T 14-10-2018 C3497_08345 7c4f947c3e0d69480d01e4323f925835 183 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 1 165 25.58 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 Gene3D G3DSA:1.10.287.130 157 231 1.0E-12 T 14-10-2018 C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 SMART SM00387 276 382 1.5E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 SMART SM00388 168 234 5.5E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 SUPERFAMILY SSF55785 50 151 2.09E-7 T 14-10-2018 IPR035965 PAS domain superfamily C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 341 2.5E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 379 2.5E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 327 2.5E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 360 2.5E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 276 381 4.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 Pfam PF13188 PAS domain 61 105 1.4E-6 T 14-10-2018 IPR000014 PAS domain C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 Gene3D G3DSA:3.30.565.10 236 386 2.3E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 SUPERFAMILY SSF47384 156 232 8.44E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 Pfam PF00512 His Kinase A (phospho-acceptor) domain 169 233 4.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 Gene3D G3DSA:3.30.450.20 51 156 1.2E-6 T 14-10-2018 C3497_09235 21c1de6b28a409d03170d251b46a75ba 393 SUPERFAMILY SSF55874 224 380 9.69E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_07935 ad158b5acaf320297dba41d44dc44d2e 471 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 267 469 1.5E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_07935 ad158b5acaf320297dba41d44dc44d2e 471 SUPERFAMILY SSF161098 250 446 3.53E-17 T 14-10-2018 IPR035906 MetI-like superfamily C3497_07935 ad158b5acaf320297dba41d44dc44d2e 471 Gene3D G3DSA:1.10.3720.10 238 467 2.1E-20 T 14-10-2018 IPR035906 MetI-like superfamily C3497_00895 ab924563e0a3ced45b2ff373c1d721b7 201 SUPERFAMILY SSF63380 1 92 5.44E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3497_00895 ab924563e0a3ced45b2ff373c1d721b7 201 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 192 4.1E-58 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_00895 ab924563e0a3ced45b2ff373c1d721b7 201 Gene3D G3DSA:2.40.30.20 101 201 3.1E-34 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_00895 ab924563e0a3ced45b2ff373c1d721b7 201 PIRSF PIRSF000498 1 201 1.6E-69 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_00895 ab924563e0a3ced45b2ff373c1d721b7 201 Gene3D G3DSA:2.40.30.20 1 88 1.5E-22 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_00895 ab924563e0a3ced45b2ff373c1d721b7 201 SUPERFAMILY SSF63380 92 193 4.93E-33 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3497_00895 ab924563e0a3ced45b2ff373c1d721b7 201 Pfam PF00677 Lumazine binding domain 3 86 2.2E-16 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_00895 ab924563e0a3ced45b2ff373c1d721b7 201 Pfam PF00677 Lumazine binding domain 99 183 7.8E-25 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_12965 8f58fb00540353d968d8f59b1aee4f69 168 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 3 165 23.376 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB C3497_12965 8f58fb00540353d968d8f59b1aee4f69 168 SUPERFAMILY SSF158442 11 159 4.97E-43 T 14-10-2018 IPR023380 DsbB-like superfamily C3497_12965 8f58fb00540353d968d8f59b1aee4f69 168 Gene3D G3DSA:1.20.1550.10 1 166 2.1E-52 T 14-10-2018 IPR023380 DsbB-like superfamily C3497_12965 8f58fb00540353d968d8f59b1aee4f69 168 Pfam PF02600 Disulfide bond formation protein DsbB 8 157 3.3E-42 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 C3497_08755 ba4af64a3418e45e68d56fb920aa357c 144 SUPERFAMILY SSF52833 27 143 1.72E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_08755 ba4af64a3418e45e68d56fb920aa357c 144 Gene3D G3DSA:3.40.30.10 40 144 2.6E-29 T 14-10-2018 C3497_08755 ba4af64a3418e45e68d56fb920aa357c 144 Pfam PF00085 Thioredoxin 56 142 2.3E-26 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C3497_08755 ba4af64a3418e45e68d56fb920aa357c 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 52 142 8.1E-31 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3497_08755 ba4af64a3418e45e68d56fb920aa357c 144 PRINTS PR00421 Thioredoxin family signature 60 68 6.8E-9 T 14-10-2018 C3497_08755 ba4af64a3418e45e68d56fb920aa357c 144 PRINTS PR00421 Thioredoxin family signature 68 77 6.8E-9 T 14-10-2018 C3497_08755 ba4af64a3418e45e68d56fb920aa357c 144 PRINTS PR00421 Thioredoxin family signature 108 119 6.8E-9 T 14-10-2018 C3497_08755 ba4af64a3418e45e68d56fb920aa357c 144 ProSitePatterns PS00194 Thioredoxin family active site. 61 79 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3497_08755 ba4af64a3418e45e68d56fb920aa357c 144 PIRSF PIRSF000077 39 144 5.9E-30 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3497_08755 ba4af64a3418e45e68d56fb920aa357c 144 Gene3D G3DSA:2.20.28.140 2 38 3.7E-14 T 14-10-2018 C3497_13240 c8be129e4f5004cbc18e683187e9689b 245 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 244 2.7E-89 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 C3497_13240 c8be129e4f5004cbc18e683187e9689b 245 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 22 244 1.6E-75 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 C3497_13240 c8be129e4f5004cbc18e683187e9689b 245 Gene3D G3DSA:3.40.50.150 28 245 2.4E-67 T 14-10-2018 C3497_13240 c8be129e4f5004cbc18e683187e9689b 245 SUPERFAMILY SSF53335 8 244 2.34E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_13240 c8be129e4f5004cbc18e683187e9689b 245 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 33 48 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 C3497_13240 c8be129e4f5004cbc18e683187e9689b 245 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 13 244 36.21 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 C3497_13240 c8be129e4f5004cbc18e683187e9689b 245 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 153 167 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 C3497_08845 3354bbfec4430b3a9059d4d61d463100 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 263 274 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3497_08845 3354bbfec4430b3a9059d4d61d463100 656 Pfam PF13193 AMP-binding enzyme C-terminal domain 540 621 5.0E-27 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3497_08845 3354bbfec4430b3a9059d4d61d463100 656 SUPERFAMILY SSF56801 15 653 7.72E-179 T 14-10-2018 C3497_08845 3354bbfec4430b3a9059d4d61d463100 656 Pfam PF00501 AMP-binding enzyme 88 531 9.6E-97 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3497_08845 3354bbfec4430b3a9059d4d61d463100 656 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 23 654 4.2E-298 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 C3497_08845 3354bbfec4430b3a9059d4d61d463100 656 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 5 656 51.828 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 C3497_08845 3354bbfec4430b3a9059d4d61d463100 656 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 28 83 2.4E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 C3497_08845 3354bbfec4430b3a9059d4d61d463100 656 Gene3D G3DSA:3.30.300.30 527 656 1.9E-29 T 14-10-2018 C3497_08845 3354bbfec4430b3a9059d4d61d463100 656 Gene3D G3DSA:3.40.50.12780 56 524 4.9E-105 T 14-10-2018 C3497_03260 8a6dc39aa071f879d31b3e1a8cd7b75f 355 SUPERFAMILY SSF111369 47 269 8.89E-19 T 14-10-2018 C3497_03260 8a6dc39aa071f879d31b3e1a8cd7b75f 355 Pfam PF13437 HlyD family secretion protein 167 260 5.9E-6 T 14-10-2018 C3497_03260 8a6dc39aa071f879d31b3e1a8cd7b75f 355 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 352 1.2E-53 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_03260 8a6dc39aa071f879d31b3e1a8cd7b75f 355 Gene3D G3DSA:2.40.30.170 41 271 3.3E-50 T 14-10-2018 C3497_03260 8a6dc39aa071f879d31b3e1a8cd7b75f 355 Gene3D G3DSA:2.40.50.100 55 201 3.3E-50 T 14-10-2018 C3497_03260 8a6dc39aa071f879d31b3e1a8cd7b75f 355 Pfam PF13533 Biotin-lipoyl like 58 104 1.3E-9 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain C3497_03260 8a6dc39aa071f879d31b3e1a8cd7b75f 355 Gene3D G3DSA:1.10.287.470 89 161 3.3E-50 T 14-10-2018 C3497_03260 8a6dc39aa071f879d31b3e1a8cd7b75f 355 Gene3D G3DSA:2.40.420.20 34 350 3.3E-50 T 14-10-2018 C3497_06030 f17bb5d99558d34ee65095cb6bf502b6 161 SUPERFAMILY SSF89963 2 87 4.32E-28 T 14-10-2018 IPR036183 YajQ-like superfamily C3497_06030 f17bb5d99558d34ee65095cb6bf502b6 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 26.344 T 14-10-2018 IPR007551 Protein of unknown function DUF520 C3497_06030 f17bb5d99558d34ee65095cb6bf502b6 161 Gene3D G3DSA:3.30.70.860 95 161 7.0E-29 T 14-10-2018 IPR035571 UPF0234-like, C-terminal C3497_06030 f17bb5d99558d34ee65095cb6bf502b6 161 Gene3D G3DSA:3.30.70.990 9 94 2.7E-24 T 14-10-2018 IPR035570 UPF0234, N-terminal C3497_06030 f17bb5d99558d34ee65095cb6bf502b6 161 SUPERFAMILY SSF89963 88 161 3.27E-27 T 14-10-2018 IPR036183 YajQ-like superfamily C3497_06030 f17bb5d99558d34ee65095cb6bf502b6 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.3E-62 T 14-10-2018 IPR007551 Protein of unknown function DUF520 C3497_11630 ee3254c114647ab8060b300d92c1ad02 162 SMART SM01001 5 156 6.7E-105 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 C3497_11630 ee3254c114647ab8060b300d92c1ad02 162 Gene3D G3DSA:3.40.50.7700 1 162 1.5E-74 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 C3497_11630 ee3254c114647ab8060b300d92c1ad02 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 33.036 T 14-10-2018 IPR033747 Class I PurE C3497_11630 ee3254c114647ab8060b300d92c1ad02 162 SUPERFAMILY SSF52255 6 159 3.14E-67 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 C3497_11630 ee3254c114647ab8060b300d92c1ad02 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 158 3.7E-67 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 C3497_11630 ee3254c114647ab8060b300d92c1ad02 162 PIRSF PIRSF001338 2 161 2.1E-67 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 C3497_11630 ee3254c114647ab8060b300d92c1ad02 162 Pfam PF00731 AIR carboxylase 7 154 5.1E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 SMART SM00316 621 691 3.2E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Gene3D G3DSA:3.30.230.70 3 229 2.6E-82 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Pfam PF00575 S1 RNA binding domain 620 691 4.2E-17 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 2.2E-21 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 1.1E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 2.9E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Pfam PF00013 KH domain 557 614 1.8E-12 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 5.8E-12 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 SUPERFAMILY SSF54211 4 144 4.45E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 SUPERFAMILY SSF50249 621 696 4.62E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 SUPERFAMILY SSF55666 145 236 1.4E-30 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 SUPERFAMILY SSF54791 555 641 7.59E-24 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Gene3D G3DSA:3.30.230.70 234 550 1.1E-117 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Gene3D G3DSA:3.30.1370.10 551 622 1.1E-21 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 SMART SM00322 553 618 2.3E-13 T 14-10-2018 IPR004087 K Homology domain GO:0003676 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 SUPERFAMILY SSF55666 454 561 1.82E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 694 30.715 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 Gene3D G3DSA:2.40.50.140 623 694 8.5E-29 T 14-10-2018 C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 SUPERFAMILY SSF54211 291 489 6.58E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_05280 b2c2232d01105dd31caa56339b5cb985 700 PIRSF PIRSF005499 3 700 2.2E-301 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C3497_08330 f951af4fdd85f3cff863d1ce7f8df932 250 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 227 4.2E-40 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 C3497_08330 f951af4fdd85f3cff863d1ce7f8df932 250 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 18 88 4.4E-19 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 C3497_08330 f951af4fdd85f3cff863d1ce7f8df932 250 PIRSF PIRSF037208 1 244 4.8E-88 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 C3497_08330 f951af4fdd85f3cff863d1ce7f8df932 250 SUPERFAMILY SSF55729 82 236 2.05E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_08330 f951af4fdd85f3cff863d1ce7f8df932 250 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 8 235 39.012 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 Pfam PF08676 MutL C terminal dimerisation domain 412 558 6.5E-48 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 SUPERFAMILY SSF55874 4 198 1.7E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 Gene3D G3DSA:2.30.42.20 418 595 7.7E-58 T 14-10-2018 C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 Gene3D G3DSA:3.30.230.10 210 322 4.4E-37 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 127 2.8E-11 T 14-10-2018 C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 SMART SM00853 416 558 5.8E-54 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 SUPERFAMILY SSF118116 412 600 3.66E-59 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 206 322 3.3E-38 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 SMART SM01340 205 323 4.8E-58 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 598 27.832 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 Gene3D G3DSA:3.30.565.10 3 206 8.4E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 Gene3D G3DSA:3.30.1370.100 458 553 7.7E-58 T 14-10-2018 C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 4 303 2.2E-89 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 C3497_08710 c543c0d3dcbfdbf2f242e6101eeee571 602 SUPERFAMILY SSF54211 188 323 2.5E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 Gene3D G3DSA:3.50.80.20 95 187 9.0E-17 T 14-10-2018 C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 34 472 9.5E-92 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 62 455 1.0E-66 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 Gene3D G3DSA:3.40.710.10 38 94 1.6E-6 T 14-10-2018 C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 Gene3D G3DSA:3.40.710.10 284 474 1.5E-59 T 14-10-2018 C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 356 370 3.2E-24 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 298 320 3.2E-24 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 68 87 3.2E-24 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 371 385 3.2E-24 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 433 446 3.2E-24 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_00300 43509cc762a85c192e067f4ec4a7ad1d 477 SUPERFAMILY SSF56601 26 475 4.95E-95 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3497_06820 b7372ad02ab223b6935798550a013c3f 390 Pfam PF00437 Type II/IV secretion system protein 8 270 1.1E-39 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_06820 b7372ad02ab223b6935798550a013c3f 390 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.7E-128 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 C3497_06820 b7372ad02ab223b6935798550a013c3f 390 Gene3D G3DSA:3.40.50.300 101 357 1.9E-88 T 14-10-2018 C3497_06820 b7372ad02ab223b6935798550a013c3f 390 SUPERFAMILY SSF52540 3 335 5.07E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06820 b7372ad02ab223b6935798550a013c3f 390 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_06820 b7372ad02ab223b6935798550a013c3f 390 Gene3D G3DSA:3.30.450.90 1 100 2.2E-28 T 14-10-2018 C3497_09475 651417ac2a9676b1b9ec495d3e0ec1e7 103 SUPERFAMILY SSF47729 5 95 9.86E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3497_09475 651417ac2a9676b1b9ec495d3e0ec1e7 103 PRINTS PR01727 Prokaryotic integration host factor signature 62 75 2.1E-14 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_09475 651417ac2a9676b1b9ec495d3e0ec1e7 103 PRINTS PR01727 Prokaryotic integration host factor signature 78 92 2.1E-14 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_09475 651417ac2a9676b1b9ec495d3e0ec1e7 103 PRINTS PR01727 Prokaryotic integration host factor signature 44 59 2.1E-14 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_09475 651417ac2a9676b1b9ec495d3e0ec1e7 103 Gene3D G3DSA:4.10.520.10 3 100 4.8E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3497_09475 651417ac2a9676b1b9ec495d3e0ec1e7 103 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 3 99 30.105 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 C3497_09475 651417ac2a9676b1b9ec495d3e0ec1e7 103 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 50 69 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 C3497_09475 651417ac2a9676b1b9ec495d3e0ec1e7 103 SMART SM00411 5 94 6.7E-41 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_09475 651417ac2a9676b1b9ec495d3e0ec1e7 103 Pfam PF00216 Bacterial DNA-binding protein 5 93 1.2E-29 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_09475 651417ac2a9676b1b9ec495d3e0ec1e7 103 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 4 96 4.2E-44 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 Hamap MF_00006 Argininosuccinate lyase [argH]. 11 469 43.315 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 Gene3D G3DSA:1.10.275.10 34 238 3.8E-186 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal C3497_11995 50e95870bb6a3cf5302d65355770be59 472 Gene3D G3DSA:1.20.200.10 128 464 3.8E-186 T 14-10-2018 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 ProSitePatterns PS00163 Fumarate lyases signature. 284 293 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 Pfam PF00206 Lyase 15 309 7.7E-78 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal C3497_11995 50e95870bb6a3cf5302d65355770be59 472 SUPERFAMILY SSF48557 13 471 9.74E-149 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 PRINTS PR00149 Fumarate lyase superfamily signature 240 267 5.3E-31 T 14-10-2018 IPR000362 Fumarate lyase family C3497_11995 50e95870bb6a3cf5302d65355770be59 472 PRINTS PR00149 Fumarate lyase superfamily signature 111 129 5.3E-31 T 14-10-2018 IPR000362 Fumarate lyase family C3497_11995 50e95870bb6a3cf5302d65355770be59 472 PRINTS PR00149 Fumarate lyase superfamily signature 156 174 5.3E-31 T 14-10-2018 IPR000362 Fumarate lyase family C3497_11995 50e95870bb6a3cf5302d65355770be59 472 PRINTS PR00149 Fumarate lyase superfamily signature 284 300 5.3E-31 T 14-10-2018 IPR000362 Fumarate lyase family C3497_11995 50e95870bb6a3cf5302d65355770be59 472 Pfam PF14698 Argininosuccinate lyase C-terminal 372 446 4.9E-22 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 Gene3D G3DSA:1.10.40.30 369 448 3.8E-186 T 14-10-2018 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 TIGRFAM TIGR00838 argH: argininosuccinate lyase 12 471 9.3E-183 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 PRINTS PR00145 Argininosuccinate lyase family signature 151 171 1.9E-68 T 14-10-2018 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 PRINTS PR00145 Argininosuccinate lyase family signature 240 264 1.9E-68 T 14-10-2018 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 PRINTS PR00145 Argininosuccinate lyase family signature 319 338 1.9E-68 T 14-10-2018 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 PRINTS PR00145 Argininosuccinate lyase family signature 202 218 1.9E-68 T 14-10-2018 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 PRINTS PR00145 Argininosuccinate lyase family signature 284 300 1.9E-68 T 14-10-2018 C3497_11995 50e95870bb6a3cf5302d65355770be59 472 PRINTS PR00145 Argininosuccinate lyase family signature 110 132 1.9E-68 T 14-10-2018 C3497_09265 7c5da787214b08abe00ae7b2c68af8ea 392 Pfam PF02120 Flagellar hook-length control protein FliK 265 346 4.0E-22 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal C3497_09265 7c5da787214b08abe00ae7b2c68af8ea 392 Gene3D G3DSA:3.30.750.140 245 358 7.1E-32 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily C3497_09265 7c5da787214b08abe00ae7b2c68af8ea 392 PRINTS PR01007 Flagellar hook-length control protein signature 280 298 1.0E-9 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 C3497_09265 7c5da787214b08abe00ae7b2c68af8ea 392 PRINTS PR01007 Flagellar hook-length control protein signature 103 126 1.0E-9 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 C3497_09265 7c5da787214b08abe00ae7b2c68af8ea 392 PRINTS PR01007 Flagellar hook-length control protein signature 313 336 1.0E-9 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 Gene3D G3DSA:3.30.420.40 129 293 4.6E-125 T 14-10-2018 C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 Pfam PF00814 Glycoprotease family 24 307 4.4E-97 T 14-10-2018 IPR000905 Gcp-like domain C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 Gene3D G3DSA:3.30.420.40 3 315 4.6E-125 T 14-10-2018 C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 SUPERFAMILY SSF53067 3 121 2.3E-27 T 14-10-2018 C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 4.3E-131 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 333 62.767 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 6.6E-111 T 14-10-2018 IPR017861 Kae1/TsaD family C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 SUPERFAMILY SSF53067 101 309 4.21E-43 T 14-10-2018 C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.1E-47 T 14-10-2018 IPR017861 Kae1/TsaD family C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.1E-47 T 14-10-2018 IPR017861 Kae1/TsaD family C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.1E-47 T 14-10-2018 IPR017861 Kae1/TsaD family C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.1E-47 T 14-10-2018 IPR017861 Kae1/TsaD family C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.1E-47 T 14-10-2018 IPR017861 Kae1/TsaD family C3497_10235 139bf338f5c37ae2f0b382342c4ba36b 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.1E-47 T 14-10-2018 IPR017861 Kae1/TsaD family C3497_01235 5ad4bdebdfa28a42fab306bd6075fe9f 105 Gene3D G3DSA:3.30.750.24 6 96 2.4E-10 T 14-10-2018 IPR036513 STAS domain superfamily C3497_01235 5ad4bdebdfa28a42fab306bd6075fe9f 105 SUPERFAMILY SSF52091 6 93 1.73E-12 T 14-10-2018 IPR036513 STAS domain superfamily C3497_01235 5ad4bdebdfa28a42fab306bd6075fe9f 105 Pfam PF13466 STAS domain 11 89 3.9E-11 T 14-10-2018 IPR002645 STAS domain C3497_04490 e569f8ade04c7fd270628970a2713019 187 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 23 170 8.5E-30 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04490 e569f8ade04c7fd270628970a2713019 187 Gene3D G3DSA:3.40.50.700 11 185 1.3E-38 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily C3497_04490 e569f8ade04c7fd270628970a2713019 187 SUPERFAMILY SSF56770 12 182 6.62E-39 T 14-10-2018 C3497_00605 fb813b15225867e377da64fc4230eeba 331 SUPERFAMILY SSF56770 1 276 4.45E-79 T 14-10-2018 C3497_00605 fb813b15225867e377da64fc4230eeba 331 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 11 176 4.6E-31 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_00605 fb813b15225867e377da64fc4230eeba 331 PIRSF PIRSF000310 1 322 1.6E-87 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 C3497_00605 fb813b15225867e377da64fc4230eeba 331 Gene3D G3DSA:4.10.480.10 196 276 1.7E-19 T 14-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily C3497_00605 fb813b15225867e377da64fc4230eeba 331 Gene3D G3DSA:3.40.50.700 1 195 1.8E-50 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily C3497_00605 fb813b15225867e377da64fc4230eeba 331 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 198 273 3.2E-23 T 14-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal C3497_06885 6f3d4b460c00bdb51abf9269284ef228 160 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 8.5E-46 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C3497_06885 6f3d4b460c00bdb51abf9269284ef228 160 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 133 7.4E-64 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 C3497_06885 6f3d4b460c00bdb51abf9269284ef228 160 SUPERFAMILY SSF46785 2 132 9.96E-38 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_06885 6f3d4b460c00bdb51abf9269284ef228 160 Pfam PF02082 Transcriptional regulator 1 83 2.1E-28 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C3497_06885 6f3d4b460c00bdb51abf9269284ef228 160 Gene3D G3DSA:1.10.10.10 1 140 3.6E-51 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_07055 13c2fde705be9ab43ef77df3d89bb3bc 396 SUPERFAMILY SSF51230 1 92 1.15E-26 T 14-10-2018 IPR011053 Single hybrid motif C3497_07055 13c2fde705be9ab43ef77df3d89bb3bc 396 SUPERFAMILY SSF47005 108 147 4.19E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3497_07055 13c2fde705be9ab43ef77df3d89bb3bc 396 Gene3D G3DSA:2.40.50.100 2 97 3.4E-24 T 14-10-2018 C3497_07055 13c2fde705be9ab43ef77df3d89bb3bc 396 Gene3D G3DSA:3.30.559.10 164 396 4.0E-94 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 C3497_07055 13c2fde705be9ab43ef77df3d89bb3bc 396 Gene3D G3DSA:4.10.320.10 103 154 2.5E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3497_07055 13c2fde705be9ab43ef77df3d89bb3bc 396 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 396 6.4E-169 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 C3497_07055 13c2fde705be9ab43ef77df3d89bb3bc 396 Pfam PF02817 e3 binding domain 111 142 5.0E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 C3497_07055 13c2fde705be9ab43ef77df3d89bb3bc 396 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 165 393 4.1E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 C3497_07055 13c2fde705be9ab43ef77df3d89bb3bc 396 Pfam PF00364 Biotin-requiring enzyme 4 76 1.9E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3497_07055 13c2fde705be9ab43ef77df3d89bb3bc 396 SUPERFAMILY SSF52777 166 395 4.89E-87 T 14-10-2018 C3497_05800 4c686ee77e6c61f23a0311515fced54b 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 519 2.6E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_05800 4c686ee77e6c61f23a0311515fced54b 555 SMART SM00283 292 554 1.4E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_05800 4c686ee77e6c61f23a0311515fced54b 555 Gene3D G3DSA:1.10.287.950 225 547 2.1E-62 T 14-10-2018 C3497_05800 4c686ee77e6c61f23a0311515fced54b 555 SUPERFAMILY SSF58104 245 549 7.19E-61 T 14-10-2018 C3497_05800 4c686ee77e6c61f23a0311515fced54b 555 SMART SM00304 224 277 9.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05800 4c686ee77e6c61f23a0311515fced54b 555 SMART SM00304 319 379 69.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_10050 c8900ebb5df970770c0b3e00a7cdfff3 185 Gene3D G3DSA:3.30.1330.60 50 185 7.6E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_10050 c8900ebb5df970770c0b3e00a7cdfff3 185 Pfam PF00691 OmpA family 81 175 6.4E-16 T 14-10-2018 IPR006665 OmpA-like domain C3497_10050 c8900ebb5df970770c0b3e00a7cdfff3 185 SUPERFAMILY SSF103088 69 183 2.09E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_10050 c8900ebb5df970770c0b3e00a7cdfff3 185 PRINTS PR01021 OMPA domain signature 126 142 2.9E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_10050 c8900ebb5df970770c0b3e00a7cdfff3 185 PRINTS PR01021 OMPA domain signature 111 126 2.9E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_10050 c8900ebb5df970770c0b3e00a7cdfff3 185 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 126 143 7.7E-5 T 14-10-2018 C3497_10050 c8900ebb5df970770c0b3e00a7cdfff3 185 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 144 163 7.7E-5 T 14-10-2018 C3497_10050 c8900ebb5df970770c0b3e00a7cdfff3 185 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 164 184 7.7E-5 T 14-10-2018 C3497_11195 a70edd2879d4c81b20e787615cb58ee2 164 Pfam PF04002 RadC-like JAB domain 44 162 1.0E-41 T 14-10-2018 IPR025657 RadC-like JAB domain C3497_11195 a70edd2879d4c81b20e787615cb58ee2 164 TIGRFAM TIGR00608 radc: DNA repair protein RadC 28 164 6.5E-42 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 C3497_11195 a70edd2879d4c81b20e787615cb58ee2 164 Gene3D G3DSA:3.40.140.10 42 164 2.7E-41 T 14-10-2018 C3497_11195 a70edd2879d4c81b20e787615cb58ee2 164 SUPERFAMILY SSF102712 58 131 8.5E-5 T 14-10-2018 C3497_11955 5424e4f86e7f6f351a773eb64feabbd8 138 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 28 118 1.2E-25 T 14-10-2018 IPR031982 Type IV minor pilin ComP C3497_11955 5424e4f86e7f6f351a773eb64feabbd8 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_11955 5424e4f86e7f6f351a773eb64feabbd8 138 Gene3D G3DSA:3.30.700.10 7 137 1.1E-23 T 14-10-2018 C3497_11955 5424e4f86e7f6f351a773eb64feabbd8 138 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 1.3E-9 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3497_11955 5424e4f86e7f6f351a773eb64feabbd8 138 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 1.3E-9 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3497_11955 5424e4f86e7f6f351a773eb64feabbd8 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 5.8E-12 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_11955 5424e4f86e7f6f351a773eb64feabbd8 138 SUPERFAMILY SSF54523 7 123 2.04E-22 T 14-10-2018 C3497_11955 5424e4f86e7f6f351a773eb64feabbd8 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 7.0E-12 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_01745 b69a24f2aeef57542abdc27629355bca 208 SMART SM00448 2 116 3.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01745 b69a24f2aeef57542abdc27629355bca 208 SMART SM00421 144 201 3.3E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_01745 b69a24f2aeef57542abdc27629355bca 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 200 7.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_01745 b69a24f2aeef57542abdc27629355bca 208 Pfam PF00072 Response regulator receiver domain 4 116 5.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01745 b69a24f2aeef57542abdc27629355bca 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 9.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_01745 b69a24f2aeef57542abdc27629355bca 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 9.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_01745 b69a24f2aeef57542abdc27629355bca 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 9.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_01745 b69a24f2aeef57542abdc27629355bca 208 SUPERFAMILY SSF46894 136 205 8.5E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_01745 b69a24f2aeef57542abdc27629355bca 208 Gene3D G3DSA:3.40.50.12740 2 206 8.6E-53 T 14-10-2018 C3497_01745 b69a24f2aeef57542abdc27629355bca 208 SUPERFAMILY SSF52172 3 128 2.13E-29 T 14-10-2018 IPR011006 CheY-like superfamily C3497_01380 b6cc5cb4064aa5c14e6a134b215930b1 484 SMART SM00316 37 115 6.4E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_01380 b6cc5cb4064aa5c14e6a134b215930b1 484 SUPERFAMILY SSF50249 39 121 7.1E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_01380 b6cc5cb4064aa5c14e6a134b215930b1 484 Gene3D G3DSA:2.40.50.140 31 121 3.8E-29 T 14-10-2018 C3497_01380 b6cc5cb4064aa5c14e6a134b215930b1 484 Pfam PF10150 Ribonuclease E/G family 117 388 1.9E-101 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 C3497_01380 b6cc5cb4064aa5c14e6a134b215930b1 484 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 421 4.5E-152 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 C3497_01380 b6cc5cb4064aa5c14e6a134b215930b1 484 Gene3D G3DSA:3.40.1260.20 397 484 3.8E-6 T 14-10-2018 C3497_04470 6a8c97ee3b59ce5759ccc5a7dd9f59c2 146 PRINTS PR00332 Histidine triad family signature 14 30 1.4E-12 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3497_04470 6a8c97ee3b59ce5759ccc5a7dd9f59c2 146 PRINTS PR00332 Histidine triad family signature 102 112 1.4E-12 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3497_04470 6a8c97ee3b59ce5759ccc5a7dd9f59c2 146 PRINTS PR00332 Histidine triad family signature 35 53 1.4E-12 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3497_04470 6a8c97ee3b59ce5759ccc5a7dd9f59c2 146 Gene3D G3DSA:3.30.428.10 5 146 2.0E-43 T 14-10-2018 IPR036265 HIT-like superfamily C3497_04470 6a8c97ee3b59ce5759ccc5a7dd9f59c2 146 SUPERFAMILY SSF54197 12 145 5.26E-40 T 14-10-2018 IPR036265 HIT-like superfamily C3497_04470 6a8c97ee3b59ce5759ccc5a7dd9f59c2 146 Pfam PF01230 HIT domain 21 115 1.2E-21 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3497_04470 6a8c97ee3b59ce5759ccc5a7dd9f59c2 146 ProSitePatterns PS00892 HIT domain signature. 95 113 - T 14-10-2018 IPR019808 Histidine triad, conserved site C3497_04235 148924a779938a20c38111833f653e7f 1075 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 422 542 2.8E-40 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 668 873 5.8E-36 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_04235 148924a779938a20c38111833f653e7f 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.1E-73 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_04235 148924a779938a20c38111833f653e7f 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 704 718 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_04235 148924a779938a20c38111833f653e7f 1075 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.411 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 SUPERFAMILY SSF56059 128 401 9.55E-111 T 14-10-2018 C3497_04235 148924a779938a20c38111833f653e7f 1075 Gene3D G3DSA:3.40.50.20 549 657 6.0E-49 T 14-10-2018 C3497_04235 148924a779938a20c38111833f653e7f 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 837 844 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_04235 148924a779938a20c38111833f653e7f 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_04235 148924a779938a20c38111833f653e7f 1075 SUPERFAMILY SSF52440 1 127 6.04E-51 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3497_04235 148924a779938a20c38111833f653e7f 1075 SMART SM01096 419 542 1.9E-74 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 Gene3D G3DSA:3.30.470.20 119 403 1.8E-131 T 14-10-2018 C3497_04235 148924a779938a20c38111833f653e7f 1075 Gene3D G3DSA:3.40.50.1380 935 1072 4.3E-36 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C3497_04235 148924a779938a20c38111833f653e7f 1075 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.241 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 Gene3D G3DSA:1.10.1030.10 404 548 3.8E-48 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 SUPERFAMILY SSF56059 668 932 5.48E-104 T 14-10-2018 C3497_04235 148924a779938a20c38111833f653e7f 1075 SUPERFAMILY SSF52440 551 670 1.01E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3497_04235 148924a779938a20c38111833f653e7f 1075 SMART SM00851 954 1041 3.8E-34 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C3497_04235 148924a779938a20c38111833f653e7f 1075 Gene3D G3DSA:3.40.50.20 1 116 5.4E-51 T 14-10-2018 C3497_04235 148924a779938a20c38111833f653e7f 1075 SUPERFAMILY SSF48108 396 549 2.48E-52 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.4E-66 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 4.4E-66 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.4E-66 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.4E-66 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.4E-66 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.4E-66 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 4.4E-66 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_04235 148924a779938a20c38111833f653e7f 1075 Pfam PF02142 MGS-like domain 955 1041 1.2E-22 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C3497_04235 148924a779938a20c38111833f653e7f 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_04235 148924a779938a20c38111833f653e7f 1075 SUPERFAMILY SSF52335 936 1070 2.62E-37 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C3497_04235 148924a779938a20c38111833f653e7f 1075 Gene3D G3DSA:3.30.470.20 660 934 7.9E-120 T 14-10-2018 C3497_13900 f6bbc123ed040ed4b2f147ac798fe7a4 214 Gene3D G3DSA:3.40.30.10 3 80 1.9E-29 T 14-10-2018 C3497_13900 f6bbc123ed040ed4b2f147ac798fe7a4 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 213 5.4E-93 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 C3497_13900 f6bbc123ed040ed4b2f147ac798fe7a4 214 Gene3D G3DSA:1.20.1050.10 85 214 2.1E-56 T 14-10-2018 C3497_13900 f6bbc123ed040ed4b2f147ac798fe7a4 214 Pfam PF13410 Glutathione S-transferase, C-terminal domain 137 177 1.4E-6 T 14-10-2018 C3497_13900 f6bbc123ed040ed4b2f147ac798fe7a4 214 SUPERFAMILY SSF52833 1 85 3.78E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_13900 f6bbc123ed040ed4b2f147ac798fe7a4 214 SUPERFAMILY SSF47616 83 213 1.24E-32 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C3497_13900 f6bbc123ed040ed4b2f147ac798fe7a4 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 81 4.9E-20 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3497_04670 f232c456e1a0ecfcc965e69f1258771c 191 SUPERFAMILY SSF140478 26 174 5.23E-45 T 14-10-2018 IPR023353 LemA-like domain superfamily C3497_04670 f232c456e1a0ecfcc965e69f1258771c 191 Gene3D G3DSA:1.20.1440.20 17 186 4.4E-48 T 14-10-2018 IPR023353 LemA-like domain superfamily C3497_04670 f232c456e1a0ecfcc965e69f1258771c 191 Pfam PF04011 LemA family 12 186 4.0E-55 T 14-10-2018 IPR007156 LemA C3497_10805 ed6da8027cf336f066b6dc421dd2c733 276 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_10805 ed6da8027cf336f066b6dc421dd2c733 276 Gene3D G3DSA:3.40.50.300 35 276 4.0E-64 T 14-10-2018 C3497_10805 ed6da8027cf336f066b6dc421dd2c733 276 PIRSF PIRSF037116 27 276 2.6E-85 T 14-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK C3497_10805 ed6da8027cf336f066b6dc421dd2c733 276 Pfam PF00005 ABC transporter 45 199 3.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_10805 ed6da8027cf336f066b6dc421dd2c733 276 SUPERFAMILY SSF52540 38 271 6.88E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10805 ed6da8027cf336f066b6dc421dd2c733 276 SMART SM00382 52 249 4.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 Gene3D G3DSA:3.30.499.20 5 288 6.4E-98 T 14-10-2018 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 Pfam PF00330 Aconitase family (aconitate hydratase) 8 460 7.1E-157 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 PRINTS PR00415 Aconitase family signature 121 134 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 PRINTS PR00415 Aconitase family signature 345 356 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 PRINTS PR00415 Aconitase family signature 211 224 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 PRINTS PR00415 Aconitase family signature 197 210 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 PRINTS PR00415 Aconitase family signature 288 302 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 PRINTS PR00415 Aconitase family signature 402 415 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 PRINTS PR00415 Aconitase family signature 135 150 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 PRINTS PR00415 Aconitase family signature 110 118 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 467 6.6E-239 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 468 59.292 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 Gene3D G3DSA:3.30.499.10 329 468 1.5E-49 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C3497_04050 f905c97baedfae7a01a435db4ea4fb92 468 SUPERFAMILY SSF53732 2 467 1.96E-164 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SMART SM00086 886 927 4.8 T 14-10-2018 IPR001610 PAC motif C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SMART SM00086 1007 1049 8.3E-6 T 14-10-2018 IPR001610 PAC motif C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SMART SM00086 763 803 51.0 T 14-10-2018 IPR001610 PAC motif C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Gene3D G3DSA:3.20.20.450 1233 1486 1.9E-95 T 14-10-2018 IPR035919 EAL domain superfamily C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Pfam PF03705 CheR methyltransferase, all-alpha domain 206 256 7.5E-9 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Gene3D G3DSA:3.30.450.20 937 1058 2.1E-33 T 14-10-2018 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Pfam PF00563 EAL domain 1238 1472 7.4E-73 T 14-10-2018 IPR001633 EAL domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Pfam PF08448 PAS fold 828 928 2.9E-10 T 14-10-2018 IPR013656 PAS fold-4 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Pfam PF08448 PAS fold 702 802 2.6E-5 T 14-10-2018 IPR013656 PAS fold-4 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SMART SM00091 695 763 3.8 T 14-10-2018 IPR000014 PAS domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SMART SM00091 815 880 12.0 T 14-10-2018 IPR000014 PAS domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SMART SM00091 935 1001 3.8E-6 T 14-10-2018 IPR000014 PAS domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SMART SM00091 494 559 230.0 T 14-10-2018 IPR000014 PAS domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Gene3D G3DSA:3.40.50.150 268 465 2.7E-62 T 14-10-2018 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SUPERFAMILY SSF55785 943 1046 2.44E-28 T 14-10-2018 IPR035965 PAS domain superfamily C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Gene3D G3DSA:3.30.450.20 803 936 1.3E-23 T 14-10-2018 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Gene3D G3DSA:3.40.50.180 3 195 6.9E-66 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SMART SM00138 203 463 8.6E-86 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Gene3D G3DSA:3.30.450.20 681 801 6.0E-8 T 14-10-2018 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SMART SM00052 1230 1477 1.4E-107 T 14-10-2018 IPR001633 EAL domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SUPERFAMILY SSF47757 204 271 1.83E-8 T 14-10-2018 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Pfam PF01739 CheR methyltransferase, SAM binding domain 270 454 1.1E-54 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 PRINTS PR00996 Glutamate methyltransferase family signature 337 353 4.1E-25 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 PRINTS PR00996 Glutamate methyltransferase family signature 422 445 4.1E-25 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 PRINTS PR00996 Glutamate methyltransferase family signature 403 417 4.1E-25 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 PRINTS PR00996 Glutamate methyltransferase family signature 262 274 4.1E-25 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 PRINTS PR00996 Glutamate methyltransferase family signature 301 321 4.1E-25 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1060 1216 6.8E-55 T 14-10-2018 IPR000160 GGDEF domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 811 934 9.4E-14 T 14-10-2018 IPR000014 PAS domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 940 1055 6.3E-19 T 14-10-2018 IPR000014 PAS domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SUPERFAMILY SSF55785 799 918 1.74E-15 T 14-10-2018 IPR035965 PAS domain superfamily C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SUPERFAMILY SSF53335 270 462 3.1E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SUPERFAMILY SSF52738 8 191 6.67E-57 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Gene3D G3DSA:3.30.70.270 1059 1232 7.8E-66 T 14-10-2018 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1057 1219 9.2E-50 T 14-10-2018 IPR000160 GGDEF domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SUPERFAMILY SSF55785 688 796 4.01E-6 T 14-10-2018 IPR035965 PAS domain superfamily C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SUPERFAMILY SSF141868 1235 1484 2.22E-83 T 14-10-2018 IPR035919 EAL domain superfamily C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Pfam PF01339 CheB methylesterase 12 187 7.9E-57 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SMART SM00267 1049 1220 4.3E-71 T 14-10-2018 IPR000160 GGDEF domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 Pfam PF13426 PAS domain 946 1048 3.5E-14 T 14-10-2018 IPR000014 PAS domain C3497_13595 6e582ea8523417d23c20c5cae8433ae0 1488 SUPERFAMILY SSF55073 1065 1221 3.92E-55 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_06010 099d83ef286cda8b12e1793e800c5948 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 302 76.594 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 SUPERFAMILY SSF53671 3 301 2.36E-102 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 Gene3D G3DSA:3.40.50.1370 6 298 4.2E-112 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 145 1.3E-47 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 299 8.0E-49 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 Gene3D G3DSA:3.40.50.1370 135 288 4.2E-112 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 2.4E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 2.4E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 2.4E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 2.4E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 5 301 1.1E-106 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 1.3E-28 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 218 228 1.3E-28 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 1.3E-28 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 1.3E-28 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3497_06010 099d83ef286cda8b12e1793e800c5948 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 1.3E-28 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3497_14205 263c9d69123fae8246b38f2b5c6be594 213 Pfam PF01323 DSBA-like thioredoxin domain 13 198 2.3E-33 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 C3497_14205 263c9d69123fae8246b38f2b5c6be594 213 Gene3D G3DSA:3.40.30.10 12 209 1.1E-57 T 14-10-2018 C3497_14205 263c9d69123fae8246b38f2b5c6be594 213 SUPERFAMILY SSF52833 12 202 1.12E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_14205 263c9d69123fae8246b38f2b5c6be594 213 PIRSF PIRSF006386 7 213 2.7E-52 T 14-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 7 917 19.605 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 570 582 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 SUPERFAMILY SSF51621 15 917 0.0 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 147 158 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 610 639 2.4E-55 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 405 425 2.4E-55 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 744 770 2.4E-55 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 199 215 2.4E-55 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 568 588 2.4E-55 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 146 159 2.4E-55 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 254 269 2.4E-55 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 Gene3D G3DSA:1.20.1440.90 282 408 5.8E-8 T 14-10-2018 C3497_11950 3ea77ef623cafd4e9ea6d5766842b1e6 917 Pfam PF00311 Phosphoenolpyruvate carboxylase 143 917 2.6E-289 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3497_01015 fd359a525651c990e9434d8f18a70ff6 615 SUPERFAMILY SSF56228 2 207 1.57E-74 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily C3497_01015 fd359a525651c990e9434d8f18a70ff6 615 Gene3D G3DSA:3.60.9.10 1 209 5.7E-86 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily C3497_01015 fd359a525651c990e9434d8f18a70ff6 615 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 221 615 1.2E-130 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 C3497_01015 fd359a525651c990e9434d8f18a70ff6 615 Gene3D G3DSA:1.10.569.10 242 443 3.4E-129 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 C3497_01015 fd359a525651c990e9434d8f18a70ff6 615 SMART SM00790 3 206 3.6E-121 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 C3497_01015 fd359a525651c990e9434d8f18a70ff6 615 Gene3D G3DSA:1.10.599.10 240 615 3.4E-129 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 C3497_01015 fd359a525651c990e9434d8f18a70ff6 615 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 205 2.5E-79 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 C3497_01015 fd359a525651c990e9434d8f18a70ff6 615 SUPERFAMILY SSF48310 212 615 2.88E-130 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 C3497_09550 385d61030109b315e518044b99d501bc 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.509 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 C3497_09550 385d61030109b315e518044b99d501bc 94 Gene3D G3DSA:4.10.520.10 1 94 1.5E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3497_09550 385d61030109b315e518044b99d501bc 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.0E-30 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_09550 385d61030109b315e518044b99d501bc 94 SUPERFAMILY SSF47729 1 91 9.27E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3497_09550 385d61030109b315e518044b99d501bc 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 3.7E-42 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 C3497_09550 385d61030109b315e518044b99d501bc 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_09550 385d61030109b315e518044b99d501bc 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_09550 385d61030109b315e518044b99d501bc 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_09550 385d61030109b315e518044b99d501bc 94 SMART SM00411 1 91 6.8E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_04170 5370d5b8daa5173a380423208f11124c 645 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 641 37.582 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 C3497_04170 5370d5b8daa5173a380423208f11124c 645 Gene3D G3DSA:3.30.420.40 180 366 1.7E-167 T 14-10-2018 C3497_04170 5370d5b8daa5173a380423208f11124c 645 Gene3D G3DSA:3.30.420.40 5 379 1.7E-167 T 14-10-2018 C3497_04170 5370d5b8daa5173a380423208f11124c 645 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 Pfam PF00012 Hsp70 protein 4 603 1.6E-268 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 SUPERFAMILY SSF53067 187 382 6.79E-69 T 14-10-2018 C3497_04170 5370d5b8daa5173a380423208f11124c 645 SUPERFAMILY SSF100934 507 607 1.57E-21 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 PRINTS PR00301 70kDa heat shock protein signature 198 208 1.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 Gene3D G3DSA:1.20.1270.10 524 607 9.8E-25 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.3E-297 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 C3497_04170 5370d5b8daa5173a380423208f11124c 645 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 Gene3D G3DSA:3.90.640.10 229 316 1.7E-167 T 14-10-2018 C3497_04170 5370d5b8daa5173a380423208f11124c 645 Gene3D G3DSA:2.60.34.10 383 523 2.3E-67 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C3497_04170 5370d5b8daa5173a380423208f11124c 645 SUPERFAMILY SSF53067 4 184 1.94E-64 T 14-10-2018 C3497_04170 5370d5b8daa5173a380423208f11124c 645 SUPERFAMILY SSF100920 384 540 9.29E-64 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C3497_05410 28f7ec09477ffcbe382eda15513f2a15 156 SUPERFAMILY SSF52788 1 152 3.79E-51 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily C3497_05410 28f7ec09477ffcbe382eda15513f2a15 156 Gene3D G3DSA:3.40.50.2300 1 155 4.3E-57 T 14-10-2018 C3497_05410 28f7ec09477ffcbe382eda15513f2a15 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 149 1.6E-43 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C3497_05410 28f7ec09477ffcbe382eda15513f2a15 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 7.8E-26 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3497_05410 28f7ec09477ffcbe382eda15513f2a15 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 7.8E-26 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3497_05410 28f7ec09477ffcbe382eda15513f2a15 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 7.8E-26 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3497_05410 28f7ec09477ffcbe382eda15513f2a15 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 7.8E-26 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3497_05410 28f7ec09477ffcbe382eda15513f2a15 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 104 117 7.8E-26 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3497_05410 28f7ec09477ffcbe382eda15513f2a15 156 SMART SM00226 2 151 4.6E-55 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C3497_05680 d562f8947ccc4c9b88d022ea8ab0e605 260 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C3497_05680 d562f8947ccc4c9b88d022ea8ab0e605 260 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 183 6.7E-34 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 C3497_05680 d562f8947ccc4c9b88d022ea8ab0e605 260 Gene3D G3DSA:1.20.120.1760 4 141 2.0E-15 T 14-10-2018 C3497_05680 d562f8947ccc4c9b88d022ea8ab0e605 260 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 4.9E-13 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C3497_14215 895803e1aec802b028564ae29e341d58 299 Gene3D G3DSA:3.40.190.10 165 265 3.5E-44 T 14-10-2018 C3497_14215 895803e1aec802b028564ae29e341d58 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 4.5E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14215 895803e1aec802b028564ae29e341d58 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 4.5E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14215 895803e1aec802b028564ae29e341d58 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 4.5E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14215 895803e1aec802b028564ae29e341d58 299 Gene3D G3DSA:1.10.10.10 10 98 2.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_14215 895803e1aec802b028564ae29e341d58 299 Gene3D G3DSA:3.40.190.10 108 292 3.5E-44 T 14-10-2018 C3497_14215 895803e1aec802b028564ae29e341d58 299 Pfam PF03466 LysR substrate binding domain 94 294 1.7E-30 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_14215 895803e1aec802b028564ae29e341d58 299 SUPERFAMILY SSF46785 8 90 1.85E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_14215 895803e1aec802b028564ae29e341d58 299 SUPERFAMILY SSF53850 95 297 5.58E-32 T 14-10-2018 C3497_14215 895803e1aec802b028564ae29e341d58 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 69 1.2E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_01550 696786e7869c3459a5b34285ef2da14a 98 Gene3D G3DSA:1.10.20.30 1 44 2.3E-13 T 14-10-2018 C3497_01550 696786e7869c3459a5b34285ef2da14a 98 Gene3D G3DSA:1.20.5.50 46 96 3.2E-5 T 14-10-2018 C3497_01550 696786e7869c3459a5b34285ef2da14a 98 Pfam PF05164 Cell division protein ZapA 5 86 4.2E-17 T 14-10-2018 IPR007838 Cell division protein ZapA-like C3497_01550 696786e7869c3459a5b34285ef2da14a 98 SUPERFAMILY SSF102829 4 91 5.75E-18 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily C3497_12940 47ac56940afd3ffb48028d09fe05e9ab 358 Gene3D G3DSA:1.20.120.1840 8 186 1.3E-46 T 14-10-2018 C3497_12940 47ac56940afd3ffb48028d09fe05e9ab 358 Gene3D G3DSA:3.40.50.10470 187 350 1.4E-49 T 14-10-2018 C3497_12940 47ac56940afd3ffb48028d09fe05e9ab 358 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 6 354 35.45 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 C3497_12940 47ac56940afd3ffb48028d09fe05e9ab 358 Pfam PF01008 Initiation factor 2 subunit family 48 344 1.1E-59 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 C3497_12940 47ac56940afd3ffb48028d09fe05e9ab 358 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 37 343 6.3E-88 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 C3497_12940 47ac56940afd3ffb48028d09fe05e9ab 358 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 14 343 3.5E-116 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 C3497_12940 47ac56940afd3ffb48028d09fe05e9ab 358 SUPERFAMILY SSF100950 5 350 2.23E-105 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3497_05735 7e6bc8d45b9fcc82d460b48da289691f 127 PIRSF PIRSF021239 15 127 2.5E-52 T 14-10-2018 IPR007437 Protein of unknown function DUF486 C3497_05735 7e6bc8d45b9fcc82d460b48da289691f 127 Pfam PF04342 Putative member of DMT superfamily (DUF486) 21 125 1.5E-45 T 14-10-2018 IPR007437 Protein of unknown function DUF486 C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 Pfam PF11638 DnaA N-terminal domain 13 77 4.4E-17 T 14-10-2018 IPR024633 DnaA N-terminal domain C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 12 485 32.9 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 Gene3D G3DSA:1.10.8.60 317 386 4.6E-24 T 14-10-2018 C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 SUPERFAMILY SSF52540 150 363 2.39E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 Gene3D G3DSA:3.40.50.300 140 315 1.0E-48 T 14-10-2018 C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 15 483 4.9E-176 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 ProSitePatterns PS01008 DnaA protein signature. 444 463 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 Pfam PF00308 Bacterial dnaA protein 151 368 1.6E-90 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 SMART SM00382 183 314 7.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 SMART SM00760 394 463 4.3E-43 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 444 463 2.7E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 184 204 2.7E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 248 262 2.7E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 216 230 2.7E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 282 309 2.7E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 SUPERFAMILY SSF48295 382 485 6.28E-37 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 395 463 4.8E-31 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 Gene3D G3DSA:3.30.300.180 11 118 1.1E-22 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily C3497_14415 6358ace1920a6bc49b4d7bb01d9d466d 486 Gene3D G3DSA:1.10.1750.10 387 485 2.4E-34 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C3497_13935 9aa82a80585ae7cfde8918abb5b6ba08 215 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 215 32.574 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_13935 9aa82a80585ae7cfde8918abb5b6ba08 215 Gene3D G3DSA:3.40.50.2020 2 211 3.0E-67 T 14-10-2018 C3497_13935 9aa82a80585ae7cfde8918abb5b6ba08 215 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 12 185 1.1E-52 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_13935 9aa82a80585ae7cfde8918abb5b6ba08 215 Pfam PF00156 Phosphoribosyl transferase domain 39 159 3.2E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3497_13935 9aa82a80585ae7cfde8918abb5b6ba08 215 SUPERFAMILY SSF53271 4 209 3.51E-44 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3497_10435 ee69f14622528201e00b77694a438a28 401 Pfam PF00534 Glycosyl transferases group 1 211 363 2.4E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3497_10435 ee69f14622528201e00b77694a438a28 401 TIGRFAM TIGR04063 stp3: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family 2 396 7.6E-196 T 14-10-2018 IPR024004 Glycosyltransferase family 1, Daro2409 family C3497_10435 ee69f14622528201e00b77694a438a28 401 SUPERFAMILY SSF53756 2 393 1.73E-76 T 14-10-2018 C3497_10435 ee69f14622528201e00b77694a438a28 401 Gene3D G3DSA:3.40.50.2000 198 377 5.0E-41 T 14-10-2018 C3497_10435 ee69f14622528201e00b77694a438a28 401 Pfam PF13579 Glycosyl transferase 4-like domain 15 187 4.1E-26 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_10435 ee69f14622528201e00b77694a438a28 401 Gene3D G3DSA:3.40.50.2000 1 197 6.0E-27 T 14-10-2018 C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 Pfam PF01225 Mur ligase family, catalytic domain 21 97 4.6E-14 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 Gene3D G3DSA:3.90.190.20 321 458 1.8E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 SUPERFAMILY SSF63418 1 99 9.55E-24 T 14-10-2018 IPR035911 MurE/MurF, N-terminal C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 SUPERFAMILY SSF53623 101 320 1.44E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 2 454 34.094 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 399 1.3E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 Gene3D G3DSA:3.40.1190.10 83 318 6.1E-76 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 Gene3D G3DSA:3.40.1390.10 1 82 1.3E-24 T 14-10-2018 C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 SUPERFAMILY SSF53244 322 453 1.21E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 Pfam PF08245 Mur ligase middle domain 107 301 7.8E-44 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3497_12150 fc909a823e8b8d253262832172e5ec7d 469 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 26 453 1.2E-137 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_08980 1f778a5d03c407a40f56453247aca141 122 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 41 120 6.6E-12 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 C3497_08980 1f778a5d03c407a40f56453247aca141 122 PRINTS PR00155 Amicyanin family signature 105 120 2.3E-10 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 C3497_08980 1f778a5d03c407a40f56453247aca141 122 PRINTS PR00155 Amicyanin family signature 50 69 2.3E-10 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 C3497_08980 1f778a5d03c407a40f56453247aca141 122 PRINTS PR00155 Amicyanin family signature 89 104 2.3E-10 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 C3497_08980 1f778a5d03c407a40f56453247aca141 122 Gene3D G3DSA:2.60.40.420 32 120 3.1E-26 T 14-10-2018 IPR008972 Cupredoxin C3497_08980 1f778a5d03c407a40f56453247aca141 122 SUPERFAMILY SSF49503 23 120 2.54E-27 T 14-10-2018 IPR008972 Cupredoxin C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 45 97 6.0E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 Gene3D G3DSA:3.40.228.10 180 725 0.0 T 14-10-2018 C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 Gene3D G3DSA:3.30.200.210 44 689 0.0 T 14-10-2018 C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 SUPERFAMILY SSF53706 42 728 3.66E-204 T 14-10-2018 C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 SMART SM00926 44 98 3.8E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 2 851 32.546 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 4 851 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 Gene3D G3DSA:3.40.50.740 101 646 0.0 T 14-10-2018 C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 Pfam PF01568 Molydopterin dinucleotide binding domain 737 845 2.7E-25 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 Gene3D G3DSA:2.40.40.20 728 851 4.0E-48 T 14-10-2018 C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 SUPERFAMILY SSF50692 710 851 1.22E-41 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily C3497_13100 c4ced045b0323cf17fef1e99d946d571 851 Pfam PF00384 Molybdopterin oxidoreductase 101 584 1.7E-94 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 Gene3D G3DSA:1.20.120.960 44 171 1.8E-9 T 14-10-2018 C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 PIRSF PIRSF003167 1 630 4.4E-180 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 Pfam PF00672 HAMP domain 199 247 2.2E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 528 620 2.7E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 Pfam PF13492 GAF domain 289 405 2.3E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 SMART SM00387 527 622 4.0E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 Pfam PF07730 Histidine kinase 422 487 1.8E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 Gene3D G3DSA:3.30.565.10 490 621 9.1E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 SUPERFAMILY SSF55781 265 413 2.07E-8 T 14-10-2018 C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 Gene3D G3DSA:1.10.8.500 199 249 3.1E-6 T 14-10-2018 C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 SMART SM00304 199 251 6.6E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 Gene3D G3DSA:3.30.450.40 272 417 6.4E-11 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 SUPERFAMILY SSF55874 524 620 5.16E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 SUPERFAMILY SSF158472 199 249 2.09E-9 T 14-10-2018 C3497_13120 871ead6ab453058c1c50f3844263f0ee 640 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 41 126 7.1E-10 T 14-10-2018 IPR029095 NarX-like, N-terminal C3497_09050 3f4f7c05d1a1c5f25a2b738fc6854fd4 343 SUPERFAMILY SSF53850 25 333 3.06E-72 T 14-10-2018 C3497_09050 3f4f7c05d1a1c5f25a2b738fc6854fd4 343 Gene3D G3DSA:3.40.190.10 133 250 9.2E-87 T 14-10-2018 C3497_09050 3f4f7c05d1a1c5f25a2b738fc6854fd4 343 Gene3D G3DSA:3.40.190.10 32 297 9.2E-87 T 14-10-2018 C3497_09050 3f4f7c05d1a1c5f25a2b738fc6854fd4 343 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 16 340 1.9E-149 T 14-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative C3497_09050 3f4f7c05d1a1c5f25a2b738fc6854fd4 343 PIRSF PIRSF002825 3 336 3.4E-90 T 14-10-2018 IPR026045 Ferric binding protein C3497_09050 3f4f7c05d1a1c5f25a2b738fc6854fd4 343 Pfam PF13343 Bacterial extracellular solute-binding protein 78 317 3.4E-32 T 14-10-2018 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 Gene3D G3DSA:3.40.50.2300 560 682 1.3E-24 T 14-10-2018 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 SUPERFAMILY SSF55785 35 147 3.66E-6 T 14-10-2018 IPR035965 PAS domain superfamily C3497_01670 cea15dd276cf2159b114e748e03fc983 686 Gene3D G3DSA:1.10.287.130 307 375 1.7E-21 T 14-10-2018 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 SUPERFAMILY SSF47384 304 373 2.16E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 180 302 5.8E-15 T 14-10-2018 IPR000014 PAS domain C3497_01670 cea15dd276cf2159b114e748e03fc983 686 Pfam PF00072 Response regulator receiver domain 562 672 2.2E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 482 2.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 517 2.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 496 2.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 536 2.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 SUPERFAMILY SSF55874 367 538 8.38E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_01670 cea15dd276cf2159b114e748e03fc983 686 Gene3D G3DSA:3.30.450.20 169 306 2.2E-26 T 14-10-2018 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 SMART SM00388 310 376 2.0E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 SMART SM00091 182 248 1.4E-6 T 14-10-2018 IPR000014 PAS domain C3497_01670 cea15dd276cf2159b114e748e03fc983 686 SMART SM00091 23 89 25.0 T 14-10-2018 IPR000014 PAS domain C3497_01670 cea15dd276cf2159b114e748e03fc983 686 Gene3D G3DSA:3.30.450.20 15 143 1.7E-10 T 14-10-2018 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 418 538 4.4E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_01670 cea15dd276cf2159b114e748e03fc983 686 Pfam PF00512 His Kinase A (phospho-acceptor) domain 311 374 1.9E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 SUPERFAMILY SSF52172 560 678 1.29E-25 T 14-10-2018 IPR011006 CheY-like superfamily C3497_01670 cea15dd276cf2159b114e748e03fc983 686 Pfam PF12860 PAS fold 29 143 5.5E-39 T 14-10-2018 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 Pfam PF08448 PAS fold 188 296 8.6E-17 T 14-10-2018 IPR013656 PAS fold-4 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 Gene3D G3DSA:3.30.565.10 379 548 4.5E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_01670 cea15dd276cf2159b114e748e03fc983 686 SUPERFAMILY SSF55785 170 293 3.84E-20 T 14-10-2018 IPR035965 PAS domain superfamily C3497_01670 cea15dd276cf2159b114e748e03fc983 686 SMART SM00448 560 672 4.8E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01670 cea15dd276cf2159b114e748e03fc983 686 SMART SM00387 417 539 2.7E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_02490 4c5d94836377ceadd17041fcbf1a8de9 410 Gene3D G3DSA:3.90.220.20 16 211 4.7E-21 T 14-10-2018 C3497_02490 4c5d94836377ceadd17041fcbf1a8de9 410 SUPERFAMILY SSF116734 223 403 1.96E-31 T 14-10-2018 C3497_02490 4c5d94836377ceadd17041fcbf1a8de9 410 Pfam PF01420 Type I restriction modification DNA specificity domain 230 391 1.4E-19 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 C3497_02490 4c5d94836377ceadd17041fcbf1a8de9 410 Pfam PF01420 Type I restriction modification DNA specificity domain 113 199 1.6E-7 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 C3497_02490 4c5d94836377ceadd17041fcbf1a8de9 410 Gene3D G3DSA:3.90.220.20 219 359 5.0E-21 T 14-10-2018 C3497_02490 4c5d94836377ceadd17041fcbf1a8de9 410 SUPERFAMILY SSF116734 9 213 1.64E-27 T 14-10-2018 C3497_11045 411cb9a82e29f8de9d7c01f234e4d679 767 Pfam PF00271 Helicase conserved C-terminal domain 592 703 9.5E-7 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_11045 411cb9a82e29f8de9d7c01f234e4d679 767 SUPERFAMILY SSF52540 77 420 1.61E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11045 411cb9a82e29f8de9d7c01f234e4d679 767 SUPERFAMILY SSF52540 359 744 2.13E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11045 411cb9a82e29f8de9d7c01f234e4d679 767 Gene3D G3DSA:3.40.50.300 74 180 3.2E-8 T 14-10-2018 C3497_11045 411cb9a82e29f8de9d7c01f234e4d679 767 Gene3D G3DSA:3.40.50.10810 319 465 3.7E-7 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily C3497_11045 411cb9a82e29f8de9d7c01f234e4d679 767 Gene3D G3DSA:3.40.50.300 503 757 2.5E-24 T 14-10-2018 C3497_11045 411cb9a82e29f8de9d7c01f234e4d679 767 SMART SM00487 77 421 1.6E-8 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_02085 14bb119595b5281c4f394df32ee9cf49 178 Pfam PF13581 Histidine kinase-like ATPase domain 31 167 2.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_02085 14bb119595b5281c4f394df32ee9cf49 178 Gene3D G3DSA:3.30.565.10 17 174 1.8E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_02085 14bb119595b5281c4f394df32ee9cf49 178 SUPERFAMILY SSF55874 44 153 1.74E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_13385 830309c799a3d49a98647d2626cfa347 166 Hamap MF_00269 Thiol peroxidase [tpx]. 3 166 36.007 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 C3497_13385 830309c799a3d49a98647d2626cfa347 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 C3497_13385 830309c799a3d49a98647d2626cfa347 166 Pfam PF08534 Redoxin 20 162 1.7E-23 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 C3497_13385 830309c799a3d49a98647d2626cfa347 166 SUPERFAMILY SSF52833 1 163 5.41E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_13385 830309c799a3d49a98647d2626cfa347 166 Gene3D G3DSA:3.40.30.10 1 166 9.6E-44 T 14-10-2018 C3497_07010 2e147aefb30fd948951a1a94b790d209 106 Gene3D G3DSA:3.10.20.280 1 90 7.4E-31 T 14-10-2018 IPR037021 RnfH superfamily C3497_07010 2e147aefb30fd948951a1a94b790d209 106 Pfam PF03658 RnfH family Ubiquitin 5 88 1.2E-33 T 14-10-2018 IPR005346 RnfH protein C3497_07010 2e147aefb30fd948951a1a94b790d209 106 Hamap MF_00460 Protein RnfH [rnfH]. 5 96 25.045 T 14-10-2018 IPR005346 RnfH protein C3497_07010 2e147aefb30fd948951a1a94b790d209 106 SUPERFAMILY SSF54285 4 80 6.28E-24 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp C3497_14405 7352cc772d80825c41cf850ba8223c39 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 14 117 3.3E-16 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C3497_14405 7352cc772d80825c41cf850ba8223c39 119 SUPERFAMILY SSF54211 11 117 2.53E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_14405 7352cc772d80825c41cf850ba8223c39 119 Pfam PF00825 Ribonuclease P 13 117 8.6E-26 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C3497_14405 7352cc772d80825c41cf850ba8223c39 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 19 97 2.0E-20 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C3497_14405 7352cc772d80825c41cf850ba8223c39 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 61 75 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 C3497_14405 7352cc772d80825c41cf850ba8223c39 119 Gene3D G3DSA:3.30.230.10 7 119 3.0E-29 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_14405 7352cc772d80825c41cf850ba8223c39 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 11 116 14.721 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C3497_09285 83477f5295e11d8c8ff1fab913481652 104 Pfam PF04347 Flagellar biosynthesis protein, FliO 17 96 2.3E-19 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 C3497_09285 83477f5295e11d8c8ff1fab913481652 104 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 5 71 8.9E-19 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 C3497_14180 a0b9d68146603662d2248fd1cf96b1a9 450 Gene3D G3DSA:1.10.3430.10 21 450 3.0E-138 T 14-10-2018 IPR029020 Ammonium/urea transporter C3497_14180 a0b9d68146603662d2248fd1cf96b1a9 450 ProSitePatterns PS01219 Ammonium transporters signature. 205 230 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 C3497_14180 a0b9d68146603662d2248fd1cf96b1a9 450 TIGRFAM TIGR00836 amt: ammonium transporter 47 448 2.5E-135 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 C3497_14180 a0b9d68146603662d2248fd1cf96b1a9 450 Pfam PF00909 Ammonium Transporter Family 49 448 3.3E-122 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 C3497_14180 a0b9d68146603662d2248fd1cf96b1a9 450 SUPERFAMILY SSF111352 43 429 1.7E-127 T 14-10-2018 C3497_14180 a0b9d68146603662d2248fd1cf96b1a9 450 PRINTS PR00342 Rhesus blood group protein signature 148 164 6.5E-9 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C3497_14180 a0b9d68146603662d2248fd1cf96b1a9 450 PRINTS PR00342 Rhesus blood group protein signature 330 348 6.5E-9 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C3497_14180 a0b9d68146603662d2248fd1cf96b1a9 450 PRINTS PR00342 Rhesus blood group protein signature 244 262 6.5E-9 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C3497_14180 a0b9d68146603662d2248fd1cf96b1a9 450 PRINTS PR00342 Rhesus blood group protein signature 275 297 6.5E-9 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C3497_05490 0f82d591268ea040902eae38435839ca 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 191 8.3E-104 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_05490 0f82d591268ea040902eae38435839ca 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 1.0E-29 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C3497_05490 0f82d591268ea040902eae38435839ca 199 Gene3D G3DSA:1.10.10.10 123 192 6.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_05490 0f82d591268ea040902eae38435839ca 199 SUPERFAMILY SSF88946 2 110 5.81E-31 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C3497_05490 0f82d591268ea040902eae38435839ca 199 Pfam PF04542 Sigma-70 region 2 25 92 4.2E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C3497_05490 0f82d591268ea040902eae38435839ca 199 Gene3D G3DSA:1.10.1740.10 1 122 1.0E-40 T 14-10-2018 C3497_05490 0f82d591268ea040902eae38435839ca 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_05490 0f82d591268ea040902eae38435839ca 199 SUPERFAMILY SSF88659 125 187 7.85E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3497_05490 0f82d591268ea040902eae38435839ca 199 Pfam PF08281 Sigma-70, region 4 133 182 1.8E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_04290 806e2e114d94dfa70ed61ba36bc4fdb6 276 Gene3D G3DSA:3.40.50.300 28 274 3.9E-63 T 14-10-2018 C3497_04290 806e2e114d94dfa70ed61ba36bc4fdb6 276 SUPERFAMILY SSF52540 26 262 1.62E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04290 806e2e114d94dfa70ed61ba36bc4fdb6 276 Pfam PF00005 ABC transporter 47 200 1.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_04290 806e2e114d94dfa70ed61ba36bc4fdb6 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_04290 806e2e114d94dfa70ed61ba36bc4fdb6 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 7.0E-121 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 C3497_04290 806e2e114d94dfa70ed61ba36bc4fdb6 276 SMART SM00382 54 256 1.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_04190 e8190e39530eedad6c807b54bab3474c 365 ProSitePatterns PS00534 Ferrochelatase signature. 206 224 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C3497_04190 e8190e39530eedad6c807b54bab3474c 365 Gene3D G3DSA:3.40.50.1400 180 318 1.6E-99 T 14-10-2018 C3497_04190 e8190e39530eedad6c807b54bab3474c 365 Hamap MF_00323 Ferrochelatase [hemH]. 16 337 37.589 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C3497_04190 e8190e39530eedad6c807b54bab3474c 365 Gene3D G3DSA:3.40.50.1400 18 337 1.6E-99 T 14-10-2018 C3497_04190 e8190e39530eedad6c807b54bab3474c 365 Pfam PF00762 Ferrochelatase 17 337 1.2E-116 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C3497_04190 e8190e39530eedad6c807b54bab3474c 365 TIGRFAM TIGR00109 hemH: ferrochelatase 16 337 4.4E-95 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C3497_04190 e8190e39530eedad6c807b54bab3474c 365 SUPERFAMILY SSF53800 16 342 7.85E-112 T 14-10-2018 C3497_08725 d1028a9c5abc3ab41d4c94ba2c226402 318 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 286 2.9E-89 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 C3497_08725 d1028a9c5abc3ab41d4c94ba2c226402 318 Gene3D G3DSA:3.40.50.300 12 287 5.1E-95 T 14-10-2018 C3497_08725 d1028a9c5abc3ab41d4c94ba2c226402 318 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 316 29.029 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 C3497_08725 d1028a9c5abc3ab41d4c94ba2c226402 318 Gene3D G3DSA:1.10.20.140 115 187 5.1E-95 T 14-10-2018 C3497_08725 d1028a9c5abc3ab41d4c94ba2c226402 318 Pfam PF01715 IPP transferase 42 285 1.4E-84 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 C3497_08725 d1028a9c5abc3ab41d4c94ba2c226402 318 SUPERFAMILY SSF52540 10 152 9.15E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11450 20475cc3d93411e94c3d0351bcbc9672 298 SMART SM00382 30 210 3.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_11450 20475cc3d93411e94c3d0351bcbc9672 298 SUPERFAMILY SSF52540 5 229 1.16E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11450 20475cc3d93411e94c3d0351bcbc9672 298 Gene3D G3DSA:3.40.50.300 2 238 7.1E-65 T 14-10-2018 C3497_11450 20475cc3d93411e94c3d0351bcbc9672 298 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_11450 20475cc3d93411e94c3d0351bcbc9672 298 Pfam PF00005 ABC transporter 22 163 8.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_12310 b004e23614ec3b52b2e13ff1d6aa4649 265 PIRSF PIRSF000903 1 265 2.5E-107 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 C3497_12310 b004e23614ec3b52b2e13ff1d6aa4649 265 Gene3D G3DSA:3.60.21.10 1 265 2.3E-77 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C3497_12310 b004e23614ec3b52b2e13ff1d6aa4649 265 Pfam PF00149 Calcineurin-like phosphoesterase 2 130 1.4E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C3497_12310 b004e23614ec3b52b2e13ff1d6aa4649 265 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 265 44.626 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 C3497_12310 b004e23614ec3b52b2e13ff1d6aa4649 265 SUPERFAMILY SSF56300 3 256 1.9E-55 T 14-10-2018 C3497_12310 b004e23614ec3b52b2e13ff1d6aa4649 265 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 260 1.4E-85 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 C3497_14650 7fa99dbe7fa43c1b86e5f804a5ffe165 375 Gene3D G3DSA:2.60.410.10 267 356 1.2E-29 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_14650 7fa99dbe7fa43c1b86e5f804a5ffe165 375 SUPERFAMILY SSF69189 267 359 4.9E-24 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_14650 7fa99dbe7fa43c1b86e5f804a5ffe165 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 147 2.8E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3497_14650 7fa99dbe7fa43c1b86e5f804a5ffe165 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 54 65 2.8E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3497_14650 7fa99dbe7fa43c1b86e5f804a5ffe165 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 107 124 2.8E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3497_14650 7fa99dbe7fa43c1b86e5f804a5ffe165 375 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 20 247 3.9E-80 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 C3497_14650 7fa99dbe7fa43c1b86e5f804a5ffe165 375 SUPERFAMILY SSF56601 3 267 2.55E-87 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3497_14650 7fa99dbe7fa43c1b86e5f804a5ffe165 375 SMART SM00936 267 357 1.3E-33 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_14650 7fa99dbe7fa43c1b86e5f804a5ffe165 375 Gene3D G3DSA:3.40.710.10 11 265 3.7E-89 T 14-10-2018 C3497_14650 7fa99dbe7fa43c1b86e5f804a5ffe165 375 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 267 356 1.7E-21 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_10880 6e53a01ce7b2474410a99a2e44736e13 126 PIRSF PIRSF002070 1 125 1.0E-17 T 14-10-2018 C3497_10880 6e53a01ce7b2474410a99a2e44736e13 126 Gene3D G3DSA:2.40.50.140 2 109 6.1E-21 T 14-10-2018 C3497_10880 6e53a01ce7b2474410a99a2e44736e13 126 SUPERFAMILY SSF50249 2 116 2.09E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_10880 6e53a01ce7b2474410a99a2e44736e13 126 Pfam PF00436 Single-strand binding protein family 8 108 6.3E-14 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 C3497_12240 822480a949e74168a991676bca726059 456 SUPERFAMILY SSF53623 95 307 5.5E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_12240 822480a949e74168a991676bca726059 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 447 57.653 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 C3497_12240 822480a949e74168a991676bca726059 456 Gene3D G3DSA:3.90.190.20 313 448 2.9E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_12240 822480a949e74168a991676bca726059 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 446 2.3E-209 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 C3497_12240 822480a949e74168a991676bca726059 456 Pfam PF08245 Mur ligase middle domain 108 290 1.9E-20 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3497_12240 822480a949e74168a991676bca726059 456 Pfam PF01225 Mur ligase family, catalytic domain 2 99 1.6E-18 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C3497_12240 822480a949e74168a991676bca726059 456 Gene3D G3DSA:3.40.1190.10 91 312 7.7E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_12240 822480a949e74168a991676bca726059 456 SUPERFAMILY SSF51984 1 90 6.28E-21 T 14-10-2018 C3497_12240 822480a949e74168a991676bca726059 456 Gene3D G3DSA:3.40.50.720 1 90 1.1E-35 T 14-10-2018 C3497_12240 822480a949e74168a991676bca726059 456 SUPERFAMILY SSF53244 309 446 2.22E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_12240 822480a949e74168a991676bca726059 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 368 3.7E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C3497_03070 f9225f092d2da3b369aaa2d7103383bf 214 SUPERFAMILY SSF53955 79 185 1.76E-28 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_03070 f9225f092d2da3b369aaa2d7103383bf 214 Pfam PF01464 Transglycosylase SLT domain 92 182 5.6E-16 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3497_03070 f9225f092d2da3b369aaa2d7103383bf 214 Gene3D G3DSA:1.10.530.10 84 208 5.7E-22 T 14-10-2018 C3497_02825 e6c713e5709fbf55c183c90a5bbed02c 293 SUPERFAMILY SSF117892 53 191 2.48E-31 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily C3497_02825 e6c713e5709fbf55c183c90a5bbed02c 293 TIGRFAM TIGR01932 hflC: HflC protein 145 285 1.3E-49 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 C3497_02825 e6c713e5709fbf55c183c90a5bbed02c 293 PRINTS PR00721 Stomatin signature 180 201 3.6E-6 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3497_02825 e6c713e5709fbf55c183c90a5bbed02c 293 PRINTS PR00721 Stomatin signature 161 179 3.6E-6 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3497_02825 e6c713e5709fbf55c183c90a5bbed02c 293 PRINTS PR00721 Stomatin signature 77 98 3.6E-6 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3497_02825 e6c713e5709fbf55c183c90a5bbed02c 293 PRINTS PR00721 Stomatin signature 28 50 3.6E-6 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3497_02825 e6c713e5709fbf55c183c90a5bbed02c 293 PIRSF PIRSF005651 1 293 8.7E-94 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 C3497_02825 e6c713e5709fbf55c183c90a5bbed02c 293 Pfam PF01145 SPFH domain / Band 7 family 25 201 5.6E-27 T 14-10-2018 IPR001107 Band 7 domain C3497_02825 e6c713e5709fbf55c183c90a5bbed02c 293 Gene3D G3DSA:3.30.479.30 50 187 1.3E-26 T 14-10-2018 C3497_02825 e6c713e5709fbf55c183c90a5bbed02c 293 SMART SM00244 21 185 9.6E-31 T 14-10-2018 IPR001107 Band 7 domain C3497_09595 f0f67e04c8a20aa26b9a9a34051592bb 234 SUPERFAMILY SSF103088 111 230 1.27E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_09595 f0f67e04c8a20aa26b9a9a34051592bb 234 Pfam PF00691 OmpA family 120 213 1.3E-22 T 14-10-2018 IPR006665 OmpA-like domain C3497_09595 f0f67e04c8a20aa26b9a9a34051592bb 234 Gene3D G3DSA:3.30.1330.60 93 234 4.7E-52 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_09595 f0f67e04c8a20aa26b9a9a34051592bb 234 PRINTS PR01022 Outer membrane protein A signature 109 124 9.3E-8 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 C3497_09595 f0f67e04c8a20aa26b9a9a34051592bb 234 PRINTS PR01022 Outer membrane protein A signature 209 222 9.3E-8 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 C3497_09595 f0f67e04c8a20aa26b9a9a34051592bb 234 PRINTS PR01022 Outer membrane protein A signature 175 194 9.3E-8 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 C3497_09595 f0f67e04c8a20aa26b9a9a34051592bb 234 PRINTS PR01021 OMPA domain signature 121 143 3.6E-21 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_09595 f0f67e04c8a20aa26b9a9a34051592bb 234 PRINTS PR01021 OMPA domain signature 166 182 3.6E-21 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_09595 f0f67e04c8a20aa26b9a9a34051592bb 234 PRINTS PR01021 OMPA domain signature 151 166 3.6E-21 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3497_09595 f0f67e04c8a20aa26b9a9a34051592bb 234 ProSitePatterns PS01068 OmpA-like domain. 153 197 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 C3497_11965 cd28faf0cb21bf782d0eadb0449d92da 189 Pfam PF14341 PilX N-terminal 11 61 2.5E-13 T 14-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain C3497_11965 cd28faf0cb21bf782d0eadb0449d92da 189 Pfam PF13681 Type IV pilus assembly protein PilX C-term 100 187 1.6E-14 T 14-10-2018 IPR025205 PilX/PilW C-terminal domain C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 SUPERFAMILY SSF56935 21 340 8.24E-76 T 14-10-2018 C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 PRINTS PR00184 Neisseria sp. porin signature 189 206 7.5E-12 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 PRINTS PR00184 Neisseria sp. porin signature 154 171 7.5E-12 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 PRINTS PR00184 Neisseria sp. porin signature 52 77 7.5E-12 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 93 103 8.5E-11 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 50 61 8.5E-11 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 8.5E-11 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 289 306 8.5E-11 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 188 200 8.5E-11 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 Gene3D G3DSA:2.40.160.10 21 340 8.7E-85 T 14-10-2018 IPR023614 Porin domain superfamily C3497_12850 51752df29b1bcabb514abc7e047f3afb 340 Pfam PF13609 Gram-negative porin 7 315 8.4E-63 T 14-10-2018 C3497_06610 26d43b571e90177b8a9614da44049201 194 Gene3D G3DSA:2.40.500.20 84 194 4.2E-37 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 PIRSF PIRSF000349 1 194 7.5E-79 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 SUPERFAMILY SSF46609 1 88 4.32E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 83 3.0E-33 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 SUPERFAMILY SSF54719 85 193 1.57E-39 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 7.5E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 PRINTS PR01703 Manganese superoxide dismutase signature 66 79 7.5E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 7.5E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 7.5E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 PRINTS PR01703 Manganese superoxide dismutase signature 119 127 7.5E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 191 7.3E-33 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_06610 26d43b571e90177b8a9614da44049201 194 Gene3D G3DSA:1.10.287.990 20 82 6.2E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 SUPERFAMILY SSF51735 230 389 1.65E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 SMART SM00997 230 389 6.5E-116 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 SMART SM00996 9 468 0.0 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 SUPERFAMILY SSF52283 8 469 9.07E-116 T 14-10-2018 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 Gene3D G3DSA:3.40.50.720 232 389 4.0E-241 T 14-10-2018 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 9 468 5.3E-147 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 Gene3D G3DSA:3.40.50.1480 10 469 4.0E-241 T 14-10-2018 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 5 461 49.145 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 252 268 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 10 461 8.8E-189 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 PIRSF PIRSF001109 1 469 1.9E-191 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 81 95 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3497_01295 f26575314b716c8910c1a7ab81f37ffa 469 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 230 389 1.8E-82 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3497_06605 689610f21f203c62f1cba2fdd85a82e7 258 Gene3D G3DSA:3.20.20.140 1 250 1.2E-76 T 14-10-2018 C3497_06605 689610f21f203c62f1cba2fdd85a82e7 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 C3497_06605 689610f21f203c62f1cba2fdd85a82e7 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 C3497_06605 689610f21f203c62f1cba2fdd85a82e7 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 187 203 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 C3497_06605 689610f21f203c62f1cba2fdd85a82e7 258 SUPERFAMILY SSF51556 2 249 2.27E-79 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3497_06605 689610f21f203c62f1cba2fdd85a82e7 258 Pfam PF01026 TatD related DNase 3 249 1.2E-66 T 14-10-2018 IPR001130 TatD family GO:0016788 C3497_06605 689610f21f203c62f1cba2fdd85a82e7 258 PIRSF PIRSF005902 1 251 1.9E-64 T 14-10-2018 IPR001130 TatD family GO:0016788 C3497_12405 955a860d2df4296e081991cde8fbad23 93 SUPERFAMILY SSF50037 19 84 4.12E-9 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal C3497_12405 955a860d2df4296e081991cde8fbad23 93 Gene3D G3DSA:2.30.30.90 13 93 4.2E-14 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain C3497_12405 955a860d2df4296e081991cde8fbad23 93 Pfam PF04023 FeoA domain 15 83 1.6E-11 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 C3497_12405 955a860d2df4296e081991cde8fbad23 93 SMART SM00899 14 84 2.8E-10 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 C3497_05415 31f19a1daac9a26b2cea21d1a7bf64a4 948 Pfam PF00575 S1 RNA binding domain 36 116 2.7E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3497_05415 31f19a1daac9a26b2cea21d1a7bf64a4 948 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 1.3E-161 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 C3497_05415 31f19a1daac9a26b2cea21d1a7bf64a4 948 SUPERFAMILY SSF50249 40 123 5.02E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_05415 31f19a1daac9a26b2cea21d1a7bf64a4 948 Pfam PF10150 Ribonuclease E/G family 119 388 3.4E-96 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 C3497_05415 31f19a1daac9a26b2cea21d1a7bf64a4 948 SMART SM00316 37 117 3.4E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_05415 31f19a1daac9a26b2cea21d1a7bf64a4 948 Gene3D G3DSA:3.40.1260.20 398 509 4.0E-37 T 14-10-2018 C3497_05415 31f19a1daac9a26b2cea21d1a7bf64a4 948 Hamap MF_00970 Ribonuclease E [rne]. 1 939 33.523 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 C3497_05415 31f19a1daac9a26b2cea21d1a7bf64a4 948 Gene3D G3DSA:2.40.50.140 31 123 7.1E-30 T 14-10-2018 C3497_06155 682f032345663ef0e19c71a603763d4e 409 Gene3D G3DSA:3.90.1150.10 11 380 5.7E-146 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_06155 682f032345663ef0e19c71a603763d4e 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 200 219 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site C3497_06155 682f032345663ef0e19c71a603763d4e 409 SUPERFAMILY SSF53383 10 382 1.71E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_06155 682f032345663ef0e19c71a603763d4e 409 PIRSF PIRSF005572 8 388 1.0E-130 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 C3497_06155 682f032345663ef0e19c71a603763d4e 409 Gene3D G3DSA:3.40.640.10 22 263 5.7E-146 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_06155 682f032345663ef0e19c71a603763d4e 409 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 11 390 1.7E-191 T 14-10-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 C3497_06155 682f032345663ef0e19c71a603763d4e 409 Pfam PF00266 Aminotransferase class-V 11 373 3.3E-92 T 14-10-2018 IPR000192 Aminotransferase class V domain C3497_02945 2c70dfdf19607e170b962b723c4eefdc 107 PIRSF PIRSF004555 2 107 3.3E-36 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C3497_02945 2c70dfdf19607e170b962b723c4eefdc 107 Gene3D G3DSA:3.30.1310.10 1 107 1.0E-41 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily C3497_02945 2c70dfdf19607e170b962b723c4eefdc 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 96 23.243 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C3497_02945 2c70dfdf19607e170b962b723c4eefdc 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 9.3E-33 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C3497_02945 2c70dfdf19607e170b962b723c4eefdc 107 SUPERFAMILY SSF82607 10 101 4.97E-34 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily C3497_02945 2c70dfdf19607e170b962b723c4eefdc 107 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 2.3E-32 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C3497_14235 e7cb841b079c5cb1e72e9bdebe58678a 435 SUPERFAMILY SSF56059 269 356 1.81E-5 T 14-10-2018 C3497_14235 e7cb841b079c5cb1e72e9bdebe58678a 435 Pfam PF08886 Glutamate-cysteine ligase 17 419 4.3E-201 T 14-10-2018 IPR011718 Glutamate--cysteine ligase GshA C3497_14235 e7cb841b079c5cb1e72e9bdebe58678a 435 Gene3D G3DSA:3.40.50.11280 65 204 2.3E-50 T 14-10-2018 C3497_14235 e7cb841b079c5cb1e72e9bdebe58678a 435 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 18 422 8.0E-189 T 14-10-2018 IPR011718 Glutamate--cysteine ligase GshA C3497_01930 0098e759be3b8c9cc6070e3e0bcf30bb 131 Pfam PF00410 Ribosomal protein S8 5 130 5.7E-50 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01930 0098e759be3b8c9cc6070e3e0bcf30bb 131 SUPERFAMILY SSF56047 2 130 1.44E-47 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01930 0098e759be3b8c9cc6070e3e0bcf30bb 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01930 0098e759be3b8c9cc6070e3e0bcf30bb 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.581 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01930 0098e759be3b8c9cc6070e3e0bcf30bb 131 Gene3D G3DSA:3.30.1370.30 2 73 5.7E-29 T 14-10-2018 C3497_01930 0098e759be3b8c9cc6070e3e0bcf30bb 131 Gene3D G3DSA:3.30.1490.10 74 131 8.9E-25 T 14-10-2018 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 SUPERFAMILY SSF54292 1 89 1.7E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 Pfam PF00175 Oxidoreductase NAD-binding domain 209 314 3.0E-20 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 Gene3D G3DSA:3.40.50.80 200 336 1.8E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 SUPERFAMILY SSF52343 201 335 6.68E-39 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 SUPERFAMILY SSF63380 102 199 5.55E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 2.6E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 2.6E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 300 308 2.6E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 233 242 2.6E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 81 4.2E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 Pfam PF00970 Oxidoreductase FAD-binding domain 105 197 6.0E-16 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 Gene3D G3DSA:3.10.20.30 1 95 1.2E-25 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 9.9E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 9.9E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 9.9E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 9.9E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 9.9E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 9.9E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_02115 b654735cd45dacf0e3240cd4d5827f12 338 Gene3D G3DSA:2.40.30.10 102 199 7.3E-28 T 14-10-2018 C3497_04280 8d2451cda306995382c939931e3e4459 878 SUPERFAMILY SSF69322 276 447 1.05E-5 T 14-10-2018 C3497_04280 8d2451cda306995382c939931e3e4459 878 Gene3D G3DSA:1.10.3720.10 641 875 2.5E-21 T 14-10-2018 IPR035906 MetI-like superfamily C3497_04280 8d2451cda306995382c939931e3e4459 878 SUPERFAMILY SSF161098 489 592 5.76E-8 T 14-10-2018 IPR035906 MetI-like superfamily C3497_04280 8d2451cda306995382c939931e3e4459 878 Gene3D G3DSA:1.10.3720.10 461 599 2.7E-5 T 14-10-2018 IPR035906 MetI-like superfamily C3497_04280 8d2451cda306995382c939931e3e4459 878 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 697 874 5.0E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_04280 8d2451cda306995382c939931e3e4459 878 SUPERFAMILY SSF161098 603 865 2.09E-17 T 14-10-2018 IPR035906 MetI-like superfamily C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 8 181 2.8E-32 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 PIRSF PIRSF000124 7 422 1.3E-49 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 412 1.3E-117 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 PIRSF PIRSF500136 2 425 7.8E-146 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 Gene3D G3DSA:3.40.50.720 2 199 1.0E-57 T 14-10-2018 C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 416 3.9E-19 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 291 1.9E-23 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 Gene3D G3DSA:3.40.50.720 202 424 1.6E-53 T 14-10-2018 C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 SUPERFAMILY SSF52413 301 416 6.15E-27 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 SUPERFAMILY SSF51735 9 192 2.13E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 SUPERFAMILY SSF48179 201 292 2.21E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_01450 b16281e7acdfa9c656c3ba951b76998e 425 SMART SM00984 318 418 1.4E-31 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_08475 66de48839f57387c8e61f641cdc5f225 473 Gene3D G3DSA:3.40.50.11290 211 309 2.8E-45 T 14-10-2018 C3497_08475 66de48839f57387c8e61f641cdc5f225 473 PIRSF PIRSF005522 1 473 1.0E-235 T 14-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 C3497_08475 66de48839f57387c8e61f641cdc5f225 473 Pfam PF14403 Circularly permuted ATP-grasp type 2 74 449 3.5E-167 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 C3497_08475 66de48839f57387c8e61f641cdc5f225 473 SUPERFAMILY SSF56059 16 464 7.99E-66 T 14-10-2018 C3497_08475 66de48839f57387c8e61f641cdc5f225 473 Gene3D G3DSA:3.30.1490.270 346 406 6.7E-26 T 14-10-2018 C3497_12575 df278a95deccd1c6fb55af6a2f72a623 672 Gene3D G3DSA:3.30.70.2330 574 669 7.6E-20 T 14-10-2018 C3497_12575 df278a95deccd1c6fb55af6a2f72a623 672 Pfam PF14284 PcfJ-like protein 421 499 2.3E-6 T 14-10-2018 IPR025586 PcfJ-like protein C3497_12575 df278a95deccd1c6fb55af6a2f72a623 672 Pfam PF08797 HIRAN domain 581 648 9.8E-9 T 14-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 C3497_12575 df278a95deccd1c6fb55af6a2f72a623 672 SMART SM00910 576 672 1.4E-12 T 14-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 C3497_00795 fd12392e179549da9bbab9e555cea100 510 Gene3D G3DSA:1.10.1040.50 193 502 1.1E-90 T 14-10-2018 C3497_00795 fd12392e179549da9bbab9e555cea100 510 SUPERFAMILY SSF51735 9 189 4.76E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_00795 fd12392e179549da9bbab9e555cea100 510 TIGRFAM TIGR02279 PaaC-3OHAcCoADH: 3-hydroxyacyl-CoA dehydrogenase PaaC 3 509 2.5E-226 T 14-10-2018 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC GO:0008691|GO:0010124 C3497_00795 fd12392e179549da9bbab9e555cea100 510 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 427 504 2.0E-12 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3497_00795 fd12392e179549da9bbab9e555cea100 510 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 287 2.7E-32 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3497_00795 fd12392e179549da9bbab9e555cea100 510 Gene3D G3DSA:3.30.750.190 301 419 1.1E-90 T 14-10-2018 C3497_00795 fd12392e179549da9bbab9e555cea100 510 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 187 2.7E-58 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3497_00795 fd12392e179549da9bbab9e555cea100 510 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 187 211 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3497_00795 fd12392e179549da9bbab9e555cea100 510 SUPERFAMILY SSF48179 419 509 1.19E-16 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_00795 fd12392e179549da9bbab9e555cea100 510 SUPERFAMILY SSF48179 189 298 4.85E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_00795 fd12392e179549da9bbab9e555cea100 510 Gene3D G3DSA:3.40.50.720 6 192 3.6E-63 T 14-10-2018 C3497_02225 8b42df7e138f37b936fd5ced7971b5c6 121 SUPERFAMILY SSF52172 4 120 1.85E-41 T 14-10-2018 IPR011006 CheY-like superfamily C3497_02225 8b42df7e138f37b936fd5ced7971b5c6 121 Gene3D G3DSA:3.40.50.12740 4 121 3.8E-48 T 14-10-2018 C3497_02225 8b42df7e138f37b936fd5ced7971b5c6 121 Pfam PF00072 Response regulator receiver domain 6 117 7.0E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_02225 8b42df7e138f37b936fd5ced7971b5c6 121 SMART SM00448 4 117 1.6E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_06400 e204088325ce7a9dd8ba77d3a1d07d14 276 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 69 275 2.4E-70 T 14-10-2018 C3497_06400 e204088325ce7a9dd8ba77d3a1d07d14 276 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 71 242 4.9E-35 T 14-10-2018 C3497_06400 e204088325ce7a9dd8ba77d3a1d07d14 276 SUPERFAMILY SSF56784 71 275 2.53E-53 T 14-10-2018 IPR036412 HAD-like superfamily C3497_06400 e204088325ce7a9dd8ba77d3a1d07d14 276 Pfam PF13284 Domain of unknown function (DUF4072) 3 45 7.8E-9 T 14-10-2018 IPR025138 Domain of unknown function DUF4072 C3497_06400 e204088325ce7a9dd8ba77d3a1d07d14 276 Pfam PF12710 haloacid dehalogenase-like hydrolase 73 241 1.1E-25 T 14-10-2018 C3497_06400 e204088325ce7a9dd8ba77d3a1d07d14 276 Gene3D G3DSA:3.40.50.1000 3 276 2.5E-78 T 14-10-2018 IPR023214 HAD superfamily C3497_12300 b69cebcb41783ac92eeffae03e8b3a21 252 SUPERFAMILY SSF55729 17 223 4.46E-46 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_12300 b69cebcb41783ac92eeffae03e8b3a21 252 Gene3D G3DSA:3.40.630.30 21 163 3.5E-28 T 14-10-2018 C3497_12300 b69cebcb41783ac92eeffae03e8b3a21 252 Pfam PF13444 Acetyltransferase (GNAT) domain 33 134 8.2E-35 T 14-10-2018 C3497_08625 019826a2e7735783f2c3d730dd50c66f 117 Pfam PF17336 Family of unknown function (DUF5368) 1 110 6.0E-41 T 14-10-2018 IPR035308 Protein of unknown function DUF5368 C3497_08625 019826a2e7735783f2c3d730dd50c66f 117 ProDom PD396235 MEMBRANE PM1478 TRANSMEMBRANE 1 106 8.0E-4 T 14-10-2018 IPR035308 Protein of unknown function DUF5368 C3497_08650 42d63250122a8c166140aa6dd21bd8a7 379 PIRSF PIRSF000267 3 378 1.1E-120 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 C3497_08650 42d63250122a8c166140aa6dd21bd8a7 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 362 1.0E-107 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 C3497_08650 42d63250122a8c166140aa6dd21bd8a7 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 379 2.8E-150 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 C3497_06245 829db6c79c13d9f454e4a2a3ae0b240c 191 SUPERFAMILY SSF54862 39 169 3.46E-23 T 14-10-2018 C3497_06245 829db6c79c13d9f454e4a2a3ae0b240c 191 Pfam PF14697 4Fe-4S dicluster domain 103 156 1.7E-12 T 14-10-2018 C3497_06245 829db6c79c13d9f454e4a2a3ae0b240c 191 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 176 1.1E-57 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 C3497_06245 829db6c79c13d9f454e4a2a3ae0b240c 191 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_06245 829db6c79c13d9f454e4a2a3ae0b240c 191 Gene3D G3DSA:1.10.15.40 34 80 3.9E-9 T 14-10-2018 C3497_06245 829db6c79c13d9f454e4a2a3ae0b240c 191 Gene3D G3DSA:3.30.70.20 81 168 1.5E-15 T 14-10-2018 C3497_06245 829db6c79c13d9f454e4a2a3ae0b240c 191 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 1 162 22.541 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 C3497_06245 829db6c79c13d9f454e4a2a3ae0b240c 191 Pfam PF04060 Putative Fe-S cluster 42 73 9.2E-11 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 C3497_06245 829db6c79c13d9f454e4a2a3ae0b240c 191 PIRSF PIRSF005784 1 184 1.1E-57 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 C3497_08750 b725d153fdce3a6f26c6aa4e9e70612f 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 280 7.1E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3497_08750 b725d153fdce3a6f26c6aa4e9e70612f 328 SUPERFAMILY SSF111369 43 238 4.45E-16 T 14-10-2018 C3497_08750 b725d153fdce3a6f26c6aa4e9e70612f 328 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 269 6.7E-29 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_08750 b725d153fdce3a6f26c6aa4e9e70612f 328 Gene3D G3DSA:1.10.287.470 82 187 1.8E-40 T 14-10-2018 C3497_08750 b725d153fdce3a6f26c6aa4e9e70612f 328 Gene3D G3DSA:2.40.50.100 48 222 1.8E-40 T 14-10-2018 C3497_08750 b725d153fdce3a6f26c6aa4e9e70612f 328 Gene3D G3DSA:2.40.30.170 43 270 1.8E-40 T 14-10-2018 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 Gene3D G3DSA:3.40.50.720 1 325 3.2E-115 T 14-10-2018 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 6.9E-23 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 106 119 6.9E-23 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 6.9E-23 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 6.9E-23 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 6.9E-23 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 97 4.7E-29 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 SUPERFAMILY SSF51735 1 167 4.96E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 312 4.9E-47 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 Gene3D G3DSA:3.30.360.10 150 315 3.2E-115 T 14-10-2018 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 SUPERFAMILY SSF55347 151 314 1.19E-54 T 14-10-2018 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 PIRSF PIRSF000149 1 335 1.9E-118 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03455 97a97ef48b72eedeb584f64289e82e55 339 SMART SM00846 1 151 5.2E-59 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 123 157 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 14 160 1.9E-52 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 12 163 46.341 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 Gene3D G3DSA:3.30.420.10 14 164 1.2E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 14 162 1.2E-53 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 SUPERFAMILY SSF53098 13 163 2.38E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 71 87 1.6E-33 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 15 28 1.6E-33 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 117 136 1.6E-33 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 148 160 1.6E-33 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3497_01250 e8832e2ebc84295f0ff5a9437d22c5c7 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 93 109 1.6E-33 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3497_03890 6e82d24ac16f785a79e5a496e255e388 363 Pfam PF08331 Domain of unknown function (DUF1730) 75 152 2.1E-24 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 C3497_03890 6e82d24ac16f785a79e5a496e255e388 363 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 27 361 7.0E-151 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 C3497_03890 6e82d24ac16f785a79e5a496e255e388 363 Pfam PF13484 4Fe-4S double cluster binding domain 204 268 1.6E-20 T 14-10-2018 C3497_03890 6e82d24ac16f785a79e5a496e255e388 363 SUPERFAMILY SSF54862 181 330 6.28E-18 T 14-10-2018 C3497_03890 6e82d24ac16f785a79e5a496e255e388 363 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 20 327 49.911 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 C3497_03890 6e82d24ac16f785a79e5a496e255e388 363 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 205 216 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_11670 37950fd36b44428b18b629f507e2d78a 893 PIRSF PIRSF000156 2 893 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 C3497_11670 37950fd36b44428b18b629f507e2d78a 893 SUPERFAMILY SSF52518 476 704 2.71E-95 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_11670 37950fd36b44428b18b629f507e2d78a 893 SUPERFAMILY SSF52922 706 892 2.27E-58 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3497_11670 37950fd36b44428b18b629f507e2d78a 893 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 89 303 4.8E-9 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3497_11670 37950fd36b44428b18b629f507e2d78a 893 Gene3D G3DSA:3.40.50.970 476 710 8.3E-108 T 14-10-2018 C3497_11670 37950fd36b44428b18b629f507e2d78a 893 SUPERFAMILY SSF52518 61 471 4.15E-132 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_11670 37950fd36b44428b18b629f507e2d78a 893 Gene3D G3DSA:3.40.50.920 711 893 3.7E-76 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3497_11670 37950fd36b44428b18b629f507e2d78a 893 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 10 892 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 C3497_11670 37950fd36b44428b18b629f507e2d78a 893 Gene3D G3DSA:3.40.50.970 60 475 1.4E-127 T 14-10-2018 C3497_08215 83558752a308cf10a97184d4885aab8c 313 Pfam PF03787 RAMP superfamily 9 303 1.0E-31 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein C3497_08215 83558752a308cf10a97184d4885aab8c 313 TIGRFAM TIGR02580 cas_RAMP_Cmr4: CRISPR type III-B/RAMP module RAMP protein Cmr4 7 303 2.0E-54 T 14-10-2018 IPR013410 CRISPR-associated RAMP Cmr4 C3497_05495 712635a4682d2c7fa3cef0e767683c04 178 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 2 85 3.0E-16 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 C3497_05495 712635a4682d2c7fa3cef0e767683c04 178 Gene3D G3DSA:1.10.10.880 1 66 5.6E-13 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 C3497_05495 712635a4682d2c7fa3cef0e767683c04 178 SUPERFAMILY SSF89069 1 66 1.83E-12 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 C3497_07490 5d927f4b8d6bce683e88717b5e3d5e0d 105 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 33.219 T 14-10-2018 IPR023081 Cell division protein FtsB C3497_07490 5d927f4b8d6bce683e88717b5e3d5e0d 105 Pfam PF04977 Septum formation initiator 11 89 4.8E-25 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC C3497_02735 c220ee345e69064f997c2c37d9b7af51 113 Gene3D G3DSA:3.30.160.100 3 104 2.9E-6 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like C3497_02735 c220ee345e69064f997c2c37d9b7af51 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 95 4.3E-5 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 C3497_02735 c220ee345e69064f997c2c37d9b7af51 113 SUPERFAMILY SSF69754 1 92 2.22E-11 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like C3497_11080 c8224f42d1e8fba9c4296f2c0f55bd66 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 249 8.3E-104 T 14-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type C3497_11080 c8224f42d1e8fba9c4296f2c0f55bd66 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 4.2E-77 T 14-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 SUPERFAMILY SSF53697 8 520 7.56E-172 T 14-10-2018 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 Gene3D G3DSA:3.40.50.10490 99 289 6.5E-189 T 14-10-2018 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 Pfam PF00342 Phosphoglucose isomerase 53 521 1.5E-159 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 Gene3D G3DSA:3.40.50.10490 13 501 6.5E-189 T 14-10-2018 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 478 492 1.1E-48 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 1.1E-48 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 492 505 1.1E-48 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 146 165 1.1E-48 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 460 478 1.1E-48 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 1.1E-48 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 Gene3D G3DSA:1.10.1390.10 502 536 4.7E-8 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 519 36.848 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_08445 d03f63c6ca94089bb0ee168357fd6d6d 545 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 492 509 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 Gene3D G3DSA:3.30.1370.120 388 451 1.4E-7 T 14-10-2018 IPR038591 NolW-like superfamily C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 Pfam PF03958 Bacterial type II/III secretion system short domain 390 454 4.4E-9 T 14-10-2018 IPR005644 NolW-like C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 Pfam PF11741 AMIN domain 54 138 2.7E-9 T 14-10-2018 IPR021731 AMIN domain C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 SMART SM00965 316 364 2.1E-10 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 Gene3D G3DSA:3.55.50.30 272 387 1.4E-42 T 14-10-2018 C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 Gene3D G3DSA:2.60.40.3500 25 141 4.8E-10 T 14-10-2018 C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 642 675 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 PRINTS PR00811 Bacterial general secretion pathway protein D signature 684 698 3.0E-19 T 14-10-2018 IPR001775 GspD/PilQ family C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 PRINTS PR00811 Bacterial general secretion pathway protein D signature 454 464 3.0E-19 T 14-10-2018 IPR001775 GspD/PilQ family C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 PRINTS PR00811 Bacterial general secretion pathway protein D signature 537 561 3.0E-19 T 14-10-2018 IPR001775 GspD/PilQ family C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 PRINTS PR00811 Bacterial general secretion pathway protein D signature 661 679 3.0E-19 T 14-10-2018 IPR001775 GspD/PilQ family C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 Pfam PF07660 Secretin and TonB N terminus short domain 316 363 1.0E-9 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 Pfam PF00263 Bacterial type II and III secretion system protein 541 696 5.3E-48 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 291 697 5.9E-150 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ C3497_00360 3f7bfe46516c459d7decd5c6ca1e89b3 703 Gene3D G3DSA:2.60.40.3470 150 271 2.0E-36 T 14-10-2018 C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 Pfam PF02780 Transketolase, C-terminal domain 559 663 6.2E-13 T 14-10-2018 IPR033248 Transketolase, C-terminal domain C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 Gene3D G3DSA:3.40.50.970 12 334 1.4E-132 T 14-10-2018 C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 TIGRFAM TIGR00232 tktlase_bact: transketolase 16 670 3.1E-293 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 ProSitePatterns PS00802 Transketolase signature 2. 475 491 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 Pfam PF02779 Transketolase, pyrimidine binding domain 362 532 5.7E-46 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 14 342 3.3E-162 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 Gene3D G3DSA:3.40.50.970 335 545 8.4E-83 T 14-10-2018 C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 SMART SM00861 363 533 1.6E-68 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 SUPERFAMILY SSF52518 11 329 9.91E-123 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 SUPERFAMILY SSF52922 543 671 1.71E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 SUPERFAMILY SSF52518 343 533 5.89E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 ProSitePatterns PS00801 Transketolase signature 1. 20 40 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3497_03465 67c0582cf157b0cbd968692fb47e8402 671 Gene3D G3DSA:3.40.50.920 547 671 4.3E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3497_12460 72f1c955f6b43b93b1d38faa9144d712 280 Gene3D G3DSA:3.40.50.150 20 223 9.4E-39 T 14-10-2018 C3497_12460 72f1c955f6b43b93b1d38faa9144d712 280 Pfam PF08241 Methyltransferase domain 54 153 1.3E-16 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C3497_12460 72f1c955f6b43b93b1d38faa9144d712 280 SUPERFAMILY SSF53335 18 265 4.91E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_13535 506495b0629e378e1046feea5c4f1525 158 PIRSF PIRSF002560 1 156 5.1E-74 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3497_13535 506495b0629e378e1046feea5c4f1525 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3497_13535 506495b0629e378e1046feea5c4f1525 158 PRINTS PR00601 Bacterioferritin signature 23 43 2.7E-70 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3497_13535 506495b0629e378e1046feea5c4f1525 158 PRINTS PR00601 Bacterioferritin signature 65 85 2.7E-70 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3497_13535 506495b0629e378e1046feea5c4f1525 158 PRINTS PR00601 Bacterioferritin signature 86 106 2.7E-70 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3497_13535 506495b0629e378e1046feea5c4f1525 158 PRINTS PR00601 Bacterioferritin signature 107 127 2.7E-70 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3497_13535 506495b0629e378e1046feea5c4f1525 158 PRINTS PR00601 Bacterioferritin signature 128 149 2.7E-70 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3497_13535 506495b0629e378e1046feea5c4f1525 158 PRINTS PR00601 Bacterioferritin signature 3 22 2.7E-70 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3497_13535 506495b0629e378e1046feea5c4f1525 158 PRINTS PR00601 Bacterioferritin signature 44 64 2.7E-70 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3497_13535 506495b0629e378e1046feea5c4f1525 158 Pfam PF00210 Ferritin-like domain 8 143 1.3E-38 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 C3497_13535 506495b0629e378e1046feea5c4f1525 158 SUPERFAMILY SSF47240 1 155 2.14E-57 T 14-10-2018 IPR009078 Ferritin-like superfamily C3497_13535 506495b0629e378e1046feea5c4f1525 158 Gene3D G3DSA:1.20.1260.10 1 157 1.5E-69 T 14-10-2018 IPR012347 Ferritin-like C3497_13535 506495b0629e378e1046feea5c4f1525 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 3.3E-76 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3497_05060 c3460127e65cb71954b24e02ea58367e 103 Gene3D G3DSA:3.30.70.120 3 103 2.0E-27 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C3497_05060 c3460127e65cb71954b24e02ea58367e 103 SUPERFAMILY SSF54913 3 101 1.43E-18 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 Gene3D G3DSA:3.40.50.300 1 211 1.8E-75 T 14-10-2018 C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 SMART SM00487 25 218 1.2E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 555 44.523 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 Gene3D G3DSA:3.40.50.300 216 434 6.1E-51 T 14-10-2018 C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 SMART SM00490 260 341 1.2E-33 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 Pfam PF00270 DEAD/DEAH box helicase 31 195 6.2E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 Gene3D G3DSA:3.30.70.330 483 555 1.0E-11 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 Pfam PF03880 DbpA RNA binding domain 483 553 1.1E-20 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 Pfam PF00271 Helicase conserved C-terminal domain 231 341 1.2E-29 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_06495 af965c723584f33eb248e35a8ff0cdab 602 SUPERFAMILY SSF52540 75 363 1.01E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05070 c5446a0d007529c1ecb8808fde4d7289 639 Pfam PF01266 FAD dependent oxidoreductase 250 605 9.4E-45 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 C3497_05070 c5446a0d007529c1ecb8808fde4d7289 639 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 113 233 2.0E-37 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 C3497_05070 c5446a0d007529c1ecb8808fde4d7289 639 Gene3D G3DSA:3.40.50.150 6 241 1.5E-89 T 14-10-2018 C3497_05070 c5446a0d007529c1ecb8808fde4d7289 639 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 4 630 25.144 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 C3497_05070 c5446a0d007529c1ecb8808fde4d7289 639 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 249 631 2.5E-120 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 C3497_05070 c5446a0d007529c1ecb8808fde4d7289 639 SUPERFAMILY SSF51905 249 630 2.98E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_05070 c5446a0d007529c1ecb8808fde4d7289 639 SUPERFAMILY SSF54373 463 550 1.44E-6 T 14-10-2018 C3497_05070 c5446a0d007529c1ecb8808fde4d7289 639 Gene3D G3DSA:3.50.50.60 247 630 2.1E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_05070 c5446a0d007529c1ecb8808fde4d7289 639 Gene3D G3DSA:3.30.9.10 333 551 2.1E-122 T 14-10-2018 C3497_01040 d477026c3ad916060eb9f07fc5ad3ef9 237 SUPERFAMILY SSF52540 4 218 1.38E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01040 d477026c3ad916060eb9f07fc5ad3ef9 237 Pfam PF00005 ABC transporter 19 156 1.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_01040 d477026c3ad916060eb9f07fc5ad3ef9 237 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_01040 d477026c3ad916060eb9f07fc5ad3ef9 237 Gene3D G3DSA:3.40.50.300 3 234 2.0E-62 T 14-10-2018 C3497_01040 d477026c3ad916060eb9f07fc5ad3ef9 237 SMART SM00382 28 212 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_06570 783bdbb1df2f3970cb6954f7e634565d 499 Pfam PF02541 Ppx/GppA phosphatase family 22 301 1.2E-74 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 C3497_06570 783bdbb1df2f3970cb6954f7e634565d 499 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 6 300 1.2E-100 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 C3497_06570 783bdbb1df2f3970cb6954f7e634565d 499 PIRSF PIRSF001267 1 493 4.0E-197 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 C3497_06570 783bdbb1df2f3970cb6954f7e634565d 499 SUPERFAMILY SSF53067 131 305 6.22E-44 T 14-10-2018 C3497_06570 783bdbb1df2f3970cb6954f7e634565d 499 Gene3D G3DSA:3.30.420.150 110 289 1.2E-85 T 14-10-2018 C3497_06570 783bdbb1df2f3970cb6954f7e634565d 499 SUPERFAMILY SSF53067 6 127 9.07E-35 T 14-10-2018 C3497_06570 783bdbb1df2f3970cb6954f7e634565d 499 SUPERFAMILY SSF109604 307 491 1.05E-46 T 14-10-2018 C3497_06570 783bdbb1df2f3970cb6954f7e634565d 499 Gene3D G3DSA:1.10.3210.10 304 496 5.2E-59 T 14-10-2018 C3497_06570 783bdbb1df2f3970cb6954f7e634565d 499 Gene3D G3DSA:3.30.420.40 7 297 1.2E-85 T 14-10-2018 C3497_00230 171f194a4c9387309f2fa150aa795cf1 266 Gene3D G3DSA:1.10.12.10 209 266 2.4E-20 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal C3497_00230 171f194a4c9387309f2fa150aa795cf1 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 265 1.5E-56 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3497_00230 171f194a4c9387309f2fa150aa795cf1 266 Gene3D G3DSA:3.90.226.10 1 206 7.7E-63 T 14-10-2018 C3497_00230 171f194a4c9387309f2fa150aa795cf1 266 SUPERFAMILY SSF52096 2 264 2.66E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_10175 d955f9279e7447f4d96fa7304e0a9fae 740 Gene3D G3DSA:3.40.50.300 284 635 1.3E-119 T 14-10-2018 C3497_10175 d955f9279e7447f4d96fa7304e0a9fae 740 SUPERFAMILY SSF52540 1 642 4.21E-178 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10175 d955f9279e7447f4d96fa7304e0a9fae 740 Gene3D G3DSA:3.40.50.300 8 276 6.1E-91 T 14-10-2018 C3497_10175 d955f9279e7447f4d96fa7304e0a9fae 740 Gene3D G3DSA:1.10.486.10 386 548 1.3E-119 T 14-10-2018 C3497_10175 d955f9279e7447f4d96fa7304e0a9fae 740 Gene3D G3DSA:1.10.10.160 112 184 6.1E-91 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily C3497_10175 d955f9279e7447f4d96fa7304e0a9fae 740 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 276 2.2E-72 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C3497_10175 d955f9279e7447f4d96fa7304e0a9fae 740 Pfam PF13361 UvrD-like helicase C-terminal domain 281 618 1.2E-71 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C3497_05210 192103cd77f02dd2e5c5739c85913b34 206 SUPERFAMILY SSF51206 28 97 2.53E-5 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C3497_05210 192103cd77f02dd2e5c5739c85913b34 206 SUPERFAMILY SSF46785 134 193 3.63E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_05210 192103cd77f02dd2e5c5739c85913b34 206 SMART SM00419 153 203 1.4E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_05210 192103cd77f02dd2e5c5739c85913b34 206 Gene3D G3DSA:2.60.120.1460 22 203 2.5E-8 T 14-10-2018 C3497_05210 192103cd77f02dd2e5c5739c85913b34 206 Pfam PF13545 Crp-like helix-turn-helix domain 158 201 6.3E-7 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_12870 5c8e82c81267637de69c9c63bd12813d 118 SUPERFAMILY SSF54523 8 97 3.24E-19 T 14-10-2018 C3497_12870 5c8e82c81267637de69c9c63bd12813d 118 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12870 5c8e82c81267637de69c9c63bd12813d 118 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 9.0E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12870 5c8e82c81267637de69c9c63bd12813d 118 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 28 8.8E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12870 5c8e82c81267637de69c9c63bd12813d 118 Gene3D G3DSA:3.30.700.10 8 116 2.9E-24 T 14-10-2018 C3497_08185 26f9d545a1e0bc25702b04a539d22355 375 Pfam PF09623 CRISPR-associated protein NE0113 (Cas_NE0113) 21 235 3.2E-60 T 14-10-2018 IPR019092 CRISPR-assoc protein, NE0113/Csx13 C3497_08185 26f9d545a1e0bc25702b04a539d22355 375 TIGRFAM TIGR02584 cas_NE0113: CRISPR-associated protein, NE0113 family 13 214 3.6E-72 T 14-10-2018 IPR013413 CRISPR-associated protein, NE0113 C3497_09920 b51e72765f9cbb0fcde1555d1cd73f91 176 Gene3D G3DSA:3.90.80.10 1 175 1.6E-68 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C3497_09920 b51e72765f9cbb0fcde1555d1cd73f91 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.058 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C3497_09920 b51e72765f9cbb0fcde1555d1cd73f91 176 SUPERFAMILY SSF50324 3 171 1.7E-66 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C3497_09920 b51e72765f9cbb0fcde1555d1cd73f91 176 Pfam PF00719 Inorganic pyrophosphatase 18 170 1.6E-51 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C3497_09920 b51e72765f9cbb0fcde1555d1cd73f91 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C3497_00700 51ea2b16ebdfbc79b30ba3282f851b59 598 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 53 78 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 C3497_00700 51ea2b16ebdfbc79b30ba3282f851b59 598 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 574 583 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 C3497_00700 51ea2b16ebdfbc79b30ba3282f851b59 598 Pfam PF00374 Nickel-dependent hydrogenase 53 583 2.9E-231 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C3497_00700 51ea2b16ebdfbc79b30ba3282f851b59 598 SUPERFAMILY SSF56762 10 583 1.05E-181 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_00700 51ea2b16ebdfbc79b30ba3282f851b59 598 Gene3D G3DSA:1.10.645.10 2 583 1.1E-267 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_09040 7bdaeb3bbe65198b4388773535612df4 564 Gene3D G3DSA:1.10.3720.10 18 279 4.5E-50 T 14-10-2018 IPR035906 MetI-like superfamily C3497_09040 7bdaeb3bbe65198b4388773535612df4 564 Gene3D G3DSA:1.10.3720.10 298 550 3.3E-31 T 14-10-2018 IPR035906 MetI-like superfamily C3497_09040 7bdaeb3bbe65198b4388773535612df4 564 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 385 548 7.2E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_09040 7bdaeb3bbe65198b4388773535612df4 564 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 274 1.3E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_09040 7bdaeb3bbe65198b4388773535612df4 564 SUPERFAMILY SSF161098 302 542 1.13E-32 T 14-10-2018 IPR035906 MetI-like superfamily C3497_09040 7bdaeb3bbe65198b4388773535612df4 564 SUPERFAMILY SSF161098 22 267 3.27E-46 T 14-10-2018 IPR035906 MetI-like superfamily C3497_09040 7bdaeb3bbe65198b4388773535612df4 564 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 21 561 7.1E-224 T 14-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 Gene3D G3DSA:3.40.50.80 111 247 3.1E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 Gene3D G3DSA:3.10.20.30 248 355 3.6E-26 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 SUPERFAMILY SSF52343 95 243 5.89E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 SUPERFAMILY SSF63380 2 104 2.08E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 5 353 5.4E-167 T 14-10-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 271 343 8.3E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 Pfam PF00970 Oxidoreductase FAD-binding domain 8 105 5.2E-13 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 Pfam PF00175 Oxidoreductase NAD-binding domain 120 227 1.0E-14 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 Gene3D G3DSA:2.40.30.10 3 105 2.2E-23 T 14-10-2018 C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 142 151 2.0E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 221 2.0E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 37 49 2.0E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 117 136 2.0E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3497_00830 744d5451e2ae76f562d391c9f43621ee 355 SUPERFAMILY SSF54292 235 351 5.25E-28 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3497_07350 bf089e797c52191170e53c2b0892a6ca 275 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 231 257 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 C3497_07350 bf089e797c52191170e53c2b0892a6ca 275 Pfam PF01148 Cytidylyltransferase family 3 269 1.8E-54 T 14-10-2018 C3497_02340 44d9d98c54d6da3588a22a5c6f7d7fb7 150 SUPERFAMILY SSF52821 20 149 5.37E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_02340 44d9d98c54d6da3588a22a5c6f7d7fb7 150 Pfam PF00581 Rhodanese-like domain 37 125 6.2E-11 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_02340 44d9d98c54d6da3588a22a5c6f7d7fb7 150 SMART SM00450 26 133 4.2E-11 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_02340 44d9d98c54d6da3588a22a5c6f7d7fb7 150 Gene3D G3DSA:3.40.250.10 20 150 2.4E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_01160 ab384762f70351644152aacdcf4c5c20 220 Pfam PF00072 Response regulator receiver domain 3 113 5.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01160 ab384762f70351644152aacdcf4c5c20 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.1E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_01160 ab384762f70351644152aacdcf4c5c20 220 SMART SM00448 1 112 2.4E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01160 ab384762f70351644152aacdcf4c5c20 220 Gene3D G3DSA:1.10.10.10 123 220 2.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_01160 ab384762f70351644152aacdcf4c5c20 220 Gene3D G3DSA:3.40.50.2300 1 122 1.7E-39 T 14-10-2018 C3497_01160 ab384762f70351644152aacdcf4c5c20 220 SMART SM00862 145 216 1.4E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_01160 ab384762f70351644152aacdcf4c5c20 220 SUPERFAMILY SSF52172 1 179 1.76E-38 T 14-10-2018 IPR011006 CheY-like superfamily C3497_07000 584eacb96e6e4278222f2153ac630960 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 84.925 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 C3497_07000 584eacb96e6e4278222f2153ac630960 486 SUPERFAMILY SSF54631 91 203 1.39E-29 T 14-10-2018 C3497_07000 584eacb96e6e4278222f2153ac630960 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 454 4.3E-192 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 C3497_07000 584eacb96e6e4278222f2153ac630960 486 Gene3D G3DSA:3.20.20.70 1 485 1.5E-214 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_07000 584eacb96e6e4278222f2153ac630960 486 PIRSF PIRSF000130 1 486 9.1E-205 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 C3497_07000 584eacb96e6e4278222f2153ac630960 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 C3497_07000 584eacb96e6e4278222f2153ac630960 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 6.5E-162 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 C3497_07000 584eacb96e6e4278222f2153ac630960 486 SMART SM00116 95 142 4.3E-10 T 14-10-2018 IPR000644 CBS domain C3497_07000 584eacb96e6e4278222f2153ac630960 486 SMART SM00116 156 204 1.9E-6 T 14-10-2018 IPR000644 CBS domain C3497_07000 584eacb96e6e4278222f2153ac630960 486 Pfam PF00571 CBS domain 94 138 3.9E-10 T 14-10-2018 IPR000644 CBS domain C3497_07000 584eacb96e6e4278222f2153ac630960 486 Pfam PF00571 CBS domain 147 202 3.5E-9 T 14-10-2018 IPR000644 CBS domain C3497_07000 584eacb96e6e4278222f2153ac630960 486 SUPERFAMILY SSF51412 2 476 7.59E-123 T 14-10-2018 C3497_07000 584eacb96e6e4278222f2153ac630960 486 SMART SM01240 6 472 0.0 T 14-10-2018 C3497_10250 f1f156ee3a44669b9c8a352a5606566c 249 SUPERFAMILY SSF53218 3 198 1.7E-30 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C3497_10250 f1f156ee3a44669b9c8a352a5606566c 249 Pfam PF00994 Probable molybdopterin binding domain 5 157 2.9E-24 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_10250 f1f156ee3a44669b9c8a352a5606566c 249 SMART SM00852 4 164 2.8E-28 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_10250 f1f156ee3a44669b9c8a352a5606566c 249 Gene3D G3DSA:3.40.980.10 2 161 6.6E-37 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C3497_00440 914e490bded2f91e3744ad25fcec6dca 386 Pfam PF13458 Periplasmic binding protein 30 376 3.0E-74 T 14-10-2018 IPR028081 Leucine-binding protein domain C3497_00440 914e490bded2f91e3744ad25fcec6dca 386 Gene3D G3DSA:3.40.50.2300 150 279 5.9E-82 T 14-10-2018 C3497_00440 914e490bded2f91e3744ad25fcec6dca 386 SUPERFAMILY SSF53822 30 381 1.81E-84 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_00440 914e490bded2f91e3744ad25fcec6dca 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 260 278 2.5E-9 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_00440 914e490bded2f91e3744ad25fcec6dca 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 72 90 2.5E-9 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_00440 914e490bded2f91e3744ad25fcec6dca 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 2.5E-9 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_00440 914e490bded2f91e3744ad25fcec6dca 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 2.5E-9 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_00440 914e490bded2f91e3744ad25fcec6dca 386 Gene3D G3DSA:3.40.50.2300 39 344 5.9E-82 T 14-10-2018 C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 SUPERFAMILY SSF55021 331 405 1.02E-26 T 14-10-2018 C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 Pfam PF00696 Amino acid kinase family 3 229 3.9E-51 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 Gene3D G3DSA:3.30.70.260 266 335 2.3E-30 T 14-10-2018 C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 SUPERFAMILY SSF53633 4 242 9.82E-77 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 Gene3D G3DSA:3.30.70.260 336 407 1.1E-27 T 14-10-2018 C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 403 2.3E-136 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 Pfam PF13840 ACT domain 337 400 2.3E-17 T 14-10-2018 IPR027795 CASTOR, ACT domain C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 SUPERFAMILY SSF55021 249 327 3.71E-20 T 14-10-2018 C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 Gene3D G3DSA:3.40.1160.10 1 265 1.2E-92 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 Pfam PF01842 ACT domain 268 326 6.3E-11 T 14-10-2018 IPR002912 ACT domain C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 403 1.3E-121 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 PIRSF PIRSF000726 53 407 1.2E-151 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3497_08605 4539633a2662adb96b36ddd1c0d6bdcd 407 PIRSF PIRSF000726 1 60 8.0E-23 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3497_00045 324369b87ad02cdf168651422c68a14b 224 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 7 224 40.046 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 C3497_00045 324369b87ad02cdf168651422c68a14b 224 TIGRFAM TIGR02796 tolQ: protein TolQ 8 221 4.5E-86 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 C3497_00045 324369b87ad02cdf168651422c68a14b 224 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 209 6.9E-41 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C3497_03230 b6108e94816d03d2a054ea695887eb9f 501 SMART SM01118 2 201 1.2E-39 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 C3497_03230 b6108e94816d03d2a054ea695887eb9f 501 SMART SM00880 226 488 6.4E-66 T 14-10-2018 IPR007899 CHAD domain C3497_03230 b6108e94816d03d2a054ea695887eb9f 501 Gene3D G3DSA:2.40.320.10 1 197 1.1E-28 T 14-10-2018 C3497_03230 b6108e94816d03d2a054ea695887eb9f 501 Pfam PF05235 CHAD domain 229 453 2.9E-48 T 14-10-2018 IPR007899 CHAD domain C3497_03230 b6108e94816d03d2a054ea695887eb9f 501 Gene3D G3DSA:1.40.20.10 208 488 2.6E-60 T 14-10-2018 IPR038186 CHAD domain superfamily C3497_03230 b6108e94816d03d2a054ea695887eb9f 501 SUPERFAMILY SSF55154 1 210 3.27E-42 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 C3497_03230 b6108e94816d03d2a054ea695887eb9f 501 Pfam PF01928 CYTH domain 3 195 1.6E-27 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 C3497_07605 8502ca85e048aa57419165198e620a7c 488 Gene3D G3DSA:3.30.300.160 2 83 1.5E-5 T 14-10-2018 C3497_07605 8502ca85e048aa57419165198e620a7c 488 SUPERFAMILY SSF160246 6 69 4.58E-14 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C3497_07605 8502ca85e048aa57419165198e620a7c 488 SMART SM00382 244 365 5.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_07605 8502ca85e048aa57419165198e620a7c 488 SUPERFAMILY SSF52540 93 486 1.93E-97 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07605 8502ca85e048aa57419165198e620a7c 488 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 311 325 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_07605 8502ca85e048aa57419165198e620a7c 488 Pfam PF00437 Type II/IV secretion system protein 119 382 3.4E-85 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_07605 8502ca85e048aa57419165198e620a7c 488 Gene3D G3DSA:3.40.50.300 220 488 1.5E-106 T 14-10-2018 C3497_07605 8502ca85e048aa57419165198e620a7c 488 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 6 486 3.5E-209 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 C3497_07605 8502ca85e048aa57419165198e620a7c 488 Gene3D G3DSA:3.30.450.90 84 216 2.4E-50 T 14-10-2018 C3497_07275 e715c71866fb04c4d41c51dc371166d6 155 Gene3D G3DSA:1.20.120.520 4 155 8.1E-25 T 14-10-2018 C3497_07275 e715c71866fb04c4d41c51dc371166d6 155 Pfam PF01814 Hemerythrin HHE cation binding domain 5 126 6.1E-20 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C3497_07525 da3716f28e1f6d2f33c746f044785196 288 Gene3D G3DSA:3.10.290.10 24 81 1.5E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3497_07525 da3716f28e1f6d2f33c746f044785196 288 Pfam PF00849 RNA pseudouridylate synthase 91 224 5.5E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_07525 da3716f28e1f6d2f33c746f044785196 288 SUPERFAMILY SSF55120 89 257 2.88E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_07525 da3716f28e1f6d2f33c746f044785196 288 Pfam PF01479 S4 domain 28 73 1.7E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_07525 da3716f28e1f6d2f33c746f044785196 288 SUPERFAMILY SSF55174 29 115 8.39E-18 T 14-10-2018 C3497_07525 da3716f28e1f6d2f33c746f044785196 288 Gene3D G3DSA:3.30.70.1560 153 243 4.6E-52 T 14-10-2018 C3497_07525 da3716f28e1f6d2f33c746f044785196 288 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 129 143 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3497_07525 da3716f28e1f6d2f33c746f044785196 288 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 95 255 5.6E-54 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3497_07525 da3716f28e1f6d2f33c746f044785196 288 Gene3D G3DSA:3.30.70.580 93 251 4.6E-52 T 14-10-2018 C3497_07525 da3716f28e1f6d2f33c746f044785196 288 SMART SM00363 28 90 1.1E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_05555 dd451e804d71d45b54588a7c18fdeb4a 125 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 124 2.6E-21 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 C3497_05555 dd451e804d71d45b54588a7c18fdeb4a 125 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 119 8.9E-20 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 C3497_05555 dd451e804d71d45b54588a7c18fdeb4a 125 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 22 123 3.0E-20 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 C3497_05555 dd451e804d71d45b54588a7c18fdeb4a 125 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 124 21.842 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 C3497_05555 dd451e804d71d45b54588a7c18fdeb4a 125 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 124 1.7E-27 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 C3497_05555 dd451e804d71d45b54588a7c18fdeb4a 125 Gene3D G3DSA:3.90.470.20 1 124 6.9E-32 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 C3497_05555 dd451e804d71d45b54588a7c18fdeb4a 125 SUPERFAMILY SSF56214 1 123 2.35E-25 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 C3497_08355 01df37f5ea48a395e85e81e0641a6946 335 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 1 331 24.003 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 C3497_08355 01df37f5ea48a395e85e81e0641a6946 335 Pfam PF03116 NQR2, RnfD, RnfE family 3 329 7.4E-96 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 C3497_08355 01df37f5ea48a395e85e81e0641a6946 335 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 4 330 1.9E-112 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 C3497_10105 e765e7a94b7511b2793d0ef564b6786d 592 SMART SM00965 98 146 0.0021 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 C3497_10105 e765e7a94b7511b2793d0ef564b6786d 592 Pfam PF00263 Bacterial type II and III secretion system protein 387 564 5.3E-45 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 C3497_10105 e765e7a94b7511b2793d0ef564b6786d 592 Gene3D G3DSA:3.55.50.30 66 152 1.7E-10 T 14-10-2018 C3497_10105 e765e7a94b7511b2793d0ef564b6786d 592 Pfam PF07655 Secretin N-terminal domain 151 222 1.2E-13 T 14-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 C3497_10105 e765e7a94b7511b2793d0ef564b6786d 592 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 257 563 5.1E-86 T 14-10-2018 IPR013358 Pilus biogenesis, MshL C3497_10105 e765e7a94b7511b2793d0ef564b6786d 592 PRINTS PR00811 Bacterial general secretion pathway protein D signature 382 406 4.5E-19 T 14-10-2018 IPR001775 GspD/PilQ family C3497_10105 e765e7a94b7511b2793d0ef564b6786d 592 PRINTS PR00811 Bacterial general secretion pathway protein D signature 551 565 4.5E-19 T 14-10-2018 IPR001775 GspD/PilQ family C3497_10105 e765e7a94b7511b2793d0ef564b6786d 592 PRINTS PR00811 Bacterial general secretion pathway protein D signature 291 301 4.5E-19 T 14-10-2018 IPR001775 GspD/PilQ family C3497_10105 e765e7a94b7511b2793d0ef564b6786d 592 PRINTS PR00811 Bacterial general secretion pathway protein D signature 528 546 4.5E-19 T 14-10-2018 IPR001775 GspD/PilQ family C3497_03295 55e00465a463eb522972249c652fc8e7 757 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 650 1.1E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_03295 55e00465a463eb522972249c652fc8e7 757 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 1.2E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3497_03295 55e00465a463eb522972249c652fc8e7 757 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 C3497_03295 55e00465a463eb522972249c652fc8e7 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 3.4E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_03295 55e00465a463eb522972249c652fc8e7 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 3.4E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_03295 55e00465a463eb522972249c652fc8e7 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 3.4E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_03295 55e00465a463eb522972249c652fc8e7 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 3.4E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3497_03295 55e00465a463eb522972249c652fc8e7 757 SMART SM01086 657 747 8.1E-32 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3497_03295 55e00465a463eb522972249c652fc8e7 757 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 347 4.9E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_03295 55e00465a463eb522972249c652fc8e7 757 Gene3D G3DSA:1.10.1780.10 1 142 2.1E-43 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C3497_03295 55e00465a463eb522972249c652fc8e7 757 SUPERFAMILY SSF81923 1 141 5.62E-61 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C3497_03295 55e00465a463eb522972249c652fc8e7 757 SMART SM00382 491 640 6.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_03295 55e00465a463eb522972249c652fc8e7 757 SMART SM00382 210 355 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_03295 55e00465a463eb522972249c652fc8e7 757 Gene3D G3DSA:1.10.8.60 657 756 1.8E-27 T 14-10-2018 C3497_03295 55e00465a463eb522972249c652fc8e7 757 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 C3497_03295 55e00465a463eb522972249c652fc8e7 757 SUPERFAMILY SSF52540 441 739 5.95E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_03295 55e00465a463eb522972249c652fc8e7 757 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 C3497_03295 55e00465a463eb522972249c652fc8e7 757 Gene3D G3DSA:3.40.50.300 443 655 1.6E-78 T 14-10-2018 C3497_03295 55e00465a463eb522972249c652fc8e7 757 SUPERFAMILY SSF52540 172 425 2.5E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_03295 55e00465a463eb522972249c652fc8e7 757 Gene3D G3DSA:3.40.50.300 159 354 4.9E-68 T 14-10-2018 C3497_03295 55e00465a463eb522972249c652fc8e7 757 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.4E-16 T 14-10-2018 IPR004176 Clp, N-terminal C3497_03295 55e00465a463eb522972249c652fc8e7 757 Gene3D G3DSA:1.10.8.60 355 442 1.0E-32 T 14-10-2018 C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 Gene3D G3DSA:1.20.120.430 126 452 2.7E-99 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 Pfam PF01926 50S ribosome-binding GTPase 222 319 1.1E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 342 5.4E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 452 33.296 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 Gene3D G3DSA:3.40.50.300 221 383 2.7E-99 T 14-10-2018 C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 SUPERFAMILY SSF52540 77 373 9.03E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 124 3.1E-39 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 SUPERFAMILY SSF116878 125 452 8.76E-48 T 14-10-2018 C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 452 8.1E-105 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 Pfam PF12631 MnmE helical domain 127 449 4.0E-55 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 C3497_14395 7072ca2749fd7f6257ccf8b28aacd445 452 Gene3D G3DSA:3.30.1360.120 2 125 4.6E-45 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 C3497_02145 dc888acb4ba34cfe290a0ed55e171a28 346 Gene3D G3DSA:3.40.50.300 101 346 1.4E-105 T 14-10-2018 C3497_02145 dc888acb4ba34cfe290a0ed55e171a28 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 8.5E-158 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 C3497_02145 dc888acb4ba34cfe290a0ed55e171a28 346 SUPERFAMILY SSF52540 5 335 9.29E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02145 dc888acb4ba34cfe290a0ed55e171a28 346 Gene3D G3DSA:3.30.450.90 1 100 6.3E-38 T 14-10-2018 C3497_02145 dc888acb4ba34cfe290a0ed55e171a28 346 SMART SM00382 122 256 0.0013 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_02145 dc888acb4ba34cfe290a0ed55e171a28 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_02145 dc888acb4ba34cfe290a0ed55e171a28 346 Pfam PF00437 Type II/IV secretion system protein 12 267 2.3E-47 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 SUPERFAMILY SSF53756 669 1013 8.85E-51 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 Gene3D G3DSA:3.40.50.2000 674 1002 3.1E-38 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 SUPERFAMILY SSF53756 1047 1357 2.88E-36 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 Pfam PF13692 Glycosyl transferases group 1 189 290 2.3E-6 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 Pfam PF13692 Glycosyl transferases group 1 1185 1326 4.8E-19 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 Pfam PF13692 Glycosyl transferases group 1 845 979 6.5E-21 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 SUPERFAMILY SSF90257 424 517 9.68E-7 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 Gene3D G3DSA:3.40.50.2000 1 182 3.3E-22 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 SUPERFAMILY SSF53756 4 294 6.6E-34 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 Gene3D G3DSA:3.40.50.2000 186 350 1.9E-7 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 Gene3D G3DSA:3.40.50.2000 1175 1338 3.0E-24 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 Gene3D G3DSA:3.40.50.2000 827 998 3.1E-38 T 14-10-2018 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 Pfam PF13439 Glycosyltransferase Family 4 13 171 1.2E-19 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_09640 776bb0c9ceb32a379ffb1b6eae4488ab 1359 Gene3D G3DSA:1.20.5.340 411 513 9.3E-9 T 14-10-2018 C3497_00490 e2f995cd2627ab270bcdf9e910da2f2d 262 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C3497_00490 e2f995cd2627ab270bcdf9e910da2f2d 262 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 256 1.7E-77 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C3497_00490 e2f995cd2627ab270bcdf9e910da2f2d 262 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 262 19.261 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C3497_00490 e2f995cd2627ab270bcdf9e910da2f2d 262 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 256 7.7E-77 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C3497_06090 07fb5715eb196c0fb5b9024224127604 333 Pfam PF02618 YceG-like family 39 324 6.9E-82 T 14-10-2018 IPR003770 Endolytic murein transglycosylase C3497_06090 07fb5715eb196c0fb5b9024224127604 333 Gene3D G3DSA:1.10.8.1150 35 109 3.2E-6 T 14-10-2018 C3497_06090 07fb5715eb196c0fb5b9024224127604 333 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 2 327 3.7E-84 T 14-10-2018 IPR003770 Endolytic murein transglycosylase C3497_06090 07fb5715eb196c0fb5b9024224127604 333 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 4 328 34.145 T 14-10-2018 IPR003770 Endolytic murein transglycosylase C3497_06090 07fb5715eb196c0fb5b9024224127604 333 Gene3D G3DSA:3.30.160.60 298 332 1.3E-9 T 14-10-2018 C3497_07095 28525815e6cd0d13e3caa574191a414e 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 2.5E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_07095 28525815e6cd0d13e3caa574191a414e 242 Pfam PF07702 UTRA domain 100 233 1.5E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 C3497_07095 28525815e6cd0d13e3caa574191a414e 242 SMART SM00345 15 74 1.3E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_07095 28525815e6cd0d13e3caa574191a414e 242 Gene3D G3DSA:3.40.1410.10 83 241 2.5E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C3497_07095 28525815e6cd0d13e3caa574191a414e 242 Gene3D G3DSA:1.10.10.10 7 75 1.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_07095 28525815e6cd0d13e3caa574191a414e 242 SUPERFAMILY SSF64288 63 241 2.51E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C3497_07095 28525815e6cd0d13e3caa574191a414e 242 SUPERFAMILY SSF46785 9 87 2.32E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_07095 28525815e6cd0d13e3caa574191a414e 242 SMART SM00866 94 236 2.8E-28 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 C3497_07095 28525815e6cd0d13e3caa574191a414e 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_07095 28525815e6cd0d13e3caa574191a414e 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 SUPERFAMILY SSF81301 492 764 5.89E-76 T 14-10-2018 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 Gene3D G3DSA:1.20.120.1510 417 528 6.0E-22 T 14-10-2018 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 SUPERFAMILY SSF81593 260 410 9.42E-47 T 14-10-2018 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 Gene3D G3DSA:3.30.460.100 19 253 2.6E-65 T 14-10-2018 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 Gene3D G3DSA:3.30.460.100 529 760 2.0E-74 T 14-10-2018 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 7 893 19.151 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 SUPERFAMILY SSF81593 764 891 1.26E-31 T 14-10-2018 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 Gene3D G3DSA:1.20.120.330 258 413 5.4E-59 T 14-10-2018 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 Gene3D G3DSA:1.20.120.330 761 894 2.1E-38 T 14-10-2018 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 Pfam PF08335 GlnD PII-uridylyltransferase 270 409 6.5E-49 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 Pfam PF08335 GlnD PII-uridylyltransferase 776 867 4.8E-8 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 520 754 4.8E-67 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 13 245 1.2E-62 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 C3497_03235 9f8526bda151fb8fcddbaa0e908c2663 894 SUPERFAMILY SSF81301 13 259 8.17E-71 T 14-10-2018 C3497_02500 33ef282a45363db275881b800ec6b376 540 Gene3D G3DSA:3.40.50.150 205 496 2.1E-86 T 14-10-2018 C3497_02500 33ef282a45363db275881b800ec6b376 540 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 6 513 3.0E-115 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 C3497_02500 33ef282a45363db275881b800ec6b376 540 Pfam PF12161 HsdM N-terminal domain 9 173 7.7E-31 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain C3497_02500 33ef282a45363db275881b800ec6b376 540 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 323 329 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3497_02500 33ef282a45363db275881b800ec6b376 540 Pfam PF02384 N-6 DNA Methylase 183 502 9.0E-102 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 C3497_02500 33ef282a45363db275881b800ec6b376 540 SUPERFAMILY SSF53335 7 536 1.01E-131 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_02500 33ef282a45363db275881b800ec6b376 540 Gene3D G3DSA:1.20.1260.30 1 200 1.6E-49 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily C3497_02500 33ef282a45363db275881b800ec6b376 540 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 241 255 3.1E-19 T 14-10-2018 C3497_02500 33ef282a45363db275881b800ec6b376 540 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 355 379 3.1E-19 T 14-10-2018 C3497_02500 33ef282a45363db275881b800ec6b376 540 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 320 332 3.1E-19 T 14-10-2018 C3497_02500 33ef282a45363db275881b800ec6b376 540 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 207 223 3.1E-19 T 14-10-2018 C3497_03540 cdab733303247c79cad6202d4cea7492 203 Pfam PF01926 50S ribosome-binding GTPase 26 144 4.0E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_03540 cdab733303247c79cad6202d4cea7492 203 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 191 4.1E-69 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 C3497_03540 cdab733303247c79cad6202d4cea7492 203 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 195 26.055 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 C3497_03540 cdab733303247c79cad6202d4cea7492 203 Gene3D G3DSA:3.40.50.300 3 196 6.3E-50 T 14-10-2018 C3497_03540 cdab733303247c79cad6202d4cea7492 203 SUPERFAMILY SSF52540 21 195 1.06E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 Gene3D G3DSA:3.30.420.40 159 322 7.5E-131 T 14-10-2018 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 Pfam PF06723 MreB/Mbl protein 10 340 3.5E-150 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 Gene3D G3DSA:3.90.640.10 191 264 7.5E-131 T 14-10-2018 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 1.3E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 1.3E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 1.3E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 1.3E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 1.3E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 Gene3D G3DSA:3.30.420.40 13 332 7.5E-131 T 14-10-2018 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 1.9E-158 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 SUPERFAMILY SSF53067 9 153 5.6E-39 T 14-10-2018 C3497_14680 8ebfccebef5e3057e6120048a7ca0b9b 347 SUPERFAMILY SSF53067 154 337 3.71E-49 T 14-10-2018 C3497_02950 62c0aed35e02378cb0323470041dd3ca 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 97.962 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 C3497_02950 62c0aed35e02378cb0323470041dd3ca 198 TIGRFAM TIGR00615 recR: recombination protein RecR 3 196 9.2E-68 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 C3497_02950 62c0aed35e02378cb0323470041dd3ca 198 Gene3D G3DSA:1.10.8.420 1 52 1.2E-17 T 14-10-2018 C3497_02950 62c0aed35e02378cb0323470041dd3ca 198 Gene3D G3DSA:3.40.1360.10 77 198 1.2E-40 T 14-10-2018 C3497_02950 62c0aed35e02378cb0323470041dd3ca 198 SMART SM00493 80 165 5.7E-8 T 14-10-2018 IPR006171 TOPRIM domain C3497_02950 62c0aed35e02378cb0323470041dd3ca 198 SUPERFAMILY SSF111304 3 198 1.31E-71 T 14-10-2018 IPR023627 Recombination protein RecR C3497_02950 62c0aed35e02378cb0323470041dd3ca 198 Pfam PF02132 RecR protein 40 78 1.0E-12 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger C3497_02950 62c0aed35e02378cb0323470041dd3ca 198 Pfam PF13662 Toprim domain 81 170 2.8E-22 T 14-10-2018 IPR006171 TOPRIM domain C3497_08900 bc3bb4f61ca084e09650f31155fffa81 459 Gene3D G3DSA:1.20.210.10 1 458 1.5E-128 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_08900 bc3bb4f61ca084e09650f31155fffa81 459 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 8 436 2.9E-83 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_08900 bc3bb4f61ca084e09650f31155fffa81 459 SUPERFAMILY SSF81442 3 449 5.89E-90 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_08900 bc3bb4f61ca084e09650f31155fffa81 459 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 196 252 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_02005 740289143e8cfc1e828f39c736c8212f 122 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 5 119 9.9E-54 T 14-10-2018 IPR018714 Protein of unknown function DUF2237 C3497_02005 740289143e8cfc1e828f39c736c8212f 122 Gene3D G3DSA:3.30.56.110 1 122 7.2E-54 T 14-10-2018 C3497_05005 6516f1bf277034d94ad27d3a0b78b050 640 PIRSF PIRSF000549 1 640 8.2E-294 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 C3497_05005 6516f1bf277034d94ad27d3a0b78b050 640 Pfam PF08298 PrkA AAA domain 19 376 3.3E-175 T 14-10-2018 IPR013153 PrkA AAA domain C3497_05005 6516f1bf277034d94ad27d3a0b78b050 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.5E-75 T 14-10-2018 IPR010650 PrkA C-terminal domain C3497_05005 6516f1bf277034d94ad27d3a0b78b050 640 SMART SM00763 19 376 1.2E-220 T 14-10-2018 IPR013153 PrkA AAA domain C3497_05005 6516f1bf277034d94ad27d3a0b78b050 640 SUPERFAMILY SSF52540 75 345 9.68E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06745 65dad267cb3134da13b6a7cf51a9ddb1 140 Gene3D G3DSA:3.40.630.30 1 140 1.7E-44 T 14-10-2018 C3497_06745 65dad267cb3134da13b6a7cf51a9ddb1 140 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 5 136 3.5E-36 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 C3497_06745 65dad267cb3134da13b6a7cf51a9ddb1 140 SUPERFAMILY SSF55729 2 140 1.56E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_06745 65dad267cb3134da13b6a7cf51a9ddb1 140 Pfam PF00583 Acetyltransferase (GNAT) family 27 114 4.8E-16 T 14-10-2018 IPR000182 GNAT domain C3497_06590 510b53835c9b13ebb053fdd774375dec 213 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 45 189 1.5E-8 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component C3497_06590 510b53835c9b13ebb053fdd774375dec 213 SUPERFAMILY SSF159594 36 195 5.49E-27 T 14-10-2018 C3497_06590 510b53835c9b13ebb053fdd774375dec 213 Gene3D G3DSA:3.40.50.10610 38 202 1.5E-17 T 14-10-2018 C3497_12170 d11b015625b95cd1fe30a30175ed9978 311 Pfam PF01795 MraW methylase family 5 307 5.1E-105 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C3497_12170 d11b015625b95cd1fe30a30175ed9978 311 SUPERFAMILY SSF53335 7 308 1.39E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_12170 d11b015625b95cd1fe30a30175ed9978 311 PIRSF PIRSF004486 1 309 1.4E-99 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C3497_12170 d11b015625b95cd1fe30a30175ed9978 311 Gene3D G3DSA:3.40.50.150 10 307 3.0E-103 T 14-10-2018 C3497_12170 d11b015625b95cd1fe30a30175ed9978 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 307 2.5E-109 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C3497_12170 d11b015625b95cd1fe30a30175ed9978 311 Gene3D G3DSA:1.10.150.170 111 213 3.0E-103 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 C3497_12170 d11b015625b95cd1fe30a30175ed9978 311 SUPERFAMILY SSF81799 113 212 9.42E-31 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 C3497_12170 d11b015625b95cd1fe30a30175ed9978 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 308 37.673 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C3497_03320 a24e6c33a1d16a99507e88f3f47b3d5a 225 SUPERFAMILY SSF47781 16 88 1.11E-9 T 14-10-2018 IPR010994 RuvA domain 2-like C3497_03320 a24e6c33a1d16a99507e88f3f47b3d5a 225 Pfam PF04002 RadC-like JAB domain 104 224 5.1E-42 T 14-10-2018 IPR025657 RadC-like JAB domain C3497_03320 a24e6c33a1d16a99507e88f3f47b3d5a 225 Gene3D G3DSA:3.40.140.10 101 225 5.0E-40 T 14-10-2018 C3497_03320 a24e6c33a1d16a99507e88f3f47b3d5a 225 SUPERFAMILY SSF102712 113 196 5.1E-7 T 14-10-2018 C3497_03320 a24e6c33a1d16a99507e88f3f47b3d5a 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 225 1.9E-69 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 C3497_03320 a24e6c33a1d16a99507e88f3f47b3d5a 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site C3497_03320 a24e6c33a1d16a99507e88f3f47b3d5a 225 Gene3D G3DSA:1.10.150.20 46 87 1.8E-5 T 14-10-2018 C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 SUPERFAMILY SSF51735 3 250 9.62E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 Gene3D G3DSA:3.40.50.720 1 255 2.6E-78 T 14-10-2018 C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 6.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 6.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 Pfam PF00106 short chain dehydrogenase 6 203 4.1E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10035 3b5c3d26718b48a05cf57449f07eea2f 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 196 1.7E-4 T 14-10-2018 C3497_10450 17b5648e2ad49abfa0c7a429e91619c4 519 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 186 280 3.1E-20 T 14-10-2018 IPR026392 Exosortase/Archaeosortase domain C3497_10450 17b5648e2ad49abfa0c7a429e91619c4 519 TIGRFAM TIGR02602 8TM_EpsH: exosortase 46 279 2.8E-77 T 14-10-2018 IPR013426 Exosortase, EpsH-like C3497_10450 17b5648e2ad49abfa0c7a429e91619c4 519 Pfam PF11984 Protein of unknown function (DUF3485) 309 509 3.0E-39 T 14-10-2018 IPR014263 Methanolan biosynthesis EpsI C3497_10450 17b5648e2ad49abfa0c7a429e91619c4 519 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 31 278 7.2E-61 T 14-10-2018 IPR019127 Exosortase C3497_10450 17b5648e2ad49abfa0c7a429e91619c4 519 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 337 511 1.9E-33 T 14-10-2018 IPR014263 Methanolan biosynthesis EpsI C3497_10450 17b5648e2ad49abfa0c7a429e91619c4 519 TIGRFAM TIGR03109 exosortase_1: exosortase A 20 281 2.3E-97 T 14-10-2018 IPR017540 Exosortase 1 C3497_09055 db528449f921698a3fe171d98326f0c1 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 9.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_09055 db528449f921698a3fe171d98326f0c1 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 9.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_09055 db528449f921698a3fe171d98326f0c1 233 Gene3D G3DSA:1.10.10.10 6 84 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_09055 db528449f921698a3fe171d98326f0c1 233 SUPERFAMILY SSF48008 90 222 1.46E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal C3497_09055 db528449f921698a3fe171d98326f0c1 233 SMART SM00345 25 83 7.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_09055 db528449f921698a3fe171d98326f0c1 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 83 2.3E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_09055 db528449f921698a3fe171d98326f0c1 233 Gene3D G3DSA:1.20.120.530 87 226 9.1E-31 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal C3497_09055 db528449f921698a3fe171d98326f0c1 233 SMART SM00895 93 217 4.8E-21 T 14-10-2018 IPR011711 GntR, C-terminal C3497_09055 db528449f921698a3fe171d98326f0c1 233 SUPERFAMILY SSF46785 16 87 1.21E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_09055 db528449f921698a3fe171d98326f0c1 233 Pfam PF07729 FCD domain 93 216 1.5E-28 T 14-10-2018 IPR011711 GntR, C-terminal C3497_05355 7ca7dcd81f9e9eb9b9bc3d32176a24f9 311 SUPERFAMILY SSF52540 12 232 8.54E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05355 7ca7dcd81f9e9eb9b9bc3d32176a24f9 311 Gene3D G3DSA:3.40.50.300 3 236 9.8E-65 T 14-10-2018 C3497_05355 7ca7dcd81f9e9eb9b9bc3d32176a24f9 311 Pfam PF00005 ABC transporter 30 169 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_05355 7ca7dcd81f9e9eb9b9bc3d32176a24f9 311 SMART SM00382 38 218 1.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_05355 7ca7dcd81f9e9eb9b9bc3d32176a24f9 311 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_07710 bc918359391fe2c95949c148247ef680 197 Gene3D G3DSA:3.40.190.10 7 191 2.3E-30 T 14-10-2018 C3497_07710 bc918359391fe2c95949c148247ef680 197 SUPERFAMILY SSF53850 9 195 5.88E-33 T 14-10-2018 C3497_07710 bc918359391fe2c95949c148247ef680 197 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 8 192 3.6E-26 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF C3497_07710 bc918359391fe2c95949c148247ef680 197 SMART SM00062 1 195 6.9E-7 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF C3497_07710 bc918359391fe2c95949c148247ef680 197 Gene3D G3DSA:3.40.190.10 54 152 2.3E-30 T 14-10-2018 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 Gene3D G3DSA:3.20.19.10 660 901 5.7E-98 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 Pfam PF00330 Aconitase family (aconitate hydratase) 70 568 8.2E-177 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 ProSitePatterns PS01244 Aconitase family signature 2. 499 512 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 Gene3D G3DSA:3.30.499.10 375 596 1.4E-93 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 26 901 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 SUPERFAMILY SSF52016 641 901 2.35E-78 T 14-10-2018 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 Pfam PF00694 Aconitase C-terminal domain 698 828 1.3E-39 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 PRINTS PR00415 Aconitase family signature 147 160 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 PRINTS PR00415 Aconitase family signature 437 448 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 PRINTS PR00415 Aconitase family signature 171 179 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 PRINTS PR00415 Aconitase family signature 218 233 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 PRINTS PR00415 Aconitase family signature 499 512 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 PRINTS PR00415 Aconitase family signature 294 307 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 PRINTS PR00415 Aconitase family signature 204 217 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 PRINTS PR00415 Aconitase family signature 280 293 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 PRINTS PR00415 Aconitase family signature 374 388 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 SUPERFAMILY SSF53732 13 633 1.83E-212 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 Gene3D G3DSA:1.10.1440.20 597 657 8.8E-13 T 14-10-2018 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 Gene3D G3DSA:3.30.499.20 11 374 2.5E-155 T 14-10-2018 C3497_06910 8c32e50178052788b62c6fca2cc4d021 902 ProSitePatterns PS00450 Aconitase family signature 1. 433 449 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C3497_12760 7488eef4f25f40a97ab69845b4c93e72 602 Pfam PF00593 TonB dependent receptor 182 599 5.4E-40 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_12760 7488eef4f25f40a97ab69845b4c93e72 602 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 150 5.1E-31 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_12760 7488eef4f25f40a97ab69845b4c93e72 602 Gene3D G3DSA:2.40.170.20 159 600 1.8E-110 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3497_12760 7488eef4f25f40a97ab69845b4c93e72 602 Gene3D G3DSA:2.170.130.10 30 155 2.9E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_12760 7488eef4f25f40a97ab69845b4c93e72 602 SUPERFAMILY SSF56935 31 599 2.56E-114 T 14-10-2018 C3497_03370 a66211a4bc4dea5224cf19749127eb1c 151 Gene3D G3DSA:3.40.50.620 1 149 4.6E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_03370 a66211a4bc4dea5224cf19749127eb1c 151 PRINTS PR01438 Universal stress protein signature 108 120 5.4E-20 T 14-10-2018 IPR006015 Universal stress protein A C3497_03370 a66211a4bc4dea5224cf19749127eb1c 151 PRINTS PR01438 Universal stress protein signature 2 20 5.4E-20 T 14-10-2018 IPR006015 Universal stress protein A C3497_03370 a66211a4bc4dea5224cf19749127eb1c 151 PRINTS PR01438 Universal stress protein signature 126 148 5.4E-20 T 14-10-2018 IPR006015 Universal stress protein A C3497_03370 a66211a4bc4dea5224cf19749127eb1c 151 PIRSF PIRSF006276 1 150 1.5E-21 T 14-10-2018 IPR006015 Universal stress protein A C3497_03370 a66211a4bc4dea5224cf19749127eb1c 151 Pfam PF00582 Universal stress protein family 1 148 4.9E-31 T 14-10-2018 IPR006016 UspA C3497_03370 a66211a4bc4dea5224cf19749127eb1c 151 SUPERFAMILY SSF52402 1 149 5.27E-35 T 14-10-2018 C3497_03495 c848a5f4dfeffc8587c4ddeee209f468 448 SUPERFAMILY SSF53633 13 298 1.23E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3497_03495 c848a5f4dfeffc8587c4ddeee209f468 448 Pfam PF00583 Acetyltransferase (GNAT) family 337 414 1.1E-12 T 14-10-2018 IPR000182 GNAT domain C3497_03495 c848a5f4dfeffc8587c4ddeee209f468 448 PIRSF PIRSF000423 8 448 1.0E-187 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 C3497_03495 c848a5f4dfeffc8587c4ddeee209f468 448 Pfam PF00696 Amino acid kinase family 35 274 1.0E-35 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C3497_03495 c848a5f4dfeffc8587c4ddeee209f468 448 SUPERFAMILY SSF55729 299 424 5.09E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_03495 c848a5f4dfeffc8587c4ddeee209f468 448 Gene3D G3DSA:3.40.630.30 303 448 4.2E-43 T 14-10-2018 C3497_03495 c848a5f4dfeffc8587c4ddeee209f468 448 Gene3D G3DSA:3.40.1160.10 16 299 7.1E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3497_03495 c848a5f4dfeffc8587c4ddeee209f468 448 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 448 197.449 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 C3497_03495 c848a5f4dfeffc8587c4ddeee209f468 448 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 18 448 3.4E-173 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 4 247 2.7E-86 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 Gene3D G3DSA:3.30.540.10 2 145 2.9E-41 T 14-10-2018 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 Gene3D G3DSA:3.40.190.80 149 250 5.7E-34 T 14-10-2018 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 SUPERFAMILY SSF56655 3 245 1.23E-72 T 14-10-2018 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 Pfam PF00459 Inositol monophosphatase family 10 238 4.4E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 4 250 40.164 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 174 195 1.1E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.1E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 1.1E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 1.1E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_01440 08431ab1260eaf746d4296c55ab9dcd7 252 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 209 223 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 C3497_04040 51337d66b2b174c8ce2000fd8980d2f4 385 SUPERFAMILY SSF103473 4 375 2.35E-46 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_04040 51337d66b2b174c8ce2000fd8980d2f4 385 Gene3D G3DSA:1.20.1250.20 2 184 3.7E-22 T 14-10-2018 C3497_04040 51337d66b2b174c8ce2000fd8980d2f4 385 Pfam PF12832 MFS_1 like family 4 357 2.2E-76 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain C3497_04040 51337d66b2b174c8ce2000fd8980d2f4 385 Gene3D G3DSA:1.20.1250.20 191 376 2.0E-42 T 14-10-2018 C3497_04040 51337d66b2b174c8ce2000fd8980d2f4 385 PIRSF PIRSF004925 1 383 1.7E-101 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter C3497_06870 1ec111f6f66d7f8ed3ed31c662382bf4 127 SUPERFAMILY SSF82649 1 124 3.4E-48 T 14-10-2018 C3497_06870 1ec111f6f66d7f8ed3ed31c662382bf4 127 Gene3D G3DSA:3.90.1010.10 1 127 2.8E-56 T 14-10-2018 C3497_06870 1ec111f6f66d7f8ed3ed31c662382bf4 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 124 5.0E-68 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 C3497_06870 1ec111f6f66d7f8ed3ed31c662382bf4 127 Pfam PF01592 NifU-like N terminal domain 2 125 1.4E-55 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 C3497_08320 ca6747f3681c5ed1a23edd965ee807d6 371 SUPERFAMILY SSF50331 275 352 2.13E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal C3497_08320 ca6747f3681c5ed1a23edd965ee807d6 371 Gene3D G3DSA:3.40.50.300 4 223 1.8E-61 T 14-10-2018 C3497_08320 ca6747f3681c5ed1a23edd965ee807d6 371 Pfam PF08402 TOBE domain 282 351 2.1E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 C3497_08320 ca6747f3681c5ed1a23edd965ee807d6 371 Pfam PF00005 ABC transporter 20 163 5.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_08320 ca6747f3681c5ed1a23edd965ee807d6 371 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_08320 ca6747f3681c5ed1a23edd965ee807d6 371 SUPERFAMILY SSF52540 4 239 1.16E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_08320 ca6747f3681c5ed1a23edd965ee807d6 371 SMART SM00382 28 213 2.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_08320 ca6747f3681c5ed1a23edd965ee807d6 371 Gene3D G3DSA:2.40.50.940 224 352 1.8E-9 T 14-10-2018 C3497_08320 ca6747f3681c5ed1a23edd965ee807d6 371 Gene3D G3DSA:2.40.50.140 289 343 1.8E-9 T 14-10-2018 C3497_05230 328806da6fcc702bd557df69d2f5efa0 361 Pfam PF01609 Transposase DDE domain 190 346 7.3E-16 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_05230 328806da6fcc702bd557df69d2f5efa0 361 Pfam PF05598 Transposase domain (DUF772) 53 127 1.2E-20 T 14-10-2018 IPR008490 Transposase InsH, N-terminal C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 SUPERFAMILY SSF101801 250 324 1.96E-14 T 14-10-2018 IPR036429 SpoA-like superfamily C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 Gene3D G3DSA:3.40.1550.10 45 232 4.5E-57 T 14-10-2018 IPR028976 CheC-like superfamily C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 8.5E-27 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 8.5E-27 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 8.5E-27 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 8.5E-27 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 SUPERFAMILY SSF103039 4 231 3.92E-19 T 14-10-2018 IPR028976 CheC-like superfamily C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 Pfam PF02154 Flagellar motor switch protein FliM 39 231 6.4E-71 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 Gene3D G3DSA:2.30.330.10 245 328 5.4E-7 T 14-10-2018 IPR036429 SpoA-like superfamily C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 320 3.3E-20 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 319 5.1E-107 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 C3497_09275 a4f477d5724c1d1bedae1cf4ce824bd3 337 PIRSF PIRSF002888 2 329 3.4E-96 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 C3497_09495 c7dcc13b5a5700a61f451dde66684117 65 Gene3D G3DSA:2.40.50.530 1 65 8.5E-23 T 14-10-2018 C3497_09495 c7dcc13b5a5700a61f451dde66684117 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.971 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C3497_09495 c7dcc13b5a5700a61f451dde66684117 65 Pfam PF01632 Ribosomal protein L35 2 62 1.4E-26 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_09495 c7dcc13b5a5700a61f451dde66684117 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 7.5E-28 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C3497_09495 c7dcc13b5a5700a61f451dde66684117 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 9.0E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C3497_09495 c7dcc13b5a5700a61f451dde66684117 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 9.0E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C3497_09495 c7dcc13b5a5700a61f451dde66684117 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 9.0E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C3497_09495 c7dcc13b5a5700a61f451dde66684117 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_09495 c7dcc13b5a5700a61f451dde66684117 65 SUPERFAMILY SSF143034 2 64 2.75E-25 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12770 5141938f51063ba6e2bb955775ce4dfd 345 SUPERFAMILY SSF52733 3 341 4.19E-117 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 C3497_12770 5141938f51063ba6e2bb955775ce4dfd 345 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 9 340 6.4E-136 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 C3497_12770 5141938f51063ba6e2bb955775ce4dfd 345 Gene3D G3DSA:1.10.1610.10 19 340 2.6E-127 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 C3497_12770 5141938f51063ba6e2bb955775ce4dfd 345 Pfam PF02277 Phosphoribosyltransferase 5 340 2.4E-131 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 C3497_12770 5141938f51063ba6e2bb955775ce4dfd 345 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 7 342 35.593 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 C3497_12770 5141938f51063ba6e2bb955775ce4dfd 345 Gene3D G3DSA:3.40.50.10210 51 323 2.6E-127 T 14-10-2018 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 Gene3D G3DSA:2.30.42.10 280 383 3.2E-21 T 14-10-2018 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 SUPERFAMILY SSF50156 238 371 2.37E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 SMART SM00228 280 370 5.9E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 SUPERFAMILY SSF50494 68 276 1.26E-61 T 14-10-2018 IPR009003 Peptidase S1, PA clan C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 Pfam PF13180 PDZ domain 280 379 1.1E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 4.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 PRINTS PR00834 HtrA/DegQ protease family signature 132 152 4.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 4.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 4.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 PRINTS PR00834 HtrA/DegQ protease family signature 111 123 4.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 PRINTS PR00834 HtrA/DegQ protease family signature 174 198 4.0E-48 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 Gene3D G3DSA:2.40.10.10 165 279 3.8E-43 T 14-10-2018 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 Pfam PF13365 Trypsin-like peptidase domain 102 241 1.1E-35 T 14-10-2018 C3497_10710 cca7c4d1260d00088b4cfeffd38db72d 383 Gene3D G3DSA:2.40.10.10 50 160 4.3E-35 T 14-10-2018 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 Gene3D G3DSA:1.10.340.30 21 132 5.4E-77 T 14-10-2018 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 PIRSF PIRSF001435 1 210 5.6E-52 T 14-10-2018 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.3E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.404 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 Gene3D G3DSA:1.10.1670.10 11 203 5.4E-77 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 TIGRFAM TIGR01083 nth: endonuclease III 7 194 9.4E-82 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.8E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 SUPERFAMILY SSF48150 7 208 6.91E-73 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.5E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 SMART SM00525 186 206 1.5E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 C3497_08370 96a25f2394bf64f5fb16b016ba460237 210 SMART SM00478 38 185 6.4E-58 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C3497_13005 5493651448bf49d663e74787c27e26b6 702 Pfam PF11842 Domain of unknown function (DUF3362) 572 673 1.1E-43 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal C3497_13005 5493651448bf49d663e74787c27e26b6 702 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 1 624 48.077 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 C3497_13005 5493651448bf49d663e74787c27e26b6 702 Pfam PF08497 Radical SAM N-terminal 1 357 3.6E-135 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal C3497_13005 5493651448bf49d663e74787c27e26b6 702 Pfam PF04055 Radical SAM superfamily 358 563 1.6E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_13005 5493651448bf49d663e74787c27e26b6 702 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 1 622 5.1E-252 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 C3497_13005 5493651448bf49d663e74787c27e26b6 702 SMART SM00729 354 605 5.0E-7 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3497_13005 5493651448bf49d663e74787c27e26b6 702 SUPERFAMILY SSF102114 348 591 3.14E-14 T 14-10-2018 C3497_13005 5493651448bf49d663e74787c27e26b6 702 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 358 378 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 C3497_13005 5493651448bf49d663e74787c27e26b6 702 Gene3D G3DSA:3.80.30.20 354 611 2.4E-14 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C3497_07630 fd8ec98e87cee7a24ced8e858c42bceb 966 Pfam PF02347 Glycine cleavage system P-protein 22 445 1.6E-179 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 C3497_07630 fd8ec98e87cee7a24ced8e858c42bceb 966 Gene3D G3DSA:3.40.640.10 101 359 4.9E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_07630 fd8ec98e87cee7a24ced8e858c42bceb 966 Gene3D G3DSA:3.40.640.10 528 759 8.5E-62 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_07630 fd8ec98e87cee7a24ced8e858c42bceb 966 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 23 958 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 C3497_07630 fd8ec98e87cee7a24ced8e858c42bceb 966 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 14 964 25.466 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 C3497_07630 fd8ec98e87cee7a24ced8e858c42bceb 966 SUPERFAMILY SSF53383 23 445 5.49E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_07630 fd8ec98e87cee7a24ced8e858c42bceb 966 SUPERFAMILY SSF53383 477 959 1.12E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_07630 fd8ec98e87cee7a24ced8e858c42bceb 966 Gene3D G3DSA:3.90.1150.10 772 910 1.2E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_07630 fd8ec98e87cee7a24ced8e858c42bceb 966 Pfam PF01212 Beta-eliminating lyase 548 710 3.0E-8 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 C3497_01445 7a270b5d25a218c7071701d48c264193 577 SUPERFAMILY SSF116726 293 357 7.72E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_01445 7a270b5d25a218c7071701d48c264193 577 SUPERFAMILY SSF116726 202 281 1.96E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_01445 7a270b5d25a218c7071701d48c264193 577 Pfam PF03600 Citrate transporter 15 520 1.7E-33 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 C3497_01445 7a270b5d25a218c7071701d48c264193 577 Pfam PF02080 TrkA-C domain 294 353 5.1E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 C3497_01445 7a270b5d25a218c7071701d48c264193 577 Pfam PF02080 TrkA-C domain 209 276 1.9E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 C3497_01445 7a270b5d25a218c7071701d48c264193 577 Gene3D G3DSA:3.30.70.1450 291 361 3.3E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_01445 7a270b5d25a218c7071701d48c264193 577 Gene3D G3DSA:3.30.70.1450 203 283 4.2E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_06845 d54f44f784e83d645767ecbf2a9bacad 64 SUPERFAMILY SSF140319 1 62 1.57E-26 T 14-10-2018 IPR036762 IscX-like superfamily C3497_06845 d54f44f784e83d645767ecbf2a9bacad 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 1.9E-34 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 C3497_06845 d54f44f784e83d645767ecbf2a9bacad 64 PIRSF PIRSF039003 1 64 4.5E-34 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 C3497_06845 d54f44f784e83d645767ecbf2a9bacad 64 Gene3D G3DSA:1.10.10.600 1 64 3.3E-29 T 14-10-2018 IPR036762 IscX-like superfamily C3497_06845 d54f44f784e83d645767ecbf2a9bacad 64 Pfam PF04384 Iron-sulphur cluster assembly 1 62 4.8E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 C3497_14220 eed8425c25259934436feaf94ce08751 299 SUPERFAMILY SSF103481 191 296 1.31E-12 T 14-10-2018 C3497_14220 eed8425c25259934436feaf94ce08751 299 SUPERFAMILY SSF103481 45 144 1.44E-13 T 14-10-2018 C3497_14220 eed8425c25259934436feaf94ce08751 299 Pfam PF00892 EamA-like transporter family 13 143 8.3E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_14220 eed8425c25259934436feaf94ce08751 299 Pfam PF00892 EamA-like transporter family 156 292 7.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_10635 43dce1d7f70bac7bb81f985255b6a7e7 298 Gene3D G3DSA:1.10.10.10 1 90 1.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_10635 43dce1d7f70bac7bb81f985255b6a7e7 298 Gene3D G3DSA:3.40.190.10 162 268 1.3E-36 T 14-10-2018 C3497_10635 43dce1d7f70bac7bb81f985255b6a7e7 298 SUPERFAMILY SSF53850 87 295 4.89E-36 T 14-10-2018 C3497_10635 43dce1d7f70bac7bb81f985255b6a7e7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.5E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_10635 43dce1d7f70bac7bb81f985255b6a7e7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_10635 43dce1d7f70bac7bb81f985255b6a7e7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_10635 43dce1d7f70bac7bb81f985255b6a7e7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_10635 43dce1d7f70bac7bb81f985255b6a7e7 298 Pfam PF03466 LysR substrate binding domain 87 292 2.6E-36 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_10635 43dce1d7f70bac7bb81f985255b6a7e7 298 Gene3D G3DSA:3.40.190.10 91 287 1.3E-36 T 14-10-2018 C3497_10635 43dce1d7f70bac7bb81f985255b6a7e7 298 SUPERFAMILY SSF46785 1 85 3.07E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_09590 7572506e3ce8d0a7e4f3db492b6fd0f4 439 Gene3D G3DSA:2.30.40.10 14 418 1.8E-161 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3497_09590 7572506e3ce8d0a7e4f3db492b6fd0f4 439 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 6 438 40.784 T 14-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 C3497_09590 7572506e3ce8d0a7e4f3db492b6fd0f4 439 SUPERFAMILY SSF51338 6 419 3.06E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3497_09590 7572506e3ce8d0a7e4f3db492b6fd0f4 439 Pfam PF01979 Amidohydrolase family 62 410 1.5E-78 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C3497_09590 7572506e3ce8d0a7e4f3db492b6fd0f4 439 Gene3D G3DSA:3.20.20.140 65 355 1.8E-161 T 14-10-2018 C3497_09590 7572506e3ce8d0a7e4f3db492b6fd0f4 439 SUPERFAMILY SSF51556 64 363 5.53E-103 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 Gene3D G3DSA:3.30.70.270 131 309 4.1E-40 T 14-10-2018 C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 SMART SM00052 306 552 1.6E-117 T 14-10-2018 IPR001633 EAL domain C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 Gene3D G3DSA:3.20.20.450 310 555 3.2E-102 T 14-10-2018 IPR035919 EAL domain superfamily C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 Pfam PF00563 EAL domain 312 547 4.0E-78 T 14-10-2018 IPR001633 EAL domain C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 Pfam PF00072 Response regulator receiver domain 1 106 1.4E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 Gene3D G3DSA:3.40.50.2300 1 130 6.1E-18 T 14-10-2018 C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 SUPERFAMILY SSF55073 141 297 1.02E-32 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 SUPERFAMILY SSF141868 312 552 1.44E-90 T 14-10-2018 IPR035919 EAL domain superfamily C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 129 294 5.8E-25 T 14-10-2018 IPR000160 GGDEF domain C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 Pfam PF00990 Diguanylate cyclase, GGDEF domain 133 291 2.5E-30 T 14-10-2018 IPR000160 GGDEF domain C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 SMART SM00267 122 296 1.5E-39 T 14-10-2018 IPR000160 GGDEF domain C3497_05910 75baef125a3eb7b1165a98b2b67434f9 555 SUPERFAMILY SSF52172 1 130 1.25E-19 T 14-10-2018 IPR011006 CheY-like superfamily C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 Gene3D G3DSA:3.30.420.40 200 395 9.8E-71 T 14-10-2018 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 PRINTS PR00471 Acetate kinase family signature 373 385 1.2E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 PRINTS PR00471 Acetate kinase family signature 321 337 1.2E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 PRINTS PR00471 Acetate kinase family signature 176 189 1.2E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 PRINTS PR00471 Acetate kinase family signature 4 15 1.2E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 PRINTS PR00471 Acetate kinase family signature 205 226 1.2E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 PRINTS PR00471 Acetate kinase family signature 299 312 1.2E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 SUPERFAMILY SSF53067 1 198 1.1E-58 T 14-10-2018 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 Pfam PF00871 Acetokinase family 4 386 2.9E-107 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 160.535 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 391 6.3E-110 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 PIRSF PIRSF000722 1 395 1.8E-138 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 SUPERFAMILY SSF53067 162 392 8.07E-76 T 14-10-2018 C3497_00390 89edb0c09ec5ff8db0be419169841ef8 395 Gene3D G3DSA:3.30.420.40 1 197 2.1E-61 T 14-10-2018 C3497_07810 942f2e57b0072436ec149271b73b5fff 320 Gene3D G3DSA:3.60.15.10 28 264 9.4E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_07810 942f2e57b0072436ec149271b73b5fff 320 SMART SM00849 61 241 4.5E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_07810 942f2e57b0072436ec149271b73b5fff 320 Pfam PF00753 Metallo-beta-lactamase superfamily 58 241 1.6E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_07810 942f2e57b0072436ec149271b73b5fff 320 SUPERFAMILY SSF56281 12 314 8.54E-62 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_07810 942f2e57b0072436ec149271b73b5fff 320 TIGRFAM TIGR04558 SoxH_rel_PQQ_1: quinoprotein relay system zinc metallohydrolase 1 30 313 1.2E-130 T 14-10-2018 IPR030811 Quinoprotein relay system zinc metallohydrolase 1 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 Gene3D G3DSA:3.30.930.10 1 248 7.2E-121 T 14-10-2018 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 SUPERFAMILY SSF55186 551 709 7.98E-48 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 Pfam PF02272 DHHA1 domain 734 868 1.3E-24 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 Gene3D G3DSA:3.30.54.20 623 675 5.2E-49 T 14-10-2018 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 Gene3D G3DSA:2.40.30.130 460 551 2.3E-9 T 14-10-2018 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 SMART SM00863 652 694 4.7E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 6.6E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 6.6E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 6.6E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 6.6E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 6.6E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 Gene3D G3DSA:3.30.980.10 561 695 5.2E-49 T 14-10-2018 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 SUPERFAMILY SSF55681 2 251 1.04E-109 T 14-10-2018 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 873 203.771 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 Gene3D G3DSA:3.10.310.40 762 869 3.7E-30 T 14-10-2018 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 SUPERFAMILY SSF50447 453 551 9.53E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 SUPERFAMILY SSF101353 252 445 1.19E-60 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 Pfam PF01411 tRNA synthetases class II (A) 5 553 5.3E-222 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 694 8.5E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C3497_03160 b7dd19dd69b4034220d3cd5b90800913 873 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 852 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 SUPERFAMILY SSF55973 236 385 8.24E-70 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.992 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 375 3.0E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 1.3E-46 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 Gene3D G3DSA:3.30.300.10 12 273 9.1E-180 T 14-10-2018 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 SUPERFAMILY SSF55973 4 111 2.35E-45 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 Gene3D G3DSA:3.30.300.10 103 378 9.1E-180 T 14-10-2018 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 SUPERFAMILY SSF55973 117 235 8.24E-52 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 Gene3D G3DSA:3.30.300.10 6 236 9.1E-180 T 14-10-2018 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 1.1E-184 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 PIRSF PIRSF000497 1 387 6.4E-174 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_01305 73c68af3674df48c6879e1eebe1eb71f 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 1.1E-40 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3497_09915 948723f30ef2bd5054852f24e095b5c7 175 PRINTS PR00070 Dihydrofolate reductase signature 45 56 2.5E-16 T 14-10-2018 C3497_09915 948723f30ef2bd5054852f24e095b5c7 175 PRINTS PR00070 Dihydrofolate reductase signature 96 110 2.5E-16 T 14-10-2018 C3497_09915 948723f30ef2bd5054852f24e095b5c7 175 PRINTS PR00070 Dihydrofolate reductase signature 18 28 2.5E-16 T 14-10-2018 C3497_09915 948723f30ef2bd5054852f24e095b5c7 175 PRINTS PR00070 Dihydrofolate reductase signature 32 40 2.5E-16 T 14-10-2018 C3497_09915 948723f30ef2bd5054852f24e095b5c7 175 Gene3D G3DSA:3.40.430.10 6 172 9.2E-60 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C3497_09915 948723f30ef2bd5054852f24e095b5c7 175 SUPERFAMILY SSF53597 6 164 1.31E-56 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C3497_09915 948723f30ef2bd5054852f24e095b5c7 175 Pfam PF00186 Dihydrofolate reductase 7 164 1.5E-58 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 C3497_09915 948723f30ef2bd5054852f24e095b5c7 175 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 18 40 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 C3497_09915 948723f30ef2bd5054852f24e095b5c7 175 PIRSF PIRSF000194 1 167 3.0E-62 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 C3497_01650 4396125c5f2462fa24da5599939a8418 663 Gene3D G3DSA:3.30.470.130 1 450 8.1E-200 T 14-10-2018 C3497_01650 4396125c5f2462fa24da5599939a8418 663 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 324 2.3E-78 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_01650 4396125c5f2462fa24da5599939a8418 663 Pfam PF02785 Biotin carboxylase C-terminal domain 337 445 8.2E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_01650 4396125c5f2462fa24da5599939a8418 663 Pfam PF00364 Biotin-requiring enzyme 599 661 5.9E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3497_01650 4396125c5f2462fa24da5599939a8418 663 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 3.0E-192 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 C3497_01650 4396125c5f2462fa24da5599939a8418 663 SUPERFAMILY SSF51230 586 663 3.66E-19 T 14-10-2018 IPR011053 Single hybrid motif C3497_01650 4396125c5f2462fa24da5599939a8418 663 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 107 6.5E-46 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_01650 4396125c5f2462fa24da5599939a8418 663 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_01650 4396125c5f2462fa24da5599939a8418 663 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_01650 4396125c5f2462fa24da5599939a8418 663 Gene3D G3DSA:2.40.50.100 591 663 5.1E-20 T 14-10-2018 C3497_01650 4396125c5f2462fa24da5599939a8418 663 Gene3D G3DSA:3.30.700.30 452 583 2.5E-26 T 14-10-2018 C3497_01650 4396125c5f2462fa24da5599939a8418 663 SMART SM00878 337 445 7.0E-62 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_01650 4396125c5f2462fa24da5599939a8418 663 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 619 636 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_01650 4396125c5f2462fa24da5599939a8418 663 SUPERFAMILY SSF51246 332 448 4.19E-41 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C3497_01650 4396125c5f2462fa24da5599939a8418 663 SUPERFAMILY SSF56059 83 349 9.19E-67 T 14-10-2018 C3497_01650 4396125c5f2462fa24da5599939a8418 663 SUPERFAMILY SSF52440 1 112 7.91E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3497_14040 3ea8ef24011079ff393269b04b59e625 405 Gene3D G3DSA:3.40.50.12170 7 398 3.6E-105 T 14-10-2018 C3497_14040 3ea8ef24011079ff393269b04b59e625 405 Gene3D G3DSA:3.90.1150.140 225 388 3.6E-105 T 14-10-2018 C3497_14040 3ea8ef24011079ff393269b04b59e625 405 Pfam PF07075 Protein of unknown function (DUF1343) 26 403 2.8E-111 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 C3497_14040 3ea8ef24011079ff393269b04b59e625 405 PIRSF PIRSF016719 2 403 3.4E-102 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 C3497_02980 5179e8cf016104ea9d32d2d7e03db794 408 Gene3D G3DSA:3.40.50.2000 191 363 3.1E-42 T 14-10-2018 C3497_02980 5179e8cf016104ea9d32d2d7e03db794 408 Gene3D G3DSA:3.40.50.2000 1 190 1.5E-35 T 14-10-2018 C3497_02980 5179e8cf016104ea9d32d2d7e03db794 408 Pfam PF00534 Glycosyl transferases group 1 196 362 1.5E-36 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3497_02980 5179e8cf016104ea9d32d2d7e03db794 408 Pfam PF13439 Glycosyltransferase Family 4 14 182 6.1E-34 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_02980 5179e8cf016104ea9d32d2d7e03db794 408 SUPERFAMILY SSF53756 3 379 6.04E-81 T 14-10-2018 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 Gene3D G3DSA:1.10.1160.10 272 350 3.0E-31 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 34 348 3.2E-102 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 SUPERFAMILY SSF50715 351 569 3.5E-71 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 34 573 2.1E-214 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 Gene3D G3DSA:2.40.240.10 359 475 1.5E-43 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 Gene3D G3DSA:3.90.800.10 107 215 1.2E-103 T 14-10-2018 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 Gene3D G3DSA:3.40.50.620 35 254 1.2E-103 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 4 571 52.856 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 SUPERFAMILY SSF52374 34 356 1.69E-96 T 14-10-2018 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 49 1.5E-8 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 PRINTS PR00987 Glutamyl-tRNA synthetase signature 66 79 1.5E-8 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 1.5E-8 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 Gene3D G3DSA:2.40.240.10 476 571 4.9E-33 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_12630 76a66a53836418d9c5d05c12f0e3e164 573 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 351 550 1.0E-54 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_09430 750d2131d13faaed02a1d8479e8d649d 328 Pfam PF01882 Protein of unknown function DUF58 218 293 1.6E-10 T 14-10-2018 IPR002881 Domain of unknown function DUF58 C3497_11820 8f4653dbc7b3bbfcc67716404bb8af93 298 SUPERFAMILY SSF53850 90 293 4.71E-48 T 14-10-2018 C3497_11820 8f4653dbc7b3bbfcc67716404bb8af93 298 SUPERFAMILY SSF46785 3 111 6.8E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_11820 8f4653dbc7b3bbfcc67716404bb8af93 298 Pfam PF03466 LysR substrate binding domain 90 289 9.5E-46 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_11820 8f4653dbc7b3bbfcc67716404bb8af93 298 Gene3D G3DSA:1.10.10.10 3 86 6.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_11820 8f4653dbc7b3bbfcc67716404bb8af93 298 Gene3D G3DSA:3.40.190.290 91 289 5.7E-71 T 14-10-2018 C3497_11820 8f4653dbc7b3bbfcc67716404bb8af93 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.7E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_03190 fe3d697efd70e87d5213d5ab2de5afd0 306 Gene3D G3DSA:3.20.10.10 130 295 1.0E-49 T 14-10-2018 C3497_03190 fe3d697efd70e87d5213d5ab2de5afd0 306 Gene3D G3DSA:3.30.470.10 2 129 2.0E-41 T 14-10-2018 C3497_03190 fe3d697efd70e87d5213d5ab2de5afd0 306 Pfam PF01063 Amino-transferase class IV 36 266 1.9E-52 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 C3497_03190 fe3d697efd70e87d5213d5ab2de5afd0 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 4.1E-136 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 C3497_03190 fe3d697efd70e87d5213d5ab2de5afd0 306 SUPERFAMILY SSF56752 1 303 2.88E-101 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 C3497_07195 f80c6722689427bb7be0cb28fd62c6ce 161 Gene3D G3DSA:3.10.50.40 5 155 7.6E-50 T 14-10-2018 C3497_07195 f80c6722689427bb7be0cb28fd62c6ce 161 SUPERFAMILY SSF54534 5 141 2.16E-30 T 14-10-2018 C3497_07195 f80c6722689427bb7be0cb28fd62c6ce 161 Gene3D G3DSA:2.40.10.330 72 122 7.6E-50 T 14-10-2018 C3497_07195 f80c6722689427bb7be0cb28fd62c6ce 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 87 4.6E-6 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C3497_07650 64c946ae0ff0f863571807b916184e2a 880 SUPERFAMILY SSF51445 57 312 6.67E-43 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C3497_07650 64c946ae0ff0f863571807b916184e2a 880 SUPERFAMILY SSF53448 417 695 1.78E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_07650 64c946ae0ff0f863571807b916184e2a 880 Pfam PF00332 Glycosyl hydrolases family 17 226 312 1.9E-6 T 14-10-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 C3497_07650 64c946ae0ff0f863571807b916184e2a 880 ProSitePatterns PS00587 Glycosyl hydrolases family 17 signature. 227 240 - T 14-10-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 C3497_07650 64c946ae0ff0f863571807b916184e2a 880 Pfam PF13641 Glycosyltransferase like family 2 432 661 3.6E-27 T 14-10-2018 C3497_07650 64c946ae0ff0f863571807b916184e2a 880 Gene3D G3DSA:3.90.550.10 422 645 3.4E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_07650 64c946ae0ff0f863571807b916184e2a 880 Gene3D G3DSA:3.20.20.80 40 327 3.2E-11 T 14-10-2018 C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 SMART SM00994 11 50 4.1E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 316 394 1.9E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 Gene3D G3DSA:3.40.50.300 58 314 5.0E-111 T 14-10-2018 C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 SMART SM01086 316 411 1.2E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 Pfam PF06689 ClpX C4-type zinc finger 12 48 3.7E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 SMART SM00382 112 265 4.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 Gene3D G3DSA:3.30.50.30 2 51 3.8E-25 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 Gene3D G3DSA:1.10.8.60 315 421 6.0E-41 T 14-10-2018 C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 309 7.0E-51 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 SUPERFAMILY SSF57716 12 47 8.98E-12 T 14-10-2018 C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 414 53.948 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 411 2.6E-207 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 C3497_05020 8d9abe00e1ce9a263582b91ea5e65a0a 422 SUPERFAMILY SSF52540 63 400 4.22E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Pfam PF01565 FAD binding domain 165 314 1.5E-25 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Pfam PF02754 Cysteine-rich domain 1029 1118 1.3E-6 T 14-10-2018 IPR004017 Cysteine-rich domain C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Pfam PF02754 Cysteine-rich domain 1154 1239 0.0046 T 14-10-2018 IPR004017 Cysteine-rich domain C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 SUPERFAMILY SSF55103 407 556 1.37E-13 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Gene3D G3DSA:3.30.70.2740 672 745 3.0E-6 T 14-10-2018 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Pfam PF12447 Protein of unknown function (DUF3683) 3 115 1.3E-51 T 14-10-2018 IPR022153 Protein of unknown function DUF3683 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 SUPERFAMILY SSF46548 793 913 1.31E-14 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Pfam PF11880 Domain of unknown function (DUF3400) 1243 1288 7.0E-23 T 14-10-2018 IPR021817 Protein of unknown function DUF3400 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Gene3D G3DSA:3.30.465.40 125 323 2.9E-34 T 14-10-2018 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 SUPERFAMILY SSF56176 126 397 1.59E-55 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 SUPERFAMILY SSF55103 621 782 2.13E-26 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Pfam PF02913 FAD linked oxidases, C-terminal domain 693 781 3.2E-18 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Pfam PF02913 FAD linked oxidases, C-terminal domain 433 550 1.6E-5 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Pfam PF13183 4Fe-4S dicluster domain 817 896 4.3E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 882 893 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_13955 55c814cd0827d26236a47f7f1cd3a27b 1288 Gene3D G3DSA:1.10.1060.10 796 914 1.7E-5 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3497_10020 0334ea89b99ea0d4055f60c53a3adbbd 474 SUPERFAMILY SSF81442 6 462 3.01E-128 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_10020 0334ea89b99ea0d4055f60c53a3adbbd 474 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 6 466 1.3E-235 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 C3497_10020 0334ea89b99ea0d4055f60c53a3adbbd 474 Gene3D G3DSA:1.20.210.10 1 469 9.0E-207 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_10020 0334ea89b99ea0d4055f60c53a3adbbd 474 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 200 255 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_10020 0334ea89b99ea0d4055f60c53a3adbbd 474 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 10 440 3.8E-118 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_10125 914fa46a8b40d538af4513b15b58ae76 408 Gene3D G3DSA:1.20.81.30 258 368 1.0E-25 T 14-10-2018 C3497_10125 914fa46a8b40d538af4513b15b58ae76 408 Gene3D G3DSA:1.20.81.30 56 177 1.0E-24 T 14-10-2018 C3497_10125 914fa46a8b40d538af4513b15b58ae76 408 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 3.3E-24 T 14-10-2018 IPR018076 Type II secretion system F domain C3497_10125 914fa46a8b40d538af4513b15b58ae76 408 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 8.8E-25 T 14-10-2018 IPR018076 Type II secretion system F domain C3497_10125 914fa46a8b40d538af4513b15b58ae76 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 3.9E-12 T 14-10-2018 IPR003004 GspF/PilC family C3497_10125 914fa46a8b40d538af4513b15b58ae76 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 3.9E-12 T 14-10-2018 IPR003004 GspF/PilC family C3497_10125 914fa46a8b40d538af4513b15b58ae76 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 3.9E-12 T 14-10-2018 IPR003004 GspF/PilC family C3497_10125 914fa46a8b40d538af4513b15b58ae76 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 3.9E-12 T 14-10-2018 IPR003004 GspF/PilC family C3497_13850 32895df999ff83dc18fd620cb9283677 407 Gene3D G3DSA:3.40.50.150 224 407 1.1E-66 T 14-10-2018 C3497_13850 32895df999ff83dc18fd620cb9283677 407 SUPERFAMILY SSF53335 213 402 1.35E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_13850 32895df999ff83dc18fd620cb9283677 407 PIRSF PIRSF036428 6 407 1.4E-124 T 14-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 C3497_13850 32895df999ff83dc18fd620cb9283677 407 Pfam PF03602 Conserved hypothetical protein 95 258 330 1.2E-4 T 14-10-2018 C3497_13850 32895df999ff83dc18fd620cb9283677 407 SUPERFAMILY SSF53790 9 212 5.5E-41 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3497_13850 32895df999ff83dc18fd620cb9283677 407 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 198 1.7E-18 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3497_13850 32895df999ff83dc18fd620cb9283677 407 Gene3D G3DSA:3.40.1010.10 9 112 1.9E-14 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3497_13850 32895df999ff83dc18fd620cb9283677 407 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 12 201 3.1E-38 T 14-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 C3497_13850 32895df999ff83dc18fd620cb9283677 407 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 239 359 5.5E-31 T 14-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 C3497_10525 8c9d0909c63153509fbc4fe5a3094bd6 152 Pfam PF12680 SnoaL-like domain 21 119 3.8E-13 T 14-10-2018 IPR037401 SnoaL-like domain C3497_10525 8c9d0909c63153509fbc4fe5a3094bd6 152 SUPERFAMILY SSF54427 17 141 5.71E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3497_10525 8c9d0909c63153509fbc4fe5a3094bd6 152 Gene3D G3DSA:3.10.450.50 17 129 1.2E-21 T 14-10-2018 C3497_13250 ffccd8f9669d81a366f5b3b8167d08e0 197 SUPERFAMILY SSF55718 8 108 9.03E-5 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily C3497_13250 ffccd8f9669d81a366f5b3b8167d08e0 197 Pfam PF02036 SCP-2 sterol transfer family 10 99 1.0E-7 T 14-10-2018 IPR003033 SCP2 sterol-binding domain C3497_02235 cf33e2f336539509ec1b2e3e45ad420e 59 Pfam PF00301 Rubredoxin 9 54 2.0E-22 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C3497_02235 cf33e2f336539509ec1b2e3e45ad420e 59 PIRSF PIRSF000071 5 59 1.2E-25 T 14-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 C3497_02235 cf33e2f336539509ec1b2e3e45ad420e 59 Gene3D G3DSA:2.20.28.10 1 59 4.9E-27 T 14-10-2018 C3497_02235 cf33e2f336539509ec1b2e3e45ad420e 59 PRINTS PR00163 Rubredoxin signature 38 54 6.7E-8 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C3497_02235 cf33e2f336539509ec1b2e3e45ad420e 59 PRINTS PR00163 Rubredoxin signature 8 24 6.7E-8 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C3497_02235 cf33e2f336539509ec1b2e3e45ad420e 59 SUPERFAMILY SSF57802 6 58 3.7E-22 T 14-10-2018 C3497_00320 94272228178a91a15ea691114f93ec99 420 Gene3D G3DSA:3.20.20.10 40 281 9.6E-145 T 14-10-2018 IPR029066 PLP-binding barrel C3497_00320 94272228178a91a15ea691114f93ec99 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 21 417 41.414 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_00320 94272228178a91a15ea691114f93ec99 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 196 209 2.9E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3497_00320 94272228178a91a15ea691114f93ec99 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 374 387 2.9E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3497_00320 94272228178a91a15ea691114f93ec99 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 276 295 2.9E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3497_00320 94272228178a91a15ea691114f93ec99 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 2.9E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3497_00320 94272228178a91a15ea691114f93ec99 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 2.9E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3497_00320 94272228178a91a15ea691114f93ec99 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 231 247 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site C3497_00320 94272228178a91a15ea691114f93ec99 420 Gene3D G3DSA:2.40.37.10 20 413 9.6E-145 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C3497_00320 94272228178a91a15ea691114f93ec99 420 SUPERFAMILY SSF50621 265 417 6.91E-51 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C3497_00320 94272228178a91a15ea691114f93ec99 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 285 4.1E-65 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 C3497_00320 94272228178a91a15ea691114f93ec99 420 SUPERFAMILY SSF51419 32 288 2.88E-78 T 14-10-2018 IPR029066 PLP-binding barrel C3497_00320 94272228178a91a15ea691114f93ec99 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 17 416 3.0E-151 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_00320 94272228178a91a15ea691114f93ec99 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 384 406 5.4E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_00320 94272228178a91a15ea691114f93ec99 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 304 322 5.4E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_00320 94272228178a91a15ea691114f93ec99 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 5.4E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_00320 94272228178a91a15ea691114f93ec99 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 5.4E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_00320 94272228178a91a15ea691114f93ec99 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 36 374 1.4E-24 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 C3497_14310 f7feb3b46ec784285f936766fcd384d4 194 Pfam PF07021 Methionine biosynthesis protein MetW 4 191 1.8E-68 T 14-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 C3497_14310 f7feb3b46ec784285f936766fcd384d4 194 SUPERFAMILY SSF53335 5 167 1.03E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_14310 f7feb3b46ec784285f936766fcd384d4 194 Gene3D G3DSA:3.40.50.150 7 184 3.6E-23 T 14-10-2018 C3497_14310 f7feb3b46ec784285f936766fcd384d4 194 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 4 191 6.5E-72 T 14-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 SUPERFAMILY SSF141868 713 957 2.88E-91 T 14-10-2018 IPR035919 EAL domain superfamily C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 Pfam PF08448 PAS fold 412 523 8.2E-22 T 14-10-2018 IPR013656 PAS fold-4 C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 SMART SM00052 708 953 1.7E-121 T 14-10-2018 IPR001633 EAL domain C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 530 696 3.5E-43 T 14-10-2018 IPR000160 GGDEF domain C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 SMART SM00267 521 698 1.3E-62 T 14-10-2018 IPR000160 GGDEF domain C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 Gene3D G3DSA:3.30.450.20 82 225 1.7E-32 T 14-10-2018 C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 Pfam PF08269 Cache domain 41 323 2.9E-66 T 14-10-2018 IPR004010 Double Cache domain 2 C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 SMART SM01049 195 281 0.25 T 14-10-2018 IPR033480 Single Cache domain 2 C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 SMART SM01049 75 169 2.2E-16 T 14-10-2018 IPR033480 Single Cache domain 2 C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 Gene3D G3DSA:3.30.450.20 392 529 2.0E-29 T 14-10-2018 C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 SUPERFAMILY SSF55785 395 519 9.83E-22 T 14-10-2018 IPR035965 PAS domain superfamily C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 Gene3D G3DSA:3.30.70.270 530 711 3.8E-62 T 14-10-2018 C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 SUPERFAMILY SSF55073 537 700 2.22E-48 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 693 5.1E-47 T 14-10-2018 IPR000160 GGDEF domain C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 Pfam PF00563 EAL domain 714 948 2.7E-73 T 14-10-2018 IPR001633 EAL domain C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 SMART SM00091 406 472 0.0013 T 14-10-2018 IPR000014 PAS domain C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 402 527 8.5E-14 T 14-10-2018 IPR000014 PAS domain C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 Gene3D G3DSA:3.30.450.20 226 337 1.5E-14 T 14-10-2018 C3497_04570 bc00491bc26e655b0223b9f8449ef906 960 Gene3D G3DSA:3.20.20.450 712 960 1.2E-99 T 14-10-2018 IPR035919 EAL domain superfamily C3497_05090 b500b0fd1701415eb3ad9a375de0556e 479 Gene3D G3DSA:3.90.1150.10 104 471 1.2E-91 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_05090 b500b0fd1701415eb3ad9a375de0556e 479 SMART SM00345 12 71 2.3E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_05090 b500b0fd1701415eb3ad9a375de0556e 479 SUPERFAMILY SSF46785 6 75 3.36E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_05090 b500b0fd1701415eb3ad9a375de0556e 479 SUPERFAMILY SSF53383 65 467 4.95E-83 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_05090 b500b0fd1701415eb3ad9a375de0556e 479 Pfam PF00155 Aminotransferase class I and II 145 447 1.6E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_05090 b500b0fd1701415eb3ad9a375de0556e 479 Gene3D G3DSA:1.10.10.10 2 72 2.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_05090 b500b0fd1701415eb3ad9a375de0556e 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 1.0E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_05090 b500b0fd1701415eb3ad9a375de0556e 479 Gene3D G3DSA:3.40.640.10 149 367 1.2E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_07680 6e212f3064eaac17191f3c86ffba4bba 365 PIRSF PIRSF000138 7 365 6.3E-122 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 C3497_07680 6e212f3064eaac17191f3c86ffba4bba 365 SUPERFAMILY SSF51395 14 359 8.55E-92 T 14-10-2018 C3497_07680 6e212f3064eaac17191f3c86ffba4bba 365 Gene3D G3DSA:3.20.20.70 13 365 3.3E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_07680 6e212f3064eaac17191f3c86ffba4bba 365 Pfam PF01070 FMN-dependent dehydrogenase 25 362 2.7E-125 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 C3497_04160 1fae28f7b304502ac8bd7718ba2c7c39 396 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 93 111 8.9E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_04160 1fae28f7b304502ac8bd7718ba2c7c39 396 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 8.9E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_04160 1fae28f7b304502ac8bd7718ba2c7c39 396 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 280 298 8.9E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_04160 1fae28f7b304502ac8bd7718ba2c7c39 396 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 74 90 8.9E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_04160 1fae28f7b304502ac8bd7718ba2c7c39 396 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 350 365 8.9E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_04160 1fae28f7b304502ac8bd7718ba2c7c39 396 SUPERFAMILY SSF53822 51 395 1.61E-75 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_04160 1fae28f7b304502ac8bd7718ba2c7c39 396 Pfam PF13458 Periplasmic binding protein 51 382 2.7E-68 T 14-10-2018 IPR028081 Leucine-binding protein domain C3497_04160 1fae28f7b304502ac8bd7718ba2c7c39 396 Gene3D G3DSA:3.40.50.2300 53 385 1.2E-111 T 14-10-2018 C3497_04160 1fae28f7b304502ac8bd7718ba2c7c39 396 Gene3D G3DSA:3.40.50.2300 171 389 1.2E-111 T 14-10-2018 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 Pfam PF01584 CheW-like domain 548 678 3.9E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 SMART SM00260 535 675 6.4E-27 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 462 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 540 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 521 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 SUPERFAMILY SSF50341 542 675 6.28E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 SMART SM00387 403 543 3.9E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 406 542 4.0E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 SUPERFAMILY SSF55874 360 541 7.28E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 Gene3D G3DSA:3.30.565.10 359 542 4.2E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 Gene3D G3DSA:1.10.287.560 296 358 6.5E-14 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 Gene3D G3DSA:2.40.50.180 566 630 1.5E-34 T 14-10-2018 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 SUPERFAMILY SSF47226 4 129 2.17E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 SMART SM01231 295 358 4.1E-13 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 Gene3D G3DSA:2.30.30.40 543 671 1.5E-34 T 14-10-2018 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 SMART SM00073 5 102 1.2E-30 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 298 358 5.9E-13 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 Pfam PF01627 Hpt domain 8 104 8.0E-19 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 SUPERFAMILY SSF47384 297 359 3.92E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_05940 8241073bd6f2f4eec1d04c9b30c83b4f 686 Gene3D G3DSA:1.20.120.160 1 143 3.5E-41 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_02195 7d18fd69b14d30fb30ac7abe037ddb12 153 SMART SM00732 13 113 6.4E-22 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 C3497_02195 7d18fd69b14d30fb30ac7abe037ddb12 153 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 13 149 22.569 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 C3497_02195 7d18fd69b14d30fb30ac7abe037ddb12 153 SUPERFAMILY SSF53098 13 147 2.58E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_02195 7d18fd69b14d30fb30ac7abe037ddb12 153 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 16 146 3.6E-34 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 C3497_02195 7d18fd69b14d30fb30ac7abe037ddb12 153 Gene3D G3DSA:3.30.420.140 11 148 2.6E-39 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 C3497_02195 7d18fd69b14d30fb30ac7abe037ddb12 153 Pfam PF03652 Holliday junction resolvase 14 146 6.1E-38 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 9.4E-251 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 Gene3D G3DSA:3.30.930.10 117 585 1.1E-196 T 14-10-2018 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 Pfam PF02938 GAD domain 309 408 3.1E-28 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 SUPERFAMILY SSF55261 292 421 8.83E-41 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 Gene3D G3DSA:2.40.50.140 1 106 1.0E-34 T 14-10-2018 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 587 34.084 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 SUPERFAMILY SSF55681 110 588 3.58E-110 T 14-10-2018 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 561 1.5E-110 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 Gene3D G3DSA:3.30.1360.30 273 422 1.1E-196 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 1.6E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 1.6E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 1.6E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 1.6E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.4E-19 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 C3497_10300 c787e4e2752a399e37da28470a5072ba 599 SUPERFAMILY SSF50249 1 105 4.57E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_14660 dcd99b937286c0cf49902e585919b4d5 380 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 375 4.0E-127 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_14660 dcd99b937286c0cf49902e585919b4d5 380 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 378 26.638 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_14660 dcd99b937286c0cf49902e585919b4d5 380 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_14660 dcd99b937286c0cf49902e585919b4d5 380 Pfam PF01098 Cell cycle protein 25 375 1.6E-102 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_14770 f08647aa72853887206f95d48fab08b1 200 Gene3D G3DSA:1.20.950.20 29 162 3.0E-13 T 14-10-2018 C3497_14770 f08647aa72853887206f95d48fab08b1 200 SUPERFAMILY SSF81342 8 177 6.04E-33 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C3497_14770 f08647aa72853887206f95d48fab08b1 200 Pfam PF01292 Prokaryotic cytochrome b561 12 173 1.5E-20 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 C3497_05325 1e6009e13fddc8773c6a982a0e3e03fe 134 Gene3D G3DSA:1.10.760.10 50 133 8.6E-38 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_05325 1e6009e13fddc8773c6a982a0e3e03fe 134 SUPERFAMILY SSF46626 35 130 1.72E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_05325 1e6009e13fddc8773c6a982a0e3e03fe 134 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 52 129 2.2E-17 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_05325 1e6009e13fddc8773c6a982a0e3e03fe 134 PRINTS PR00607 Class IE cytochrome C signature 61 72 4.8E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C3497_05325 1e6009e13fddc8773c6a982a0e3e03fe 134 PRINTS PR00607 Class IE cytochrome C signature 104 116 4.8E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C3497_05325 1e6009e13fddc8773c6a982a0e3e03fe 134 PRINTS PR00607 Class IE cytochrome C signature 72 82 4.8E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C3497_05325 1e6009e13fddc8773c6a982a0e3e03fe 134 PRINTS PR00607 Class IE cytochrome C signature 119 130 4.8E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C3497_14155 60838a38ca2817ea3e059d32947d8930 409 Pfam PF07690 Major Facilitator Superfamily 14 348 3.2E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_14155 60838a38ca2817ea3e059d32947d8930 409 Gene3D G3DSA:1.20.1720.10 8 390 3.5E-103 T 14-10-2018 C3497_14155 60838a38ca2817ea3e059d32947d8930 409 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 368 1.2E-73 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 C3497_14155 60838a38ca2817ea3e059d32947d8930 409 SUPERFAMILY SSF103473 6 390 8.37E-61 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_14535 5f307f8446f340a10625b3b508d95dba 141 Gene3D G3DSA:1.20.120.910 8 139 8.2E-40 T 14-10-2018 C3497_14535 5f307f8446f340a10625b3b508d95dba 141 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 23 131 1.4E-43 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 C3497_14535 5f307f8446f340a10625b3b508d95dba 141 SUPERFAMILY SSF57716 101 138 4.13E-8 T 14-10-2018 C3497_14535 5f307f8446f340a10625b3b508d95dba 141 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 99 134 6.9E-11 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 C3497_14535 5f307f8446f340a10625b3b508d95dba 141 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 19 140 28.292 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 C3497_14535 5f307f8446f340a10625b3b508d95dba 141 SUPERFAMILY SSF109635 5 100 8.5E-31 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily C3497_14535 5f307f8446f340a10625b3b508d95dba 141 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 104 128 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site C3497_02665 dc2ae9a94c19e20c5e25943355603b81 257 Gene3D G3DSA:3.40.190.10 103 207 3.9E-100 T 14-10-2018 C3497_02665 dc2ae9a94c19e20c5e25943355603b81 257 Gene3D G3DSA:3.40.190.10 24 255 3.9E-100 T 14-10-2018 C3497_02665 dc2ae9a94c19e20c5e25943355603b81 257 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 44 256 5.1E-69 T 14-10-2018 IPR004872 Lipoprotein NlpA family C3497_02665 dc2ae9a94c19e20c5e25943355603b81 257 SUPERFAMILY SSF53850 21 257 2.82E-81 T 14-10-2018 C3497_02665 dc2ae9a94c19e20c5e25943355603b81 257 Pfam PF03180 NLPA lipoprotein 22 257 2.3E-97 T 14-10-2018 IPR004872 Lipoprotein NlpA family C3497_02665 dc2ae9a94c19e20c5e25943355603b81 257 PIRSF PIRSF002854 1 257 1.2E-102 T 14-10-2018 IPR004872 Lipoprotein NlpA family C3497_09140 c7b6da308fad40f425c5d3fb83ef5ad6 597 Gene3D G3DSA:3.30.70.270 421 596 3.9E-53 T 14-10-2018 C3497_09140 c7b6da308fad40f425c5d3fb83ef5ad6 597 Pfam PF00990 Diguanylate cyclase, GGDEF domain 436 591 2.7E-43 T 14-10-2018 IPR000160 GGDEF domain C3497_09140 c7b6da308fad40f425c5d3fb83ef5ad6 597 SMART SM00267 424 595 9.9E-61 T 14-10-2018 IPR000160 GGDEF domain C3497_09140 c7b6da308fad40f425c5d3fb83ef5ad6 597 SUPERFAMILY SSF55073 440 594 2.51E-46 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_09140 c7b6da308fad40f425c5d3fb83ef5ad6 597 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 435 595 4.3E-48 T 14-10-2018 IPR000160 GGDEF domain C3497_06890 841129b728c31161b39679979cb1016b 251 Gene3D G3DSA:2.160.10.10 67 190 1.1E-37 T 14-10-2018 C3497_06890 841129b728c31161b39679979cb1016b 251 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 9.3E-7 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_06890 841129b728c31161b39679979cb1016b 251 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 151 5.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_06890 841129b728c31161b39679979cb1016b 251 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 167 2.9E-74 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 C3497_06890 841129b728c31161b39679979cb1016b 251 Gene3D G3DSA:1.10.3130.10 1 66 1.3E-22 T 14-10-2018 C3497_06890 841129b728c31161b39679979cb1016b 251 SUPERFAMILY SSF51161 2 172 1.28E-57 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3497_11505 cafa24233709ab7c28d51571f75e3585 258 SUPERFAMILY SSF52096 1 258 2.05E-93 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_11505 cafa24233709ab7c28d51571f75e3585 258 Gene3D G3DSA:3.90.226.10 2 200 4.6E-78 T 14-10-2018 C3497_11505 cafa24233709ab7c28d51571f75e3585 258 Gene3D G3DSA:1.10.12.10 201 257 1.3E-26 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal C3497_11505 cafa24233709ab7c28d51571f75e3585 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 1.0E-83 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3497_11505 cafa24233709ab7c28d51571f75e3585 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR01098 Topoisomerase IV subunit B signature 377 402 2.1E-34 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR01098 Topoisomerase IV subunit B signature 309 325 2.1E-34 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR01098 Topoisomerase IV subunit B signature 353 376 2.1E-34 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR01098 Topoisomerase IV subunit B signature 29 42 2.1E-34 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR01098 Topoisomerase IV subunit B signature 463 484 2.1E-34 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR01098 Topoisomerase IV subunit B signature 326 341 2.1E-34 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR01098 Topoisomerase IV subunit B signature 181 198 2.1E-34 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 Gene3D G3DSA:3.30.565.10 5 216 1.9E-65 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR00418 DNA topoisomerase II family signature 589 605 4.0E-62 T 14-10-2018 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR00418 DNA topoisomerase II family signature 498 514 4.0E-62 T 14-10-2018 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR00418 DNA topoisomerase II family signature 116 130 4.0E-62 T 14-10-2018 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR00418 DNA topoisomerase II family signature 429 443 4.0E-62 T 14-10-2018 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR00418 DNA topoisomerase II family signature 536 548 4.0E-62 T 14-10-2018 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR00418 DNA topoisomerase II family signature 34 49 4.0E-62 T 14-10-2018 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR00418 DNA topoisomerase II family signature 69 82 4.0E-62 T 14-10-2018 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR00418 DNA topoisomerase II family signature 281 294 4.0E-62 T 14-10-2018 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 PRINTS PR00418 DNA topoisomerase II family signature 516 533 4.0E-62 T 14-10-2018 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 586 649 7.8E-23 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 Pfam PF01751 Toprim domain 428 542 1.8E-12 T 14-10-2018 IPR006171 TOPRIM domain C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 177 3.4E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 ProSitePatterns PS00177 DNA topoisomerase II signature. 431 439 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 Pfam PF00204 DNA gyrase B 228 400 5.2E-37 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 Gene3D G3DSA:3.40.50.670 405 652 5.7E-82 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 5 657 43.498 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 SUPERFAMILY SSF54211 228 396 2.66E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 SUPERFAMILY SSF56719 403 650 7.85E-73 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 SMART SM00433 37 653 2.4E-182 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 SMART SM00387 30 180 6.5E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 Gene3D G3DSA:3.30.230.10 226 404 1.4E-44 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_09380 6f01cceb03dbf212f62716f11ecf1d55 659 SUPERFAMILY SSF55874 7 209 1.46E-55 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_14160 d9913f620254858789e743c819cb3cd1 499 SUPERFAMILY SSF52540 190 494 3.88E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14160 d9913f620254858789e743c819cb3cd1 499 SMART SM00382 210 391 1.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14160 d9913f620254858789e743c819cb3cd1 499 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 392 8.9E-94 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain C3497_14160 d9913f620254858789e743c819cb3cd1 499 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 2.4E-186 T 14-10-2018 IPR004482 Mg chelatase-related protein C3497_14160 d9913f620254858789e743c819cb3cd1 499 SUPERFAMILY SSF54211 12 170 4.17E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_14160 d9913f620254858789e743c819cb3cd1 499 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 1.4E-29 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain C3497_14160 d9913f620254858789e743c819cb3cd1 499 Gene3D G3DSA:3.40.50.300 190 496 7.3E-56 T 14-10-2018 C3497_14160 d9913f620254858789e743c819cb3cd1 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 340 352 4.8E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 C3497_14160 d9913f620254858789e743c819cb3cd1 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 4.8E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 C3497_14160 d9913f620254858789e743c819cb3cd1 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 4.8E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 C3497_14160 d9913f620254858789e743c819cb3cd1 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 4.8E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 C3497_14160 d9913f620254858789e743c819cb3cd1 499 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.2E-44 T 14-10-2018 C3497_14160 d9913f620254858789e743c819cb3cd1 499 Gene3D G3DSA:3.30.230.10 37 168 2.5E-6 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 Pfam PF02824 TGS domain 408 466 1.6E-18 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 Pfam PF13328 HD domain 46 195 2.0E-51 T 14-10-2018 IPR003607 HD/PDEase domain C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 Gene3D G3DSA:3.10.20.30 401 474 6.9E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 SUPERFAMILY SSF55021 650 726 1.41E-9 T 14-10-2018 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 46 724 4.4E-230 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 Gene3D G3DSA:1.10.3210.10 19 210 4.8E-78 T 14-10-2018 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 SUPERFAMILY SSF81271 395 467 5.45E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 Pfam PF04607 Region found in RelA / SpoT proteins 255 365 5.8E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 SMART SM00471 61 173 2.7E-11 T 14-10-2018 IPR003607 HD/PDEase domain C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 Gene3D G3DSA:3.30.70.260 651 732 5.7E-16 T 14-10-2018 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 SMART SM00954 255 365 4.3E-65 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 Gene3D G3DSA:3.30.460.10 213 345 5.5E-46 T 14-10-2018 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 SUPERFAMILY SSF109604 24 209 6.7E-71 T 14-10-2018 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 SUPERFAMILY SSF81301 212 384 1.1E-62 T 14-10-2018 C3497_13140 2d10252d7c69a9f9d07877feeebe614d 734 Pfam PF13291 ACT domain 650 726 6.2E-20 T 14-10-2018 IPR002912 ACT domain C3497_05845 5b388041f826f08ecf9894e02e2b3760 632 Pfam PF13616 PPIC-type PPIASE domain 263 368 2.1E-26 T 14-10-2018 C3497_05845 5b388041f826f08ecf9894e02e2b3760 632 SUPERFAMILY SSF54534 257 367 7.2E-31 T 14-10-2018 C3497_05845 5b388041f826f08ecf9894e02e2b3760 632 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 306 327 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 C3497_05845 5b388041f826f08ecf9894e02e2b3760 632 Pfam PF13624 SurA N-terminal domain 1 161 3.0E-50 T 14-10-2018 C3497_05845 5b388041f826f08ecf9894e02e2b3760 632 Gene3D G3DSA:3.10.50.40 265 369 6.8E-38 T 14-10-2018 C3497_05845 5b388041f826f08ecf9894e02e2b3760 632 SUPERFAMILY SSF109998 39 294 9.42E-32 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C3497_05845 5b388041f826f08ecf9894e02e2b3760 632 Gene3D G3DSA:1.10.4030.30 41 214 2.3E-14 T 14-10-2018 C3497_05845 5b388041f826f08ecf9894e02e2b3760 632 Gene3D G3DSA:1.10.4030.30 236 379 6.8E-38 T 14-10-2018 C3497_14695 3755e846cae0538c459fa5e7aab6a8b1 489 Pfam PF02934 GatB/GatE catalytic domain 8 294 5.8E-109 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 C3497_14695 3755e846cae0538c459fa5e7aab6a8b1 489 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 4 487 8.7E-159 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 C3497_14695 3755e846cae0538c459fa5e7aab6a8b1 489 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 150 164 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 C3497_14695 3755e846cae0538c459fa5e7aab6a8b1 489 Gene3D G3DSA:1.10.150.380 302 419 5.8E-28 T 14-10-2018 C3497_14695 3755e846cae0538c459fa5e7aab6a8b1 489 Pfam PF02637 GatB domain 333 487 1.7E-48 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 C3497_14695 3755e846cae0538c459fa5e7aab6a8b1 489 SMART SM00845 333 487 7.6E-80 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 C3497_14695 3755e846cae0538c459fa5e7aab6a8b1 489 SUPERFAMILY SSF55931 7 301 1.18E-114 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 C3497_14695 3755e846cae0538c459fa5e7aab6a8b1 489 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 5 488 37.148 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 C3497_14695 3755e846cae0538c459fa5e7aab6a8b1 489 Gene3D G3DSA:1.10.10.410 427 489 9.4E-28 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal C3497_14695 3755e846cae0538c459fa5e7aab6a8b1 489 SUPERFAMILY SSF89095 302 408 7.06E-30 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 C3497_11165 ba7602f4cda131f645f5c6679eb5b670 230 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 207 6.5E-100 T 14-10-2018 IPR021548 Protein of unknown function DUF2895 C3497_11165 ba7602f4cda131f645f5c6679eb5b670 230 Pfam PF11444 Protein of unknown function (DUF2895) 6 206 7.1E-93 T 14-10-2018 IPR021548 Protein of unknown function DUF2895 C3497_10200 17603c36954eb87706052f94853db2f2 425 Pfam PF00171 Aldehyde dehydrogenase family 317 381 1.1E-9 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3497_10200 17603c36954eb87706052f94853db2f2 425 Pfam PF00171 Aldehyde dehydrogenase family 12 272 2.6E-14 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3497_10200 17603c36954eb87706052f94853db2f2 425 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 331 352 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3497_10200 17603c36954eb87706052f94853db2f2 425 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 414 1.2E-148 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3497_10200 17603c36954eb87706052f94853db2f2 425 SUPERFAMILY SSF53720 7 424 8.77E-120 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3497_10200 17603c36954eb87706052f94853db2f2 425 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 424 41.994 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3497_10200 17603c36954eb87706052f94853db2f2 425 PIRSF PIRSF000151 1 425 1.4E-176 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 C3497_10200 17603c36954eb87706052f94853db2f2 425 Gene3D G3DSA:3.40.309.10 227 382 3.3E-169 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3497_10200 17603c36954eb87706052f94853db2f2 425 Gene3D G3DSA:3.40.605.10 13 421 3.3E-169 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3497_00970 c08b524ad808614cd093c39fbf598be6 213 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3497_00970 c08b524ad808614cd093c39fbf598be6 213 PIRSF PIRSF001488 3 210 4.6E-41 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL C3497_00970 c08b524ad808614cd093c39fbf598be6 213 Pfam PF01323 DSBA-like thioredoxin domain 48 182 1.1E-12 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 C3497_00970 c08b524ad808614cd093c39fbf598be6 213 Gene3D G3DSA:3.40.30.10 25 213 1.5E-43 T 14-10-2018 C3497_00970 c08b524ad808614cd093c39fbf598be6 213 SUPERFAMILY SSF52833 36 201 1.33E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_09810 fc2f2b12878e3ba5b24df8dc43d00c92 373 Gene3D G3DSA:3.40.390.50 162 256 1.0E-6 T 14-10-2018 C3497_09810 fc2f2b12878e3ba5b24df8dc43d00c92 373 SUPERFAMILY SSF47413 9 72 5.09E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3497_09810 fc2f2b12878e3ba5b24df8dc43d00c92 373 Gene3D G3DSA:1.10.260.40 3 72 8.0E-15 T 14-10-2018 C3497_09810 fc2f2b12878e3ba5b24df8dc43d00c92 373 SMART SM00530 13 69 5.9E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_09810 fc2f2b12878e3ba5b24df8dc43d00c92 373 SMART SM00530 243 291 67.0 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_09810 fc2f2b12878e3ba5b24df8dc43d00c92 373 Pfam PF06114 IrrE N-terminal-like domain 165 295 3.3E-11 T 14-10-2018 IPR010359 IrrE N-terminal-like domain C3497_09810 fc2f2b12878e3ba5b24df8dc43d00c92 373 Pfam PF01381 Helix-turn-helix 14 68 1.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_06145 636be085b44ec04af0dfa566b9c3e099 273 Gene3D G3DSA:1.10.3130.10 5 82 2.5E-22 T 14-10-2018 C3497_06145 636be085b44ec04af0dfa566b9c3e099 273 Gene3D G3DSA:2.160.10.10 83 200 2.2E-36 T 14-10-2018 C3497_06145 636be085b44ec04af0dfa566b9c3e099 273 PIRSF PIRSF000441 15 244 1.0E-84 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 C3497_06145 636be085b44ec04af0dfa566b9c3e099 273 SUPERFAMILY SSF51161 18 186 2.22E-54 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3497_06145 636be085b44ec04af0dfa566b9c3e099 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 142 170 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C3497_06145 636be085b44ec04af0dfa566b9c3e099 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 22 182 1.9E-74 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 C3497_06145 636be085b44ec04af0dfa566b9c3e099 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 167 1.0E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_06145 636be085b44ec04af0dfa566b9c3e099 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 124 2.6E-4 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_12035 9479cb27d34a5a4a4ab0ea14c9d4df49 359 Pfam PF00472 RF-1 domain 215 321 2.6E-42 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 C3497_12035 9479cb27d34a5a4a4ab0ea14c9d4df49 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 2.7E-161 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 C3497_12035 9479cb27d34a5a4a4ab0ea14c9d4df49 359 Gene3D G3DSA:3.30.160.20 223 283 5.5E-35 T 14-10-2018 C3497_12035 9479cb27d34a5a4a4ab0ea14c9d4df49 359 SMART SM00937 67 178 6.1E-65 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 C3497_12035 9479cb27d34a5a4a4ab0ea14c9d4df49 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.074 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 C3497_12035 9479cb27d34a5a4a4ab0ea14c9d4df49 359 Pfam PF03462 PCRF domain 13 203 7.6E-70 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 C3497_12035 9479cb27d34a5a4a4ab0ea14c9d4df49 359 SUPERFAMILY SSF75620 12 353 1.96E-137 T 14-10-2018 C3497_12035 9479cb27d34a5a4a4ab0ea14c9d4df49 359 Gene3D G3DSA:3.30.70.1660 284 359 1.8E-16 T 14-10-2018 C3497_12035 9479cb27d34a5a4a4ab0ea14c9d4df49 359 Gene3D G3DSA:3.30.70.1660 107 222 1.5E-46 T 14-10-2018 C3497_12035 9479cb27d34a5a4a4ab0ea14c9d4df49 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 5.5E-35 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 Gene3D G3DSA:2.40.50.140 1 114 5.6E-47 T 14-10-2018 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 SMART SM01382 124 252 2.4E-88 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 SUPERFAMILY SSF50249 3 125 7.88E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 SUPERFAMILY SSF50104 126 272 1.2E-58 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 3.6E-129 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 PIRSF PIRSF002158 8 275 5.0E-102 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 Gene3D G3DSA:2.30.30.30 118 195 1.8E-31 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 Gene3D G3DSA:4.10.950.10 196 274 1.2E-34 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 SMART SM01383 42 118 3.3E-46 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 8.7E-54 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 C3497_01875 635dd5583dfcfe6f20fd2a1725b1d09a 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.44 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 Gene3D G3DSA:3.30.70.3280 394 532 1.0E-44 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 Pfam PF03144 Elongation factor Tu domain 2 318 384 1.4E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 Pfam PF16658 Class II release factor RF3, C-terminal domain 391 517 1.4E-42 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 PRINTS PR00315 GTP-binding elongation factor signature 107 118 8.4E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 PRINTS PR00315 GTP-binding elongation factor signature 143 152 8.4E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 PRINTS PR00315 GTP-binding elongation factor signature 21 34 8.4E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 PRINTS PR00315 GTP-binding elongation factor signature 91 101 8.4E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 PRINTS PR00315 GTP-binding elongation factor signature 71 79 8.4E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 64 79 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 Gene3D G3DSA:3.40.50.300 116 279 8.6E-106 T 14-10-2018 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 SUPERFAMILY SSF54980 396 469 1.22E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 22 154 1.1E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 SUPERFAMILY SSF50447 265 394 1.9E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 Gene3D G3DSA:3.40.50.300 78 383 8.6E-106 T 14-10-2018 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 SUPERFAMILY SSF52540 15 281 8.53E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 12 532 1.7E-231 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 Pfam PF00009 Elongation factor Tu GTP binding domain 19 281 9.4E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_14445 7b29ab91bf644f63f8198b2f3958ce75 537 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 10 530 51.068 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 C3497_07775 22d7cad7560755b846fc71072b9ff31e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 5.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_07775 22d7cad7560755b846fc71072b9ff31e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 5.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_07775 22d7cad7560755b846fc71072b9ff31e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 5.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_07775 22d7cad7560755b846fc71072b9ff31e 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 1.2E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_07775 22d7cad7560755b846fc71072b9ff31e 213 SMART SM00448 1 111 3.5E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_07775 22d7cad7560755b846fc71072b9ff31e 213 Gene3D G3DSA:3.40.50.12740 1 203 7.6E-58 T 14-10-2018 C3497_07775 22d7cad7560755b846fc71072b9ff31e 213 Pfam PF00072 Response regulator receiver domain 1 112 6.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_07775 22d7cad7560755b846fc71072b9ff31e 213 SUPERFAMILY SSF46894 135 204 3.1E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_07775 22d7cad7560755b846fc71072b9ff31e 213 SUPERFAMILY SSF52172 1 127 1.14E-28 T 14-10-2018 IPR011006 CheY-like superfamily C3497_07775 22d7cad7560755b846fc71072b9ff31e 213 SMART SM00421 140 197 4.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_00685 295f63509d546241645952e8b4b10c6a 104 Pfam PF01455 HupF/HypC family 1 63 7.2E-15 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C3497_00685 295f63509d546241645952e8b4b10c6a 104 Gene3D G3DSA:2.40.50.970 1 75 2.8E-10 T 14-10-2018 IPR037254 HupF/HypC superfamily C3497_00685 295f63509d546241645952e8b4b10c6a 104 SUPERFAMILY SSF159127 1 77 6.28E-16 T 14-10-2018 IPR037254 HupF/HypC superfamily C3497_00685 295f63509d546241645952e8b4b10c6a 104 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 71 3.6E-19 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C3497_00685 295f63509d546241645952e8b4b10c6a 104 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 14-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site C3497_14070 747bb439474a94d018e1acf98aedbed2 518 Gene3D G3DSA:1.10.132.100 374 510 6.5E-12 T 14-10-2018 C3497_14070 747bb439474a94d018e1acf98aedbed2 518 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 17 468 7.5E-101 T 14-10-2018 IPR013381 CRISPR-associated protein Cse1 C3497_14070 747bb439474a94d018e1acf98aedbed2 518 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 17 504 6.9E-49 T 14-10-2018 IPR013381 CRISPR-associated protein Cse1 C3497_12740 0e71fda673f9211f350b5cda6e78f51f 428 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 177 2.8E-14 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain C3497_12740 0e71fda673f9211f350b5cda6e78f51f 428 SUPERFAMILY SSF52317 237 426 1.48E-31 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_12740 0e71fda673f9211f350b5cda6e78f51f 428 Gene3D G3DSA:3.40.50.880 245 420 3.3E-12 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_12740 0e71fda673f9211f350b5cda6e78f51f 428 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 238 417 3.1E-28 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 C3497_12740 0e71fda673f9211f350b5cda6e78f51f 428 SUPERFAMILY SSF52540 6 191 4.09E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12740 0e71fda673f9211f350b5cda6e78f51f 428 Gene3D G3DSA:3.40.50.300 63 203 8.8E-11 T 14-10-2018 C3497_12740 0e71fda673f9211f350b5cda6e78f51f 428 Gene3D G3DSA:3.40.50.300 7 62 9.5E-6 T 14-10-2018 C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 SUPERFAMILY SSF51735 3 245 3.04E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 Gene3D G3DSA:3.40.50.720 1 246 1.7E-81 T 14-10-2018 C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 1.5E-4 T 14-10-2018 C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 3.4E-115 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.8E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.8E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.8E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.8E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.8E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 Pfam PF00106 short chain dehydrogenase 4 195 2.6E-61 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_03935 5e61d251b3b2d94636048f704ac631fa 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3497_00875 172be582bee8e5be16be3d55eaf3feb8 431 SMART SM00487 20 222 2.1E-57 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_00875 172be582bee8e5be16be3d55eaf3feb8 431 SUPERFAMILY SSF52540 73 362 8.3E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00875 172be582bee8e5be16be3d55eaf3feb8 431 Pfam PF00271 Helicase conserved C-terminal domain 243 340 3.1E-28 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_00875 172be582bee8e5be16be3d55eaf3feb8 431 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site C3497_00875 172be582bee8e5be16be3d55eaf3feb8 431 Gene3D G3DSA:3.40.50.300 214 377 3.6E-49 T 14-10-2018 C3497_00875 172be582bee8e5be16be3d55eaf3feb8 431 Pfam PF00270 DEAD/DEAH box helicase 25 192 1.7E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3497_00875 172be582bee8e5be16be3d55eaf3feb8 431 SMART SM00490 259 340 6.3E-34 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_00875 172be582bee8e5be16be3d55eaf3feb8 431 Gene3D G3DSA:3.40.50.300 1 210 4.9E-76 T 14-10-2018 C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 358 3.5E-26 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 354 1.7E-127 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 SUPERFAMILY SSF48019 243 363 2.38E-28 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 Pfam PF13177 DNA polymerase III, delta subunit 20 178 8.6E-41 T 14-10-2018 C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 Gene3D G3DSA:1.10.8.60 8 240 6.5E-103 T 14-10-2018 C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 Gene3D G3DSA:3.40.50.300 13 177 6.5E-103 T 14-10-2018 C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 Gene3D G3DSA:1.20.272.10 242 360 1.3E-35 T 14-10-2018 C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 SUPERFAMILY SSF52540 32 223 3.08E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 Gene3D G3DSA:3.30.300.150 484 596 1.5E-14 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 490 611 1.1E-16 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_02940 95682f6b6dbfc06a6af1b2194b368282 614 SMART SM00382 37 179 7.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 Gene3D G3DSA:3.30.565.10 378 527 3.5E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 SMART SM00388 305 372 3.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 Pfam PF00512 His Kinase A (phospho-acceptor) domain 306 372 3.6E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 SMART SM00387 416 526 1.9E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 Gene3D G3DSA:1.20.120.620 48 152 3.0E-31 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 SUPERFAMILY SSF55874 362 526 9.17E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 Gene3D G3DSA:3.30.450.40 162 295 1.6E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 SUPERFAMILY SSF47384 291 373 9.81E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 523 1.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 1.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 504 1.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 Pfam PF13493 Domain of unknown function (DUF4118) 52 158 4.1E-29 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 SUPERFAMILY SSF55781 156 288 4.77E-5 T 14-10-2018 C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 525 3.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_08120 26cbf1bceac625ef58eb76a70d49002c 535 Gene3D G3DSA:1.10.287.130 296 374 3.9E-15 T 14-10-2018 C3497_01580 61863aea7812dfcbc1b89565010e11e4 393 Gene3D G3DSA:2.40.110.10 135 239 1.4E-35 T 14-10-2018 C3497_01580 61863aea7812dfcbc1b89565010e11e4 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3497_01580 61863aea7812dfcbc1b89565010e11e4 393 Gene3D G3DSA:1.20.140.10 241 393 1.9E-42 T 14-10-2018 C3497_01580 61863aea7812dfcbc1b89565010e11e4 393 SUPERFAMILY SSF56645 7 238 1.31E-73 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3497_01580 61863aea7812dfcbc1b89565010e11e4 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 385 3.3E-28 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3497_01580 61863aea7812dfcbc1b89565010e11e4 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 1.2E-32 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3497_01580 61863aea7812dfcbc1b89565010e11e4 393 SUPERFAMILY SSF47203 242 390 1.22E-42 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3497_01580 61863aea7812dfcbc1b89565010e11e4 393 Gene3D G3DSA:1.10.540.10 3 134 6.0E-40 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3497_01580 61863aea7812dfcbc1b89565010e11e4 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 227 3.1E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3497_06285 34ed0242897acbf840f297a8bae3cd32 240 Gene3D G3DSA:3.30.420.130 103 222 7.2E-31 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily C3497_06285 34ed0242897acbf840f297a8bae3cd32 240 Gene3D G3DSA:1.10.150.590 4 100 5.0E-24 T 14-10-2018 IPR038127 NafY, N-terminal domain superfamily C3497_06285 34ed0242897acbf840f297a8bae3cd32 240 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 117 208 2.8E-19 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis C3497_06285 34ed0242897acbf840f297a8bae3cd32 240 SUPERFAMILY SSF53146 105 220 1.15E-31 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily C3497_06285 34ed0242897acbf840f297a8bae3cd32 240 Pfam PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal 11 93 4.4E-27 T 14-10-2018 IPR031763 Dinitrogenase iron-molybdenum cofactor, N-terminal C3497_06535 7a1c28c26e085e5a0c3389afa303453a 163 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 1.8E-64 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3497_06535 7a1c28c26e085e5a0c3389afa303453a 163 SUPERFAMILY SSF69765 4 159 1.96E-62 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3497_06535 7a1c28c26e085e5a0c3389afa303453a 163 Pfam PF02542 YgbB family 5 158 6.8E-62 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3497_06535 7a1c28c26e085e5a0c3389afa303453a 163 Gene3D G3DSA:3.30.1330.50 3 163 3.9E-67 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3497_06535 7a1c28c26e085e5a0c3389afa303453a 163 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3497_06535 7a1c28c26e085e5a0c3389afa303453a 163 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 34.865 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 Gene3D G3DSA:1.10.8.60 306 380 4.3E-22 T 14-10-2018 C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 220 235 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 Pfam PF08448 PAS fold 15 114 1.2E-15 T 14-10-2018 IPR013656 PAS fold-4 C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 158 171 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 Gene3D G3DSA:3.30.450.20 7 123 2.8E-13 T 14-10-2018 C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 SUPERFAMILY SSF55785 13 116 2.09E-11 T 14-10-2018 IPR035965 PAS domain superfamily C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 SUPERFAMILY SSF52540 134 373 2.87E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 SUPERFAMILY SSF46689 345 442 3.84E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 344 353 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 Pfam PF02954 Bacterial regulatory protein, Fis family 403 442 1.6E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 Gene3D G3DSA:3.40.50.300 124 305 4.3E-64 T 14-10-2018 C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 Gene3D G3DSA:1.10.10.60 402 443 2.6E-9 T 14-10-2018 C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 SMART SM00382 154 297 8.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_08665 0ef064a63ce0660c5ce5b5b39e8248e9 445 Pfam PF00158 Sigma-54 interaction domain 134 300 2.2E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3497_11875 e14290247950c159af8bb517b8792c53 436 Hamap MF_01183 Chaperone SurA [surA]. 10 434 34.548 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 C3497_11875 e14290247950c159af8bb517b8792c53 436 SUPERFAMILY SSF54534 179 282 4.58E-27 T 14-10-2018 C3497_11875 e14290247950c159af8bb517b8792c53 436 Pfam PF00639 PPIC-type PPIASE domain 184 276 6.8E-20 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 C3497_11875 e14290247950c159af8bb517b8792c53 436 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 328 348 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 C3497_11875 e14290247950c159af8bb517b8792c53 436 Gene3D G3DSA:1.10.4030.30 33 283 9.6E-75 T 14-10-2018 C3497_11875 e14290247950c159af8bb517b8792c53 436 Gene3D G3DSA:3.10.50.40 178 280 9.6E-75 T 14-10-2018 C3497_11875 e14290247950c159af8bb517b8792c53 436 Pfam PF13616 PPIC-type PPIASE domain 290 389 1.9E-25 T 14-10-2018 C3497_11875 e14290247950c159af8bb517b8792c53 436 SUPERFAMILY SSF54534 291 390 7.2E-32 T 14-10-2018 C3497_11875 e14290247950c159af8bb517b8792c53 436 SUPERFAMILY SSF109998 32 207 1.92E-42 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C3497_11875 e14290247950c159af8bb517b8792c53 436 Gene3D G3DSA:3.10.50.40 287 426 2.8E-41 T 14-10-2018 C3497_11875 e14290247950c159af8bb517b8792c53 436 Pfam PF09312 SurA N-terminal domain 32 149 3.1E-37 T 14-10-2018 IPR015391 SurA N-terminal C3497_00180 f820951f85c102512f04d8d4f5d2e785 429 SUPERFAMILY SSF56935 26 429 4.58E-85 T 14-10-2018 C3497_00180 f820951f85c102512f04d8d4f5d2e785 429 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 429 8.2E-100 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) C3497_00180 f820951f85c102512f04d8d4f5d2e785 429 Gene3D G3DSA:2.40.160.60 26 429 1.1E-121 T 14-10-2018 C3497_01525 0fdf09f612dcccbd7434b8e5ee2abd32 300 Gene3D G3DSA:3.40.50.1980 41 158 1.1E-39 T 14-10-2018 C3497_01525 0fdf09f612dcccbd7434b8e5ee2abd32 300 Pfam PF01497 Periplasmic binding protein 44 268 8.0E-32 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain C3497_01525 0fdf09f612dcccbd7434b8e5ee2abd32 300 SUPERFAMILY SSF53807 22 288 8.24E-68 T 14-10-2018 C3497_01525 0fdf09f612dcccbd7434b8e5ee2abd32 300 Gene3D G3DSA:3.40.50.1980 162 291 4.2E-30 T 14-10-2018 C3497_13265 7aa1d222ea4ae8a68e97d8974278a29c 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 134 1.6E-42 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13265 7aa1d222ea4ae8a68e97d8974278a29c 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 132 21.469 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13265 7aa1d222ea4ae8a68e97d8974278a29c 141 SUPERFAMILY SSF51344 3 87 1.7E-22 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13265 7aa1d222ea4ae8a68e97d8974278a29c 141 SUPERFAMILY SSF46604 90 138 5.49E-14 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13265 7aa1d222ea4ae8a68e97d8974278a29c 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 8.0E-10 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain C3497_13265 7aa1d222ea4ae8a68e97d8974278a29c 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 91 1.0E-37 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13265 7aa1d222ea4ae8a68e97d8974278a29c 141 Gene3D G3DSA:1.20.5.440 92 134 7.0E-16 T 14-10-2018 C3497_13265 7aa1d222ea4ae8a68e97d8974278a29c 141 Gene3D G3DSA:2.60.15.10 3 91 6.3E-29 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13265 7aa1d222ea4ae8a68e97d8974278a29c 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 7.6E-28 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_03005 37cf93ae30045632156ae0ca45f25656 577 Pfam PF07244 Surface antigen variable number repeat 127 192 9.0E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C3497_03005 37cf93ae30045632156ae0ca45f25656 577 Gene3D G3DSA:3.10.20.310 195 271 5.8E-11 T 14-10-2018 C3497_03005 37cf93ae30045632156ae0ca45f25656 577 Pfam PF01103 Surface antigen 372 560 2.1E-26 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 C3497_03005 37cf93ae30045632156ae0ca45f25656 577 Gene3D G3DSA:2.40.160.50 272 574 3.6E-67 T 14-10-2018 C3497_04425 3b9f0aead5a5e69f57d975c6a9a81f06 349 Pfam PF00146 NADH dehydrogenase 24 337 9.7E-127 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04425 3b9f0aead5a5e69f57d975c6a9a81f06 349 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 63 78 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04425 3b9f0aead5a5e69f57d975c6a9a81f06 349 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 229 242 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04425 3b9f0aead5a5e69f57d975c6a9a81f06 349 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 17 344 25.177 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_01530 906fe6c00c8dc4ad341d81da458f2adc 328 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 320 5.0E-107 T 14-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 C3497_01530 906fe6c00c8dc4ad341d81da458f2adc 328 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 187 200 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 C3497_01530 906fe6c00c8dc4ad341d81da458f2adc 328 Gene3D G3DSA:3.40.640.10 34 235 1.7E-50 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_01530 906fe6c00c8dc4ad341d81da458f2adc 328 Pfam PF00155 Aminotransferase class I and II 56 306 3.7E-33 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_01530 906fe6c00c8dc4ad341d81da458f2adc 328 Gene3D G3DSA:3.90.1150.10 22 302 1.7E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_01530 906fe6c00c8dc4ad341d81da458f2adc 328 SUPERFAMILY SSF53383 3 319 7.87E-56 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_12485 7d24aebf751add0bf95ec104852a939c 230 Gene3D G3DSA:1.10.3810.10 50 229 1.9E-58 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12485 7d24aebf751add0bf95ec104852a939c 230 Pfam PF00912 Transglycosylase 59 216 2.4E-55 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12485 7d24aebf751add0bf95ec104852a939c 230 SUPERFAMILY SSF53955 57 218 1.21E-60 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_12485 7d24aebf751add0bf95ec104852a939c 230 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 10 230 39.293 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12485 7d24aebf751add0bf95ec104852a939c 230 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 14 229 6.5E-86 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_07890 4db4d44043a676f3aa928d03d7d5d868 319 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 62 73 7.7E-12 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 C3497_07890 4db4d44043a676f3aa928d03d7d5d868 319 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 105 119 7.7E-12 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 C3497_07890 4db4d44043a676f3aa928d03d7d5d868 319 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 36 44 7.7E-12 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 C3497_07890 4db4d44043a676f3aa928d03d7d5d868 319 Gene3D G3DSA:3.40.50.1820 2 312 9.1E-84 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_07890 4db4d44043a676f3aa928d03d7d5d868 319 SUPERFAMILY SSF53474 8 302 1.65E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_07890 4db4d44043a676f3aa928d03d7d5d868 319 PIRSF PIRSF006431 1 314 1.1E-102 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 C3497_07890 4db4d44043a676f3aa928d03d7d5d868 319 Pfam PF00561 alpha/beta hydrolase fold 39 296 2.9E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_01920 b1b5fbde92aef3f476bb773fecd26d1e 179 PIRSF PIRSF002161 1 179 2.2E-65 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01920 b1b5fbde92aef3f476bb773fecd26d1e 179 Gene3D G3DSA:3.30.1440.10 1 179 6.7E-80 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01920 b1b5fbde92aef3f476bb773fecd26d1e 179 Pfam PF00281 Ribosomal protein L5 24 80 5.1E-28 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01920 b1b5fbde92aef3f476bb773fecd26d1e 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.8E-40 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01920 b1b5fbde92aef3f476bb773fecd26d1e 179 SUPERFAMILY SSF55282 3 179 1.84E-78 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01920 b1b5fbde92aef3f476bb773fecd26d1e 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01920 b1b5fbde92aef3f476bb773fecd26d1e 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.297 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 Gene3D G3DSA:3.30.450.20 74 194 4.0E-17 T 14-10-2018 C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 SUPERFAMILY SSF55785 91 200 1.59E-15 T 14-10-2018 IPR035965 PAS domain superfamily C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 SMART SM00086 155 197 0.0012 T 14-10-2018 IPR001610 PAC motif C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 Pfam PF08448 PAS fold 96 198 1.3E-10 T 14-10-2018 IPR013656 PAS fold-4 C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 Pfam PF00990 Diguanylate cyclase, GGDEF domain 360 517 9.5E-44 T 14-10-2018 IPR000160 GGDEF domain C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 357 520 2.3E-44 T 14-10-2018 IPR000160 GGDEF domain C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 Gene3D G3DSA:3.30.450.20 218 357 1.5E-13 T 14-10-2018 C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 SUPERFAMILY SSF55785 226 347 5.23E-10 T 14-10-2018 IPR035965 PAS domain superfamily C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 SMART SM00267 349 521 2.3E-55 T 14-10-2018 IPR000160 GGDEF domain C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 Gene3D G3DSA:3.30.70.270 358 526 4.0E-56 T 14-10-2018 C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 SMART SM00091 230 295 0.078 T 14-10-2018 IPR000014 PAS domain C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 SMART SM00091 81 149 1.3 T 14-10-2018 IPR000014 PAS domain C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 Pfam PF12860 PAS fold 236 353 3.8E-9 T 14-10-2018 C3497_03500 871337074aaa0099fc1e4c55360c83c1 544 SUPERFAMILY SSF55073 365 522 3.37E-48 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_10430 06fb024cf10c08ccbe760f3be6b1d3f7 366 Gene3D G3DSA:3.40.50.2000 16 359 8.1E-60 T 14-10-2018 C3497_10430 06fb024cf10c08ccbe760f3be6b1d3f7 366 Gene3D G3DSA:3.40.50.2000 166 346 8.1E-60 T 14-10-2018 C3497_10430 06fb024cf10c08ccbe760f3be6b1d3f7 366 Pfam PF00534 Glycosyl transferases group 1 182 336 7.5E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3497_10430 06fb024cf10c08ccbe760f3be6b1d3f7 366 Pfam PF13439 Glycosyltransferase Family 4 18 169 1.1E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_10430 06fb024cf10c08ccbe760f3be6b1d3f7 366 SUPERFAMILY SSF53756 7 360 3.1E-68 T 14-10-2018 C3497_00815 b72202f545f7089c359694df9d9081eb 95 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 6 95 2.0E-49 T 14-10-2018 IPR009359 Phenylacetic acid degradation B C3497_00815 b72202f545f7089c359694df9d9081eb 95 Pfam PF06243 Phenylacetic acid degradation B 5 92 8.9E-41 T 14-10-2018 IPR009359 Phenylacetic acid degradation B C3497_00815 b72202f545f7089c359694df9d9081eb 95 Gene3D G3DSA:3.10.20.520 1 65 6.8E-33 T 14-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B C3497_00815 b72202f545f7089c359694df9d9081eb 95 PIRSF PIRSF030200 1 95 1.8E-44 T 14-10-2018 IPR009359 Phenylacetic acid degradation B C3497_04895 a16f633bec35afb8cb5335a3cc030727 339 Gene3D G3DSA:3.40.190.10 124 337 9.7E-121 T 14-10-2018 C3497_04895 a16f633bec35afb8cb5335a3cc030727 339 Gene3D G3DSA:3.40.190.10 28 301 9.7E-121 T 14-10-2018 C3497_04895 a16f633bec35afb8cb5335a3cc030727 339 SUPERFAMILY SSF53850 26 335 1.59E-79 T 14-10-2018 C3497_04895 a16f633bec35afb8cb5335a3cc030727 339 PIRSF PIRSF002825 4 339 3.2E-83 T 14-10-2018 IPR026045 Ferric binding protein C3497_04895 a16f633bec35afb8cb5335a3cc030727 339 Pfam PF13343 Bacterial extracellular solute-binding protein 73 307 8.2E-25 T 14-10-2018 C3497_06800 cfc3704bbaaa18a1f4eca8461c632baf 371 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 225 354 1.0E-40 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 C3497_06800 cfc3704bbaaa18a1f4eca8461c632baf 371 SMART SM00771 221 346 6.8E-41 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 C3497_06800 cfc3704bbaaa18a1f4eca8461c632baf 371 Gene3D G3DSA:3.30.1400.10 221 354 2.1E-24 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 C3497_06800 cfc3704bbaaa18a1f4eca8461c632baf 371 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 225 345 6.4E-34 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 C3497_06800 cfc3704bbaaa18a1f4eca8461c632baf 371 SUPERFAMILY SSF64383 220 353 7.19E-34 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 C3497_02550 2d811072aedaf5556687df79bc4bba09 283 Gene3D G3DSA:3.30.70.890 165 282 7.4E-33 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily C3497_02550 2d811072aedaf5556687df79bc4bba09 283 Gene3D G3DSA:3.30.230.10 2 163 1.1E-52 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_02550 2d811072aedaf5556687df79bc4bba09 283 Pfam PF08544 GHMP kinases C terminal 208 264 5.7E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain C3497_02550 2d811072aedaf5556687df79bc4bba09 283 SUPERFAMILY SSF54211 12 163 7.21E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_02550 2d811072aedaf5556687df79bc4bba09 283 Pfam PF00288 GHMP kinases N terminal domain 91 148 2.5E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 C3497_02550 2d811072aedaf5556687df79bc4bba09 283 SUPERFAMILY SSF55060 165 278 4.7E-34 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily C3497_02550 2d811072aedaf5556687df79bc4bba09 283 PIRSF PIRSF010376 7 281 1.3E-85 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 C3497_02550 2d811072aedaf5556687df79bc4bba09 283 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 9 270 32.625 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 C3497_02550 2d811072aedaf5556687df79bc4bba09 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 280 1.4E-76 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 C3497_10550 4e09c078008829e862c513273ec66689 414 Gene3D G3DSA:3.40.50.150 142 413 1.0E-95 T 14-10-2018 C3497_10550 4e09c078008829e862c513273ec66689 414 PIRSF PIRSF003085 25 414 2.6E-124 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 C3497_10550 4e09c078008829e862c513273ec66689 414 SUPERFAMILY SSF53335 143 408 3.91E-75 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_10550 4e09c078008829e862c513273ec66689 414 Pfam PF02353 Mycolic acid cyclopropane synthetase 137 405 5.6E-85 T 14-10-2018 C3497_03175 7fa568c9ed7ecbefcc1cf080f543dcad 320 Gene3D G3DSA:3.40.50.1820 37 300 1.9E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_03175 7fa568c9ed7ecbefcc1cf080f543dcad 320 PIRSF PIRSF005211 2 319 2.9E-106 T 14-10-2018 IPR012020 AB hydrolase 4 family C3497_03175 7fa568c9ed7ecbefcc1cf080f543dcad 320 SUPERFAMILY SSF53474 9 315 1.33E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_03175 7fa568c9ed7ecbefcc1cf080f543dcad 320 Pfam PF00561 alpha/beta hydrolase fold 57 298 1.1E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_09150 e191860286e95d0433b9a8799e69d16d 1155 Pfam PF13489 Methyltransferase domain 42 204 5.5E-16 T 14-10-2018 C3497_09150 e191860286e95d0433b9a8799e69d16d 1155 SUPERFAMILY SSF53335 35 231 5.88E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_09150 e191860286e95d0433b9a8799e69d16d 1155 Gene3D G3DSA:3.90.550.10 590 776 8.5E-13 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_09150 e191860286e95d0433b9a8799e69d16d 1155 Gene3D G3DSA:3.40.50.150 40 230 5.0E-40 T 14-10-2018 C3497_09150 e191860286e95d0433b9a8799e69d16d 1155 SUPERFAMILY SSF53448 607 813 9.23E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_09150 e191860286e95d0433b9a8799e69d16d 1155 SUPERFAMILY SSF53756 903 1151 3.08E-14 T 14-10-2018 C3497_09150 e191860286e95d0433b9a8799e69d16d 1155 Gene3D G3DSA:3.90.550.10 376 527 1.5E-8 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_09150 e191860286e95d0433b9a8799e69d16d 1155 Gene3D G3DSA:3.40.50.2000 953 1139 1.5E-8 T 14-10-2018 C3497_09150 e191860286e95d0433b9a8799e69d16d 1155 SUPERFAMILY SSF53448 316 511 1.46E-10 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_06810 74fa535a93452c34b116e2deb6a5219c 398 Pfam PF00155 Aminotransferase class I and II 32 391 1.8E-44 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_06810 74fa535a93452c34b116e2deb6a5219c 398 SUPERFAMILY SSF53383 2 397 1.79E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_06810 74fa535a93452c34b116e2deb6a5219c 398 Gene3D G3DSA:3.90.1150.10 13 381 2.7E-112 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_06810 74fa535a93452c34b116e2deb6a5219c 398 Gene3D G3DSA:3.40.640.10 43 292 2.7E-112 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_06810 74fa535a93452c34b116e2deb6a5219c 398 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 395 8.2E-192 T 14-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 C3497_08290 9204367ad6ba58aca3edefbb66d28015 348 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 336 3.4E-137 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_08290 9204367ad6ba58aca3edefbb66d28015 348 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 346 46.7 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_08290 9204367ad6ba58aca3edefbb66d28015 348 SUPERFAMILY SSF56042 172 341 5.53E-58 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_08290 9204367ad6ba58aca3edefbb66d28015 348 Gene3D G3DSA:3.90.650.10 172 346 4.8E-67 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_08290 9204367ad6ba58aca3edefbb66d28015 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 340 2.7E-35 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C3497_08290 9204367ad6ba58aca3edefbb66d28015 348 Gene3D G3DSA:3.30.1330.10 7 171 9.6E-69 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_08290 9204367ad6ba58aca3edefbb66d28015 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 1.7E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain C3497_08290 9204367ad6ba58aca3edefbb66d28015 348 SUPERFAMILY SSF55326 8 171 1.5E-53 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 241 9.0E-38 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Pfam PF10410 DnaB-helicase binding domain of primase 361 408 8.2E-11 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Gene3D G3DSA:3.90.980.10 105 230 1.1E-38 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 SMART SM00766 462 587 8.7E-14 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Gene3D G3DSA:1.10.860.10 455 597 2.2E-12 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 SUPERFAMILY SSF57783 1 95 3.06E-37 T 14-10-2018 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Gene3D G3DSA:3.40.1360.10 231 357 2.3E-43 T 14-10-2018 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 SMART SM00400 33 87 3.8E-33 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Pfam PF08278 DNA primase DnaG DnaB-binding 462 586 1.6E-20 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 SUPERFAMILY SSF117023 458 591 1.57E-18 T 14-10-2018 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Gene3D G3DSA:3.90.580.10 1 97 6.1E-39 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 SUPERFAMILY SSF56731 112 398 6.28E-102 T 14-10-2018 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Hamap MF_00974 DNA primase [dnaG]. 1 587 28.164 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Pfam PF13662 Toprim domain 250 315 2.7E-16 T 14-10-2018 IPR006171 TOPRIM domain C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 SMART SM00493 249 320 1.8E-20 T 14-10-2018 IPR006171 TOPRIM domain C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Pfam PF01807 CHC2 zinc finger 3 96 9.9E-38 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 TIGRFAM TIGR01391 dnaG: DNA primase 1 407 6.6E-141 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 C3497_12225 05b8467c5ffb328a93519ffd6910c985 602 Gene3D G3DSA:1.20.50.20 358 409 2.0E-6 T 14-10-2018 C3497_02050 1769b50be5dd06ff731a3b10419283dd 384 Pfam PF00155 Aminotransferase class I and II 42 374 2.1E-29 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_02050 1769b50be5dd06ff731a3b10419283dd 384 Gene3D G3DSA:3.90.1150.10 20 374 7.3E-128 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_02050 1769b50be5dd06ff731a3b10419283dd 384 SUPERFAMILY SSF53383 5 381 9.08E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_02050 1769b50be5dd06ff731a3b10419283dd 384 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 7 379 2.3E-136 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 C3497_02050 1769b50be5dd06ff731a3b10419283dd 384 Gene3D G3DSA:3.40.640.10 59 282 7.3E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_13200 8e5d21291e59d39f826eb90dacbdbc19 67 Gene3D G3DSA:3.10.20.30 4 67 1.9E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_13200 8e5d21291e59d39f826eb90dacbdbc19 67 SUPERFAMILY SSF54285 3 66 1.74E-18 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp C3497_13200 8e5d21291e59d39f826eb90dacbdbc19 67 Pfam PF02597 ThiS family 7 67 1.6E-14 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 C3497_13200 8e5d21291e59d39f826eb90dacbdbc19 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 67 4.3E-21 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis C3497_04340 c36e1ec7a0f3ba47adadd864a9fb2e8d 117 Gene3D G3DSA:3.40.30.10 1 108 9.2E-45 T 14-10-2018 C3497_04340 c36e1ec7a0f3ba47adadd864a9fb2e8d 117 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 117 3.6E-47 T 14-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 Gene3D G3DSA:3.30.70.870 306 589 5.3E-134 T 14-10-2018 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 Gene3D G3DSA:2.40.50.250 482 598 5.3E-134 T 14-10-2018 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 Gene3D G3DSA:3.30.70.240 389 481 5.3E-134 T 14-10-2018 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 4.4E-55 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 SUPERFAMILY SSF54980 302 387 4.32E-14 T 14-10-2018 IPR035647 EF-G domain III/V-like C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 Gene3D G3DSA:2.40.30.10 199 299 3.6E-31 T 14-10-2018 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 SUPERFAMILY SSF54980 398 512 2.54E-31 T 14-10-2018 IPR035647 EF-G domain III/V-like C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 Pfam PF03144 Elongation factor Tu domain 2 222 289 1.1E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 Pfam PF00679 Elongation factor G C-terminus 396 480 3.8E-24 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 139 7.4E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 SMART SM00838 395 483 0.0013 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 598 6.4E-295 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 SUPERFAMILY SSF52540 4 207 4.67E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 Gene3D G3DSA:3.40.50.300 2 198 4.1E-67 T 14-10-2018 C3497_06785 f4b1f9f482686c81c7a8124f8fcadb77 605 SUPERFAMILY SSF50447 151 299 1.06E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_08485 f59517685e73169124dfc60ba33abd33 308 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 308 61.948 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 C3497_08485 f59517685e73169124dfc60ba33abd33 308 Pfam PF03186 CobD/Cbib protein 28 283 7.7E-26 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 C3497_13680 273b77c82d5666f1a673ce9646e790c9 327 Pfam PF05598 Transposase domain (DUF772) 50 124 7.4E-22 T 14-10-2018 IPR008490 Transposase InsH, N-terminal C3497_13680 273b77c82d5666f1a673ce9646e790c9 327 Pfam PF01609 Transposase DDE domain 137 311 1.9E-28 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_05640 273b77c82d5666f1a673ce9646e790c9 327 Pfam PF05598 Transposase domain (DUF772) 50 124 7.4E-22 T 14-10-2018 IPR008490 Transposase InsH, N-terminal C3497_05640 273b77c82d5666f1a673ce9646e790c9 327 Pfam PF01609 Transposase DDE domain 137 311 1.9E-28 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_01760 c220da7b34d7cffa9e7926d4c673d9f1 1186 Gene3D G3DSA:3.40.920.10 739 943 1.8E-17 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 C3497_01760 c220da7b34d7cffa9e7926d4c673d9f1 1186 SUPERFAMILY SSF52518 27 210 1.29E-21 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_01760 c220da7b34d7cffa9e7926d4c673d9f1 1186 SUPERFAMILY SSF52518 456 643 1.53E-15 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_01760 c220da7b34d7cffa9e7926d4c673d9f1 1186 SUPERFAMILY SSF52922 277 416 3.81E-7 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3497_01760 c220da7b34d7cffa9e7926d4c673d9f1 1186 SUPERFAMILY SSF53323 742 982 8.63E-29 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 C3497_01760 c220da7b34d7cffa9e7926d4c673d9f1 1186 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 476 562 6.2E-7 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 C3497_01760 c220da7b34d7cffa9e7926d4c673d9f1 1186 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 750 937 4.9E-24 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 C3497_01760 c220da7b34d7cffa9e7926d4c673d9f1 1186 Gene3D G3DSA:3.40.50.970 16 229 4.0E-29 T 14-10-2018 C3497_00395 882e973ffde7b36ce7da5d67d1db533a 470 Pfam PF01575 MaoC like domain 27 116 9.7E-18 T 14-10-2018 IPR002539 MaoC-like dehydratase domain C3497_00395 882e973ffde7b36ce7da5d67d1db533a 470 Gene3D G3DSA:3.10.129.10 7 162 6.1E-40 T 14-10-2018 C3497_00395 882e973ffde7b36ce7da5d67d1db533a 470 Gene3D G3DSA:3.40.718.10 167 462 1.7E-96 T 14-10-2018 C3497_00395 882e973ffde7b36ce7da5d67d1db533a 470 Pfam PF01515 Phosphate acetyl/butaryl transferase 245 456 4.2E-43 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 C3497_00395 882e973ffde7b36ce7da5d67d1db533a 470 SUPERFAMILY SSF54637 10 148 8.59E-34 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_00395 882e973ffde7b36ce7da5d67d1db533a 470 SUPERFAMILY SSF53659 179 462 6.99E-68 T 14-10-2018 C3497_08945 90de66f25e99e1ba0e1514d45a9b244e 406 PIRSF PIRSF037420 19 390 1.4E-137 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E C3497_08945 90de66f25e99e1ba0e1514d45a9b244e 406 Pfam PF04055 Radical SAM superfamily 32 183 6.9E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_08945 90de66f25e99e1ba0e1514d45a9b244e 406 Gene3D G3DSA:3.20.20.70 27 237 1.2E-47 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_08945 90de66f25e99e1ba0e1514d45a9b244e 406 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 25 378 2.3E-190 T 14-10-2018 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ C3497_08945 90de66f25e99e1ba0e1514d45a9b244e 406 SUPERFAMILY SSF102114 24 350 2.49E-68 T 14-10-2018 C3497_08945 90de66f25e99e1ba0e1514d45a9b244e 406 Pfam PF13353 4Fe-4S single cluster domain 29 116 6.4E-9 T 14-10-2018 C3497_12305 f8a87ace5a0f56fb9b15a2b140973e65 274 Pfam PF01553 Acyltransferase 50 162 6.2E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3497_12305 f8a87ace5a0f56fb9b15a2b140973e65 274 SUPERFAMILY SSF69593 34 181 5.1E-24 T 14-10-2018 C3497_12305 f8a87ace5a0f56fb9b15a2b140973e65 274 SMART SM00563 52 164 9.8E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3497_14555 4599fa8f2060c4a750b77030f62c7a76 207 Gene3D G3DSA:3.40.30.10 2 205 7.9E-90 T 14-10-2018 C3497_14555 4599fa8f2060c4a750b77030f62c7a76 207 SUPERFAMILY SSF52833 1 84 2.87E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_14555 4599fa8f2060c4a750b77030f62c7a76 207 SUPERFAMILY SSF47616 77 204 9.41E-40 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C3497_14555 4599fa8f2060c4a750b77030f62c7a76 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 83 4.0E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3497_14555 4599fa8f2060c4a750b77030f62c7a76 207 Gene3D G3DSA:1.20.1050.10 87 196 7.9E-90 T 14-10-2018 C3497_14555 4599fa8f2060c4a750b77030f62c7a76 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 197 3.0E-12 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal C3497_01925 7e1d50a49d1464f4262d82dec3f428f7 101 SUPERFAMILY SSF57716 2 101 1.85E-37 T 14-10-2018 C3497_01925 7e1d50a49d1464f4262d82dec3f428f7 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.314 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid C3497_01925 7e1d50a49d1464f4262d82dec3f428f7 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01925 7e1d50a49d1464f4262d82dec3f428f7 101 Gene3D G3DSA:4.10.830.10 40 101 8.6E-24 T 14-10-2018 C3497_01925 7e1d50a49d1464f4262d82dec3f428f7 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 6.8E-27 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_06515 7141ff8df26251472719e63a10ca3a77 222 SUPERFAMILY SSF53474 10 173 9.41E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_06515 7141ff8df26251472719e63a10ca3a77 222 Gene3D G3DSA:3.40.50.1820 1 208 1.1E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_02165 4e10e19b3aff10f8651352413976f89e 99 SMART SM01152 10 86 1.3E-34 T 14-10-2018 IPR003746 Protein of unknown function DUF167 C3497_02165 4e10e19b3aff10f8651352413976f89e 99 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 14 85 5.1E-24 T 14-10-2018 IPR003746 Protein of unknown function DUF167 C3497_02165 4e10e19b3aff10f8651352413976f89e 99 SUPERFAMILY SSF69786 4 90 1.83E-26 T 14-10-2018 IPR036591 YggU-like superfamily C3497_02165 4e10e19b3aff10f8651352413976f89e 99 Hamap MF_00634 UPF0235 protein YggU [yggU]. 10 98 20.243 T 14-10-2018 IPR003746 Protein of unknown function DUF167 C3497_02165 4e10e19b3aff10f8651352413976f89e 99 Gene3D G3DSA:3.30.1200.10 5 97 1.2E-27 T 14-10-2018 IPR036591 YggU-like superfamily C3497_00255 005c591b101711027e44b78413643ec4 146 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 145 20.572 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 C3497_00255 005c591b101711027e44b78413643ec4 146 Pfam PF02623 FliW protein 19 138 1.9E-30 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 C3497_00255 005c591b101711027e44b78413643ec4 146 Gene3D G3DSA:2.30.290.10 1 145 1.1E-40 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily C3497_00255 005c591b101711027e44b78413643ec4 146 SUPERFAMILY SSF141457 1 141 2.88E-36 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily C3497_11840 a3333b20dc2a50ea3fd6ab1faea633be 257 Pfam PF09955 Predicted integral membrane protein (DUF2189) 69 191 1.8E-37 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 C3497_10460 2e796e0ff3a94cc028b716b9fbb1966a 346 Pfam PF13480 Acetyltransferase (GNAT) domain 170 282 6.3E-15 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 C3497_10460 2e796e0ff3a94cc028b716b9fbb1966a 346 Gene3D G3DSA:3.40.630.30 137 291 1.3E-16 T 14-10-2018 C3497_10460 2e796e0ff3a94cc028b716b9fbb1966a 346 SUPERFAMILY SSF55729 13 117 7.77E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_10460 2e796e0ff3a94cc028b716b9fbb1966a 346 Gene3D G3DSA:3.40.630.30 18 136 1.3E-16 T 14-10-2018 C3497_10460 2e796e0ff3a94cc028b716b9fbb1966a 346 SUPERFAMILY SSF55729 153 314 1.01E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_10460 2e796e0ff3a94cc028b716b9fbb1966a 346 TIGRFAM TIGR03019 pepcterm_femAB: FemAB-related protein, PEP-CTERM system-associated 17 346 2.6E-152 T 14-10-2018 IPR017469 PEP-CTERM system-associated, FemAB-related C3497_01855 8c174ef02ef6bdd7476bbe29921623c7 103 SUPERFAMILY SSF54999 5 102 3.4E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily C3497_01855 8c174ef02ef6bdd7476bbe29921623c7 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.2E-44 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01855 8c174ef02ef6bdd7476bbe29921623c7 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.4E-33 T 14-10-2018 IPR027486 Ribosomal protein S10 domain C3497_01855 8c174ef02ef6bdd7476bbe29921623c7 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01855 8c174ef02ef6bdd7476bbe29921623c7 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.68 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01855 8c174ef02ef6bdd7476bbe29921623c7 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.7E-16 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01855 8c174ef02ef6bdd7476bbe29921623c7 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.7E-16 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01855 8c174ef02ef6bdd7476bbe29921623c7 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.7E-16 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01855 8c174ef02ef6bdd7476bbe29921623c7 103 SMART SM01403 7 101 2.1E-53 T 14-10-2018 IPR027486 Ribosomal protein S10 domain C3497_01855 8c174ef02ef6bdd7476bbe29921623c7 103 Gene3D G3DSA:3.30.70.600 1 102 5.8E-35 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 648 3.2E-215 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 Gene3D G3DSA:1.10.290.10 280 409 1.5E-144 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 SUPERFAMILY SSF57783 613 652 8.5E-12 T 14-10-2018 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 Pfam PF01131 DNA topoisomerase 152 590 5.1E-110 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 Gene3D G3DSA:2.70.20.10 211 486 1.5E-144 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 SMART SM00437 271 556 4.7E-61 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 Gene3D G3DSA:1.10.460.10 156 600 1.5E-144 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 Pfam PF01751 Toprim domain 3 129 4.1E-15 T 14-10-2018 IPR006171 TOPRIM domain C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 SUPERFAMILY SSF56712 1 604 8.76E-176 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 5.5E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 5.5E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 5.5E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 5.5E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 5.5E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 Gene3D G3DSA:3.40.50.140 1 149 1.5E-50 T 14-10-2018 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 619 652 8.1E-13 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 SMART SM00493 1 122 1.3E-21 T 14-10-2018 IPR006171 TOPRIM domain C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 Gene3D G3DSA:3.30.65.10 609 656 8.4E-7 T 14-10-2018 C3497_10885 daa0acda7e53111a3e4f2f5ea17537d9 671 SMART SM00436 122 217 2.8E-34 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 C3497_12905 2741e0235655e7117fc4ad45446b249d 120 Pfam PF08241 Methyltransferase domain 3 93 1.3E-15 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C3497_12905 2741e0235655e7117fc4ad45446b249d 120 SUPERFAMILY SSF53335 3 114 9.6E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_12905 2741e0235655e7117fc4ad45446b249d 120 Gene3D G3DSA:3.40.50.150 2 113 1.7E-18 T 14-10-2018 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 SUPERFAMILY SSF82829 240 316 7.85E-9 T 14-10-2018 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 Pfam PF01171 PP-loop family 26 199 2.8E-46 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 25 203 1.5E-46 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 Pfam PF11734 TilS substrate C-terminal domain 365 430 4.3E-18 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 SUPERFAMILY SSF56037 321 436 8.37E-24 T 14-10-2018 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 366 403 3.3E-7 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 SMART SM00977 362 434 1.5E-17 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 10 305 21.833 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 Pfam PF09179 TilS substrate binding domain 249 313 1.1E-5 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 SUPERFAMILY SSF52402 23 231 2.71E-53 T 14-10-2018 C3497_02750 4597a4f24e912d2ee9204aed8aeba19c 440 Gene3D G3DSA:3.40.50.620 17 233 7.5E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_13620 137006ff70e9c0d0e023647556d6e5a9 618 SMART SM00563 455 571 2.4E-14 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3497_13620 137006ff70e9c0d0e023647556d6e5a9 618 Gene3D G3DSA:1.20.1250.20 5 422 1.3E-30 T 14-10-2018 C3497_13620 137006ff70e9c0d0e023647556d6e5a9 618 Pfam PF07690 Major Facilitator Superfamily 17 381 5.8E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_13620 137006ff70e9c0d0e023647556d6e5a9 618 SUPERFAMILY SSF69593 417 605 2.09E-14 T 14-10-2018 C3497_13620 137006ff70e9c0d0e023647556d6e5a9 618 Pfam PF01553 Acyltransferase 441 568 1.1E-9 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3497_13620 137006ff70e9c0d0e023647556d6e5a9 618 SUPERFAMILY SSF103473 11 423 8.63E-30 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_02180 ea89cd23bc762dae1271cdce727ce3c7 425 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 22 422 1.2E-90 T 14-10-2018 C3497_02180 ea89cd23bc762dae1271cdce727ce3c7 425 Gene3D G3DSA:3.20.20.140 57 369 7.3E-112 T 14-10-2018 C3497_02180 ea89cd23bc762dae1271cdce727ce3c7 425 SUPERFAMILY SSF51338 1 423 5.37E-29 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3497_02180 ea89cd23bc762dae1271cdce727ce3c7 425 Gene3D G3DSA:2.30.40.10 9 421 7.3E-112 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3497_02180 ea89cd23bc762dae1271cdce727ce3c7 425 Pfam PF01979 Amidohydrolase family 52 421 2.2E-15 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C3497_02180 ea89cd23bc762dae1271cdce727ce3c7 425 SUPERFAMILY SSF51556 56 367 1.1E-83 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3497_02985 f808b03f274d4566f1bf55e6d60f99ca 161 SUPERFAMILY SSF47188 1 122 1.96E-24 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C3497_02985 f808b03f274d4566f1bf55e6d60f99ca 161 Pfam PF01814 Hemerythrin HHE cation binding domain 14 115 5.8E-8 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C3497_02985 f808b03f274d4566f1bf55e6d60f99ca 161 Gene3D G3DSA:1.20.120.50 3 123 8.9E-21 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C3497_02985 f808b03f274d4566f1bf55e6d60f99ca 161 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 119 2.6E-20 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 C3497_14545 3732f7e2b7214483d384c98ec5049e57 403 SUPERFAMILY SSF53955 17 327 1.24E-97 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_14545 3732f7e2b7214483d384c98ec5049e57 403 Gene3D G3DSA:1.10.530.10 73 321 2.0E-81 T 14-10-2018 C3497_14545 3732f7e2b7214483d384c98ec5049e57 403 SUPERFAMILY SSF47090 331 400 3.14E-17 T 14-10-2018 IPR036365 PGBD-like superfamily C3497_14545 3732f7e2b7214483d384c98ec5049e57 403 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 31 326 1.7E-110 T 14-10-2018 IPR011970 Lytic murein transglycosylase C3497_14545 3732f7e2b7214483d384c98ec5049e57 403 Gene3D G3DSA:1.10.101.10 335 402 6.4E-12 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 C3497_14545 3732f7e2b7214483d384c98ec5049e57 403 Pfam PF01471 Putative peptidoglycan binding domain 344 399 2.1E-11 T 14-10-2018 IPR002477 Peptidoglycan binding-like C3497_14545 3732f7e2b7214483d384c98ec5049e57 403 Pfam PF13406 Transglycosylase SLT domain 31 322 5.7E-103 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 C3497_14545 3732f7e2b7214483d384c98ec5049e57 403 Gene3D G3DSA:1.10.8.350 41 206 2.0E-81 T 14-10-2018 C3497_05420 12ba41964fea9db4532e12b5018f7a64 322 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_05420 12ba41964fea9db4532e12b5018f7a64 322 Pfam PF01479 S4 domain 22 68 5.7E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_05420 12ba41964fea9db4532e12b5018f7a64 322 Gene3D G3DSA:3.10.290.10 11 73 6.3E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3497_05420 12ba41964fea9db4532e12b5018f7a64 322 Gene3D G3DSA:3.30.2350.10 91 313 1.9E-75 T 14-10-2018 C3497_05420 12ba41964fea9db4532e12b5018f7a64 322 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 310 4.5E-80 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_05420 12ba41964fea9db4532e12b5018f7a64 322 Pfam PF00849 RNA pseudouridylate synthase 99 247 2.1E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_05420 12ba41964fea9db4532e12b5018f7a64 322 SUPERFAMILY SSF55120 88 312 1.38E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_05420 12ba41964fea9db4532e12b5018f7a64 322 SMART SM00363 22 80 3.1E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_05420 12ba41964fea9db4532e12b5018f7a64 322 SUPERFAMILY SSF55174 21 72 1.15E-8 T 14-10-2018 C3497_11240 584a5b5fcec9f4325b185dc699bce127 611 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 468 590 1.5E-48 T 14-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal C3497_11240 584a5b5fcec9f4325b185dc699bce127 611 Gene3D G3DSA:2.40.10.200 485 586 9.8E-26 T 14-10-2018 C3497_11240 584a5b5fcec9f4325b185dc699bce127 611 Pfam PF07514 Putative helicase 28 340 4.3E-128 T 14-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative C3497_11240 584a5b5fcec9f4325b185dc699bce127 611 Gene3D G3DSA:1.10.3210.40 32 250 6.9E-39 T 14-10-2018 C3497_11240 584a5b5fcec9f4325b185dc699bce127 611 Gene3D G3DSA:1.10.10.10 469 539 9.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_11240 584a5b5fcec9f4325b185dc699bce127 611 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 26 243 5.6E-92 T 14-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class C3497_11240 584a5b5fcec9f4325b185dc699bce127 611 SUPERFAMILY SSF46785 466 591 1.06E-41 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_07880 2217c9c71c4ebe07735e80b4519840ec 256 SUPERFAMILY SSF161098 57 238 3.27E-27 T 14-10-2018 IPR035906 MetI-like superfamily C3497_07880 2217c9c71c4ebe07735e80b4519840ec 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 239 4.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_07880 2217c9c71c4ebe07735e80b4519840ec 256 Gene3D G3DSA:1.10.3720.10 52 252 2.2E-20 T 14-10-2018 IPR035906 MetI-like superfamily C3497_11305 613883a66af2dc082bd52c84f16f6c35 231 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 204 1.2E-88 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C3497_11305 613883a66af2dc082bd52c84f16f6c35 231 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 207 1.8E-91 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C3497_11305 613883a66af2dc082bd52c84f16f6c35 231 PIRSF PIRSF001461 1 231 1.7E-97 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C3497_11305 613883a66af2dc082bd52c84f16f6c35 231 SUPERFAMILY SSF51366 1 211 3.57E-71 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3497_11305 613883a66af2dc082bd52c84f16f6c35 231 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C3497_11305 613883a66af2dc082bd52c84f16f6c35 231 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C3497_11305 613883a66af2dc082bd52c84f16f6c35 231 Gene3D G3DSA:3.20.20.70 1 218 2.1E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_08340 7991be78a0c30b4785c2cb0a8f91d315 194 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 190 2.6E-83 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 C3497_08340 7991be78a0c30b4785c2cb0a8f91d315 194 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.377 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 C3497_08340 7991be78a0c30b4785c2cb0a8f91d315 194 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 190 1.4E-60 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_08340 7991be78a0c30b4785c2cb0a8f91d315 194 PIRSF PIRSF006102 1 193 2.6E-58 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_01860 787ce306e9d8386a6e8239d0a81c3f01 214 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 39.498 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01860 787ce306e9d8386a6e8239d0a81c3f01 214 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 1.6E-87 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01860 787ce306e9d8386a6e8239d0a81c3f01 214 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site C3497_01860 787ce306e9d8386a6e8239d0a81c3f01 214 Pfam PF00297 Ribosomal protein L3 58 185 3.9E-17 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01860 787ce306e9d8386a6e8239d0a81c3f01 214 Gene3D G3DSA:2.40.30.10 134 213 4.0E-15 T 14-10-2018 C3497_01860 787ce306e9d8386a6e8239d0a81c3f01 214 Gene3D G3DSA:2.40.50.620 32 97 4.4E-15 T 14-10-2018 C3497_01860 787ce306e9d8386a6e8239d0a81c3f01 214 SUPERFAMILY SSF50447 2 211 1.15E-79 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_07315 8653bbdf804f1af8d0e022e9616d84c7 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 46 2.0E-11 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_07315 8653bbdf804f1af8d0e022e9616d84c7 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 7.1E-10 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_07315 8653bbdf804f1af8d0e022e9616d84c7 256 Gene3D G3DSA:2.160.10.10 1 188 8.9E-56 T 14-10-2018 C3497_07315 8653bbdf804f1af8d0e022e9616d84c7 256 SUPERFAMILY SSF51161 1 256 1.18E-80 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3497_07315 8653bbdf804f1af8d0e022e9616d84c7 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 45.229 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 C3497_07315 8653bbdf804f1af8d0e022e9616d84c7 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 4.7E-29 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 C3497_07315 8653bbdf804f1af8d0e022e9616d84c7 256 Gene3D G3DSA:1.20.1180.10 191 256 2.9E-25 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 C3497_07315 8653bbdf804f1af8d0e022e9616d84c7 256 PIRSF PIRSF000456 1 256 3.6E-105 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 C3497_07315 8653bbdf804f1af8d0e022e9616d84c7 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 255 3.0E-105 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 Gene3D G3DSA:3.40.50.620 1 308 2.9E-137 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_04155 80d9488bce16c694aadee598b9a17e76 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 5.8E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 5.8E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 194 212 5.8E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 246 5.8E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 Gene3D G3DSA:1.20.120.640 309 461 8.9E-43 T 14-10-2018 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 SMART SM00840 347 402 1.0E-24 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 1.6E-175 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.404 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 SUPERFAMILY SSF52374 2 316 1.15E-103 T 14-10-2018 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 SUPERFAMILY SSF47323 319 460 3.27E-38 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 316 3.8E-132 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 C3497_04155 80d9488bce16c694aadee598b9a17e76 461 Pfam PF09190 DALR domain 347 402 6.5E-19 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 C3497_08940 27c07df1c7a5d27a779d60a2b3b4117e 530 Pfam PF02239 Cytochrome D1 heme domain 145 521 1.5E-100 T 14-10-2018 C3497_08940 27c07df1c7a5d27a779d60a2b3b4117e 530 SUPERFAMILY SSF51004 118 523 3.27E-78 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily C3497_08940 27c07df1c7a5d27a779d60a2b3b4117e 530 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 108 5.0E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_08940 27c07df1c7a5d27a779d60a2b3b4117e 530 SUPERFAMILY SSF46626 12 111 3.15E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08940 27c07df1c7a5d27a779d60a2b3b4117e 530 Gene3D G3DSA:1.10.760.10 20 111 3.2E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08940 27c07df1c7a5d27a779d60a2b3b4117e 530 Gene3D G3DSA:2.140.10.20 116 524 4.8E-109 T 14-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily C3497_05430 970f9ee8a3418fd6d6b2ca82a460cfe2 238 Gene3D G3DSA:3.40.1010.10 5 124 1.0E-36 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3497_05430 970f9ee8a3418fd6d6b2ca82a460cfe2 238 SUPERFAMILY SSF53790 6 236 7.72E-63 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3497_05430 970f9ee8a3418fd6d6b2ca82a460cfe2 238 Gene3D G3DSA:3.30.950.10 125 238 1.5E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3497_05430 970f9ee8a3418fd6d6b2ca82a460cfe2 238 PIRSF PIRSF005917 1 230 1.0E-47 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 Gene3D G3DSA:3.90.1570.50 3 238 7.5E-70 T 14-10-2018 C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 Gene3D G3DSA:3.40.50.300 447 702 2.0E-78 T 14-10-2018 C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 188 2.3E-31 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 6 699 1.2E-119 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 SMART SM00487 244 446 1.3E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 706 975 2.4E-60 T 14-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 SUPERFAMILY SSF52540 247 421 1.98E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 Pfam PF04851 Type III restriction enzyme, res subunit 247 415 2.5E-36 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 Gene3D G3DSA:1.20.58.910 703 800 3.4E-6 T 14-10-2018 C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 Gene3D G3DSA:3.90.640.50 29 96 7.5E-70 T 14-10-2018 C3497_02475 06ac57b4a654f1752b61d007edcbb815 992 Gene3D G3DSA:3.40.50.300 247 446 1.7E-63 T 14-10-2018 C3497_09975 afe5c997d8f763a041c3252ba8dbfc07 577 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 88 255 2.2E-59 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 C3497_09975 afe5c997d8f763a041c3252ba8dbfc07 577 Gene3D G3DSA:3.40.50.1820 210 497 1.8E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_09975 afe5c997d8f763a041c3252ba8dbfc07 577 SUPERFAMILY SSF53474 198 500 1.89E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_01195 4c7d00a3c7433e20143c4e5bf1a7b43c 326 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 C3497_01195 4c7d00a3c7433e20143c4e5bf1a7b43c 326 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 314 4.0E-138 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 C3497_01195 4c7d00a3c7433e20143c4e5bf1a7b43c 326 Gene3D G3DSA:3.40.50.1100 46 148 5.8E-124 T 14-10-2018 C3497_01195 4c7d00a3c7433e20143c4e5bf1a7b43c 326 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 303 2.0E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3497_01195 4c7d00a3c7433e20143c4e5bf1a7b43c 326 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 314 1.7E-132 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 C3497_01195 4c7d00a3c7433e20143c4e5bf1a7b43c 326 Gene3D G3DSA:3.40.50.1100 12 309 5.8E-124 T 14-10-2018 C3497_01195 4c7d00a3c7433e20143c4e5bf1a7b43c 326 SUPERFAMILY SSF53686 5 314 1.05E-98 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3497_02770 6b64c2ec0ffd41f30d61580372b366fb 373 SUPERFAMILY SSF102114 101 314 1.24E-12 T 14-10-2018 C3497_02770 6b64c2ec0ffd41f30d61580372b366fb 373 PIRSF PIRSF006004 1 370 2.6E-154 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 C3497_02770 6b64c2ec0ffd41f30d61580372b366fb 373 Gene3D G3DSA:3.20.20.70 63 342 1.8E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_02770 6b64c2ec0ffd41f30d61580372b366fb 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 362 2.4E-134 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 C3497_02770 6b64c2ec0ffd41f30d61580372b366fb 373 Gene3D G3DSA:1.10.150.530 1 62 2.4E-22 T 14-10-2018 C3497_02770 6b64c2ec0ffd41f30d61580372b366fb 373 Pfam PF04055 Radical SAM superfamily 105 284 2.9E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_02770 6b64c2ec0ffd41f30d61580372b366fb 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 357 75.585 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 C3497_03565 9012e819e73a821b99f6a78d87f3f282 331 SMART SM00876 238 330 1.8E-50 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3497_03565 9012e819e73a821b99f6a78d87f3f282 331 Pfam PF04055 Radical SAM superfamily 68 222 9.6E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_03565 9012e819e73a821b99f6a78d87f3f282 331 Gene3D G3DSA:3.20.20.70 22 331 9.6E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_03565 9012e819e73a821b99f6a78d87f3f282 331 Hamap MF_01694 Biotin synthase [bioB]. 23 331 42.357 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3497_03565 9012e819e73a821b99f6a78d87f3f282 331 TIGRFAM TIGR00433 bioB: biotin synthase 32 329 9.4E-123 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3497_03565 9012e819e73a821b99f6a78d87f3f282 331 SMART SM00729 61 267 5.3E-43 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3497_03565 9012e819e73a821b99f6a78d87f3f282 331 SUPERFAMILY SSF102114 24 329 4.45E-92 T 14-10-2018 C3497_03565 9012e819e73a821b99f6a78d87f3f282 331 PIRSF PIRSF001619 8 331 6.8E-132 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3497_03565 9012e819e73a821b99f6a78d87f3f282 331 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 238 329 2.6E-21 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3497_06360 45d1ceeade17acc4d9817d0af970592f 827 Gene3D G3DSA:3.30.1490.270 354 413 4.6E-8 T 14-10-2018 C3497_06360 45d1ceeade17acc4d9817d0af970592f 827 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 507 814 4.9E-71 T 14-10-2018 IPR007296 Domain of unknown function DUF403 C3497_06360 45d1ceeade17acc4d9817d0af970592f 827 Gene3D G3DSA:3.40.50.11290 220 317 5.4E-43 T 14-10-2018 C3497_06360 45d1ceeade17acc4d9817d0af970592f 827 SUPERFAMILY SSF56059 25 421 1.73E-23 T 14-10-2018 C3497_06360 45d1ceeade17acc4d9817d0af970592f 827 Pfam PF14403 Circularly permuted ATP-grasp type 2 82 457 1.6E-159 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 C3497_11490 01ce5e0887d840b67e6a408990479d23 173 SUPERFAMILY SSF56784 9 168 2.03E-39 T 14-10-2018 IPR036412 HAD-like superfamily C3497_11490 01ce5e0887d840b67e6a408990479d23 173 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 10 161 5.0E-47 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3497_11490 01ce5e0887d840b67e6a408990479d23 173 Gene3D G3DSA:3.40.50.1000 6 171 7.8E-49 T 14-10-2018 IPR023214 HAD superfamily C3497_11490 01ce5e0887d840b67e6a408990479d23 173 PIRSF PIRSF006118 2 172 1.1E-62 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 Gene3D G3DSA:3.40.50.261 133 297 1.5E-67 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 PIRSF PIRSF001553 1 297 7.5E-115 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 Pfam PF00549 CoA-ligase 160 271 7.3E-15 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 245 258 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 SUPERFAMILY SSF51735 1 116 9.85E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 PRINTS PR01798 Succinyl-CoA synthase signature 249 266 1.4E-32 T 14-10-2018 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 PRINTS PR01798 Succinyl-CoA synthase signature 217 230 1.4E-32 T 14-10-2018 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 1.4E-32 T 14-10-2018 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 PRINTS PR01798 Succinyl-CoA synthase signature 186 204 1.4E-32 T 14-10-2018 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 SMART SM00881 4 103 4.6E-30 T 14-10-2018 IPR003781 CoA-binding GO:0048037 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 Gene3D G3DSA:3.40.50.720 2 132 3.5E-41 T 14-10-2018 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 297 39.929 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 Pfam PF02629 CoA binding domain 6 102 2.3E-22 T 14-10-2018 IPR003781 CoA-binding GO:0048037 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 161 190 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 297 1.1E-126 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3497_11330 97177f268cca74f24bf7e81a922c77e6 297 SUPERFAMILY SSF52210 132 296 1.96E-52 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3497_07515 2ecb3c30b3cfd4d0ef4a3e5e0a5a8fdc 62 Pfam PF10049 Protein of unknown function (DUF2283) 2 50 5.9E-16 T 14-10-2018 IPR019270 Protein of unknown function DUF2283 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 Gene3D G3DSA:3.40.50.1260 8 388 2.6E-145 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 PIRSF PIRSF000724 1 393 6.4E-137 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 SUPERFAMILY SSF53748 3 389 4.59E-141 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 Gene3D G3DSA:3.40.50.1260 167 380 2.6E-145 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 Pfam PF00162 Phosphoglycerate kinase 7 380 5.3E-139 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 390 38.699 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 PRINTS PR00477 Phosphoglycerate kinase family signature 188 207 9.8E-84 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 PRINTS PR00477 Phosphoglycerate kinase family signature 106 121 9.8E-84 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 9.8E-84 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 9.8E-84 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 PRINTS PR00477 Phosphoglycerate kinase family signature 165 187 9.8E-84 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 PRINTS PR00477 Phosphoglycerate kinase family signature 343 354 9.8E-84 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 PRINTS PR00477 Phosphoglycerate kinase family signature 366 383 9.8E-84 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 PRINTS PR00477 Phosphoglycerate kinase family signature 134 156 9.8E-84 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03450 6512a7296fa7a0f236dfbb288aa3d07a 394 PRINTS PR00477 Phosphoglycerate kinase family signature 310 335 9.8E-84 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_14190 5ea0f3dd2958cab8c9fccaaff2dedabc 203 SUPERFAMILY SSF56784 2 199 2.48E-42 T 14-10-2018 IPR036412 HAD-like superfamily C3497_14190 5ea0f3dd2958cab8c9fccaaff2dedabc 203 Pfam PF00702 haloacid dehalogenase-like hydrolase 69 163 3.8E-11 T 14-10-2018 C3497_14190 5ea0f3dd2958cab8c9fccaaff2dedabc 203 Gene3D G3DSA:3.90.1470.10 13 128 3.5E-76 T 14-10-2018 C3497_14190 5ea0f3dd2958cab8c9fccaaff2dedabc 203 Gene3D G3DSA:3.40.50.1000 3 191 3.5E-76 T 14-10-2018 IPR023214 HAD superfamily C3497_14190 5ea0f3dd2958cab8c9fccaaff2dedabc 203 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 2 196 8.9E-88 T 14-10-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 C3497_01675 e1bbddacb126f9080168f5ed37454e17 327 Pfam PF12833 Helix-turn-helix domain 248 326 3.7E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3497_01675 e1bbddacb126f9080168f5ed37454e17 327 SMART SM00342 242 324 1.5E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3497_01675 e1bbddacb126f9080168f5ed37454e17 327 Gene3D G3DSA:1.10.10.60 222 327 1.2E-23 T 14-10-2018 C3497_01675 e1bbddacb126f9080168f5ed37454e17 327 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 15 199 1.5E-36 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal C3497_01675 e1bbddacb126f9080168f5ed37454e17 327 SUPERFAMILY SSF46689 277 326 2.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_05570 64ec0fa2d0304c8f8509ac2f4abdfe74 195 Gene3D G3DSA:1.20.120.1760 4 180 5.3E-13 T 14-10-2018 C3497_05570 64ec0fa2d0304c8f8509ac2f4abdfe74 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C3497_05570 64ec0fa2d0304c8f8509ac2f4abdfe74 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 181 7.3E-54 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 C3497_05570 64ec0fa2d0304c8f8509ac2f4abdfe74 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 6.1E-16 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C3497_05570 64ec0fa2d0304c8f8509ac2f4abdfe74 195 PIRSF PIRSF000847 1 194 6.7E-48 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 C3497_09190 8e7a4fef79ffad4fe9b18eff2c896501 257 Pfam PF07317 Flagellar regulator YcgR 20 126 6.6E-29 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal C3497_09190 8e7a4fef79ffad4fe9b18eff2c896501 257 Gene3D G3DSA:2.40.10.220 129 249 8.5E-26 T 14-10-2018 C3497_09190 8e7a4fef79ffad4fe9b18eff2c896501 257 Gene3D G3DSA:2.30.110.10 19 128 1.1E-6 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 C3497_09190 8e7a4fef79ffad4fe9b18eff2c896501 257 Pfam PF07238 PilZ domain 128 245 2.5E-15 T 14-10-2018 IPR009875 PilZ domain GO:0035438 C3497_09190 8e7a4fef79ffad4fe9b18eff2c896501 257 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 15 254 32.338 T 14-10-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 C3497_08670 d2d8656fd093ccda05c8da276ff27a9b 197 Gene3D G3DSA:2.102.10.10 40 189 8.6E-45 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3497_08670 d2d8656fd093ccda05c8da276ff27a9b 197 SUPERFAMILY SSF50022 27 191 3.84E-39 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3497_08670 d2d8656fd093ccda05c8da276ff27a9b 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 6 37 7.7E-9 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 C3497_08670 d2d8656fd093ccda05c8da276ff27a9b 197 Pfam PF00355 Rieske [2Fe-2S] domain 50 176 6.6E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 C3497_08670 d2d8656fd093ccda05c8da276ff27a9b 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 8 189 9.2E-62 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 C3497_08670 d2d8656fd093ccda05c8da276ff27a9b 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 161 173 6.4E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 C3497_08670 d2d8656fd093ccda05c8da276ff27a9b 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 116 127 6.4E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 C3497_08670 d2d8656fd093ccda05c8da276ff27a9b 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 148 160 6.4E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 C3497_06420 be8cdac2fb63357ab05587cdb0874c80 485 Pfam PF13007 Transposase C of IS166 homeodomain 12 77 1.5E-10 T 14-10-2018 IPR024463 Transposase TnpC, homeodomain C3497_06420 be8cdac2fb63357ab05587cdb0874c80 485 Pfam PF03050 Transposase IS66 family 144 435 2.1E-90 T 14-10-2018 IPR004291 Transposase, IS66 C3497_06420 be8cdac2fb63357ab05587cdb0874c80 485 Pfam PF13005 zinc-finger binding domain of transposase IS66 92 123 7.3E-9 T 14-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 C3497_06420 be8cdac2fb63357ab05587cdb0874c80 485 Pfam PF13817 IS66 C-terminal element 442 478 1.7E-17 T 14-10-2018 IPR039552 Transposase IS66, C-terminal C3497_00340 f28d4eae620ee21d22fe4e2aaccdd852 353 SUPERFAMILY SSF53067 9 173 5.83E-15 T 14-10-2018 C3497_00340 f28d4eae620ee21d22fe4e2aaccdd852 353 Gene3D G3DSA:3.30.1490.300 86 145 2.3E-91 T 14-10-2018 C3497_00340 f28d4eae620ee21d22fe4e2aaccdd852 353 SUPERFAMILY SSF53067 189 349 2.52E-27 T 14-10-2018 C3497_00340 f28d4eae620ee21d22fe4e2aaccdd852 353 Pfam PF11104 Type IV pilus assembly protein PilM; 11 351 3.9E-149 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM C3497_00340 f28d4eae620ee21d22fe4e2aaccdd852 353 SMART SM00842 9 177 4.4E-5 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 C3497_00340 f28d4eae620ee21d22fe4e2aaccdd852 353 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 351 1.6E-103 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM C3497_00340 f28d4eae620ee21d22fe4e2aaccdd852 353 Gene3D G3DSA:3.30.420.40 11 349 2.3E-91 T 14-10-2018 C3497_00340 f28d4eae620ee21d22fe4e2aaccdd852 353 PIRSF PIRSF019169 1 352 5.7E-132 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM C3497_00340 f28d4eae620ee21d22fe4e2aaccdd852 353 Gene3D G3DSA:3.30.420.40 188 315 2.3E-91 T 14-10-2018 C3497_05625 f5ad61829ca53ece4f318452c1fe8dd9 286 Pfam PF08668 HDOD domain 27 212 5.8E-32 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_05625 f5ad61829ca53ece4f318452c1fe8dd9 286 SUPERFAMILY SSF109604 17 244 3.07E-40 T 14-10-2018 C3497_05625 f5ad61829ca53ece4f318452c1fe8dd9 286 Gene3D G3DSA:1.10.3210.10 6 248 1.1E-41 T 14-10-2018 C3497_00420 a55bfcad75f2811f54bb1b5dc1315fb1 152 Gene3D G3DSA:3.40.630.30 2 143 2.3E-18 T 14-10-2018 C3497_00420 a55bfcad75f2811f54bb1b5dc1315fb1 152 Pfam PF00583 Acetyltransferase (GNAT) family 46 133 3.1E-9 T 14-10-2018 IPR000182 GNAT domain C3497_00420 a55bfcad75f2811f54bb1b5dc1315fb1 152 SUPERFAMILY SSF55729 6 137 1.06E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_04335 1286ca153d26848c178a8463f3d9349a 589 Pfam PF02374 Anion-transporting ATPase 481 587 2.5E-10 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 C3497_04335 1286ca153d26848c178a8463f3d9349a 589 Pfam PF02374 Anion-transporting ATPase 331 478 3.2E-29 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 C3497_04335 1286ca153d26848c178a8463f3d9349a 589 Pfam PF02374 Anion-transporting ATPase 10 292 1.3E-74 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 C3497_04335 1286ca153d26848c178a8463f3d9349a 589 SUPERFAMILY SSF52540 316 581 9.05E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04335 1286ca153d26848c178a8463f3d9349a 589 SMART SM00382 7 226 0.0062 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_04335 1286ca153d26848c178a8463f3d9349a 589 SMART SM00382 328 525 0.013 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_04335 1286ca153d26848c178a8463f3d9349a 589 SUPERFAMILY SSF52540 5 260 5.93E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04335 1286ca153d26848c178a8463f3d9349a 589 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 292 9.5E-79 T 14-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 C3497_04335 1286ca153d26848c178a8463f3d9349a 589 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 7 576 3.3E-273 T 14-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 C3497_04335 1286ca153d26848c178a8463f3d9349a 589 Gene3D G3DSA:3.40.50.300 1 295 3.3E-85 T 14-10-2018 C3497_04335 1286ca153d26848c178a8463f3d9349a 589 PIRSF PIRSF001327 1 589 1.4E-259 T 14-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 C3497_04335 1286ca153d26848c178a8463f3d9349a 589 Gene3D G3DSA:3.40.50.300 312 587 7.8E-70 T 14-10-2018 C3497_08570 4b9fd5ad556fc6cd5b83bf6543e87b0f 62 Gene3D G3DSA:3.30.920.30 1 60 1.1E-24 T 14-10-2018 IPR038570 HicA superfamily C3497_08570 4b9fd5ad556fc6cd5b83bf6543e87b0f 62 SUPERFAMILY SSF54786 1 61 3.73E-16 T 14-10-2018 C3497_08570 4b9fd5ad556fc6cd5b83bf6543e87b0f 62 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 6 60 1.4E-19 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 C3497_03255 f61810f64dc4ca78decbe245aa279a2d 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 7.2E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_03255 f61810f64dc4ca78decbe245aa279a2d 215 Gene3D G3DSA:1.10.357.10 6 210 3.9E-42 T 14-10-2018 C3497_03255 f61810f64dc4ca78decbe245aa279a2d 215 SUPERFAMILY SSF46689 19 78 2.14E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_03255 f61810f64dc4ca78decbe245aa279a2d 215 SUPERFAMILY SSF48498 91 189 1.0E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C3497_03255 f61810f64dc4ca78decbe245aa279a2d 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 4.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_03255 f61810f64dc4ca78decbe245aa279a2d 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 4.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_13590 7f09c5aaed1e73a2e2e077c0dabdfa24 546 SMART SM00283 284 545 5.1E-82 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_13590 7f09c5aaed1e73a2e2e077c0dabdfa24 546 Gene3D G3DSA:1.10.287.950 228 546 1.2E-70 T 14-10-2018 C3497_13590 7f09c5aaed1e73a2e2e077c0dabdfa24 546 Gene3D G3DSA:3.30.450.20 33 193 1.0E-45 T 14-10-2018 C3497_13590 7f09c5aaed1e73a2e2e077c0dabdfa24 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 512 2.1E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_13590 7f09c5aaed1e73a2e2e077c0dabdfa24 546 SUPERFAMILY SSF58104 253 546 1.7E-71 T 14-10-2018 C3497_13590 7f09c5aaed1e73a2e2e077c0dabdfa24 546 Pfam PF17200 Single Cache domain 2 37 191 9.8E-39 T 14-10-2018 IPR033480 Single Cache domain 2 C3497_13590 7f09c5aaed1e73a2e2e077c0dabdfa24 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 1.6E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_13590 7f09c5aaed1e73a2e2e077c0dabdfa24 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 1.6E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_13590 7f09c5aaed1e73a2e2e077c0dabdfa24 546 SMART SM01049 34 133 1.8E-26 T 14-10-2018 IPR033480 Single Cache domain 2 C3497_13570 cc7f1844382b7d3cdfd83cb4d1bbdeef 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 222 1.8E-65 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 C3497_13570 cc7f1844382b7d3cdfd83cb4d1bbdeef 229 Gene3D G3DSA:1.10.3720.10 4 224 7.9E-49 T 14-10-2018 IPR035906 MetI-like superfamily C3497_13570 cc7f1844382b7d3cdfd83cb4d1bbdeef 229 SUPERFAMILY SSF161098 6 217 6.28E-41 T 14-10-2018 IPR035906 MetI-like superfamily C3497_13570 cc7f1844382b7d3cdfd83cb4d1bbdeef 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 223 8.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_12720 63ddbeb1acc7ea9b034f5a05dcccedef 234 SUPERFAMILY SSF53955 103 227 1.09E-25 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_12720 63ddbeb1acc7ea9b034f5a05dcccedef 234 Gene3D G3DSA:1.10.530.10 92 220 1.5E-24 T 14-10-2018 C3497_12720 63ddbeb1acc7ea9b034f5a05dcccedef 234 Pfam PF01464 Transglycosylase SLT domain 112 200 1.6E-16 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 SUPERFAMILY SSF53720 31 432 2.55E-86 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 37 431 2.6E-159 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 234 266 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 Gene3D G3DSA:3.40.50.1980 238 354 1.7E-129 T 14-10-2018 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 PRINTS PR00083 Histidinol dehydrogenase signature 175 201 1.2E-82 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 1.2E-82 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 PRINTS PR00083 Histidinol dehydrogenase signature 205 230 1.2E-82 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 PRINTS PR00083 Histidinol dehydrogenase signature 141 167 1.2E-82 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 PRINTS PR00083 Histidinol dehydrogenase signature 234 255 1.2E-82 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 PRINTS PR00083 Histidinol dehydrogenase signature 325 350 1.2E-82 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 PRINTS PR00083 Histidinol dehydrogenase signature 256 275 1.2E-82 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 PRINTS PR00083 Histidinol dehydrogenase signature 366 384 1.2E-82 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 Pfam PF00815 Histidinol dehydrogenase 28 432 7.2E-167 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 432 40.63 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 PIRSF PIRSF000099 5 434 1.6E-157 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3497_11415 3ca1f7b32503784a4aaf0ab9dfde1aa0 434 Gene3D G3DSA:3.40.50.1980 34 236 1.7E-129 T 14-10-2018 C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 Gene3D G3DSA:3.30.420.140 323 450 3.0E-154 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 Pfam PF09371 Tex-like protein N-terminal domain 9 193 3.3E-68 T 14-10-2018 IPR018974 Tex-like protein, N-terminal C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 SUPERFAMILY SSF53098 320 468 1.14E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 SMART SM00732 324 423 8.8E-37 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 SUPERFAMILY SSF158832 3 319 6.28E-121 T 14-10-2018 C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 SMART SM00316 648 719 4.8E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 Pfam PF12836 Helix-hairpin-helix motif 490 554 5.5E-28 T 14-10-2018 C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 Pfam PF00575 S1 RNA binding domain 648 719 1.5E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 SUPERFAMILY SSF47781 559 631 2.07E-20 T 14-10-2018 IPR010994 RuvA domain 2-like C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 Pfam PF16921 Tex protein YqgF-like domain 326 450 3.9E-50 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 Gene3D G3DSA:1.10.10.650 3 109 3.0E-41 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 Gene3D G3DSA:1.10.150.310 498 629 1.7E-49 T 14-10-2018 C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 Gene3D G3DSA:1.10.3500.10 112 497 3.0E-154 T 14-10-2018 IPR023323 Tex-like domain superfamily C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 SUPERFAMILY SSF47781 469 555 6.89E-28 T 14-10-2018 IPR010994 RuvA domain 2-like C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 SUPERFAMILY SSF50249 636 724 5.74E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_05780 03acf053834f2b3b419bbb76b44fe175 768 Gene3D G3DSA:2.40.50.140 630 725 1.6E-29 T 14-10-2018 C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 Pfam PF13654 AAA domain 32 544 1.2E-183 T 14-10-2018 C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 Gene3D G3DSA:1.10.8.60 455 541 2.3E-10 T 14-10-2018 C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 Gene3D G3DSA:3.40.50.300 239 454 2.4E-64 T 14-10-2018 C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 Gene3D G3DSA:3.40.50.300 11 167 6.8E-27 T 14-10-2018 C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 Gene3D G3DSA:3.30.230.10 547 782 1.6E-95 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 SUPERFAMILY SSF52540 43 543 1.11E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 SUPERFAMILY SSF54211 570 762 4.55E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 758 5.2E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 68 87 2.1E-12 T 14-10-2018 C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 651 670 2.1E-12 T 14-10-2018 C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 570 586 2.1E-12 T 14-10-2018 C3497_07230 96eb82204fb39a6ef2316c85f870fd1c 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 681 700 2.1E-12 T 14-10-2018 C3497_13110 869231179f83a28d1fbb85552999f73a 168 Pfam PF13187 4Fe-4S dicluster domain 41 88 3.8E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_13110 869231179f83a28d1fbb85552999f73a 168 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 12 162 5.5E-41 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 C3497_13110 869231179f83a28d1fbb85552999f73a 168 Gene3D G3DSA:3.30.70.20 37 96 5.1E-8 T 14-10-2018 C3497_13110 869231179f83a28d1fbb85552999f73a 168 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 30 168 23.666 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 C3497_13110 869231179f83a28d1fbb85552999f73a 168 SUPERFAMILY SSF54862 39 164 1.42E-18 T 14-10-2018 C3497_13110 869231179f83a28d1fbb85552999f73a 168 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_13110 869231179f83a28d1fbb85552999f73a 168 Gene3D G3DSA:3.30.70.20 104 166 2.4E-10 T 14-10-2018 C3497_13110 869231179f83a28d1fbb85552999f73a 168 Pfam PF12838 4Fe-4S dicluster domain 114 161 8.3E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_13110 869231179f83a28d1fbb85552999f73a 168 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 42 53 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_02975 e11f638759b1d8a8e1295fb42545fe7f 154 Gene3D G3DSA:2.30.30.220 1 123 8.1E-44 T 14-10-2018 IPR036760 SspB-like superfamily C3497_02975 e11f638759b1d8a8e1295fb42545fe7f 154 Pfam PF04386 Stringent starvation protein B 6 154 9.9E-32 T 14-10-2018 IPR007481 Stringent starvation protein B C3497_02975 e11f638759b1d8a8e1295fb42545fe7f 154 SUPERFAMILY SSF101738 2 109 3.92E-42 T 14-10-2018 IPR036760 SspB-like superfamily C3497_02975 e11f638759b1d8a8e1295fb42545fe7f 154 PIRSF PIRSF005276 1 154 8.4E-45 T 14-10-2018 IPR007481 Stringent starvation protein B C3497_12355 8e4b07e57960bf1fbf4bfbf3a1e0ee64 407 Pfam PF00482 Type II secretion system (T2SS), protein F 73 196 5.4E-30 T 14-10-2018 IPR018076 Type II secretion system F domain C3497_12355 8e4b07e57960bf1fbf4bfbf3a1e0ee64 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 397 5.7E-25 T 14-10-2018 IPR018076 Type II secretion system F domain C3497_12355 8e4b07e57960bf1fbf4bfbf3a1e0ee64 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 6.0E-16 T 14-10-2018 IPR003004 GspF/PilC family C3497_12355 8e4b07e57960bf1fbf4bfbf3a1e0ee64 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 6.0E-16 T 14-10-2018 IPR003004 GspF/PilC family C3497_12355 8e4b07e57960bf1fbf4bfbf3a1e0ee64 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 6.0E-16 T 14-10-2018 IPR003004 GspF/PilC family C3497_12355 8e4b07e57960bf1fbf4bfbf3a1e0ee64 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 6.0E-16 T 14-10-2018 IPR003004 GspF/PilC family C3497_12355 8e4b07e57960bf1fbf4bfbf3a1e0ee64 407 Gene3D G3DSA:1.20.81.30 260 371 6.7E-27 T 14-10-2018 C3497_12355 8e4b07e57960bf1fbf4bfbf3a1e0ee64 407 Gene3D G3DSA:1.20.81.30 61 175 3.3E-27 T 14-10-2018 C3497_08300 607737195e66723cb8e4c1520535dd38 223 Gene3D G3DSA:3.40.50.300 25 150 1.7E-23 T 14-10-2018 C3497_08300 607737195e66723cb8e4c1520535dd38 223 Pfam PF00308 Bacterial dnaA protein 15 197 3.2E-12 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA C3497_08300 607737195e66723cb8e4c1520535dd38 223 Gene3D G3DSA:1.10.8.60 152 218 4.0E-23 T 14-10-2018 C3497_08300 607737195e66723cb8e4c1520535dd38 223 SUPERFAMILY SSF52540 12 198 7.01E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_08300 607737195e66723cb8e4c1520535dd38 223 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 218 6.7E-70 T 14-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 C3497_10355 63eb87bccb50fbf6f848469b8734087c 85 Pfam PF00550 Phosphopantetheine attachment site 37 77 1.5E-4 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain C3497_10355 63eb87bccb50fbf6f848469b8734087c 85 Gene3D G3DSA:1.10.1200.10 2 82 2.2E-18 T 14-10-2018 IPR036736 ACP-like superfamily C3497_10355 63eb87bccb50fbf6f848469b8734087c 85 SUPERFAMILY SSF47336 3 83 3.31E-11 T 14-10-2018 IPR036736 ACP-like superfamily C3497_01145 0859d6eb5fae1b6ce63d2e29874944ef 129 Pfam PF07009 NusG domain II 24 119 6.0E-19 T 14-10-2018 IPR024045 NusG, domain 2 C3497_01145 0859d6eb5fae1b6ce63d2e29874944ef 129 Gene3D G3DSA:2.60.320.10 37 129 1.8E-19 T 14-10-2018 IPR038690 NusG, domain 2 superfamily C3497_08795 5e4b0fbdc454c97967f60840080913a1 126 Pfam PF09345 Domain of unknown function (DUF1987) 8 124 7.5E-39 T 14-10-2018 IPR018530 Domain of unknown function DUF1987 C3497_11615 04cca885d7c0125f387e592d58b8960d 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 110 21.496 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C3497_11615 04cca885d7c0125f387e592d58b8960d 112 SUPERFAMILY SSF55248 21 110 7.85E-30 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C3497_11615 04cca885d7c0125f387e592d58b8960d 112 Gene3D G3DSA:3.30.1360.20 21 112 3.6E-32 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C3497_11615 04cca885d7c0125f387e592d58b8960d 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 22 108 9.3E-30 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C3497_06025 579f5d9f7440e22e98b30918b47e7353 107 Pfam PF06865 Protein of unknown function (DUF1255) 15 106 3.3E-35 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 C3497_06025 579f5d9f7440e22e98b30918b47e7353 107 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 13 107 27.267 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 C3497_06025 579f5d9f7440e22e98b30918b47e7353 107 Gene3D G3DSA:2.60.120.10 1 107 7.4E-41 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_06025 579f5d9f7440e22e98b30918b47e7353 107 SUPERFAMILY SSF51182 15 106 3.34E-32 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C3497_10830 f3ad3bc9f375e9907851bed5ef9972a7 282 SUPERFAMILY SSF103481 190 280 4.18E-9 T 14-10-2018 C3497_10830 f3ad3bc9f375e9907851bed5ef9972a7 282 Pfam PF00892 EamA-like transporter family 4 131 8.0E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_10830 f3ad3bc9f375e9907851bed5ef9972a7 282 Pfam PF00892 EamA-like transporter family 146 278 5.1E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_10830 f3ad3bc9f375e9907851bed5ef9972a7 282 SUPERFAMILY SSF103481 33 134 9.94E-12 T 14-10-2018 C3497_10830 f3ad3bc9f375e9907851bed5ef9972a7 282 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 278 1.8E-92 T 14-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative C3497_07355 adf6d2bfb706cf39dfb389e81f88fa71 265 Gene3D G3DSA:3.40.1180.10 6 244 2.2E-91 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 C3497_07355 adf6d2bfb706cf39dfb389e81f88fa71 265 Pfam PF01255 Putative undecaprenyl diphosphate synthase 26 243 5.5E-80 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C3497_07355 adf6d2bfb706cf39dfb389e81f88fa71 265 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 C3497_07355 adf6d2bfb706cf39dfb389e81f88fa71 265 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 19 244 40.107 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C3497_07355 adf6d2bfb706cf39dfb389e81f88fa71 265 SUPERFAMILY SSF64005 16 239 6.15E-86 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 C3497_07355 adf6d2bfb706cf39dfb389e81f88fa71 265 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 19 243 2.5E-87 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C3497_02160 14516d5fd560e31594cfe2d0ffdfef31 193 Pfam PF02325 YGGT family 12 78 7.8E-16 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 C3497_02160 14516d5fd560e31594cfe2d0ffdfef31 193 Pfam PF02325 YGGT family 112 178 1.4E-16 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 C3497_06595 5d38421d11afcec27ad992ee4c925d8b 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 459 533 1.2E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3497_06595 5d38421d11afcec27ad992ee4c925d8b 550 Pfam PF00501 AMP-binding enzyme 31 450 1.3E-96 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3497_06595 5d38421d11afcec27ad992ee4c925d8b 550 Gene3D G3DSA:3.30.300.310 446 548 1.2E-35 T 14-10-2018 C3497_06595 5d38421d11afcec27ad992ee4c925d8b 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3497_06595 5d38421d11afcec27ad992ee4c925d8b 550 SUPERFAMILY SSF56801 17 545 3.4E-145 T 14-10-2018 C3497_06595 5d38421d11afcec27ad992ee4c925d8b 550 Gene3D G3DSA:3.40.50.12780 12 445 1.8E-106 T 14-10-2018 C3497_06220 a209b5144ac5802ff26f71e5186a00d3 90 Hamap MF_00460 Protein RnfH [rnfH]. 1 90 22.329 T 14-10-2018 IPR005346 RnfH protein C3497_06220 a209b5144ac5802ff26f71e5186a00d3 90 SUPERFAMILY SSF54285 1 75 3.18E-25 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp C3497_06220 a209b5144ac5802ff26f71e5186a00d3 90 Gene3D G3DSA:3.10.20.280 1 85 9.3E-29 T 14-10-2018 IPR037021 RnfH superfamily C3497_06220 a209b5144ac5802ff26f71e5186a00d3 90 Pfam PF03658 RnfH family Ubiquitin 1 83 1.4E-32 T 14-10-2018 IPR005346 RnfH protein C3497_10065 f4fc6aac0485437d7c76b2c3133a9181 99 Pfam PF00708 Acylphosphatase 14 95 2.1E-24 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C3497_10065 f4fc6aac0485437d7c76b2c3133a9181 99 Gene3D G3DSA:3.30.70.100 1 96 2.9E-29 T 14-10-2018 C3497_10065 f4fc6aac0485437d7c76b2c3133a9181 99 PRINTS PR00112 Acylphosphatase signature 32 57 8.7E-8 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C3497_10065 f4fc6aac0485437d7c76b2c3133a9181 99 PRINTS PR00112 Acylphosphatase signature 11 26 8.7E-8 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C3497_10065 f4fc6aac0485437d7c76b2c3133a9181 99 SUPERFAMILY SSF54975 11 96 8.72E-26 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C3497_10065 f4fc6aac0485437d7c76b2c3133a9181 99 ProSitePatterns PS00151 Acylphosphatase signature 2. 40 56 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C3497_08245 8504ea6736432635c13619f1f761a0f4 94 Gene3D G3DSA:3.30.70.240 2 89 3.3E-11 T 14-10-2018 C3497_08245 8504ea6736432635c13619f1f761a0f4 94 Pfam PF09827 CRISPR associated protein Cas2 7 72 2.5E-5 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 C3497_08245 8504ea6736432635c13619f1f761a0f4 94 SUPERFAMILY SSF143430 6 74 1.7E-11 T 14-10-2018 C3497_08245 8504ea6736432635c13619f1f761a0f4 94 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 5 92 9.487 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 C3497_12800 65e313fde4ecc630c3b2b8b7bddd63a2 362 Pfam PF00534 Glycosyl transferases group 1 173 334 7.7E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3497_12800 65e313fde4ecc630c3b2b8b7bddd63a2 362 Gene3D G3DSA:3.40.50.2000 14 348 3.3E-69 T 14-10-2018 C3497_12800 65e313fde4ecc630c3b2b8b7bddd63a2 362 Pfam PF13439 Glycosyltransferase Family 4 14 160 2.9E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_12800 65e313fde4ecc630c3b2b8b7bddd63a2 362 Gene3D G3DSA:3.40.50.2000 158 341 3.3E-69 T 14-10-2018 C3497_12800 65e313fde4ecc630c3b2b8b7bddd63a2 362 SUPERFAMILY SSF53756 2 357 3.77E-82 T 14-10-2018 C3497_01025 b12f45fba529d090c367122105f1c3a9 83 SUPERFAMILY SSF54285 5 83 4.07E-12 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp C3497_01025 b12f45fba529d090c367122105f1c3a9 83 Gene3D G3DSA:3.10.20.30 1 83 4.7E-12 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_01025 b12f45fba529d090c367122105f1c3a9 83 Pfam PF02597 ThiS family 23 83 3.0E-11 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 C3497_12365 dc27c8dae55ca48700ba7917fb6613c9 631 SUPERFAMILY SSF51735 146 273 3.74E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_12365 dc27c8dae55ca48700ba7917fb6613c9 631 Gene3D G3DSA:3.40.50.720 281 579 7.5E-112 T 14-10-2018 C3497_12365 dc27c8dae55ca48700ba7917fb6613c9 631 Pfam PF02719 Polysaccharide biosynthesis protein 286 569 1.0E-118 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain C3497_12365 dc27c8dae55ca48700ba7917fb6613c9 631 Gene3D G3DSA:3.40.50.720 142 267 2.1E-30 T 14-10-2018 C3497_12365 dc27c8dae55ca48700ba7917fb6613c9 631 SUPERFAMILY SSF51735 280 548 2.55E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_12365 dc27c8dae55ca48700ba7917fb6613c9 631 Pfam PF13727 CoA-binding domain 63 237 4.9E-13 T 14-10-2018 C3497_07960 f5bda0c5c1e8718b5e2c32ec2cfb3659 268 Gene3D G3DSA:3.40.50.1820 16 267 8.1E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_07960 f5bda0c5c1e8718b5e2c32ec2cfb3659 268 Pfam PF00561 alpha/beta hydrolase fold 38 180 3.4E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_07960 f5bda0c5c1e8718b5e2c32ec2cfb3659 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 64 79 2.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_07960 f5bda0c5c1e8718b5e2c32ec2cfb3659 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 2.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_07960 f5bda0c5c1e8718b5e2c32ec2cfb3659 268 SUPERFAMILY SSF53474 14 264 1.06E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_01565 c80dbc189664243dada4d2aa33210d90 680 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 117 598 9.8E-87 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit C3497_01565 c80dbc189664243dada4d2aa33210d90 680 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 22 673 8.7E-218 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ C3497_00350 8c6411e45e168b3de03ce90751563845 225 Gene3D G3DSA:1.10.287.540 73 109 4.2E-7 T 14-10-2018 C3497_00350 8c6411e45e168b3de03ce90751563845 225 PIRSF PIRSF016482 15 224 6.7E-57 T 14-10-2018 IPR007445 Pilus assembly protein, PilO C3497_00350 8c6411e45e168b3de03ce90751563845 225 Gene3D G3DSA:3.30.70.60 110 216 2.3E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 C3497_00350 8c6411e45e168b3de03ce90751563845 225 Pfam PF04350 Pilus assembly protein, PilO 65 206 7.2E-52 T 14-10-2018 IPR007445 Pilus assembly protein, PilO C3497_11985 3d554bc30d2a07d43119e6fcc98065db 369 SUPERFAMILY SSF55874 234 346 1.75E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_11985 3d554bc30d2a07d43119e6fcc98065db 369 Pfam PF06580 Histidine kinase 174 250 5.9E-20 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 C3497_11985 3d554bc30d2a07d43119e6fcc98065db 369 Gene3D G3DSA:3.30.565.10 226 360 2.7E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_12730 3e56b14d6b026c4d3ee5337fc7d35427 92 Pfam PF12836 Helix-hairpin-helix motif 22 84 1.6E-25 T 14-10-2018 C3497_12730 3e56b14d6b026c4d3ee5337fc7d35427 92 SUPERFAMILY SSF47781 21 86 6.23E-30 T 14-10-2018 IPR010994 RuvA domain 2-like C3497_12730 3e56b14d6b026c4d3ee5337fc7d35427 92 SMART SM00278 33 52 0.2 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3497_12730 3e56b14d6b026c4d3ee5337fc7d35427 92 SMART SM00278 63 82 110.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3497_12730 3e56b14d6b026c4d3ee5337fc7d35427 92 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 22 85 5.6E-20 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain C3497_12730 3e56b14d6b026c4d3ee5337fc7d35427 92 Gene3D G3DSA:1.10.150.280 20 89 1.4E-24 T 14-10-2018 C3497_04345 aebe1c933ad54b86f69983539b68578f 159 SUPERFAMILY SSF52788 1 135 4.19E-37 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily C3497_04345 aebe1c933ad54b86f69983539b68578f 159 SMART SM00226 1 135 1.9E-38 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C3497_04345 aebe1c933ad54b86f69983539b68578f 159 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 133 4.3E-20 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C3497_04345 aebe1c933ad54b86f69983539b68578f 159 Gene3D G3DSA:3.40.50.2300 1 135 8.1E-36 T 14-10-2018 C3497_12755 5d2c13b4ac6690eb685f96817e969fc9 317 Gene3D G3DSA:1.10.3470.10 1 317 7.9E-92 T 14-10-2018 IPR037294 ABC transporter, BtuC-like C3497_12755 5d2c13b4ac6690eb685f96817e969fc9 317 SUPERFAMILY SSF81345 3 314 7.32E-73 T 14-10-2018 IPR037294 ABC transporter, BtuC-like C3497_12755 5d2c13b4ac6690eb685f96817e969fc9 317 Pfam PF01032 FecCD transport family 11 314 3.9E-87 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 C3497_07075 741ae2fa9ce4b2ce8dd7ea4b97d5057e 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 110 1.0E-31 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07075 741ae2fa9ce4b2ce8dd7ea4b97d5057e 236 Gene3D G3DSA:3.10.20.30 1 105 1.2E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_07075 741ae2fa9ce4b2ce8dd7ea4b97d5057e 236 SUPERFAMILY SSF46548 106 234 1.67E-37 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3497_07075 741ae2fa9ce4b2ce8dd7ea4b97d5057e 236 Gene3D G3DSA:1.10.1060.10 106 236 6.8E-57 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3497_07075 741ae2fa9ce4b2ce8dd7ea4b97d5057e 236 SUPERFAMILY SSF54292 1 105 1.08E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3497_07075 741ae2fa9ce4b2ce8dd7ea4b97d5057e 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_07075 741ae2fa9ce4b2ce8dd7ea4b97d5057e 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 228 1.2E-84 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07075 741ae2fa9ce4b2ce8dd7ea4b97d5057e 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 4.7E-10 T 14-10-2018 C3497_12890 6651f1c51a5f03eb2787ca5d25dcd763 386 SUPERFAMILY SSF53383 8 373 1.51E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_12890 6651f1c51a5f03eb2787ca5d25dcd763 386 Gene3D G3DSA:3.40.640.10 1 256 3.8E-100 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_12890 6651f1c51a5f03eb2787ca5d25dcd763 386 PIRSF PIRSF000390 1 385 7.0E-112 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C3497_12890 6651f1c51a5f03eb2787ca5d25dcd763 386 Gene3D G3DSA:3.90.1150.10 258 385 1.1E-28 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_12890 6651f1c51a5f03eb2787ca5d25dcd763 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 377 8.8E-124 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C3497_00680 42022924e42b4717a99da49e5992fdda 143 PIRSF PIRSF038934 1 135 7.4E-38 T 14-10-2018 IPR010893 [NiFe]-hydrogenase maturation factor HyaE C3497_00680 42022924e42b4717a99da49e5992fdda 143 Pfam PF07449 Hydrogenase-1 expression protein HyaE 10 113 7.4E-25 T 14-10-2018 IPR010893 [NiFe]-hydrogenase maturation factor HyaE C3497_00680 42022924e42b4717a99da49e5992fdda 143 SUPERFAMILY SSF52833 5 126 1.91E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_00680 42022924e42b4717a99da49e5992fdda 143 Gene3D G3DSA:3.40.30.10 2 130 4.3E-36 T 14-10-2018 C3497_06005 f1a598ee231a18ae662e2f640e2e34dc 390 PIRSF PIRSF000521 1 146 6.7E-13 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_06005 f1a598ee231a18ae662e2f640e2e34dc 390 PIRSF PIRSF000521 160 387 6.6E-35 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_06005 f1a598ee231a18ae662e2f640e2e34dc 390 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 4 383 3.5E-144 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 C3497_06005 f1a598ee231a18ae662e2f640e2e34dc 390 SUPERFAMILY SSF53383 3 385 4.81E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_06005 f1a598ee231a18ae662e2f640e2e34dc 390 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 387 69.962 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 C3497_06005 f1a598ee231a18ae662e2f640e2e34dc 390 Gene3D G3DSA:3.40.640.10 47 293 1.4E-139 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_06005 f1a598ee231a18ae662e2f640e2e34dc 390 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_06005 f1a598ee231a18ae662e2f640e2e34dc 390 Pfam PF00202 Aminotransferase class-III 13 381 1.5E-111 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3497_06005 f1a598ee231a18ae662e2f640e2e34dc 390 Gene3D G3DSA:3.90.1150.10 13 377 1.4E-139 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_06410 8ac60b1ee30506501142cd004b85f70c 305 Pfam PF01926 50S ribosome-binding GTPase 119 175 1.2E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_06410 8ac60b1ee30506501142cd004b85f70c 305 Gene3D G3DSA:3.40.50.300 3 173 2.8E-40 T 14-10-2018 C3497_06410 8ac60b1ee30506501142cd004b85f70c 305 PIRSF PIRSF006230 1 279 2.3E-90 T 14-10-2018 IPR016478 GTPase, MTG1 C3497_06410 8ac60b1ee30506501142cd004b85f70c 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 177 192 4.8E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_06410 8ac60b1ee30506501142cd004b85f70c 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 119 139 4.8E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_06410 8ac60b1ee30506501142cd004b85f70c 305 Gene3D G3DSA:1.10.1580.10 178 267 6.4E-23 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily C3497_06410 8ac60b1ee30506501142cd004b85f70c 305 SUPERFAMILY SSF52540 9 248 5.22E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06410 8ac60b1ee30506501142cd004b85f70c 305 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 274 3.6E-96 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis C3497_07180 4378003ce0f71ebf5817d83cc1288943 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 311 6.4E-54 T 14-10-2018 IPR000160 GGDEF domain C3497_07180 4378003ce0f71ebf5817d83cc1288943 322 SUPERFAMILY SSF52172 1 142 9.53E-37 T 14-10-2018 IPR011006 CheY-like superfamily C3497_07180 4378003ce0f71ebf5817d83cc1288943 322 SUPERFAMILY SSF55073 151 311 9.42E-50 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_07180 4378003ce0f71ebf5817d83cc1288943 322 Gene3D G3DSA:3.40.50.2300 1 128 1.3E-33 T 14-10-2018 C3497_07180 4378003ce0f71ebf5817d83cc1288943 322 SMART SM00448 1 115 1.3E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_07180 4378003ce0f71ebf5817d83cc1288943 322 Gene3D G3DSA:3.30.70.270 132 313 1.2E-60 T 14-10-2018 C3497_07180 4378003ce0f71ebf5817d83cc1288943 322 Pfam PF00072 Response regulator receiver domain 4 115 2.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_07180 4378003ce0f71ebf5817d83cc1288943 322 SMART SM00267 135 313 3.1E-68 T 14-10-2018 IPR000160 GGDEF domain C3497_07180 4378003ce0f71ebf5817d83cc1288943 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 309 6.0E-50 T 14-10-2018 IPR000160 GGDEF domain C3497_04025 f69fc2688088836431116058a2fc7f44 555 SUPERFAMILY SSF52518 2 183 4.05E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_04025 f69fc2688088836431116058a2fc7f44 555 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 531 4.0E-49 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 C3497_04025 f69fc2688088836431116058a2fc7f44 555 Gene3D G3DSA:3.40.50.970 1 181 3.1E-69 T 14-10-2018 C3497_04025 f69fc2688088836431116058a2fc7f44 555 SUPERFAMILY SSF52467 187 351 4.62E-54 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C3497_04025 f69fc2688088836431116058a2fc7f44 555 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 327 6.6E-41 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 C3497_04025 f69fc2688088836431116058a2fc7f44 555 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 554 2.8E-207 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C3497_04025 f69fc2688088836431116058a2fc7f44 555 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 1.3E-59 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 C3497_04025 f69fc2688088836431116058a2fc7f44 555 Gene3D G3DSA:3.40.50.970 353 554 4.4E-67 T 14-10-2018 C3497_04025 f69fc2688088836431116058a2fc7f44 555 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 C3497_04025 f69fc2688088836431116058a2fc7f44 555 Gene3D G3DSA:3.40.50.1220 186 350 2.0E-54 T 14-10-2018 C3497_04025 f69fc2688088836431116058a2fc7f44 555 SUPERFAMILY SSF52518 360 553 6.79E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_04395 e9ac9b65b66c08266312aec6abf2c6a3 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04395 e9ac9b65b66c08266312aec6abf2c6a3 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.191 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04395 e9ac9b65b66c08266312aec6abf2c6a3 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 1.1E-77 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04395 e9ac9b65b66c08266312aec6abf2c6a3 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 38 145 1.4E-21 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04395 e9ac9b65b66c08266312aec6abf2c6a3 158 Gene3D G3DSA:3.40.50.12280 2 158 4.1E-78 T 14-10-2018 C3497_04395 e9ac9b65b66c08266312aec6abf2c6a3 158 SUPERFAMILY SSF56770 9 153 1.31E-66 T 14-10-2018 C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 SUPERFAMILY SSF52540 14 214 6.44E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 Gene3D G3DSA:2.40.30.10 226 320 3.8E-23 T 14-10-2018 C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 PRINTS PR00315 GTP-binding elongation factor signature 95 105 5.0E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 PRINTS PR00315 GTP-binding elongation factor signature 75 83 5.0E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 PRINTS PR00315 GTP-binding elongation factor signature 148 157 5.0E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 PRINTS PR00315 GTP-binding elongation factor signature 16 29 5.0E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 PRINTS PR00315 GTP-binding elongation factor signature 111 122 5.0E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 68 83 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 SUPERFAMILY SSF50465 324 425 7.19E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 Pfam PF00009 Elongation factor Tu GTP binding domain 15 198 9.7E-40 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 SUPERFAMILY SSF50447 227 320 2.0E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 Gene3D G3DSA:3.40.50.300 8 222 1.8E-64 T 14-10-2018 C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 15 425 1.7E-175 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C3497_00095 6925d0aa760aba41f8f21c110e383cf0 426 Gene3D G3DSA:2.40.30.10 322 425 8.4E-39 T 14-10-2018 C3497_01000 d6b49be2e6f81691d0a0be7d6e23d376 275 SUPERFAMILY SSF53807 24 263 1.53E-34 T 14-10-2018 C3497_01000 d6b49be2e6f81691d0a0be7d6e23d376 275 Gene3D G3DSA:3.40.50.1980 144 266 4.7E-7 T 14-10-2018 C3497_01000 d6b49be2e6f81691d0a0be7d6e23d376 275 Gene3D G3DSA:3.40.50.1980 23 141 4.8E-19 T 14-10-2018 C3497_01000 d6b49be2e6f81691d0a0be7d6e23d376 275 Pfam PF01497 Periplasmic binding protein 25 218 1.9E-12 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain C3497_03525 29e4e9a362e86a8d1ba30e8e4c0fe1ac 381 Pfam PF01578 Cytochrome C assembly protein 172 376 7.6E-45 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 C3497_03525 29e4e9a362e86a8d1ba30e8e4c0fe1ac 381 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 142 379 5.4E-71 T 14-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 C3497_07635 6208d1084a59d86a8eb34cc1c7398473 535 Gene3D G3DSA:3.20.20.80 91 325 1.6E-11 T 14-10-2018 C3497_07635 6208d1084a59d86a8eb34cc1c7398473 535 SUPERFAMILY SSF51445 50 316 8.35E-51 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C3497_10975 b26191963a951050021ba2d26af77a79 512 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 102 398 1.1E-40 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_10975 b26191963a951050021ba2d26af77a79 512 Gene3D G3DSA:1.10.287.470 164 210 3.3E-42 T 14-10-2018 C3497_10975 b26191963a951050021ba2d26af77a79 512 Gene3D G3DSA:2.40.50.320 422 504 7.0E-20 T 14-10-2018 C3497_10975 b26191963a951050021ba2d26af77a79 512 Pfam PF00529 HlyD membrane-fusion protein of T1SS 75 390 2.0E-7 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_10975 b26191963a951050021ba2d26af77a79 512 Pfam PF11604 Copper binding periplasmic protein CusF 429 496 2.3E-23 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF C3497_10975 b26191963a951050021ba2d26af77a79 512 SUPERFAMILY SSF111369 126 330 2.22E-16 T 14-10-2018 C3497_10975 b26191963a951050021ba2d26af77a79 512 Gene3D G3DSA:2.40.420.20 329 421 4.4E-24 T 14-10-2018 C3497_10975 b26191963a951050021ba2d26af77a79 512 Gene3D G3DSA:2.40.30.170 251 324 3.3E-42 T 14-10-2018 C3497_10975 b26191963a951050021ba2d26af77a79 512 Gene3D G3DSA:2.40.50.100 128 250 3.3E-42 T 14-10-2018 C3497_10975 b26191963a951050021ba2d26af77a79 512 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 113 323 4.3E-71 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 Gene3D G3DSA:1.10.3120.10 118 421 1.3E-91 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 SUPERFAMILY SSF109998 251 434 1.57E-45 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 SUPERFAMILY SSF102735 1 134 1.7E-31 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 TIGRFAM TIGR00115 tig: trigger factor 11 416 2.2E-129 T 14-10-2018 IPR005215 Trigger factor GO:0015031 C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 7.7E-33 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 266 417 2.0E-30 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 240 3.2E-14 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 Gene3D G3DSA:3.10.50.40 153 249 1.3E-91 T 14-10-2018 C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 SUPERFAMILY SSF54534 104 244 9.43E-33 T 14-10-2018 C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 Gene3D G3DSA:3.30.70.1050 1 117 1.5E-31 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 Hamap MF_00303 Trigger factor [tig]. 1 423 20.13 T 14-10-2018 IPR005215 Trigger factor GO:0015031 C3497_05010 869cbc11f1330eaff92c18eb6e2b5053 437 PIRSF PIRSF003095 1 437 1.7E-118 T 14-10-2018 IPR005215 Trigger factor GO:0015031 C3497_00260 c229bb7972e3b71771aace6b69cb66fd 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 9.6E-50 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 C3497_00260 c229bb7972e3b71771aace6b69cb66fd 126 SUPERFAMILY SSF55298 1 125 7.7E-47 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C3497_00260 c229bb7972e3b71771aace6b69cb66fd 126 Gene3D G3DSA:3.30.1330.40 3 125 1.9E-52 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C3497_00260 c229bb7972e3b71771aace6b69cb66fd 126 Pfam PF01042 Endoribonuclease L-PSP 9 124 4.5E-39 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 C3497_01135 b5de6342ae183dac843f2482fee73754 483 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_01135 b5de6342ae183dac843f2482fee73754 483 Pfam PF01235 Sodium:alanine symporter family 52 460 2.2E-155 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_01135 b5de6342ae183dac843f2482fee73754 483 PRINTS PR00175 Sodium/alanine symporter signature 176 194 3.6E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_01135 b5de6342ae183dac843f2482fee73754 483 PRINTS PR00175 Sodium/alanine symporter signature 416 436 3.6E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_01135 b5de6342ae183dac843f2482fee73754 483 PRINTS PR00175 Sodium/alanine symporter signature 295 313 3.6E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_01135 b5de6342ae183dac843f2482fee73754 483 PRINTS PR00175 Sodium/alanine symporter signature 86 108 3.6E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_01135 b5de6342ae183dac843f2482fee73754 483 PRINTS PR00175 Sodium/alanine symporter signature 204 223 3.6E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_01135 b5de6342ae183dac843f2482fee73754 483 PRINTS PR00175 Sodium/alanine symporter signature 353 375 3.6E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_01135 b5de6342ae183dac843f2482fee73754 483 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 447 1.1E-142 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 SUPERFAMILY SSF55781 627 789 5.67E-12 T 14-10-2018 C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 Pfam PF08668 HDOD domain 294 484 6.7E-38 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 Gene3D G3DSA:1.10.3210.10 274 562 1.5E-52 T 14-10-2018 C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 Pfam PF00069 Protein kinase domain 9 249 1.3E-55 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 SUPERFAMILY SSF56112 4 264 8.02E-72 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 SUPERFAMILY SSF109604 282 559 1.82E-51 T 14-10-2018 C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 Gene3D G3DSA:3.30.450.40 630 791 1.1E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 SMART SM00220 8 264 8.2E-58 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 126 138 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 Gene3D G3DSA:3.30.200.20 1 86 4.3E-21 T 14-10-2018 C3497_07395 85b36dd0f558e839d08d12dbabf0f029 791 Gene3D G3DSA:1.10.510.10 88 273 3.5E-47 T 14-10-2018 C3497_10145 2f7c3f6b8ba44aa874a22f5aa6101dae 157 Gene3D G3DSA:3.30.700.10 15 116 4.3E-11 T 14-10-2018 C3497_10145 2f7c3f6b8ba44aa874a22f5aa6101dae 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 2.6E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10145 2f7c3f6b8ba44aa874a22f5aa6101dae 157 SUPERFAMILY SSF54523 15 100 7.85E-12 T 14-10-2018 C3497_10145 2f7c3f6b8ba44aa874a22f5aa6101dae 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10145 2f7c3f6b8ba44aa874a22f5aa6101dae 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 34 2.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_13770 42d1860de43c6dad7a452def832855cc 874 SMART SM00052 614 860 6.2E-123 T 14-10-2018 IPR001633 EAL domain C3497_13770 42d1860de43c6dad7a452def832855cc 874 Gene3D G3DSA:3.30.450.20 217 249 1.7E-14 T 14-10-2018 C3497_13770 42d1860de43c6dad7a452def832855cc 874 SUPERFAMILY SSF141868 619 865 2.35E-94 T 14-10-2018 IPR035919 EAL domain superfamily C3497_13770 42d1860de43c6dad7a452def832855cc 874 Gene3D G3DSA:3.30.70.270 433 617 2.5E-62 T 14-10-2018 C3497_13770 42d1860de43c6dad7a452def832855cc 874 SMART SM00267 428 604 1.2E-64 T 14-10-2018 IPR000160 GGDEF domain C3497_13770 42d1860de43c6dad7a452def832855cc 874 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 437 601 3.6E-43 T 14-10-2018 IPR000160 GGDEF domain C3497_13770 42d1860de43c6dad7a452def832855cc 874 SUPERFAMILY SSF103190 151 221 2.9E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily C3497_13770 42d1860de43c6dad7a452def832855cc 874 Gene3D G3DSA:3.30.450.20 148 216 1.7E-14 T 14-10-2018 C3497_13770 42d1860de43c6dad7a452def832855cc 874 Pfam PF00563 EAL domain 620 855 1.0E-76 T 14-10-2018 IPR001633 EAL domain C3497_13770 42d1860de43c6dad7a452def832855cc 874 Pfam PF00672 HAMP domain 359 409 3.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_13770 42d1860de43c6dad7a452def832855cc 874 Pfam PF00990 Diguanylate cyclase, GGDEF domain 439 600 1.2E-50 T 14-10-2018 IPR000160 GGDEF domain C3497_13770 42d1860de43c6dad7a452def832855cc 874 Gene3D G3DSA:3.20.20.450 618 865 3.5E-103 T 14-10-2018 IPR035919 EAL domain superfamily C3497_13770 42d1860de43c6dad7a452def832855cc 874 SMART SM00304 359 412 1.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_13770 42d1860de43c6dad7a452def832855cc 874 SUPERFAMILY SSF55073 444 605 1.78E-49 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_03430 528929b84ad57c55bf07cb7ffd143720 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 1.6E-97 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C3497_03430 528929b84ad57c55bf07cb7ffd143720 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 3.1E-101 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C3497_03430 528929b84ad57c55bf07cb7ffd143720 354 Gene3D G3DSA:3.20.20.70 1 354 1.8E-155 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_03430 528929b84ad57c55bf07cb7ffd143720 354 PIRSF PIRSF001359 1 329 1.1E-86 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C3497_03430 528929b84ad57c55bf07cb7ffd143720 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 7.1E-192 T 14-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 C3497_03430 528929b84ad57c55bf07cb7ffd143720 354 SUPERFAMILY SSF51569 3 329 4.4E-110 T 14-10-2018 C3497_03430 528929b84ad57c55bf07cb7ffd143720 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C3497_03430 528929b84ad57c55bf07cb7ffd143720 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 Gene3D G3DSA:3.40.50.300 437 611 5.5E-71 T 14-10-2018 C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 444 598 4.4E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 Gene3D G3DSA:2.40.30.10 612 731 5.4E-38 T 14-10-2018 C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 SUPERFAMILY SSF46955 3 51 2.2E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 358 940 2.3E-265 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 SUPERFAMILY SSF50447 842 938 5.7E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 Gene3D G3DSA:3.40.50.10050 734 841 9.1E-39 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 ProSitePatterns PS01176 Initiation factor 2 signature. 891 913 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 Pfam PF11987 Translation-initiation factor 2 725 830 6.9E-39 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 3.5E-7 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 363 414 1.5E-15 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 Pfam PF00009 Elongation factor Tu GTP binding domain 445 601 1.3E-34 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 Gene3D G3DSA:2.40.30.10 842 939 2.6E-33 T 14-10-2018 C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 938 17.614 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 SUPERFAMILY SSF52540 431 610 4.79E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 SUPERFAMILY SSF52156 717 847 9.15E-40 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 98 1.1E-14 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial C3497_05260 6ab6fddf65c6960b79607217f75094ca 940 SUPERFAMILY SSF50447 613 694 3.74E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 PRINTS PR00139 Asparaginase/glutaminase family signature 81 99 7.7E-15 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 7.7E-15 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 7.7E-15 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 82 92 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 SMART SM00870 5 323 7.4E-112 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 334 6.4E-79 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 SUPERFAMILY SSF53774 3 334 9.29E-95 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 PIRSF PIRSF500176 2 332 1.1E-89 T 14-10-2018 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 PIRSF PIRSF001220 1 334 2.2E-78 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 Gene3D G3DSA:3.40.50.1170 1 203 1.1E-68 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 Pfam PF00710 Asparaginase, N-terminal 5 190 8.6E-60 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 C3497_05320 75fed0675919756ed1033e068d0d9e9b 335 Gene3D G3DSA:3.40.50.40 208 335 1.9E-34 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 C3497_00160 332f20dac16d343cd98c96605bc68ad7 428 ProSitePatterns PS00099 Thiolases active site. 408 421 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3497_00160 332f20dac16d343cd98c96605bc68ad7 428 SUPERFAMILY SSF53901 289 426 3.4E-34 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_00160 332f20dac16d343cd98c96605bc68ad7 428 SUPERFAMILY SSF53901 5 287 1.58E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_00160 332f20dac16d343cd98c96605bc68ad7 428 ProSitePatterns PS00737 Thiolases signature 2. 373 389 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 C3497_00160 332f20dac16d343cd98c96605bc68ad7 428 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 425 5.1E-129 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3497_00160 332f20dac16d343cd98c96605bc68ad7 428 Gene3D G3DSA:3.40.47.10 7 293 1.0E-124 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_00160 332f20dac16d343cd98c96605bc68ad7 428 Pfam PF02803 Thiolase, C-terminal domain 288 426 4.5E-38 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3497_00160 332f20dac16d343cd98c96605bc68ad7 428 PIRSF PIRSF000429 1 428 1.6E-126 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3497_00160 332f20dac16d343cd98c96605bc68ad7 428 Pfam PF00108 Thiolase, N-terminal domain 5 280 7.8E-62 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3497_00160 332f20dac16d343cd98c96605bc68ad7 428 Gene3D G3DSA:3.40.47.10 127 425 1.0E-124 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_10810 16b5e86384b7afade9ca374e8ed5a379 241 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 6 226 8.9E-90 T 14-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_10810 16b5e86384b7afade9ca374e8ed5a379 241 SMART SM00382 36 229 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10810 16b5e86384b7afade9ca374e8ed5a379 241 Pfam PF00005 ABC transporter 29 182 2.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_10810 16b5e86384b7afade9ca374e8ed5a379 241 Gene3D G3DSA:3.40.50.300 3 234 3.9E-56 T 14-10-2018 C3497_10810 16b5e86384b7afade9ca374e8ed5a379 241 SUPERFAMILY SSF52540 28 227 2.77E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10810 16b5e86384b7afade9ca374e8ed5a379 241 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_14230 54bb51cbedd0620bc1a127061fdaa62b 317 Gene3D G3DSA:3.40.50.20 10 117 4.2E-106 T 14-10-2018 C3497_14230 54bb51cbedd0620bc1a127061fdaa62b 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 5 123 7.4E-42 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C3497_14230 54bb51cbedd0620bc1a127061fdaa62b 317 Gene3D G3DSA:3.30.1490.20 140 204 4.2E-106 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_14230 54bb51cbedd0620bc1a127061fdaa62b 317 SUPERFAMILY SSF52440 5 125 8.63E-39 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3497_14230 54bb51cbedd0620bc1a127061fdaa62b 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 127 300 3.6E-71 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C3497_14230 54bb51cbedd0620bc1a127061fdaa62b 317 Gene3D G3DSA:3.30.470.20 118 298 4.2E-106 T 14-10-2018 C3497_14230 54bb51cbedd0620bc1a127061fdaa62b 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 5 315 2.8E-122 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C3497_14230 54bb51cbedd0620bc1a127061fdaa62b 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 148.286 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C3497_14230 54bb51cbedd0620bc1a127061fdaa62b 317 SUPERFAMILY SSF56059 127 314 6.19E-58 T 14-10-2018 C3497_09240 5db3aee565273ee8ec4df6cf8b46dad8 551 PRINTS PR01009 Flagellar M-ring protein signature 204 222 7.3E-40 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 C3497_09240 5db3aee565273ee8ec4df6cf8b46dad8 551 PRINTS PR01009 Flagellar M-ring protein signature 275 293 7.3E-40 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 C3497_09240 5db3aee565273ee8ec4df6cf8b46dad8 551 PRINTS PR01009 Flagellar M-ring protein signature 161 175 7.3E-40 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 C3497_09240 5db3aee565273ee8ec4df6cf8b46dad8 551 PRINTS PR01009 Flagellar M-ring protein signature 359 383 7.3E-40 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 C3497_09240 5db3aee565273ee8ec4df6cf8b46dad8 551 PRINTS PR01009 Flagellar M-ring protein signature 129 147 7.3E-40 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 C3497_09240 5db3aee565273ee8ec4df6cf8b46dad8 551 PIRSF PIRSF004862 11 548 1.9E-151 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 C3497_09240 5db3aee565273ee8ec4df6cf8b46dad8 551 Pfam PF01514 Secretory protein of YscJ/FliF family 39 228 4.2E-73 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF C3497_09240 5db3aee565273ee8ec4df6cf8b46dad8 551 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 20 543 2.4E-128 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 C3497_09240 5db3aee565273ee8ec4df6cf8b46dad8 551 Pfam PF08345 Flagellar M-ring protein C-terminal 262 435 9.0E-51 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal C3497_09240 5db3aee565273ee8ec4df6cf8b46dad8 551 Gene3D G3DSA:3.30.300.30 130 231 8.5E-13 T 14-10-2018 C3497_08375 2635f3a2a4d98bce223db4f3cb2fe650 144 Pfam PF08897 Domain of unknown function (DUF1841) 5 138 1.3E-56 T 14-10-2018 IPR014993 Protein of unknown function DUF1841 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 7.9E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 7.9E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 7.9E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 7.9E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 522 536 7.9E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 Gene3D G3DSA:2.70.20.10 215 490 8.3E-164 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 SMART SM00436 126 221 2.5E-24 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 Gene3D G3DSA:1.10.460.10 160 607 8.3E-164 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 Pfam PF01751 Toprim domain 4 132 7.9E-12 T 14-10-2018 IPR006171 TOPRIM domain C3497_14745 6f91429e60581208c17b112ca8266b6f 840 Pfam PF01131 DNA topoisomerase 156 598 3.3E-115 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 Gene3D G3DSA:3.40.50.140 3 153 7.8E-48 T 14-10-2018 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 331 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 Gene3D G3DSA:1.10.290.10 288 416 8.3E-164 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 SMART SM00437 279 559 3.4E-74 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 C3497_14745 6f91429e60581208c17b112ca8266b6f 840 SMART SM00493 3 126 1.4E-14 T 14-10-2018 IPR006171 TOPRIM domain C3497_14745 6f91429e60581208c17b112ca8266b6f 840 Pfam PF13342 C-terminal repeat of topoisomerase 755 814 1.6E-18 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat C3497_14745 6f91429e60581208c17b112ca8266b6f 840 Pfam PF13342 C-terminal repeat of topoisomerase 648 707 4.0E-20 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat C3497_14745 6f91429e60581208c17b112ca8266b6f 840 SUPERFAMILY SSF56712 3 612 1.44E-172 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain C3497_14745 6f91429e60581208c17b112ca8266b6f 840 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 642 3.9E-168 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 C3497_05610 4f0f321a433cabcf78d93132b635d588 382 Gene3D G3DSA:3.40.640.10 6 253 2.1E-70 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_05610 4f0f321a433cabcf78d93132b635d588 382 Gene3D G3DSA:3.90.1150.10 254 381 9.1E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_05610 4f0f321a433cabcf78d93132b635d588 382 PIRSF PIRSF001434 1 382 3.9E-110 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_05610 4f0f321a433cabcf78d93132b635d588 382 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 194 208 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_05610 4f0f321a433cabcf78d93132b635d588 382 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 21 378 6.6E-97 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_05610 4f0f321a433cabcf78d93132b635d588 382 SUPERFAMILY SSF53383 38 379 7.63E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_01110 e8286df8323756ad9f0cca00094423ff 667 Pfam PF02785 Biotin carboxylase C-terminal domain 336 444 9.5E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 SUPERFAMILY SSF52440 1 113 7.19E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3497_01110 e8286df8323756ad9f0cca00094423ff 667 Pfam PF00364 Biotin-requiring enzyme 599 661 5.6E-14 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3497_01110 e8286df8323756ad9f0cca00094423ff 667 SUPERFAMILY SSF51230 595 663 3.66E-18 T 14-10-2018 IPR011053 Single hybrid motif C3497_01110 e8286df8323756ad9f0cca00094423ff 667 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.2E-77 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 Gene3D G3DSA:3.30.700.40 442 545 7.0E-8 T 14-10-2018 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 SUPERFAMILY SSF51246 331 449 8.89E-41 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 Gene3D G3DSA:3.30.1490.20 131 202 2.7E-161 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 SUPERFAMILY SSF56059 93 348 5.83E-68 T 14-10-2018 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 Gene3D G3DSA:3.40.50.20 1 85 1.7E-36 T 14-10-2018 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 Gene3D G3DSA:3.30.470.20 87 441 2.7E-161 T 14-10-2018 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 SMART SM00878 336 443 6.9E-60 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.8E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_01110 e8286df8323756ad9f0cca00094423ff 667 Gene3D G3DSA:2.40.50.100 597 663 5.5E-21 T 14-10-2018 C3497_09350 89a20c497ac607f73ca56f3b3c16cb3f 220 Gene3D G3DSA:2.30.30.910 86 214 7.0E-31 T 14-10-2018 C3497_09350 89a20c497ac607f73ca56f3b3c16cb3f 220 Pfam PF13861 FlgD Tudor-like domain 86 217 2.5E-12 T 14-10-2018 IPR025963 FlgD Tudor-like domain C3497_09350 89a20c497ac607f73ca56f3b3c16cb3f 220 Gene3D G3DSA:2.60.40.4070 101 186 7.0E-31 T 14-10-2018 C3497_09350 89a20c497ac607f73ca56f3b3c16cb3f 220 Pfam PF13860 FlgD Ig-like domain 106 177 1.3E-20 T 14-10-2018 IPR025965 FlgD Ig-like domain C3497_09350 89a20c497ac607f73ca56f3b3c16cb3f 220 Pfam PF03963 Flagellar hook capping protein - N-terminal region 5 75 4.0E-22 T 14-10-2018 IPR005648 Flagellar hook capping protein C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 Gene3D G3DSA:3.30.2090.10 726 814 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 SUPERFAMILY SSF82866 296 497 1.12E-50 T 14-10-2018 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 Pfam PF00873 AcrB/AcrD/AcrF family 1 1031 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 SUPERFAMILY SSF82693 135 330 3.14E-29 T 14-10-2018 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 14-10-2018 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 SUPERFAMILY SSF82714 729 814 1.22E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 SUPERFAMILY SSF82866 811 1035 1.03E-42 T 14-10-2018 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 Gene3D G3DSA:3.30.70.1440 674 870 0.0 T 14-10-2018 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 SUPERFAMILY SSF82693 38 131 8.89E-27 T 14-10-2018 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1041 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 SUPERFAMILY SSF82693 570 674 7.32E-32 T 14-10-2018 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 Gene3D G3DSA:1.20.1640.10 8 517 0.0 T 14-10-2018 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 9.1E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 9.1E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.1E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.1E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 9.1E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 9.1E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 9.1E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 9.1E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 9.1E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 SUPERFAMILY SSF82714 182 272 3.79E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 Gene3D G3DSA:1.20.1640.10 518 1027 0.0 T 14-10-2018 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 Gene3D G3DSA:3.30.70.1430 572 673 0.0 T 14-10-2018 C3497_13740 2858a835653ff97bcd9cdc5dd1b17434 1052 Gene3D G3DSA:3.30.70.1430 38 822 0.0 T 14-10-2018 C3497_01275 7fb34dca42cdc8bc540c3b3bc410394d 504 Gene3D G3DSA:3.40.50.300 6 131 2.2E-10 T 14-10-2018 C3497_01275 7fb34dca42cdc8bc540c3b3bc410394d 504 Gene3D G3DSA:3.40.50.300 199 368 3.7E-20 T 14-10-2018 C3497_01275 7fb34dca42cdc8bc540c3b3bc410394d 504 Pfam PF05872 Bacterial protein of unknown function (DUF853) 8 504 1.3E-237 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal C3497_01275 7fb34dca42cdc8bc540c3b3bc410394d 504 SUPERFAMILY SSF52540 11 379 8.38E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13960 5e5b89f0d29cc79a18232bdf1fba46f8 120 Pfam PF01042 Endoribonuclease L-PSP 11 115 3.1E-21 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 C3497_13960 5e5b89f0d29cc79a18232bdf1fba46f8 120 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 91 110 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 C3497_13960 5e5b89f0d29cc79a18232bdf1fba46f8 120 SUPERFAMILY SSF55298 11 117 1.13E-27 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C3497_13960 5e5b89f0d29cc79a18232bdf1fba46f8 120 Gene3D G3DSA:3.30.1330.40 1 119 2.6E-34 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C3497_00200 21bd1c9dfd2ac8c50a648c5bcab54983 445 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 255 6.2E-107 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 C3497_00200 21bd1c9dfd2ac8c50a648c5bcab54983 445 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 445 44.883 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 C3497_00200 21bd1c9dfd2ac8c50a648c5bcab54983 445 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 445 3.0E-185 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 C3497_00200 21bd1c9dfd2ac8c50a648c5bcab54983 445 Pfam PF11973 NQRA C-terminal domain 260 308 1.1E-20 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 C3497_06125 c6177b4a13e6d96e96cc6b9811ce2871 425 SUPERFAMILY SSF51905 149 279 2.37E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_06125 c6177b4a13e6d96e96cc6b9811ce2871 425 Gene3D G3DSA:3.50.50.60 146 279 4.5E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_06125 c6177b4a13e6d96e96cc6b9811ce2871 425 SUPERFAMILY SSF51905 268 351 2.1E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_06125 c6177b4a13e6d96e96cc6b9811ce2871 425 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 357 422 2.2E-14 T 14-10-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 C3497_06125 c6177b4a13e6d96e96cc6b9811ce2871 425 Gene3D G3DSA:3.50.50.60 32 343 4.5E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_06125 c6177b4a13e6d96e96cc6b9811ce2871 425 Gene3D G3DSA:3.90.760.10 355 423 4.6E-7 T 14-10-2018 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 C3497_06125 c6177b4a13e6d96e96cc6b9811ce2871 425 SUPERFAMILY SSF55424 357 423 2.75E-16 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3497_06125 c6177b4a13e6d96e96cc6b9811ce2871 425 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 32 338 2.1E-15 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3497_06125 c6177b4a13e6d96e96cc6b9811ce2871 425 SUPERFAMILY SSF51905 31 150 1.48E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_09965 e4b021d5fc654243a1d5d25c87802884 406 Pfam PF05940 NnrS protein 12 400 4.9E-58 T 14-10-2018 IPR010266 NnrS C3497_14585 5beb816144d91b3f7ac65762ad01fe1e 305 Pfam PF01171 PP-loop family 46 206 1.2E-13 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 C3497_14585 5beb816144d91b3f7ac65762ad01fe1e 305 Gene3D G3DSA:3.40.50.620 9 265 4.1E-45 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_14585 5beb816144d91b3f7ac65762ad01fe1e 305 SUPERFAMILY SSF52402 32 260 2.51E-52 T 14-10-2018 C3497_14585 5beb816144d91b3f7ac65762ad01fe1e 305 PIRSF PIRSF004976 2 280 2.2E-69 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 C3497_14585 5beb816144d91b3f7ac65762ad01fe1e 305 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 14 273 56.492 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 C3497_03605 a6ccaebe40c9682062d21e2cb18c561e 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 53 3.8E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_03605 a6ccaebe40c9682062d21e2cb18c561e 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 3.8E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_03605 a6ccaebe40c9682062d21e2cb18c561e 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 3.8E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_03605 a6ccaebe40c9682062d21e2cb18c561e 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 3.8E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_03605 a6ccaebe40c9682062d21e2cb18c561e 108 SMART SM00418 21 99 3.2E-25 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_03605 a6ccaebe40c9682062d21e2cb18c561e 108 Pfam PF01022 Bacterial regulatory protein, arsR family 28 73 7.7E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_03605 a6ccaebe40c9682062d21e2cb18c561e 108 Gene3D G3DSA:1.10.10.10 9 104 3.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_03605 a6ccaebe40c9682062d21e2cb18c561e 108 SUPERFAMILY SSF46785 11 102 1.78E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_00855 0d37ee909d7de1f8d80229029aa17fc9 604 SMART SM00382 381 579 8.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00855 0d37ee909d7de1f8d80229029aa17fc9 604 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 579 601 9.9E-11 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal C3497_00855 0d37ee909d7de1f8d80229029aa17fc9 604 SUPERFAMILY SSF52540 355 600 2.34E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00855 0d37ee909d7de1f8d80229029aa17fc9 604 Gene3D G3DSA:3.40.50.300 352 602 6.9E-59 T 14-10-2018 C3497_00855 0d37ee909d7de1f8d80229029aa17fc9 604 Pfam PF00005 ABC transporter 373 530 1.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_00855 0d37ee909d7de1f8d80229029aa17fc9 604 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 309 7.1E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 SMART SM00073 1 98 1.2E-26 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 SUPERFAMILY SSF55874 405 587 1.96E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 507 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 543 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 Pfam PF01584 CheW-like domain 595 715 3.0E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 344 402 5.7E-9 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 SUPERFAMILY SSF50341 588 714 1.44E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 SUPERFAMILY SSF47226 1 122 1.44E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 SMART SM00260 581 714 5.1E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 Gene3D G3DSA:1.10.287.560 343 403 2.2E-10 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 Pfam PF01627 Hpt domain 4 93 7.0E-15 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 451 588 8.8E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 SMART SM00387 448 589 1.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 Gene3D G3DSA:2.40.50.180 612 669 1.2E-32 T 14-10-2018 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 Gene3D G3DSA:2.30.30.40 589 710 1.2E-32 T 14-10-2018 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 SMART SM01231 343 403 1.5E-13 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 Gene3D G3DSA:1.20.120.160 1 133 3.8E-34 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 Gene3D G3DSA:3.30.565.10 404 588 7.5E-60 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_01230 f0cc8e4fc956d26ffe2213330fe097cb 737 SUPERFAMILY SSF47384 344 404 7.06E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_05685 17a1a10e3e4aa164607f4dfdb0588147 338 SUPERFAMILY SSF51735 1 182 1.26E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_05685 17a1a10e3e4aa164607f4dfdb0588147 338 Gene3D G3DSA:1.10.3730.40 182 338 2.7E-73 T 14-10-2018 C3497_05685 17a1a10e3e4aa164607f4dfdb0588147 338 PIRSF PIRSF000116 3 204 5.6E-49 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3497_05685 17a1a10e3e4aa164607f4dfdb0588147 338 PIRSF PIRSF000116 201 331 2.4E-13 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3497_05685 17a1a10e3e4aa164607f4dfdb0588147 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 45.446 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3497_05685 17a1a10e3e4aa164607f4dfdb0588147 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 1.2E-132 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3497_05685 17a1a10e3e4aa164607f4dfdb0588147 338 SUPERFAMILY SSF48179 183 332 4.25E-69 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_05685 17a1a10e3e4aa164607f4dfdb0588147 338 Gene3D G3DSA:3.40.50.720 1 181 6.1E-80 T 14-10-2018 C3497_05685 17a1a10e3e4aa164607f4dfdb0588147 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.4E-62 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3497_05685 17a1a10e3e4aa164607f4dfdb0588147 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 3.4E-75 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3497_05135 32aee394f62bf080b9d7119cd86b48cf 417 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 3 417 2.2E-145 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 C3497_05135 32aee394f62bf080b9d7119cd86b48cf 417 Pfam PF12704 MacB-like periplasmic core domain 29 234 1.7E-18 T 14-10-2018 IPR025857 MacB-like periplasmic core domain C3497_05135 32aee394f62bf080b9d7119cd86b48cf 417 Pfam PF02687 FtsX-like permease family 304 410 8.7E-14 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3497_02155 ca2b9d2de2ddcec6f1a85f8588d092ec 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 263 2.7E-77 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C3497_02155 ca2b9d2de2ddcec6f1a85f8588d092ec 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 95 1.5E-18 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal C3497_02155 ca2b9d2de2ddcec6f1a85f8588d092ec 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 263 26.309 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C3497_02155 ca2b9d2de2ddcec6f1a85f8588d092ec 270 SUPERFAMILY SSF48179 158 266 1.43E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_02155 ca2b9d2de2ddcec6f1a85f8588d092ec 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 1.5E-32 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C3497_02155 ca2b9d2de2ddcec6f1a85f8588d092ec 270 PIRSF PIRSF000193 1 266 2.7E-69 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C3497_02155 ca2b9d2de2ddcec6f1a85f8588d092ec 270 Gene3D G3DSA:1.10.3730.10 161 267 3.0E-38 T 14-10-2018 C3497_02155 ca2b9d2de2ddcec6f1a85f8588d092ec 270 Gene3D G3DSA:3.40.50.720 1 160 1.2E-45 T 14-10-2018 C3497_02155 ca2b9d2de2ddcec6f1a85f8588d092ec 270 SUPERFAMILY SSF51735 1 156 1.26E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_05900 d95e1a9e435f24c559068995af559581 183 SUPERFAMILY SSF55811 2 165 5.55E-39 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3497_05900 d95e1a9e435f24c559068995af559581 183 Pfam PF00293 NUDIX domain 44 100 1.1E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3497_05900 d95e1a9e435f24c559068995af559581 183 Gene3D G3DSA:2.20.70.10 1 35 6.1E-18 T 14-10-2018 C3497_05900 d95e1a9e435f24c559068995af559581 183 Pfam PF14803 Nudix N-terminal 2 35 7.1E-18 T 14-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 C3497_05900 d95e1a9e435f24c559068995af559581 183 Gene3D G3DSA:3.90.79.10 36 178 7.6E-38 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 Pfam PF00873 AcrB/AcrD/AcrF family 4 1006 3.2E-296 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 Gene3D G3DSA:1.20.1640.10 10 503 0.0 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 Gene3D G3DSA:3.30.70.1430 558 650 0.0 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 Gene3D G3DSA:3.30.70.1320 134 328 0.0 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 SUPERFAMILY SSF82714 702 787 8.89E-19 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 Gene3D G3DSA:3.30.70.1430 40 797 0.0 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 SUPERFAMILY SSF82866 297 492 8.24E-47 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 4.4E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 4.4E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.4E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 4.4E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 4.4E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 4.4E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.4E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 4.4E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 4.4E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 SUPERFAMILY SSF82693 136 326 2.27E-20 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 Gene3D G3DSA:3.30.2090.10 178 271 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 Gene3D G3DSA:3.30.70.1440 651 846 0.0 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 Gene3D G3DSA:3.30.2090.10 701 789 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 SUPERFAMILY SSF82693 40 134 4.45E-26 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 SUPERFAMILY SSF82714 182 266 6.67E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 SUPERFAMILY SSF82693 556 650 2.35E-19 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 SUPERFAMILY SSF82866 787 1011 1.05E-50 T 14-10-2018 C3497_08280 4448befaedbc72a17dbbbb7e632a7357 1038 Gene3D G3DSA:1.20.1640.10 504 1003 0.0 T 14-10-2018 C3497_12685 509b8b5b078fb10d4ef8c9913fe331de 954 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 795 918 2.8E-34 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein C3497_12685 509b8b5b078fb10d4ef8c9913fe331de 954 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 104 124 3.2E-33 T 14-10-2018 C3497_12685 509b8b5b078fb10d4ef8c9913fe331de 954 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 307 319 3.2E-33 T 14-10-2018 C3497_12685 509b8b5b078fb10d4ef8c9913fe331de 954 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 76 101 3.2E-33 T 14-10-2018 C3497_12685 509b8b5b078fb10d4ef8c9913fe331de 954 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 265 3.2E-33 T 14-10-2018 C3497_12685 509b8b5b078fb10d4ef8c9913fe331de 954 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 3.2E-33 T 14-10-2018 C3497_12685 509b8b5b078fb10d4ef8c9913fe331de 954 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 217 238 3.2E-33 T 14-10-2018 C3497_12685 509b8b5b078fb10d4ef8c9913fe331de 954 Pfam PF13244 Domain of unknown function (DUF4040) 609 674 5.9E-18 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 C3497_12685 509b8b5b078fb10d4ef8c9913fe331de 954 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 114 5.6E-9 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_12685 509b8b5b078fb10d4ef8c9913fe331de 954 Pfam PF00361 Proton-conducting membrane transporter 127 403 1.2E-60 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 SUPERFAMILY SSF53901 7 274 4.65E-74 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 90 108 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 Gene3D G3DSA:3.40.47.10 132 395 4.1E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 Pfam PF02803 Thiolase, C-terminal domain 276 398 2.1E-41 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 PIRSF PIRSF000429 2 399 6.8E-124 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 SUPERFAMILY SSF53901 276 398 5.63E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 Gene3D G3DSA:3.40.47.10 10 281 4.1E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 Pfam PF00108 Thiolase, N-terminal domain 9 267 3.3E-73 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 397 5.4E-136 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3497_00190 d36215e5da719d559a49b2c606ef6e8b 399 ProSitePatterns PS00737 Thiolases signature 2. 344 360 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 C3497_03755 0808fda3e7088abcf396eb30a5543ec5 206 SUPERFAMILY SSF47240 43 177 5.37E-17 T 14-10-2018 IPR009078 Ferritin-like superfamily C3497_03755 0808fda3e7088abcf396eb30a5543ec5 206 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 45 206 1.4E-41 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 C3497_03755 0808fda3e7088abcf396eb30a5543ec5 206 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 6 206 30.055 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 C3497_03755 0808fda3e7088abcf396eb30a5543ec5 206 Gene3D G3DSA:1.20.1260.10 37 199 3.4E-5 T 14-10-2018 IPR012347 Ferritin-like C3497_08180 9efd4521e12afdaf6fb19adad44ad48e 230 SUPERFAMILY SSF52540 2 216 2.72E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_08180 9efd4521e12afdaf6fb19adad44ad48e 230 Gene3D G3DSA:3.40.50.300 1 224 2.7E-56 T 14-10-2018 C3497_08180 9efd4521e12afdaf6fb19adad44ad48e 230 Pfam PF00005 ABC transporter 17 159 6.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_08180 9efd4521e12afdaf6fb19adad44ad48e 230 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 230 1.1E-103 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE C3497_08180 9efd4521e12afdaf6fb19adad44ad48e 230 SMART SM00382 26 209 2.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_08745 9488a2981c065d0174efaab34f5aed77 913 Gene3D G3DSA:3.40.50.300 263 509 3.8E-66 T 14-10-2018 C3497_08745 9488a2981c065d0174efaab34f5aed77 913 Gene3D G3DSA:3.40.50.300 1 244 2.6E-60 T 14-10-2018 C3497_08745 9488a2981c065d0174efaab34f5aed77 913 Pfam PF00005 ABC transporter 22 169 2.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_08745 9488a2981c065d0174efaab34f5aed77 913 SUPERFAMILY SSF52540 8 233 4.05E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_08745 9488a2981c065d0174efaab34f5aed77 913 Pfam PF12698 ABC-2 family transporter protein 566 905 5.0E-45 T 14-10-2018 C3497_08745 9488a2981c065d0174efaab34f5aed77 913 Pfam PF00005 ABC transporter 287 430 2.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_08745 9488a2981c065d0174efaab34f5aed77 913 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_08745 9488a2981c065d0174efaab34f5aed77 913 SMART SM00382 295 486 2.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_08745 9488a2981c065d0174efaab34f5aed77 913 SMART SM00382 31 248 2.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_08745 9488a2981c065d0174efaab34f5aed77 913 SUPERFAMILY SSF52540 270 490 2.88E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07725 03f476b747a595bc6573b6f6ce78e7e9 286 Pfam PF08668 HDOD domain 28 210 3.0E-34 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_07725 03f476b747a595bc6573b6f6ce78e7e9 286 Gene3D G3DSA:1.10.3210.10 6 246 2.4E-42 T 14-10-2018 C3497_07725 03f476b747a595bc6573b6f6ce78e7e9 286 SUPERFAMILY SSF109604 15 280 8.16E-43 T 14-10-2018 C3497_01540 54466f02d9e43f5a617e030aa46542cd 496 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 225 1.2E-23 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain C3497_01540 54466f02d9e43f5a617e030aa46542cd 496 SUPERFAMILY SSF52317 247 441 3.55E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_01540 54466f02d9e43f5a617e030aa46542cd 496 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 247 432 2.4E-55 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 C3497_01540 54466f02d9e43f5a617e030aa46542cd 496 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 211.271 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 C3497_01540 54466f02d9e43f5a617e030aa46542cd 496 SUPERFAMILY SSF52540 1 231 3.77E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01540 54466f02d9e43f5a617e030aa46542cd 496 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 1 473 2.3E-140 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 C3497_01540 54466f02d9e43f5a617e030aa46542cd 496 Gene3D G3DSA:3.40.50.880 248 384 1.9E-17 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_01540 54466f02d9e43f5a617e030aa46542cd 496 Gene3D G3DSA:3.40.50.300 1 229 4.6E-56 T 14-10-2018 C3497_04285 b634627e87be6bc858ac56c58100b811 569 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 301 561 2.4E-71 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 C3497_04285 b634627e87be6bc858ac56c58100b811 569 SUPERFAMILY SSF161098 294 549 5.23E-36 T 14-10-2018 IPR035906 MetI-like superfamily C3497_04285 b634627e87be6bc858ac56c58100b811 569 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 337 561 8.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_04285 b634627e87be6bc858ac56c58100b811 569 Gene3D G3DSA:1.10.3720.10 315 563 1.4E-32 T 14-10-2018 IPR035906 MetI-like superfamily C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 SUPERFAMILY SSF47323 403 562 3.92E-40 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 SUPERFAMILY SSF52374 3 398 1.97E-93 T 14-10-2018 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 550 4.5E-162 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 Gene3D G3DSA:1.10.730.10 394 552 1.2E-32 T 14-10-2018 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 SUPERFAMILY SSF57770 139 173 9.94E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 Pfam PF09334 tRNA synthetases class I (M) 5 410 5.8E-142 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 Gene3D G3DSA:2.40.50.140 599 719 1.5E-30 T 14-10-2018 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 578 719 2.3E-37 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 561 39.47 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 Gene3D G3DSA:2.20.28.20 139 173 2.5E-142 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 Gene3D G3DSA:3.40.50.620 5 393 2.5E-142 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 9.8E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 PRINTS PR01041 Methionyl-tRNA synthetase signature 398 409 9.8E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 9.8E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 9.8E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 PRINTS PR01041 Methionyl-tRNA synthetase signature 260 271 9.8E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 PRINTS PR01041 Methionyl-tRNA synthetase signature 304 319 9.8E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 Pfam PF01588 Putative tRNA binding domain 614 715 5.4E-19 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 C3497_10055 5e91c6511efe997d5a4374b3549fec63 719 SUPERFAMILY SSF50249 604 718 2.69E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_00845 291bc8fa7d32ae1ea68beef4407dbc88 382 SUPERFAMILY SSF53822 23 380 4.52E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_00845 291bc8fa7d32ae1ea68beef4407dbc88 382 Pfam PF13458 Periplasmic binding protein 24 376 2.4E-56 T 14-10-2018 IPR028081 Leucine-binding protein domain C3497_00845 291bc8fa7d32ae1ea68beef4407dbc88 382 Gene3D G3DSA:3.40.50.2300 141 373 4.9E-125 T 14-10-2018 C3497_00845 291bc8fa7d32ae1ea68beef4407dbc88 382 Gene3D G3DSA:3.40.50.2300 26 364 4.9E-125 T 14-10-2018 C3497_11855 ed45a92dc4244453e03f1e2da9197e08 223 Pfam PF00027 Cyclic nucleotide-binding domain 33 118 6.1E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_11855 ed45a92dc4244453e03f1e2da9197e08 223 Gene3D G3DSA:1.10.10.10 146 216 7.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_11855 ed45a92dc4244453e03f1e2da9197e08 223 Pfam PF13545 Crp-like helix-turn-helix domain 152 214 4.3E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_11855 ed45a92dc4244453e03f1e2da9197e08 223 Gene3D G3DSA:2.60.120.10 5 145 1.3E-42 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_11855 ed45a92dc4244453e03f1e2da9197e08 223 SUPERFAMILY SSF46785 150 215 2.92E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_11855 ed45a92dc4244453e03f1e2da9197e08 223 SMART SM00419 159 207 6.7E-8 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_11855 ed45a92dc4244453e03f1e2da9197e08 223 SUPERFAMILY SSF51206 11 147 1.7E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C3497_12100 18650f40a40bb15545205b29274f97b4 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 294 2.3E-118 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C3497_12100 18650f40a40bb15545205b29274f97b4 305 SUPERFAMILY SSF54211 3 125 4.7E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_12100 18650f40a40bb15545205b29274f97b4 305 Gene3D G3DSA:3.30.230.20 1 127 2.1E-47 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C3497_12100 18650f40a40bb15545205b29274f97b4 305 Gene3D G3DSA:3.30.1700.10 128 303 2.6E-66 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C3497_12100 18650f40a40bb15545205b29274f97b4 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 7.8E-106 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C3497_12100 18650f40a40bb15545205b29274f97b4 305 SUPERFAMILY SSF54211 134 277 9.1E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_12100 18650f40a40bb15545205b29274f97b4 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 45.506 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C3497_12815 c2a4a6adc892634898cb133191418c89 368 Gene3D G3DSA:3.40.50.2000 178 345 1.5E-32 T 14-10-2018 C3497_12815 c2a4a6adc892634898cb133191418c89 368 Gene3D G3DSA:3.40.50.2000 109 358 1.5E-32 T 14-10-2018 C3497_12815 c2a4a6adc892634898cb133191418c89 368 SUPERFAMILY SSF53756 31 359 3.77E-39 T 14-10-2018 C3497_12815 c2a4a6adc892634898cb133191418c89 368 Pfam PF13692 Glycosyl transferases group 1 196 328 6.7E-16 T 14-10-2018 C3497_12815 c2a4a6adc892634898cb133191418c89 368 Pfam PF13439 Glycosyltransferase Family 4 30 181 4.6E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_01590 b0e619e7e3ac3f77fb224fddde8b2f6d 363 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 220 2.0E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_01590 b0e619e7e3ac3f77fb224fddde8b2f6d 363 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 116 145 2.0E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_01590 b0e619e7e3ac3f77fb224fddde8b2f6d 363 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 222 251 2.0E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_01590 b0e619e7e3ac3f77fb224fddde8b2f6d 363 SMART SM00304 49 101 8.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_01590 b0e619e7e3ac3f77fb224fddde8b2f6d 363 SMART SM00304 269 332 86.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_01590 b0e619e7e3ac3f77fb224fddde8b2f6d 363 Pfam PF00672 HAMP domain 51 98 6.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_01590 b0e619e7e3ac3f77fb224fddde8b2f6d 363 SMART SM00283 102 335 5.0E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_01590 b0e619e7e3ac3f77fb224fddde8b2f6d 363 Gene3D G3DSA:1.10.287.950 49 337 5.6E-73 T 14-10-2018 C3497_01590 b0e619e7e3ac3f77fb224fddde8b2f6d 363 SUPERFAMILY SSF58104 69 336 1.44E-63 T 14-10-2018 C3497_01590 b0e619e7e3ac3f77fb224fddde8b2f6d 363 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 162 320 2.5E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_01840 4cf6573e6890bd118a75371ef0c8092b 156 Gene3D G3DSA:1.10.455.10 2 155 4.8E-61 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily C3497_01840 4cf6573e6890bd118a75371ef0c8092b 156 PIRSF PIRSF002122 3 156 5.9E-58 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 C3497_01840 4cf6573e6890bd118a75371ef0c8092b 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.457 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 C3497_01840 4cf6573e6890bd118a75371ef0c8092b 156 SUPERFAMILY SSF47973 2 149 4.97E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily C3497_01840 4cf6573e6890bd118a75371ef0c8092b 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.3E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain C3497_01840 4cf6573e6890bd118a75371ef0c8092b 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.3E-66 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 C3497_01840 4cf6573e6890bd118a75371ef0c8092b 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 SMART SM00086 367 409 1.9E-7 T 14-10-2018 IPR001610 PAC motif C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 Gene3D G3DSA:3.30.450.20 278 436 4.2E-31 T 14-10-2018 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 632 6.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 599 6.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 651 6.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 613 6.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 Pfam PF00512 His Kinase A (phospho-acceptor) domain 432 499 2.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 Pfam PF00989 PAS fold 294 406 1.4E-20 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 Gene3D G3DSA:1.10.287.130 437 499 1.1E-18 T 14-10-2018 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 SMART SM00091 293 360 5.5E-10 T 14-10-2018 IPR000014 PAS domain C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 SUPERFAMILY SSF55785 280 407 1.16E-26 T 14-10-2018 IPR035965 PAS domain superfamily C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 SUPERFAMILY SSF55874 495 652 6.55E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 SUPERFAMILY SSF47384 424 500 1.06E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 Gene3D G3DSA:3.30.565.10 501 654 2.5E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 SMART SM00387 544 654 8.1E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 SMART SM00388 431 502 3.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 545 653 1.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_02760 b4373496c78f4e1813dd525d15dcafb8 655 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 291 414 3.4E-26 T 14-10-2018 IPR000014 PAS domain C3497_03125 553c3e1c925654a6688f03f263c14452 237 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 21 176 8.5E-22 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ C3497_00415 155fb4cd1273905f63c1754364e0c411 271 SUPERFAMILY SSF46689 219 268 1.25E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_00415 155fb4cd1273905f63c1754364e0c411 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 2.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3497_00415 155fb4cd1273905f63c1754364e0c411 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 2.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3497_00415 155fb4cd1273905f63c1754364e0c411 271 Pfam PF12833 Helix-turn-helix domain 189 266 1.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3497_00415 155fb4cd1273905f63c1754364e0c411 271 SMART SM00342 183 265 8.2E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3497_00415 155fb4cd1273905f63c1754364e0c411 271 Gene3D G3DSA:1.10.10.60 167 271 3.1E-22 T 14-10-2018 C3497_00415 155fb4cd1273905f63c1754364e0c411 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 261 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 C3497_00415 155fb4cd1273905f63c1754364e0c411 271 SUPERFAMILY SSF51182 29 199 3.02E-7 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.6E-7 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 1.6E-7 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 1.6E-7 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 PRINTS PR00097 Anthranilate synthase component II signature 173 186 2.9E-6 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 PRINTS PR00097 Anthranilate synthase component II signature 77 88 2.9E-6 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 PRINTS PR00097 Anthranilate synthase component II signature 50 59 2.9E-6 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 521 1.2E-151 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 Gene3D G3DSA:3.40.50.620 205 401 8.0E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 521 56.419 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 Pfam PF00958 GMP synthase C terminal domain 429 520 1.2E-44 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 6.7E-5 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 6.7E-5 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 6.7E-5 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 SUPERFAMILY SSF54810 401 521 1.57E-51 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 Gene3D G3DSA:3.30.300.10 402 521 9.8E-53 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 SUPERFAMILY SSF52317 3 233 9.72E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 200 6.2E-75 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 Pfam PF00117 Glutamine amidotransferase class-I 8 196 1.8E-38 T 14-10-2018 IPR017926 Glutamine amidotransferase C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 SUPERFAMILY SSF52402 193 416 2.87E-59 T 14-10-2018 C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 Pfam PF02540 NAD synthase 214 294 1.1E-8 T 14-10-2018 IPR022310 NAD/GMP synthase C3497_06995 ad1cede1523018d9db82b266c14c2e57 521 Gene3D G3DSA:3.40.50.880 5 202 2.6E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 PIRSF PIRSF000381 2 1202 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 944 1215 5.3E-123 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 SUPERFAMILY SSF51717 359 629 7.85E-89 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Pfam PF02574 Homocysteine S-methyltransferase 18 328 1.9E-77 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Gene3D G3DSA:1.10.288.10 942 1099 1.6E-132 T 14-10-2018 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 SUPERFAMILY SSF52242 750 900 2.49E-47 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Gene3D G3DSA:3.20.20.330 3 342 5.7E-127 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 TIGRFAM TIGR02082 metH: methionine synthase 14 1199 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Pfam PF02310 B12 binding domain 754 844 1.0E-19 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 SUPERFAMILY SSF47644 652 743 2.88E-26 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Pfam PF02607 B12 binding domain 659 736 1.7E-24 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 SUPERFAMILY SSF82282 9 402 2.88E-115 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Gene3D G3DSA:3.10.196.10 913 1229 1.6E-132 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Gene3D G3DSA:3.40.50.280 750 901 4.9E-56 T 14-10-2018 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 SUPERFAMILY SSF56507 909 1229 2.22E-121 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Gene3D G3DSA:3.20.20.20 343 644 1.0E-125 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Pfam PF00809 Pterin binding enzyme 363 600 2.8E-55 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 SMART SM01018 657 744 4.0E-42 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_14135 95edbea9cade91cc9ff3a6b775ae97d6 1229 Gene3D G3DSA:1.10.1240.10 650 741 1.6E-36 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_07705 d1cb2e3b90384880ce22ba1990be2f5a 714 Gene3D G3DSA:3.30.70.270 280 459 2.8E-61 T 14-10-2018 C3497_07705 d1cb2e3b90384880ce22ba1990be2f5a 714 Gene3D G3DSA:3.20.20.450 460 710 4.9E-104 T 14-10-2018 IPR035919 EAL domain superfamily C3497_07705 d1cb2e3b90384880ce22ba1990be2f5a 714 Pfam PF00990 Diguanylate cyclase, GGDEF domain 285 441 1.2E-50 T 14-10-2018 IPR000160 GGDEF domain C3497_07705 d1cb2e3b90384880ce22ba1990be2f5a 714 SUPERFAMILY SSF55073 290 447 1.02E-50 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_07705 d1cb2e3b90384880ce22ba1990be2f5a 714 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 281 444 5.8E-42 T 14-10-2018 IPR000160 GGDEF domain C3497_07705 d1cb2e3b90384880ce22ba1990be2f5a 714 SMART SM00052 456 702 2.5E-119 T 14-10-2018 IPR001633 EAL domain C3497_07705 d1cb2e3b90384880ce22ba1990be2f5a 714 Pfam PF00563 EAL domain 462 697 5.2E-77 T 14-10-2018 IPR001633 EAL domain C3497_07705 d1cb2e3b90384880ce22ba1990be2f5a 714 SMART SM00267 274 446 5.3E-63 T 14-10-2018 IPR000160 GGDEF domain C3497_07705 d1cb2e3b90384880ce22ba1990be2f5a 714 SUPERFAMILY SSF141868 461 707 1.31E-91 T 14-10-2018 IPR035919 EAL domain superfamily C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 8.3E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 Gene3D G3DSA:1.10.10.10 139 204 5.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 SUPERFAMILY SSF52172 12 160 2.42E-33 T 14-10-2018 IPR011006 CheY-like superfamily C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 Pfam PF00072 Response regulator receiver domain 12 119 1.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 SMART SM00421 145 202 5.9E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 SMART SM00448 10 121 2.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 SUPERFAMILY SSF46894 141 202 1.96E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_11655 1ad2dbc321395a7cab49dfebd4df35d0 211 Gene3D G3DSA:3.40.50.2300 5 137 1.2E-49 T 14-10-2018 C3497_00885 6d00656b520ec505fea6feec4c60593e 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 19 151 6.1E-41 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_00885 6d00656b520ec505fea6feec4c60593e 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 14 155 28.479 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_00885 6d00656b520ec505fea6feec4c60593e 156 Gene3D G3DSA:3.40.50.960 12 156 7.4E-53 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_00885 6d00656b520ec505fea6feec4c60593e 156 SUPERFAMILY SSF52121 16 155 1.83E-53 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_00885 6d00656b520ec505fea6feec4c60593e 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 18 152 1.0E-50 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 476 2.7E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 321 1.8E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 SUPERFAMILY SSF47384 240 321 5.89E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 Gene3D G3DSA:3.30.565.10 327 481 3.1E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 Pfam PF08521 Two-component sensor kinase N-terminal 36 179 5.8E-40 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 SMART SM00388 257 322 2.4E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 SUPERFAMILY SSF55874 311 477 8.51E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 Gene3D G3DSA:1.10.287.130 208 322 7.8E-24 T 14-10-2018 C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 475 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 SMART SM00304 204 256 4.5E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_03030 0b888bb6d815632ccd6ac4f3ccc91815 500 SMART SM00387 369 478 7.6E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_04505 579edec7b88733802c5adecd5311ff95 285 Gene3D G3DSA:1.10.3210.10 1 273 6.3E-68 T 14-10-2018 C3497_04505 579edec7b88733802c5adecd5311ff95 285 Pfam PF08668 HDOD domain 14 203 5.4E-54 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_04505 579edec7b88733802c5adecd5311ff95 285 SUPERFAMILY SSF109604 5 268 2.29E-59 T 14-10-2018 C3497_01940 cebfc91eff7e2c44c381d7b97e2eb512 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 9.6E-41 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01940 cebfc91eff7e2c44c381d7b97e2eb512 117 SUPERFAMILY SSF53137 3 115 2.4E-53 T 14-10-2018 C3497_01940 cebfc91eff7e2c44c381d7b97e2eb512 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.717 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01940 cebfc91eff7e2c44c381d7b97e2eb512 117 Gene3D G3DSA:3.30.420.100 1 117 2.2E-44 T 14-10-2018 C3497_01940 cebfc91eff7e2c44c381d7b97e2eb512 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.3E-39 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_13090 a652f631a6d8c2cb41e3dfaa2bba5ac5 306 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 43 298 8.9E-101 T 14-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family C3497_13090 a652f631a6d8c2cb41e3dfaa2bba5ac5 306 SUPERFAMILY SSF54862 113 301 1.22E-18 T 14-10-2018 C3497_13090 a652f631a6d8c2cb41e3dfaa2bba5ac5 306 Pfam PF12801 4Fe-4S binding domain 105 147 2.5E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_13090 a652f631a6d8c2cb41e3dfaa2bba5ac5 306 Pfam PF12801 4Fe-4S binding domain 195 230 0.003 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_04535 8c8f7002c46f90b69741aafb35924cd3 71 Gene3D G3DSA:1.20.58.660 4 68 4.8E-7 T 14-10-2018 C3497_04535 8c8f7002c46f90b69741aafb35924cd3 71 Pfam PF04325 Protein of unknown function (DUF465) 16 59 4.1E-15 T 14-10-2018 IPR007420 Protein of unknown function DUF465 C3497_10330 e135ede8efaec217216c4cf0e90605a0 302 Gene3D G3DSA:3.40.1160.10 14 301 5.0E-100 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3497_10330 e135ede8efaec217216c4cf0e90605a0 302 Hamap MF_00082 Acetylglutamate kinase [argB]. 33 294 51.582 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3497_10330 e135ede8efaec217216c4cf0e90605a0 302 TIGRFAM TIGR00761 argB: acetylglutamate kinase 35 276 2.1E-75 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3497_10330 e135ede8efaec217216c4cf0e90605a0 302 PIRSF PIRSF000728 19 301 5.3E-106 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3497_10330 e135ede8efaec217216c4cf0e90605a0 302 Pfam PF00696 Amino acid kinase family 34 278 4.8E-46 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C3497_10330 e135ede8efaec217216c4cf0e90605a0 302 SUPERFAMILY SSF53633 14 301 4.19E-94 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3497_10330 e135ede8efaec217216c4cf0e90605a0 302 PRINTS PR00474 Glutamate 5-kinase family signature 251 271 1.2E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3497_10330 e135ede8efaec217216c4cf0e90605a0 302 PRINTS PR00474 Glutamate 5-kinase family signature 201 228 1.2E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3497_10845 d8691e705396f8aad0c725ff04db6e49 113 Pfam PF13560 Helix-turn-helix domain 4 62 8.5E-15 T 14-10-2018 C3497_10845 d8691e705396f8aad0c725ff04db6e49 113 SUPERFAMILY SSF47413 3 68 1.15E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3497_10845 d8691e705396f8aad0c725ff04db6e49 113 SMART SM00530 8 64 3.9E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_10845 d8691e705396f8aad0c725ff04db6e49 113 Gene3D G3DSA:1.10.260.40 1 82 2.5E-17 T 14-10-2018 C3497_06455 7ffbfc227987e723042584f8f9f5c414 227 PIRSF PIRSF006755 4 224 1.8E-68 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C3497_06455 7ffbfc227987e723042584f8f9f5c414 227 Pfam PF13500 AAA domain 8 211 4.6E-38 T 14-10-2018 C3497_06455 7ffbfc227987e723042584f8f9f5c414 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 4 221 29.05 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C3497_06455 7ffbfc227987e723042584f8f9f5c414 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 8 178 2.8E-50 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C3497_06455 7ffbfc227987e723042584f8f9f5c414 227 SUPERFAMILY SSF52540 6 214 9.18E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06455 7ffbfc227987e723042584f8f9f5c414 227 Gene3D G3DSA:3.40.50.300 6 222 5.2E-66 T 14-10-2018 C3497_11015 b5bac911c263657612d1205ff5b06829 226 SMART SM00862 145 220 1.1E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_11015 b5bac911c263657612d1205ff5b06829 226 Gene3D G3DSA:1.10.10.10 123 225 6.9E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_11015 b5bac911c263657612d1205ff5b06829 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 1.3E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_11015 b5bac911c263657612d1205ff5b06829 226 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_11015 b5bac911c263657612d1205ff5b06829 226 Gene3D G3DSA:3.40.50.2300 1 121 7.9E-39 T 14-10-2018 C3497_11015 b5bac911c263657612d1205ff5b06829 226 SMART SM00448 1 112 1.1E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_11015 b5bac911c263657612d1205ff5b06829 226 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 4.6E-108 T 14-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 C3497_11015 b5bac911c263657612d1205ff5b06829 226 SUPERFAMILY SSF52172 1 174 4.23E-40 T 14-10-2018 IPR011006 CheY-like superfamily C3497_13065 a03b062d82268911b186aa72a5741993 263 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 55 238 5.8E-66 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13065 a03b062d82268911b186aa72a5741993 263 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 55 72 6.2E-45 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13065 a03b062d82268911b186aa72a5741993 263 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 131 151 6.2E-45 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13065 a03b062d82268911b186aa72a5741993 263 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 72 92 6.2E-45 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13065 a03b062d82268911b186aa72a5741993 263 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 166 192 6.2E-45 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13065 a03b062d82268911b186aa72a5741993 263 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 110 130 6.2E-45 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13065 a03b062d82268911b186aa72a5741993 263 Pfam PF01578 Cytochrome C assembly protein 39 194 1.5E-27 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 C3497_04810 366244e442365d5d76c29fec44229f17 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 144 365 2.2E-68 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain C3497_04810 366244e442365d5d76c29fec44229f17 374 SUPERFAMILY SSF51735 139 312 1.98E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_04810 366244e442365d5d76c29fec44229f17 374 SUPERFAMILY SSF52283 4 170 3.91E-44 T 14-10-2018 C3497_04810 366244e442365d5d76c29fec44229f17 374 Gene3D G3DSA:3.40.50.720 5 361 5.0E-131 T 14-10-2018 C3497_04810 366244e442365d5d76c29fec44229f17 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 6 139 1.1E-35 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal C3497_04810 366244e442365d5d76c29fec44229f17 374 Gene3D G3DSA:3.40.50.720 139 317 5.0E-131 T 14-10-2018 C3497_04810 366244e442365d5d76c29fec44229f17 374 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 C3497_04810 366244e442365d5d76c29fec44229f17 374 SMART SM01003 6 139 2.0E-56 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal C3497_04810 366244e442365d5d76c29fec44229f17 374 SMART SM01002 148 310 2.3E-79 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain C3497_09340 d0a56da88618176d139b7714591613cb 245 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 222 2.1E-59 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 C3497_09340 d0a56da88618176d139b7714591613cb 245 Pfam PF00460 Flagella basal body rod protein 5 35 5.0E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 C3497_09340 d0a56da88618176d139b7714591613cb 245 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 169 240 4.7E-23 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain C3497_09340 d0a56da88618176d139b7714591613cb 245 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site C3497_09340 d0a56da88618176d139b7714591613cb 245 SUPERFAMILY SSF117143 78 203 3.53E-22 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like C3497_09340 d0a56da88618176d139b7714591613cb 245 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.5E-37 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G C3497_13505 dad9e1371ec8cf030ac37464719880ca 656 Pfam PF02687 FtsX-like permease family 563 649 2.6E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3497_13505 dad9e1371ec8cf030ac37464719880ca 656 Pfam PF12704 MacB-like periplasmic core domain 283 501 1.1E-35 T 14-10-2018 IPR025857 MacB-like periplasmic core domain C3497_13505 dad9e1371ec8cf030ac37464719880ca 656 Pfam PF00005 ABC transporter 39 187 1.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_13505 dad9e1371ec8cf030ac37464719880ca 656 SMART SM00382 48 235 6.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_13505 dad9e1371ec8cf030ac37464719880ca 656 Gene3D G3DSA:3.40.50.300 17 268 1.8E-69 T 14-10-2018 C3497_13505 dad9e1371ec8cf030ac37464719880ca 656 SUPERFAMILY SSF52540 19 241 2.59E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13505 dad9e1371ec8cf030ac37464719880ca 656 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_00205 2ae50c5cbee83607d81b1118150dd2b2 404 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 4 398 7.8E-187 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 C3497_00205 2ae50c5cbee83607d81b1118150dd2b2 404 PIRSF PIRSF016055 1 404 8.3E-202 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 C3497_00205 2ae50c5cbee83607d81b1118150dd2b2 404 Pfam PF03116 NQR2, RnfD, RnfE family 41 395 7.7E-111 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 C3497_00205 2ae50c5cbee83607d81b1118150dd2b2 404 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 402 37.421 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 C3497_06775 8d3e2b41c803a566bbe1a929dd53b66d 307 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 293 4.3E-83 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 C3497_06775 8d3e2b41c803a566bbe1a929dd53b66d 307 SUPERFAMILY SSF51735 1 157 8.2E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_06775 8d3e2b41c803a566bbe1a929dd53b66d 307 SUPERFAMILY SSF48179 172 293 1.97E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_06775 8d3e2b41c803a566bbe1a929dd53b66d 307 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 149 3.4E-40 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain C3497_06775 8d3e2b41c803a566bbe1a929dd53b66d 307 Gene3D G3DSA:1.10.1040.10 171 295 2.4E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C3497_06775 8d3e2b41c803a566bbe1a929dd53b66d 307 Gene3D G3DSA:3.40.50.720 2 170 2.7E-61 T 14-10-2018 C3497_06775 8d3e2b41c803a566bbe1a929dd53b66d 307 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 171 293 3.5E-33 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 SUPERFAMILY SSF52317 1 187 8.46E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.4E-7 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.4E-7 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-37 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-37 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00097 Anthranilate synthase component II signature 164 177 3.7E-37 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-37 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-37 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-37 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 6.3E-14 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.3E-14 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 6.3E-14 T 14-10-2018 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 Pfam PF00117 Glutamine amidotransferase class-I 4 186 4.6E-58 T 14-10-2018 IPR017926 Glutamine amidotransferase C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 4.3E-83 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_10625 a3ee6dc3401c07eccc7b3c0050ffe4bf 193 Gene3D G3DSA:3.40.50.880 2 192 2.4E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_03535 8adf6260d0c5e2a26bdb30738cc25295 203 SUPERFAMILY SSF46626 23 101 3.2E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_03535 8adf6260d0c5e2a26bdb30738cc25295 203 Pfam PF00034 Cytochrome c 133 198 8.1E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_03535 8adf6260d0c5e2a26bdb30738cc25295 203 Pfam PF00034 Cytochrome c 27 99 5.3E-7 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_03535 8adf6260d0c5e2a26bdb30738cc25295 203 PIRSF PIRSF000005 1 203 1.8E-64 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 C3497_03535 8adf6260d0c5e2a26bdb30738cc25295 203 Gene3D G3DSA:1.10.760.10 108 203 1.8E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_03535 8adf6260d0c5e2a26bdb30738cc25295 203 Gene3D G3DSA:1.10.760.10 27 104 1.4E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_03535 8adf6260d0c5e2a26bdb30738cc25295 203 SUPERFAMILY SSF46626 112 201 3.49E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_12275 cfa05659d3a3cb3c826b25fe5a892ff4 368 Pfam PF11906 Protein of unknown function (DUF3426) 220 364 3.9E-45 T 14-10-2018 IPR021834 Protein of unknown function DUF3426 C3497_12275 cfa05659d3a3cb3c826b25fe5a892ff4 368 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 2 38 1.2E-14 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative C3497_12275 cfa05659d3a3cb3c826b25fe5a892ff4 368 Pfam PF13717 zinc-ribbon domain 2 37 8.3E-12 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative C3497_05585 485b9ea6fe63863c889e1dc5de9d6097 549 SUPERFAMILY SSF53649 245 532 5.4E-23 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 C3497_05585 485b9ea6fe63863c889e1dc5de9d6097 549 Pfam PF00884 Sulfatase 245 528 1.6E-45 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 C3497_05585 485b9ea6fe63863c889e1dc5de9d6097 549 Gene3D G3DSA:3.40.720.10 231 548 6.5E-81 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 C3497_05585 485b9ea6fe63863c889e1dc5de9d6097 549 Pfam PF08019 Domain of unknown function (DUF1705) 65 211 2.5E-32 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 Gene3D G3DSA:3.30.450.20 46 185 2.8E-16 T 14-10-2018 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 58 182 2.2E-12 T 14-10-2018 IPR000014 PAS domain C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 SMART SM00387 339 449 6.6E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 SMART SM00388 204 299 3.9E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 Pfam PF08448 PAS fold 67 177 3.2E-12 T 14-10-2018 IPR013656 PAS fold-4 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 SUPERFAMILY SSF55874 285 447 3.01E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 SMART SM00091 61 126 2.7E-6 T 14-10-2018 IPR000014 PAS domain C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 1.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 1.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 1.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 1.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 Gene3D G3DSA:3.30.565.10 300 450 6.1E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 SUPERFAMILY SSF55785 50 169 3.14E-18 T 14-10-2018 IPR035965 PAS domain superfamily C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 Gene3D G3DSA:1.10.287.130 186 294 2.0E-25 T 14-10-2018 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 204 279 8.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 SUPERFAMILY SSF47384 199 245 1.82E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_00595 d8d80f0568db74709b3c33dc2d5129b6 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 447 3.9E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_04090 52a4f6d7f38173408fc1b7000c9c12ff 403 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_04090 52a4f6d7f38173408fc1b7000c9c12ff 403 PIRSF PIRSF001413 1 403 8.5E-164 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_04090 52a4f6d7f38173408fc1b7000c9c12ff 403 Gene3D G3DSA:3.40.50.1100 18 214 2.8E-188 T 14-10-2018 C3497_04090 52a4f6d7f38173408fc1b7000c9c12ff 403 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 399 52.902 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_04090 52a4f6d7f38173408fc1b7000c9c12ff 403 Gene3D G3DSA:3.40.50.1100 62 392 2.8E-188 T 14-10-2018 C3497_04090 52a4f6d7f38173408fc1b7000c9c12ff 403 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 398 1.6E-192 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_04090 52a4f6d7f38173408fc1b7000c9c12ff 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 386 1.5E-50 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3497_04090 52a4f6d7f38173408fc1b7000c9c12ff 403 SUPERFAMILY SSF53686 11 397 1.2E-152 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3497_13155 731058c8c94293f27dbb99631270601c 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 9.7E-82 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 C3497_13155 731058c8c94293f27dbb99631270601c 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 3.8E-35 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 C3497_13155 731058c8c94293f27dbb99631270601c 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 2.5E-40 T 14-10-2018 IPR013527 YicC-like, N-terminal C3497_02865 65090f3dda3f06b6a305fc8b1d856f50 430 Gene3D G3DSA:1.10.10.10 368 424 9.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_02865 65090f3dda3f06b6a305fc8b1d856f50 430 SUPERFAMILY SSF52172 345 418 3.78E-18 T 14-10-2018 IPR011006 CheY-like superfamily C3497_02865 65090f3dda3f06b6a305fc8b1d856f50 430 SMART SM01012 365 420 1.2E-23 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 C3497_02865 65090f3dda3f06b6a305fc8b1d856f50 430 Pfam PF08376 Nitrate and nitrite sensing 35 278 3.0E-48 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein C3497_02865 65090f3dda3f06b6a305fc8b1d856f50 430 Pfam PF03861 ANTAR domain 369 418 1.3E-19 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 C3497_05030 4b5d0d5ebe5bf53b4a383547aab8ac24 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_05030 4b5d0d5ebe5bf53b4a383547aab8ac24 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_05030 4b5d0d5ebe5bf53b4a383547aab8ac24 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_05030 4b5d0d5ebe5bf53b4a383547aab8ac24 90 SMART SM00411 1 90 8.4E-39 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_05030 4b5d0d5ebe5bf53b4a383547aab8ac24 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 C3497_05030 4b5d0d5ebe5bf53b4a383547aab8ac24 90 Gene3D G3DSA:4.10.520.10 1 90 2.7E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3497_05030 4b5d0d5ebe5bf53b4a383547aab8ac24 90 SUPERFAMILY SSF47729 1 90 1.62E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3497_05030 4b5d0d5ebe5bf53b4a383547aab8ac24 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.7E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_14295 994a80d1abe67f894a737baebfd1269c 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.6E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C3497_14295 994a80d1abe67f894a737baebfd1269c 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.6E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C3497_14295 994a80d1abe67f894a737baebfd1269c 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.6E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C3497_14295 994a80d1abe67f894a737baebfd1269c 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.3E-32 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C3497_14295 994a80d1abe67f894a737baebfd1269c 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site C3497_14295 994a80d1abe67f894a737baebfd1269c 89 SUPERFAMILY SSF55594 1 88 2.49E-29 T 14-10-2018 IPR035895 HPr-like superfamily C3497_14295 994a80d1abe67f894a737baebfd1269c 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site C3497_14295 994a80d1abe67f894a737baebfd1269c 89 Gene3D G3DSA:3.30.1340.10 1 88 1.5E-31 T 14-10-2018 IPR035895 HPr-like superfamily C3497_14295 994a80d1abe67f894a737baebfd1269c 89 Pfam PF00381 PTS HPr component phosphorylation site 5 82 3.4E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C3497_11540 ed829e0a431c67d34be6d0415ab66fa3 281 Gene3D G3DSA:3.30.465.10 187 272 1.4E-29 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3497_11540 ed829e0a431c67d34be6d0415ab66fa3 281 SUPERFAMILY SSF56176 193 275 3.82E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3497_11540 ed829e0a431c67d34be6d0415ab66fa3 281 Pfam PF03471 Transporter associated domain 198 272 8.5E-22 T 14-10-2018 IPR005170 Transporter-associated domain C3497_11540 ed829e0a431c67d34be6d0415ab66fa3 281 Pfam PF00571 CBS domain 124 178 4.6E-6 T 14-10-2018 IPR000644 CBS domain C3497_11540 ed829e0a431c67d34be6d0415ab66fa3 281 Pfam PF00571 CBS domain 60 118 1.6E-4 T 14-10-2018 IPR000644 CBS domain C3497_11540 ed829e0a431c67d34be6d0415ab66fa3 281 Gene3D G3DSA:3.10.580.10 40 186 1.4E-50 T 14-10-2018 C3497_11540 ed829e0a431c67d34be6d0415ab66fa3 281 SMART SM01091 195 273 6.2E-29 T 14-10-2018 IPR005170 Transporter-associated domain C3497_11540 ed829e0a431c67d34be6d0415ab66fa3 281 SUPERFAMILY SSF54631 49 187 3.41E-30 T 14-10-2018 C3497_07845 b5628191b098f4e98237a12720dd50eb 304 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 304 4.9E-126 T 14-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B C3497_07845 b5628191b098f4e98237a12720dd50eb 304 Pfam PF12706 Beta-lactamase superfamily domain 50 271 2.1E-48 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_07845 b5628191b098f4e98237a12720dd50eb 304 SUPERFAMILY SSF56281 1 304 7.94E-59 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_07845 b5628191b098f4e98237a12720dd50eb 304 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 304 169.523 T 14-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B C3497_07845 b5628191b098f4e98237a12720dd50eb 304 Gene3D G3DSA:3.60.15.10 1 304 8.3E-89 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 238 248 1.1E-28 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 48 57 1.1E-28 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 108 120 1.1E-28 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 182 1.1E-28 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 120 134 1.1E-28 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.1E-28 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 52 248 1.4E-86 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 177 192 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 Pfam PF00813 FliP family 52 244 8.5E-78 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 225 237 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 89 108 4.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 4.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 69 89 4.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 177 197 4.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 222 247 4.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 C3497_09290 b5347b096827e1342229a52ac6544bd7 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 198 219 4.1E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 C3497_13565 fe93d8fb20090809b0c63d4c0417622e 382 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_13565 fe93d8fb20090809b0c63d4c0417622e 382 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 28 380 2.2E-107 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 C3497_13565 fe93d8fb20090809b0c63d4c0417622e 382 Gene3D G3DSA:3.40.50.300 33 254 1.8E-57 T 14-10-2018 C3497_13565 fe93d8fb20090809b0c63d4c0417622e 382 Pfam PF00005 ABC transporter 41 182 7.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_13565 fe93d8fb20090809b0c63d4c0417622e 382 SUPERFAMILY SSF52540 30 252 7.73E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13565 fe93d8fb20090809b0c63d4c0417622e 382 Pfam PF03459 TOBE domain 319 380 1.1E-11 T 14-10-2018 IPR005116 Transport-associated OB, type 1 C3497_13565 fe93d8fb20090809b0c63d4c0417622e 382 Gene3D G3DSA:2.40.50.100 317 381 1.3E-13 T 14-10-2018 C3497_13565 fe93d8fb20090809b0c63d4c0417622e 382 SUPERFAMILY SSF50331 267 380 5.83E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal C3497_13565 fe93d8fb20090809b0c63d4c0417622e 382 SMART SM00382 47 232 3.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_03180 cab88ca163a695f2496926a049e553b6 143 SUPERFAMILY SSF54427 8 128 1.15E-33 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3497_03180 cab88ca163a695f2496926a049e553b6 143 Gene3D G3DSA:3.10.450.50 1 143 4.6E-44 T 14-10-2018 C3497_03180 cab88ca163a695f2496926a049e553b6 143 Pfam PF13474 SnoaL-like domain 14 126 1.3E-22 T 14-10-2018 IPR037401 SnoaL-like domain C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 SUPERFAMILY SSF82866 839 1077 5.1E-49 T 14-10-2018 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 Pfam PF00873 AcrB/AcrD/AcrF family 52 1074 9.2E-235 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 SUPERFAMILY SSF82714 224 305 6.15E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 SUPERFAMILY SSF82693 87 169 1.8E-20 T 14-10-2018 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 Gene3D G3DSA:3.30.70.1430 83 850 1.5E-262 T 14-10-2018 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 SUPERFAMILY SSF82714 755 840 4.05E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 Gene3D G3DSA:3.30.70.1440 703 900 1.5E-262 T 14-10-2018 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 Gene3D G3DSA:1.20.1640.10 549 1070 1.5E-262 T 14-10-2018 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 PRINTS PR00702 Acriflavin resistance protein family signature 511 534 1.4E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 PRINTS PR00702 Acriflavin resistance protein family signature 372 395 1.4E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 PRINTS PR00702 Acriflavin resistance protein family signature 81 99 1.4E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 PRINTS PR00702 Acriflavin resistance protein family signature 399 420 1.4E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 PRINTS PR00702 Acriflavin resistance protein family signature 427 451 1.4E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 PRINTS PR00702 Acriflavin resistance protein family signature 53 77 1.4E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 SUPERFAMILY SSF82866 332 538 1.16E-39 T 14-10-2018 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 SUPERFAMILY SSF82693 178 366 1.1E-19 T 14-10-2018 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 Gene3D G3DSA:1.20.1640.10 55 548 1.5E-262 T 14-10-2018 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 43 1085 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 Gene3D G3DSA:3.30.2090.10 220 310 1.5E-262 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 Gene3D G3DSA:3.30.70.1430 600 702 1.5E-262 T 14-10-2018 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 Gene3D G3DSA:3.30.70.1320 176 368 1.5E-262 T 14-10-2018 C3497_10970 fdad6caf17201974eaad813699f7ce99 1096 Gene3D G3DSA:3.30.2090.10 754 842 1.5E-262 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 Gene3D G3DSA:3.30.540.10 1 141 3.3E-50 T 14-10-2018 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 SUPERFAMILY SSF56655 1 263 4.32E-90 T 14-10-2018 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 Gene3D G3DSA:3.40.190.80 142 264 6.6E-40 T 14-10-2018 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.9E-63 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 6.9E-63 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.9E-63 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 6.9E-63 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 6.9E-63 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 6.9E-63 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 212 226 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 Pfam PF00459 Inositol monophosphatase family 2 252 2.7E-66 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 6.8E-30 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 157 183 6.8E-30 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 6.8E-30 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 C3497_06900 842fb3eaf061298e0a1a2797df605b11 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 199 211 6.8E-30 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 C3497_02840 f95b6493b65767a08937c05cea669a6c 436 Gene3D G3DSA:1.10.300.10 102 202 2.0E-94 T 14-10-2018 C3497_02840 f95b6493b65767a08937c05cea669a6c 436 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3497_02840 f95b6493b65767a08937c05cea669a6c 436 Gene3D G3DSA:3.90.170.10 268 436 1.5E-66 T 14-10-2018 C3497_02840 f95b6493b65767a08937c05cea669a6c 436 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 432 6.5E-167 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3497_02840 f95b6493b65767a08937c05cea669a6c 436 Gene3D G3DSA:3.40.440.10 6 250 2.0E-94 T 14-10-2018 C3497_02840 f95b6493b65767a08937c05cea669a6c 436 SMART SM00788 4 429 1.3E-283 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3497_02840 f95b6493b65767a08937c05cea669a6c 436 SUPERFAMILY SSF52540 3 434 3.93E-169 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02840 f95b6493b65767a08937c05cea669a6c 436 Pfam PF00709 Adenylosuccinate synthetase 5 428 1.6E-171 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3497_02840 f95b6493b65767a08937c05cea669a6c 436 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 436 205.095 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3497_02840 f95b6493b65767a08937c05cea669a6c 436 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 134 145 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3497_14595 25fa1339b9352d9af8b9c512d6b9177e 550 Pfam PF01676 Metalloenzyme superfamily 14 534 5.1E-68 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 C3497_14595 25fa1339b9352d9af8b9c512d6b9177e 550 Gene3D G3DSA:3.40.1450.10 87 331 1.5E-181 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_14595 25fa1339b9352d9af8b9c512d6b9177e 550 SUPERFAMILY SSF64158 87 324 4.32E-63 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_14595 25fa1339b9352d9af8b9c512d6b9177e 550 Gene3D G3DSA:3.40.720.10 14 535 1.5E-181 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 C3497_14595 25fa1339b9352d9af8b9c512d6b9177e 550 SUPERFAMILY SSF53649 14 540 6.15E-51 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 C3497_14595 25fa1339b9352d9af8b9c512d6b9177e 550 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 14 535 1.5E-127 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_14595 25fa1339b9352d9af8b9c512d6b9177e 550 PIRSF PIRSF001492 8 547 1.3E-166 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_14595 25fa1339b9352d9af8b9c512d6b9177e 550 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 93 315 2.4E-63 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3497_13370 0225b326358f183e76d1a5ca4a427cbb 227 Gene3D G3DSA:3.40.1550.10 12 176 2.6E-18 T 14-10-2018 IPR028976 CheC-like superfamily C3497_13370 0225b326358f183e76d1a5ca4a427cbb 227 Pfam PF11813 Protein of unknown function (DUF3334) 8 227 1.1E-118 T 14-10-2018 IPR024513 Protein of unknown function DUF3334 C3497_13370 0225b326358f183e76d1a5ca4a427cbb 227 SUPERFAMILY SSF103039 13 175 3.66E-23 T 14-10-2018 IPR028976 CheC-like superfamily C3497_07185 e16aeb9816cf145bb4bf276a62e7bb2f 368 Gene3D G3DSA:1.10.530.10 71 217 2.5E-31 T 14-10-2018 C3497_07185 e16aeb9816cf145bb4bf276a62e7bb2f 368 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 93 121 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 C3497_07185 e16aeb9816cf145bb4bf276a62e7bb2f 368 SMART SM00257 301 345 7.1E-4 T 14-10-2018 IPR018392 LysM domain C3497_07185 e16aeb9816cf145bb4bf276a62e7bb2f 368 Pfam PF01476 LysM domain 302 345 6.0E-5 T 14-10-2018 IPR018392 LysM domain C3497_07185 e16aeb9816cf145bb4bf276a62e7bb2f 368 SUPERFAMILY SSF54106 299 345 3.66E-7 T 14-10-2018 C3497_07185 e16aeb9816cf145bb4bf276a62e7bb2f 368 Pfam PF01464 Transglycosylase SLT domain 85 182 3.9E-24 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3497_07185 e16aeb9816cf145bb4bf276a62e7bb2f 368 Gene3D G3DSA:3.10.350.10 245 290 7.1E-10 T 14-10-2018 IPR036779 LysM domain superfamily C3497_07185 e16aeb9816cf145bb4bf276a62e7bb2f 368 SUPERFAMILY SSF53955 72 232 8.13E-43 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_07185 e16aeb9816cf145bb4bf276a62e7bb2f 368 Gene3D G3DSA:3.10.350.10 291 345 7.1E-10 T 14-10-2018 IPR036779 LysM domain superfamily C3497_09045 f5c44681575b95d88c0cd7cd94141819 369 Pfam PF00005 ABC transporter 19 161 7.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_09045 f5c44681575b95d88c0cd7cd94141819 369 Gene3D G3DSA:2.40.50.940 222 348 8.4E-8 T 14-10-2018 C3497_09045 f5c44681575b95d88c0cd7cd94141819 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_09045 f5c44681575b95d88c0cd7cd94141819 369 Pfam PF08402 TOBE domain 273 349 5.3E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 C3497_09045 f5c44681575b95d88c0cd7cd94141819 369 SUPERFAMILY SSF52540 5 240 5.32E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09045 f5c44681575b95d88c0cd7cd94141819 369 SMART SM00382 28 211 5.2E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_09045 f5c44681575b95d88c0cd7cd94141819 369 Gene3D G3DSA:2.40.50.140 278 343 8.4E-8 T 14-10-2018 C3497_09045 f5c44681575b95d88c0cd7cd94141819 369 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 2 348 5.0E-147 T 14-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 C3497_09045 f5c44681575b95d88c0cd7cd94141819 369 SUPERFAMILY SSF50331 238 351 1.19E-11 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal C3497_09045 f5c44681575b95d88c0cd7cd94141819 369 Gene3D G3DSA:3.40.50.300 4 221 1.4E-69 T 14-10-2018 C3497_13290 f820e6e09a9aa64ff0389c8d41bbefd2 157 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 6.4E-36 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 C3497_13290 f820e6e09a9aa64ff0389c8d41bbefd2 157 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 4.5E-26 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 C3497_13290 f820e6e09a9aa64ff0389c8d41bbefd2 157 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 11.909 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 C3497_01080 94b7aa1820f1838137233244fd6e4da7 396 SUPERFAMILY SSF53901 5 273 1.13E-82 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_01080 94b7aa1820f1838137233244fd6e4da7 396 Pfam PF02803 Thiolase, C-terminal domain 274 394 5.6E-43 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3497_01080 94b7aa1820f1838137233244fd6e4da7 396 PIRSF PIRSF000429 1 396 1.9E-115 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3497_01080 94b7aa1820f1838137233244fd6e4da7 396 Pfam PF00108 Thiolase, N-terminal domain 5 266 1.6E-87 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3497_01080 94b7aa1820f1838137233244fd6e4da7 396 SUPERFAMILY SSF53901 274 394 9.92E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_01080 94b7aa1820f1838137233244fd6e4da7 396 Gene3D G3DSA:3.40.47.10 127 392 1.4E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_01080 94b7aa1820f1838137233244fd6e4da7 396 ProSitePatterns PS00099 Thiolases active site. 377 390 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3497_01080 94b7aa1820f1838137233244fd6e4da7 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 394 5.0E-129 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3497_01080 94b7aa1820f1838137233244fd6e4da7 396 Gene3D G3DSA:3.40.47.10 6 279 1.4E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_09740 4945826174811b3dc711932f50f053af 109 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 9 98 4.7E-12 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C3497_09740 4945826174811b3dc711932f50f053af 109 Gene3D G3DSA:3.30.2310.20 1 103 1.1E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3497_12690 a2b8fda1b533247a032bed5bf614f23b 240 SUPERFAMILY SSF46785 2 67 4.68E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_12690 a2b8fda1b533247a032bed5bf614f23b 240 Pfam PF01614 Bacterial transcriptional regulator 113 233 6.7E-30 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal C3497_12690 a2b8fda1b533247a032bed5bf614f23b 240 SMART SM00346 2 84 3.2E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 C3497_12690 a2b8fda1b533247a032bed5bf614f23b 240 Gene3D G3DSA:3.30.450.40 66 240 6.2E-56 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_12690 a2b8fda1b533247a032bed5bf614f23b 240 Gene3D G3DSA:1.10.10.10 1 65 8.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_12690 a2b8fda1b533247a032bed5bf614f23b 240 Pfam PF09339 IclR helix-turn-helix domain 2 47 2.1E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 C3497_12690 a2b8fda1b533247a032bed5bf614f23b 240 SUPERFAMILY SSF55781 52 237 6.15E-49 T 14-10-2018 C3497_04685 9c57ccc65ae540ff15416f37eb2b01dc 331 SUPERFAMILY SSF50129 4 146 1.08E-40 T 14-10-2018 IPR011032 GroES-like superfamily C3497_04685 9c57ccc65ae540ff15416f37eb2b01dc 331 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 329 5.0E-139 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI C3497_04685 9c57ccc65ae540ff15416f37eb2b01dc 331 SMART SM00829 20 327 1.3E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C3497_04685 9c57ccc65ae540ff15416f37eb2b01dc 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 2.5E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C3497_04685 9c57ccc65ae540ff15416f37eb2b01dc 331 Pfam PF00107 Zinc-binding dehydrogenase 162 275 1.1E-12 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C3497_04685 9c57ccc65ae540ff15416f37eb2b01dc 331 Gene3D G3DSA:3.40.50.720 129 297 1.6E-120 T 14-10-2018 C3497_04685 9c57ccc65ae540ff15416f37eb2b01dc 331 Gene3D G3DSA:3.90.180.10 21 328 1.6E-120 T 14-10-2018 C3497_04685 9c57ccc65ae540ff15416f37eb2b01dc 331 SUPERFAMILY SSF51735 119 295 2.84E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_02870 09eb5f6ad54f48058572031bd9aec060 466 SUPERFAMILY SSF53850 46 303 9.96E-31 T 14-10-2018 C3497_02870 09eb5f6ad54f48058572031bd9aec060 466 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 39 0.001 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal C3497_02870 09eb5f6ad54f48058572031bd9aec060 466 Pfam PF13379 NMT1-like family 45 307 8.2E-104 T 14-10-2018 C3497_02870 09eb5f6ad54f48058572031bd9aec060 466 Gene3D G3DSA:3.40.190.10 50 437 4.5E-158 T 14-10-2018 C3497_02870 09eb5f6ad54f48058572031bd9aec060 466 Gene3D G3DSA:3.40.190.10 136 442 4.5E-158 T 14-10-2018 C3497_04860 8e6227320564225c984b3f3c3dd99b3b 345 Gene3D G3DSA:3.20.20.100 1 345 1.4E-123 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C3497_04860 8e6227320564225c984b3f3c3dd99b3b 345 Pfam PF00248 Aldo/keto reductase family 16 334 1.0E-72 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain C3497_04860 8e6227320564225c984b3f3c3dd99b3b 345 SUPERFAMILY SSF51430 1 340 2.36E-106 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C3497_06290 9974fad901171546d4e9bb44a44e2a17 67 Gene3D G3DSA:3.30.70.20 3 66 7.8E-19 T 14-10-2018 C3497_06290 9974fad901171546d4e9bb44a44e2a17 67 SUPERFAMILY SSF54862 6 61 5.59E-15 T 14-10-2018 C3497_06290 9974fad901171546d4e9bb44a44e2a17 67 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_06290 9974fad901171546d4e9bb44a44e2a17 67 Pfam PF13237 4Fe-4S dicluster domain 5 56 5.5E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_02200 78eb6c83a5939f5541028e783dabf2ed 188 Gene3D G3DSA:3.40.1740.10 4 188 8.0E-69 T 14-10-2018 C3497_02200 78eb6c83a5939f5541028e783dabf2ed 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 7.0E-48 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 C3497_02200 78eb6c83a5939f5541028e783dabf2ed 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 38.214 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 C3497_02200 78eb6c83a5939f5541028e783dabf2ed 188 SUPERFAMILY SSF143456 7 188 7.33E-66 T 14-10-2018 C3497_12145 a20a8c27de25bd5f8e5f923bbb36c9e0 362 Pfam PF00953 Glycosyl transferase family 4 99 285 3.3E-33 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 C3497_12145 a20a8c27de25bd5f8e5f923bbb36c9e0 362 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 360 23.984 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12145 a20a8c27de25bd5f8e5f923bbb36c9e0 362 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.3E-5 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12145 a20a8c27de25bd5f8e5f923bbb36c9e0 362 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 362 6.4E-131 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12145 a20a8c27de25bd5f8e5f923bbb36c9e0 362 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12145 a20a8c27de25bd5f8e5f923bbb36c9e0 362 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12220 68faf54686d19e6a4277c4b6db9ab9b3 148 Gene3D G3DSA:1.10.1510.10 1 90 4.9E-27 T 14-10-2018 C3497_12220 68faf54686d19e6a4277c4b6db9ab9b3 148 Gene3D G3DSA:1.10.10.410 91 147 3.7E-16 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal C3497_12220 68faf54686d19e6a4277c4b6db9ab9b3 148 SUPERFAMILY SSF89095 1 146 8.37E-39 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 C3497_12220 68faf54686d19e6a4277c4b6db9ab9b3 148 Pfam PF09424 Yqey-like protein 4 146 5.6E-51 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 Gene3D G3DSA:3.40.50.10930 5 295 5.0E-65 T 14-10-2018 C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 PIRSF PIRSF000980 1 1120 9.9E-300 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 Gene3D G3DSA:1.10.486.10 426 630 1.4E-130 T 14-10-2018 C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 Gene3D G3DSA:1.10.10.160 78 192 5.0E-65 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 Gene3D G3DSA:3.40.50.300 316 773 1.4E-130 T 14-10-2018 C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 SUPERFAMILY SSF52980 816 1114 8.04E-59 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 SUPERFAMILY SSF52540 335 760 4.25E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 SUPERFAMILY SSF52540 1 328 2.39E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1117 17.379 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 772 1.1E-230 T 14-10-2018 C3497_14520 a66f1ee89015b63a6864a460544cbd67 1120 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 793 6.3E-191 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 C3497_05925 03b89977381bc4b71fa4dd4c504ff705 284 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 204 221 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site C3497_05925 03b89977381bc4b71fa4dd4c504ff705 284 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 232 9.5E-9 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C3497_05925 03b89977381bc4b71fa4dd4c504ff705 284 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 280 2.6E-114 T 14-10-2018 IPR022522 Flagellar motor stator, MotA C3497_08760 a8456b38b59e38a3e5e71a4a56065b29 283 Pfam PF00293 NUDIX domain 139 257 1.8E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3497_08760 a8456b38b59e38a3e5e71a4a56065b29 283 Gene3D G3DSA:3.90.79.10 135 273 5.2E-56 T 14-10-2018 C3497_08760 a8456b38b59e38a3e5e71a4a56065b29 283 Pfam PF15916 Domain of unknown function (DUF4743) 38 136 1.1E-6 T 14-10-2018 IPR031804 Domain of unknown function DUF4743 C3497_08760 a8456b38b59e38a3e5e71a4a56065b29 283 SUPERFAMILY SSF55811 116 277 4.2E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3497_08760 a8456b38b59e38a3e5e71a4a56065b29 283 Gene3D G3DSA:3.30.750.160 39 219 5.2E-56 T 14-10-2018 C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 SUPERFAMILY SSF47757 58 132 7.59E-21 T 14-10-2018 C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 Pfam PF03705 CheR methyltransferase, all-alpha domain 68 120 1.3E-17 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 Pfam PF01739 CheR methyltransferase, SAM binding domain 133 325 1.3E-55 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 SUPERFAMILY SSF53335 133 326 7.96E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 Gene3D G3DSA:1.10.155.10 55 131 1.5E-25 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 PRINTS PR00996 Glutamate methyltransferase family signature 163 183 2.4E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 PRINTS PR00996 Glutamate methyltransferase family signature 197 213 2.4E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 PRINTS PR00996 Glutamate methyltransferase family signature 269 283 2.4E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 PRINTS PR00996 Glutamate methyltransferase family signature 288 311 2.4E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 PRINTS PR00996 Glutamate methyltransferase family signature 89 102 2.4E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 PRINTS PR00996 Glutamate methyltransferase family signature 126 138 2.4E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 SMART SM00138 67 329 2.9E-94 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 PIRSF PIRSF000410 52 330 2.0E-94 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR C3497_05950 8a3a2134a0e6af2cddbd247327d23bc9 334 Gene3D G3DSA:3.40.50.150 132 329 2.5E-61 T 14-10-2018 C3497_14075 75b3b0caf2428c4ee8bd5e17bb9e661e 181 Gene3D G3DSA:1.10.520.40 1 175 1.1E-47 T 14-10-2018 IPR038287 Cse2 superfamily C3497_14075 75b3b0caf2428c4ee8bd5e17bb9e661e 181 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 5 163 2.0E-25 T 14-10-2018 IPR013382 CRISPR-associated protein Cse2 C3497_14075 75b3b0caf2428c4ee8bd5e17bb9e661e 181 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 19 161 3.6E-32 T 14-10-2018 IPR013382 CRISPR-associated protein Cse2 C3497_00900 032eca1c4e426107e60fe9c1713017de 607 Gene3D G3DSA:2.60.40.1250 20 154 8.3E-31 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily C3497_00900 032eca1c4e426107e60fe9c1713017de 607 Gene3D G3DSA:3.40.30.10 482 605 4.9E-28 T 14-10-2018 C3497_00900 032eca1c4e426107e60fe9c1713017de 607 Pfam PF11412 Disulphide bond corrector protein DsbC 28 142 1.1E-23 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain C3497_00900 032eca1c4e426107e60fe9c1713017de 607 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 4 606 34.452 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 C3497_00900 032eca1c4e426107e60fe9c1713017de 607 SUPERFAMILY SSF74863 27 143 3.14E-28 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily C3497_00900 032eca1c4e426107e60fe9c1713017de 607 Pfam PF13899 Thioredoxin-like 504 579 8.5E-11 T 14-10-2018 C3497_00900 032eca1c4e426107e60fe9c1713017de 607 ProSitePatterns PS00194 Thioredoxin family active site. 514 532 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3497_00900 032eca1c4e426107e60fe9c1713017de 607 SUPERFAMILY SSF52833 500 603 1.5E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_00900 032eca1c4e426107e60fe9c1713017de 607 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 200 406 2.0E-15 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 C3497_14665 4a6631093346fd365f8a92300724d9e6 627 Gene3D G3DSA:3.90.1310.10 62 245 1.0E-45 T 14-10-2018 C3497_14665 4a6631093346fd365f8a92300724d9e6 627 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 234 2.6E-42 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 C3497_14665 4a6631093346fd365f8a92300724d9e6 627 SUPERFAMILY SSF56519 53 250 6.67E-49 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 C3497_14665 4a6631093346fd365f8a92300724d9e6 627 SUPERFAMILY SSF56601 251 608 5.63E-104 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3497_14665 4a6631093346fd365f8a92300724d9e6 627 Gene3D G3DSA:3.40.710.10 246 614 1.3E-104 T 14-10-2018 C3497_14665 4a6631093346fd365f8a92300724d9e6 627 Gene3D G3DSA:3.30.1390.30 82 157 1.0E-45 T 14-10-2018 C3497_14665 4a6631093346fd365f8a92300724d9e6 627 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 605 1.3E-79 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C3497_14665 4a6631093346fd365f8a92300724d9e6 627 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 612 49.638 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_14665 4a6631093346fd365f8a92300724d9e6 627 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 16 608 1.1E-234 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 Hamap MF_01961 Catalase-peroxidase [katG]. 2 719 39.669 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 PRINTS PR00458 Haem peroxidase superfamily signature 85 99 8.2E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 PRINTS PR00458 Haem peroxidase superfamily signature 254 269 8.2E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 PRINTS PR00458 Haem peroxidase superfamily signature 313 328 8.2E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 PRINTS PR00458 Haem peroxidase superfamily signature 163 175 8.2E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 PRINTS PR00458 Haem peroxidase superfamily signature 145 162 8.2E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 SUPERFAMILY SSF48113 427 718 8.1E-108 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 Gene3D G3DSA:1.10.520.10 428 718 1.8E-143 T 14-10-2018 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 5 719 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 ProSitePatterns PS00436 Peroxidases active site signature. 85 96 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 Gene3D G3DSA:1.10.520.10 23 427 1.5E-218 T 14-10-2018 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 Gene3D G3DSA:1.10.420.20 186 392 1.5E-218 T 14-10-2018 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 SUPERFAMILY SSF48113 12 426 1.02E-153 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 Gene3D G3DSA:1.10.420.10 573 694 1.8E-143 T 14-10-2018 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 47 60 4.2E-50 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 473 499 4.2E-50 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 62 87 4.2E-50 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 262 285 4.2E-50 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 21 43 4.2E-50 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 Pfam PF00141 Peroxidase 401 693 2.4E-36 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 C3497_08810 a51be16e1a0feab201f7260d739d796d 719 Pfam PF00141 Peroxidase 64 393 2.0E-53 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 C3497_02260 475eabf05d782429ae21e0978fe78c3d 238 Gene3D G3DSA:3.40.30.10 110 236 1.1E-35 T 14-10-2018 C3497_02260 475eabf05d782429ae21e0978fe78c3d 238 SUPERFAMILY SSF52833 92 234 3.52E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_02260 475eabf05d782429ae21e0978fe78c3d 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 30 83 1.1E-13 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal C3497_02260 475eabf05d782429ae21e0978fe78c3d 238 SUPERFAMILY SSF54423 40 84 4.51E-6 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 C3497_02260 475eabf05d782429ae21e0978fe78c3d 238 ProSitePatterns PS00194 Thioredoxin family active site. 119 137 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3497_02260 475eabf05d782429ae21e0978fe78c3d 238 Pfam PF13098 Thioredoxin-like domain 112 233 3.1E-33 T 14-10-2018 IPR012336 Thioredoxin-like fold C3497_12790 05cf745d11aa34da380c023148b572b9 255 SUPERFAMILY SSF88713 24 209 5.68E-43 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 C3497_12790 05cf745d11aa34da380c023148b572b9 255 Gene3D G3DSA:3.20.20.370 1 230 2.0E-66 T 14-10-2018 C3497_12790 05cf745d11aa34da380c023148b572b9 255 Pfam PF01522 Polysaccharide deacetylase 61 197 2.7E-31 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 C3497_02140 77f38304db476a026319918369ce8e42 377 SUPERFAMILY SSF52540 7 344 2.37E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02140 77f38304db476a026319918369ce8e42 377 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 10 350 2.2E-138 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 C3497_02140 77f38304db476a026319918369ce8e42 377 Pfam PF00437 Type II/IV secretion system protein 121 253 2.0E-37 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_02140 77f38304db476a026319918369ce8e42 377 Gene3D G3DSA:3.30.450.90 2 107 3.3E-30 T 14-10-2018 C3497_02140 77f38304db476a026319918369ce8e42 377 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 200 214 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3497_02140 77f38304db476a026319918369ce8e42 377 Gene3D G3DSA:3.40.50.300 108 366 6.9E-88 T 14-10-2018 C3497_14240 8b903656bf7f105c6553e0c3c719e689 414 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 8.7E-22 T 14-10-2018 C3497_14240 8b903656bf7f105c6553e0c3c719e689 414 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 119 143 8.7E-22 T 14-10-2018 C3497_14240 8b903656bf7f105c6553e0c3c719e689 414 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 86 98 8.7E-22 T 14-10-2018 C3497_14240 8b903656bf7f105c6553e0c3c719e689 414 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 19 35 8.7E-22 T 14-10-2018 C3497_14240 8b903656bf7f105c6553e0c3c719e689 414 SUPERFAMILY SSF53335 17 200 1.91E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_14240 8b903656bf7f105c6553e0c3c719e689 414 Gene3D G3DSA:3.40.50.150 21 203 5.4E-37 T 14-10-2018 C3497_14240 8b903656bf7f105c6553e0c3c719e689 414 Pfam PF07669 Eco57I restriction-modification methylase 85 180 5.9E-8 T 14-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 C3497_14240 8b903656bf7f105c6553e0c3c719e689 414 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 89 95 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3497_05740 ba262f039ffd4d4907b4a610f5885000 157 Gene3D G3DSA:3.30.70.560 1 157 4.4E-52 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3497_05740 ba262f039ffd4d4907b4a610f5885000 157 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 4 132 1.1E-35 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3497_05740 ba262f039ffd4d4907b4a610f5885000 157 SUPERFAMILY SSF55083 2 141 2.09E-50 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3497_05740 ba262f039ffd4d4907b4a610f5885000 157 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 3 132 1.8E-41 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3497_10045 926550ad570afa7a2bb75d28510f8e2d 363 Pfam PF01883 Iron-sulfur cluster assembly protein 7 78 6.6E-25 T 14-10-2018 IPR002744 MIP18 family-like C3497_10045 926550ad570afa7a2bb75d28510f8e2d 363 Gene3D G3DSA:3.30.300.130 3 90 5.2E-11 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C3497_10045 926550ad570afa7a2bb75d28510f8e2d 363 SUPERFAMILY SSF52540 89 325 7.31E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10045 926550ad570afa7a2bb75d28510f8e2d 363 Gene3D G3DSA:3.40.50.300 91 340 4.9E-87 T 14-10-2018 C3497_10045 926550ad570afa7a2bb75d28510f8e2d 363 SUPERFAMILY SSF117916 1 84 2.03E-19 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C3497_10045 926550ad570afa7a2bb75d28510f8e2d 363 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 341 38.136 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein C3497_10045 926550ad570afa7a2bb75d28510f8e2d 363 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 340 1.0E-105 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 C3497_10045 926550ad570afa7a2bb75d28510f8e2d 363 ProSitePatterns PS01215 Mrp family signature. 204 220 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 C3497_09795 59a2d566ff25c175c3e739446ccca6d3 462 SMART SM00857 16 169 2.6E-61 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3497_09795 59a2d566ff25c175c3e739446ccca6d3 462 Gene3D G3DSA:1.10.10.2600 153 288 7.2E-27 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily C3497_09795 59a2d566ff25c175c3e739446ccca6d3 462 Pfam PF07508 Recombinase 190 285 2.3E-12 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 C3497_09795 59a2d566ff25c175c3e739446ccca6d3 462 Pfam PF00239 Resolvase, N terminal domain 17 169 4.5E-41 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3497_09795 59a2d566ff25c175c3e739446ccca6d3 462 Gene3D G3DSA:3.40.50.1390 12 152 3.2E-43 T 14-10-2018 C3497_09795 59a2d566ff25c175c3e739446ccca6d3 462 SUPERFAMILY SSF53041 14 169 9.16E-39 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 C3497_02655 3450971880648fa28c4bf078d02bc170 107 Pfam PF02699 Preprotein translocase subunit 21 96 1.1E-29 T 14-10-2018 IPR003849 Preprotein translocase YajC C3497_02655 3450971880648fa28c4bf078d02bc170 107 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 99 6.6E-29 T 14-10-2018 IPR003849 Preprotein translocase YajC C3497_02655 3450971880648fa28c4bf078d02bc170 107 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 1.8E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC C3497_02655 3450971880648fa28c4bf078d02bc170 107 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 1.8E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC C3497_02655 3450971880648fa28c4bf078d02bc170 107 SMART SM01323 17 99 1.0E-45 T 14-10-2018 IPR003849 Preprotein translocase YajC C3497_08285 1576336c5b7dc6603849b365180aaadc 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 266 2.3E-33 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3497_08285 1576336c5b7dc6603849b365180aaadc 354 Gene3D G3DSA:2.40.30.170 55 276 9.1E-81 T 14-10-2018 C3497_08285 1576336c5b7dc6603849b365180aaadc 354 SUPERFAMILY SSF111369 58 270 6.8E-45 T 14-10-2018 C3497_08285 1576336c5b7dc6603849b365180aaadc 354 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 347 2.4E-85 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_08285 1576336c5b7dc6603849b365180aaadc 354 Gene3D G3DSA:1.10.287.470 100 159 9.1E-81 T 14-10-2018 C3497_08285 1576336c5b7dc6603849b365180aaadc 354 Gene3D G3DSA:2.40.50.100 65 193 9.1E-81 T 14-10-2018 C3497_08285 1576336c5b7dc6603849b365180aaadc 354 Gene3D G3DSA:2.40.420.20 277 345 9.1E-81 T 14-10-2018 C3497_13700 aeed36f9f1ee5e42f0c533244c0e262d 203 SUPERFAMILY SSF100950 19 200 6.98E-46 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3497_13700 aeed36f9f1ee5e42f0c533244c0e262d 203 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 20 194 5.1E-24 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase C3497_13700 aeed36f9f1ee5e42f0c533244c0e262d 203 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 20 194 5.4E-39 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase C3497_13700 aeed36f9f1ee5e42f0c533244c0e262d 203 Gene3D G3DSA:3.40.50.10420 19 202 7.2E-43 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily C3497_13700 aeed36f9f1ee5e42f0c533244c0e262d 203 PIRSF PIRSF006806 15 197 1.2E-27 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase C3497_09680 9c85fa0edc27cb59399ca582b98d278b 166 Gene3D G3DSA:3.40.630.30 1 159 1.5E-41 T 14-10-2018 C3497_09680 9c85fa0edc27cb59399ca582b98d278b 166 SUPERFAMILY SSF55729 18 151 4.15E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_09680 9c85fa0edc27cb59399ca582b98d278b 166 Pfam PF00583 Acetyltransferase (GNAT) family 41 144 1.5E-10 T 14-10-2018 IPR000182 GNAT domain C3497_13755 c4fe5482dd9ecb7c362a80b90ee2c67d 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 149 7.0E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_13755 c4fe5482dd9ecb7c362a80b90ee2c67d 694 SUPERFAMILY SSF56935 13 653 3.02E-72 T 14-10-2018 C3497_13755 c4fe5482dd9ecb7c362a80b90ee2c67d 694 Pfam PF00593 TonB dependent receptor 223 648 7.9E-17 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_13755 c4fe5482dd9ecb7c362a80b90ee2c67d 694 Gene3D G3DSA:2.170.130.10 25 154 4.4E-27 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_10540 aa167bb4d8056a4541da5933184786aa 428 Gene3D G3DSA:1.20.1250.20 16 407 9.0E-13 T 14-10-2018 C3497_10540 aa167bb4d8056a4541da5933184786aa 428 Pfam PF13347 MFS/sugar transport protein 19 415 4.7E-53 T 14-10-2018 C3497_10540 aa167bb4d8056a4541da5933184786aa 428 SUPERFAMILY SSF103473 29 402 3.27E-22 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 SUPERFAMILY SSF54991 694 792 2.35E-27 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Gene3D G3DSA:3.30.56.10 7 180 2.8E-72 T 14-10-2018 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Gene3D G3DSA:2.40.50.140 39 154 2.8E-72 T 14-10-2018 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Gene3D G3DSA:3.50.40.10 199 394 7.2E-76 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.4E-17 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 SMART SM00874 403 471 1.2E-25 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 786 44.835 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Pfam PF01588 Putative tRNA binding domain 45 145 1.2E-27 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 SUPERFAMILY SSF46955 405 475 6.68E-18 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 SUPERFAMILY SSF56037 200 396 2.12E-72 T 14-10-2018 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 SMART SM00896 699 792 1.6E-36 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Gene3D G3DSA:3.30.930.10 486 689 3.3E-56 T 14-10-2018 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Pfam PF03147 Ferredoxin-fold anticodon binding domain 699 792 3.7E-26 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 SUPERFAMILY SSF50249 37 191 2.28E-50 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 792 1.6E-243 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Gene3D G3DSA:3.30.70.380 700 792 1.6E-26 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 SUPERFAMILY SSF55681 467 688 6.46E-48 T 14-10-2018 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Pfam PF03483 B3/4 domain 212 385 4.2E-69 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 SMART SM00873 212 385 1.9E-95 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 C3497_09480 f46916b5d15e6c59c51f7dc936f8a936 793 Gene3D G3DSA:3.30.56.10 404 476 1.4E-24 T 14-10-2018 C3497_03830 7baa3858b87e9650c6f3d1d209c4b374 269 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 9 264 38.706 T 14-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 C3497_03830 7baa3858b87e9650c6f3d1d209c4b374 269 Gene3D G3DSA:3.10.270.10 20 268 5.1E-103 T 14-10-2018 C3497_03830 7baa3858b87e9650c6f3d1d209c4b374 269 Pfam PF02649 Type I GTP cyclohydrolase folE2 9 259 2.2E-100 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 C3497_14260 ba86b8148742d260e2b974c781a3a448 458 SUPERFAMILY SSF46458 26 149 1.37E-16 T 14-10-2018 IPR009050 Globin-like superfamily C3497_14260 ba86b8148742d260e2b974c781a3a448 458 SMART SM00267 286 456 3.6E-62 T 14-10-2018 IPR000160 GGDEF domain C3497_14260 ba86b8148742d260e2b974c781a3a448 458 Pfam PF00990 Diguanylate cyclase, GGDEF domain 298 452 1.1E-46 T 14-10-2018 IPR000160 GGDEF domain C3497_14260 ba86b8148742d260e2b974c781a3a448 458 Gene3D G3DSA:3.30.70.270 298 458 1.2E-55 T 14-10-2018 C3497_14260 ba86b8148742d260e2b974c781a3a448 458 Gene3D G3DSA:1.10.490.10 2 153 4.8E-47 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 C3497_14260 ba86b8148742d260e2b974c781a3a448 458 SUPERFAMILY SSF55073 300 456 1.92E-49 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_14260 ba86b8148742d260e2b974c781a3a448 458 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 294 456 2.2E-53 T 14-10-2018 IPR000160 GGDEF domain C3497_14260 ba86b8148742d260e2b974c781a3a448 458 Pfam PF11563 Protoglobin 26 159 1.4E-12 T 14-10-2018 C3497_06140 1314665f55bba7f7043d66e158e355d6 105 PIRSF PIRSF005790 1 105 1.5E-32 T 14-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 C3497_06140 1314665f55bba7f7043d66e158e355d6 105 Hamap MF_00529 Nitrogenase-stabilizing/protective protein NifW [nifW]. 4 104 21.583 T 14-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 C3497_06140 1314665f55bba7f7043d66e158e355d6 105 Pfam PF03206 Nitrogen fixation protein NifW 7 102 2.2E-34 T 14-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 C3497_05700 de64419fb9c44ef8178fdd48ba974e60 159 Pfam PF06271 RDD family 18 145 8.5E-21 T 14-10-2018 IPR010432 RDD C3497_00665 4bf0b4b1453ec669b5f0dd1702fb2926 195 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 32 187 1.7E-48 T 14-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE C3497_00665 4bf0b4b1453ec669b5f0dd1702fb2926 195 Gene3D G3DSA:3.30.1460.40 24 156 1.1E-42 T 14-10-2018 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily C3497_00665 4bf0b4b1453ec669b5f0dd1702fb2926 195 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 36 186 2.8E-44 T 14-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE C3497_00665 4bf0b4b1453ec669b5f0dd1702fb2926 195 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 36 134 1.0E-18 T 14-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE C3497_14560 c4da4c495cd43e4cb653d9fed5513753 268 SUPERFAMILY SSF53474 18 265 4.63E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_14560 c4da4c495cd43e4cb653d9fed5513753 268 Pfam PF12697 Alpha/beta hydrolase family 26 257 1.4E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_14560 c4da4c495cd43e4cb653d9fed5513753 268 Gene3D G3DSA:3.40.50.1820 12 266 5.9E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_02150 42c1a3e7b25eca6da3e83ba7b1f2652e 229 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 225 32.419 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C3497_02150 42c1a3e7b25eca6da3e83ba7b1f2652e 229 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 226 2.0E-77 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C3497_02150 42c1a3e7b25eca6da3e83ba7b1f2652e 229 SUPERFAMILY SSF51419 1 224 2.36E-82 T 14-10-2018 IPR029066 PLP-binding barrel C3497_02150 42c1a3e7b25eca6da3e83ba7b1f2652e 229 PIRSF PIRSF004848 1 229 1.1E-74 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C3497_02150 42c1a3e7b25eca6da3e83ba7b1f2652e 229 Gene3D G3DSA:3.20.20.10 1 228 1.1E-90 T 14-10-2018 IPR029066 PLP-binding barrel C3497_02150 42c1a3e7b25eca6da3e83ba7b1f2652e 229 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C3497_02150 42c1a3e7b25eca6da3e83ba7b1f2652e 229 Pfam PF01168 Alanine racemase, N-terminal domain 7 226 5.2E-32 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_03875 9574c07983ee87dc034655fd2aa7c7f9 316 SMART SM00904 181 306 5.7E-60 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 C3497_03875 9574c07983ee87dc034655fd2aa7c7f9 316 SUPERFAMILY SSF52374 15 173 3.94E-36 T 14-10-2018 C3497_03875 9574c07983ee87dc034655fd2aa7c7f9 316 Pfam PF06574 FAD synthetase 12 164 4.9E-53 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 C3497_03875 9574c07983ee87dc034655fd2aa7c7f9 316 SUPERFAMILY SSF82114 172 309 3.92E-42 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 C3497_03875 9574c07983ee87dc034655fd2aa7c7f9 316 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 16 305 5.1E-96 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 C3497_03875 9574c07983ee87dc034655fd2aa7c7f9 316 Pfam PF01687 Riboflavin kinase 182 305 1.5E-36 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 C3497_03875 9574c07983ee87dc034655fd2aa7c7f9 316 PIRSF PIRSF004491 1 313 7.1E-104 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 C3497_03875 9574c07983ee87dc034655fd2aa7c7f9 316 Gene3D G3DSA:3.40.50.620 2 184 2.1E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_03875 9574c07983ee87dc034655fd2aa7c7f9 316 Gene3D G3DSA:2.40.30.30 186 313 2.1E-38 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 SMART SM00267 343 521 1.5E-64 T 14-10-2018 IPR000160 GGDEF domain C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 SMART SM00091 224 289 8.2E-5 T 14-10-2018 IPR000014 PAS domain C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 SMART SM00091 43 109 3.3E-5 T 14-10-2018 IPR000014 PAS domain C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 SUPERFAMILY SSF55073 359 523 4.16E-48 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 Gene3D G3DSA:3.30.450.20 209 350 1.8E-19 T 14-10-2018 C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 SUPERFAMILY SSF141868 537 780 2.48E-87 T 14-10-2018 IPR035919 EAL domain superfamily C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 520 4.8E-44 T 14-10-2018 IPR000160 GGDEF domain C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 Gene3D G3DSA:3.30.70.270 351 533 5.7E-59 T 14-10-2018 C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 SUPERFAMILY SSF55785 212 341 5.23E-16 T 14-10-2018 IPR035965 PAS domain superfamily C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 Gene3D G3DSA:3.20.20.450 534 785 9.6E-96 T 14-10-2018 IPR035919 EAL domain superfamily C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 Pfam PF00990 Diguanylate cyclase, GGDEF domain 354 516 4.4E-49 T 14-10-2018 IPR000160 GGDEF domain C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 Pfam PF00563 EAL domain 537 770 3.1E-71 T 14-10-2018 IPR001633 EAL domain C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 221 349 8.1E-12 T 14-10-2018 IPR000014 PAS domain C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 162 4.6E-15 T 14-10-2018 IPR000014 PAS domain C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 Gene3D G3DSA:3.30.450.20 31 153 1.5E-16 T 14-10-2018 C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 SMART SM00052 531 775 9.7E-115 T 14-10-2018 IPR001633 EAL domain C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 SUPERFAMILY SSF55785 39 153 3.77E-18 T 14-10-2018 IPR035965 PAS domain superfamily C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 Pfam PF08448 PAS fold 62 153 9.8E-9 T 14-10-2018 IPR013656 PAS fold-4 C3497_06335 df280c7d8211a86191fb2ed5fbaf8dca 786 Pfam PF08448 PAS fold 231 345 1.5E-15 T 14-10-2018 IPR013656 PAS fold-4 C3497_12470 9a0a1afd045e9fb88cb12a1d71ea5c07 635 Pfam PF00773 RNB domain 242 468 9.1E-36 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 C3497_12470 9a0a1afd045e9fb88cb12a1d71ea5c07 635 SMART SM00955 235 514 1.7E-69 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 C3497_12470 9a0a1afd045e9fb88cb12a1d71ea5c07 635 SUPERFAMILY SSF50249 206 559 2.34E-78 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_12470 9a0a1afd045e9fb88cb12a1d71ea5c07 635 Pfam PF00773 RNB domain 478 513 1.6E-7 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 C3497_04215 34c8a0e08c679b875cafdbab2950e7ff 138 Gene3D G3DSA:3.30.1450.10 37 117 5.1E-28 T 14-10-2018 IPR037873 BamE-like C3497_04215 34c8a0e08c679b875cafdbab2950e7ff 138 Pfam PF04355 SmpA / OmlA family 38 103 3.4E-25 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 C3497_04215 34c8a0e08c679b875cafdbab2950e7ff 138 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 116 27.916 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE C3497_09460 b51c4e04cc9995ad13315dd3685d7c24 247 Gene3D G3DSA:3.40.1210.10 1 247 2.9E-93 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C3497_09460 b51c4e04cc9995ad13315dd3685d7c24 247 Pfam PF01975 Survival protein SurE 3 182 6.8E-60 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C3497_09460 b51c4e04cc9995ad13315dd3685d7c24 247 SUPERFAMILY SSF64167 1 246 9.68E-86 T 14-10-2018 C3497_09460 b51c4e04cc9995ad13315dd3685d7c24 247 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 247 39.038 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C3497_09460 b51c4e04cc9995ad13315dd3685d7c24 247 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 5.1E-68 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C3497_00660 cdac131279d707ef5cd8f553f3a8c244 376 Gene3D G3DSA:1.10.645.10 204 365 2.7E-15 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_00660 cdac131279d707ef5cd8f553f3a8c244 376 Pfam PF00374 Nickel-dependent hydrogenase 286 332 1.1E-6 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C3497_00660 cdac131279d707ef5cd8f553f3a8c244 376 SUPERFAMILY SSF56762 32 369 1.44E-32 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_01495 ffc0d0a8db675a60ed389d2b739d0974 283 Pfam PF00510 Cytochrome c oxidase subunit III 8 282 9.2E-63 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01495 ffc0d0a8db675a60ed389d2b739d0974 283 Gene3D G3DSA:1.10.287.70 2 71 3.0E-20 T 14-10-2018 C3497_01495 ffc0d0a8db675a60ed389d2b739d0974 283 SUPERFAMILY SSF81452 4 283 2.75E-81 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01495 ffc0d0a8db675a60ed389d2b739d0974 283 Gene3D G3DSA:1.20.120.80 72 283 2.9E-66 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 SUPERFAMILY SSF48150 24 244 6.28E-74 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 SMART SM00478 59 210 6.5E-47 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 26 285 3.4E-106 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 Gene3D G3DSA:1.10.1670.10 29 231 3.9E-87 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 Pfam PF14815 NUDIX domain 255 361 2.3E-20 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 Gene3D G3DSA:1.10.340.30 41 152 3.9E-87 T 14-10-2018 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 56 188 1.1E-21 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 212 228 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 SUPERFAMILY SSF55811 240 363 3.79E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 Gene3D G3DSA:3.90.79.10 245 364 2.7E-12 T 14-10-2018 C3497_00550 58c3c82f6a8ed0e96464578cacb89392 364 Pfam PF00633 Helix-hairpin-helix motif 120 148 1.6E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 C3497_06345 bf59beba9ca2d4e343fc8e8d1c871a54 247 Gene3D G3DSA:3.40.50.1010 1 143 1.9E-13 T 14-10-2018 C3497_06345 bf59beba9ca2d4e343fc8e8d1c871a54 247 Pfam PF01936 NYN domain 6 140 5.2E-34 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type C3497_06345 bf59beba9ca2d4e343fc8e8d1c871a54 247 Pfam PF12872 OST-HTH/LOTUS domain 169 232 3.1E-15 T 14-10-2018 IPR025605 OST-HTH/LOTUS domain C3497_06345 bf59beba9ca2d4e343fc8e8d1c871a54 247 Gene3D G3DSA:1.10.10.1880 174 239 2.1E-23 T 14-10-2018 C3497_11510 5d777969338caa8fe00fdd102af8f4aa 187 TIGRFAM TIGR01841 phasin: phasin family protein 26 108 1.8E-23 T 14-10-2018 IPR010127 Phasin, subfamily 1 C3497_11510 5d777969338caa8fe00fdd102af8f4aa 187 Pfam PF09361 Phasin protein 6 105 1.5E-32 T 14-10-2018 IPR018968 Phasin C3497_11720 a0343d871e0946a0ac073518ebfdc292 226 Gene3D G3DSA:1.10.10.10 123 225 3.5E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_11720 a0343d871e0946a0ac073518ebfdc292 226 SMART SM00862 145 220 2.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_11720 a0343d871e0946a0ac073518ebfdc292 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 5.9E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_11720 a0343d871e0946a0ac073518ebfdc292 226 Gene3D G3DSA:3.40.50.2300 1 121 1.9E-39 T 14-10-2018 C3497_11720 a0343d871e0946a0ac073518ebfdc292 226 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 1.7E-110 T 14-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 C3497_11720 a0343d871e0946a0ac073518ebfdc292 226 SMART SM00448 1 112 7.9E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_11720 a0343d871e0946a0ac073518ebfdc292 226 SUPERFAMILY SSF52172 1 175 1.66E-41 T 14-10-2018 IPR011006 CheY-like superfamily C3497_11720 a0343d871e0946a0ac073518ebfdc292 226 Pfam PF00072 Response regulator receiver domain 3 113 7.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01165 6ba087fe0c6fc041437d69fa32b0c7b4 462 Gene3D G3DSA:1.10.287.130 201 307 1.2E-5 T 14-10-2018 C3497_01165 6ba087fe0c6fc041437d69fa32b0c7b4 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 8.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01165 6ba087fe0c6fc041437d69fa32b0c7b4 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 8.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01165 6ba087fe0c6fc041437d69fa32b0c7b4 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 8.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01165 6ba087fe0c6fc041437d69fa32b0c7b4 462 SUPERFAMILY SSF55874 321 460 7.73E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_01165 6ba087fe0c6fc041437d69fa32b0c7b4 462 SMART SM00387 357 462 3.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_01165 6ba087fe0c6fc041437d69fa32b0c7b4 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 461 2.6E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_01165 6ba087fe0c6fc041437d69fa32b0c7b4 462 Gene3D G3DSA:3.30.565.10 318 462 4.0E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_14175 8e18316d892965da9bbe7b6752243047 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 C3497_14175 8e18316d892965da9bbe7b6752243047 112 SUPERFAMILY SSF54913 1 112 5.4E-44 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C3497_14175 8e18316d892965da9bbe7b6752243047 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 C3497_14175 8e18316d892965da9bbe7b6752243047 112 SMART SM00938 4 105 2.3E-64 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_14175 8e18316d892965da9bbe7b6752243047 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.3E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_14175 8e18316d892965da9bbe7b6752243047 112 Gene3D G3DSA:3.30.70.120 1 112 5.6E-45 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C3497_14175 8e18316d892965da9bbe7b6752243047 112 PIRSF PIRSF039144 1 112 2.3E-53 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_14175 8e18316d892965da9bbe7b6752243047 112 PRINTS PR00340 P-II protein signature 23 41 1.2E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_14175 8e18316d892965da9bbe7b6752243047 112 PRINTS PR00340 P-II protein signature 83 103 1.2E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_14175 8e18316d892965da9bbe7b6752243047 112 PRINTS PR00340 P-II protein signature 2 17 1.2E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_14175 8e18316d892965da9bbe7b6752243047 112 PRINTS PR00340 P-II protein signature 52 75 1.2E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 PIRSF PIRSF000197 14 1226 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 Gene3D G3DSA:3.20.20.220 152 535 3.7E-148 T 14-10-2018 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 Gene3D G3DSA:3.20.20.220 26 122 2.7E-11 T 14-10-2018 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 82 193 1.4E-45 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 SUPERFAMILY SSF53720 583 1026 1.28E-124 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 Gene3D G3DSA:3.40.605.10 581 1026 6.9E-143 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 Gene3D G3DSA:3.40.309.10 806 998 6.9E-143 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 535 1027 1.2E-224 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 831 842 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 Pfam PF00171 Aldehyde dehydrogenase family 586 1025 1.1E-116 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 SUPERFAMILY SSF51730 196 542 3.3E-122 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 SUPERFAMILY SSF81935 26 195 2.22E-62 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 C3497_02705 6ea95ef63b391cbd39263239b7efd96e 1227 Pfam PF01619 Proline dehydrogenase 205 500 5.8E-100 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 C3497_07575 bb04c50e4fa2f9db243961b503737a91 312 Gene3D G3DSA:3.30.1300.30 56 299 2.0E-43 T 14-10-2018 C3497_07575 bb04c50e4fa2f9db243961b503737a91 312 SUPERFAMILY SSF54523 53 303 5.02E-14 T 14-10-2018 C3497_07575 bb04c50e4fa2f9db243961b503737a91 312 Gene3D G3DSA:1.10.40.60 112 213 2.0E-43 T 14-10-2018 IPR038072 GspK, central domain superfamily C3497_07575 bb04c50e4fa2f9db243961b503737a91 312 SUPERFAMILY SSF47781 208 258 3.93E-5 T 14-10-2018 IPR010994 RuvA domain 2-like C3497_07575 bb04c50e4fa2f9db243961b503737a91 312 Pfam PF03934 Type II secretion system (T2SS), protein K 47 306 1.9E-70 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 C3497_07575 bb04c50e4fa2f9db243961b503737a91 312 Gene3D G3DSA:1.10.40.60 214 274 2.0E-43 T 14-10-2018 IPR038072 GspK, central domain superfamily C3497_07575 bb04c50e4fa2f9db243961b503737a91 312 PIRSF PIRSF002786 13 312 8.3E-67 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 C3497_07575 bb04c50e4fa2f9db243961b503737a91 312 SUPERFAMILY SSF158544 114 209 1.6E-12 T 14-10-2018 IPR038072 GspK, central domain superfamily C3497_00105 99cd7964817e1fafd0458adb8224c820 260 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 55 228 1.2E-41 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 C3497_00105 99cd7964817e1fafd0458adb8224c820 260 SUPERFAMILY SSF52402 33 215 3.84E-47 T 14-10-2018 C3497_00105 99cd7964817e1fafd0458adb8224c820 260 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 59 252 1.3E-76 T 14-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 C3497_00105 99cd7964817e1fafd0458adb8224c820 260 Gene3D G3DSA:3.40.50.620 21 259 1.6E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_00105 99cd7964817e1fafd0458adb8224c820 260 PIRSF PIRSF000857 12 258 3.9E-81 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 C3497_00105 99cd7964817e1fafd0458adb8224c820 260 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 39 253 5.3E-50 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 C3497_09030 b23f6175dc9c49a44e1293dcf70cf299 270 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 205 1.3E-10 T 14-10-2018 C3497_09030 b23f6175dc9c49a44e1293dcf70cf299 270 Gene3D G3DSA:1.10.150.240 23 101 3.1E-98 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C3497_09030 b23f6175dc9c49a44e1293dcf70cf299 270 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 70 205 1.8E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3497_09030 b23f6175dc9c49a44e1293dcf70cf299 270 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 270 123.834 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 C3497_09030 b23f6175dc9c49a44e1293dcf70cf299 270 Gene3D G3DSA:3.40.50.1000 7 270 3.1E-98 T 14-10-2018 IPR023214 HAD superfamily C3497_09030 b23f6175dc9c49a44e1293dcf70cf299 270 SUPERFAMILY SSF56784 5 258 1.6E-55 T 14-10-2018 IPR036412 HAD-like superfamily C3497_09030 b23f6175dc9c49a44e1293dcf70cf299 270 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 4 255 5.2E-105 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 C3497_13425 be3fa548efda730dc86236ef4604501a 208 SUPERFAMILY SSF56935 29 203 2.06E-38 T 14-10-2018 C3497_13425 be3fa548efda730dc86236ef4604501a 208 Gene3D G3DSA:2.170.130.10 28 149 2.8E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_13425 be3fa548efda730dc86236ef4604501a 208 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 145 9.4E-26 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_05825 29a1ab9a41dfc245dde978409bb5c79e 205 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 27 183 2.7E-27 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain C3497_05825 29a1ab9a41dfc245dde978409bb5c79e 205 Gene3D G3DSA:3.40.50.1110 21 204 4.4E-69 T 14-10-2018 IPR036514 SGNH hydrolase superfamily C3497_05825 29a1ab9a41dfc245dde978409bb5c79e 205 SUPERFAMILY SSF52266 22 200 7.02E-49 T 14-10-2018 C3497_01985 f0b2352b114dcb381d35823456cef3a7 209 SMART SM01390 3 98 1.9E-52 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 C3497_01985 f0b2352b114dcb381d35823456cef3a7 209 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 98 1.2E-31 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 C3497_01985 f0b2352b114dcb381d35823456cef3a7 209 Gene3D G3DSA:1.10.1050.10 6 209 3.2E-84 T 14-10-2018 C3497_01985 f0b2352b114dcb381d35823456cef3a7 209 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 4 209 2.3E-71 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3497_01985 f0b2352b114dcb381d35823456cef3a7 209 Pfam PF01479 S4 domain 100 146 9.0E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01985 f0b2352b114dcb381d35823456cef3a7 209 SUPERFAMILY SSF55174 2 209 1.02E-67 T 14-10-2018 C3497_01985 f0b2352b114dcb381d35823456cef3a7 209 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 209 34.766 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3497_01985 f0b2352b114dcb381d35823456cef3a7 209 SMART SM00363 99 163 3.9E-17 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01985 f0b2352b114dcb381d35823456cef3a7 209 Gene3D G3DSA:3.10.290.10 98 194 3.2E-84 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3497_10820 12ed152e9239d828db5f870cd00f0afb 187 SUPERFAMILY SSF52540 4 183 9.41E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10820 12ed152e9239d828db5f870cd00f0afb 187 Gene3D G3DSA:3.30.63.10 37 92 2.4E-19 T 14-10-2018 C3497_10820 12ed152e9239d828db5f870cd00f0afb 187 Pfam PF00625 Guanylate kinase 3 179 4.1E-5 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit C3497_10820 12ed152e9239d828db5f870cd00f0afb 187 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 2 180 34.58 T 14-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_10820 12ed152e9239d828db5f870cd00f0afb 187 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 4 180 9.8E-74 T 14-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_10820 12ed152e9239d828db5f870cd00f0afb 187 Gene3D G3DSA:3.40.50.300 8 177 2.4E-19 T 14-10-2018 C3497_10820 12ed152e9239d828db5f870cd00f0afb 187 SMART SM00072 2 183 9.1E-6 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit C3497_12595 24829ede2f97d4492983efdfb91497ad 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.4E-23 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12595 24829ede2f97d4492983efdfb91497ad 150 Gene3D G3DSA:3.40.5.10 1 50 4.4E-24 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12595 24829ede2f97d4492983efdfb91497ad 150 SUPERFAMILY SSF55658 1 55 3.49E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal C3497_12595 24829ede2f97d4492983efdfb91497ad 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 26.659 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_12595 24829ede2f97d4492983efdfb91497ad 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 5.9E-45 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_12595 24829ede2f97d4492983efdfb91497ad 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 4.8E-26 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal C3497_12595 24829ede2f97d4492983efdfb91497ad 150 Gene3D G3DSA:3.10.430.100 61 148 5.8E-27 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily C3497_12595 24829ede2f97d4492983efdfb91497ad 150 SUPERFAMILY SSF55653 59 147 3.14E-26 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily C3497_12595 24829ede2f97d4492983efdfb91497ad 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_04030 65b9deb3dc4a9392c4aad70f0660ebd3 104 SUPERFAMILY SSF55021 16 89 3.56E-16 T 14-10-2018 C3497_04030 65b9deb3dc4a9392c4aad70f0660ebd3 104 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 23 86 5.0E-16 T 14-10-2018 C3497_04030 65b9deb3dc4a9392c4aad70f0660ebd3 104 Gene3D G3DSA:3.30.70.260 8 104 2.6E-33 T 14-10-2018 C3497_04030 65b9deb3dc4a9392c4aad70f0660ebd3 104 Pfam PF13710 ACT domain 26 86 4.6E-10 T 14-10-2018 C3497_04125 b00a6f81ad355733bd63639152ed9b0a 389 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 8 388 55.367 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 C3497_04125 b00a6f81ad355733bd63639152ed9b0a 389 PIRSF PIRSF001434 1 389 1.9E-134 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_04125 b00a6f81ad355733bd63639152ed9b0a 389 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_04125 b00a6f81ad355733bd63639152ed9b0a 389 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 7 387 2.1E-178 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 C3497_04125 b00a6f81ad355733bd63639152ed9b0a 389 Gene3D G3DSA:3.40.640.10 2 253 1.3E-88 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_04125 b00a6f81ad355733bd63639152ed9b0a 389 Gene3D G3DSA:3.90.1150.10 257 389 1.3E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_04125 b00a6f81ad355733bd63639152ed9b0a 389 SUPERFAMILY SSF53383 26 388 4.03E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_04125 b00a6f81ad355733bd63639152ed9b0a 389 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 387 8.2E-140 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_11325 8bea30c07941d4bc38758213507eaac2 256 SMART SM00332 1 244 4.3E-25 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_11325 8bea30c07941d4bc38758213507eaac2 256 Pfam PF13672 Protein phosphatase 2C 22 213 1.7E-18 T 14-10-2018 C3497_11325 8bea30c07941d4bc38758213507eaac2 256 SUPERFAMILY SSF81606 8 246 1.44E-62 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_11325 8bea30c07941d4bc38758213507eaac2 256 SMART SM00331 14 246 1.2E-33 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_11325 8bea30c07941d4bc38758213507eaac2 256 Gene3D G3DSA:3.60.40.10 1 250 9.9E-68 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_04930 c1db294f27f54282006b4c2769b5dd8f 157 Pfam PF00578 AhpC/TSA family 12 135 1.3E-30 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3497_04930 c1db294f27f54282006b4c2769b5dd8f 157 PIRSF PIRSF000239 8 157 8.5E-22 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3497_04930 c1db294f27f54282006b4c2769b5dd8f 157 Gene3D G3DSA:3.40.30.10 6 156 6.2E-42 T 14-10-2018 C3497_04930 c1db294f27f54282006b4c2769b5dd8f 157 SUPERFAMILY SSF52833 10 157 1.62E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_01285 7cabc75ec84b19dc0ea218bdcb42db8b 281 SUPERFAMILY SSF51730 6 276 2.35E-96 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like C3497_01285 7cabc75ec84b19dc0ea218bdcb42db8b 281 Gene3D G3DSA:3.20.20.220 1 281 4.5E-97 T 14-10-2018 C3497_01285 7cabc75ec84b19dc0ea218bdcb42db8b 281 Pfam PF02219 Methylenetetrahydrofolate reductase 4 275 1.2E-87 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 C3497_01285 7cabc75ec84b19dc0ea218bdcb42db8b 281 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 274 2.7E-98 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 C3497_09655 096bfb7663de647a33d47a410963611e 308 SUPERFAMILY SSF53448 9 286 2.94E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_09655 096bfb7663de647a33d47a410963611e 308 Pfam PF00535 Glycosyl transferase family 2 10 196 3.1E-20 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3497_09655 096bfb7663de647a33d47a410963611e 308 Gene3D G3DSA:3.90.550.10 1 242 4.7E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_06215 9ebb076758f8416536993741e25a4ffc 259 SUPERFAMILY SSF48371 21 221 1.01E-39 T 14-10-2018 IPR016024 Armadillo-type fold C3497_06215 9ebb076758f8416536993741e25a4ffc 259 Pfam PF01816 Leucine rich repeat variant 94 116 3.0E-6 T 14-10-2018 IPR004830 Leucine rich repeat variant C3497_06215 9ebb076758f8416536993741e25a4ffc 259 Pfam PF01816 Leucine rich repeat variant 117 140 7.5E-8 T 14-10-2018 IPR004830 Leucine rich repeat variant C3497_06215 9ebb076758f8416536993741e25a4ffc 259 Pfam PF01816 Leucine rich repeat variant 141 164 3.4E-6 T 14-10-2018 IPR004830 Leucine rich repeat variant C3497_06215 9ebb076758f8416536993741e25a4ffc 259 Pfam PF01816 Leucine rich repeat variant 167 188 6.8E-6 T 14-10-2018 IPR004830 Leucine rich repeat variant C3497_06215 9ebb076758f8416536993741e25a4ffc 259 Gene3D G3DSA:1.25.10.10 6 250 2.8E-80 T 14-10-2018 IPR011989 Armadillo-like helical C3497_06215 9ebb076758f8416536993741e25a4ffc 259 Pfam PF05484 LRV protein FeS4 cluster 18 61 6.0E-9 T 14-10-2018 IPR008665 LRV FeS4 cluster C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 TIGRFAM TIGR01817 nifA: Nif-specific regulatory protein 19 452 1.2E-186 T 14-10-2018 IPR010113 Nif-specific regulatory protein GO:0003700|GO:0006355|GO:0009399 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 418 427 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 SUPERFAMILY SSF55781 19 172 2.84E-21 T 14-10-2018 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 SUPERFAMILY SSF46689 418 511 2.33E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 Gene3D G3DSA:3.30.450.40 18 185 7.5E-36 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 Pfam PF00158 Sigma-54 interaction domain 207 372 6.1E-74 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 Pfam PF02954 Bacterial regulatory protein, Fis family 473 507 5.7E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 Gene3D G3DSA:3.40.50.300 193 377 2.8E-68 T 14-10-2018 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 SMART SM00382 226 369 2.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 Gene3D G3DSA:1.10.8.60 378 454 4.2E-23 T 14-10-2018 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 Gene3D G3DSA:1.10.10.60 469 515 8.2E-10 T 14-10-2018 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 SMART SM00065 36 183 1.5E-19 T 14-10-2018 IPR003018 GAF domain GO:0005515 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 475 492 5.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 492 512 5.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 SUPERFAMILY SSF52540 205 446 1.44E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06260 ea90ee5e6385f68ae779904d8e95acc2 516 Pfam PF13185 GAF domain 35 173 2.8E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 C3497_00100 701ae0d2a8f1269b844623c066c54918 311 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 32 265 2.4E-44 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 C3497_00100 701ae0d2a8f1269b844623c066c54918 311 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 12 311 6.6E-125 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C3497_00100 701ae0d2a8f1269b844623c066c54918 311 SUPERFAMILY SSF52402 9 212 5.59E-62 T 14-10-2018 C3497_00100 701ae0d2a8f1269b844623c066c54918 311 Gene3D G3DSA:3.40.50.620 10 214 1.7E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_00100 701ae0d2a8f1269b844623c066c54918 311 PIRSF PIRSF002936 3 311 3.1E-136 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C3497_13160 5d7afd7b39e078c91e4b07997fbc77e2 315 SUPERFAMILY SSF56112 15 286 3.64E-55 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3497_13160 5d7afd7b39e078c91e4b07997fbc77e2 315 Gene3D G3DSA:3.30.200.20 2 117 1.4E-14 T 14-10-2018 C3497_13160 5d7afd7b39e078c91e4b07997fbc77e2 315 Pfam PF00069 Protein kinase domain 19 279 1.5E-35 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C3497_13160 5d7afd7b39e078c91e4b07997fbc77e2 315 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 155 167 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 C3497_13160 5d7afd7b39e078c91e4b07997fbc77e2 315 SMART SM00220 18 288 2.6E-33 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C3497_13160 5d7afd7b39e078c91e4b07997fbc77e2 315 Gene3D G3DSA:1.10.510.10 118 300 5.2E-33 T 14-10-2018 C3497_08150 a61c653813b05fd1e28d8985f86d5d92 161 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 138 24.196 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 C3497_08150 a61c653813b05fd1e28d8985f86d5d92 161 SUPERFAMILY SSF69287 1 70 7.59E-16 T 14-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily C3497_08150 a61c653813b05fd1e28d8985f86d5d92 161 SUPERFAMILY SSF69737 70 137 2.09E-22 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 C3497_08150 a61c653813b05fd1e28d8985f86d5d92 161 PIRSF PIRSF036402 3 155 2.9E-45 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 C3497_08150 a61c653813b05fd1e28d8985f86d5d92 161 SMART SM00988 1 64 1.9E-16 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal C3497_08150 a61c653813b05fd1e28d8985f86d5d92 161 Gene3D G3DSA:3.30.70.790 71 141 2.1E-30 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 C3497_08150 a61c653813b05fd1e28d8985f86d5d92 161 Gene3D G3DSA:2.60.260.20 1 69 2.2E-21 T 14-10-2018 C3497_08150 a61c653813b05fd1e28d8985f86d5d92 161 Pfam PF05194 UreE urease accessory protein, C-terminal domain 71 144 1.9E-28 T 14-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 C3497_08150 a61c653813b05fd1e28d8985f86d5d92 161 Pfam PF02814 UreE urease accessory protein, N-terminal domain 12 64 4.1E-14 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal C3497_05730 f2c5f5696a0027904632799cd72b2c27 212 PIRSF PIRSF000705 1 207 5.9E-56 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 C3497_05730 f2c5f5696a0027904632799cd72b2c27 212 SUPERFAMILY SSF52540 1 207 1.23E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05730 f2c5f5696a0027904632799cd72b2c27 212 Pfam PF01712 Deoxynucleoside kinase 8 199 1.0E-34 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain C3497_05730 f2c5f5696a0027904632799cd72b2c27 212 Gene3D G3DSA:3.40.50.300 7 202 3.5E-43 T 14-10-2018 C3497_11575 64cd13b8ee8d9c5eb9f550ecb1d2ca7d 270 SMART SM00382 96 233 5.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_11575 64cd13b8ee8d9c5eb9f550ecb1d2ca7d 270 Pfam PF01695 IstB-like ATP binding protein 53 229 1.2E-59 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C3497_11575 64cd13b8ee8d9c5eb9f550ecb1d2ca7d 270 SUPERFAMILY SSF52540 92 230 4.92E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11575 64cd13b8ee8d9c5eb9f550ecb1d2ca7d 270 PIRSF PIRSF003073 1 249 2.1E-76 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein C3497_11575 64cd13b8ee8d9c5eb9f550ecb1d2ca7d 270 Gene3D G3DSA:3.40.50.300 60 244 6.7E-41 T 14-10-2018 C3497_09860 64cd13b8ee8d9c5eb9f550ecb1d2ca7d 270 SMART SM00382 96 233 5.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_09860 64cd13b8ee8d9c5eb9f550ecb1d2ca7d 270 Pfam PF01695 IstB-like ATP binding protein 53 229 1.2E-59 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C3497_09860 64cd13b8ee8d9c5eb9f550ecb1d2ca7d 270 SUPERFAMILY SSF52540 92 230 4.92E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09860 64cd13b8ee8d9c5eb9f550ecb1d2ca7d 270 PIRSF PIRSF003073 1 249 2.1E-76 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein C3497_09860 64cd13b8ee8d9c5eb9f550ecb1d2ca7d 270 Gene3D G3DSA:3.40.50.300 60 244 6.7E-41 T 14-10-2018 C3497_05545 d447f0a2089ddf1a14dc781cd61b14ac 243 Gene3D G3DSA:2.40.50.140 7 81 3.0E-30 T 14-10-2018 C3497_05545 d447f0a2089ddf1a14dc781cd61b14ac 243 Pfam PF11967 Recombination protein O N terminal 9 79 8.7E-21 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal C3497_05545 d447f0a2089ddf1a14dc781cd61b14ac 243 SUPERFAMILY SSF57863 91 161 1.05E-8 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger C3497_05545 d447f0a2089ddf1a14dc781cd61b14ac 243 Pfam PF02565 Recombination protein O C terminal 87 235 1.6E-21 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 C3497_05545 d447f0a2089ddf1a14dc781cd61b14ac 243 SUPERFAMILY SSF50249 7 80 4.11E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_05545 d447f0a2089ddf1a14dc781cd61b14ac 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 10 240 1.5E-24 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 C3497_05545 d447f0a2089ddf1a14dc781cd61b14ac 243 Gene3D G3DSA:1.20.1440.120 85 243 2.1E-47 T 14-10-2018 C3497_05545 d447f0a2089ddf1a14dc781cd61b14ac 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 240 22.645 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 C3497_04105 9b80c45bb2a268162fec9d2230f1392d 435 Gene3D G3DSA:3.40.1190.10 2 297 1.1E-88 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_04105 9b80c45bb2a268162fec9d2230f1392d 435 SUPERFAMILY SSF53623 9 294 3.66E-88 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_04105 9b80c45bb2a268162fec9d2230f1392d 435 TIGRFAM TIGR01499 folC: bifunctional protein FolC 29 428 1.2E-96 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 C3497_04105 9b80c45bb2a268162fec9d2230f1392d 435 SUPERFAMILY SSF53244 296 429 6.04E-28 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_04105 9b80c45bb2a268162fec9d2230f1392d 435 Gene3D G3DSA:3.90.190.20 298 435 5.4E-29 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_04105 9b80c45bb2a268162fec9d2230f1392d 435 Pfam PF08245 Mur ligase middle domain 50 190 6.5E-11 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3497_04105 9b80c45bb2a268162fec9d2230f1392d 435 PIRSF PIRSF001563 3 435 9.1E-105 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 C3497_04105 9b80c45bb2a268162fec9d2230f1392d 435 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 48 71 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 C3497_04320 13b13bef1d4e3809c78ea2d4afc3bcfd 181 Gene3D G3DSA:1.10.1740.10 5 70 7.3E-15 T 14-10-2018 C3497_04320 13b13bef1d4e3809c78ea2d4afc3bcfd 181 Gene3D G3DSA:1.10.10.10 71 157 2.2E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_04320 13b13bef1d4e3809c78ea2d4afc3bcfd 181 SUPERFAMILY SSF88946 8 90 9.81E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C3497_04320 13b13bef1d4e3809c78ea2d4afc3bcfd 181 Pfam PF08281 Sigma-70, region 4 99 150 5.5E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_04320 13b13bef1d4e3809c78ea2d4afc3bcfd 181 SUPERFAMILY SSF88659 95 154 5.42E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3497_04320 13b13bef1d4e3809c78ea2d4afc3bcfd 181 Pfam PF04542 Sigma-70 region 2 10 73 1.1E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C3497_04320 13b13bef1d4e3809c78ea2d4afc3bcfd 181 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 8 175 1.5E-52 T 14-10-2018 IPR014304 RNA polymerase sigma-Z type C3497_04320 13b13bef1d4e3809c78ea2d4afc3bcfd 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 154 2.4E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C3497_13145 8e51220f640c2faa9555db54026218bf 71 SMART SM01409 8 63 7.9E-17 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C3497_13145 8e51220f640c2faa9555db54026218bf 71 Gene3D G3DSA:3.90.940.10 1 71 9.0E-24 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C3497_13145 8e51220f640c2faa9555db54026218bf 71 SUPERFAMILY SSF63562 1 68 1.7E-22 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C3497_13145 8e51220f640c2faa9555db54026218bf 71 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 61 4.4E-23 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_13145 8e51220f640c2faa9555db54026218bf 71 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 64 17.51 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_13145 8e51220f640c2faa9555db54026218bf 71 Pfam PF01192 RNA polymerase Rpb6 8 61 3.8E-17 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 40 413 2.8E-133 T 14-10-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 Gene3D G3DSA:2.160.20.10 25 139 6.6E-15 T 14-10-2018 IPR012334 Pectin lyase fold C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 258 299 1.1E-6 T 14-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00710 286 307 61.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00710 175 196 5000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00710 264 285 450.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00710 241 263 1200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00710 197 218 1600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00710 309 346 1700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00710 123 144 400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00710 145 174 83.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00710 93 121 190.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 Pfam PF05048 Periplasmic copper-binding protein (NosD) 152 376 9.2E-62 T 14-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 Gene3D G3DSA:2.160.20.10 187 346 7.9E-22 T 14-10-2018 IPR012334 Pectin lyase fold C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00722 201 360 0.75 T 14-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SMART SM00722 55 195 1.1E-7 T 14-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain C3497_05360 7afd21bdb2d379f3f0e3d4e6ef059a61 431 SUPERFAMILY SSF51126 33 399 2.6E-65 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor C3497_00065 cbeca6baf514e260f6a8f10ec527fac2 444 SUPERFAMILY SSF52540 3 439 8.22E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00065 cbeca6baf514e260f6a8f10ec527fac2 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 98 2.8E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_00065 cbeca6baf514e260f6a8f10ec527fac2 444 Pfam PF07724 AAA domain (Cdc48 subfamily) 192 330 2.0E-39 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_00065 cbeca6baf514e260f6a8f10ec527fac2 444 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 336 407 5.4E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3497_00065 cbeca6baf514e260f6a8f10ec527fac2 444 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 444 4.1E-199 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 C3497_00065 cbeca6baf514e260f6a8f10ec527fac2 444 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 444 42.257 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 C3497_00065 cbeca6baf514e260f6a8f10ec527fac2 444 SMART SM00382 49 333 4.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00065 cbeca6baf514e260f6a8f10ec527fac2 444 SMART SM01086 336 432 8.0E-17 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3497_00065 cbeca6baf514e260f6a8f10ec527fac2 444 Gene3D G3DSA:1.10.8.60 336 441 1.2E-35 T 14-10-2018 C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 Pfam PF00989 PAS fold 23 129 1.7E-14 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 SUPERFAMILY SSF55785 30 131 3.84E-26 T 14-10-2018 IPR035965 PAS domain superfamily C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 512 1.2E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 142 1.1E-21 T 14-10-2018 IPR000014 PAS domain C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 Gene3D G3DSA:3.30.450.20 15 143 8.3E-31 T 14-10-2018 C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 SUPERFAMILY SSF55785 133 240 2.18E-5 T 14-10-2018 IPR035965 PAS domain superfamily C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 Gene3D G3DSA:3.30.450.20 144 279 1.5E-10 T 14-10-2018 C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 SUPERFAMILY SSF55874 362 512 2.36E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 TIGRFAM TIGR02938 nifL_nitrog: nitrogen fixation negative regulator NifL 21 511 2.0E-177 T 14-10-2018 IPR014285 Nitrogen fixation negative regulator NifL GO:0007165|GO:0009399 C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 SMART SM00387 401 514 2.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 1.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 1.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 492 1.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 SMART SM00086 93 135 0.0029 T 14-10-2018 IPR001610 PAC motif C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 Gene3D G3DSA:3.30.565.10 361 518 2.2E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 SMART SM00091 147 213 300.0 T 14-10-2018 IPR000014 PAS domain C3497_06255 49847edb8ffe37f25410b7cdbf9e916a 524 SMART SM00091 21 87 9.2E-5 T 14-10-2018 IPR000014 PAS domain C3497_12290 fe6467a78bff1ddf6d727dfa02007513 316 SUPERFAMILY SSF53613 1 297 1.29E-66 T 14-10-2018 IPR029056 Ribokinase-like C3497_12290 fe6467a78bff1ddf6d727dfa02007513 316 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 C3497_12290 fe6467a78bff1ddf6d727dfa02007513 316 Pfam PF00294 pfkB family carbohydrate kinase 35 293 9.0E-38 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB C3497_12290 fe6467a78bff1ddf6d727dfa02007513 316 Gene3D G3DSA:3.40.1190.20 1 315 2.9E-113 T 14-10-2018 IPR029056 Ribokinase-like C3497_11895 042b864221a3b9138ef8c458b7e37cd2 446 SUPERFAMILY SSF55920 184 443 4.06E-88 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like C3497_11895 042b864221a3b9138ef8c458b7e37cd2 446 Pfam PF00557 Metallopeptidase family M24 189 420 1.5E-66 T 14-10-2018 IPR000994 Peptidase M24 C3497_11895 042b864221a3b9138ef8c458b7e37cd2 446 Gene3D G3DSA:3.90.230.10 180 445 2.7E-102 T 14-10-2018 C3497_11895 042b864221a3b9138ef8c458b7e37cd2 446 Gene3D G3DSA:3.40.350.10 11 179 4.5E-46 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal C3497_11895 042b864221a3b9138ef8c458b7e37cd2 446 Pfam PF05195 Aminopeptidase P, N-terminal domain 14 130 4.4E-32 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 C3497_11895 042b864221a3b9138ef8c458b7e37cd2 446 SUPERFAMILY SSF53092 9 182 1.12E-48 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal C3497_11895 042b864221a3b9138ef8c458b7e37cd2 446 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 356 368 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site C3497_11895 042b864221a3b9138ef8c458b7e37cd2 446 SMART SM01011 9 144 2.8E-57 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 C3497_07570 dccabfdd58e01160e42404c62ef317c7 412 SUPERFAMILY SSF53067 15 148 6.09E-16 T 14-10-2018 C3497_07570 dccabfdd58e01160e42404c62ef317c7 412 Pfam PF05134 Type II secretion system (T2SS), protein L 41 194 2.3E-10 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain C3497_07570 dccabfdd58e01160e42404c62ef317c7 412 Pfam PF12693 GspL periplasmic domain 266 382 1.4E-10 T 14-10-2018 IPR025691 GspL periplasmic domain C3497_07570 dccabfdd58e01160e42404c62ef317c7 412 Gene3D G3DSA:3.30.420.380 12 165 5.0E-14 T 14-10-2018 C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 SMART SM00267 399 586 8.6E-7 T 14-10-2018 IPR000160 GGDEF domain C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 SUPERFAMILY SSF141868 10 246 6.8E-60 T 14-10-2018 IPR035919 EAL domain superfamily C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 SUPERFAMILY SSF55073 416 582 3.53E-21 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 510 2.9E-11 T 14-10-2018 IPR000160 GGDEF domain C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 Gene3D G3DSA:3.10.580.10 283 404 7.8E-7 T 14-10-2018 C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 Gene3D G3DSA:3.20.20.450 2 256 1.4E-61 T 14-10-2018 IPR035919 EAL domain superfamily C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 424 502 6.3E-12 T 14-10-2018 IPR000160 GGDEF domain C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 SUPERFAMILY SSF54631 285 405 7.52E-7 T 14-10-2018 C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 Pfam PF00563 EAL domain 10 241 9.4E-50 T 14-10-2018 IPR001633 EAL domain C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 SMART SM00052 3 246 2.0E-36 T 14-10-2018 IPR001633 EAL domain C3497_04980 8fe639ff76a6c4a6f8015a4030c96c3b 598 Gene3D G3DSA:3.30.70.270 405 582 8.6E-25 T 14-10-2018 C3497_09725 46b465c9455d5caf95d4b2811ffd569d 65 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 59 2.0E-11 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA C3497_07380 e02c2243b53cde6327d3159ec2bbdf27 274 Pfam PF00557 Metallopeptidase family M24 12 247 2.0E-56 T 14-10-2018 IPR000994 Peptidase M24 C3497_07380 e02c2243b53cde6327d3159ec2bbdf27 274 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3497_07380 e02c2243b53cde6327d3159ec2bbdf27 274 Gene3D G3DSA:3.90.230.10 1 259 2.0E-110 T 14-10-2018 C3497_07380 e02c2243b53cde6327d3159ec2bbdf27 274 Hamap MF_01974 Methionine aminopeptidase [map]. 3 256 41.991 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3497_07380 e02c2243b53cde6327d3159ec2bbdf27 274 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 255 1.7E-95 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3497_07380 e02c2243b53cde6327d3159ec2bbdf27 274 SUPERFAMILY SSF55920 3 257 5.23E-92 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like C3497_07380 e02c2243b53cde6327d3159ec2bbdf27 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 2.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3497_07380 e02c2243b53cde6327d3159ec2bbdf27 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 2.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3497_07380 e02c2243b53cde6327d3159ec2bbdf27 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 2.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3497_07380 e02c2243b53cde6327d3159ec2bbdf27 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 2.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3497_13285 909b2f1775346f8d6a7429a7f512111c 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13285 909b2f1775346f8d6a7429a7f512111c 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 1.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13285 909b2f1775346f8d6a7429a7f512111c 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 1.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13285 909b2f1775346f8d6a7429a7f512111c 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 1.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13285 909b2f1775346f8d6a7429a7f512111c 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 1.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13285 909b2f1775346f8d6a7429a7f512111c 178 SUPERFAMILY SSF47928 3 107 1.44E-24 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13285 909b2f1775346f8d6a7429a7f512111c 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.36 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13285 909b2f1775346f8d6a7429a7f512111c 178 Gene3D G3DSA:1.10.520.20 2 107 7.8E-32 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13285 909b2f1775346f8d6a7429a7f512111c 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 176 1.7E-41 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13285 909b2f1775346f8d6a7429a7f512111c 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 4.1E-53 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_03055 a6567b3b0a567dc26997a9f38fa8cd6d 304 Gene3D G3DSA:3.40.50.300 1 229 4.1E-66 T 14-10-2018 C3497_03055 a6567b3b0a567dc26997a9f38fa8cd6d 304 SMART SM00382 26 207 7.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_03055 a6567b3b0a567dc26997a9f38fa8cd6d 304 Pfam PF00005 ABC transporter 18 161 6.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_03055 a6567b3b0a567dc26997a9f38fa8cd6d 304 SUPERFAMILY SSF52540 2 222 3.48E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12000 d76783a78fa127b315f0c218304dba82 302 PIRSF PIRSF006221 6 297 4.6E-86 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 C3497_12000 d76783a78fa127b315f0c218304dba82 302 Pfam PF03881 Fructosamine kinase 9 292 2.2E-91 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 C3497_12000 d76783a78fa127b315f0c218304dba82 302 SUPERFAMILY SSF56112 2 292 1.17E-41 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3497_12000 d76783a78fa127b315f0c218304dba82 302 Gene3D G3DSA:3.90.1200.10 105 297 2.8E-65 T 14-10-2018 C3497_12000 d76783a78fa127b315f0c218304dba82 302 Gene3D G3DSA:3.30.200.20 4 98 3.6E-14 T 14-10-2018 C3497_08830 c0f96fcb9c3cf9a4f822dde59396e86f 123 SUPERFAMILY SSF52172 2 121 1.17E-39 T 14-10-2018 IPR011006 CheY-like superfamily C3497_08830 c0f96fcb9c3cf9a4f822dde59396e86f 123 Pfam PF00072 Response regulator receiver domain 5 117 1.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_08830 c0f96fcb9c3cf9a4f822dde59396e86f 123 SMART SM00448 3 116 1.5E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_08830 c0f96fcb9c3cf9a4f822dde59396e86f 123 Gene3D G3DSA:3.40.50.12740 1 123 2.6E-45 T 14-10-2018 C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 567 895 1.7E-119 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 Gene3D G3DSA:2.60.40.1730 16 198 3.1E-69 T 14-10-2018 C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 Gene3D G3DSA:1.25.50.10 566 895 3.7E-117 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 Gene3D G3DSA:2.60.40.1840 459 564 5.4E-34 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 Gene3D G3DSA:1.10.390.10 284 458 3.6E-67 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 Gene3D G3DSA:1.10.1740.60 200 283 1.8E-35 T 14-10-2018 C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 894 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 459 563 1.0E-30 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 262 272 1.9E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 317 329 1.9E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 180 195 1.9E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 298 313 1.9E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 SUPERFAMILY SSF55486 209 464 1.76E-73 T 14-10-2018 C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 SUPERFAMILY SSF63737 5 197 6.8E-41 T 14-10-2018 C3497_05710 d70f0c7e5d378b3a8d4b32d488443820 896 Pfam PF01433 Peptidase family M1 domain 212 454 9.7E-59 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 C3497_07145 32b1569735805ca81afa1100cfd3ad2b 132 SUPERFAMILY SSF54631 5 129 1.39E-32 T 14-10-2018 C3497_07145 32b1569735805ca81afa1100cfd3ad2b 132 Gene3D G3DSA:3.10.580.10 4 130 2.1E-30 T 14-10-2018 C3497_07145 32b1569735805ca81afa1100cfd3ad2b 132 SMART SM00116 81 128 2.8E-8 T 14-10-2018 IPR000644 CBS domain C3497_07145 32b1569735805ca81afa1100cfd3ad2b 132 SMART SM00116 14 62 0.0011 T 14-10-2018 IPR000644 CBS domain C3497_07145 32b1569735805ca81afa1100cfd3ad2b 132 Pfam PF00571 CBS domain 7 60 2.2E-8 T 14-10-2018 IPR000644 CBS domain C3497_07145 32b1569735805ca81afa1100cfd3ad2b 132 Pfam PF00571 CBS domain 74 128 1.1E-12 T 14-10-2018 IPR000644 CBS domain C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 SUPERFAMILY SSF46557 3 77 2.22E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 Gene3D G3DSA:3.10.50.30 79 158 2.8E-28 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 Gene3D G3DSA:1.10.287.180 1 75 1.0E-30 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 9.5E-55 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 3.7E-31 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 PIRSF PIRSF006092 1 158 1.6E-51 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 157 7.4E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.995 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 C3497_04240 65a06e4c2685edc4f16a733423cfe417 158 SUPERFAMILY SSF54534 83 157 8.89E-24 T 14-10-2018 C3497_01665 23a6f18e5767a3a99ebdfca095031da9 240 SUPERFAMILY SSF52172 7 130 3.42E-36 T 14-10-2018 IPR011006 CheY-like superfamily C3497_01665 23a6f18e5767a3a99ebdfca095031da9 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 233 1.1E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_01665 23a6f18e5767a3a99ebdfca095031da9 240 SUPERFAMILY SSF46894 136 234 4.54E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_01665 23a6f18e5767a3a99ebdfca095031da9 240 Pfam PF00072 Response regulator receiver domain 10 119 9.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01665 23a6f18e5767a3a99ebdfca095031da9 240 Gene3D G3DSA:3.40.50.2300 1 129 5.0E-32 T 14-10-2018 C3497_01665 23a6f18e5767a3a99ebdfca095031da9 240 SMART SM00448 8 118 2.6E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01665 23a6f18e5767a3a99ebdfca095031da9 240 SMART SM00862 160 233 7.1E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_01665 23a6f18e5767a3a99ebdfca095031da9 240 Gene3D G3DSA:1.10.10.10 130 238 9.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 SUPERFAMILY SSF46626 276 363 1.05E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 SUPERFAMILY SSF81464 18 117 3.11E-28 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 194 242 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 249 9.8E-36 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 Gene3D G3DSA:1.10.760.10 263 379 2.1E-29 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 SUPERFAMILY SSF49503 115 313 1.67E-51 T 14-10-2018 IPR008972 Cupredoxin C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 30 108 4.0E-13 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 Gene3D G3DSA:2.60.40.420 120 262 2.2E-52 T 14-10-2018 IPR008972 Cupredoxin C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 36 258 8.3E-59 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 281 355 8.2E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 PRINTS PR01166 Cytochrome c oxidase subunit II signature 169 190 1.5E-37 T 14-10-2018 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 1.5E-37 T 14-10-2018 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 PRINTS PR01166 Cytochrome c oxidase subunit II signature 231 248 1.5E-37 T 14-10-2018 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 1.5E-37 T 14-10-2018 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 1.5E-37 T 14-10-2018 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 PRINTS PR01166 Cytochrome c oxidase subunit II signature 193 213 1.5E-37 T 14-10-2018 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 PRINTS PR01166 Cytochrome c oxidase subunit II signature 213 230 1.5E-37 T 14-10-2018 C3497_01515 5a7fbe8675aecb6a2a2bd972c8022f6f 379 Gene3D G3DSA:1.10.287.90 26 119 3.0E-26 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_00915 1d7422f35c553771e651fedbbf1cb592 218 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 48 129 3.3E-9 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 C3497_00915 1d7422f35c553771e651fedbbf1cb592 218 SUPERFAMILY SSF53474 4 213 5.86E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_00915 1d7422f35c553771e651fedbbf1cb592 218 Gene3D G3DSA:3.40.50.1820 3 216 2.2E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_13615 2204b6585ace58d7bbebf3aeb71a068c 181 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 11 176 16.045 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 C3497_13615 2204b6585ace58d7bbebf3aeb71a068c 181 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 12 174 1.3E-21 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 C3497_13615 2204b6585ace58d7bbebf3aeb71a068c 181 SUPERFAMILY SSF55144 12 176 2.79E-30 T 14-10-2018 IPR009097 Cyclic phosphodiesterase C3497_13615 2204b6585ace58d7bbebf3aeb71a068c 181 Pfam PF13563 2'-5' RNA ligase superfamily 25 141 4.6E-11 T 14-10-2018 C3497_13615 2204b6585ace58d7bbebf3aeb71a068c 181 Gene3D G3DSA:3.90.1140.10 8 176 1.1E-32 T 14-10-2018 C3497_01290 5d128f9e7995d218a5a9e58d522b3558 281 Pfam PF01479 S4 domain 31 73 2.7E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01290 5d128f9e7995d218a5a9e58d522b3558 281 SUPERFAMILY SSF53335 87 274 1.33E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_01290 5d128f9e7995d218a5a9e58d522b3558 281 SUPERFAMILY SSF55174 31 87 7.8E-9 T 14-10-2018 C3497_01290 5d128f9e7995d218a5a9e58d522b3558 281 PIRSF PIRSF005578 26 281 3.3E-92 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 C3497_01290 5d128f9e7995d218a5a9e58d522b3558 281 Gene3D G3DSA:3.40.50.150 90 281 1.3E-65 T 14-10-2018 C3497_01290 5d128f9e7995d218a5a9e58d522b3558 281 SMART SM00363 30 96 3.2E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01290 5d128f9e7995d218a5a9e58d522b3558 281 Pfam PF01728 FtsJ-like methyltransferase 87 273 3.2E-19 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 C3497_01290 5d128f9e7995d218a5a9e58d522b3558 281 Gene3D G3DSA:3.10.290.10 29 89 7.6E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 Pfam PF08521 Two-component sensor kinase N-terminal 10 144 7.9E-17 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 432 4.0E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 SUPERFAMILY SSF47384 205 285 1.06E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 285 1.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 SMART SM00387 333 441 4.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 Gene3D G3DSA:3.30.565.10 293 437 9.1E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 SMART SM00388 222 287 5.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 Gene3D G3DSA:1.10.287.130 170 287 3.9E-21 T 14-10-2018 C3497_01155 f0f9e86f4e983924b51fa75105fa49e4 465 SUPERFAMILY SSF55874 277 434 1.57E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_03995 b5dbc69643ed31bd5ad11c0c4f80c56c 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 1.9E-67 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3497_03995 b5dbc69643ed31bd5ad11c0c4f80c56c 284 SUPERFAMILY SSF48179 185 283 1.36E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_03995 b5dbc69643ed31bd5ad11c0c4f80c56c 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 8.3E-35 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3497_03995 b5dbc69643ed31bd5ad11c0c4f80c56c 284 Gene3D G3DSA:1.10.1040.10 188 284 1.5E-33 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C3497_03995 b5dbc69643ed31bd5ad11c0c4f80c56c 284 PIRSF PIRSF000105 1 284 7.3E-89 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 C3497_03995 b5dbc69643ed31bd5ad11c0c4f80c56c 284 Gene3D G3DSA:3.40.50.720 1 187 3.0E-75 T 14-10-2018 C3497_03995 b5dbc69643ed31bd5ad11c0c4f80c56c 284 SUPERFAMILY SSF51735 1 185 2.89E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_05165 3afb7bf0da54d9c1c83de8494270700a 135 Gene3D G3DSA:2.170.150.20 1 134 7.3E-63 T 14-10-2018 C3497_05165 3afb7bf0da54d9c1c83de8494270700a 135 Pfam PF01641 SelR domain 12 130 8.4E-55 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 C3497_05165 3afb7bf0da54d9c1c83de8494270700a 135 SUPERFAMILY SSF51316 6 133 5.23E-60 T 14-10-2018 IPR011057 Mss4-like superfamily C3497_05165 3afb7bf0da54d9c1c83de8494270700a 135 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 132 9.4E-55 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 C3497_05165 3afb7bf0da54d9c1c83de8494270700a 135 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 8 131 36.878 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 C3497_03865 c0663db0b6e78833c6182777a0b465d6 160 ProSitePatterns PS00855 Signal peptidases II signature. 95 107 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_03865 c0663db0b6e78833c6182777a0b465d6 160 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 153 15.782 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_03865 c0663db0b6e78833c6182777a0b465d6 160 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 128 144 2.3E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_03865 c0663db0b6e78833c6182777a0b465d6 160 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 2.3E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_03865 c0663db0b6e78833c6182777a0b465d6 160 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 92 107 2.3E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_03865 c0663db0b6e78833c6182777a0b465d6 160 Pfam PF01252 Signal peptidase (SPase) II 8 147 1.6E-37 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_03865 c0663db0b6e78833c6182777a0b465d6 160 TIGRFAM TIGR00077 lspA: signal peptidase II 10 150 4.4E-43 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_07115 4d0c8aeae4c219baab1ecc370e9ca5f0 180 SMART SM00116 95 143 6.4E-4 T 14-10-2018 IPR000644 CBS domain C3497_07115 4d0c8aeae4c219baab1ecc370e9ca5f0 180 SMART SM00116 31 78 4.2 T 14-10-2018 IPR000644 CBS domain C3497_07115 4d0c8aeae4c219baab1ecc370e9ca5f0 180 Gene3D G3DSA:3.10.580.10 19 154 1.8E-27 T 14-10-2018 C3497_07115 4d0c8aeae4c219baab1ecc370e9ca5f0 180 SUPERFAMILY SSF54631 21 139 6.7E-27 T 14-10-2018 C3497_07115 4d0c8aeae4c219baab1ecc370e9ca5f0 180 Pfam PF00571 CBS domain 88 139 9.7E-9 T 14-10-2018 IPR000644 CBS domain C3497_07115 4d0c8aeae4c219baab1ecc370e9ca5f0 180 Pfam PF00571 CBS domain 24 75 5.4E-8 T 14-10-2018 IPR000644 CBS domain C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 SUPERFAMILY SSF141371 592 683 1.0E-9 T 14-10-2018 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 Gene3D G3DSA:2.40.10.220 589 697 2.0E-11 T 14-10-2018 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 Pfam PF00535 Glycosyl transferase family 2 157 348 6.2E-35 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 SUPERFAMILY SSF53448 156 451 3.94E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 PRINTS PR01439 Cellulose synthase subunit A signature 494 513 7.8E-22 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 PRINTS PR01439 Cellulose synthase subunit A signature 454 473 7.8E-22 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 PRINTS PR01439 Cellulose synthase subunit A signature 78 98 7.8E-22 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 PRINTS PR01439 Cellulose synthase subunit A signature 106 131 7.8E-22 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 PRINTS PR01439 Cellulose synthase subunit A signature 163 182 7.8E-22 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 PRINTS PR01439 Cellulose synthase subunit A signature 566 587 7.8E-22 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 PRINTS PR01439 Cellulose synthase subunit A signature 425 451 7.8E-22 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 35 732 7.9E-243 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 Pfam PF07238 PilZ domain 593 689 2.2E-11 T 14-10-2018 IPR009875 PilZ domain GO:0035438 C3497_12980 046fc8a5ded1d5afef32c0ba80588eb4 752 Gene3D G3DSA:3.90.550.10 147 385 7.4E-91 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_14720 08fc8672ccc3986a02999bb5cf41b60b 313 SUPERFAMILY SSF50486 207 308 2.75E-29 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 C3497_14720 08fc8672ccc3986a02999bb5cf41b60b 313 Gene3D G3DSA:3.10.25.10 208 311 4.6E-28 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_14720 08fc8672ccc3986a02999bb5cf41b60b 313 Gene3D G3DSA:3.40.50.170 1 207 1.7E-78 T 14-10-2018 C3497_14720 08fc8672ccc3986a02999bb5cf41b60b 313 SUPERFAMILY SSF53328 4 205 4.32E-65 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_14720 08fc8672ccc3986a02999bb5cf41b60b 313 Pfam PF02911 Formyl transferase, C-terminal domain 205 300 6.6E-25 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_14720 08fc8672ccc3986a02999bb5cf41b60b 313 Pfam PF00551 Formyl transferase 7 183 2.8E-45 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_14720 08fc8672ccc3986a02999bb5cf41b60b 313 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 305 3.5E-90 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 C3497_14720 08fc8672ccc3986a02999bb5cf41b60b 313 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_14720 08fc8672ccc3986a02999bb5cf41b60b 313 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 303 35.814 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 SUPERFAMILY SSF52540 194 342 3.46E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 Gene3D G3DSA:3.40.50.2300 1 126 1.6E-36 T 14-10-2018 C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 Pfam PF02954 Bacterial regulatory protein, Fis family 364 404 6.3E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 Pfam PF14532 Sigma-54 interaction domain 137 269 5.2E-18 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 SMART SM00448 2 114 5.9E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 Gene3D G3DSA:1.10.8.60 270 347 5.0E-9 T 14-10-2018 C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 SUPERFAMILY SSF46689 311 406 7.62E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 Gene3D G3DSA:1.10.10.60 354 408 6.0E-15 T 14-10-2018 C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 Gene3D G3DSA:3.40.50.300 131 269 1.2E-13 T 14-10-2018 C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 SUPERFAMILY SSF52172 1 125 7.12E-39 T 14-10-2018 IPR011006 CheY-like superfamily C3497_14360 b137eb15fd14cbe4789d2122c467aff8 415 Pfam PF00072 Response regulator receiver domain 4 115 1.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 422 5.7E-159 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 SUPERFAMILY SSF69304 152 423 7.19E-62 T 14-10-2018 C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 8 421 47.007 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 Gene3D G3DSA:3.40.50.10070 23 162 8.3E-33 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 Pfam PF04052 TolB amino-terminal domain 27 126 6.7E-23 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 Pfam PF07676 WD40-like Beta Propeller Repeat 236 266 3.0E-5 T 14-10-2018 IPR011659 WD40-like Beta Propeller C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 Pfam PF07676 WD40-like Beta Propeller Repeat 275 311 1.9E-15 T 14-10-2018 IPR011659 WD40-like Beta Propeller C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 Pfam PF07676 WD40-like Beta Propeller Repeat 320 353 5.0E-5 T 14-10-2018 IPR011659 WD40-like Beta Propeller C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 Pfam PF07676 WD40-like Beta Propeller Repeat 367 392 2.8E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 Pfam PF07676 WD40-like Beta Propeller Repeat 196 222 2.1E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 SUPERFAMILY SSF52964 32 159 1.31E-30 T 14-10-2018 C3497_00030 469013d0cbf3993b6ea6725ea0a84346 427 Gene3D G3DSA:2.120.10.30 163 426 9.3E-95 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like C3497_05805 7dd63cbe9d2fd5b7e3c83a936843eae2 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 C3497_05805 7dd63cbe9d2fd5b7e3c83a936843eae2 486 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 3.4E-219 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 C3497_05805 7dd63cbe9d2fd5b7e3c83a936843eae2 486 Gene3D G3DSA:3.40.309.10 262 451 1.7E-184 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3497_05805 7dd63cbe9d2fd5b7e3c83a936843eae2 486 SUPERFAMILY SSF53720 8 481 3.14E-173 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3497_05805 7dd63cbe9d2fd5b7e3c83a936843eae2 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 C3497_05805 7dd63cbe9d2fd5b7e3c83a936843eae2 486 Gene3D G3DSA:3.40.605.10 21 474 1.7E-184 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3497_05805 7dd63cbe9d2fd5b7e3c83a936843eae2 486 Pfam PF00171 Aldehyde dehydrogenase family 20 479 1.1E-171 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3497_03660 339a6199002deb9cd6f983bbd30c1bcb 360 Gene3D G3DSA:3.40.190.170 32 336 2.4E-127 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily C3497_03660 339a6199002deb9cd6f983bbd30c1bcb 360 PIRSF PIRSF039026 1 357 6.0E-121 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like C3497_03660 339a6199002deb9cd6f983bbd30c1bcb 360 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 322 8.4E-60 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 C3497_03660 339a6199002deb9cd6f983bbd30c1bcb 360 Gene3D G3DSA:3.40.190.10 152 323 2.4E-127 T 14-10-2018 C3497_04635 3cba576df239264792959c6a78384029 427 SUPERFAMILY SSF52413 299 425 1.7E-26 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 C3497_04635 3cba576df239264792959c6a78384029 427 Gene3D G3DSA:3.40.50.720 1 195 6.9E-57 T 14-10-2018 C3497_04635 3cba576df239264792959c6a78384029 427 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 287 1.0E-23 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_04635 3cba576df239264792959c6a78384029 427 PIRSF PIRSF500136 1 427 8.1E-142 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 C3497_04635 3cba576df239264792959c6a78384029 427 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 315 414 8.5E-20 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_04635 3cba576df239264792959c6a78384029 427 Gene3D G3DSA:3.40.50.720 197 426 9.8E-56 T 14-10-2018 C3497_04635 3cba576df239264792959c6a78384029 427 SMART SM00984 314 414 1.3E-29 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_04635 3cba576df239264792959c6a78384029 427 PIRSF PIRSF000124 3 427 1.3E-54 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C3497_04635 3cba576df239264792959c6a78384029 427 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 177 3.2E-28 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3497_04635 3cba576df239264792959c6a78384029 427 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 393 3.5E-112 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C3497_04635 3cba576df239264792959c6a78384029 427 SUPERFAMILY SSF51735 4 188 1.62E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_04635 3cba576df239264792959c6a78384029 427 SUPERFAMILY SSF48179 198 289 1.09E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_00745 fdee5f799acad5f5d020590f0219eea5 853 Hamap MF_01871 UPF0753 protein . 37 842 22.839 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 C3497_00745 fdee5f799acad5f5d020590f0219eea5 853 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 43 829 4.0E-256 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 C3497_06460 fdc59ef735eebbc790a142bcb2d69c5f 260 Gene3D G3DSA:3.40.50.150 2 244 3.6E-30 T 14-10-2018 C3497_06460 fdc59ef735eebbc790a142bcb2d69c5f 260 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 6 258 26.033 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 C3497_06460 fdc59ef735eebbc790a142bcb2d69c5f 260 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 14 255 2.0E-55 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 C3497_06460 fdc59ef735eebbc790a142bcb2d69c5f 260 Pfam PF08241 Methyltransferase domain 53 140 3.7E-18 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C3497_06460 fdc59ef735eebbc790a142bcb2d69c5f 260 SUPERFAMILY SSF53335 11 248 3.31E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 425 591 9.5E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 SUPERFAMILY SSF103190 88 175 1.1E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 Pfam PF02743 Cache domain 36 257 4.1E-25 T 14-10-2018 IPR033479 Double Cache domain 1 C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 SMART SM00283 364 625 4.1E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 Gene3D G3DSA:3.30.450.20 63 168 1.1E-45 T 14-10-2018 C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 SUPERFAMILY SSF58104 317 626 8.37E-67 T 14-10-2018 C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 SMART SM00304 295 349 9.8E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 SMART SM00304 356 409 69.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 Gene3D G3DSA:1.10.287.950 295 626 2.4E-66 T 14-10-2018 C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 Pfam PF00672 HAMP domain 296 346 2.1E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05850 3d8e56049b9c91db56dc94b00cc884c2 626 Gene3D G3DSA:3.30.450.20 50 269 1.1E-45 T 14-10-2018 C3497_00130 20569b618cf69c38e10550d4d9695247 467 Gene3D G3DSA:1.10.275.10 4 141 2.1E-59 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal C3497_00130 20569b618cf69c38e10550d4d9695247 467 SUPERFAMILY SSF48557 5 459 4.27E-147 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 C3497_00130 20569b618cf69c38e10550d4d9695247 467 Gene3D G3DSA:1.10.40.30 410 461 1.6E-17 T 14-10-2018 C3497_00130 20569b618cf69c38e10550d4d9695247 467 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 1.4E-30 T 14-10-2018 IPR000362 Fumarate lyase family C3497_00130 20569b618cf69c38e10550d4d9695247 467 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 1.4E-30 T 14-10-2018 IPR000362 Fumarate lyase family C3497_00130 20569b618cf69c38e10550d4d9695247 467 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 1.4E-30 T 14-10-2018 IPR000362 Fumarate lyase family C3497_00130 20569b618cf69c38e10550d4d9695247 467 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 1.4E-30 T 14-10-2018 IPR000362 Fumarate lyase family C3497_00130 20569b618cf69c38e10550d4d9695247 467 Pfam PF10415 Fumarase C C-terminus 410 462 1.2E-18 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3497_00130 20569b618cf69c38e10550d4d9695247 467 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 465 2.9E-208 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 C3497_00130 20569b618cf69c38e10550d4d9695247 467 Gene3D G3DSA:1.20.200.10 142 409 2.3E-111 T 14-10-2018 C3497_00130 20569b618cf69c38e10550d4d9695247 467 Pfam PF00206 Lyase 13 344 2.1E-101 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal C3497_00130 20569b618cf69c38e10550d4d9695247 467 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 C3497_13710 6278c71d42d995eec880e361e0ac0d17 317 Pfam PF13460 NAD(P)H-binding 10 205 3.1E-25 T 14-10-2018 IPR016040 NAD(P)-binding domain C3497_13710 6278c71d42d995eec880e361e0ac0d17 317 Gene3D G3DSA:3.40.50.720 5 295 1.8E-57 T 14-10-2018 C3497_13710 6278c71d42d995eec880e361e0ac0d17 317 SUPERFAMILY SSF51735 4 274 1.89E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_11990 996872a88d693c959de4c86ffc3a45d1 243 Pfam PF04397 LytTr DNA-binding domain 146 241 4.2E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 C3497_11990 996872a88d693c959de4c86ffc3a45d1 243 Gene3D G3DSA:2.40.50.40 140 203 5.0E-7 T 14-10-2018 C3497_11990 996872a88d693c959de4c86ffc3a45d1 243 Pfam PF00072 Response regulator receiver domain 6 116 5.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_11990 996872a88d693c959de4c86ffc3a45d1 243 Gene3D G3DSA:3.40.50.2300 1 139 5.6E-28 T 14-10-2018 C3497_11990 996872a88d693c959de4c86ffc3a45d1 243 SUPERFAMILY SSF52172 1 126 4.41E-29 T 14-10-2018 IPR011006 CheY-like superfamily C3497_11990 996872a88d693c959de4c86ffc3a45d1 243 SMART SM00448 4 115 4.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_11990 996872a88d693c959de4c86ffc3a45d1 243 SMART SM00850 144 242 1.6E-26 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 C3497_10725 56929282e6863765bb77ba783266c0c9 146 PRINTS PR00421 Thioredoxin family signature 68 77 1.4E-9 T 14-10-2018 C3497_10725 56929282e6863765bb77ba783266c0c9 146 PRINTS PR00421 Thioredoxin family signature 60 68 1.4E-9 T 14-10-2018 C3497_10725 56929282e6863765bb77ba783266c0c9 146 PRINTS PR00421 Thioredoxin family signature 108 119 1.4E-9 T 14-10-2018 C3497_10725 56929282e6863765bb77ba783266c0c9 146 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 142 6.6E-34 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3497_10725 56929282e6863765bb77ba783266c0c9 146 Pfam PF00085 Thioredoxin 42 142 9.6E-30 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C3497_10725 56929282e6863765bb77ba783266c0c9 146 Gene3D G3DSA:3.40.30.10 39 144 4.0E-33 T 14-10-2018 C3497_10725 56929282e6863765bb77ba783266c0c9 146 ProSitePatterns PS00194 Thioredoxin family active site. 61 79 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3497_10725 56929282e6863765bb77ba783266c0c9 146 SUPERFAMILY SSF52833 28 145 1.48E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_10725 56929282e6863765bb77ba783266c0c9 146 Gene3D G3DSA:2.20.28.140 2 38 6.5E-16 T 14-10-2018 C3497_10725 56929282e6863765bb77ba783266c0c9 146 PIRSF PIRSF000077 38 144 1.2E-33 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3497_10560 f31bd0bde5807edf30f97f5335a9b92f 443 SUPERFAMILY SSF51905 16 427 4.66E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_10560 f31bd0bde5807edf30f97f5335a9b92f 443 Pfam PF01593 Flavin containing amine oxidoreductase 24 275 2.1E-17 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 C3497_10560 f31bd0bde5807edf30f97f5335a9b92f 443 Gene3D G3DSA:3.90.660.10 51 221 4.1E-23 T 14-10-2018 C3497_10560 f31bd0bde5807edf30f97f5335a9b92f 443 Gene3D G3DSA:3.50.50.60 17 281 4.1E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_10560 f31bd0bde5807edf30f97f5335a9b92f 443 Gene3D G3DSA:1.10.405.10 123 210 4.1E-23 T 14-10-2018 C3497_14045 e51a27ed6c763fd3eb4f6eab14c2a357 537 Pfam PF01740 STAS domain 423 493 1.6E-11 T 14-10-2018 IPR002645 STAS domain C3497_14045 e51a27ed6c763fd3eb4f6eab14c2a357 537 Gene3D G3DSA:3.30.750.24 409 529 1.9E-18 T 14-10-2018 IPR036513 STAS domain superfamily C3497_14045 e51a27ed6c763fd3eb4f6eab14c2a357 537 SUPERFAMILY SSF52091 421 523 2.35E-11 T 14-10-2018 IPR036513 STAS domain superfamily C3497_14045 e51a27ed6c763fd3eb4f6eab14c2a357 537 Pfam PF00916 Sulfate permease family 10 368 4.2E-74 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 C3497_08415 f0906deb7d1d0e2a10fe3f086df2209b 407 TIGRFAM TIGR00277 HDIG: HDIG domain 164 254 3.5E-10 T 14-10-2018 IPR006675 HDIG domain C3497_08415 f0906deb7d1d0e2a10fe3f086df2209b 407 Pfam PF13487 HD domain 215 277 5.0E-15 T 14-10-2018 C3497_08415 f0906deb7d1d0e2a10fe3f086df2209b 407 SUPERFAMILY SSF109604 159 324 5.8E-34 T 14-10-2018 C3497_08415 f0906deb7d1d0e2a10fe3f086df2209b 407 Gene3D G3DSA:1.10.3210.10 30 327 2.7E-76 T 14-10-2018 C3497_08415 f0906deb7d1d0e2a10fe3f086df2209b 407 SMART SM00471 160 296 7.0E-9 T 14-10-2018 IPR003607 HD/PDEase domain C3497_08415 f0906deb7d1d0e2a10fe3f086df2209b 407 Pfam PF11871 Domain of unknown function (DUF3391) 2 133 1.6E-40 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 C3497_10590 97b6dc5cb48cedbc01c874843f104cdf 411 Gene3D G3DSA:3.40.50.2300 181 312 4.7E-72 T 14-10-2018 C3497_10590 97b6dc5cb48cedbc01c874843f104cdf 411 Pfam PF13458 Periplasmic binding protein 63 398 4.0E-55 T 14-10-2018 IPR028081 Leucine-binding protein domain C3497_10590 97b6dc5cb48cedbc01c874843f104cdf 411 SUPERFAMILY SSF53822 62 406 4.85E-72 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_10590 97b6dc5cb48cedbc01c874843f104cdf 411 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 294 312 5.4E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_10590 97b6dc5cb48cedbc01c874843f104cdf 411 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 105 123 5.4E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_10590 97b6dc5cb48cedbc01c874843f104cdf 411 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 64 80 5.4E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_10590 97b6dc5cb48cedbc01c874843f104cdf 411 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 86 102 5.4E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_10590 97b6dc5cb48cedbc01c874843f104cdf 411 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 126 136 5.4E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_10590 97b6dc5cb48cedbc01c874843f104cdf 411 Gene3D G3DSA:3.40.50.2300 65 383 4.7E-72 T 14-10-2018 C3497_02420 0d3547c29169ac787fbaf8c7269c2662 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 109 124 3.3E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_02420 0d3547c29169ac787fbaf8c7269c2662 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 145 161 3.3E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_02420 0d3547c29169ac787fbaf8c7269c2662 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 62 70 3.3E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_02420 0d3547c29169ac787fbaf8c7269c2662 173 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 16 170 15.461 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_02420 0d3547c29169ac787fbaf8c7269c2662 173 TIGRFAM TIGR00077 lspA: signal peptidase II 17 164 5.2E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_02420 0d3547c29169ac787fbaf8c7269c2662 173 Pfam PF01252 Signal peptidase (SPase) II 25 163 3.6E-36 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 403 7.2E-37 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 PRINTS PR00981 Seryl-tRNA synthetase signature 355 371 4.8E-35 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 PRINTS PR00981 Seryl-tRNA synthetase signature 280 293 4.8E-35 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 PRINTS PR00981 Seryl-tRNA synthetase signature 337 353 4.8E-35 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 PRINTS PR00981 Seryl-tRNA synthetase signature 268 280 4.8E-35 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 PRINTS PR00981 Seryl-tRNA synthetase signature 320 333 4.8E-35 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 PIRSF PIRSF001529 1 429 1.3E-178 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 SUPERFAMILY SSF55681 116 423 4.98E-104 T 14-10-2018 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.9E-29 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 Gene3D G3DSA:1.10.287.40 1 104 3.3E-21 T 14-10-2018 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 Gene3D G3DSA:3.30.930.10 105 429 1.1E-119 T 14-10-2018 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 SUPERFAMILY SSF46589 1 112 1.05E-29 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 420 4.8E-164 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3497_11755 ad025ce9d4d79f687c144219b9bbefef 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 425 40.177 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3497_06175 2c0de5abc837c7183e7ae829ff0dd797 96 Gene3D G3DSA:3.30.70.20 5 50 4.4E-7 T 14-10-2018 C3497_06175 2c0de5abc837c7183e7ae829ff0dd797 96 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 72 83 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_06175 2c0de5abc837c7183e7ae829ff0dd797 96 Pfam PF12838 4Fe-4S dicluster domain 26 85 1.4E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_06175 2c0de5abc837c7183e7ae829ff0dd797 96 SUPERFAMILY SSF54862 17 92 5.44E-18 T 14-10-2018 C3497_06175 2c0de5abc837c7183e7ae829ff0dd797 96 Gene3D G3DSA:3.30.70.20 52 89 2.0E-5 T 14-10-2018 C3497_06175 2c0de5abc837c7183e7ae829ff0dd797 96 TIGRFAM TIGR02936 fdxN_nitrog: ferredoxin III, nif-specific 6 90 9.0E-34 T 14-10-2018 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific C3497_08235 a424bc7a28b4ceb76af1a00152b93454 392 TIGRFAM TIGR02221 cas_TM1812: CRISPR-associated protein, TM1812 family 3 223 7.2E-67 T 14-10-2018 IPR011742 CRISPR-associated protein, TM1812 C3497_08235 a424bc7a28b4ceb76af1a00152b93454 392 TIGRFAM TIGR02549 CRISPR_DxTHG: CRISPR-associated DxTHG motif protein 141 159 3.9E-6 T 14-10-2018 IPR013383 CRISPR-associated protein DxTHG, conserved site C3497_08235 a424bc7a28b4ceb76af1a00152b93454 392 SUPERFAMILY SSF160980 17 170 8.11E-6 T 14-10-2018 C3497_08235 a424bc7a28b4ceb76af1a00152b93454 392 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 4 362 1.2E-34 T 14-10-2018 IPR019016 CRISPR-associated DxTHG protein C3497_13500 98e80c7710a69bfbf3c3e78463455a87 490 Gene3D G3DSA:1.20.1600.10 65 477 2.0E-111 T 14-10-2018 C3497_13500 98e80c7710a69bfbf3c3e78463455a87 490 SUPERFAMILY SSF56954 17 479 1.7E-92 T 14-10-2018 C3497_13500 98e80c7710a69bfbf3c3e78463455a87 490 Gene3D G3DSA:2.20.200.10 112 365 2.0E-111 T 14-10-2018 C3497_13500 98e80c7710a69bfbf3c3e78463455a87 490 Pfam PF02321 Outer membrane efflux protein 76 264 1.0E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_13500 98e80c7710a69bfbf3c3e78463455a87 490 Pfam PF02321 Outer membrane efflux protein 294 474 5.1E-20 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_13500 98e80c7710a69bfbf3c3e78463455a87 490 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 24 476 1.9E-98 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 C3497_10610 75bb305dfb4b071a4b352ceef2710796 1311 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 962 1310 5.7E-44 T 14-10-2018 IPR007452 Translocation and assembly module TamB C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 6.6E-67 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 Gene3D G3DSA:3.90.226.10 1 318 1.1E-123 T 14-10-2018 C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.1E-153 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 SUPERFAMILY SSF52096 5 316 1.25E-104 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.651 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.1E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.1E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.1E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.1E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.1E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_02745 f3010eebdbbd2aa7f54b3bb1396ebd2f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.1E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 SMART SM00283 522 769 5.4E-78 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 Gene3D G3DSA:1.10.287.950 468 771 8.7E-80 T 14-10-2018 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 SUPERFAMILY SSF58104 490 770 3.4E-67 T 14-10-2018 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 Pfam PF00672 HAMP domain 248 294 3.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 Pfam PF08447 PAS fold 31 114 2.7E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 SUPERFAMILY SSF55785 19 115 8.72E-27 T 14-10-2018 IPR035965 PAS domain superfamily C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 Gene3D G3DSA:3.30.450.20 305 425 6.4E-33 T 14-10-2018 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 114 6.1E-13 T 14-10-2018 IPR000014 PAS domain C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 581 737 6.6E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 Pfam PF13426 PAS domain 326 424 6.7E-4 T 14-10-2018 IPR000014 PAS domain C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 SMART SM00304 247 299 3.3E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 SMART SM00304 469 521 0.073 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 Gene3D G3DSA:3.30.450.20 15 138 2.4E-25 T 14-10-2018 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 Gene3D G3DSA:1.20.1480.50 209 304 1.3E-11 T 14-10-2018 C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 SUPERFAMILY SSF55785 302 417 4.89E-8 T 14-10-2018 IPR035965 PAS domain superfamily C3497_05945 36e9d38d7d11a7e5e7daa60ae48abccb 832 SUPERFAMILY SSF158472 249 294 1.7E-7 T 14-10-2018 C3497_10385 5b4dfa444db82ba498ac38440f841cd4 600 Pfam PF13537 Glutamine amidotransferase domain 71 128 6.5E-9 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain C3497_10385 5b4dfa444db82ba498ac38440f841cd4 600 Gene3D G3DSA:3.60.20.10 64 185 4.1E-18 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_10385 5b4dfa444db82ba498ac38440f841cd4 600 SUPERFAMILY SSF56235 72 187 1.93E-18 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_10385 5b4dfa444db82ba498ac38440f841cd4 600 Pfam PF00733 Asparagine synthase 206 584 6.8E-69 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 C3497_10385 5b4dfa444db82ba498ac38440f841cd4 600 PIRSF PIRSF001589 64 600 3.9E-77 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 C3497_10385 5b4dfa444db82ba498ac38440f841cd4 600 SUPERFAMILY SSF52402 182 583 1.05E-59 T 14-10-2018 C3497_12445 d91f52640d19bec8b42cc61803444932 174 Pfam PF10649 Protein of unknown function (DUF2478) 8 166 7.7E-58 T 14-10-2018 IPR018912 Protein of unknown function DUF2478 C3497_06760 d05f698ae8e79ad0d0fc66130931f50d 306 SUPERFAMILY SSF46785 4 111 1.32E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_06760 d05f698ae8e79ad0d0fc66130931f50d 306 Pfam PF03466 LysR substrate binding domain 87 295 2.8E-47 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_06760 d05f698ae8e79ad0d0fc66130931f50d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_06760 d05f698ae8e79ad0d0fc66130931f50d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_06760 d05f698ae8e79ad0d0fc66130931f50d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_06760 d05f698ae8e79ad0d0fc66130931f50d 306 SUPERFAMILY SSF53850 86 298 8.69E-46 T 14-10-2018 C3497_06760 d05f698ae8e79ad0d0fc66130931f50d 306 Gene3D G3DSA:1.10.10.10 1 92 6.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_06760 d05f698ae8e79ad0d0fc66130931f50d 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.0E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_06760 d05f698ae8e79ad0d0fc66130931f50d 306 Gene3D G3DSA:3.40.190.290 93 302 1.5E-40 T 14-10-2018 C3497_12025 2fb290ff6e4f64d7d51d358008919ec9 110 PIRSF PIRSF005894 1 108 4.2E-50 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 C3497_12025 2fb290ff6e4f64d7d51d358008919ec9 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 1.1E-46 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related C3497_12025 2fb290ff6e4f64d7d51d358008919ec9 110 Pfam PF00462 Glutaredoxin 16 81 1.1E-19 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 C3497_12025 2fb290ff6e4f64d7d51d358008919ec9 110 Gene3D G3DSA:3.40.30.10 6 102 3.4E-34 T 14-10-2018 C3497_12025 2fb290ff6e4f64d7d51d358008919ec9 110 SUPERFAMILY SSF52833 1 105 5.64E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 Gene3D G3DSA:3.40.50.300 26 269 1.1E-81 T 14-10-2018 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 PRINTS PR00142 RecA protein signature 94 123 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 PRINTS PR00142 RecA protein signature 244 273 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 PRINTS PR00142 RecA protein signature 128 157 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 PRINTS PR00142 RecA protein signature 211 239 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 PRINTS PR00142 RecA protein signature 298 315 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 PRINTS PR00142 RecA protein signature 166 195 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 SUPERFAMILY SSF52540 4 268 7.63E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 Hamap MF_00268 Protein RecA [recA]. 5 330 51.823 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 Pfam PF00154 recA bacterial DNA recombination protein 7 269 7.5E-143 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 SUPERFAMILY SSF54752 269 327 4.84E-22 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 SMART SM00382 58 229 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 ProSitePatterns PS00321 recA signature. 214 222 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.8E-171 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3497_13640 392a1e007c01156c39889d94cbc7aeb4 344 Gene3D G3DSA:3.30.250.10 270 340 1.0E-28 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal C3497_08200 2115df0a6d3aa79589a7c99f168f7d91 379 Gene3D G3DSA:3.30.70.2950 267 357 4.4E-8 T 14-10-2018 C3497_08200 2115df0a6d3aa79589a7c99f168f7d91 379 Pfam PF09700 CRISPR-associated protein (Cas_Cmr3) 9 378 5.9E-64 T 14-10-2018 IPR019117 CRISPR-associated protein, Cmr3 C3497_11650 421ef9b541a8eb70afe0f326139dfa9e 582 Pfam PF03471 Transporter associated domain 501 572 5.6E-5 T 14-10-2018 IPR005170 Transporter-associated domain C3497_11650 421ef9b541a8eb70afe0f326139dfa9e 582 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 1.5E-43 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 C3497_11650 421ef9b541a8eb70afe0f326139dfa9e 582 SMART SM01091 497 577 4.6E-6 T 14-10-2018 IPR005170 Transporter-associated domain C3497_11650 421ef9b541a8eb70afe0f326139dfa9e 582 Gene3D G3DSA:1.20.1530.20 5 390 4.5E-18 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C3497_04730 b1e67324c1fb86fcf76d2c900be778bf 265 Pfam PF13444 Acetyltransferase (GNAT) domain 34 136 2.6E-18 T 14-10-2018 C3497_04730 b1e67324c1fb86fcf76d2c900be778bf 265 TIGRFAM TIGR03694 exosort_acyl: N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated 12 243 8.3E-77 T 14-10-2018 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted C3497_04730 b1e67324c1fb86fcf76d2c900be778bf 265 Gene3D G3DSA:3.40.630.30 20 230 7.7E-45 T 14-10-2018 C3497_04730 b1e67324c1fb86fcf76d2c900be778bf 265 SUPERFAMILY SSF55729 15 236 5.13E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 SUPERFAMILY SSF54631 165 306 2.93E-30 T 14-10-2018 C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 Gene3D G3DSA:1.25.60.10 35 161 3.2E-18 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 Pfam PF01769 Divalent cation transporter 351 472 1.1E-25 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 SUPERFAMILY SSF161093 308 479 3.53E-49 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 Gene3D G3DSA:1.10.357.20 305 479 2.5E-47 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 Pfam PF03448 MgtE intracellular N domain 63 164 1.2E-25 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 Gene3D G3DSA:3.10.580.10 162 290 2.3E-41 T 14-10-2018 C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 TIGRFAM TIGR00400 mgtE: magnesium transporter 44 479 4.1E-86 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 SMART SM00116 238 286 1.5E-4 T 14-10-2018 IPR000644 CBS domain C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 SMART SM00116 173 226 0.12 T 14-10-2018 IPR000644 CBS domain C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 SMART SM00924 63 166 1.8E-35 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 SUPERFAMILY SSF158791 42 163 6.8E-28 T 14-10-2018 C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 Pfam PF00571 CBS domain 166 222 1.8E-6 T 14-10-2018 IPR000644 CBS domain C3497_12490 78ae35ea57fa4d94bcb680540dafc1ac 480 Pfam PF00571 CBS domain 230 285 6.1E-8 T 14-10-2018 IPR000644 CBS domain C3497_01645 0b3d62d787a162f9b14a6b9c740a6268 510 Gene3D G3DSA:3.90.226.10 257 510 9.8E-96 T 14-10-2018 C3497_01645 0b3d62d787a162f9b14a6b9c740a6268 510 SUPERFAMILY SSF52096 3 254 3.13E-80 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_01645 0b3d62d787a162f9b14a6b9c740a6268 510 SUPERFAMILY SSF52096 223 510 1.43E-90 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_01645 0b3d62d787a162f9b14a6b9c740a6268 510 Gene3D G3DSA:3.90.226.10 1 256 4.0E-98 T 14-10-2018 C3497_01645 0b3d62d787a162f9b14a6b9c740a6268 510 Pfam PF01039 Carboxyl transferase domain 27 508 3.2E-200 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 SUPERFAMILY SSF52172 7 138 7.68E-22 T 14-10-2018 IPR011006 CheY-like superfamily C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 Gene3D G3DSA:1.25.40.10 300 493 5.7E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 Gene3D G3DSA:1.25.40.10 140 299 2.2E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 SUPERFAMILY SSF48452 135 293 1.9E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 Pfam PF13432 Tetratricopeptide repeat 137 192 0.0011 T 14-10-2018 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 Pfam PF13432 Tetratricopeptide repeat 201 262 2.5E-5 T 14-10-2018 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 SMART SM00028 164 197 8.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 SMART SM00028 231 264 38.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 SUPERFAMILY SSF48452 342 487 7.37E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 Gene3D G3DSA:3.40.50.2300 4 139 2.0E-19 T 14-10-2018 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 Pfam PF00072 Response regulator receiver domain 9 123 1.7E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_10305 7e1e72aa0a623ac9aae9b1a7c4099855 549 SMART SM00448 7 123 1.6E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 SUPERFAMILY SSF143724 118 323 1.67E-67 T 14-10-2018 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 Gene3D G3DSA:3.30.870.10 510 691 3.7E-63 T 14-10-2018 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 Gene3D G3DSA:3.30.1840.10 8 322 1.2E-104 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 Gene3D G3DSA:3.30.870.10 327 509 2.1E-74 T 14-10-2018 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 Pfam PF13090 Polyphosphate kinase C-terminal domain 340 682 1.2E-150 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 SUPERFAMILY SSF140356 13 116 8.5E-36 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 Pfam PF02503 Polyphosphate kinase middle domain 130 330 1.6E-63 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 SUPERFAMILY SSF56024 510 682 5.16E-66 T 14-10-2018 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 SUPERFAMILY SSF56024 324 502 9.73E-60 T 14-10-2018 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 15 685 5.8E-294 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 PIRSF PIRSF015589 1 693 6.4E-276 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 Pfam PF13089 Polyphosphate kinase N-terminal domain 15 120 2.6E-35 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 C3497_06565 95c3f3f8f1091ace06f3814cc3e28c5d 693 Hamap MF_00347 Polyphosphate kinase [ppk]. 12 691 28.252 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C3497_05830 a80fe7bc20b3ebb077609b87970b504b 240 SMART SM00382 43 231 2.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_05830 a80fe7bc20b3ebb077609b87970b504b 240 Gene3D G3DSA:3.40.50.300 11 237 6.7E-68 T 14-10-2018 C3497_05830 a80fe7bc20b3ebb077609b87970b504b 240 Pfam PF00005 ABC transporter 34 180 1.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_05830 a80fe7bc20b3ebb077609b87970b504b 240 SUPERFAMILY SSF52540 13 234 7.27E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05830 a80fe7bc20b3ebb077609b87970b504b 240 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_10475 2962efbaa82b0e5862740b13683bb56b 363 SMART SM00382 42 207 6.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10475 2962efbaa82b0e5862740b13683bb56b 363 SUPERFAMILY SSF52540 6 265 9.89E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10475 2962efbaa82b0e5862740b13683bb56b 363 Pfam PF13401 AAA domain 42 171 1.6E-24 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10475 2962efbaa82b0e5862740b13683bb56b 363 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 269 8.9E-129 T 14-10-2018 IPR017466 ATPase, secretion system, PEP-CTERM, predicted C3497_10475 2962efbaa82b0e5862740b13683bb56b 363 Gene3D G3DSA:3.40.50.300 29 185 3.3E-12 T 14-10-2018 C3497_04005 50a88097b539179a9b390fcb5854ad1c 108 PRINTS PR00421 Thioredoxin family signature 32 41 7.7E-10 T 14-10-2018 C3497_04005 50a88097b539179a9b390fcb5854ad1c 108 PRINTS PR00421 Thioredoxin family signature 24 32 7.7E-10 T 14-10-2018 C3497_04005 50a88097b539179a9b390fcb5854ad1c 108 PRINTS PR00421 Thioredoxin family signature 72 83 7.7E-10 T 14-10-2018 C3497_04005 50a88097b539179a9b390fcb5854ad1c 108 PIRSF PIRSF000077 2 108 3.6E-45 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3497_04005 50a88097b539179a9b390fcb5854ad1c 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3497_04005 50a88097b539179a9b390fcb5854ad1c 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.9E-40 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3497_04005 50a88097b539179a9b390fcb5854ad1c 108 SUPERFAMILY SSF52833 3 108 3.19E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_04005 50a88097b539179a9b390fcb5854ad1c 108 Pfam PF00085 Thioredoxin 5 106 4.5E-35 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C3497_04005 50a88097b539179a9b390fcb5854ad1c 108 Gene3D G3DSA:3.40.30.10 5 108 5.0E-36 T 14-10-2018 C3497_07870 583f0363c7a7f7644ca85701e9313969 251 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_07870 583f0363c7a7f7644ca85701e9313969 251 SMART SM00382 26 209 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_07870 583f0363c7a7f7644ca85701e9313969 251 Pfam PF00005 ABC transporter 17 160 5.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_07870 583f0363c7a7f7644ca85701e9313969 251 SUPERFAMILY SSF52540 2 221 3.13E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07870 583f0363c7a7f7644ca85701e9313969 251 TIGRFAM TIGR03864 PQQ_ABC_ATP: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system 1 234 4.0E-94 T 14-10-2018 IPR022467 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system C3497_07870 583f0363c7a7f7644ca85701e9313969 251 Gene3D G3DSA:3.40.50.300 1 236 4.7E-62 T 14-10-2018 C3497_04950 c43740ec9000456fd5930ee276770480 153 SUPERFAMILY SSF69500 1 149 7.06E-50 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily C3497_04950 c43740ec9000456fd5930ee276770480 153 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 149 32.085 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 C3497_04950 c43740ec9000456fd5930ee276770480 153 Gene3D G3DSA:3.50.80.10 1 151 2.0E-50 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily C3497_04950 c43740ec9000456fd5930ee276770480 153 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 148 7.5E-52 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 C3497_04950 c43740ec9000456fd5930ee276770480 153 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 149 1.4E-45 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 C3497_06985 b2223a711edece7f72efaeb887e3d177 96 Pfam PF01909 Nucleotidyltransferase domain 18 93 1.5E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 C3497_06985 b2223a711edece7f72efaeb887e3d177 96 Gene3D G3DSA:3.30.460.10 4 96 1.3E-20 T 14-10-2018 C3497_06985 b2223a711edece7f72efaeb887e3d177 96 SUPERFAMILY SSF81301 3 95 5.72E-18 T 14-10-2018 C3497_00060 5b20b9c7ddb5b48c6bc9a42159735368 178 SUPERFAMILY SSF56235 3 177 1.77E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_00060 5b20b9c7ddb5b48c6bc9a42159735368 178 PIRSF PIRSF039093 1 178 9.3E-87 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 C3497_00060 5b20b9c7ddb5b48c6bc9a42159735368 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 41.32 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 C3497_00060 5b20b9c7ddb5b48c6bc9a42159735368 178 Pfam PF00227 Proteasome subunit 5 174 3.6E-22 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 C3497_00060 5b20b9c7ddb5b48c6bc9a42159735368 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 2.3E-85 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 C3497_00060 5b20b9c7ddb5b48c6bc9a42159735368 178 Gene3D G3DSA:3.60.20.10 2 178 2.9E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_11200 2cd46e8e817fb581f7512acb10f81ccc 149 Pfam PF07511 Protein of unknown function (DUF1525) 36 146 4.6E-42 T 14-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 C3497_11200 2cd46e8e817fb581f7512acb10f81ccc 149 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 36 145 7.7E-42 T 14-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 SMART SM01130 1 289 2.2E-143 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 66.492 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 SUPERFAMILY SSF51569 1 289 5.23E-105 T 14-10-2018 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 7.0E-110 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.4E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.4E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.4E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.4E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 Gene3D G3DSA:3.20.20.70 1 291 3.3E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 PIRSF PIRSF001365 1 292 6.7E-93 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_09415 a55def0830e9f8b9bd961d5f38f56930 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 8.3E-102 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3497_13150 27de81669f3f442f687b144550203fd3 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 3.3E-72 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 C3497_13150 27de81669f3f442f687b144550203fd3 204 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 37.072 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 C3497_13150 27de81669f3f442f687b144550203fd3 204 SMART SM00072 2 184 3.7E-64 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit C3497_13150 27de81669f3f442f687b144550203fd3 204 Gene3D G3DSA:3.40.50.300 7 180 8.2E-67 T 14-10-2018 C3497_13150 27de81669f3f442f687b144550203fd3 204 SUPERFAMILY SSF52540 3 186 8.6E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13150 27de81669f3f442f687b144550203fd3 204 Pfam PF00625 Guanylate kinase 4 182 6.6E-48 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit C3497_13150 27de81669f3f442f687b144550203fd3 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 C3497_13150 27de81669f3f442f687b144550203fd3 204 Gene3D G3DSA:3.30.63.10 34 93 8.2E-67 T 14-10-2018 C3497_07700 53622593f0c80d292154b59028c0f580 740 SUPERFAMILY SSF56935 29 740 1.81E-122 T 14-10-2018 C3497_07700 53622593f0c80d292154b59028c0f580 740 Gene3D G3DSA:2.40.170.20 177 740 3.1E-121 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3497_07700 53622593f0c80d292154b59028c0f580 740 Gene3D G3DSA:2.170.130.10 46 175 3.4E-38 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_07700 53622593f0c80d292154b59028c0f580 740 Pfam PF00593 TonB dependent receptor 246 738 1.3E-52 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_07700 53622593f0c80d292154b59028c0f580 740 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 740 3.8E-87 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 C3497_07700 53622593f0c80d292154b59028c0f580 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 162 9.9E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_08140 832e14b540e1415f4e8f9bb0881f94f0 208 Gene3D G3DSA:3.40.50.300 6 203 5.6E-51 T 14-10-2018 C3497_08140 832e14b540e1415f4e8f9bb0881f94f0 208 PIRSF PIRSF005624 1 207 5.9E-49 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 C3497_08140 832e14b540e1415f4e8f9bb0881f94f0 208 Hamap MF_01389 Urease accessory protein UreG [ureG]. 5 203 47.894 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 C3497_08140 832e14b540e1415f4e8f9bb0881f94f0 208 SUPERFAMILY SSF52540 3 198 3.01E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_08140 832e14b540e1415f4e8f9bb0881f94f0 208 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 179 7.2E-37 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain C3497_08140 832e14b540e1415f4e8f9bb0881f94f0 208 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 7 203 6.0E-104 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 C3497_01175 176fb1abd39af873b8fe3687c4c5407e 101 Pfam PF03413 Peptidase propeptide and YPEB domain 38 94 5.9E-10 T 14-10-2018 IPR025711 PepSY domain C3497_01175 176fb1abd39af873b8fe3687c4c5407e 101 Gene3D G3DSA:3.10.450.40 28 99 7.6E-9 T 14-10-2018 C3497_10070 ab8a0db14dd4ed0c92641e1c40f20af9 1169 Gene3D G3DSA:3.20.20.140 2 278 1.1E-85 T 14-10-2018 C3497_10070 ab8a0db14dd4ed0c92641e1c40f20af9 1169 Pfam PF01336 OB-fold nucleic acid binding domain 998 1075 3.1E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 C3497_10070 ab8a0db14dd4ed0c92641e1c40f20af9 1169 Pfam PF02811 PHP domain 15 181 1.1E-40 T 14-10-2018 IPR004013 PHP domain GO:0003824 C3497_10070 ab8a0db14dd4ed0c92641e1c40f20af9 1169 Gene3D G3DSA:1.10.10.1600 442 524 3.0E-23 T 14-10-2018 C3497_10070 ab8a0db14dd4ed0c92641e1c40f20af9 1169 SMART SM00481 14 81 1.9E-21 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal C3497_10070 ab8a0db14dd4ed0c92641e1c40f20af9 1169 SUPERFAMILY SSF89550 13 271 6.28E-15 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 C3497_10070 ab8a0db14dd4ed0c92641e1c40f20af9 1169 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 740 5.4E-170 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_10070 ab8a0db14dd4ed0c92641e1c40f20af9 1169 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 13 1034 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_10070 ab8a0db14dd4ed0c92641e1c40f20af9 1169 Pfam PF14579 Helix-hairpin-helix motif 814 902 1.6E-27 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_00630 e27061c2783e9449ef57d2f8998ef6b3 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 161 7.3E-19 T 14-10-2018 IPR016188 PurM-like, N-terminal domain C3497_00630 e27061c2783e9449ef57d2f8998ef6b3 348 SUPERFAMILY SSF55326 18 165 4.04E-36 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_00630 e27061c2783e9449ef57d2f8998ef6b3 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 325 7.7E-32 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C3497_00630 e27061c2783e9449ef57d2f8998ef6b3 348 PIRSF PIRSF005644 11 348 6.5E-123 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE C3497_00630 e27061c2783e9449ef57d2f8998ef6b3 348 Gene3D G3DSA:3.90.650.10 171 348 3.3E-58 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_00630 e27061c2783e9449ef57d2f8998ef6b3 348 SUPERFAMILY SSF56042 171 343 1.94E-48 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3497_00630 e27061c2783e9449ef57d2f8998ef6b3 348 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 15 348 1.9E-137 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE C3497_00630 e27061c2783e9449ef57d2f8998ef6b3 348 Gene3D G3DSA:3.30.1330.10 17 165 1.1E-52 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 130 2.9E-27 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 Gene3D G3DSA:1.10.274.10 24 150 8.3E-70 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 452 470 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 SUPERFAMILY SSF47831 28 147 1.7E-26 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 PIRSF PIRSF000732 1 579 8.0E-205 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 Pfam PF00391 PEP-utilising enzyme, mobile domain 161 231 1.0E-23 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 258 545 2.2E-103 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 190 201 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 Gene3D G3DSA:3.50.30.10 7 239 8.3E-70 T 14-10-2018 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 570 8.3E-158 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 Gene3D G3DSA:3.20.20.60 240 578 1.7E-113 T 14-10-2018 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 SUPERFAMILY SSF51621 256 551 1.68E-101 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 SUPERFAMILY SSF52009 129 249 4.97E-32 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 505 517 4.3E-27 T 14-10-2018 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 452 467 4.3E-27 T 14-10-2018 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 299 318 4.3E-27 T 14-10-2018 C3497_14300 4bfbe3a651e4204bdc1884c0aa7ad706 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 469 484 4.3E-27 T 14-10-2018 C3497_11110 d3a192b85fabee07d895a467ed162ff3 344 SUPERFAMILY SSF52540 3 285 4.94E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11110 d3a192b85fabee07d895a467ed162ff3 344 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 26 72 4.3E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_11110 d3a192b85fabee07d895a467ed162ff3 344 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 184 281 9.8E-18 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_11110 d3a192b85fabee07d895a467ed162ff3 344 Gene3D G3DSA:3.40.50.300 3 289 1.2E-21 T 14-10-2018 C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 SUPERFAMILY SSF52540 171 445 2.31E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 SMART SM00487 257 451 1.1E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 Pfam PF00271 Helicase conserved C-terminal domain 472 579 1.1E-15 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 SUPERFAMILY SSF52540 380 590 1.77E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 Gene3D G3DSA:3.40.50.300 203 441 4.8E-82 T 14-10-2018 C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 Gene3D G3DSA:2.40.50.140 43 134 9.0E-7 T 14-10-2018 C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 Pfam PF00270 DEAD/DEAH box helicase 285 425 9.1E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 Pfam PF17191 RecG wedge domain 17 164 3.3E-13 T 14-10-2018 IPR033454 RecG, wedge domain C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 SMART SM00490 497 580 3.0E-20 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 SUPERFAMILY SSF50249 11 166 1.54E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 Gene3D G3DSA:3.40.50.300 449 621 1.4E-52 T 14-10-2018 C3497_00265 1c26d82e16640a9e8376a2548b54b546 684 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 655 2.0E-212 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 C3497_03470 17f264a444f715d6a3d1753007a60fb5 291 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 215 1.5E-72 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 C3497_03470 17f264a444f715d6a3d1753007a60fb5 291 Gene3D G3DSA:3.40.50.300 1 290 1.1E-116 T 14-10-2018 C3497_03470 17f264a444f715d6a3d1753007a60fb5 291 ProSitePatterns PS00567 Phosphoribulokinase signature. 165 178 - T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 C3497_03470 17f264a444f715d6a3d1753007a60fb5 291 SUPERFAMILY SSF52540 4 287 4.09E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_03470 17f264a444f715d6a3d1753007a60fb5 291 PRINTS PR00478 Phosphoribulokinase family signature 127 145 1.1E-31 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 C3497_03470 17f264a444f715d6a3d1753007a60fb5 291 PRINTS PR00478 Phosphoribulokinase family signature 183 206 1.1E-31 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 C3497_03470 17f264a444f715d6a3d1753007a60fb5 291 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.1E-31 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 C3497_03470 17f264a444f715d6a3d1753007a60fb5 291 PRINTS PR00478 Phosphoribulokinase family signature 165 182 1.1E-31 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 C3497_12075 3c856a34561242d957dd87c57ca073df 277 Pfam PF13672 Protein phosphatase 2C 12 203 4.0E-12 T 14-10-2018 C3497_12075 3c856a34561242d957dd87c57ca073df 277 SUPERFAMILY SSF81606 7 243 1.44E-46 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_12075 3c856a34561242d957dd87c57ca073df 277 SMART SM00332 1 242 8.7E-10 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_12075 3c856a34561242d957dd87c57ca073df 277 Gene3D G3DSA:3.60.40.10 3 244 1.5E-48 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_12075 3c856a34561242d957dd87c57ca073df 277 SMART SM00331 19 244 1.4E-14 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_08070 793ccced390148fea21fdc63c7476627 670 SUPERFAMILY SSF56935 34 665 4.27E-93 T 14-10-2018 C3497_08070 793ccced390148fea21fdc63c7476627 670 Gene3D G3DSA:2.40.170.20 157 668 1.2E-75 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3497_08070 793ccced390148fea21fdc63c7476627 670 Gene3D G3DSA:2.170.130.10 35 151 1.2E-12 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_08070 793ccced390148fea21fdc63c7476627 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 144 3.5E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_08070 793ccced390148fea21fdc63c7476627 670 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 45 666 2.9E-233 T 14-10-2018 IPR010100 TonB-dependent copper receptor C3497_08070 793ccced390148fea21fdc63c7476627 670 Pfam PF00593 TonB dependent receptor 200 665 2.5E-43 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_03685 b7a228870f00b79d85077c6f1b45c35c 313 Pfam PF00174 Oxidoreductase molybdopterin binding domain 98 251 6.2E-29 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 C3497_03685 b7a228870f00b79d85077c6f1b45c35c 313 Gene3D G3DSA:3.90.420.10 58 313 3.4E-105 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 C3497_03685 b7a228870f00b79d85077c6f1b45c35c 313 SUPERFAMILY SSF56524 65 309 1.7E-90 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 C3497_03685 b7a228870f00b79d85077c6f1b45c35c 313 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 313 55.027 T 14-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 C3497_04195 a998634cd7de0d1b7dd8c52ecb506952 342 Gene3D G3DSA:3.30.450.40 105 337 1.0E-46 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_04195 a998634cd7de0d1b7dd8c52ecb506952 342 SUPERFAMILY SSF55781 73 340 9.42E-65 T 14-10-2018 C3497_04195 a998634cd7de0d1b7dd8c52ecb506952 342 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 10 74 5.8E-5 T 14-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 C3497_04195 a998634cd7de0d1b7dd8c52ecb506952 342 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 6 337 9.8E-103 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 C3497_04195 a998634cd7de0d1b7dd8c52ecb506952 342 PIRSF PIRSF005485 1 342 4.4E-114 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 C3497_04195 a998634cd7de0d1b7dd8c52ecb506952 342 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 3 331 28.493 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 C3497_04195 a998634cd7de0d1b7dd8c52ecb506952 342 Pfam PF01628 HrcA protein C terminal domain 105 324 7.1E-62 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 C3497_04195 a998634cd7de0d1b7dd8c52ecb506952 342 Gene3D G3DSA:1.10.10.10 1 86 1.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_04195 a998634cd7de0d1b7dd8c52ecb506952 342 SUPERFAMILY SSF46785 4 85 6.67E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_04195 a998634cd7de0d1b7dd8c52ecb506952 342 Gene3D G3DSA:3.30.390.60 128 228 1.0E-46 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily C3497_13670 f2507bbd9c3446d7f42c6fdf37747d05 312 Gene3D G3DSA:3.40.1390.20 6 131 3.0E-16 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily C3497_13670 f2507bbd9c3446d7f42c6fdf37747d05 312 Gene3D G3DSA:3.40.50.300 132 310 8.2E-65 T 14-10-2018 C3497_13670 f2507bbd9c3446d7f42c6fdf37747d05 312 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 304 1.3E-93 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 C3497_13670 f2507bbd9c3446d7f42c6fdf37747d05 312 SUPERFAMILY SSF53795 134 302 4.88E-36 T 14-10-2018 C3497_13670 f2507bbd9c3446d7f42c6fdf37747d05 312 SUPERFAMILY SSF75138 1 133 2.22E-25 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily C3497_13670 f2507bbd9c3446d7f42c6fdf37747d05 312 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 309 33.824 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 C3497_13670 f2507bbd9c3446d7f42c6fdf37747d05 312 Pfam PF02603 HPr Serine kinase N terminus 6 129 6.3E-17 T 14-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 C3497_13670 f2507bbd9c3446d7f42c6fdf37747d05 312 Pfam PF07475 HPr Serine kinase C-terminal domain 132 301 1.7E-62 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 C3497_00495 061edee1273d078adf7af0204dfa03c6 227 SUPERFAMILY SSF46785 100 178 1.22E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_00495 061edee1273d078adf7af0204dfa03c6 227 Gene3D G3DSA:1.10.10.10 101 179 8.3E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_00495 061edee1273d078adf7af0204dfa03c6 227 Hamap MF_01584 UPF0502 protein YceH [yceH]. 15 224 30.354 T 14-10-2018 IPR007432 Protein of unknown function DUF480 C3497_00495 061edee1273d078adf7af0204dfa03c6 227 Pfam PF04337 Protein of unknown function, DUF480 15 162 1.6E-57 T 14-10-2018 IPR007432 Protein of unknown function DUF480 C3497_00495 061edee1273d078adf7af0204dfa03c6 227 SUPERFAMILY SSF46785 13 93 4.17E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_00495 061edee1273d078adf7af0204dfa03c6 227 Gene3D G3DSA:1.10.10.10 2 100 3.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_01915 f4c89f679c8e4ff0f59e3469ad6a6a4b 105 Gene3D G3DSA:2.30.30.30 1 104 4.1E-37 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C3497_01915 f4c89f679c8e4ff0f59e3469ad6a6a4b 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 20.807 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01915 f4c89f679c8e4ff0f59e3469ad6a6a4b 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 2.8E-25 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01915 f4c89f679c8e4ff0f59e3469ad6a6a4b 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 102 1.1E-37 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01915 f4c89f679c8e4ff0f59e3469ad6a6a4b 105 SUPERFAMILY SSF50104 3 101 4.82E-32 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C3497_01915 f4c89f679c8e4ff0f59e3469ad6a6a4b 105 SMART SM00739 3 30 7.2E-4 T 14-10-2018 IPR005824 KOW C3497_01915 f4c89f679c8e4ff0f59e3469ad6a6a4b 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_08925 fc9cad100d322db8f0d066379d7dea90 336 Pfam PF12801 4Fe-4S binding domain 207 242 0.0088 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_08925 fc9cad100d322db8f0d066379d7dea90 336 Pfam PF12801 4Fe-4S binding domain 95 139 1.1E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_08925 fc9cad100d322db8f0d066379d7dea90 336 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 292 303 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_08925 fc9cad100d322db8f0d066379d7dea90 336 SUPERFAMILY SSF54862 106 303 3.07E-6 T 14-10-2018 C3497_13305 54cf42c08259d82c3407bdc9d9cd84f8 113 Pfam PF03899 ATP synthase I chain 3 98 8.4E-13 T 14-10-2018 IPR005598 ATP synthase protein I C3497_10735 3e9723a7b0ca1959b9bfb21257fa6fa6 476 SMART SM00155 389 416 3.8E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C3497_10735 3e9723a7b0ca1959b9bfb21257fa6fa6 476 SMART SM00155 210 237 0.0016 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C3497_10735 3e9723a7b0ca1959b9bfb21257fa6fa6 476 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 25 476 3.0E-90 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 C3497_10735 3e9723a7b0ca1959b9bfb21257fa6fa6 476 Gene3D G3DSA:3.30.870.10 301 465 9.4E-28 T 14-10-2018 C3497_10735 3e9723a7b0ca1959b9bfb21257fa6fa6 476 Pfam PF13396 Phospholipase_D-nuclease N-terminal 27 58 6.2E-8 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal C3497_10735 3e9723a7b0ca1959b9bfb21257fa6fa6 476 SUPERFAMILY SSF56024 292 462 4.93E-41 T 14-10-2018 C3497_10735 3e9723a7b0ca1959b9bfb21257fa6fa6 476 Pfam PF13091 PLD-like domain 319 442 3.9E-29 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3497_10735 3e9723a7b0ca1959b9bfb21257fa6fa6 476 Pfam PF13091 PLD-like domain 128 270 4.3E-18 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3497_10735 3e9723a7b0ca1959b9bfb21257fa6fa6 476 SUPERFAMILY SSF56024 76 307 9.94E-51 T 14-10-2018 C3497_10735 3e9723a7b0ca1959b9bfb21257fa6fa6 476 Gene3D G3DSA:3.30.870.10 104 289 2.2E-41 T 14-10-2018 C3497_02965 2a1b0f0222717c8e1b0925e4a3e721ef 251 SUPERFAMILY SSF46626 39 215 4.49E-49 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_02965 2a1b0f0222717c8e1b0925e4a3e721ef 251 Gene3D G3DSA:1.10.760.10 31 216 1.2E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_02965 2a1b0f0222717c8e1b0925e4a3e721ef 251 Pfam PF02167 Cytochrome C1 family 40 250 4.4E-19 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 132 276 9.4E-46 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 Gene3D G3DSA:3.40.50.11540 136 254 2.9E-11 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 Pfam PF13237 4Fe-4S dicluster domain 365 418 2.1E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 Pfam PF10531 SLBB domain 289 336 2.8E-13 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 SUPERFAMILY SSF142019 88 294 8.89E-57 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 Pfam PF13375 RnfC Barrel sandwich hybrid domain 7 108 5.0E-30 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 Gene3D G3DSA:1.10.1060.10 364 435 2.1E-13 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 571 176.913 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 SUPERFAMILY SSF46548 326 437 6.8E-21 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 5 437 3.5E-163 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 C3497_08350 cb9617c03c1879085667d0ca26c842c0 571 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 407 418 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_09075 b913cf0c6f43ac41dc7441dd83f52227 457 Pfam PF01926 50S ribosome-binding GTPase 6 152 1.8E-15 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_09075 b913cf0c6f43ac41dc7441dd83f52227 457 SUPERFAMILY SSF52540 4 167 3.14E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09075 b913cf0c6f43ac41dc7441dd83f52227 457 Pfam PF11981 Domain of unknown function (DUF3482) 165 439 1.6E-93 T 14-10-2018 IPR021871 Protein of unknown function DUF3482 C3497_09075 b913cf0c6f43ac41dc7441dd83f52227 457 Gene3D G3DSA:3.40.50.300 2 198 7.5E-24 T 14-10-2018 C3497_14755 4b8edb69b356d82c5cb26b4d28b24a1c 312 Gene3D G3DSA:3.40.190.10 92 290 8.8E-77 T 14-10-2018 C3497_14755 4b8edb69b356d82c5cb26b4d28b24a1c 312 SUPERFAMILY SSF46785 1 111 3.13E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_14755 4b8edb69b356d82c5cb26b4d28b24a1c 312 Gene3D G3DSA:3.40.190.10 161 267 8.8E-77 T 14-10-2018 C3497_14755 4b8edb69b356d82c5cb26b4d28b24a1c 312 SUPERFAMILY SSF53850 88 295 5.12E-41 T 14-10-2018 C3497_14755 4b8edb69b356d82c5cb26b4d28b24a1c 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14755 4b8edb69b356d82c5cb26b4d28b24a1c 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14755 4b8edb69b356d82c5cb26b4d28b24a1c 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14755 4b8edb69b356d82c5cb26b4d28b24a1c 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_14755 4b8edb69b356d82c5cb26b4d28b24a1c 312 Pfam PF03466 LysR substrate binding domain 87 294 1.8E-47 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_14755 4b8edb69b356d82c5cb26b4d28b24a1c 312 Gene3D G3DSA:1.10.10.10 1 85 1.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_00635 1707e10034ca00e801f3dd85169bf7f4 391 Gene3D G3DSA:3.40.50.11750 20 265 8.1E-103 T 14-10-2018 C3497_00635 1707e10034ca00e801f3dd85169bf7f4 391 PIRSF PIRSF005622 1 374 1.3E-152 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 C3497_00635 1707e10034ca00e801f3dd85169bf7f4 391 Gene3D G3DSA:1.10.10.2140 320 371 1.1E-24 T 14-10-2018 C3497_00635 1707e10034ca00e801f3dd85169bf7f4 391 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 372 5.9E-140 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 C3497_00635 1707e10034ca00e801f3dd85169bf7f4 391 Gene3D G3DSA:3.40.50.11740 61 306 8.1E-103 T 14-10-2018 C3497_00635 1707e10034ca00e801f3dd85169bf7f4 391 Pfam PF01924 Hydrogenase formation hypA family 12 369 2.4E-151 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 C3497_04310 aaa05d5e48028c206a8e6bfce4302f8a 351 Pfam PF03773 Predicted permease 54 348 1.2E-71 T 14-10-2018 IPR005524 Predicted permease DUF318 C3497_05460 cdcd24bcb76cb69df9d3e5caa2d98e2f 313 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 289 4.4E-105 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 C3497_05460 cdcd24bcb76cb69df9d3e5caa2d98e2f 313 Gene3D G3DSA:3.30.70.250 123 195 3.1E-95 T 14-10-2018 C3497_05460 cdcd24bcb76cb69df9d3e5caa2d98e2f 313 SUPERFAMILY SSF52151 3 308 3.92E-74 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C3497_05460 cdcd24bcb76cb69df9d3e5caa2d98e2f 313 Pfam PF00698 Acyl transferase domain 6 293 5.1E-34 T 14-10-2018 IPR014043 Acyl transferase C3497_05460 cdcd24bcb76cb69df9d3e5caa2d98e2f 313 PIRSF PIRSF000446 1 309 3.1E-109 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 C3497_05460 cdcd24bcb76cb69df9d3e5caa2d98e2f 313 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 312 5.3E-32 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain C3497_05460 cdcd24bcb76cb69df9d3e5caa2d98e2f 313 SUPERFAMILY SSF55048 126 195 3.92E-18 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding C3497_05460 cdcd24bcb76cb69df9d3e5caa2d98e2f 313 Gene3D G3DSA:3.40.366.10 4 282 3.1E-95 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 C3497_01035 99f64fb19e7283162ca73383389a2a5d 234 SUPERFAMILY SSF161098 19 219 5.23E-30 T 14-10-2018 IPR035906 MetI-like superfamily C3497_01035 99f64fb19e7283162ca73383389a2a5d 234 Gene3D G3DSA:1.10.3720.10 3 230 1.2E-24 T 14-10-2018 IPR035906 MetI-like superfamily C3497_01035 99f64fb19e7283162ca73383389a2a5d 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 228 3.7E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 SUPERFAMILY SSF48256 5 429 7.07E-166 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 Gene3D G3DSA:1.10.580.10 58 413 1.1E-143 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 PRINTS PR00143 Citrate synthase signature 297 317 2.3E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 PRINTS PR00143 Citrate synthase signature 381 395 2.3E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 PRINTS PR00143 Citrate synthase signature 361 377 2.3E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 PRINTS PR00143 Citrate synthase signature 166 179 2.3E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 PRINTS PR00143 Citrate synthase signature 220 235 2.3E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 PRINTS PR00143 Citrate synthase signature 242 270 2.3E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 Gene3D G3DSA:2.20.28.60 2 51 1.7E-21 T 14-10-2018 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 424 1.9E-236 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 Gene3D G3DSA:1.10.230.10 269 378 1.1E-143 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 PIRSF PIRSF001369 38 431 1.6E-163 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type C3497_07065 1ee6ff461eecec7bd771808dd03a0279 431 Pfam PF00285 Citrate synthase, C-terminal domain 49 413 5.2E-132 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3497_11705 56672c5c536c9654770580440c6f1672 501 Gene3D G3DSA:2.40.30.170 250 324 2.5E-34 T 14-10-2018 C3497_11705 56672c5c536c9654770580440c6f1672 501 Gene3D G3DSA:1.10.287.470 186 201 2.5E-34 T 14-10-2018 C3497_11705 56672c5c536c9654770580440c6f1672 501 Pfam PF11604 Copper binding periplasmic protein CusF 422 489 2.9E-20 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF C3497_11705 56672c5c536c9654770580440c6f1672 501 Gene3D G3DSA:2.40.50.320 418 497 1.3E-19 T 14-10-2018 C3497_11705 56672c5c536c9654770580440c6f1672 501 SUPERFAMILY SSF111369 123 327 4.18E-17 T 14-10-2018 C3497_11705 56672c5c536c9654770580440c6f1672 501 Gene3D G3DSA:1.10.287.470 161 174 5.3E-12 T 14-10-2018 C3497_11705 56672c5c536c9654770580440c6f1672 501 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 99 396 9.1E-41 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_11705 56672c5c536c9654770580440c6f1672 501 Gene3D G3DSA:2.40.30.170 112 125 5.3E-12 T 14-10-2018 C3497_11705 56672c5c536c9654770580440c6f1672 501 Gene3D G3DSA:2.40.50.100 202 249 2.5E-34 T 14-10-2018 C3497_11705 56672c5c536c9654770580440c6f1672 501 Gene3D G3DSA:2.40.420.20 327 417 4.2E-25 T 14-10-2018 C3497_11705 56672c5c536c9654770580440c6f1672 501 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 322 3.6E-73 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3497_11705 56672c5c536c9654770580440c6f1672 501 Gene3D G3DSA:2.40.420.20 100 111 5.3E-12 T 14-10-2018 C3497_11705 56672c5c536c9654770580440c6f1672 501 Gene3D G3DSA:2.40.50.100 126 160 5.3E-12 T 14-10-2018 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 SUPERFAMILY SSF56059 1 381 2.35E-112 T 14-10-2018 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 Gene3D G3DSA:3.50.30.10 354 464 3.2E-41 T 14-10-2018 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 411 422 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 691 709 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 339 1.1E-119 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 Gene3D G3DSA:3.30.1490.20 1 190 1.3E-72 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 Gene3D G3DSA:3.30.470.20 191 353 3.0E-61 T 14-10-2018 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 Gene3D G3DSA:3.20.20.60 475 786 5.4E-103 T 14-10-2018 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 479 779 4.8E-63 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 SUPERFAMILY SSF51621 458 784 6.81E-99 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 SUPERFAMILY SSF52009 345 464 4.71E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 784 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 Pfam PF00391 PEP-utilising enzyme, mobile domain 381 452 1.8E-26 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 C3497_05180 df06f9339a0ee4393429ee1e6d07326f 788 PIRSF PIRSF000854 1 788 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 Gene3D G3DSA:3.40.120.10 3 159 4.7E-47 T 14-10-2018 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 259 2.8E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 Gene3D G3DSA:3.40.120.10 179 365 3.5E-60 T 14-10-2018 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 448 47.522 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 1.3E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 179 198 1.3E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 1.3E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 370 5.8E-31 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 SUPERFAMILY SSF53738 2 186 2.16E-47 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 446 5.0E-184 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 SUPERFAMILY SSF53738 161 261 2.24E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 139 4.4E-42 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 Gene3D G3DSA:3.40.120.10 262 343 3.5E-60 T 14-10-2018 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 SUPERFAMILY SSF53738 263 370 1.22E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 SUPERFAMILY SSF55957 362 449 6.15E-23 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 445 1.6E-16 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_04270 ac7f19dfb3dc4a1f9c55559c2c7dc571 450 Gene3D G3DSA:3.30.310.50 374 449 5.2E-23 T 14-10-2018 C3497_10140 a7b4cd472934b32c5813dec6ec979433 171 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10140 a7b4cd472934b32c5813dec6ec979433 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 43 5.6E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10140 a7b4cd472934b32c5813dec6ec979433 171 Pfam PF12019 Type II transport protein GspH 57 154 2.7E-4 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 C3497_10140 a7b4cd472934b32c5813dec6ec979433 171 SUPERFAMILY SSF54523 23 144 4.63E-13 T 14-10-2018 C3497_10140 a7b4cd472934b32c5813dec6ec979433 171 Pfam PF07963 Prokaryotic N-terminal methylation motif 20 42 2.5E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10140 a7b4cd472934b32c5813dec6ec979433 171 Gene3D G3DSA:3.30.700.10 23 156 7.8E-8 T 14-10-2018 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 Gene3D G3DSA:3.30.572.10 1 264 1.4E-132 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 Pfam PF00303 Thymidylate synthase 3 264 5.3E-126 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.7E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.7E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.7E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.7E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.7E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.464 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 5.9E-97 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 1.7E-42 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_09910 dca2ed11f8fef3c6becb47f9022b13cd 264 SUPERFAMILY SSF55831 1 264 4.97E-130 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3497_04795 aa759a027a36d729ea39a474a21272d2 360 Gene3D G3DSA:3.30.465.10 55 174 8.4E-35 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3497_04795 aa759a027a36d729ea39a474a21272d2 360 SUPERFAMILY SSF55103 181 358 1.8E-22 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C3497_04795 aa759a027a36d729ea39a474a21272d2 360 Pfam PF01565 FAD binding domain 13 137 1.0E-19 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C3497_04795 aa759a027a36d729ea39a474a21272d2 360 Gene3D G3DSA:1.10.45.10 329 356 1.3E-5 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 C3497_04795 aa759a027a36d729ea39a474a21272d2 360 Pfam PF02913 FAD linked oxidases, C-terminal domain 334 355 1.2E-4 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C3497_04795 aa759a027a36d729ea39a474a21272d2 360 SUPERFAMILY SSF56176 11 175 2.8E-31 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3497_00790 44a200a8b1607695dcc300e634303d91 274 Gene3D G3DSA:1.10.12.10 217 274 1.7E-21 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal C3497_00790 44a200a8b1607695dcc300e634303d91 274 Gene3D G3DSA:3.90.226.10 5 215 1.4E-72 T 14-10-2018 C3497_00790 44a200a8b1607695dcc300e634303d91 274 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 273 3.4E-62 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3497_00790 44a200a8b1607695dcc300e634303d91 274 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 115 135 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 C3497_00790 44a200a8b1607695dcc300e634303d91 274 SUPERFAMILY SSF52096 8 273 3.73E-83 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_00790 44a200a8b1607695dcc300e634303d91 274 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 16 274 6.5E-119 T 14-10-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 1.1E-25 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 1.7E-22 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 SUPERFAMILY SSF53659 429 753 2.26E-83 T 14-10-2018 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 750 2.9E-88 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 PIRSF PIRSF036684 1 757 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 SUPERFAMILY SSF51735 163 443 1.31E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 Gene3D G3DSA:3.40.50.10750 572 726 3.0E-85 T 14-10-2018 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 SMART SM00919 163 400 1.2E-135 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 Gene3D G3DSA:3.40.50.720 161 444 2.1E-81 T 14-10-2018 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 Gene3D G3DSA:3.40.50.10950 445 750 3.0E-85 T 14-10-2018 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 SMART SM01274 18 151 1.1E-75 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 Gene3D G3DSA:3.40.50.10380 2 160 7.0E-66 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 C3497_12705 252d99f243d1c0f53cfb42ab8f904daf 757 SUPERFAMILY SSF53223 10 161 4.32E-51 T 14-10-2018 C3497_08680 5810414987ff5eae7dfa48db455eccc4 389 Pfam PF00487 Fatty acid desaturase 10 222 2.3E-13 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 C3497_08680 5810414987ff5eae7dfa48db455eccc4 389 Pfam PF01610 Transposase 269 387 6.4E-8 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C3497_02595 18d2d6c32f571e00724da1a067a555ba 458 SUPERFAMILY SSF63411 28 237 5.13E-61 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3497_02595 18d2d6c32f571e00724da1a067a555ba 458 Gene3D G3DSA:3.30.830.10 24 246 3.1E-83 T 14-10-2018 C3497_02595 18d2d6c32f571e00724da1a067a555ba 458 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 C3497_02595 18d2d6c32f571e00724da1a067a555ba 458 Pfam PF05193 Peptidase M16 inactive domain 196 375 5.6E-28 T 14-10-2018 IPR007863 Peptidase M16, C-terminal C3497_02595 18d2d6c32f571e00724da1a067a555ba 458 Gene3D G3DSA:3.30.830.10 248 443 1.2E-53 T 14-10-2018 C3497_02595 18d2d6c32f571e00724da1a067a555ba 458 SUPERFAMILY SSF63411 256 441 7.5E-34 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3497_02595 18d2d6c32f571e00724da1a067a555ba 458 Pfam PF00675 Insulinase (Peptidase family M16) 40 185 1.7E-27 T 14-10-2018 IPR011765 Peptidase M16, N-terminal C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 ProSitePatterns PS00057 Ribosomal protein S18 signature. 34 57 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 34 83 2.0E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 SUPERFAMILY SSF46911 14 84 4.58E-27 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 15 86 20.525 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 PRINTS PR00974 Ribosomal protein S18 family signature 51 58 3.9E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 PRINTS PR00974 Ribosomal protein S18 family signature 41 51 3.9E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 PRINTS PR00974 Ribosomal protein S18 family signature 59 73 3.9E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 PRINTS PR00974 Ribosomal protein S18 family signature 73 83 3.9E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 TIGRFAM TIGR00165 S18: ribosomal protein bS18 18 85 2.5E-34 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 Gene3D G3DSA:4.10.640.10 3 87 7.5E-27 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12600 4fa320681fa04401cb66aa567d2ca47f 88 Pfam PF01084 Ribosomal protein S18 30 81 2.6E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01205 8d9100528e2f53d9ee9011a235020a95 166 Gene3D G3DSA:3.30.1330.200 5 161 9.1E-49 T 14-10-2018 IPR038592 CheD-like superfamily C3497_01205 8d9100528e2f53d9ee9011a235020a95 166 Pfam PF03975 CheD chemotactic sensory transduction 48 152 1.6E-27 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 C3497_01205 8d9100528e2f53d9ee9011a235020a95 166 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 2 158 25.058 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 C3497_01205 8d9100528e2f53d9ee9011a235020a95 166 SUPERFAMILY SSF64438 5 157 3.48E-45 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic C3497_08960 f7a953f0bc94e675eef0273a23c87e8b 336 Gene3D G3DSA:3.30.70.3460 65 149 2.2E-18 T 14-10-2018 C3497_08960 f7a953f0bc94e675eef0273a23c87e8b 336 Gene3D G3DSA:3.30.70.3460 213 335 1.8E-35 T 14-10-2018 C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 Hamap MF_00900 GTPase HflX [hflX]. 27 371 46.261 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 266 284 4.7E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.7E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 Pfam PF13167 GTP-binding GTPase N-terminal 24 112 3.9E-30 T 14-10-2018 IPR025121 GTPase HflX, N-terminal C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 357 5.9E-148 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 SUPERFAMILY SSF52540 198 358 2.35E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 Gene3D G3DSA:3.40.50.11060 18 138 1.2E-37 T 14-10-2018 C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 Gene3D G3DSA:3.40.50.300 199 362 1.6E-40 T 14-10-2018 C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 PIRSF PIRSF006809 3 367 1.5E-137 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 Pfam PF01926 50S ribosome-binding GTPase 200 317 7.0E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_02815 a59a263aae4b3c362b31c1e7f7955097 384 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 5.8E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain C3497_13430 d040599e49c21e7894b15bacdc94245a 203 Pfam PF01479 S4 domain 92 139 4.0E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_13430 d040599e49c21e7894b15bacdc94245a 203 SMART SM01390 3 91 8.3E-35 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 C3497_13430 d040599e49c21e7894b15bacdc94245a 203 Gene3D G3DSA:3.10.290.10 91 186 2.7E-64 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3497_13430 d040599e49c21e7894b15bacdc94245a 203 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 1.9E-22 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 C3497_13430 d040599e49c21e7894b15bacdc94245a 203 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_13430 d040599e49c21e7894b15bacdc94245a 203 SUPERFAMILY SSF55174 3 199 7.07E-60 T 14-10-2018 C3497_13430 d040599e49c21e7894b15bacdc94245a 203 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 31.578 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3497_13430 d040599e49c21e7894b15bacdc94245a 203 SMART SM00363 92 153 2.7E-17 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_13430 d040599e49c21e7894b15bacdc94245a 203 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 8.0E-69 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3497_13430 d040599e49c21e7894b15bacdc94245a 203 Gene3D G3DSA:1.10.1050.10 6 200 2.7E-64 T 14-10-2018 C3497_02615 3f941ab7196c2238e12f99e91361ba91 187 SUPERFAMILY SSF52833 2 186 5.47E-53 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_02615 3f941ab7196c2238e12f99e91361ba91 187 Pfam PF00578 AhpC/TSA family 5 133 5.3E-30 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3497_02615 3f941ab7196c2238e12f99e91361ba91 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 5.6E-7 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3497_02615 3f941ab7196c2238e12f99e91361ba91 187 PIRSF PIRSF000239 1 187 5.2E-45 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3497_02615 3f941ab7196c2238e12f99e91361ba91 187 Gene3D G3DSA:3.40.30.10 1 186 1.1E-57 T 14-10-2018 C3497_02615 3f941ab7196c2238e12f99e91361ba91 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 3.4E-97 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 Gene3D G3DSA:3.40.50.300 119 299 6.4E-64 T 14-10-2018 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 Pfam PF00072 Response regulator receiver domain 7 116 4.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 Pfam PF00158 Sigma-54 interaction domain 130 295 6.0E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 Gene3D G3DSA:1.10.10.60 405 472 1.9E-12 T 14-10-2018 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 SUPERFAMILY SSF52540 130 370 1.42E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 SMART SM00448 5 116 4.2E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 SUPERFAMILY SSF46689 341 469 5.38E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 Pfam PF02954 Bacterial regulatory protein, Fis family 429 469 8.5E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 Gene3D G3DSA:1.10.8.60 300 374 7.7E-22 T 14-10-2018 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 SMART SM00382 149 293 2.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 SUPERFAMILY SSF52172 4 174 3.27E-41 T 14-10-2018 IPR011006 CheY-like superfamily C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 Gene3D G3DSA:3.40.50.2300 6 118 2.3E-32 T 14-10-2018 C3497_09230 ac515b83e6c6c83c3f2dd5ecaa92bf44 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 153 166 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3497_12200 71dc18f56f928207abdea2319cd350b3 137 Hamap MF_00048 UPF0102 protein YraN [yraN]. 20 132 21.964 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 C3497_12200 71dc18f56f928207abdea2319cd350b3 137 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 20 135 3.5E-31 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 C3497_12200 71dc18f56f928207abdea2319cd350b3 137 Pfam PF02021 Uncharacterised protein family UPF0102 27 118 1.1E-24 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 C3497_12200 71dc18f56f928207abdea2319cd350b3 137 SUPERFAMILY SSF52980 22 127 2.57E-19 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3497_12200 71dc18f56f928207abdea2319cd350b3 137 Gene3D G3DSA:3.40.1350.10 26 137 1.8E-31 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 C3497_02710 aa43839dea656b3f2116149605ba460f 158 Gene3D G3DSA:3.30.70.920 55 138 4.7E-24 T 14-10-2018 C3497_02710 aa43839dea656b3f2116149605ba460f 158 SMART SM00344 1 110 4.1E-49 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 C3497_02710 aa43839dea656b3f2116149605ba460f 158 Pfam PF01037 Lrp/AsnC ligand binding domain 76 140 2.6E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain C3497_02710 aa43839dea656b3f2116149605ba460f 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site C3497_02710 aa43839dea656b3f2116149605ba460f 158 SUPERFAMILY SSF46785 1 60 2.77E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_02710 aa43839dea656b3f2116149605ba460f 158 SUPERFAMILY SSF54909 64 149 2.15E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3497_02710 aa43839dea656b3f2116149605ba460f 158 Gene3D G3DSA:1.10.10.10 1 54 4.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_02710 aa43839dea656b3f2116149605ba460f 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 6.5E-19 T 14-10-2018 C3497_02710 aa43839dea656b3f2116149605ba460f 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.1E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_02710 aa43839dea656b3f2116149605ba460f 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.1E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_02710 aa43839dea656b3f2116149605ba460f 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.1E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_00930 844cc887ea6d6b769e9866536d92e35e 171 SUPERFAMILY SSF55718 59 151 1.6E-15 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily C3497_00930 844cc887ea6d6b769e9866536d92e35e 171 Pfam PF02036 SCP-2 sterol transfer family 59 145 8.9E-13 T 14-10-2018 IPR003033 SCP2 sterol-binding domain C3497_13180 51e0d54c709d545b01d818d3edf9dcad 409 SMART SM00729 32 249 2.1E-50 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3497_13180 51e0d54c709d545b01d818d3edf9dcad 409 SUPERFAMILY SSF102114 29 405 1.31E-108 T 14-10-2018 C3497_13180 51e0d54c709d545b01d818d3edf9dcad 409 Gene3D G3DSA:3.80.30.20 13 329 1.4E-97 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C3497_13180 51e0d54c709d545b01d818d3edf9dcad 409 Pfam PF06969 HemN C-terminal domain 332 394 5.9E-11 T 14-10-2018 IPR010723 HemN, C-terminal C3497_13180 51e0d54c709d545b01d818d3edf9dcad 409 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 34 368 6.4E-104 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 C3497_13180 51e0d54c709d545b01d818d3edf9dcad 409 Pfam PF04055 Radical SAM superfamily 37 200 1.5E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 SMART SM00086 531 573 9.9E-8 T 14-10-2018 IPR001610 PAC motif C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 SMART SM00086 411 450 36.0 T 14-10-2018 IPR001610 PAC motif C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 454 580 2.0E-21 T 14-10-2018 IPR000014 PAS domain C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 SMART SM00091 458 525 3.1E-8 T 14-10-2018 IPR000014 PAS domain C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 Pfam PF00990 Diguanylate cyclase, GGDEF domain 584 741 3.5E-47 T 14-10-2018 IPR000160 GGDEF domain C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 Gene3D G3DSA:3.30.450.20 458 580 2.0E-34 T 14-10-2018 C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 SUPERFAMILY SSF55785 446 566 4.89E-28 T 14-10-2018 IPR035965 PAS domain superfamily C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 SMART SM00267 573 745 8.4E-70 T 14-10-2018 IPR000160 GGDEF domain C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 580 744 1.4E-49 T 14-10-2018 IPR000160 GGDEF domain C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 Gene3D G3DSA:3.30.450.20 34 150 2.1E-9 T 14-10-2018 C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 Gene3D G3DSA:3.30.70.270 581 746 6.4E-61 T 14-10-2018 C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 Pfam PF13426 PAS domain 469 571 8.8E-18 T 14-10-2018 IPR000014 PAS domain C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 SUPERFAMILY SSF55073 589 743 4.63E-50 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_13695 57d38d0b40e5abc7cb676429ca8a93cb 749 Gene3D G3DSA:3.30.450.20 320 457 2.8E-8 T 14-10-2018 C3497_06860 a6b59bc6885734d23f9446e5b6a0d1c6 177 SMART SM00271 7 72 0.0057 T 14-10-2018 IPR001623 DnaJ domain C3497_06860 a6b59bc6885734d23f9446e5b6a0d1c6 177 SUPERFAMILY SSF47144 84 177 6.02E-24 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_06860 a6b59bc6885734d23f9446e5b6a0d1c6 177 Pfam PF07743 HSCB C-terminal oligomerisation domain 93 169 8.3E-20 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_06860 a6b59bc6885734d23f9446e5b6a0d1c6 177 Gene3D G3DSA:1.20.1280.20 86 177 6.2E-22 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_06860 a6b59bc6885734d23f9446e5b6a0d1c6 177 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 19 173 4.5E-32 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_06860 a6b59bc6885734d23f9446e5b6a0d1c6 177 SUPERFAMILY SSF46565 8 80 1.18E-15 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C3497_06860 a6b59bc6885734d23f9446e5b6a0d1c6 177 Gene3D G3DSA:1.10.287.110 7 85 9.5E-21 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C3497_06860 a6b59bc6885734d23f9446e5b6a0d1c6 177 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 7 176 24.047 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3497_13125 db7206b01eed3b7985a2452b2b19a6c1 230 Pfam PF00027 Cyclic nucleotide-binding domain 38 121 2.4E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_13125 db7206b01eed3b7985a2452b2b19a6c1 230 Gene3D G3DSA:1.10.10.10 150 227 2.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_13125 db7206b01eed3b7985a2452b2b19a6c1 230 SMART SM00100 18 136 2.7E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_13125 db7206b01eed3b7985a2452b2b19a6c1 230 SMART SM00419 169 220 2.0E-7 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_13125 db7206b01eed3b7985a2452b2b19a6c1 230 SUPERFAMILY SSF51206 12 147 3.54E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C3497_13125 db7206b01eed3b7985a2452b2b19a6c1 230 Pfam PF13545 Crp-like helix-turn-helix domain 156 226 3.0E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_13125 db7206b01eed3b7985a2452b2b19a6c1 230 Gene3D G3DSA:2.60.120.10 7 149 3.4E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_13125 db7206b01eed3b7985a2452b2b19a6c1 230 SUPERFAMILY SSF46785 155 228 4.18E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_14780 e3273c7c7343b6aa14fcea164204af85 379 Gene3D G3DSA:3.40.50.2300 149 371 1.5E-91 T 14-10-2018 C3497_14780 e3273c7c7343b6aa14fcea164204af85 379 Pfam PF13458 Periplasmic binding protein 29 372 4.3E-59 T 14-10-2018 IPR028081 Leucine-binding protein domain C3497_14780 e3273c7c7343b6aa14fcea164204af85 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 7.7E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_14780 e3273c7c7343b6aa14fcea164204af85 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 7.7E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_14780 e3273c7c7343b6aa14fcea164204af85 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 7.7E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_14780 e3273c7c7343b6aa14fcea164204af85 379 Gene3D G3DSA:3.40.50.2300 30 367 1.5E-91 T 14-10-2018 C3497_14780 e3273c7c7343b6aa14fcea164204af85 379 SUPERFAMILY SSF53822 29 378 1.04E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_04500 6c6c7d2373a6989dfcff793dcc3631d3 176 Gene3D G3DSA:3.40.50.1450 7 154 1.9E-28 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily C3497_04500 6c6c7d2373a6989dfcff793dcc3631d3 176 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 9 145 3.8E-23 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C3497_04500 6c6c7d2373a6989dfcff793dcc3631d3 176 SUPERFAMILY SSF53163 7 148 1.57E-26 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily C3497_08825 5182212c6f4f06500a485e7224e186d0 729 Gene3D G3DSA:3.30.450.20 129 283 2.4E-7 T 14-10-2018 C3497_08825 5182212c6f4f06500a485e7224e186d0 729 SMART SM00479 538 706 3.1E-50 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3497_08825 5182212c6f4f06500a485e7224e186d0 729 Pfam PF00929 Exonuclease 541 697 2.4E-36 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3497_08825 5182212c6f4f06500a485e7224e186d0 729 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 534 700 3.0E-32 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_08825 5182212c6f4f06500a485e7224e186d0 729 Gene3D G3DSA:3.30.420.10 532 702 4.6E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_08825 5182212c6f4f06500a485e7224e186d0 729 SUPERFAMILY SSF53098 534 714 3.62E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_10240 7037a438f0e37b5a8421ecaec1061b86 131 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 6.5E-66 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 C3497_10240 7037a438f0e37b5a8421ecaec1061b86 131 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 C3497_10240 7037a438f0e37b5a8421ecaec1061b86 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 5.1E-25 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C3497_10240 7037a438f0e37b5a8421ecaec1061b86 131 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 C3497_10240 7037a438f0e37b5a8421ecaec1061b86 131 SUPERFAMILY SSF54593 1 128 1.33E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3497_10240 7037a438f0e37b5a8421ecaec1061b86 131 Gene3D G3DSA:3.10.180.10 1 130 2.6E-50 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3497_01325 cc5fe601970840660f42ad9ea2381a4b 277 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C3497_01325 cc5fe601970840660f42ad9ea2381a4b 277 Gene3D G3DSA:3.10.310.10 121 269 1.6E-103 T 14-10-2018 C3497_01325 cc5fe601970840660f42ad9ea2381a4b 277 SUPERFAMILY SSF54506 2 274 2.05E-56 T 14-10-2018 C3497_01325 cc5fe601970840660f42ad9ea2381a4b 277 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 40.003 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C3497_01325 cc5fe601970840660f42ad9ea2381a4b 277 Pfam PF01678 Diaminopimelate epimerase 154 268 3.9E-28 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C3497_01325 cc5fe601970840660f42ad9ea2381a4b 277 Pfam PF01678 Diaminopimelate epimerase 5 124 7.1E-34 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C3497_01325 cc5fe601970840660f42ad9ea2381a4b 277 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 275 3.9E-93 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C3497_01325 cc5fe601970840660f42ad9ea2381a4b 277 Gene3D G3DSA:3.10.310.10 5 272 1.6E-103 T 14-10-2018 C3497_04220 8f0a1594691e275a9e58c62b7b9607dc 268 Gene3D G3DSA:3.40.50.720 5 264 1.1E-97 T 14-10-2018 C3497_04220 8f0a1594691e275a9e58c62b7b9607dc 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 126 1.6E-37 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_04220 8f0a1594691e275a9e58c62b7b9607dc 268 SUPERFAMILY SSF51735 4 267 1.72E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_04220 8f0a1594691e275a9e58c62b7b9607dc 268 SUPERFAMILY SSF55347 128 237 1.79E-35 T 14-10-2018 C3497_04220 8f0a1594691e275a9e58c62b7b9607dc 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 266 6.7E-96 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_04220 8f0a1594691e275a9e58c62b7b9607dc 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_04220 8f0a1594691e275a9e58c62b7b9607dc 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 266 34.384 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_04220 8f0a1594691e275a9e58c62b7b9607dc 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 9.2E-41 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_04220 8f0a1594691e275a9e58c62b7b9607dc 268 PIRSF PIRSF000161 2 268 8.7E-83 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3497_04220 8f0a1594691e275a9e58c62b7b9607dc 268 Gene3D G3DSA:3.30.360.10 128 235 1.1E-97 T 14-10-2018 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SMART SM00091 101 167 0.092 T 14-10-2018 IPR000014 PAS domain C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SMART SM00091 223 291 5.1 T 14-10-2018 IPR000014 PAS domain C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SMART SM00091 352 418 1.3E-7 T 14-10-2018 IPR000014 PAS domain C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SMART SM00388 494 562 5.7E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SMART SM00387 603 716 1.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 220 347 3.5E-9 T 14-10-2018 IPR000014 PAS domain C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 467 8.9E-16 T 14-10-2018 IPR000014 PAS domain C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 102 218 8.4E-8 T 14-10-2018 IPR000014 PAS domain C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Pfam PF08447 PAS fold 246 333 3.5E-17 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Pfam PF08448 PAS fold 107 213 1.7E-9 T 14-10-2018 IPR013656 PAS fold-4 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 694 4.0E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 700 713 4.0E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 657 4.0E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SUPERFAMILY SSF55874 561 716 7.86E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SUPERFAMILY SSF55785 337 461 1.59E-23 T 14-10-2018 IPR035965 PAS domain superfamily C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SUPERFAMILY SSF55785 231 343 5.41E-20 T 14-10-2018 IPR035965 PAS domain superfamily C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Gene3D G3DSA:3.30.450.20 98 222 6.7E-18 T 14-10-2018 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Gene3D G3DSA:2.10.70.100 295 340 1.2E-15 T 14-10-2018 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SMART SM00086 423 463 9.4 T 14-10-2018 IPR001610 PAC motif C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SMART SM00086 170 211 7.1 T 14-10-2018 IPR001610 PAC motif C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SMART SM00086 298 340 2.0E-6 T 14-10-2018 IPR001610 PAC motif C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Pfam PF00512 His Kinase A (phospho-acceptor) domain 496 559 3.0E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SUPERFAMILY SSF55785 102 209 5.8E-14 T 14-10-2018 IPR035965 PAS domain superfamily C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Pfam PF00989 PAS fold 354 460 7.8E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Gene3D G3DSA:3.30.565.10 565 722 7.7E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 604 712 2.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Gene3D G3DSA:3.30.450.20 223 292 1.1E-15 T 14-10-2018 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Gene3D G3DSA:3.30.450.20 341 459 5.6E-23 T 14-10-2018 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 SUPERFAMILY SSF47384 480 562 3.73E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_06055 7feb63ead04917f286b147dd9ffb9889 729 Gene3D G3DSA:1.10.287.130 460 560 5.6E-16 T 14-10-2018 C3497_06355 81f1c14d9e011fee205543a067ea6669 320 Pfam PF01841 Transglutaminase-like superfamily 156 256 6.3E-24 T 14-10-2018 IPR002931 Transglutaminase-like C3497_06355 81f1c14d9e011fee205543a067ea6669 320 Gene3D G3DSA:3.10.620.30 109 289 3.7E-50 T 14-10-2018 C3497_06355 81f1c14d9e011fee205543a067ea6669 320 SUPERFAMILY SSF54001 79 283 2.06E-46 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily C3497_06355 81f1c14d9e011fee205543a067ea6669 320 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 11 90 1.5E-22 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal C3497_06355 81f1c14d9e011fee205543a067ea6669 320 SMART SM00460 188 258 1.3E-23 T 14-10-2018 IPR002931 Transglutaminase-like C3497_12130 129ad3f717203339d8e1566bde9c86c6 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 141 7.5E-32 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12130 129ad3f717203339d8e1566bde9c86c6 355 SUPERFAMILY SSF53756 3 351 3.35E-120 T 14-10-2018 C3497_12130 129ad3f717203339d8e1566bde9c86c6 355 Gene3D G3DSA:3.40.50.2000 5 340 1.0E-112 T 14-10-2018 C3497_12130 129ad3f717203339d8e1566bde9c86c6 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 181 324 2.0E-33 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 C3497_12130 129ad3f717203339d8e1566bde9c86c6 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 345 3.4E-101 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12130 129ad3f717203339d8e1566bde9c86c6 355 Gene3D G3DSA:3.40.50.2000 158 335 1.0E-112 T 14-10-2018 C3497_12130 129ad3f717203339d8e1566bde9c86c6 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 351 35.585 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12125 f55b99796589ccf42610d6335eb88316 471 Gene3D G3DSA:3.40.1190.10 94 309 1.3E-79 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_12125 f55b99796589ccf42610d6335eb88316 471 SUPERFAMILY SSF51984 6 92 3.14E-30 T 14-10-2018 C3497_12125 f55b99796589ccf42610d6335eb88316 471 Pfam PF01225 Mur ligase family, catalytic domain 7 105 3.2E-28 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C3497_12125 f55b99796589ccf42610d6335eb88316 471 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 460 5.0E-167 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_12125 f55b99796589ccf42610d6335eb88316 471 SUPERFAMILY SSF53244 311 461 6.41E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_12125 f55b99796589ccf42610d6335eb88316 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 408 1.6E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C3497_12125 f55b99796589ccf42610d6335eb88316 471 Gene3D G3DSA:3.40.50.720 6 92 1.1E-32 T 14-10-2018 C3497_12125 f55b99796589ccf42610d6335eb88316 471 SUPERFAMILY SSF53623 91 310 1.72E-71 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_12125 f55b99796589ccf42610d6335eb88316 471 Pfam PF08245 Mur ligase middle domain 110 292 7.6E-30 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3497_12125 f55b99796589ccf42610d6335eb88316 471 Gene3D G3DSA:3.90.190.20 310 469 3.3E-44 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_12125 f55b99796589ccf42610d6335eb88316 471 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 470 43.076 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_10395 fe0599f695e189bc323d64b6a5a3cb77 414 Pfam PF00535 Glycosyl transferase family 2 20 132 2.4E-28 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3497_10395 fe0599f695e189bc323d64b6a5a3cb77 414 SUPERFAMILY SSF53448 10 252 6.83E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_10395 fe0599f695e189bc323d64b6a5a3cb77 414 Gene3D G3DSA:3.90.550.10 1 249 1.4E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_04965 5da12b954db1ff666f9dff6e52f2aff3 281 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 15 277 1.8E-95 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 C3497_04965 5da12b954db1ff666f9dff6e52f2aff3 281 SUPERFAMILY SSF54675 4 111 1.37E-31 T 14-10-2018 C3497_04965 5da12b954db1ff666f9dff6e52f2aff3 281 Gene3D G3DSA:3.20.20.70 121 268 9.5E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_04965 5da12b954db1ff666f9dff6e52f2aff3 281 Gene3D G3DSA:3.90.1170.20 9 277 9.5E-111 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 C3497_04965 5da12b954db1ff666f9dff6e52f2aff3 281 SUPERFAMILY SSF51690 113 277 1.33E-59 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 C3497_04965 5da12b954db1ff666f9dff6e52f2aff3 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 113 277 1.5E-59 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 C3497_04965 5da12b954db1ff666f9dff6e52f2aff3 281 PIRSF PIRSF006250 4 280 8.5E-95 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 C3497_04965 5da12b954db1ff666f9dff6e52f2aff3 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 110 2.0E-26 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 C3497_05860 344f76db828282ffff6fc5dbfc6c5122 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 4.4E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_05860 344f76db828282ffff6fc5dbfc6c5122 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 4.4E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_05860 344f76db828282ffff6fc5dbfc6c5122 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 90 100 4.4E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_05860 344f76db828282ffff6fc5dbfc6c5122 373 Gene3D G3DSA:3.40.50.2300 144 282 4.4E-53 T 14-10-2018 C3497_05860 344f76db828282ffff6fc5dbfc6c5122 373 Pfam PF13458 Periplasmic binding protein 30 353 1.7E-38 T 14-10-2018 IPR028081 Leucine-binding protein domain C3497_05860 344f76db828282ffff6fc5dbfc6c5122 373 SUPERFAMILY SSF53822 30 369 2.12E-52 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_05860 344f76db828282ffff6fc5dbfc6c5122 373 Gene3D G3DSA:3.40.50.2300 33 348 4.4E-53 T 14-10-2018 C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 Pfam PF00717 Peptidase S24-like 64 146 1.8E-21 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 ProSitePatterns PS00501 Signal peptidases I serine active site. 67 74 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 ProSitePatterns PS00760 Signal peptidases I lysine active site. 124 136 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 Gene3D G3DSA:2.10.109.10 56 252 1.8E-75 T 14-10-2018 C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 ProSitePatterns PS00761 Signal peptidases I signature 3. 217 230 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 58 74 4.8E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 4.8E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 212 231 4.8E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 SUPERFAMILY SSF51306 56 258 5.06E-71 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 44 252 2.9E-50 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 Pfam PF10502 Signal peptidase, peptidase S26 210 249 2.9E-5 T 14-10-2018 IPR019533 Peptidase S26 C3497_05525 094b4fa551bd321c90a8506cccf9c6a0 262 Gene3D G3DSA:2.170.230.10 133 211 1.8E-75 T 14-10-2018 C3497_03240 8dd10fe45a1be18bd05fbc6a8df9bdc7 1309 Pfam PF13116 Protein of unknown function 536 816 1.1E-62 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 C3497_03240 8dd10fe45a1be18bd05fbc6a8df9bdc7 1309 Pfam PF13502 AsmA-like C-terminal region 1034 1275 4.5E-60 T 14-10-2018 IPR032712 AsmA-like, C-terminal C3497_03240 8dd10fe45a1be18bd05fbc6a8df9bdc7 1309 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 26 1280 1.5E-237 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 C3497_14050 65d24b4b1c34ced46f11234096c5997c 125 PIRSF PIRSF000077 1 104 1.8E-26 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3497_14050 65d24b4b1c34ced46f11234096c5997c 125 Gene3D G3DSA:3.40.30.10 1 116 7.7E-29 T 14-10-2018 C3497_14050 65d24b4b1c34ced46f11234096c5997c 125 Pfam PF00085 Thioredoxin 4 100 3.5E-24 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C3497_14050 65d24b4b1c34ced46f11234096c5997c 125 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3497_14050 65d24b4b1c34ced46f11234096c5997c 125 SUPERFAMILY SSF52833 4 100 3.53E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_14050 65d24b4b1c34ced46f11234096c5997c 125 PRINTS PR00421 Thioredoxin family signature 21 29 9.3E-7 T 14-10-2018 C3497_14050 65d24b4b1c34ced46f11234096c5997c 125 PRINTS PR00421 Thioredoxin family signature 68 79 9.3E-7 T 14-10-2018 C3497_14050 65d24b4b1c34ced46f11234096c5997c 125 PRINTS PR00421 Thioredoxin family signature 29 38 9.3E-7 T 14-10-2018 C3497_10570 c4ac104613ee163bf4be9f1230f1d09f 296 Gene3D G3DSA:1.10.1660.10 1 69 1.6E-20 T 14-10-2018 C3497_10570 c4ac104613ee163bf4be9f1230f1d09f 296 Gene3D G3DSA:3.40.50.280 170 294 2.3E-19 T 14-10-2018 C3497_10570 c4ac104613ee163bf4be9f1230f1d09f 296 Pfam PF02310 B12 binding domain 174 270 6.5E-7 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 C3497_10570 c4ac104613ee163bf4be9f1230f1d09f 296 Pfam PF13411 MerR HTH family regulatory protein 3 60 1.0E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_10570 c4ac104613ee163bf4be9f1230f1d09f 296 Gene3D G3DSA:1.10.1240.10 90 163 6.7E-8 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_10570 c4ac104613ee163bf4be9f1230f1d09f 296 SUPERFAMILY SSF52242 170 267 1.96E-14 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 C3497_10570 c4ac104613ee163bf4be9f1230f1d09f 296 SMART SM00422 1 78 6.2E-4 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_10570 c4ac104613ee163bf4be9f1230f1d09f 296 SUPERFAMILY SSF46955 1 84 1.05E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3497_04295 4afd1dcddab00fc9c94597e1e508cb86 500 SMART SM00283 158 415 9.5E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_04295 4afd1dcddab00fc9c94597e1e508cb86 500 SUPERFAMILY SSF58104 100 368 1.31E-47 T 14-10-2018 C3497_04295 4afd1dcddab00fc9c94597e1e508cb86 500 Gene3D G3DSA:1.10.287.950 117 394 1.2E-48 T 14-10-2018 C3497_04295 4afd1dcddab00fc9c94597e1e508cb86 500 Pfam PF13682 Chemoreceptor zinc-binding domain 382 451 1.4E-12 T 14-10-2018 IPR025991 Chemoreceptor zinc-binding domain C3497_04295 4afd1dcddab00fc9c94597e1e508cb86 500 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 234 366 3.5E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_05045 40eb2a1111f00f315ef3417bf5493e75 187 Gene3D G3DSA:3.30.700.10 20 152 1.4E-12 T 14-10-2018 C3497_05045 40eb2a1111f00f315ef3417bf5493e75 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 38 4.0E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_05045 40eb2a1111f00f315ef3417bf5493e75 187 Pfam PF12019 Type II transport protein GspH 54 175 2.6E-23 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 C3497_05045 40eb2a1111f00f315ef3417bf5493e75 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_05045 40eb2a1111f00f315ef3417bf5493e75 187 SUPERFAMILY SSF54523 20 116 8.63E-19 T 14-10-2018 C3497_05045 40eb2a1111f00f315ef3417bf5493e75 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 38 1.0E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_13930 e6f6945557bb36ee86f559aa1ff6f9fc 260 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 C3497_13930 e6f6945557bb36ee86f559aa1ff6f9fc 260 SUPERFAMILY SSF56219 2 256 9.29E-71 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3497_13930 e6f6945557bb36ee86f559aa1ff6f9fc 260 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 254 1.9E-67 T 14-10-2018 C3497_13930 e6f6945557bb36ee86f559aa1ff6f9fc 260 Gene3D G3DSA:3.60.10.10 1 258 5.9E-81 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3497_13930 e6f6945557bb36ee86f559aa1ff6f9fc 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 249 6.1E-17 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase C3497_13930 e6f6945557bb36ee86f559aa1ff6f9fc 260 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 256 9.3E-73 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 C3497_12160 aec78c2d55dc1dc2379e3a789144ddc2 586 Gene3D G3DSA:3.30.450.330 230 555 2.9E-115 T 14-10-2018 C3497_12160 aec78c2d55dc1dc2379e3a789144ddc2 586 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 19 566 43.726 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3497_12160 aec78c2d55dc1dc2379e3a789144ddc2 586 Pfam PF00905 Penicillin binding protein transpeptidase domain 254 550 1.0E-77 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C3497_12160 aec78c2d55dc1dc2379e3a789144ddc2 586 SUPERFAMILY SSF56519 63 228 4.45E-46 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 C3497_12160 aec78c2d55dc1dc2379e3a789144ddc2 586 Gene3D G3DSA:3.40.710.10 290 473 2.9E-115 T 14-10-2018 C3497_12160 aec78c2d55dc1dc2379e3a789144ddc2 586 Gene3D G3DSA:3.90.1310.30 60 229 2.2E-48 T 14-10-2018 C3497_12160 aec78c2d55dc1dc2379e3a789144ddc2 586 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 214 3.6E-21 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 C3497_12160 aec78c2d55dc1dc2379e3a789144ddc2 586 SUPERFAMILY SSF56601 229 559 8.14E-94 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3497_03775 f393658c5d45c1d51624453630234980 342 SUPERFAMILY SSF55347 149 310 7.33E-53 T 14-10-2018 C3497_03775 f393658c5d45c1d51624453630234980 342 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 336 44.465 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3497_03775 f393658c5d45c1d51624453630234980 342 Gene3D G3DSA:3.40.50.720 3 328 1.9E-132 T 14-10-2018 C3497_03775 f393658c5d45c1d51624453630234980 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 160 313 8.8E-21 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3497_03775 f393658c5d45c1d51624453630234980 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 140 3.1E-38 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C3497_03775 f393658c5d45c1d51624453630234980 342 SUPERFAMILY SSF51735 2 177 8.65E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_03775 f393658c5d45c1d51624453630234980 342 Gene3D G3DSA:3.30.360.10 147 310 1.9E-132 T 14-10-2018 C3497_03775 f393658c5d45c1d51624453630234980 342 SMART SM00859 3 141 3.6E-61 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C3497_03775 f393658c5d45c1d51624453630234980 342 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3497_03775 f393658c5d45c1d51624453630234980 342 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 342 1.6E-132 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3497_03335 2666af5fee10789c7fcea9eb1cd04f63 144 Gene3D G3DSA:3.90.79.10 10 134 5.0E-29 T 14-10-2018 C3497_03335 2666af5fee10789c7fcea9eb1cd04f63 144 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3497_03335 2666af5fee10789c7fcea9eb1cd04f63 144 SUPERFAMILY SSF55811 6 133 3.79E-29 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3497_03335 2666af5fee10789c7fcea9eb1cd04f63 144 Pfam PF00293 NUDIX domain 12 122 6.2E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3497_03335 2666af5fee10789c7fcea9eb1cd04f63 144 PRINTS PR00502 NUDIX hydrolase family signature 38 52 5.0E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3497_03335 2666af5fee10789c7fcea9eb1cd04f63 144 PRINTS PR00502 NUDIX hydrolase family signature 52 67 5.0E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3497_10195 039edcfcf8c1cecebfbf3546c1981c54 335 SUPERFAMILY SSF48019 211 334 9.35E-27 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 C3497_10195 039edcfcf8c1cecebfbf3546c1981c54 335 SUPERFAMILY SSF52540 3 209 1.59E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10195 039edcfcf8c1cecebfbf3546c1981c54 335 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 218 333 2.3E-12 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_10195 039edcfcf8c1cecebfbf3546c1981c54 335 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 333 3.5E-83 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 C3497_10195 039edcfcf8c1cecebfbf3546c1981c54 335 Gene3D G3DSA:3.40.50.300 1 138 2.9E-45 T 14-10-2018 C3497_10195 039edcfcf8c1cecebfbf3546c1981c54 335 Pfam PF06144 DNA polymerase III, delta subunit 21 188 5.2E-19 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 C3497_10195 039edcfcf8c1cecebfbf3546c1981c54 335 Gene3D G3DSA:1.10.8.60 142 211 2.2E-26 T 14-10-2018 C3497_10195 039edcfcf8c1cecebfbf3546c1981c54 335 Gene3D G3DSA:1.20.272.10 215 335 1.2E-31 T 14-10-2018 C3497_06950 5980b877a652675136453f37ac1374cb 236 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 190 1.6E-23 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 C3497_06950 5980b877a652675136453f37ac1374cb 236 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 16 146 5.5E-26 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 C3497_06950 5980b877a652675136453f37ac1374cb 236 SUPERFAMILY SSF103642 213 233 7.36E-8 T 14-10-2018 C3497_06950 5980b877a652675136453f37ac1374cb 236 Gene3D G3DSA:3.10.450.50 176 234 4.1E-10 T 14-10-2018 C3497_06950 5980b877a652675136453f37ac1374cb 236 SUPERFAMILY SSF101327 15 156 9.55E-17 T 14-10-2018 IPR036255 YgfB-like superfamily C3497_06950 5980b877a652675136453f37ac1374cb 236 Pfam PF02810 SEC-C motif 215 232 3.4E-10 T 14-10-2018 IPR004027 SEC-C motif C3497_09315 21975ea83f9fd240b4c77ef9a6cfb0eb 648 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 602 645 2.9E-8 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain C3497_09315 21975ea83f9fd240b4c77ef9a6cfb0eb 648 SUPERFAMILY SSF64518 129 645 6.28E-37 T 14-10-2018 C3497_09315 21975ea83f9fd240b4c77ef9a6cfb0eb 648 Pfam PF00460 Flagella basal body rod protein 7 34 5.1E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 C3497_09315 21975ea83f9fd240b4c77ef9a6cfb0eb 648 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 4.2E-28 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 C3497_09315 21975ea83f9fd240b4c77ef9a6cfb0eb 648 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 4.2E-28 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 C3497_09315 21975ea83f9fd240b4c77ef9a6cfb0eb 648 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 4.2E-28 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 C3497_09315 21975ea83f9fd240b4c77ef9a6cfb0eb 648 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 4.2E-28 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 C3497_09315 21975ea83f9fd240b4c77ef9a6cfb0eb 648 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 4.2E-28 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 C3497_09315 21975ea83f9fd240b4c77ef9a6cfb0eb 648 PRINTS PR01005 Flagellar hook-associated protein signature 356 378 4.2E-28 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 C3497_09315 21975ea83f9fd240b4c77ef9a6cfb0eb 648 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 356 6.9E-80 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 C3497_09520 e54971eadb567ac5ec5b0605dd8686d4 140 Pfam PF07027 Protein of unknown function (DUF1318) 42 140 1.5E-23 T 14-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 C3497_09520 e54971eadb567ac5ec5b0605dd8686d4 140 PIRSF PIRSF025560 9 140 6.1E-26 T 14-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 C3497_13685 062505189b33a7f5bfe45c12c221f7b0 385 Pfam PF00072 Response regulator receiver domain 99 210 3.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_13685 062505189b33a7f5bfe45c12c221f7b0 385 Gene3D G3DSA:3.30.70.270 223 385 1.5E-49 T 14-10-2018 C3497_13685 062505189b33a7f5bfe45c12c221f7b0 385 SUPERFAMILY SSF52172 96 224 9.96E-35 T 14-10-2018 IPR011006 CheY-like superfamily C3497_13685 062505189b33a7f5bfe45c12c221f7b0 385 Gene3D G3DSA:3.40.50.2300 86 222 5.8E-33 T 14-10-2018 C3497_13685 062505189b33a7f5bfe45c12c221f7b0 385 SMART SM00267 213 383 6.3E-52 T 14-10-2018 IPR000160 GGDEF domain C3497_13685 062505189b33a7f5bfe45c12c221f7b0 385 SUPERFAMILY SSF55073 229 382 3.22E-42 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_13685 062505189b33a7f5bfe45c12c221f7b0 385 SMART SM00448 97 209 8.1E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_13685 062505189b33a7f5bfe45c12c221f7b0 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 225 379 1.1E-37 T 14-10-2018 IPR000160 GGDEF domain C3497_13685 062505189b33a7f5bfe45c12c221f7b0 385 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 383 1.5E-40 T 14-10-2018 IPR000160 GGDEF domain C3497_04625 727c55e197f6614dd3128348b101fc2d 452 Gene3D G3DSA:3.40.50.2300 1 138 2.3E-23 T 14-10-2018 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 Pfam PF00072 Response regulator receiver domain 9 118 5.3E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 SUPERFAMILY SSF46689 360 448 4.93E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 429 1.4E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 449 1.4E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3497_04625 727c55e197f6614dd3128348b101fc2d 452 Gene3D G3DSA:1.10.10.60 398 451 1.3E-14 T 14-10-2018 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 SMART SM00382 167 310 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_04625 727c55e197f6614dd3128348b101fc2d 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 Gene3D G3DSA:3.40.50.300 139 317 1.4E-65 T 14-10-2018 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 Gene3D G3DSA:1.10.8.60 318 397 3.2E-23 T 14-10-2018 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 8 449 1.4E-224 T 14-10-2018 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative C3497_04625 727c55e197f6614dd3128348b101fc2d 452 Pfam PF00158 Sigma-54 interaction domain 148 313 5.3E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 SUPERFAMILY SSF52172 6 191 6.4E-31 T 14-10-2018 IPR011006 CheY-like superfamily C3497_04625 727c55e197f6614dd3128348b101fc2d 452 Pfam PF02954 Bacterial regulatory protein, Fis family 407 440 1.0E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 SMART SM00448 6 120 5.7E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_04625 727c55e197f6614dd3128348b101fc2d 452 SUPERFAMILY SSF52540 148 388 3.38E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05690 ba323e341cf782f2c83365b94024b0f0 163 Gene3D G3DSA:3.30.70.1150 83 163 1.5E-28 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal C3497_05690 ba323e341cf782f2c83365b94024b0f0 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 7.0E-26 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C3497_05690 ba323e341cf782f2c83365b94024b0f0 163 Pfam PF13710 ACT domain 13 73 1.3E-16 T 14-10-2018 C3497_05690 ba323e341cf782f2c83365b94024b0f0 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 4.0E-36 T 14-10-2018 C3497_05690 ba323e341cf782f2c83365b94024b0f0 163 SUPERFAMILY SSF55021 79 162 5.95E-26 T 14-10-2018 C3497_05690 ba323e341cf782f2c83365b94024b0f0 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 5.0E-64 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C3497_05690 ba323e341cf782f2c83365b94024b0f0 163 Gene3D G3DSA:3.30.70.260 1 78 1.6E-36 T 14-10-2018 C3497_05690 ba323e341cf782f2c83365b94024b0f0 163 SUPERFAMILY SSF55021 1 76 3.77E-23 T 14-10-2018 C3497_10485 00a9d82a4acbf99d49ed664083f15f01 314 Pfam PF13614 AAA domain 118 278 5.2E-10 T 14-10-2018 IPR025669 AAA domain C3497_10485 00a9d82a4acbf99d49ed664083f15f01 314 SUPERFAMILY SSF52540 116 295 2.48E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10485 00a9d82a4acbf99d49ed664083f15f01 314 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 114 300 8.6E-32 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 C3497_10485 00a9d82a4acbf99d49ed664083f15f01 314 TIGRFAM TIGR03018 pepcterm_TyrKin: exopolysaccharide/PEP-CTERM locus tyrosine autokinase 79 286 1.5E-84 T 14-10-2018 C3497_10485 00a9d82a4acbf99d49ed664083f15f01 314 Gene3D G3DSA:3.40.50.300 46 310 1.6E-57 T 14-10-2018 C3497_06485 a27a223c3905d6aae687aa9cba652c53 373 SUPERFAMILY SSF53187 103 352 3.97E-56 T 14-10-2018 C3497_06485 a27a223c3905d6aae687aa9cba652c53 373 SMART SM00631 81 352 7.7E-4 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 C3497_06485 a27a223c3905d6aae687aa9cba652c53 373 Gene3D G3DSA:2.60.40.3120 2 112 5.8E-38 T 14-10-2018 C3497_06485 a27a223c3905d6aae687aa9cba652c53 373 Pfam PF00246 Zinc carboxypeptidase 130 341 3.3E-24 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 C3497_06485 a27a223c3905d6aae687aa9cba652c53 373 Gene3D G3DSA:3.40.630.10 113 372 2.3E-65 T 14-10-2018 C3497_00870 612cf18a1c05596272c9ec6d9218230f 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 C3497_00870 612cf18a1c05596272c9ec6d9218230f 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.3E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_00870 612cf18a1c05596272c9ec6d9218230f 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.3E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_00870 612cf18a1c05596272c9ec6d9218230f 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.3E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_00870 612cf18a1c05596272c9ec6d9218230f 92 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.9E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_00870 612cf18a1c05596272c9ec6d9218230f 92 SUPERFAMILY SSF47729 1 91 3.24E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3497_00870 612cf18a1c05596272c9ec6d9218230f 92 Gene3D G3DSA:4.10.520.10 1 92 9.1E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3497_00870 612cf18a1c05596272c9ec6d9218230f 92 SMART SM00411 1 90 2.0E-39 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 147 210 7.2E-10 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 PIRSF PIRSF000813 1 402 2.4E-185 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 402 51.018 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 Pfam PF01743 Poly A polymerase head domain 3 122 1.5E-19 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 Gene3D G3DSA:1.10.3090.10 122 365 4.2E-37 T 14-10-2018 C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 Gene3D G3DSA:3.30.460.10 1 121 1.5E-31 T 14-10-2018 C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 Hamap MF_01262 CCA-adding enzyme [cca]. 1 399 40.677 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 Pfam PF01966 HD domain 227 326 1.2E-10 T 14-10-2018 IPR006674 HD domain C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 SUPERFAMILY SSF81301 2 119 7.63E-33 T 14-10-2018 C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 SUPERFAMILY SSF81891 121 351 5.23E-51 T 14-10-2018 C3497_13715 995045a677dc69d4b2bff7dd3f305c0b 402 SMART SM00471 222 336 2.6E-6 T 14-10-2018 IPR003607 HD/PDEase domain C3497_12935 c2c289e10ae09353ce1a7c66dbebaa10 389 Gene3D G3DSA:3.90.1150.10 21 382 4.8E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_12935 c2c289e10ae09353ce1a7c66dbebaa10 389 Gene3D G3DSA:3.40.640.10 45 283 4.8E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_12935 c2c289e10ae09353ce1a7c66dbebaa10 389 SUPERFAMILY SSF53383 9 385 4.71E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_12935 c2c289e10ae09353ce1a7c66dbebaa10 389 Pfam PF00155 Aminotransferase class I and II 33 382 2.4E-60 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_13360 b6e666ef1c1a789ff7735d1e897d00b6 235 Pfam PF03591 AzlC protein 19 160 1.7E-30 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease C3497_08220 f5e1e016f2b052a648259cfe8fe934df 130 Gene3D G3DSA:1.10.520.30 69 130 3.9E-9 T 14-10-2018 IPR023101 AF1862-like domain superfamily C3497_08220 f5e1e016f2b052a648259cfe8fe934df 130 Gene3D G3DSA:1.10.520.30 2 68 5.7E-20 T 14-10-2018 IPR023101 AF1862-like domain superfamily C3497_08220 f5e1e016f2b052a648259cfe8fe934df 130 TIGRFAM TIGR01881 cas_Cmr5: CRISPR type III-B/RAMP module-associated protein Cmr5 16 130 1.2E-16 T 14-10-2018 IPR010160 CRISPR-associated protein, Cmr5 C3497_08220 f5e1e016f2b052a648259cfe8fe934df 130 Pfam PF09701 CRISPR-associated protein (Cas_Cmr5) 17 129 2.6E-30 T 14-10-2018 IPR010160 CRISPR-associated protein, Cmr5 C3497_08220 f5e1e016f2b052a648259cfe8fe934df 130 SUPERFAMILY SSF158568 15 130 1.29E-29 T 14-10-2018 IPR023101 AF1862-like domain superfamily C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 Gene3D G3DSA:3.40.50.620 84 227 8.1E-101 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 1.4E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 54 1.4E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 PRINTS PR00987 Glutamyl-tRNA synthetase signature 12 24 1.4E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 1.4E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 Gene3D G3DSA:3.40.50.620 9 293 8.1E-101 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 9 280 1.3E-113 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 9 299 44.21 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 12 113 6.6E-26 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 146 246 4.9E-16 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 C3497_02380 e738235d2fd5b4f71b236e15d8e0d4a4 313 SUPERFAMILY SSF52374 9 297 8.16E-88 T 14-10-2018 C3497_06865 939deee2475ac3de13d8a6982b2640ac 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 C3497_06865 939deee2475ac3de13d8a6982b2640ac 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.8E-57 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 C3497_06865 939deee2475ac3de13d8a6982b2640ac 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 2.2E-39 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 C3497_06865 939deee2475ac3de13d8a6982b2640ac 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.4E-26 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C3497_06865 939deee2475ac3de13d8a6982b2640ac 107 SUPERFAMILY SSF89360 1 96 8.89E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3497_06865 939deee2475ac3de13d8a6982b2640ac 107 Gene3D G3DSA:2.60.300.12 2 107 9.5E-40 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Gene3D G3DSA:1.25.40.10 42 130 7.7E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Gene3D G3DSA:1.25.40.10 218 287 3.6E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Gene3D G3DSA:1.25.40.10 135 217 4.9E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 22 915 1.9E-237 T 14-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Pfam PF14559 Tetratricopeptide repeat 153 218 3.0E-8 T 14-10-2018 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Pfam PF14559 Tetratricopeptide repeat 865 919 3.1E-7 T 14-10-2018 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SUPERFAMILY SSF48452 146 309 7.33E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Gene3D G3DSA:1.25.40.10 566 716 2.6E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SUPERFAMILY SSF48452 572 752 1.1E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Pfam PF13432 Tetratricopeptide repeat 248 309 1.6E-5 T 14-10-2018 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Pfam PF13432 Tetratricopeptide repeat 42 100 7.1E-4 T 14-10-2018 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Pfam PF13432 Tetratricopeptide repeat 452 513 3.0E-9 T 14-10-2018 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Pfam PF13432 Tetratricopeptide repeat 762 821 5.2E-4 T 14-10-2018 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Pfam PF13432 Tetratricopeptide repeat 316 364 0.019 T 14-10-2018 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Pfam PF13432 Tetratricopeptide repeat 521 583 0.001 T 14-10-2018 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Pfam PF13432 Tetratricopeptide repeat 588 652 1.4E-5 T 14-10-2018 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SUPERFAMILY SSF48452 32 128 1.02E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Gene3D G3DSA:1.25.40.10 720 834 1.9E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Gene3D G3DSA:1.25.40.10 447 565 2.3E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Gene3D G3DSA:1.25.40.10 835 933 1.9E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Pfam PF13428 Tetratricopeptide repeat 383 421 4.9E-5 T 14-10-2018 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SUPERFAMILY SSF48452 724 919 1.59E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 Gene3D G3DSA:1.25.40.10 288 445 5.7E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SUPERFAMILY SSF48452 254 555 1.33E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 209 242 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 311 344 6.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 145 174 440.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 854 887 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 72 105 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 787 820 40.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 481 514 0.021 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 652 685 2.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 277 310 80.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 379 412 49.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 618 651 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 413 446 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 720 753 84.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 821 853 390.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_04630 1eedbb4e064b9a9579a404e06e55636c 935 SMART SM00028 888 921 280.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_05515 ae719ae873121e6ca895367da6452275 86 SUPERFAMILY SSF52833 3 76 5.84E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_05515 ae719ae873121e6ca895367da6452275 86 Gene3D G3DSA:3.40.30.10 1 77 5.5E-19 T 14-10-2018 C3497_05515 ae719ae873121e6ca895367da6452275 86 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 75 5.4E-13 T 14-10-2018 IPR008554 Glutaredoxin-like C3497_09360 dfaffbf1c1b03df37422863cfc28fad8 134 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 131 7.4E-33 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 C3497_09360 dfaffbf1c1b03df37422863cfc28fad8 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site C3497_09360 dfaffbf1c1b03df37422863cfc28fad8 134 PIRSF PIRSF002889 1 134 2.0E-41 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 C3497_09360 dfaffbf1c1b03df37422863cfc28fad8 134 Pfam PF00460 Flagella basal body rod protein 9 39 1.3E-8 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 C3497_09695 d2103658a135b307327d2940d39ab3b8 449 SUPERFAMILY SSF53041 14 168 1.44E-36 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 C3497_09695 d2103658a135b307327d2940d39ab3b8 449 Pfam PF07508 Recombinase 189 273 6.4E-13 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 C3497_09695 d2103658a135b307327d2940d39ab3b8 449 SMART SM00857 15 168 1.8E-57 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3497_09695 d2103658a135b307327d2940d39ab3b8 449 Gene3D G3DSA:1.10.10.2600 153 277 9.3E-26 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily C3497_09695 d2103658a135b307327d2940d39ab3b8 449 Gene3D G3DSA:3.40.50.1390 12 151 8.0E-42 T 14-10-2018 C3497_09695 d2103658a135b307327d2940d39ab3b8 449 Pfam PF00239 Resolvase, N terminal domain 16 168 1.0E-38 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3497_01800 1e69cabb91e34cd39498bb788388a813 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site C3497_01800 1e69cabb91e34cd39498bb788388a813 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 25.88 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C3497_01800 1e69cabb91e34cd39498bb788388a813 177 SUPERFAMILY SSF82679 3 113 7.32E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C3497_01800 1e69cabb91e34cd39498bb788388a813 177 Pfam PF02357 Transcription termination factor nusG 3 108 2.0E-29 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C3497_01800 1e69cabb91e34cd39498bb788388a813 177 Gene3D G3DSA:3.30.70.940 1 117 2.2E-48 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C3497_01800 1e69cabb91e34cd39498bb788388a813 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 1.9E-69 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C3497_01800 1e69cabb91e34cd39498bb788388a813 177 SMART SM00738 2 111 6.1E-51 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C3497_01800 1e69cabb91e34cd39498bb788388a813 177 Gene3D G3DSA:2.30.30.30 118 176 6.0E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C3497_01800 1e69cabb91e34cd39498bb788388a813 177 SMART SM00739 123 150 5.0E-5 T 14-10-2018 IPR005824 KOW C3497_01800 1e69cabb91e34cd39498bb788388a813 177 Pfam PF00467 KOW motif 127 160 2.1E-6 T 14-10-2018 IPR005824 KOW C3497_01800 1e69cabb91e34cd39498bb788388a813 177 SUPERFAMILY SSF50104 121 176 3.61E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C3497_01800 1e69cabb91e34cd39498bb788388a813 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 1.8E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C3497_01800 1e69cabb91e34cd39498bb788388a813 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.8E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C3497_01800 1e69cabb91e34cd39498bb788388a813 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 1.8E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C3497_00925 e660895e4c409227464bf1c89c78fcb6 360 Pfam PF04892 VanZ like family 25 127 4.6E-9 T 14-10-2018 IPR006976 VanZ-like C3497_06925 7f28c4e373dbbcf4626156b713b3b8e5 579 Gene3D G3DSA:3.40.50.720 283 420 6.1E-25 T 14-10-2018 C3497_06925 7f28c4e373dbbcf4626156b713b3b8e5 579 SUPERFAMILY SSF51735 292 428 1.58E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_06925 7f28c4e373dbbcf4626156b713b3b8e5 579 Gene3D G3DSA:3.40.50.720 127 270 1.1E-25 T 14-10-2018 C3497_06925 7f28c4e373dbbcf4626156b713b3b8e5 579 SUPERFAMILY SSF81324 7 150 6.02E-14 T 14-10-2018 C3497_06925 7f28c4e373dbbcf4626156b713b3b8e5 579 Gene3D G3DSA:1.10.287.70 16 122 6.6E-9 T 14-10-2018 C3497_06925 7f28c4e373dbbcf4626156b713b3b8e5 579 Pfam PF02254 TrkA-N domain 297 402 1.7E-15 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 C3497_06925 7f28c4e373dbbcf4626156b713b3b8e5 579 Pfam PF02254 TrkA-N domain 132 253 1.7E-19 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 C3497_06925 7f28c4e373dbbcf4626156b713b3b8e5 579 Pfam PF07885 Ion channel 24 106 4.2E-7 T 14-10-2018 IPR013099 Potassium channel domain C3497_06925 7f28c4e373dbbcf4626156b713b3b8e5 579 SUPERFAMILY SSF51735 131 276 1.09E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_13330 75800588e130ad67a6c4726232ce5c4c 320 Pfam PF00892 EamA-like transporter family 3 114 1.4E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_13330 75800588e130ad67a6c4726232ce5c4c 320 SUPERFAMILY SSF103481 41 139 8.63E-5 T 14-10-2018 C3497_07045 94abf8d26af80c51924f2a8b28263371 370 SUPERFAMILY SSF52540 52 211 1.42E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07045 94abf8d26af80c51924f2a8b28263371 370 Pfam PF03969 AFG1-like ATPase 15 364 2.7E-130 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 C3497_07045 94abf8d26af80c51924f2a8b28263371 370 Gene3D G3DSA:3.40.50.300 19 188 9.8E-21 T 14-10-2018 C3497_04405 140d41e239725464ba5f4992743a882d 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04405 140d41e239725464ba5f4992743a882d 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.956 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04405 140d41e239725464ba5f4992743a882d 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 7.1E-127 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04405 140d41e239725464ba5f4992743a882d 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 9.4E-191 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04405 140d41e239725464ba5f4992743a882d 417 SUPERFAMILY SSF56762 16 417 1.31E-140 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04405 140d41e239725464ba5f4992743a882d 417 Gene3D G3DSA:1.10.645.20 4 417 1.3E-177 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_08325 28b2c963823b09665f8167cd0f62851f 235 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 211 7.5E-63 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 C3497_08325 28b2c963823b09665f8167cd0f62851f 235 Gene3D G3DSA:3.40.630.70 60 229 5.1E-66 T 14-10-2018 C3497_08325 28b2c963823b09665f8167cd0f62851f 235 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 235 96.731 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 C3497_08325 28b2c963823b09665f8167cd0f62851f 235 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 203 2.3E-75 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 C3497_08325 28b2c963823b09665f8167cd0f62851f 235 SUPERFAMILY SSF55729 2 225 6.89E-92 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_08325 28b2c963823b09665f8167cd0f62851f 235 Gene3D G3DSA:2.30.210.20 4 59 1.4E-23 T 14-10-2018 C3497_00640 9fbf8d85f6e9db7c0362581e50a08d9b 82 Pfam PF01455 HupF/HypC family 1 66 1.2E-26 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C3497_00640 9fbf8d85f6e9db7c0362581e50a08d9b 82 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 69 1.2E-23 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C3497_00640 9fbf8d85f6e9db7c0362581e50a08d9b 82 Gene3D G3DSA:2.40.50.970 1 75 4.8E-27 T 14-10-2018 IPR037254 HupF/HypC superfamily C3497_00640 9fbf8d85f6e9db7c0362581e50a08d9b 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.0E-22 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C3497_00640 9fbf8d85f6e9db7c0362581e50a08d9b 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 1.0E-22 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C3497_00640 9fbf8d85f6e9db7c0362581e50a08d9b 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 57 69 1.0E-22 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C3497_00640 9fbf8d85f6e9db7c0362581e50a08d9b 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 1.0E-22 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C3497_00640 9fbf8d85f6e9db7c0362581e50a08d9b 82 SUPERFAMILY SSF159127 1 74 3.01E-24 T 14-10-2018 IPR037254 HupF/HypC superfamily C3497_00640 9fbf8d85f6e9db7c0362581e50a08d9b 82 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 14-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site C3497_14305 99f15a2dbcc51c9d81c872c87d06c4ae 377 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 11 371 29.63 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 C3497_14305 99f15a2dbcc51c9d81c872c87d06c4ae 377 Pfam PF00561 alpha/beta hydrolase fold 48 358 1.8E-37 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_14305 99f15a2dbcc51c9d81c872c87d06c4ae 377 SUPERFAMILY SSF53474 10 372 6.08E-106 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_14305 99f15a2dbcc51c9d81c872c87d06c4ae 377 Gene3D G3DSA:1.10.1740.110 184 289 3.9E-139 T 14-10-2018 C3497_14305 99f15a2dbcc51c9d81c872c87d06c4ae 377 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 19 367 2.8E-140 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 C3497_14305 99f15a2dbcc51c9d81c872c87d06c4ae 377 Gene3D G3DSA:3.40.50.1820 23 359 3.9E-139 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_14305 99f15a2dbcc51c9d81c872c87d06c4ae 377 PIRSF PIRSF000443 1 376 1.0E-140 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 C3497_01820 b6b062bbafc38d9de3a2435a1dc5b220 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 4.0E-18 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01820 b6b062bbafc38d9de3a2435a1dc5b220 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 25.897 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01820 b6b062bbafc38d9de3a2435a1dc5b220 124 SUPERFAMILY SSF48300 4 60 7.85E-17 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01820 b6b062bbafc38d9de3a2435a1dc5b220 124 SUPERFAMILY SSF54736 53 124 6.63E-25 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C3497_01820 b6b062bbafc38d9de3a2435a1dc5b220 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 5.6E-51 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01820 b6b062bbafc38d9de3a2435a1dc5b220 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 3.2E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01820 b6b062bbafc38d9de3a2435a1dc5b220 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 8.0E-25 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01820 b6b062bbafc38d9de3a2435a1dc5b220 124 Gene3D G3DSA:3.30.1390.10 54 124 4.4E-31 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C3497_01820 b6b062bbafc38d9de3a2435a1dc5b220 124 Gene3D G3DSA:1.20.5.710 2 53 2.4E-21 T 14-10-2018 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 333 6.6E-130 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 Gene3D G3DSA:3.30.360.10 155 323 8.3E-145 T 14-10-2018 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 PIRSF PIRSF000149 1 342 9.8E-136 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 2.0E-37 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 2.0E-37 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 2.0E-37 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 2.0E-37 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 2.0E-37 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 106 4.2E-35 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 Gene3D G3DSA:3.40.50.720 4 333 8.3E-145 T 14-10-2018 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 SUPERFAMILY SSF55347 156 322 3.57E-72 T 14-10-2018 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 154 161 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 SMART SM00846 3 156 5.6E-80 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 SUPERFAMILY SSF51735 1 179 1.68E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_03460 6272ba1a2b66158d7aaacd8523760bcc 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 321 3.2E-65 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_11120 c2d4a8dadecbf9d9b2950a760d77f030 210 Pfam PF14103 Domain of unknown function (DUF4276) 6 204 3.7E-27 T 14-10-2018 IPR025455 Protein of unknown function DUF4276 C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 444 623 3.5E-79 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 SUPERFAMILY SSF52540 19 230 2.86E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 Gene3D G3DSA:2.40.30.10 327 431 3.2E-36 T 14-10-2018 C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 SUPERFAMILY SSF52540 455 628 1.59E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 Gene3D G3DSA:3.40.50.300 436 632 3.3E-79 T 14-10-2018 C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 Pfam PF00009 Elongation factor Tu GTP binding domain 23 209 3.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 Pfam PF01583 Adenylylsulphate kinase 459 612 1.8E-74 T 14-10-2018 C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 SUPERFAMILY SSF50465 328 430 8.15E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 Gene3D G3DSA:2.40.30.10 238 325 1.7E-18 T 14-10-2018 C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 430 1.6E-148 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 Gene3D G3DSA:3.40.50.300 2 235 2.0E-47 T 14-10-2018 C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 458 630 39.884 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 C3497_01435 4ce49b79ff07e736f69b172ba91b855f 632 SUPERFAMILY SSF50447 239 325 5.82E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_05600 51418eded84d08b7d37b2749608551d3 152 PIRSF PIRSF032131 1 152 8.5E-44 T 14-10-2018 IPR009562 Protein of unknown function DUF1178 C3497_05600 51418eded84d08b7d37b2749608551d3 152 Pfam PF06676 Protein of unknown function (DUF1178) 2 146 1.0E-47 T 14-10-2018 IPR009562 Protein of unknown function DUF1178 C3497_08890 78f6ae5e1f7d28d67d90b36ad7ebc208 435 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 190 218 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 C3497_08890 78f6ae5e1f7d28d67d90b36ad7ebc208 435 SUPERFAMILY SSF56796 22 431 5.5E-96 T 14-10-2018 C3497_08890 78f6ae5e1f7d28d67d90b36ad7ebc208 435 Gene3D G3DSA:3.40.50.1970 10 201 2.0E-51 T 14-10-2018 C3497_08890 78f6ae5e1f7d28d67d90b36ad7ebc208 435 Gene3D G3DSA:1.20.1090.10 203 433 2.7E-54 T 14-10-2018 C3497_08890 78f6ae5e1f7d28d67d90b36ad7ebc208 435 Pfam PF00465 Iron-containing alcohol dehydrogenase 23 421 1.4E-98 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 Gene3D G3DSA:3.40.50.1370 20 312 2.6E-86 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 169 315 4.0E-24 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 161 1.8E-37 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 316 6.4E-89 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 1.9E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 1.9E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 148 165 1.9E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 298 312 1.9E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 274 279 1.9E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 233 242 1.9E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 319 39.858 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 149 160 2.4E-17 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 2.4E-17 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 282 305 2.4E-17 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 2.4E-17 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 Gene3D G3DSA:3.40.50.1370 149 296 2.6E-86 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3497_02185 320a04aa852cb19fc66045f01ed5e674 319 SUPERFAMILY SSF53671 12 318 7.59E-90 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3497_08640 060af35fe59c5dfdfbf369be09c54932 98 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 89 1.6E-20 T 14-10-2018 IPR011846 Cyd operon protein YbgE C3497_11980 d8d844507d3d07e2a7589974c2688f05 176 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 29 51 7.8E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_11980 d8d844507d3d07e2a7589974c2688f05 176 SUPERFAMILY SSF54523 31 132 3.14E-18 T 14-10-2018 C3497_11980 d8d844507d3d07e2a7589974c2688f05 176 Pfam PF07963 Prokaryotic N-terminal methylation motif 29 50 9.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_11980 d8d844507d3d07e2a7589974c2688f05 176 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 29 49 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_11980 d8d844507d3d07e2a7589974c2688f05 176 Gene3D G3DSA:3.30.700.10 31 171 2.4E-17 T 14-10-2018 C3497_11980 d8d844507d3d07e2a7589974c2688f05 176 Pfam PF12019 Type II transport protein GspH 66 168 4.2E-11 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 C3497_00170 41271c3ee3b625733f650c0d19c494e8 655 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 303 476 7.3E-49 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3497_00170 41271c3ee3b625733f650c0d19c494e8 655 SUPERFAMILY SSF48179 585 643 3.06E-8 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_00170 41271c3ee3b625733f650c0d19c494e8 655 SUPERFAMILY SSF48179 479 578 1.19E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_00170 41271c3ee3b625733f650c0d19c494e8 655 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 201 1.5E-31 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3497_00170 41271c3ee3b625733f650c0d19c494e8 655 SUPERFAMILY SSF51735 301 478 2.67E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_00170 41271c3ee3b625733f650c0d19c494e8 655 Gene3D G3DSA:3.90.226.10 1 295 9.1E-72 T 14-10-2018 C3497_00170 41271c3ee3b625733f650c0d19c494e8 655 Gene3D G3DSA:1.10.1040.50 483 653 6.8E-43 T 14-10-2018 C3497_00170 41271c3ee3b625733f650c0d19c494e8 655 Gene3D G3DSA:3.40.50.720 296 482 2.9E-55 T 14-10-2018 C3497_00170 41271c3ee3b625733f650c0d19c494e8 655 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 480 571 1.2E-23 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3497_00170 41271c3ee3b625733f650c0d19c494e8 655 SUPERFAMILY SSF52096 2 291 1.23E-55 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_06805 06041c94ac139718032a9db7db7834e6 1176 PIRSF PIRSF005719 1 1172 1.4E-243 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein C3497_06805 06041c94ac139718032a9db7db7834e6 1176 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1157 9.5E-64 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal C3497_06805 06041c94ac139718032a9db7db7834e6 1176 Gene3D G3DSA:3.40.50.300 1 398 2.0E-47 T 14-10-2018 C3497_06805 06041c94ac139718032a9db7db7834e6 1176 Gene3D G3DSA:3.40.50.300 948 1173 1.1E-47 T 14-10-2018 C3497_06805 06041c94ac139718032a9db7db7834e6 1176 SUPERFAMILY SSF52540 2 1170 4.12E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06805 06041c94ac139718032a9db7db7834e6 1176 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1166 22.447 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 C3497_06805 06041c94ac139718032a9db7db7834e6 1176 SUPERFAMILY SSF75553 481 674 5.89E-7 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 C3497_06805 06041c94ac139718032a9db7db7834e6 1176 Pfam PF06470 SMC proteins Flexible Hinge Domain 523 623 3.9E-9 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 C3497_06805 06041c94ac139718032a9db7db7834e6 1176 SUPERFAMILY SSF52540 4 787 2.6E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06805 06041c94ac139718032a9db7db7834e6 1176 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1164 0.0 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 C3497_09445 4723a981e87404851b588d264eb09b71 311 Gene3D G3DSA:1.20.120.1810 36 70 2.1E-5 T 14-10-2018 C3497_09445 4723a981e87404851b588d264eb09b71 311 SUPERFAMILY SSF88659 150 223 4.36E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3497_09445 4723a981e87404851b588d264eb09b71 311 SUPERFAMILY SSF88946 39 147 2.35E-46 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 Gene3D G3DSA:1.10.10.10 150 226 1.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_09445 4723a981e87404851b588d264eb09b71 311 Pfam PF04539 Sigma-70 region 3 157 230 1.7E-12 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 Pfam PF00140 Sigma-70 factor, region 1.2 39 72 1.4E-14 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_09445 4723a981e87404851b588d264eb09b71 311 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 1 311 38.56 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_09445 4723a981e87404851b588d264eb09b71 311 PRINTS PR00046 Major sigma-70 factor signature 270 285 1.7E-23 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 PRINTS PR00046 Major sigma-70 factor signature 285 296 1.7E-23 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 PRINTS PR00046 Major sigma-70 factor signature 101 114 1.7E-23 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 PRINTS PR00046 Major sigma-70 factor signature 125 133 1.7E-23 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 PRINTS PR00046 Major sigma-70 factor signature 249 261 1.7E-23 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 Pfam PF04545 Sigma-70, region 4 245 298 4.6E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 72 299 6.7E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 101 114 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 270 296 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_09445 4723a981e87404851b588d264eb09b71 311 Gene3D G3DSA:1.10.601.10 71 149 1.2E-44 T 14-10-2018 C3497_09445 4723a981e87404851b588d264eb09b71 311 SUPERFAMILY SSF88659 208 304 2.99E-23 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3497_09445 4723a981e87404851b588d264eb09b71 311 Gene3D G3DSA:1.10.10.10 227 309 8.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_09445 4723a981e87404851b588d264eb09b71 311 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 33 311 3.8E-134 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_09445 4723a981e87404851b588d264eb09b71 311 Pfam PF04542 Sigma-70 region 2 77 146 3.8E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C3497_01720 897681502c39f18d541d192140c358b9 410 Gene3D G3DSA:3.40.50.12780 2 314 2.1E-69 T 14-10-2018 C3497_01720 897681502c39f18d541d192140c358b9 410 Pfam PF00501 AMP-binding enzyme 121 275 2.2E-9 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3497_01720 897681502c39f18d541d192140c358b9 410 Gene3D G3DSA:3.30.300.30 315 408 1.3E-13 T 14-10-2018 C3497_01720 897681502c39f18d541d192140c358b9 410 SUPERFAMILY SSF56801 114 380 4.71E-32 T 14-10-2018 C3497_07925 b61956454cf226bf747989be48a73c15 401 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 176 312 6.8E-31 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_07925 b61956454cf226bf747989be48a73c15 401 Gene3D G3DSA:2.170.190.11 49 140 8.6E-130 T 14-10-2018 C3497_07925 b61956454cf226bf747989be48a73c15 401 SUPERFAMILY SSF53218 176 321 7.98E-45 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C3497_07925 b61956454cf226bf747989be48a73c15 401 SUPERFAMILY SSF63867 325 398 7.46E-15 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_07925 b61956454cf226bf747989be48a73c15 401 Gene3D G3DSA:3.90.105.10 26 173 8.6E-130 T 14-10-2018 C3497_07925 b61956454cf226bf747989be48a73c15 401 Pfam PF00994 Probable molybdopterin binding domain 180 314 7.1E-27 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_07925 b61956454cf226bf747989be48a73c15 401 Pfam PF03453 MoeA N-terminal region (domain I and II) 7 166 3.5E-42 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_07925 b61956454cf226bf747989be48a73c15 401 Pfam PF03454 MoeA C-terminal region (domain IV) 330 396 1.4E-11 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_07925 b61956454cf226bf747989be48a73c15 401 SMART SM00852 179 316 1.2E-47 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_07925 b61956454cf226bf747989be48a73c15 401 SUPERFAMILY SSF63882 5 174 1.96E-50 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_07925 b61956454cf226bf747989be48a73c15 401 Gene3D G3DSA:2.40.340.10 326 391 8.6E-130 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_07925 b61956454cf226bf747989be48a73c15 401 Gene3D G3DSA:3.40.980.10 174 325 8.6E-130 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 Gene3D G3DSA:3.30.70.2570 480 554 2.5E-32 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 SUPERFAMILY SSF54980 400 494 5.28E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 Gene3D G3DSA:3.30.70.3380 369 479 1.1E-41 T 14-10-2018 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 SUPERFAMILY SSF52540 3 206 1.28E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 PRINTS PR00315 GTP-binding elongation factor signature 7 20 3.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 PRINTS PR00315 GTP-binding elongation factor signature 127 136 3.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 PRINTS PR00315 GTP-binding elongation factor signature 50 58 3.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 PRINTS PR00315 GTP-binding elongation factor signature 75 85 3.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 PRINTS PR00315 GTP-binding elongation factor signature 91 102 3.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 Gene3D G3DSA:2.40.30.10 187 286 4.5E-33 T 14-10-2018 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 Gene3D G3DSA:3.40.50.300 1 186 5.0E-72 T 14-10-2018 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 176 2.0E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 SUPERFAMILY SSF54980 293 371 3.09E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 Pfam PF06421 GTP-binding protein LepA C-terminus 489 594 6.1E-50 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 TIGRFAM TIGR01393 lepA: elongation factor 4 5 596 2.5E-300 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 306.598 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 Gene3D G3DSA:3.30.70.870 287 368 3.1E-36 T 14-10-2018 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 Pfam PF03144 Elongation factor Tu domain 2 206 276 6.5E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 SUPERFAMILY SSF50447 166 289 3.93E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 Pfam PF00679 Elongation factor G C-terminus 400 485 5.6E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3497_05520 38e2a0d4930c6316c1db0998d60d69b9 599 Pfam PF00009 Elongation factor Tu GTP binding domain 5 182 4.7E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_00305 38dd671c05900d0b80c4366e759159ba 356 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 322 2.1E-97 T 14-10-2018 IPR016040 NAD(P)-binding domain C3497_00305 38dd671c05900d0b80c4366e759159ba 356 Gene3D G3DSA:3.40.50.720 2 321 3.5E-131 T 14-10-2018 C3497_00305 38dd671c05900d0b80c4366e759159ba 356 SUPERFAMILY SSF51735 2 347 4.59E-89 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_00305 38dd671c05900d0b80c4366e759159ba 356 Gene3D G3DSA:3.90.25.10 200 330 3.5E-131 T 14-10-2018 C3497_00305 38dd671c05900d0b80c4366e759159ba 356 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 334 7.2E-151 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 C3497_00305 38dd671c05900d0b80c4366e759159ba 356 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 1.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 1.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 1.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 1.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 1.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 Gene3D G3DSA:1.20.1640.10 15 506 3.5E-226 T 14-10-2018 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 SUPERFAMILY SSF82714 709 795 4.19E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 Gene3D G3DSA:3.30.70.1430 43 804 3.5E-226 T 14-10-2018 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 Pfam PF00873 AcrB/AcrD/AcrF family 7 1009 1.5E-139 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 Gene3D G3DSA:1.20.1640.10 507 1007 3.5E-226 T 14-10-2018 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 Gene3D G3DSA:3.30.70.1320 139 329 3.5E-226 T 14-10-2018 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 SUPERFAMILY SSF82693 556 605 3.66E-7 T 14-10-2018 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 Gene3D G3DSA:3.30.70.1440 658 855 3.5E-226 T 14-10-2018 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 SUPERFAMILY SSF82714 188 268 1.18E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 SUPERFAMILY SSF82693 139 326 9.42E-16 T 14-10-2018 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 SUPERFAMILY SSF82693 43 138 8.89E-17 T 14-10-2018 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 Gene3D G3DSA:3.30.2090.10 708 796 3.5E-226 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 SUPERFAMILY SSF82866 300 492 1.57E-33 T 14-10-2018 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 Gene3D G3DSA:3.30.2090.10 182 271 3.5E-226 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 Gene3D G3DSA:3.30.70.1430 557 657 3.5E-226 T 14-10-2018 C3497_03265 f1fd29e5fb38139ed1db6f3196793bc2 1022 SUPERFAMILY SSF82866 795 1013 2.75E-42 T 14-10-2018 C3497_09250 cc744c89f7a11c98a08157e94e8522be 246 SUPERFAMILY SSF160527 150 233 2.09E-7 T 14-10-2018 C3497_09250 cc744c89f7a11c98a08157e94e8522be 246 PRINTS PR01003 Flagellar assembly protein FliH signature 211 236 2.3E-15 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 C3497_09250 cc744c89f7a11c98a08157e94e8522be 246 PRINTS PR01003 Flagellar assembly protein FliH signature 10 29 2.3E-15 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 C3497_09250 cc744c89f7a11c98a08157e94e8522be 246 PRINTS PR01003 Flagellar assembly protein FliH signature 166 193 2.3E-15 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 C3497_09250 cc744c89f7a11c98a08157e94e8522be 246 PRINTS PR01003 Flagellar assembly protein FliH signature 127 144 2.3E-15 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 C3497_09250 cc744c89f7a11c98a08157e94e8522be 246 PRINTS PR01003 Flagellar assembly protein FliH signature 194 210 2.3E-15 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 C3497_09250 cc744c89f7a11c98a08157e94e8522be 246 PRINTS PR01003 Flagellar assembly protein FliH signature 65 87 2.3E-15 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 C3497_09250 cc744c89f7a11c98a08157e94e8522be 246 PRINTS PR01003 Flagellar assembly protein FliH signature 107 126 2.3E-15 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 C3497_09250 cc744c89f7a11c98a08157e94e8522be 246 Gene3D G3DSA:3.30.2320.30 136 236 4.7E-6 T 14-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 C3497_09250 cc744c89f7a11c98a08157e94e8522be 246 Pfam PF02108 Flagellar assembly protein FliH 105 229 2.5E-33 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE C3497_08855 037f19b5842c5b6bd18cacbfd65ca00b 276 Gene3D G3DSA:1.10.287.70 126 221 4.9E-36 T 14-10-2018 C3497_08855 037f19b5842c5b6bd18cacbfd65ca00b 276 Gene3D G3DSA:1.20.120.350 3 114 3.5E-28 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily C3497_08855 037f19b5842c5b6bd18cacbfd65ca00b 276 SUPERFAMILY SSF81324 12 223 1.1E-31 T 14-10-2018 C3497_08855 037f19b5842c5b6bd18cacbfd65ca00b 276 Pfam PF00520 Ion transport protein 14 228 7.9E-43 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 C3497_03400 1d99a8da243bdc657852df309bd444e2 522 Pfam PF03092 BT1 family 333 511 4.6E-12 T 14-10-2018 IPR039309 Biopterin transporter family C3497_05275 97540fa1044e5dc6cdc0dc906e19f6e3 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_05275 97540fa1044e5dc6cdc0dc906e19f6e3 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.8E-39 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_05275 97540fa1044e5dc6cdc0dc906e19f6e3 89 SMART SM01387 8 88 8.8E-54 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_05275 97540fa1044e5dc6cdc0dc906e19f6e3 89 Gene3D G3DSA:1.10.287.10 2 89 4.9E-36 T 14-10-2018 C3497_05275 97540fa1044e5dc6cdc0dc906e19f6e3 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.962 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_05275 97540fa1044e5dc6cdc0dc906e19f6e3 89 SUPERFAMILY SSF47060 3 89 1.0E-35 T 14-10-2018 IPR009068 S15/NS1, RNA-binding C3497_05275 97540fa1044e5dc6cdc0dc906e19f6e3 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 7.0E-35 T 14-10-2018 C3497_05275 97540fa1044e5dc6cdc0dc906e19f6e3 89 Pfam PF00312 Ribosomal protein S15 8 88 2.7E-38 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_03285 9dd304e24d46d8bd3131c6c048cb8aed 437 PIRSF PIRSF001362 1 437 1.2E-217 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3497_03285 9dd304e24d46d8bd3131c6c048cb8aed 437 Pfam PF00463 Isocitrate lyase family 258 436 1.3E-50 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3497_03285 9dd304e24d46d8bd3131c6c048cb8aed 437 Pfam PF00463 Isocitrate lyase family 14 257 2.7E-64 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3497_03285 9dd304e24d46d8bd3131c6c048cb8aed 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 C3497_03285 9dd304e24d46d8bd3131c6c048cb8aed 437 SUPERFAMILY SSF51621 6 436 3.41E-153 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3497_03285 9dd304e24d46d8bd3131c6c048cb8aed 437 Gene3D G3DSA:3.20.20.60 1 419 5.1E-181 T 14-10-2018 C3497_03285 9dd304e24d46d8bd3131c6c048cb8aed 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 3.6E-109 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3497_03285 9dd304e24d46d8bd3131c6c048cb8aed 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 5.8E-84 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3497_06790 11cfb9966d328194a5cba71e3cc00a18 290 SUPERFAMILY SSF53448 4 278 3.25E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_06790 11cfb9966d328194a5cba71e3cc00a18 290 Gene3D G3DSA:3.90.550.10 1 289 2.2E-88 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_06790 11cfb9966d328194a5cba71e3cc00a18 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 267 1.5E-112 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 C3497_06790 11cfb9966d328194a5cba71e3cc00a18 290 Pfam PF00483 Nucleotidyl transferase 11 267 2.4E-28 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 241 1.2E-51 T 14-10-2018 C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 SUPERFAMILY SSF51735 6 244 1.26E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 Gene3D G3DSA:3.40.50.720 1 244 1.8E-65 T 14-10-2018 C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_14580 66a95e93003751522f020fe9a9fbbf52 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_10225 0df612117b941918beb3db837fb4ae52 125 SMART SM00905 4 113 9.7E-34 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C3497_10225 0df612117b941918beb3db837fb4ae52 125 SUPERFAMILY SSF55620 1 115 8.89E-30 T 14-10-2018 C3497_10225 0df612117b941918beb3db837fb4ae52 125 Pfam PF02152 Dihydroneopterin aldolase 4 111 1.3E-25 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C3497_10225 0df612117b941918beb3db837fb4ae52 125 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 8.1E-23 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C3497_10225 0df612117b941918beb3db837fb4ae52 125 Gene3D G3DSA:3.30.1130.10 1 118 2.7E-32 T 14-10-2018 C3497_11685 c347d1ced865093a8d0227c1ba45b9d3 186 TIGRFAM TIGR01841 phasin: phasin family protein 26 111 1.0E-25 T 14-10-2018 IPR010127 Phasin, subfamily 1 C3497_11685 c347d1ced865093a8d0227c1ba45b9d3 186 Pfam PF09361 Phasin protein 6 105 5.5E-29 T 14-10-2018 IPR018968 Phasin C3497_12105 1533551f111a73e5a9693652c72ff77b 379 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 329 34.081 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 PRINTS PR00423 Cell division protein FtsZ signature 95 115 3.4E-44 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 PRINTS PR00423 Cell division protein FtsZ signature 123 144 3.4E-44 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 PRINTS PR00423 Cell division protein FtsZ signature 207 228 3.4E-44 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 PRINTS PR00423 Cell division protein FtsZ signature 184 206 3.4E-44 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 SMART SM00865 202 320 1.4E-47 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 SUPERFAMILY SSF55307 199 314 1.35E-35 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 SMART SM00864 13 200 5.6E-102 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 168 1.6E-34 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 Gene3D G3DSA:3.40.50.1440 11 312 7.7E-106 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 SUPERFAMILY SSF52490 13 203 2.62E-63 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 316 2.4E-111 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 C3497_12105 1533551f111a73e5a9693652c72ff77b 379 Pfam PF12327 FtsZ family, C-terminal domain 217 311 1.2E-27 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 Pfam PF00005 ABC transporter 36 192 7.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 SUPERFAMILY SSF52540 16 263 4.67E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 243 327 2.3E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 585 671 2.1E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 Gene3D G3DSA:3.40.50.300 354 677 9.4E-100 T 14-10-2018 C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 Gene3D G3DSA:3.40.50.300 13 340 2.7E-86 T 14-10-2018 C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 Pfam PF00005 ABC transporter 384 536 6.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 SMART SM00382 392 585 4.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 SMART SM00382 43 242 6.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 SUPERFAMILY SSF52540 392 660 2.09E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 587 652 2.8E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 C3497_07190 fc4b0b74ef90c71d01dd3bba4f039d27 683 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 308 2.8E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 C3497_03360 6223440556ad9a6bf7cef91df1d738ca 591 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 6 577 45.138 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 C3497_03360 6223440556ad9a6bf7cef91df1d738ca 591 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 12 576 0.0 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 C3497_03360 6223440556ad9a6bf7cef91df1d738ca 591 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 14 573 2.4E-256 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 C3497_03360 6223440556ad9a6bf7cef91df1d738ca 591 PIRSF PIRSF000719 6 582 3.0E-234 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 C3497_05965 81d0fbf1f28d2bb2096ed63bfcbedaaa 315 Pfam PF01584 CheW-like domain 27 162 3.1E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_05965 81d0fbf1f28d2bb2096ed63bfcbedaaa 315 SMART SM00260 23 161 1.6E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_05965 81d0fbf1f28d2bb2096ed63bfcbedaaa 315 Gene3D G3DSA:2.40.50.180 45 161 2.1E-29 T 14-10-2018 C3497_05965 81d0fbf1f28d2bb2096ed63bfcbedaaa 315 Pfam PF00072 Response regulator receiver domain 184 304 2.5E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05965 81d0fbf1f28d2bb2096ed63bfcbedaaa 315 SMART SM00448 182 307 1.1E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05965 81d0fbf1f28d2bb2096ed63bfcbedaaa 315 PIRSF PIRSF002867 7 315 1.0E-93 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV C3497_05965 81d0fbf1f28d2bb2096ed63bfcbedaaa 315 Gene3D G3DSA:2.30.30.40 30 155 2.1E-29 T 14-10-2018 C3497_05965 81d0fbf1f28d2bb2096ed63bfcbedaaa 315 Gene3D G3DSA:3.40.50.2300 180 315 8.6E-24 T 14-10-2018 C3497_05965 81d0fbf1f28d2bb2096ed63bfcbedaaa 315 SUPERFAMILY SSF50341 22 163 1.31E-32 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C3497_05965 81d0fbf1f28d2bb2096ed63bfcbedaaa 315 SUPERFAMILY SSF52172 180 313 4.7E-24 T 14-10-2018 IPR011006 CheY-like superfamily C3497_13645 eae6735d7d256508ba8f294ededd202d 151 Gene3D G3DSA:1.10.10.10 52 93 1.9E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_13645 eae6735d7d256508ba8f294ededd202d 151 Gene3D G3DSA:1.10.10.10 7 47 3.7E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_13645 eae6735d7d256508ba8f294ededd202d 151 Gene3D G3DSA:1.10.10.10 99 146 9.0E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_13645 eae6735d7d256508ba8f294ededd202d 151 Hamap MF_01114 Regulatory protein RecX [recX]. 5 148 14.097 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 C3497_13645 eae6735d7d256508ba8f294ededd202d 151 Pfam PF02631 RecX family 32 143 6.5E-29 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 C3497_06075 7758aa5d7c7a674d3c266ee1957187f3 259 Pfam PF05742 Transport and Golgi organisation 2 1 236 1.8E-63 T 14-10-2018 IPR008551 Transport and Golgi organisation protein 2 C3497_06075 7758aa5d7c7a674d3c266ee1957187f3 259 Gene3D G3DSA:3.60.60.10 4 248 3.8E-6 T 14-10-2018 C3497_03560 5934227072461d0e804dfae447603aa5 297 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 9 277 27.61 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 C3497_03560 5934227072461d0e804dfae447603aa5 297 SUPERFAMILY SSF53335 34 227 6.44E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_03560 5934227072461d0e804dfae447603aa5 297 Pfam PF08241 Methyltransferase domain 54 161 2.6E-18 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C3497_03560 5934227072461d0e804dfae447603aa5 297 Gene3D G3DSA:3.40.50.150 30 229 6.0E-32 T 14-10-2018 C3497_09970 9e1f53b9b797eb7b9ff291a8801cf210 228 Pfam PF13545 Crp-like helix-turn-helix domain 155 226 9.1E-18 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_09970 9e1f53b9b797eb7b9ff291a8801cf210 228 Pfam PF00027 Cyclic nucleotide-binding domain 36 123 5.1E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_09970 9e1f53b9b797eb7b9ff291a8801cf210 228 SUPERFAMILY SSF46785 153 226 1.92E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_09970 9e1f53b9b797eb7b9ff291a8801cf210 228 SMART SM00100 17 135 5.8E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_09970 9e1f53b9b797eb7b9ff291a8801cf210 228 Gene3D G3DSA:2.60.120.10 4 149 1.6E-42 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_09970 9e1f53b9b797eb7b9ff291a8801cf210 228 Gene3D G3DSA:1.10.10.10 150 227 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_09970 9e1f53b9b797eb7b9ff291a8801cf210 228 SUPERFAMILY SSF51206 10 149 1.03E-35 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C3497_09970 9e1f53b9b797eb7b9ff291a8801cf210 228 SMART SM00419 171 219 1.8E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_13375 b01c2a767a5eba368dbd2b66cb15ed1b 882 Gene3D G3DSA:3.40.50.300 482 870 6.5E-12 T 14-10-2018 C3497_13375 b01c2a767a5eba368dbd2b66cb15ed1b 882 SUPERFAMILY SSF52540 1 864 1.93E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13375 b01c2a767a5eba368dbd2b66cb15ed1b 882 Pfam PF13476 AAA domain 5 57 8.1E-12 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain C3497_08780 1c7259eb03dc9c9dc62f8d8516f86b82 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 279 1.0E-76 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 C3497_08780 1c7259eb03dc9c9dc62f8d8516f86b82 285 Pfam PF02666 Phosphatidylserine decarboxylase 63 278 2.6E-58 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 C3497_08780 1c7259eb03dc9c9dc62f8d8516f86b82 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 281 46.686 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 C3497_13580 c703ff5d97cb1136ddb9cd97befc9415 559 SUPERFAMILY SSF52540 54 266 5.28E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13580 c703ff5d97cb1136ddb9cd97befc9415 559 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 1 555 47.582 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 C3497_13580 c703ff5d97cb1136ddb9cd97befc9415 559 Gene3D G3DSA:3.40.50.300 421 546 5.5E-25 T 14-10-2018 C3497_13580 c703ff5d97cb1136ddb9cd97befc9415 559 Gene3D G3DSA:3.40.50.300 313 420 1.1E-17 T 14-10-2018 C3497_13580 c703ff5d97cb1136ddb9cd97befc9415 559 Pfam PF13604 AAA domain 111 268 1.3E-29 T 14-10-2018 C3497_13580 c703ff5d97cb1136ddb9cd97befc9415 559 Pfam PF13538 UvrD-like helicase C-terminal domain 486 532 3.8E-15 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain C3497_13580 c703ff5d97cb1136ddb9cd97befc9415 559 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 40 557 2.5E-145 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 C3497_13580 c703ff5d97cb1136ddb9cd97befc9415 559 SUPERFAMILY SSF52540 233 556 4.25E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13580 c703ff5d97cb1136ddb9cd97befc9415 559 Gene3D G3DSA:3.40.50.300 62 301 3.7E-63 T 14-10-2018 C3497_06235 89f0591686ea5265f81ef885075190b3 351 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 1 337 26.141 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 C3497_06235 89f0591686ea5265f81ef885075190b3 351 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 6 336 2.2E-107 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 C3497_06235 89f0591686ea5265f81ef885075190b3 351 Pfam PF03116 NQR2, RnfD, RnfE family 5 335 2.4E-105 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 C3497_03725 07d259a4c649019289b2080fed61ce31 485 SMART SM00382 267 402 1.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_03725 07d259a4c649019289b2080fed61ce31 485 Pfam PF00448 SRP54-type protein, GTPase domain 270 456 6.7E-30 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_03725 07d259a4c649019289b2080fed61ce31 485 SUPERFAMILY SSF52540 265 456 9.41E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_03725 07d259a4c649019289b2080fed61ce31 485 Gene3D G3DSA:1.20.120.1380 220 264 6.7E-49 T 14-10-2018 C3497_03725 07d259a4c649019289b2080fed61ce31 485 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 356 1.2E-79 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 C3497_03725 07d259a4c649019289b2080fed61ce31 485 SMART SM00962 268 459 4.4E-44 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3497_03725 07d259a4c649019289b2080fed61ce31 485 Gene3D G3DSA:3.40.50.300 265 446 6.7E-49 T 14-10-2018 C3497_10680 fe416b4c0550b71cf38cd9229e2aab1c 111 Pfam PF13663 Domain of unknown function (DUF4148) 8 70 1.6E-10 T 14-10-2018 IPR025421 Protein of unknown function DUF4148 C3497_01975 8b40334cfd8f205cca718c51d04f320a 120 SUPERFAMILY SSF46946 2 114 3.53E-47 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 C3497_01975 8b40334cfd8f205cca718c51d04f320a 120 Pfam PF00416 Ribosomal protein S13/S18 3 108 7.5E-34 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01975 8b40334cfd8f205cca718c51d04f320a 120 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.2E-55 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01975 8b40334cfd8f205cca718c51d04f320a 120 Gene3D G3DSA:1.10.8.50 1 71 5.3E-29 T 14-10-2018 C3497_01975 8b40334cfd8f205cca718c51d04f320a 120 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01975 8b40334cfd8f205cca718c51d04f320a 120 Gene3D G3DSA:4.10.910.10 72 117 6.4E-27 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01975 8b40334cfd8f205cca718c51d04f320a 120 PIRSF PIRSF002134 1 120 3.5E-45 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01975 8b40334cfd8f205cca718c51d04f320a 120 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.97 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_02450 475ca0bdd890a430af5b9c1f01726bd3 158 SUPERFAMILY SSF102405 4 102 6.1E-9 T 14-10-2018 C3497_02450 475ca0bdd890a430af5b9c1f01726bd3 158 Pfam PF12694 Putative molybdenum carrier 6 150 1.1E-53 T 14-10-2018 IPR024755 Molybdenum cofactor carrier, putative C3497_02450 475ca0bdd890a430af5b9c1f01726bd3 158 Gene3D G3DSA:3.40.50.450 1 151 2.4E-54 T 14-10-2018 C3497_09400 8ba2fcd5caabc29e9b2ec325b09da0d0 373 SMART SM00558 95 221 6.5E-5 T 14-10-2018 IPR003347 JmjC domain C3497_09400 8ba2fcd5caabc29e9b2ec325b09da0d0 373 SUPERFAMILY SSF51197 4 290 1.03E-71 T 14-10-2018 C3497_09400 8ba2fcd5caabc29e9b2ec325b09da0d0 373 Pfam PF08007 Cupin superfamily protein 11 310 1.1E-87 T 14-10-2018 IPR003347 JmjC domain C3497_09400 8ba2fcd5caabc29e9b2ec325b09da0d0 373 Gene3D G3DSA:1.10.10.2510 207 371 8.9E-22 T 14-10-2018 C3497_09400 8ba2fcd5caabc29e9b2ec325b09da0d0 373 Gene3D G3DSA:2.60.120.650 1 206 1.0E-80 T 14-10-2018 C3497_06380 093d181f6fa084c36715f2110323fad3 423 Gene3D G3DSA:3.30.450.20 321 423 1.5E-8 T 14-10-2018 C3497_06380 093d181f6fa084c36715f2110323fad3 423 Gene3D G3DSA:3.20.20.450 24 268 4.1E-56 T 14-10-2018 IPR035919 EAL domain superfamily C3497_06380 093d181f6fa084c36715f2110323fad3 423 Pfam PF00563 EAL domain 35 261 5.1E-45 T 14-10-2018 IPR001633 EAL domain C3497_06380 093d181f6fa084c36715f2110323fad3 423 SMART SM00052 28 266 1.5E-22 T 14-10-2018 IPR001633 EAL domain C3497_06380 093d181f6fa084c36715f2110323fad3 423 SUPERFAMILY SSF141868 30 262 4.32E-55 T 14-10-2018 IPR035919 EAL domain superfamily C3497_06380 093d181f6fa084c36715f2110323fad3 423 SUPERFAMILY SSF103190 293 422 7.22E-15 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily C3497_03015 3c4fe7fe7f826057b060da3aa859ac03 96 SMART SM00883 2 94 1.2E-59 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_03015 3c4fe7fe7f826057b060da3aa859ac03 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.423 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_03015 3c4fe7fe7f826057b060da3aa859ac03 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 C3497_03015 3c4fe7fe7f826057b060da3aa859ac03 96 SUPERFAMILY SSF50129 1 95 1.7E-35 T 14-10-2018 IPR011032 GroES-like superfamily C3497_03015 3c4fe7fe7f826057b060da3aa859ac03 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.8E-36 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_03015 3c4fe7fe7f826057b060da3aa859ac03 96 Gene3D G3DSA:2.30.33.40 1 96 6.7E-40 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 C3497_03015 3c4fe7fe7f826057b060da3aa859ac03 96 PRINTS PR00297 10kDa chaperonin signature 25 46 6.0E-34 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_03015 3c4fe7fe7f826057b060da3aa859ac03 96 PRINTS PR00297 10kDa chaperonin signature 81 94 6.0E-34 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_03015 3c4fe7fe7f826057b060da3aa859ac03 96 PRINTS PR00297 10kDa chaperonin signature 60 72 6.0E-34 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_03015 3c4fe7fe7f826057b060da3aa859ac03 96 PRINTS PR00297 10kDa chaperonin signature 3 18 6.0E-34 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_04640 5305b40a3abbd4593fab5b0e0e9bfd33 305 SMART SM00671 71 106 1.9E-7 T 14-10-2018 IPR006597 Sel1-like repeat C3497_04640 5305b40a3abbd4593fab5b0e0e9bfd33 305 SMART SM00671 35 70 3.7 T 14-10-2018 IPR006597 Sel1-like repeat C3497_04640 5305b40a3abbd4593fab5b0e0e9bfd33 305 SUPERFAMILY SSF81901 34 110 2.35E-13 T 14-10-2018 C3497_04640 5305b40a3abbd4593fab5b0e0e9bfd33 305 Gene3D G3DSA:1.10.530.10 137 280 2.5E-38 T 14-10-2018 C3497_04640 5305b40a3abbd4593fab5b0e0e9bfd33 305 Gene3D G3DSA:1.25.40.10 27 136 2.6E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_04640 5305b40a3abbd4593fab5b0e0e9bfd33 305 Pfam PF01464 Transglycosylase SLT domain 161 255 2.3E-23 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3497_04640 5305b40a3abbd4593fab5b0e0e9bfd33 305 SUPERFAMILY SSF53955 138 279 3.99E-42 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_04640 5305b40a3abbd4593fab5b0e0e9bfd33 305 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 176 204 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 C3497_13875 e5ca1e051cb516211e88d1092327cd4b 320 SMART SM00849 34 223 2.4E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_13875 e5ca1e051cb516211e88d1092327cd4b 320 Gene3D G3DSA:3.60.15.10 12 242 3.2E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_13875 e5ca1e051cb516211e88d1092327cd4b 320 Pfam PF00753 Metallo-beta-lactamase superfamily 34 191 5.7E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_13875 e5ca1e051cb516211e88d1092327cd4b 320 SUPERFAMILY SSF56281 16 311 1.68E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_05540 cb45085ee2f888d8d893e809ddc8d5e4 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 16 285 7.6E-86 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_05540 cb45085ee2f888d8d893e809ddc8d5e4 303 Pfam PF07650 KH domain 215 290 9.0E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_05540 cb45085ee2f888d8d893e809ddc8d5e4 303 Hamap MF_00367 GTPase Era [era]. 13 302 36.07 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_05540 cb45085ee2f888d8d893e809ddc8d5e4 303 Gene3D G3DSA:3.40.50.300 13 190 4.3E-47 T 14-10-2018 C3497_05540 cb45085ee2f888d8d893e809ddc8d5e4 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 172 4.1E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_05540 cb45085ee2f888d8d893e809ddc8d5e4 303 SUPERFAMILY SSF54814 188 303 3.6E-41 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C3497_05540 cb45085ee2f888d8d893e809ddc8d5e4 303 Pfam PF01926 50S ribosome-binding GTPase 18 131 1.7E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3497_05540 cb45085ee2f888d8d893e809ddc8d5e4 303 SUPERFAMILY SSF52540 18 210 1.66E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05540 cb45085ee2f888d8d893e809ddc8d5e4 303 Gene3D G3DSA:3.30.300.20 192 303 1.1E-38 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3497_12340 65a27ee5bbb5c87aa0b78a52c113476b 133 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 2.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12340 65a27ee5bbb5c87aa0b78a52c113476b 133 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.2E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12340 65a27ee5bbb5c87aa0b78a52c113476b 133 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_05470 cffe4eecf176b035fbb9fba15a5ce75d 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site C3497_05470 cffe4eecf176b035fbb9fba15a5ce75d 79 SUPERFAMILY SSF47336 1 77 1.57E-24 T 14-10-2018 IPR036736 ACP-like superfamily C3497_05470 cffe4eecf176b035fbb9fba15a5ce75d 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 3.0E-4 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 C3497_05470 cffe4eecf176b035fbb9fba15a5ce75d 79 Gene3D G3DSA:1.10.1200.10 1 77 1.0E-30 T 14-10-2018 IPR036736 ACP-like superfamily C3497_05470 cffe4eecf176b035fbb9fba15a5ce75d 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 1.1E-35 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 C3497_05470 cffe4eecf176b035fbb9fba15a5ce75d 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.1E-17 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain C3497_05470 cffe4eecf176b035fbb9fba15a5ce75d 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.613 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 C3497_01620 25b1da6ac8ffb1043fdf483d3c0285d3 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 258 1.1E-50 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3497_01620 25b1da6ac8ffb1043fdf483d3c0285d3 259 Gene3D G3DSA:1.10.12.10 204 259 7.9E-25 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal C3497_01620 25b1da6ac8ffb1043fdf483d3c0285d3 259 Gene3D G3DSA:3.90.226.10 1 203 1.1E-64 T 14-10-2018 C3497_01620 25b1da6ac8ffb1043fdf483d3c0285d3 259 SUPERFAMILY SSF52096 2 259 1.76E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_13020 cd874472e3e4431df1f8a7136c70feed 304 SUPERFAMILY SSF49879 205 267 3.06E-15 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 C3497_13020 cd874472e3e4431df1f8a7136c70feed 304 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 7 163 1.2E-14 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 C3497_13020 cd874472e3e4431df1f8a7136c70feed 304 Pfam PF00498 FHA domain 218 260 1.8E-9 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C3497_13020 cd874472e3e4431df1f8a7136c70feed 304 SUPERFAMILY SSF55073 6 176 5.18E-39 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_13020 cd874472e3e4431df1f8a7136c70feed 304 Gene3D G3DSA:3.30.70.1230 2 178 8.6E-41 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_13020 cd874472e3e4431df1f8a7136c70feed 304 Gene3D G3DSA:2.60.200.20 187 288 5.1E-14 T 14-10-2018 C3497_13020 cd874472e3e4431df1f8a7136c70feed 304 SMART SM00240 216 265 1.9E-4 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C3497_02935 35d0abb6509dbac7433bcb409cf53128 397 PIRSF PIRSF003085 9 393 6.5E-114 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 C3497_02935 35d0abb6509dbac7433bcb409cf53128 397 Pfam PF02353 Mycolic acid cyclopropane synthetase 120 382 5.3E-90 T 14-10-2018 C3497_02935 35d0abb6509dbac7433bcb409cf53128 397 SUPERFAMILY SSF53335 129 384 5.63E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_02935 35d0abb6509dbac7433bcb409cf53128 397 Gene3D G3DSA:3.40.50.150 127 390 4.1E-96 T 14-10-2018 C3497_06705 e4c39451b27fd840f5a91febb0e38405 98 SUPERFAMILY SSF82657 4 91 1.31E-25 T 14-10-2018 IPR036065 BolA-like superfamily C3497_06705 e4c39451b27fd840f5a91febb0e38405 98 PIRSF PIRSF003113 1 98 2.9E-28 T 14-10-2018 IPR002634 BolA protein C3497_06705 e4c39451b27fd840f5a91febb0e38405 98 Gene3D G3DSA:3.30.300.90 2 91 2.1E-29 T 14-10-2018 C3497_06705 e4c39451b27fd840f5a91febb0e38405 98 Pfam PF01722 BolA-like protein 11 87 2.2E-27 T 14-10-2018 IPR002634 BolA protein C3497_11770 5b13909d43053c9c620bdd32e21272bc 216 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 22 213 3.0E-18 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 C3497_11770 5b13909d43053c9c620bdd32e21272bc 216 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 19 216 29.486 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 C3497_11770 5b13909d43053c9c620bdd32e21272bc 216 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 45 206 4.4E-45 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like C3497_11770 5b13909d43053c9c620bdd32e21272bc 216 Gene3D G3DSA:2.50.20.10 31 216 4.0E-53 T 14-10-2018 C3497_11770 5b13909d43053c9c620bdd32e21272bc 216 SUPERFAMILY SSF89392 35 216 6.28E-48 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 SUPERFAMILY SSF52440 5 97 1.63E-30 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 Pfam PF07478 D-ala D-ala ligase C-terminus 104 295 1.1E-52 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 242 270 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 299 1.1E-98 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 Gene3D G3DSA:3.30.1490.20 113 177 1.2E-22 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 Pfam PF01820 D-ala D-ala ligase N-terminus 5 87 1.9E-18 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 SUPERFAMILY SSF56059 98 296 1.43E-55 T 14-10-2018 C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 64 75 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 300 33.582 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 PIRSF PIRSF039102 39 301 1.9E-78 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 PIRSF PIRSF039102 2 48 2.1E-8 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_12120 bc6bafdb26db4aa6ede2b139c85331fd 302 Gene3D G3DSA:3.40.50.20 1 85 1.9E-32 T 14-10-2018 C3497_04515 f0acd1215c408c84b298c1429104b971 291 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 281 2.5E-15 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase C3497_04515 f0acd1215c408c84b298c1429104b971 291 Gene3D G3DSA:3.60.10.10 2 289 8.3E-51 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3497_04515 f0acd1215c408c84b298c1429104b971 291 SUPERFAMILY SSF56219 4 287 2.49E-36 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3497_07770 2b567c061659feca8be221c5607cf3bb 284 SMART SM01049 156 236 0.0022 T 14-10-2018 IPR033480 Single Cache domain 2 C3497_07770 2b567c061659feca8be221c5607cf3bb 284 SMART SM01049 22 107 2.0E-10 T 14-10-2018 IPR033480 Single Cache domain 2 C3497_07770 2b567c061659feca8be221c5607cf3bb 284 Pfam PF08269 Cache domain 44 272 7.6E-24 T 14-10-2018 IPR004010 Double Cache domain 2 C3497_07770 2b567c061659feca8be221c5607cf3bb 284 Gene3D G3DSA:3.30.450.20 161 284 1.3E-15 T 14-10-2018 C3497_07770 2b567c061659feca8be221c5607cf3bb 284 Gene3D G3DSA:3.30.450.20 22 160 8.1E-19 T 14-10-2018 C3497_04410 708fc2d81ca08b95dd0d550d892d0605 159 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 157 3.6E-61 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04410 708fc2d81ca08b95dd0d550d892d0605 159 PIRSF PIRSF000216 1 159 3.8E-56 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04410 708fc2d81ca08b95dd0d550d892d0605 159 SUPERFAMILY SSF52833 2 157 6.49E-52 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_04410 708fc2d81ca08b95dd0d550d892d0605 159 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 156 3.0E-49 T 14-10-2018 C3497_04410 708fc2d81ca08b95dd0d550d892d0605 159 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04410 708fc2d81ca08b95dd0d550d892d0605 159 Gene3D G3DSA:3.40.30.10 74 159 6.5E-24 T 14-10-2018 C3497_04410 708fc2d81ca08b95dd0d550d892d0605 159 Gene3D G3DSA:1.10.10.1590 1 73 6.2E-25 T 14-10-2018 C3497_03305 8763ef711ca1cf3eb34203f256b119aa 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site C3497_03305 8763ef711ca1cf3eb34203f256b119aa 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 8.8E-32 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3497_03305 8763ef711ca1cf3eb34203f256b119aa 67 Gene3D G3DSA:2.40.50.140 1 65 2.1E-31 T 14-10-2018 C3497_03305 8763ef711ca1cf3eb34203f256b119aa 67 PIRSF PIRSF002599 1 67 1.6E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 C3497_03305 8763ef711ca1cf3eb34203f256b119aa 67 PRINTS PR00050 Cold shock protein signature 25 34 6.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3497_03305 8763ef711ca1cf3eb34203f256b119aa 67 PRINTS PR00050 Cold shock protein signature 4 19 6.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3497_03305 8763ef711ca1cf3eb34203f256b119aa 67 PRINTS PR00050 Cold shock protein signature 40 58 6.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3497_03305 8763ef711ca1cf3eb34203f256b119aa 67 SUPERFAMILY SSF50249 1 66 4.07E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_03305 8763ef711ca1cf3eb34203f256b119aa 67 SMART SM00357 3 67 5.0E-32 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C3497_09335 d6c7d262143b01ebcee9680f1a554085 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 1.0E-114 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 C3497_09335 d6c7d262143b01ebcee9680f1a554085 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 8.2E-23 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain C3497_09335 d6c7d262143b01ebcee9680f1a554085 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site C3497_09335 d6c7d262143b01ebcee9680f1a554085 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 4.0E-51 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G C3497_09335 d6c7d262143b01ebcee9680f1a554085 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 4.2E-30 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G C3497_09335 d6c7d262143b01ebcee9680f1a554085 260 Pfam PF00460 Flagella basal body rod protein 5 35 1.0E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 C3497_09335 d6c7d262143b01ebcee9680f1a554085 260 SUPERFAMILY SSF117143 92 222 6.02E-38 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like C3497_00155 eda456840605e0938defacf54d24d9f9 833 Gene3D G3DSA:1.10.540.10 126 238 9.3E-97 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3497_00155 eda456840605e0938defacf54d24d9f9 833 Pfam PF09317 Domain of unknown function (DUF1974) 517 804 1.7E-116 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 C3497_00155 eda456840605e0938defacf54d24d9f9 833 Gene3D G3DSA:1.20.140.10 363 510 9.3E-97 T 14-10-2018 C3497_00155 eda456840605e0938defacf54d24d9f9 833 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 129 236 4.5E-21 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3497_00155 eda456840605e0938defacf54d24d9f9 833 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 363 510 5.0E-12 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3497_00155 eda456840605e0938defacf54d24d9f9 833 SUPERFAMILY SSF56645 124 358 1.57E-46 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3497_00155 eda456840605e0938defacf54d24d9f9 833 Gene3D G3DSA:2.40.110.10 239 362 9.3E-97 T 14-10-2018 C3497_00155 eda456840605e0938defacf54d24d9f9 833 SUPERFAMILY SSF47203 363 510 6.77E-23 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3497_04695 05c1d69498e01b3656e4535a173c32d0 630 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 58 8.4E-23 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 C3497_04695 05c1d69498e01b3656e4535a173c32d0 630 Gene3D G3DSA:3.30.300.30 498 630 4.0E-27 T 14-10-2018 C3497_04695 05c1d69498e01b3656e4535a173c32d0 630 Pfam PF13193 AMP-binding enzyme C-terminal domain 511 594 3.9E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3497_04695 05c1d69498e01b3656e4535a173c32d0 630 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 3 628 0.0 T 14-10-2018 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 C3497_04695 05c1d69498e01b3656e4535a173c32d0 630 Gene3D G3DSA:3.40.50.12780 35 495 8.3E-96 T 14-10-2018 C3497_04695 05c1d69498e01b3656e4535a173c32d0 630 Pfam PF00501 AMP-binding enzyme 60 502 9.9E-75 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3497_04695 05c1d69498e01b3656e4535a173c32d0 630 ProSitePatterns PS00455 Putative AMP-binding domain signature. 239 250 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3497_04695 05c1d69498e01b3656e4535a173c32d0 630 SUPERFAMILY SSF56801 3 627 1.57E-155 T 14-10-2018 C3497_09470 41587db3458497a375c464941244d923 126 Gene3D G3DSA:1.10.1660.10 17 126 1.8E-20 T 14-10-2018 C3497_09470 41587db3458497a375c464941244d923 126 SMART SM00422 22 92 3.8E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_09470 41587db3458497a375c464941244d923 126 SUPERFAMILY SSF46955 20 123 5.49E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3497_09470 41587db3458497a375c464941244d923 126 Pfam PF13411 MerR HTH family regulatory protein 22 89 1.9E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_13690 755dff05f5eb2a65a958d4d57c4a500f 506 Gene3D G3DSA:3.40.1020.10 331 506 3.0E-75 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C3497_13690 755dff05f5eb2a65a958d4d57c4a500f 506 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 7 505 7.5E-258 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C3497_13690 755dff05f5eb2a65a958d4d57c4a500f 506 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 45 58 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 C3497_13690 755dff05f5eb2a65a958d4d57c4a500f 506 SUPERFAMILY SSF55021 412 505 1.56E-28 T 14-10-2018 C3497_13690 755dff05f5eb2a65a958d4d57c4a500f 506 SUPERFAMILY SSF53686 6 358 9.3E-107 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3497_13690 755dff05f5eb2a65a958d4d57c4a500f 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 419 505 2.0E-23 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C3497_13690 755dff05f5eb2a65a958d4d57c4a500f 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 322 411 4.6E-27 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C3497_13690 755dff05f5eb2a65a958d4d57c4a500f 506 Gene3D G3DSA:3.40.50.1100 17 320 1.9E-144 T 14-10-2018 C3497_13690 755dff05f5eb2a65a958d4d57c4a500f 506 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 309 2.5E-80 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3497_13690 755dff05f5eb2a65a958d4d57c4a500f 506 Gene3D G3DSA:3.40.50.1100 53 149 1.9E-144 T 14-10-2018 C3497_05745 35b533259976a7957bd2d685771d9f22 449 Pfam PF12626 Polymerase A arginine-rich C-terminus 318 436 8.3E-39 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain C3497_05745 35b533259976a7957bd2d685771d9f22 449 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 18 438 35.907 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 C3497_05745 35b533259976a7957bd2d685771d9f22 449 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 442 1.8E-150 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 C3497_05745 35b533259976a7957bd2d685771d9f22 449 Gene3D G3DSA:3.30.460.10 21 173 8.4E-58 T 14-10-2018 C3497_05745 35b533259976a7957bd2d685771d9f22 449 Pfam PF01743 Poly A polymerase head domain 54 177 1.7E-36 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C3497_05745 35b533259976a7957bd2d685771d9f22 449 Gene3D G3DSA:1.10.3090.10 175 419 7.0E-79 T 14-10-2018 C3497_05745 35b533259976a7957bd2d685771d9f22 449 SUPERFAMILY SSF81891 175 408 1.96E-50 T 14-10-2018 C3497_05745 35b533259976a7957bd2d685771d9f22 449 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 204 265 7.1E-20 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C3497_05745 35b533259976a7957bd2d685771d9f22 449 SUPERFAMILY SSF81301 26 174 1.42E-41 T 14-10-2018 C3497_00905 e18c6dca98a5444b2b7a6e397fe4c575 116 Gene3D G3DSA:3.30.70.120 1 108 8.0E-41 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C3497_00905 e18c6dca98a5444b2b7a6e397fe4c575 116 Pfam PF03091 CutA1 divalent ion tolerance protein 8 104 1.5E-37 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 C3497_00905 e18c6dca98a5444b2b7a6e397fe4c575 116 SUPERFAMILY SSF54913 4 107 1.82E-38 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C3497_00210 49fba6578a5a13bf9382dace7ad0f56a 263 PIRSF PIRSF009437 1 262 2.3E-99 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 C3497_00210 49fba6578a5a13bf9382dace7ad0f56a 263 Pfam PF04205 FMN-binding domain 147 245 3.9E-14 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 C3497_00210 49fba6578a5a13bf9382dace7ad0f56a 263 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 262 34.91 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 C3497_00210 49fba6578a5a13bf9382dace7ad0f56a 263 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 256 1.2E-87 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 C3497_00210 49fba6578a5a13bf9382dace7ad0f56a 263 SMART SM00900 147 248 2.2E-30 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 C3497_04400 e83a697b6e145309783a3dc835f8b2d2 201 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 161 3.4E-43 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04400 e83a697b6e145309783a3dc835f8b2d2 201 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 14-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04400 e83a697b6e145309783a3dc835f8b2d2 201 Gene3D G3DSA:3.30.460.80 1 140 9.2E-45 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04400 e83a697b6e145309783a3dc835f8b2d2 201 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 148 8.0E-17 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04400 e83a697b6e145309783a3dc835f8b2d2 201 SUPERFAMILY SSF143243 9 183 4.97E-56 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04400 e83a697b6e145309783a3dc835f8b2d2 201 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 168 34.203 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04400 e83a697b6e145309783a3dc835f8b2d2 201 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 31 159 1.0E-40 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 456 617 5.1E-45 T 14-10-2018 IPR000160 GGDEF domain C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 Pfam PF00990 Diguanylate cyclase, GGDEF domain 458 614 6.8E-55 T 14-10-2018 IPR000160 GGDEF domain C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 SUPERFAMILY SSF141868 635 879 1.44E-92 T 14-10-2018 IPR035919 EAL domain superfamily C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 SMART SM00091 333 400 1.6E-6 T 14-10-2018 IPR000014 PAS domain C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 SMART SM00086 405 447 3.7E-7 T 14-10-2018 IPR001610 PAC motif C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 332 453 3.1E-16 T 14-10-2018 IPR000014 PAS domain C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 Gene3D G3DSA:3.30.70.270 457 631 3.6E-67 T 14-10-2018 C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 SMART SM00267 447 619 9.8E-73 T 14-10-2018 IPR000160 GGDEF domain C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 SMART SM00052 629 874 1.4E-120 T 14-10-2018 IPR001633 EAL domain C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 PIRSF PIRSF005925 445 886 4.6E-147 T 14-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 PIRSF PIRSF005925 324 452 4.3E-8 T 14-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 SUPERFAMILY SSF55785 344 456 2.23E-24 T 14-10-2018 IPR035965 PAS domain superfamily C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 Gene3D G3DSA:3.30.450.20 333 456 6.7E-28 T 14-10-2018 C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 Gene3D G3DSA:3.20.20.450 632 883 1.3E-103 T 14-10-2018 IPR035919 EAL domain superfamily C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 Pfam PF00563 EAL domain 637 868 2.2E-78 T 14-10-2018 IPR001633 EAL domain C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 Pfam PF13426 PAS domain 344 446 1.4E-14 T 14-10-2018 IPR000014 PAS domain C3497_03720 1a72ed44f46ef29e28ee417472b87572 886 SUPERFAMILY SSF55073 463 620 3.66E-54 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_01690 01ac6a44cadd53dd71758efbd6b07e90 654 Gene3D G3DSA:3.40.50.12780 304 473 9.2E-36 T 14-10-2018 C3497_01690 01ac6a44cadd53dd71758efbd6b07e90 654 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3497_01690 01ac6a44cadd53dd71758efbd6b07e90 654 Pfam PF00501 AMP-binding enzyme 19 477 1.0E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3497_01690 01ac6a44cadd53dd71758efbd6b07e90 654 SUPERFAMILY SSF56801 11 611 9.42E-110 T 14-10-2018 C3497_01690 01ac6a44cadd53dd71758efbd6b07e90 654 Gene3D G3DSA:3.40.50.12780 6 303 1.1E-48 T 14-10-2018 C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 Pfam PF00679 Elongation factor G C-terminus 583 670 1.8E-19 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 SMART SM00838 583 671 2.1E-9 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 Gene3D G3DSA:3.30.230.10 467 670 1.4E-69 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 SUPERFAMILY SSF54980 387 464 2.48E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 SUPERFAMILY SSF50447 245 381 1.17E-21 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 SUPERFAMILY SSF54211 462 582 1.09E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 Gene3D G3DSA:3.30.70.870 388 466 3.1E-19 T 14-10-2018 C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 Gene3D G3DSA:3.40.50.300 2 265 7.4E-52 T 14-10-2018 C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 Gene3D G3DSA:2.40.30.10 272 383 4.8E-19 T 14-10-2018 C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 Pfam PF14492 Elongation Factor G, domain II 388 459 3.1E-20 T 14-10-2018 C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 SUPERFAMILY SSF52540 6 261 1.33E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 Gene3D G3DSA:3.30.70.240 587 658 1.4E-69 T 14-10-2018 C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 SUPERFAMILY SSF54980 583 673 2.01E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 Pfam PF03764 Elongation factor G, domain IV 462 580 3.4E-37 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 Pfam PF00009 Elongation factor Tu GTP binding domain 8 260 4.9E-30 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_03395 1dbc1bad3e8fdc6768da472e6d924cc4 683 SMART SM00889 463 581 1.0E-55 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 C3497_10310 997ae1145db7227a90c12b9f45836ad3 117 Pfam PF00545 ribonuclease 31 111 4.2E-29 T 14-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 C3497_10310 997ae1145db7227a90c12b9f45836ad3 117 Gene3D G3DSA:3.10.450.30 25 116 3.6E-38 T 14-10-2018 C3497_10310 997ae1145db7227a90c12b9f45836ad3 117 SUPERFAMILY SSF53933 26 115 1.56E-35 T 14-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 C3497_01150 bf64ef1e2b52118494dd3c9d0c6f83a7 149 Gene3D G3DSA:1.10.1760.20 1 145 1.7E-8 T 14-10-2018 C3497_01150 bf64ef1e2b52118494dd3c9d0c6f83a7 149 Pfam PF07456 Heptaprenyl diphosphate synthase component I 1 141 4.4E-42 T 14-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I C3497_01150 bf64ef1e2b52118494dd3c9d0c6f83a7 149 PIRSF PIRSF027391 1 148 7.8E-28 T 14-10-2018 IPR014535 Predicted heptaprenyl diphosphate synthase, component I C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 145 165 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 10 441 60.778 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 Gene3D G3DSA:3.40.50.12160 11 129 2.3E-26 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 Pfam PF04055 Radical SAM superfamily 147 324 2.1E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 11 438 5.0E-169 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 SUPERFAMILY SSF102114 115 374 1.14E-53 T 14-10-2018 C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 Gene3D G3DSA:3.80.30.20 140 380 1.8E-72 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 439 1.1E-101 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 SMART SM00729 141 366 1.3E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 Pfam PF00919 Uncharacterized protein family UPF0004 11 102 4.1E-20 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 Gene3D G3DSA:2.40.50.140 381 443 2.4E-16 T 14-10-2018 C3497_03950 afdcdce50c1e57bfbe86dcbef2d35ba6 443 Pfam PF01938 TRAM domain 379 440 5.1E-5 T 14-10-2018 IPR002792 TRAM domain C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 Pfam PF06480 FtsH Extracellular 9 76 1.8E-8 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 SUPERFAMILY SSF140990 407 606 6.93E-77 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 Gene3D G3DSA:2.40.50.920 27 105 1.1E-7 T 14-10-2018 C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 SUPERFAMILY SSF52540 149 396 2.42E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 Gene3D G3DSA:3.40.50.300 141 327 2.6E-70 T 14-10-2018 C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 Gene3D G3DSA:1.20.58.760 407 606 2.8E-77 T 14-10-2018 C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 SMART SM00382 189 328 1.3E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 Pfam PF01434 Peptidase family M41 387 595 6.0E-82 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 596 4.2E-241 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 1.4E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 Gene3D G3DSA:1.10.8.60 328 404 5.7E-29 T 14-10-2018 C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 C3497_04260 b662ec439f25fd8c4c9f0099457be215 631 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 602 37.677 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 C3497_01640 5b5d21ca6dde4397122d9d9b41ecda96 333 Gene3D G3DSA:1.10.287.130 270 331 1.1E-21 T 14-10-2018 C3497_01640 5b5d21ca6dde4397122d9d9b41ecda96 333 Pfam PF03308 ArgK protein 30 299 1.6E-108 T 14-10-2018 C3497_01640 5b5d21ca6dde4397122d9d9b41ecda96 333 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 27 327 1.3E-105 T 14-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 C3497_01640 5b5d21ca6dde4397122d9d9b41ecda96 333 SUPERFAMILY SSF52540 17 329 3.98E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01640 5b5d21ca6dde4397122d9d9b41ecda96 333 Gene3D G3DSA:1.20.5.170 12 58 4.4E-11 T 14-10-2018 C3497_01640 5b5d21ca6dde4397122d9d9b41ecda96 333 Gene3D G3DSA:3.40.50.300 59 268 1.6E-82 T 14-10-2018 C3497_07215 78eb6abb7d59660fa7366ea6ab35921d 475 Pfam PF00817 impB/mucB/samB family 27 146 6.4E-11 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3497_07215 78eb6abb7d59660fa7366ea6ab35921d 475 SUPERFAMILY SSF56672 26 225 1.6E-31 T 14-10-2018 C3497_07215 78eb6abb7d59660fa7366ea6ab35921d 475 Gene3D G3DSA:3.30.70.270 70 223 4.0E-9 T 14-10-2018 C3497_07215 78eb6abb7d59660fa7366ea6ab35921d 475 Gene3D G3DSA:1.10.150.20 168 222 4.0E-9 T 14-10-2018 C3497_07215 78eb6abb7d59660fa7366ea6ab35921d 475 Gene3D G3DSA:2.30.40.20 33 69 4.0E-9 T 14-10-2018 C3497_11905 85b107b7deffc2ac39185d0b43bb15a7 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3497_11905 85b107b7deffc2ac39185d0b43bb15a7 340 PIRSF PIRSF006621 1 328 3.7E-106 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3497_11905 85b107b7deffc2ac39185d0b43bb15a7 340 SUPERFAMILY SSF51395 10 319 9.7E-91 T 14-10-2018 C3497_11905 85b107b7deffc2ac39185d0b43bb15a7 340 Gene3D G3DSA:1.10.1200.80 253 330 1.5E-13 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 C3497_11905 85b107b7deffc2ac39185d0b43bb15a7 340 Pfam PF01207 Dihydrouridine synthase (Dus) 14 316 1.1E-106 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3497_11905 85b107b7deffc2ac39185d0b43bb15a7 340 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 322 49.575 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 C3497_11905 85b107b7deffc2ac39185d0b43bb15a7 340 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 6 320 5.8E-123 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 C3497_11905 85b107b7deffc2ac39185d0b43bb15a7 340 Gene3D G3DSA:3.20.20.70 7 250 2.1E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 Pfam PF01494 FAD binding domain 26 365 4.2E-64 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 Gene3D G3DSA:3.40.30.120 388 554 8.0E-14 T 14-10-2018 C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 Gene3D G3DSA:3.30.70.2450 204 289 3.2E-89 T 14-10-2018 C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 Gene3D G3DSA:3.50.50.60 28 361 3.2E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 351 367 2.1E-34 T 14-10-2018 C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 333 351 2.1E-34 T 14-10-2018 C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 27 49 2.1E-34 T 14-10-2018 C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 315 2.1E-34 T 14-10-2018 C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 175 190 2.1E-34 T 14-10-2018 C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 315 331 2.1E-34 T 14-10-2018 C3497_13880 ef7d64391331fa6c043c903bdf8c8cba 555 SUPERFAMILY SSF51905 25 399 3.24E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 248 305 1.5E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 Gene3D G3DSA:1.10.150.20 242 325 8.0E-37 T 14-10-2018 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 SMART SM00662 21 230 3.2E-96 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 27 224 1.7E-22 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 SUPERFAMILY SSF56553 51 174 4.32E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 Gene3D G3DSA:3.30.1360.10 15 222 5.5E-81 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 314 35.471 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 323 8.0E-35 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 22 313 2.8E-105 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 Gene3D G3DSA:2.170.120.12 51 173 5.5E-81 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 SUPERFAMILY SSF55257 5 230 5.79E-31 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 SUPERFAMILY SSF47789 248 321 1.31E-26 T 14-10-2018 C3497_01990 2e7d0cbffabe447d6866cd72b293d72a 327 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 151 1.4E-23 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3497_06530 deea4300076bed07305c8831417cd9b0 233 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 108 115 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C3497_06530 deea4300076bed07305c8831417cd9b0 233 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 229 9.4E-68 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C3497_06530 deea4300076bed07305c8831417cd9b0 233 SUPERFAMILY SSF53448 9 229 1.28E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_06530 deea4300076bed07305c8831417cd9b0 233 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 227 1.8E-68 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C3497_06530 deea4300076bed07305c8831417cd9b0 233 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 228 41.828 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C3497_06530 deea4300076bed07305c8831417cd9b0 233 Gene3D G3DSA:3.90.550.10 3 232 8.3E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_07020 eae35bc9674788ea8f493c943b36aa65 148 Pfam PF01668 SmpB protein 3 145 1.5E-59 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C3497_07020 eae35bc9674788ea8f493c943b36aa65 148 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site C3497_07020 eae35bc9674788ea8f493c943b36aa65 148 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 145 2.4E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C3497_07020 eae35bc9674788ea8f493c943b36aa65 148 Hamap MF_00023 SsrA-binding protein [smpB]. 1 148 73.148 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C3497_07020 eae35bc9674788ea8f493c943b36aa65 148 Gene3D G3DSA:2.40.280.10 1 124 1.2E-47 T 14-10-2018 IPR023620 Small protein B C3497_07020 eae35bc9674788ea8f493c943b36aa65 148 SUPERFAMILY SSF74982 3 127 2.62E-50 T 14-10-2018 IPR023620 Small protein B C3497_07020 eae35bc9674788ea8f493c943b36aa65 148 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 6.0E-56 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C3497_09215 f49f2440774bb5f5f02b9e4017857971 262 SUPERFAMILY SSF81345 8 248 7.45E-11 T 14-10-2018 IPR037294 ABC transporter, BtuC-like C3497_09215 f49f2440774bb5f5f02b9e4017857971 262 Pfam PF00950 ABC 3 transport family 4 250 1.1E-13 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 C3497_01460 03f5a5dc3208c4fe2dd1b946d7e90c18 291 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 4.0E-160 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 C3497_01460 03f5a5dc3208c4fe2dd1b946d7e90c18 291 Pfam PF00483 Nucleotidyl transferase 2 238 9.9E-71 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C3497_01460 03f5a5dc3208c4fe2dd1b946d7e90c18 291 SUPERFAMILY SSF53448 1 286 4.51E-94 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_01460 03f5a5dc3208c4fe2dd1b946d7e90c18 291 Gene3D G3DSA:3.90.550.10 1 291 1.6E-87 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_10750 eac443648b68d268264095ebb71304ba 93 Pfam PF12728 Helix-turn-helix domain 9 57 3.1E-18 T 14-10-2018 C3497_10750 eac443648b68d268264095ebb71304ba 93 Gene3D G3DSA:1.10.1660.10 6 57 3.2E-7 T 14-10-2018 C3497_10750 eac443648b68d268264095ebb71304ba 93 SUPERFAMILY SSF46955 9 57 2.56E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3497_10750 eac443648b68d268264095ebb71304ba 93 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 9 54 9.0E-16 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 C3497_06405 7622e64badc7c405e1c9ad4a1a1dbc10 359 Pfam PF00793 DAHP synthetase I family 45 340 1.1E-87 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3497_06405 7622e64badc7c405e1c9ad4a1a1dbc10 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 348 5.0E-140 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 C3497_06405 7622e64badc7c405e1c9ad4a1a1dbc10 359 SUPERFAMILY SSF51569 8 349 4.29E-128 T 14-10-2018 C3497_06405 7622e64badc7c405e1c9ad4a1a1dbc10 359 PIRSF PIRSF001361 1 355 9.2E-154 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 C3497_06405 7622e64badc7c405e1c9ad4a1a1dbc10 359 Gene3D G3DSA:3.20.20.70 3 351 6.0E-144 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_01710 b36aa1fefffd55f44e3da00d463847a8 442 Pfam PF13458 Periplasmic binding protein 29 400 9.1E-86 T 14-10-2018 IPR028081 Leucine-binding protein domain C3497_01710 b36aa1fefffd55f44e3da00d463847a8 442 Gene3D G3DSA:3.40.50.2300 150 291 3.3E-91 T 14-10-2018 C3497_01710 b36aa1fefffd55f44e3da00d463847a8 442 Gene3D G3DSA:3.40.50.2300 39 365 3.3E-91 T 14-10-2018 C3497_01710 b36aa1fefffd55f44e3da00d463847a8 442 SUPERFAMILY SSF53822 31 406 3.34E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_14600 8518756460f6b9aad069477f4f315095 373 Pfam PF13682 Chemoreceptor zinc-binding domain 258 324 3.4E-14 T 14-10-2018 IPR025991 Chemoreceptor zinc-binding domain C3497_14600 8518756460f6b9aad069477f4f315095 373 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 118 243 4.5E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_14600 8518756460f6b9aad069477f4f315095 373 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 168 197 2.0E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_14600 8518756460f6b9aad069477f4f315095 373 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 55 84 2.0E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_14600 8518756460f6b9aad069477f4f315095 373 SMART SM00283 38 281 1.3E-24 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_14600 8518756460f6b9aad069477f4f315095 373 Gene3D G3DSA:1.10.287.950 4 248 9.8E-47 T 14-10-2018 C3497_14600 8518756460f6b9aad069477f4f315095 373 SUPERFAMILY SSF58104 13 244 2.88E-47 T 14-10-2018 C3497_00695 06549d3cb80b46174698bc33bf80ef63 235 Pfam PF01292 Prokaryotic cytochrome b561 23 229 1.6E-28 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 C3497_00695 06549d3cb80b46174698bc33bf80ef63 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 25 48 1.5E-54 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C3497_00695 06549d3cb80b46174698bc33bf80ef63 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 63 87 1.5E-54 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C3497_00695 06549d3cb80b46174698bc33bf80ef63 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 190 212 1.5E-54 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C3497_00695 06549d3cb80b46174698bc33bf80ef63 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 221 234 1.5E-54 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C3497_00695 06549d3cb80b46174698bc33bf80ef63 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 142 161 1.5E-54 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C3497_00695 06549d3cb80b46174698bc33bf80ef63 235 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 21 234 6.3E-73 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C3497_00695 06549d3cb80b46174698bc33bf80ef63 235 SUPERFAMILY SSF81342 18 233 9.42E-41 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C3497_00695 06549d3cb80b46174698bc33bf80ef63 235 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 28 45 - T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C3497_00695 06549d3cb80b46174698bc33bf80ef63 235 Gene3D G3DSA:1.20.950.20 11 219 8.8E-76 T 14-10-2018 C3497_08095 3a74c1017c7d6f937f17d9b837c04cc6 738 Gene3D G3DSA:2.40.160.50 477 690 4.1E-10 T 14-10-2018 C3497_08095 3a74c1017c7d6f937f17d9b837c04cc6 738 Gene3D G3DSA:3.10.20.310 339 409 1.1E-7 T 14-10-2018 C3497_08095 3a74c1017c7d6f937f17d9b837c04cc6 738 Gene3D G3DSA:3.40.1090.10 23 126 2.4E-26 T 14-10-2018 C3497_08095 3a74c1017c7d6f937f17d9b837c04cc6 738 Gene3D G3DSA:3.40.1090.10 152 284 1.9E-17 T 14-10-2018 C3497_08095 3a74c1017c7d6f937f17d9b837c04cc6 738 Pfam PF01103 Surface antigen 490 650 4.1E-6 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 C3497_08095 3a74c1017c7d6f937f17d9b837c04cc6 738 SUPERFAMILY SSF52151 34 314 1.6E-47 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C3497_08095 3a74c1017c7d6f937f17d9b837c04cc6 738 Pfam PF01734 Patatin-like phospholipase 36 226 2.5E-27 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 Gene3D G3DSA:1.10.287.130 256 336 2.7E-17 T 14-10-2018 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 SUPERFAMILY SSF52172 509 628 3.84E-19 T 14-10-2018 IPR011006 CheY-like superfamily C3497_01735 76e7217995066b61493171f3f17f6c5f 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 488 8.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_01735 76e7217995066b61493171f3f17f6c5f 631 SUPERFAMILY SSF47384 256 335 1.82E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 Pfam PF00072 Response regulator receiver domain 512 624 4.0E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 SMART SM00388 270 335 3.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 Gene3D G3DSA:1.20.1480.50 155 255 1.7E-5 T 14-10-2018 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 SUPERFAMILY SSF55874 324 492 1.03E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_01735 76e7217995066b61493171f3f17f6c5f 631 Gene3D G3DSA:3.30.565.10 337 491 2.2E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_01735 76e7217995066b61493171f3f17f6c5f 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 443 7.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 7.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 487 7.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 429 7.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 335 3.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 SMART SM00448 510 624 1.7E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 36 102 6.9E-9 T 14-10-2018 IPR019247 Histidine kinase BarA, N-terminal C3497_01735 76e7217995066b61493171f3f17f6c5f 631 Gene3D G3DSA:3.40.50.2300 508 631 2.3E-17 T 14-10-2018 C3497_01735 76e7217995066b61493171f3f17f6c5f 631 SMART SM00387 379 490 8.7E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_01735 76e7217995066b61493171f3f17f6c5f 631 SMART SM00304 192 244 7.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_14775 5d1f5fece1bfa1c9c3b4a51e2823b61d 85 Pfam PF13670 Peptidase propeptide and YPEB domain 4 84 1.4E-28 T 14-10-2018 IPR025711 PepSY domain C3497_14245 bd00a47ead94036829875fdeaa7096a4 142 Gene3D G3DSA:3.10.129.10 2 140 2.1E-23 T 14-10-2018 C3497_14245 bd00a47ead94036829875fdeaa7096a4 142 Pfam PF13279 Thioesterase-like superfamily 24 138 8.5E-15 T 14-10-2018 C3497_14245 bd00a47ead94036829875fdeaa7096a4 142 SUPERFAMILY SSF54637 1 137 2.51E-24 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_04805 c5aa0b4bf7a21f1fd9e1f9974ede0006 253 SMART SM00332 1 243 1.5E-16 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_04805 c5aa0b4bf7a21f1fd9e1f9974ede0006 253 SUPERFAMILY SSF81606 4 245 5.75E-51 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_04805 c5aa0b4bf7a21f1fd9e1f9974ede0006 253 Gene3D G3DSA:3.60.40.10 1 247 2.7E-53 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_04805 c5aa0b4bf7a21f1fd9e1f9974ede0006 253 SMART SM00331 21 245 1.7E-27 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_04805 c5aa0b4bf7a21f1fd9e1f9974ede0006 253 Pfam PF13672 Protein phosphatase 2C 11 206 8.6E-11 T 14-10-2018 C3497_07950 026fe122ec1e8397961abd94996ed5b5 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 8.9E-86 T 14-10-2018 C3497_07950 026fe122ec1e8397961abd94996ed5b5 263 PIRSF PIRSF000094 1 260 2.5E-115 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3497_07950 026fe122ec1e8397961abd94996ed5b5 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 4.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_07950 026fe122ec1e8397961abd94996ed5b5 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 4.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_07950 026fe122ec1e8397961abd94996ed5b5 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 4.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_07950 026fe122ec1e8397961abd94996ed5b5 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 4.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_07950 026fe122ec1e8397961abd94996ed5b5 263 Gene3D G3DSA:3.40.50.720 2 259 1.2E-57 T 14-10-2018 C3497_07950 026fe122ec1e8397961abd94996ed5b5 263 SUPERFAMILY SSF51735 6 253 3.05E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_00150 30335ff9ca60525b08b4d3d0cc57e905 232 SUPERFAMILY SSF48498 88 217 2.0E-39 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C3497_00150 30335ff9ca60525b08b4d3d0cc57e905 232 Gene3D G3DSA:1.10.357.10 14 216 6.4E-70 T 14-10-2018 C3497_00150 30335ff9ca60525b08b4d3d0cc57e905 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.9E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_00150 30335ff9ca60525b08b4d3d0cc57e905 232 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site C3497_00150 30335ff9ca60525b08b4d3d0cc57e905 232 SUPERFAMILY SSF46689 3 80 1.49E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_00150 30335ff9ca60525b08b4d3d0cc57e905 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_00150 30335ff9ca60525b08b4d3d0cc57e905 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_06635 9f23ec3e4ce48a68eddddf74c5a99ef5 379 SUPERFAMILY SSF52540 49 165 4.61E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06635 9f23ec3e4ce48a68eddddf74c5a99ef5 379 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 4 331 38.813 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 C3497_06635 9f23ec3e4ce48a68eddddf74c5a99ef5 379 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 22 318 6.4E-71 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 C3497_06635 9f23ec3e4ce48a68eddddf74c5a99ef5 379 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 16 329 7.4E-104 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 C3497_09700 0cad77d4f1e46f5de65a3a3b4cfdd9a6 153 Pfam PF11149 Protein of unknown function (DUF2924) 11 146 5.9E-45 T 14-10-2018 IPR021322 Protein of unknown function DUF2924 C3497_10135 90238e9eb668205a8bde0008f9eb2014 137 SUPERFAMILY SSF54523 7 107 4.08E-14 T 14-10-2018 C3497_10135 90238e9eb668205a8bde0008f9eb2014 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10135 90238e9eb668205a8bde0008f9eb2014 137 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10135 90238e9eb668205a8bde0008f9eb2014 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 8.7E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10135 90238e9eb668205a8bde0008f9eb2014 137 Gene3D G3DSA:3.30.700.10 7 137 3.1E-16 T 14-10-2018 C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 SMART SM00564 510 541 9.1E-4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 SMART SM00564 458 500 44.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 SMART SM00564 189 226 7.3 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 SMART SM00564 94 126 3.0E-6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 SMART SM00564 144 175 1.6E-4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 SMART SM00564 293 320 100.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 Gene3D G3DSA:2.140.10.10 32 599 3.9E-213 T 14-10-2018 C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 SUPERFAMILY SSF50998 48 592 7.06E-157 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 31 569 1.2E-239 T 14-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 268 289 - T 14-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 Pfam PF13360 PQQ-like domain 79 317 5.6E-17 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C3497_07800 33d4bc98c1f78f0a38a480120bbd7b8b 599 Pfam PF01011 PQQ enzyme repeat 516 551 1.7E-8 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C3497_02395 e6a3a09be3aa4a1a559661f466ebbe1b 346 Pfam PF13592 Winged helix-turn helix 99 157 1.2E-18 T 14-10-2018 IPR025959 Winged helix-turn helix domain C3497_02395 e6a3a09be3aa4a1a559661f466ebbe1b 346 Pfam PF13358 DDE superfamily endonuclease 173 311 4.0E-33 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain C3497_02395 e6a3a09be3aa4a1a559661f466ebbe1b 346 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 17 62 1.8E-6 T 14-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 C3497_02395 e6a3a09be3aa4a1a559661f466ebbe1b 346 SUPERFAMILY SSF46689 15 133 7.17E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_02395 e6a3a09be3aa4a1a559661f466ebbe1b 346 Gene3D G3DSA:3.30.420.470 141 342 2.0E-16 T 14-10-2018 C3497_00245 68039af0ba77ceb0e9da8a4834a18158 73 Pfam PF10975 Protein of unknown function (DUF2802) 2 63 1.3E-15 T 14-10-2018 IPR021244 Protein of unknown function DUF2802 C3497_06840 f146fdaf434b29f2398644ace1fbbb60 167 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 63 70 - T 14-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 C3497_06840 f146fdaf434b29f2398644ace1fbbb60 167 Pfam PF00255 Glutathione peroxidase 7 113 1.4E-40 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3497_06840 f146fdaf434b29f2398644ace1fbbb60 167 ProSitePatterns PS00460 Glutathione peroxidases active site. 27 42 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 C3497_06840 f146fdaf434b29f2398644ace1fbbb60 167 PRINTS PR01011 Glutathione peroxidase family signature 60 76 1.0E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3497_06840 f146fdaf434b29f2398644ace1fbbb60 167 PRINTS PR01011 Glutathione peroxidase family signature 126 135 1.0E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3497_06840 f146fdaf434b29f2398644ace1fbbb60 167 PRINTS PR01011 Glutathione peroxidase family signature 25 42 1.0E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3497_06840 f146fdaf434b29f2398644ace1fbbb60 167 SUPERFAMILY SSF52833 6 162 2.68E-61 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_06840 f146fdaf434b29f2398644ace1fbbb60 167 Gene3D G3DSA:3.40.30.10 1 166 1.3E-67 T 14-10-2018 C3497_06840 f146fdaf434b29f2398644ace1fbbb60 167 PIRSF PIRSF000303 1 165 9.3E-64 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3497_14015 3e43268c16a6686aa172cc126594951f 342 SMART SM00062 37 265 5.5E-54 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF C3497_14015 3e43268c16a6686aa172cc126594951f 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 250 2.8E-32 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF C3497_14015 3e43268c16a6686aa172cc126594951f 342 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 60 73 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site C3497_14015 3e43268c16a6686aa172cc126594951f 342 Gene3D G3DSA:3.40.190.10 129 224 2.1E-54 T 14-10-2018 C3497_14015 3e43268c16a6686aa172cc126594951f 342 Gene3D G3DSA:3.40.190.10 27 252 2.1E-54 T 14-10-2018 C3497_14015 3e43268c16a6686aa172cc126594951f 342 SUPERFAMILY SSF53850 28 257 4.46E-50 T 14-10-2018 C3497_03165 a6ef59188020b1673bf557a5d9566154 528 Pfam PF12860 PAS fold 105 213 3.1E-18 T 14-10-2018 C3497_03165 a6ef59188020b1673bf557a5d9566154 528 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 516 1.6E-45 T 14-10-2018 IPR000160 GGDEF domain C3497_03165 a6ef59188020b1673bf557a5d9566154 528 SMART SM00267 352 520 7.2E-63 T 14-10-2018 IPR000160 GGDEF domain C3497_03165 a6ef59188020b1673bf557a5d9566154 528 SUPERFAMILY SSF55073 368 520 1.18E-47 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_03165 a6ef59188020b1673bf557a5d9566154 528 SUPERFAMILY SSF55785 205 329 1.13E-21 T 14-10-2018 IPR035965 PAS domain superfamily C3497_03165 a6ef59188020b1673bf557a5d9566154 528 Gene3D G3DSA:3.30.70.270 348 520 1.1E-56 T 14-10-2018 C3497_03165 a6ef59188020b1673bf557a5d9566154 528 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 216 338 1.7E-17 T 14-10-2018 IPR000014 PAS domain C3497_03165 a6ef59188020b1673bf557a5d9566154 528 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 95 215 9.1E-7 T 14-10-2018 IPR000014 PAS domain C3497_03165 a6ef59188020b1673bf557a5d9566154 528 SUPERFAMILY SSF55785 87 192 9.77E-10 T 14-10-2018 IPR035965 PAS domain superfamily C3497_03165 a6ef59188020b1673bf557a5d9566154 528 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 519 1.7E-50 T 14-10-2018 IPR000160 GGDEF domain C3497_03165 a6ef59188020b1673bf557a5d9566154 528 Pfam PF00989 PAS fold 221 327 2.4E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3497_03165 a6ef59188020b1673bf557a5d9566154 528 SMART SM00091 220 288 6.9E-8 T 14-10-2018 IPR000014 PAS domain C3497_03165 a6ef59188020b1673bf557a5d9566154 528 SMART SM00091 98 166 0.0011 T 14-10-2018 IPR000014 PAS domain C3497_03165 a6ef59188020b1673bf557a5d9566154 528 Gene3D G3DSA:3.30.450.20 85 212 2.0E-11 T 14-10-2018 C3497_03165 a6ef59188020b1673bf557a5d9566154 528 Gene3D G3DSA:3.30.450.20 213 337 7.5E-22 T 14-10-2018 C3497_03040 b7b63cc6f93556857d304f3f9367f4f6 170 Gene3D G3DSA:1.10.10.10 79 162 3.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_03040 b7b63cc6f93556857d304f3f9367f4f6 170 SUPERFAMILY SSF53155 8 86 1.43E-17 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 C3497_03040 b7b63cc6f93556857d304f3f9367f4f6 170 SUPERFAMILY SSF46767 81 161 2.22E-25 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 C3497_03040 b7b63cc6f93556857d304f3f9367f4f6 170 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 7 77 1.3E-6 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 C3497_03040 b7b63cc6f93556857d304f3f9367f4f6 170 Gene3D G3DSA:3.30.160.70 8 76 4.9E-16 T 14-10-2018 C3497_03040 b7b63cc6f93556857d304f3f9367f4f6 170 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 82 160 2.5E-27 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 C3497_03040 b7b63cc6f93556857d304f3f9367f4f6 170 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 81 160 1.5E-28 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 C3497_03040 b7b63cc6f93556857d304f3f9367f4f6 170 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 131 137 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 C3497_04455 a189cb1d70beabaaeee1b14875a1e3fa 489 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 13 476 2.4E-137 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 C3497_04455 a189cb1d70beabaaeee1b14875a1e3fa 489 Pfam PF00361 Proton-conducting membrane transporter 124 427 3.5E-74 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04455 a189cb1d70beabaaeee1b14875a1e3fa 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 215 236 1.7E-5 T 14-10-2018 C3497_04455 a189cb1d70beabaaeee1b14875a1e3fa 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 1.7E-5 T 14-10-2018 C3497_04455 a189cb1d70beabaaeee1b14875a1e3fa 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 307 319 1.7E-5 T 14-10-2018 C3497_04455 a189cb1d70beabaaeee1b14875a1e3fa 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 72 97 1.7E-5 T 14-10-2018 C3497_04455 a189cb1d70beabaaeee1b14875a1e3fa 489 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 477 18.43 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 C3497_01715 46dd73ea3fa3bccdd3ea3787c37c5c24 278 Pfam PF00005 ABC transporter 32 183 8.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_01715 46dd73ea3fa3bccdd3ea3787c37c5c24 278 SMART SM00382 41 233 2.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_01715 46dd73ea3fa3bccdd3ea3787c37c5c24 278 SUPERFAMILY SSF52540 14 254 8.38E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01715 46dd73ea3fa3bccdd3ea3787c37c5c24 278 Gene3D G3DSA:3.40.50.300 12 257 9.5E-53 T 14-10-2018 C3497_02520 954eee3300efce82b33ed7bc3611228c 397 Gene3D G3DSA:1.10.150.130 88 201 1.2E-25 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3497_02520 954eee3300efce82b33ed7bc3611228c 397 Gene3D G3DSA:3.30.160.390 1 87 3.8E-30 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily C3497_02520 954eee3300efce82b33ed7bc3611228c 397 Pfam PF13356 Arm DNA-binding domain 2 85 4.3E-21 T 14-10-2018 IPR025166 Integrase, DNA-binding domain C3497_02520 954eee3300efce82b33ed7bc3611228c 397 Gene3D G3DSA:1.10.443.10 202 379 3.4E-21 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3497_02520 954eee3300efce82b33ed7bc3611228c 397 SUPERFAMILY SSF56349 97 377 1.12E-56 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3497_02520 954eee3300efce82b33ed7bc3611228c 397 Pfam PF00589 Phage integrase family 204 367 3.5E-23 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3497_09070 6ac33459b51da8132e114f8b3efceb4c 359 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 142 2.6E-68 T 14-10-2018 C3497_09070 6ac33459b51da8132e114f8b3efceb4c 359 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 160 275 9.4E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C3497_09070 6ac33459b51da8132e114f8b3efceb4c 359 PIRSF PIRSF009283 1 355 1.2E-112 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 C3497_09070 6ac33459b51da8132e114f8b3efceb4c 359 Gene3D G3DSA:3.10.180.10 2 154 2.1E-52 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3497_09070 6ac33459b51da8132e114f8b3efceb4c 359 Gene3D G3DSA:3.10.180.10 155 356 2.3E-67 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3497_09070 6ac33459b51da8132e114f8b3efceb4c 359 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 3.1E-118 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 C3497_09070 6ac33459b51da8132e114f8b3efceb4c 359 SUPERFAMILY SSF54593 5 342 2.37E-83 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3497_11930 264d92b33900c8b54180b9f547e9b429 403 SUPERFAMILY SSF48452 299 391 1.08E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_11930 264d92b33900c8b54180b9f547e9b429 403 Pfam PF07219 HemY protein N-terminus 26 131 9.5E-31 T 14-10-2018 IPR010817 HemY, N-terminal C3497_11930 264d92b33900c8b54180b9f547e9b429 403 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 385 1.9E-107 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 C3497_13835 3c496dba27071c39da48be0fb297a051 253 SUPERFAMILY SSF53790 14 250 1.7E-44 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3497_13835 3c496dba27071c39da48be0fb297a051 253 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 16 247 4.1E-63 T 14-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 C3497_13835 3c496dba27071c39da48be0fb297a051 253 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 114 146 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_13835 3c496dba27071c39da48be0fb297a051 253 Gene3D G3DSA:3.30.950.10 149 251 5.3E-13 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3497_13835 3c496dba27071c39da48be0fb297a051 253 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 234 1.2E-38 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3497_13835 3c496dba27071c39da48be0fb297a051 253 Gene3D G3DSA:3.40.1010.10 14 148 7.9E-23 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3497_13835 3c496dba27071c39da48be0fb297a051 253 PIRSF PIRSF036427 14 252 6.3E-59 T 14-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 C3497_02645 aa5af5b7918397bb576c932128ef218f 310 Gene3D G3DSA:1.20.1640.10 99 307 2.8E-10 T 14-10-2018 C3497_02645 aa5af5b7918397bb576c932128ef218f 310 Pfam PF07549 SecD/SecF GG Motif 32 55 1.2E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site C3497_02645 aa5af5b7918397bb576c932128ef218f 310 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 122 281 2.1E-45 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3497_02645 aa5af5b7918397bb576c932128ef218f 310 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 284 1.9E-72 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 C3497_02645 aa5af5b7918397bb576c932128ef218f 310 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 295 28.655 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 C3497_02645 aa5af5b7918397bb576c932128ef218f 310 Pfam PF02355 Protein export membrane protein 116 292 2.3E-61 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial C3497_02645 aa5af5b7918397bb576c932128ef218f 310 SUPERFAMILY SSF82866 72 292 1.31E-36 T 14-10-2018 C3497_02645 aa5af5b7918397bb576c932128ef218f 310 PRINTS PR01755 Bacterial translocase SecF protein signature 232 247 2.2E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3497_02645 aa5af5b7918397bb576c932128ef218f 310 PRINTS PR01755 Bacterial translocase SecF protein signature 152 166 2.2E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3497_02645 aa5af5b7918397bb576c932128ef218f 310 PRINTS PR01755 Bacterial translocase SecF protein signature 200 218 2.2E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3497_02645 aa5af5b7918397bb576c932128ef218f 310 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 2.2E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3497_01575 cee1024ccd2a59a5b17a92033d5efc80 397 SUPERFAMILY SSF89796 4 396 2.35E-148 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily C3497_01575 cee1024ccd2a59a5b17a92033d5efc80 397 Gene3D G3DSA:3.30.1540.10 231 322 1.0E-149 T 14-10-2018 C3497_01575 cee1024ccd2a59a5b17a92033d5efc80 397 Gene3D G3DSA:3.40.50.10540 6 355 1.0E-149 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily C3497_01575 cee1024ccd2a59a5b17a92033d5efc80 397 Pfam PF02515 CoA-transferase family III 6 372 6.8E-138 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 C3497_01090 b3a3f3f8787b757ec037fe44ddb36fec 200 PIRSF PIRSF006386 1 199 2.8E-56 T 14-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 C3497_01090 b3a3f3f8787b757ec037fe44ddb36fec 200 SUPERFAMILY SSF52833 5 197 3.58E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_01090 b3a3f3f8787b757ec037fe44ddb36fec 200 Gene3D G3DSA:3.40.30.10 4 198 3.9E-59 T 14-10-2018 C3497_01090 b3a3f3f8787b757ec037fe44ddb36fec 200 Pfam PF01323 DSBA-like thioredoxin domain 5 195 2.2E-42 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 C3497_12985 d35e258de21453a1e7dae8bab2975004 759 Gene3D G3DSA:2.60.120.260 37 168 3.6E-28 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily C3497_12985 d35e258de21453a1e7dae8bab2975004 759 Gene3D G3DSA:2.60.120.260 342 484 4.8E-33 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily C3497_12985 d35e258de21453a1e7dae8bab2975004 759 Pfam PF03170 Bacterial cellulose synthase subunit 39 581 1.3E-83 T 14-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 C3497_12985 d35e258de21453a1e7dae8bab2975004 759 PRINTS PR01440 Cellulose synthase subunit B signature 292 313 1.1E-5 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 C3497_12985 d35e258de21453a1e7dae8bab2975004 759 PRINTS PR01440 Cellulose synthase subunit B signature 491 510 1.1E-5 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 SUPERFAMILY SSF54909 68 157 9.52E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 SUPERFAMILY SSF46785 6 66 6.83E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 Gene3D G3DSA:1.10.10.10 2 60 2.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 1.7E-20 T 14-10-2018 C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 Gene3D G3DSA:3.30.70.920 61 145 3.6E-27 T 14-10-2018 C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 Pfam PF01037 Lrp/AsnC ligand binding domain 73 147 7.9E-24 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 SMART SM00344 7 117 5.7E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_13340 16e0ce8adf5cd9955191b3661eff4d9b 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_02365 3260daf69ca88d35734c1cb4a0bfc61e 249 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 238 6.1E-17 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase C3497_02365 3260daf69ca88d35734c1cb4a0bfc61e 249 Gene3D G3DSA:3.60.10.10 2 248 1.4E-42 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3497_02365 3260daf69ca88d35734c1cb4a0bfc61e 249 SUPERFAMILY SSF56219 1 245 5.76E-46 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3497_04120 6f12f75dd9e048ff5c096c40f75d3c2d 511 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 45.52 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 C3497_04120 6f12f75dd9e048ff5c096c40f75d3c2d 511 SUPERFAMILY SSF56235 2 259 3.43E-68 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_04120 6f12f75dd9e048ff5c096c40f75d3c2d 511 Gene3D G3DSA:3.60.20.10 2 414 1.2E-153 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_04120 6f12f75dd9e048ff5c096c40f75d3c2d 511 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 2.0E-161 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 C3497_04120 6f12f75dd9e048ff5c096c40f75d3c2d 511 Pfam PF00156 Phosphoribosyl transferase domain 283 395 7.6E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3497_04120 6f12f75dd9e048ff5c096c40f75d3c2d 511 PIRSF PIRSF000485 1 483 7.5E-161 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 C3497_04120 6f12f75dd9e048ff5c096c40f75d3c2d 511 SUPERFAMILY SSF53271 252 483 2.23E-70 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3497_04120 6f12f75dd9e048ff5c096c40f75d3c2d 511 Gene3D G3DSA:3.40.50.2020 279 443 1.2E-153 T 14-10-2018 C3497_04120 6f12f75dd9e048ff5c096c40f75d3c2d 511 Pfam PF13522 Glutamine amidotransferase domain 65 210 7.4E-16 T 14-10-2018 C3497_00435 42aefa415e6ce0c885bc9818214a67a0 145 Gene3D G3DSA:3.30.530.20 1 144 1.8E-27 T 14-10-2018 IPR023393 START-like domain superfamily C3497_00435 42aefa415e6ce0c885bc9818214a67a0 145 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 3 137 1.4E-12 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase C3497_00435 42aefa415e6ce0c885bc9818214a67a0 145 SUPERFAMILY SSF55961 4 143 5.5E-24 T 14-10-2018 C3497_02055 c2d300348423d06390d0ebe0106e5f10 321 Gene3D G3DSA:3.60.15.10 8 268 2.9E-62 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_02055 c2d300348423d06390d0ebe0106e5f10 321 Pfam PF00753 Metallo-beta-lactamase superfamily 26 203 1.7E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_02055 c2d300348423d06390d0ebe0106e5f10 321 SMART SM00849 23 228 4.8E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_02055 c2d300348423d06390d0ebe0106e5f10 321 SUPERFAMILY SSF56281 8 261 1.14E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_00185 cdcec68be7e2ce798cacf2aff590d366 793 Gene3D G3DSA:3.40.50.720 3 194 7.1E-57 T 14-10-2018 C3497_00185 cdcec68be7e2ce798cacf2aff590d366 793 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 194 293 1.0E-8 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3497_00185 cdcec68be7e2ce798cacf2aff590d366 793 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 191 5.7E-45 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3497_00185 cdcec68be7e2ce798cacf2aff590d366 793 Gene3D G3DSA:1.10.1040.10 195 309 1.3E-15 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C3497_00185 cdcec68be7e2ce798cacf2aff590d366 793 SUPERFAMILY SSF48179 192 311 5.1E-20 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_00185 cdcec68be7e2ce798cacf2aff590d366 793 SUPERFAMILY SSF51735 5 192 1.83E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_00185 cdcec68be7e2ce798cacf2aff590d366 793 SUPERFAMILY SSF48179 344 456 1.11E-16 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_00185 cdcec68be7e2ce798cacf2aff590d366 793 SUPERFAMILY SSF52096 485 790 9.12E-37 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_00185 cdcec68be7e2ce798cacf2aff590d366 793 Gene3D G3DSA:3.90.226.10 481 692 3.7E-27 T 14-10-2018 C3497_00185 cdcec68be7e2ce798cacf2aff590d366 793 Pfam PF00378 Enoyl-CoA hydratase/isomerase 497 623 4.5E-16 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 61 3.0E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 Pfam PF01568 Molydopterin dinucleotide binding domain 575 684 4.5E-23 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 Gene3D G3DSA:3.40.50.740 75 479 7.4E-145 T 14-10-2018 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 SUPERFAMILY SSF53706 8 576 2.49E-163 T 14-10-2018 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 SMART SM00926 6 61 5.7E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 Gene3D G3DSA:2.20.25.90 1 65 2.3E-10 T 14-10-2018 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 419 436 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 Gene3D G3DSA:2.40.40.20 549 691 3.9E-32 T 14-10-2018 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 Pfam PF00384 Molybdopterin oxidoreductase 64 474 1.7E-56 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 Gene3D G3DSA:3.40.228.10 141 545 7.4E-145 T 14-10-2018 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 Gene3D G3DSA:3.30.2070.10 434 520 7.4E-145 T 14-10-2018 C3497_13945 afce7ee3e2cc00c2d486d96daf6e27ae 691 SUPERFAMILY SSF50692 529 691 1.33E-36 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily C3497_08500 e877c57c14bef878d4841864330b42f8 331 Gene3D G3DSA:1.10.443.10 107 320 7.9E-67 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3497_08500 e877c57c14bef878d4841864330b42f8 331 Gene3D G3DSA:1.10.150.130 15 101 1.5E-35 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3497_08500 e877c57c14bef878d4841864330b42f8 331 Pfam PF00589 Phage integrase family 117 317 8.5E-46 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3497_08500 e877c57c14bef878d4841864330b42f8 331 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 100 1.1E-27 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 C3497_08500 e877c57c14bef878d4841864330b42f8 331 SUPERFAMILY SSF56349 17 317 1.94E-50 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3497_08500 e877c57c14bef878d4841864330b42f8 331 TIGRFAM TIGR02249 integrase_gron: integron integrase 17 331 5.1E-151 T 14-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 C3497_07015 0c40551b3920006b8fa669c5bb77ef8b 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 8.9E-27 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 C3497_07015 0c40551b3920006b8fa669c5bb77ef8b 145 SUPERFAMILY SSF55961 1 142 5.73E-31 T 14-10-2018 C3497_07015 0c40551b3920006b8fa669c5bb77ef8b 145 Gene3D G3DSA:3.30.530.20 3 143 9.7E-33 T 14-10-2018 IPR023393 START-like domain superfamily C3497_13890 cc46991afeab4a231ce435bcef034fb5 181 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 134 1.2E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C3497_13890 cc46991afeab4a231ce435bcef034fb5 181 Gene3D G3DSA:3.10.180.10 1 163 6.3E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3497_13890 cc46991afeab4a231ce435bcef034fb5 181 SUPERFAMILY SSF54593 3 157 4.03E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3497_03955 3dad60602eef0be873ff75ec60e8a11c 306 Pfam PF01734 Patatin-like phospholipase 19 174 2.2E-22 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 C3497_03955 3dad60602eef0be873ff75ec60e8a11c 306 Gene3D G3DSA:3.40.1090.10 107 204 1.4E-15 T 14-10-2018 C3497_03955 3dad60602eef0be873ff75ec60e8a11c 306 Gene3D G3DSA:3.40.1090.10 1 106 3.2E-27 T 14-10-2018 C3497_03955 3dad60602eef0be873ff75ec60e8a11c 306 SUPERFAMILY SSF52151 13 289 2.62E-58 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 ProSitePatterns PS00211 ABC transporters family signature. 827 841 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 922 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 SUPERFAMILY SSF52540 619 907 6.62E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 Gene3D G3DSA:3.30.190.20 131 243 1.2E-242 T 14-10-2018 C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 SUPERFAMILY SSF52540 3 568 4.18E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 Gene3D G3DSA:1.20.1580.10 90 491 1.2E-242 T 14-10-2018 C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 Gene3D G3DSA:3.40.50.300 615 933 2.8E-138 T 14-10-2018 C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 Gene3D G3DSA:3.40.50.300 6 594 1.2E-242 T 14-10-2018 C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 937 22.493 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 Gene3D G3DSA:1.20.1580.10 689 827 2.8E-138 T 14-10-2018 C3497_02015 a3e664af2c674b4a1b08d175efc475bd 944 Gene3D G3DSA:1.10.8.280 286 402 1.2E-242 T 14-10-2018 C3497_11590 4c14db53b76d9768274c1051541c26da 121 Gene3D G3DSA:1.10.10.2830 37 119 8.4E-7 T 14-10-2018 C3497_11590 4c14db53b76d9768274c1051541c26da 121 SUPERFAMILY SSF109709 37 105 3.01E-8 T 14-10-2018 C3497_08315 a2fb630e836a580f22b1327362d1d985 563 SUPERFAMILY SSF161098 293 553 8.24E-35 T 14-10-2018 IPR035906 MetI-like superfamily C3497_08315 a2fb630e836a580f22b1327362d1d985 563 Gene3D G3DSA:1.10.3720.10 301 562 6.4E-31 T 14-10-2018 IPR035906 MetI-like superfamily C3497_08315 a2fb630e836a580f22b1327362d1d985 563 SUPERFAMILY SSF161098 24 274 1.1E-40 T 14-10-2018 IPR035906 MetI-like superfamily C3497_08315 a2fb630e836a580f22b1327362d1d985 563 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 271 2.8E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_08315 a2fb630e836a580f22b1327362d1d985 563 Gene3D G3DSA:1.10.3720.10 23 284 3.1E-49 T 14-10-2018 IPR035906 MetI-like superfamily C3497_09180 25b6f3686646adc8f659a5d701b546dc 371 Pfam PF02120 Flagellar hook-length control protein FliK 296 368 2.2E-16 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal C3497_01485 f46085c9aefbef7c7026d6da49ca8b80 244 Pfam PF02104 SURF1 family 24 223 5.2E-33 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_11835 e064571741b9e893510911998a83ea66 311 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 309 6.3E-73 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 C3497_11835 e064571741b9e893510911998a83ea66 311 Gene3D G3DSA:3.30.200.20 4 104 2.1E-31 T 14-10-2018 C3497_11835 e064571741b9e893510911998a83ea66 311 ProSitePatterns PS01057 SAICAR synthetase signature 1. 106 120 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_11835 e064571741b9e893510911998a83ea66 311 Pfam PF01259 SAICAR synthetase 16 282 1.2E-98 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_11835 e064571741b9e893510911998a83ea66 311 ProSitePatterns PS01058 SAICAR synthetase signature 2. 219 227 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_11835 e064571741b9e893510911998a83ea66 311 SUPERFAMILY SSF56104 6 309 6.87E-101 T 14-10-2018 C3497_11835 e064571741b9e893510911998a83ea66 311 Gene3D G3DSA:3.30.470.20 106 263 1.4E-56 T 14-10-2018 C3497_11835 e064571741b9e893510911998a83ea66 311 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 307 25.256 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_13395 225cf24ceda1e1032a0f456ff688d388 778 Pfam PF07715 TonB-dependent Receptor Plug Domain 143 245 1.5E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_13395 225cf24ceda1e1032a0f456ff688d388 778 SUPERFAMILY SSF56935 100 778 1.83E-126 T 14-10-2018 C3497_13395 225cf24ceda1e1032a0f456ff688d388 778 Gene3D G3DSA:2.40.170.20 255 778 2.4E-126 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3497_13395 225cf24ceda1e1032a0f456ff688d388 778 Gene3D G3DSA:3.55.50.30 16 119 1.9E-26 T 14-10-2018 C3497_13395 225cf24ceda1e1032a0f456ff688d388 778 Pfam PF00593 TonB dependent receptor 332 777 2.4E-47 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_13395 225cf24ceda1e1032a0f456ff688d388 778 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 145 776 3.8E-104 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 C3497_13395 225cf24ceda1e1032a0f456ff688d388 778 Gene3D G3DSA:2.170.130.10 120 254 1.3E-38 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_13395 225cf24ceda1e1032a0f456ff688d388 778 SMART SM00965 46 96 1.5E-12 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 C3497_11480 3f4e7930190efb65b5b1f6ea6111faf3 279 Pfam PF00005 ABC transporter 32 181 3.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_11480 3f4e7930190efb65b5b1f6ea6111faf3 279 Gene3D G3DSA:3.40.50.300 15 261 2.8E-67 T 14-10-2018 C3497_11480 3f4e7930190efb65b5b1f6ea6111faf3 279 SUPERFAMILY SSF52540 17 244 2.23E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11480 3f4e7930190efb65b5b1f6ea6111faf3 279 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_11480 3f4e7930190efb65b5b1f6ea6111faf3 279 SMART SM00382 41 246 1.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00165 33548506889696b75bf102c474e2de26 314 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 307 1.9E-47 T 14-10-2018 IPR003797 DegV C3497_00165 33548506889696b75bf102c474e2de26 314 Gene3D G3DSA:3.30.1180.10 171 308 2.7E-12 T 14-10-2018 C3497_00165 33548506889696b75bf102c474e2de26 314 SUPERFAMILY SSF82549 1 306 2.2E-42 T 14-10-2018 C3497_00165 33548506889696b75bf102c474e2de26 314 Gene3D G3DSA:3.40.50.10170 1 167 5.1E-19 T 14-10-2018 C3497_00165 33548506889696b75bf102c474e2de26 314 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 306 3.5E-30 T 14-10-2018 IPR003797 DegV C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 158 1.2E-57 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 Gene3D G3DSA:3.40.50.620 4 163 1.6E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 35.135 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 Pfam PF01467 Cytidylyltransferase-like 7 135 2.7E-21 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 6.4E-49 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 6.4E-49 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 6.4E-49 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 6.4E-49 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 6.4E-49 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 SUPERFAMILY SSF52374 5 157 5.36E-44 T 14-10-2018 C3497_02580 8bf06c0b7f13711b17cfc47ee0379aa3 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 60 1.1E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3497_10850 0dfaa63c97aad9f81b4ff313351d0d1f 313 Pfam PF06114 IrrE N-terminal-like domain 47 152 2.3E-22 T 14-10-2018 IPR010359 IrrE N-terminal-like domain C3497_10850 0dfaa63c97aad9f81b4ff313351d0d1f 313 Gene3D G3DSA:3.40.390.50 42 114 4.5E-10 T 14-10-2018 C3497_02405 036f936134f68c0a7eb24949588179d9 298 SUPERFAMILY SSF161111 121 294 1.44E-32 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3497_02405 036f936134f68c0a7eb24949588179d9 298 Pfam PF00403 Heavy-metal-associated domain 34 82 4.8E-5 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C3497_02405 036f936134f68c0a7eb24949588179d9 298 Gene3D G3DSA:1.20.1510.10 122 296 3.2E-12 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3497_02405 036f936134f68c0a7eb24949588179d9 298 Pfam PF01545 Cation efflux family 124 294 3.9E-13 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3497_02405 036f936134f68c0a7eb24949588179d9 298 SUPERFAMILY SSF55008 34 94 1.44E-8 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3497_05385 a0e92233360b16cad246be3b850b2541 178 SMART SM00448 6 117 4.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05385 a0e92233360b16cad246be3b850b2541 178 Pfam PF02954 Bacterial regulatory protein, Fis family 134 173 2.4E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_05385 a0e92233360b16cad246be3b850b2541 178 SUPERFAMILY SSF52172 7 163 5.41E-30 T 14-10-2018 IPR011006 CheY-like superfamily C3497_05385 a0e92233360b16cad246be3b850b2541 178 Pfam PF00072 Response regulator receiver domain 9 117 1.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05385 a0e92233360b16cad246be3b850b2541 178 Gene3D G3DSA:3.40.50.2300 7 119 5.4E-28 T 14-10-2018 C3497_05385 a0e92233360b16cad246be3b850b2541 178 Gene3D G3DSA:1.10.10.60 120 176 9.8E-23 T 14-10-2018 C3497_02430 7098b91dee4cbe71d3001381fdb1559e 79 SMART SM00530 12 67 1.7E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_02430 7098b91dee4cbe71d3001381fdb1559e 79 SUPERFAMILY SSF47413 5 70 6.61E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3497_02430 7098b91dee4cbe71d3001381fdb1559e 79 Pfam PF01381 Helix-turn-helix 14 66 8.9E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_02430 7098b91dee4cbe71d3001381fdb1559e 79 Gene3D G3DSA:1.10.260.40 2 73 2.2E-19 T 14-10-2018 C3497_07670 dba8d69a8a8583d2cd8cec4d7edbb24d 905 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 113 3.4E-14 T 14-10-2018 IPR000014 PAS domain C3497_07670 dba8d69a8a8583d2cd8cec4d7edbb24d 905 Gene3D G3DSA:1.10.287.950 364 515 1.2E-15 T 14-10-2018 C3497_07670 dba8d69a8a8583d2cd8cec4d7edbb24d 905 SMART SM00304 365 417 0.002 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_07670 dba8d69a8a8583d2cd8cec4d7edbb24d 905 SUPERFAMILY SSF55785 21 114 1.74E-27 T 14-10-2018 IPR035965 PAS domain superfamily C3497_07670 dba8d69a8a8583d2cd8cec4d7edbb24d 905 Pfam PF08447 PAS fold 31 112 2.4E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3497_07670 dba8d69a8a8583d2cd8cec4d7edbb24d 905 SUPERFAMILY SSF58104 386 510 3.14E-8 T 14-10-2018 C3497_07670 dba8d69a8a8583d2cd8cec4d7edbb24d 905 Pfam PF02203 Tar ligand binding domain homologue 147 318 1.4E-17 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 C3497_07670 dba8d69a8a8583d2cd8cec4d7edbb24d 905 Gene3D G3DSA:3.30.450.20 19 144 5.5E-27 T 14-10-2018 C3497_13455 91b63d268e2be6dba089741aa70b7f33 647 Pfam PF00593 TonB dependent receptor 273 642 2.3E-55 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_13455 91b63d268e2be6dba089741aa70b7f33 647 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 164 9.0E-25 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_13455 91b63d268e2be6dba089741aa70b7f33 647 Gene3D G3DSA:2.170.130.10 36 169 6.5E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_13455 91b63d268e2be6dba089741aa70b7f33 647 SUPERFAMILY SSF56935 42 647 3.77E-116 T 14-10-2018 C3497_13455 91b63d268e2be6dba089741aa70b7f33 647 Gene3D G3DSA:2.40.170.20 175 647 1.5E-105 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3497_00515 e52136e4d2262deb6a3db35bb1f8cb6c 288 SUPERFAMILY SSF81345 9 268 1.06E-18 T 14-10-2018 IPR037294 ABC transporter, BtuC-like C3497_00515 e52136e4d2262deb6a3db35bb1f8cb6c 288 Pfam PF00950 ABC 3 transport family 12 270 1.4E-49 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 C3497_09770 15e8e23232bdc8c694dc47b39f533668 346 Pfam PF13358 DDE superfamily endonuclease 173 311 4.2E-34 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain C3497_09770 15e8e23232bdc8c694dc47b39f533668 346 Gene3D G3DSA:3.30.420.470 141 340 3.9E-17 T 14-10-2018 C3497_09770 15e8e23232bdc8c694dc47b39f533668 346 Pfam PF13592 Winged helix-turn helix 99 157 2.0E-18 T 14-10-2018 IPR025959 Winged helix-turn helix domain C3497_09770 15e8e23232bdc8c694dc47b39f533668 346 SUPERFAMILY SSF46689 15 133 3.4E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_09770 15e8e23232bdc8c694dc47b39f533668 346 Pfam PF13384 Homeodomain-like domain 17 60 1.8E-6 T 14-10-2018 C3497_03065 ed3020509c20ee505c8b52b09795106a 154 Gene3D G3DSA:3.30.70.920 55 138 1.2E-24 T 14-10-2018 C3497_03065 ed3020509c20ee505c8b52b09795106a 154 Gene3D G3DSA:1.10.10.10 3 54 1.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_03065 ed3020509c20ee505c8b52b09795106a 154 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 7.1E-27 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain C3497_03065 ed3020509c20ee505c8b52b09795106a 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site C3497_03065 ed3020509c20ee505c8b52b09795106a 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.5E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_03065 ed3020509c20ee505c8b52b09795106a 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.5E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_03065 ed3020509c20ee505c8b52b09795106a 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.5E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_03065 ed3020509c20ee505c8b52b09795106a 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 6.6E-16 T 14-10-2018 C3497_03065 ed3020509c20ee505c8b52b09795106a 154 SUPERFAMILY SSF54909 69 151 6.97E-24 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3497_03065 ed3020509c20ee505c8b52b09795106a 154 SMART SM00344 2 111 2.8E-35 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 C3497_03065 ed3020509c20ee505c8b52b09795106a 154 SUPERFAMILY SSF46785 1 61 1.78E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 SUPERFAMILY SSF51230 3 96 8.77E-24 T 14-10-2018 IPR011053 Single hybrid motif C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 SUPERFAMILY SSF55424 466 589 4.12E-40 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 SUPERFAMILY SSF51905 112 453 9.58E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 116 135 2.7E-37 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 408 430 2.7E-37 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 395 2.7E-37 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 309 2.7E-37 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 271 2.7E-37 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 380 394 5.7E-70 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 531 546 5.7E-70 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 430 5.7E-70 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 316 5.7E-70 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 553 573 5.7E-70 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 466 487 5.7E-70 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 163 5.7E-70 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 115 137 5.7E-70 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 265 5.7E-70 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 114 443 9.0E-57 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 Gene3D G3DSA:3.30.390.30 469 590 2.2E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 Gene3D G3DSA:2.40.50.100 3 81 4.7E-23 T 14-10-2018 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 470 578 8.3E-37 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 Gene3D G3DSA:3.50.50.60 268 389 6.9E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 PIRSF PIRSF000350 32 589 2.4E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 113 584 2.3E-146 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 Pfam PF00364 Biotin-requiring enzyme 6 76 5.2E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 149 159 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 C3497_11680 dd5c7a48185a416f48acb7a5e6248ef3 595 Gene3D G3DSA:3.50.50.60 114 448 6.9E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_11035 844783ae9c1b010cdc2508e6acb1903c 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 104 110 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3497_11035 844783ae9c1b010cdc2508e6acb1903c 369 Gene3D G3DSA:3.40.50.150 20 206 4.6E-18 T 14-10-2018 C3497_11035 844783ae9c1b010cdc2508e6acb1903c 369 SUPERFAMILY SSF53335 18 178 1.82E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_11035 844783ae9c1b010cdc2508e6acb1903c 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 5.8E-8 T 14-10-2018 C3497_11035 844783ae9c1b010cdc2508e6acb1903c 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 5.8E-8 T 14-10-2018 C3497_11035 844783ae9c1b010cdc2508e6acb1903c 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 5.8E-8 T 14-10-2018 C3497_10920 6eb1594985856ccd613bf0a72530dfe7 183 Pfam PF12101 Protein of unknown function (DUF3577) 4 132 2.8E-60 T 14-10-2018 IPR021960 Protein of unknown function DUF3577 C3497_10695 90349c450a95a128a7fee06d9ef05ea2 156 Gene3D G3DSA:1.20.1550.10 14 121 3.9E-8 T 14-10-2018 IPR023380 DsbB-like superfamily C3497_10695 90349c450a95a128a7fee06d9ef05ea2 156 Pfam PF02600 Disulfide bond formation protein DsbB 19 112 3.0E-6 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 C3497_10695 90349c450a95a128a7fee06d9ef05ea2 156 SUPERFAMILY SSF158442 21 143 1.16E-18 T 14-10-2018 IPR023380 DsbB-like superfamily C3497_11775 fa3bd74d81cb1a954005ad07908f153e 761 Gene3D G3DSA:3.40.50.300 377 675 1.3E-117 T 14-10-2018 C3497_11775 fa3bd74d81cb1a954005ad07908f153e 761 SMART SM00843 693 758 1.7E-40 T 14-10-2018 IPR018541 FtsK gamma domain C3497_11775 fa3bd74d81cb1a954005ad07908f153e 761 SUPERFAMILY SSF52540 370 661 3.45E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11775 fa3bd74d81cb1a954005ad07908f153e 761 Pfam PF09397 Ftsk gamma domain 695 755 4.6E-27 T 14-10-2018 IPR018541 FtsK gamma domain C3497_11775 fa3bd74d81cb1a954005ad07908f153e 761 Gene3D G3DSA:3.30.980.40 272 376 3.3E-29 T 14-10-2018 C3497_11775 fa3bd74d81cb1a954005ad07908f153e 761 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 19 192 3.2E-47 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region C3497_11775 fa3bd74d81cb1a954005ad07908f153e 761 SUPERFAMILY SSF46785 693 758 5.44E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_11775 fa3bd74d81cb1a954005ad07908f153e 761 Gene3D G3DSA:1.10.10.10 689 754 4.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_11775 fa3bd74d81cb1a954005ad07908f153e 761 Pfam PF01580 FtsK/SpoIIIE family 380 589 2.4E-67 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 Gene3D G3DSA:3.40.50.720 134 341 1.1E-142 T 14-10-2018 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 222 303 3.0E-8 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 153 203 5.0E-5 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 PIRSF PIRSF000188 1 350 4.5E-145 T 14-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 14 130 2.8E-26 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 Gene3D G3DSA:3.40.50.10860 11 348 1.1E-142 T 14-10-2018 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 291 302 1.9E-16 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.9E-16 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 181 201 1.9E-16 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 SMART SM00839 149 350 2.6E-75 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 SUPERFAMILY SSF53223 5 137 3.2E-43 T 14-10-2018 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3497_03085 f71cc980e869dfe43fc605c169db0461 350 SUPERFAMILY SSF51735 148 348 9.81E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_04140 520ce9cbf685d162e05839d46cc2cb23 186 PIRSF PIRSF001467 13 184 4.3E-29 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 C3497_04140 520ce9cbf685d162e05839d46cc2cb23 186 Gene3D G3DSA:2.40.100.10 19 184 6.2E-64 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C3497_04140 520ce9cbf685d162e05839d46cc2cb23 186 SUPERFAMILY SSF50891 20 183 1.61E-60 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C3497_04140 520ce9cbf685d162e05839d46cc2cb23 186 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 58 75 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 C3497_04140 520ce9cbf685d162e05839d46cc2cb23 186 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 2.7E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3497_04140 520ce9cbf685d162e05839d46cc2cb23 186 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 37 52 2.7E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3497_04140 520ce9cbf685d162e05839d46cc2cb23 186 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 63 75 2.7E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3497_04140 520ce9cbf685d162e05839d46cc2cb23 186 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 24 180 1.7E-48 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3497_12135 18a13ce88bef9cc7562206e96897dd0b 411 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 39 410 41.165 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12135 18a13ce88bef9cc7562206e96897dd0b 411 Pfam PF01098 Cell cycle protein 44 402 4.8E-106 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_12135 18a13ce88bef9cc7562206e96897dd0b 411 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 42 401 2.5E-128 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_01010 3d1031a8c6b0ea95cc136ad4809da5e2 157 SUPERFAMILY SSF54862 4 137 3.85E-41 T 14-10-2018 C3497_01010 3d1031a8c6b0ea95cc136ad4809da5e2 157 Pfam PF00037 4Fe-4S binding domain 6 22 7.0E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_01010 3d1031a8c6b0ea95cc136ad4809da5e2 157 Pfam PF13247 4Fe-4S dicluster domain 49 134 1.4E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_01010 3d1031a8c6b0ea95cc136ad4809da5e2 157 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_01010 3d1031a8c6b0ea95cc136ad4809da5e2 157 Gene3D G3DSA:3.30.70.20 5 137 4.5E-25 T 14-10-2018 C3497_01010 3d1031a8c6b0ea95cc136ad4809da5e2 157 Gene3D G3DSA:3.30.70.20 59 112 4.5E-25 T 14-10-2018 C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 SUPERFAMILY SSF46894 131 197 1.05E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 Gene3D G3DSA:1.10.10.10 133 197 1.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 SMART SM00448 4 115 7.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 195 8.1E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 Pfam PF00072 Response regulator receiver domain 8 115 1.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 SMART SM00421 139 196 3.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 Gene3D G3DSA:3.40.50.2300 1 131 5.7E-46 T 14-10-2018 C3497_02755 06e8415b29f078da972b1ed3dfbbddbe 201 SUPERFAMILY SSF52172 8 153 1.85E-31 T 14-10-2018 IPR011006 CheY-like superfamily C3497_03485 56f6b52b232b28a5389494c8cbbf0fbd 242 PIRSF PIRSF015601 1 242 2.6E-51 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 C3497_03485 56f6b52b232b28a5389494c8cbbf0fbd 242 Gene3D G3DSA:2.40.240.20 1 64 2.0E-18 T 14-10-2018 C3497_03485 56f6b52b232b28a5389494c8cbbf0fbd 242 Pfam PF04452 RNA methyltransferase 18 237 5.7E-64 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 C3497_03485 56f6b52b232b28a5389494c8cbbf0fbd 242 SUPERFAMILY SSF88697 1 59 1.38E-14 T 14-10-2018 IPR015947 PUA-like superfamily C3497_03485 56f6b52b232b28a5389494c8cbbf0fbd 242 Gene3D G3DSA:3.40.1280.10 72 242 2.9E-59 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3497_03485 56f6b52b232b28a5389494c8cbbf0fbd 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 241 7.2E-51 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 C3497_03485 56f6b52b232b28a5389494c8cbbf0fbd 242 SUPERFAMILY SSF75217 71 242 4.36E-51 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3497_09455 08a7c449f959b7fd74d1611825d23b24 200 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 123 138 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 C3497_09455 08a7c449f959b7fd74d1611825d23b24 200 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 198 2.6E-63 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 C3497_09455 08a7c449f959b7fd74d1611825d23b24 200 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 1 197 7.6E-60 T 14-10-2018 C3497_09455 08a7c449f959b7fd74d1611825d23b24 200 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 199 32.786 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 C3497_09455 08a7c449f959b7fd74d1611825d23b24 200 Gene3D G3DSA:3.40.50.150 1 200 5.4E-70 T 14-10-2018 C3497_09455 08a7c449f959b7fd74d1611825d23b24 200 SUPERFAMILY SSF53335 5 198 4.18E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_07325 649ac760f8e071d44014c1a0fb42a4e3 340 SUPERFAMILY SSF51161 30 314 2.51E-79 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3497_07325 649ac760f8e071d44014c1a0fb42a4e3 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 323 37.658 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 C3497_07325 649ac760f8e071d44014c1a0fb42a4e3 340 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 256 290 2.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_07325 649ac760f8e071d44014c1a0fb42a4e3 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 145 1.3E-8 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_07325 649ac760f8e071d44014c1a0fb42a4e3 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 219 254 1.8E-6 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_07325 649ac760f8e071d44014c1a0fb42a4e3 340 Gene3D G3DSA:3.40.1390.10 1 95 3.1E-26 T 14-10-2018 C3497_07325 649ac760f8e071d44014c1a0fb42a4e3 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 326 9.5E-114 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 C3497_07325 649ac760f8e071d44014c1a0fb42a4e3 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 21 87 1.4E-20 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 C3497_07325 649ac760f8e071d44014c1a0fb42a4e3 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 222 250 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C3497_07325 649ac760f8e071d44014c1a0fb42a4e3 340 Gene3D G3DSA:2.160.10.10 96 305 6.4E-65 T 14-10-2018 C3497_08115 4b4c52388e68a73e6829319ca6f9ab22 203 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 19 191 1.4E-29 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT C3497_12060 48d3538c0ca87d726d215f77138f8f69 155 Gene3D G3DSA:2.60.200.20 10 122 4.8E-29 T 14-10-2018 C3497_12060 48d3538c0ca87d726d215f77138f8f69 155 Pfam PF00498 FHA domain 47 110 3.1E-17 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C3497_12060 48d3538c0ca87d726d215f77138f8f69 155 SMART SM00240 46 96 1.7E-10 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C3497_12060 48d3538c0ca87d726d215f77138f8f69 155 SUPERFAMILY SSF49879 26 130 4.21E-26 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 C3497_04925 344f8167b6475e9c027783d16748d45c 472 SMART SM00670 16 151 1.1E-10 T 14-10-2018 IPR002716 PIN domain C3497_04925 344f8167b6475e9c027783d16748d45c 472 Pfam PF02562 PhoH-like protein 259 463 6.3E-54 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 C3497_04925 344f8167b6475e9c027783d16748d45c 472 Gene3D G3DSA:3.40.50.300 257 471 6.3E-66 T 14-10-2018 C3497_04925 344f8167b6475e9c027783d16748d45c 472 SUPERFAMILY SSF88723 16 168 1.59E-9 T 14-10-2018 IPR029060 PIN-like domain superfamily C3497_04925 344f8167b6475e9c027783d16748d45c 472 Pfam PF13638 PIN domain 18 163 5.2E-39 T 14-10-2018 IPR002716 PIN domain C3497_04925 344f8167b6475e9c027783d16748d45c 472 Gene3D G3DSA:3.40.50.1010 13 166 3.0E-24 T 14-10-2018 C3497_04925 344f8167b6475e9c027783d16748d45c 472 SUPERFAMILY SSF52540 258 452 6.04E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 3.7E-27 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 1.6E-12 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 36 55 1.6E-12 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 272 294 1.6E-12 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 426 448 1.6E-12 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 Pfam PF00361 Proton-conducting membrane transporter 135 416 2.7E-86 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 322 334 3.5E-66 T 14-10-2018 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 232 253 3.5E-66 T 14-10-2018 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 3.5E-66 T 14-10-2018 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 3.5E-66 T 14-10-2018 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 254 280 3.5E-66 T 14-10-2018 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 3.5E-66 T 14-10-2018 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 427 446 3.5E-66 T 14-10-2018 C3497_04445 283093516d45b7ce46ecf05e1ef50df4 668 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 7 664 1.4E-246 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_02270 f9281e2c5372e71f0ce8ee632f31d44c 298 SMART SM00382 95 221 0.0032 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_02270 f9281e2c5372e71f0ce8ee632f31d44c 298 Pfam PF05673 Protein of unknown function (DUF815) 44 295 2.3E-109 T 14-10-2018 IPR008533 Domain of unknown function DUF815 C3497_02270 f9281e2c5372e71f0ce8ee632f31d44c 298 SUPERFAMILY SSF52540 4 201 5.27E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02270 f9281e2c5372e71f0ce8ee632f31d44c 298 Gene3D G3DSA:3.40.50.300 66 202 2.8E-10 T 14-10-2018 C3497_01950 0cde59cfa572fb5b60fad9a022787e6e 60 Pfam PF00327 Ribosomal protein L30p/L7e 6 56 1.5E-20 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain C3497_01950 0cde59cfa572fb5b60fad9a022787e6e 60 PIRSF PIRSF002211 1 60 2.9E-29 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01950 0cde59cfa572fb5b60fad9a022787e6e 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 21.56 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01950 0cde59cfa572fb5b60fad9a022787e6e 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 9.6E-26 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01950 0cde59cfa572fb5b60fad9a022787e6e 60 SUPERFAMILY SSF55129 4 59 4.84E-22 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily C3497_01950 0cde59cfa572fb5b60fad9a022787e6e 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 24 56 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site C3497_01950 0cde59cfa572fb5b60fad9a022787e6e 60 Gene3D G3DSA:3.30.1390.20 2 59 6.3E-27 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily C3497_01700 eb92c17666ee90e4459c73b62d8ca896 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 282 6.5E-26 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_13660 a616dd0975c6888ced5e9a0853dd7e49 107 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 2.0E-32 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 C3497_13660 a616dd0975c6888ced5e9a0853dd7e49 107 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.3E-27 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 C3497_13660 a616dd0975c6888ced5e9a0853dd7e49 107 Gene3D G3DSA:3.30.160.100 1 106 1.7E-36 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like C3497_13660 a616dd0975c6888ced5e9a0853dd7e49 107 SUPERFAMILY SSF69754 1 101 1.96E-36 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like C3497_01200 0bd2a3006f249a675b68b8558f695339 353 Pfam PF00072 Response regulator receiver domain 1 103 1.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01200 0bd2a3006f249a675b68b8558f695339 353 SMART SM00448 1 121 1.1E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01200 0bd2a3006f249a675b68b8558f695339 353 Pfam PF01339 CheB methylesterase 169 347 3.5E-62 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 C3497_01200 0bd2a3006f249a675b68b8558f695339 353 SUPERFAMILY SSF52738 164 351 1.28E-72 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal C3497_01200 0bd2a3006f249a675b68b8558f695339 353 PIRSF PIRSF000876 1 353 7.6E-133 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 C3497_01200 0bd2a3006f249a675b68b8558f695339 353 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 352 39.196 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 C3497_01200 0bd2a3006f249a675b68b8558f695339 353 Gene3D G3DSA:3.40.50.180 158 353 3.5E-77 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal C3497_01200 0bd2a3006f249a675b68b8558f695339 353 Gene3D G3DSA:3.40.50.2300 1 127 3.0E-29 T 14-10-2018 C3497_01200 0bd2a3006f249a675b68b8558f695339 353 SUPERFAMILY SSF52172 1 103 4.27E-27 T 14-10-2018 IPR011006 CheY-like superfamily C3497_07815 187912c00c54f77d84daf6f24470ba21 459 Gene3D G3DSA:3.30.565.10 315 442 1.3E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_07815 187912c00c54f77d84daf6f24470ba21 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 441 1.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_07815 187912c00c54f77d84daf6f24470ba21 459 SMART SM00387 352 444 2.3E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_07815 187912c00c54f77d84daf6f24470ba21 459 Gene3D G3DSA:1.10.287.130 169 305 7.7E-7 T 14-10-2018 C3497_07815 187912c00c54f77d84daf6f24470ba21 459 SUPERFAMILY SSF55874 354 441 1.28E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_07815 187912c00c54f77d84daf6f24470ba21 459 SMART SM00304 172 224 0.0016 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_07815 187912c00c54f77d84daf6f24470ba21 459 Pfam PF07730 Histidine kinase 246 310 1.7E-11 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 C3497_06230 5ae6f402d20bcbde7ff68465c4615380 225 SMART SM00900 112 204 8.8E-36 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 C3497_06230 5ae6f402d20bcbde7ff68465c4615380 225 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 18 206 25.277 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 C3497_06230 5ae6f402d20bcbde7ff68465c4615380 225 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 26 205 4.8E-59 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 C3497_06230 5ae6f402d20bcbde7ff68465c4615380 225 PIRSF PIRSF006091 13 216 3.1E-69 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 C3497_06230 5ae6f402d20bcbde7ff68465c4615380 225 Pfam PF04205 FMN-binding domain 112 201 7.2E-19 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 C3497_01005 9ca8a849173af3330c592c249067e7ec 409 Pfam PF00994 Probable molybdopterin binding domain 190 323 1.2E-28 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_01005 9ca8a849173af3330c592c249067e7ec 409 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 184 319 5.9E-32 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_01005 9ca8a849173af3330c592c249067e7ec 409 SUPERFAMILY SSF53218 184 328 2.88E-44 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C3497_01005 9ca8a849173af3330c592c249067e7ec 409 Gene3D G3DSA:2.170.190.11 55 148 2.0E-136 T 14-10-2018 C3497_01005 9ca8a849173af3330c592c249067e7ec 409 SUPERFAMILY SSF63867 334 408 1.31E-20 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_01005 9ca8a849173af3330c592c249067e7ec 409 Pfam PF03453 MoeA N-terminal region (domain I and II) 14 174 1.0E-42 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_01005 9ca8a849173af3330c592c249067e7ec 409 SMART SM00852 187 324 3.5E-42 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_01005 9ca8a849173af3330c592c249067e7ec 409 Pfam PF03454 MoeA C-terminal region (domain IV) 339 405 1.4E-17 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_01005 9ca8a849173af3330c592c249067e7ec 409 Gene3D G3DSA:3.90.105.10 31 181 2.0E-136 T 14-10-2018 C3497_01005 9ca8a849173af3330c592c249067e7ec 409 Gene3D G3DSA:2.40.340.10 335 400 2.0E-136 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_01005 9ca8a849173af3330c592c249067e7ec 409 Gene3D G3DSA:3.40.980.10 182 334 2.0E-136 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C3497_01005 9ca8a849173af3330c592c249067e7ec 409 SUPERFAMILY SSF63882 12 182 5.49E-55 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_01750 aa7250556a5ce6ac69111d22f63142f2 236 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 82 4.6E-6 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain C3497_01750 aa7250556a5ce6ac69111d22f63142f2 236 SUPERFAMILY SSF52540 1 131 1.45E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01750 aa7250556a5ce6ac69111d22f63142f2 236 Gene3D G3DSA:3.40.50.300 3 202 4.7E-11 T 14-10-2018 C3497_06085 b7ba3ad80a60d8f3b4425953dbea977e 338 Gene3D G3DSA:3.30.70.1630 39 204 2.9E-24 T 14-10-2018 C3497_06085 b7ba3ad80a60d8f3b4425953dbea977e 338 PIRSF PIRSF006487 15 336 1.4E-15 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 C3497_06085 b7ba3ad80a60d8f3b4425953dbea977e 338 Gene3D G3DSA:2.40.30.160 210 325 1.2E-34 T 14-10-2018 C3497_06085 b7ba3ad80a60d8f3b4425953dbea977e 338 Pfam PF01571 Aminomethyltransferase folate-binding domain 39 214 3.1E-14 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain C3497_06085 b7ba3ad80a60d8f3b4425953dbea977e 338 Gene3D G3DSA:3.30.70.1400 40 127 2.9E-24 T 14-10-2018 C3497_06085 b7ba3ad80a60d8f3b4425953dbea977e 338 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 201 266 1.6E-26 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site C3497_06085 b7ba3ad80a60d8f3b4425953dbea977e 338 SUPERFAMILY SSF103025 20 256 2.35E-56 T 14-10-2018 C3497_06085 b7ba3ad80a60d8f3b4425953dbea977e 338 SUPERFAMILY SSF101790 258 338 2.09E-12 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal C3497_14440 6d94e9047e724d827ee16be46ef33bc6 75 Pfam PF11391 Protein of unknown function (DUF2798) 11 69 1.6E-19 T 14-10-2018 IPR021529 Protein of unknown function DUF2798 C3497_08260 dc8dc3ed4909f53ea2f6609d65800e62 115 SUPERFAMILY SSF143430 9 81 1.06E-16 T 14-10-2018 C3497_08260 dc8dc3ed4909f53ea2f6609d65800e62 115 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 7 104 11.873 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 C3497_08260 dc8dc3ed4909f53ea2f6609d65800e62 115 Pfam PF09827 CRISPR associated protein Cas2 9 74 8.0E-14 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 C3497_08260 dc8dc3ed4909f53ea2f6609d65800e62 115 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 10 77 3.1E-7 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 C3497_08260 dc8dc3ed4909f53ea2f6609d65800e62 115 Gene3D G3DSA:3.30.70.240 6 90 1.9E-15 T 14-10-2018 C3497_00770 c41419472cbc1797bda12460cc4d05c2 105 PRINTS PR00297 10kDa chaperonin signature 81 94 1.7E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_00770 c41419472cbc1797bda12460cc4d05c2 105 PRINTS PR00297 10kDa chaperonin signature 60 72 1.7E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_00770 c41419472cbc1797bda12460cc4d05c2 105 PRINTS PR00297 10kDa chaperonin signature 3 18 1.7E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_00770 c41419472cbc1797bda12460cc4d05c2 105 PRINTS PR00297 10kDa chaperonin signature 25 46 1.7E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_00770 c41419472cbc1797bda12460cc4d05c2 105 Gene3D G3DSA:2.30.33.40 1 104 1.5E-39 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 C3497_00770 c41419472cbc1797bda12460cc4d05c2 105 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 1.5E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_00770 c41419472cbc1797bda12460cc4d05c2 105 SMART SM00883 2 94 4.3E-55 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_00770 c41419472cbc1797bda12460cc4d05c2 105 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 C3497_00770 c41419472cbc1797bda12460cc4d05c2 105 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.327 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3497_00770 c41419472cbc1797bda12460cc4d05c2 105 SUPERFAMILY SSF50129 1 95 2.43E-34 T 14-10-2018 IPR011032 GroES-like superfamily C3497_08435 5843543bc6448d33b883745aaae4faf7 72 Gene3D G3DSA:2.30.170.50 1 70 1.5E-34 T 14-10-2018 C3497_08435 5843543bc6448d33b883745aaae4faf7 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.5E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_08435 5843543bc6448d33b883745aaae4faf7 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.5E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_08435 5843543bc6448d33b883745aaae4faf7 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.5E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_08435 5843543bc6448d33b883745aaae4faf7 72 Pfam PF01197 Ribosomal protein L31 1 66 6.3E-35 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_08435 5843543bc6448d33b883745aaae4faf7 72 SUPERFAMILY SSF143800 1 67 3.88E-28 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_08435 5843543bc6448d33b883745aaae4faf7 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 3.3E-36 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_08435 5843543bc6448d33b883745aaae4faf7 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.503 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_08435 5843543bc6448d33b883745aaae4faf7 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_13840 d58b61c098c248b197fbf57b47ddb28d 254 Gene3D G3DSA:3.40.1010.10 1 115 1.6E-28 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3497_13840 d58b61c098c248b197fbf57b47ddb28d 254 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 5 248 1.8E-86 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 C3497_13840 d58b61c098c248b197fbf57b47ddb28d 254 Gene3D G3DSA:3.30.950.10 116 249 2.1E-47 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3497_13840 d58b61c098c248b197fbf57b47ddb28d 254 SUPERFAMILY SSF53790 1 234 4.71E-49 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3497_13840 d58b61c098c248b197fbf57b47ddb28d 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 213 1.1E-35 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3497_01905 d9ca9cb70fb6a2b0384d0cefd3f5afb4 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 2.0E-22 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01905 d9ca9cb70fb6a2b0384d0cefd3f5afb4 89 SUPERFAMILY SSF50249 9 86 1.59E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_01905 d9ca9cb70fb6a2b0384d0cefd3f5afb4 89 PRINTS PR00973 Ribosomal protein S17 family signature 28 51 4.4E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01905 d9ca9cb70fb6a2b0384d0cefd3f5afb4 89 PRINTS PR00973 Ribosomal protein S17 family signature 60 70 4.4E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01905 d9ca9cb70fb6a2b0384d0cefd3f5afb4 89 PRINTS PR00973 Ribosomal protein S17 family signature 70 77 4.4E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01905 d9ca9cb70fb6a2b0384d0cefd3f5afb4 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 5.4E-33 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01905 d9ca9cb70fb6a2b0384d0cefd3f5afb4 89 Gene3D G3DSA:2.40.50.140 5 88 1.2E-32 T 14-10-2018 C3497_01905 d9ca9cb70fb6a2b0384d0cefd3f5afb4 89 Pfam PF00366 Ribosomal protein S17 14 80 2.5E-29 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01905 d9ca9cb70fb6a2b0384d0cefd3f5afb4 89 ProSitePatterns PS00056 Ribosomal protein S17 signature. 60 72 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01905 d9ca9cb70fb6a2b0384d0cefd3f5afb4 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 9 84 22.649 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_08030 e531fba906807c92e5fb1a8490ae1b51 211 PIRSF PIRSF006324 3 209 7.1E-51 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3497_08030 e531fba906807c92e5fb1a8490ae1b51 211 Pfam PF01810 LysE type translocator 16 207 6.1E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3497_13000 19e91f1220be1e28fc10083bf2c9fb4d 122 Gene3D G3DSA:2.40.10.220 3 122 1.0E-38 T 14-10-2018 C3497_13000 19e91f1220be1e28fc10083bf2c9fb4d 122 PIRSF PIRSF028141 3 122 1.8E-40 T 14-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type C3497_13000 19e91f1220be1e28fc10083bf2c9fb4d 122 SUPERFAMILY SSF141371 2 120 1.96E-32 T 14-10-2018 C3497_13000 19e91f1220be1e28fc10083bf2c9fb4d 122 Pfam PF07238 PilZ domain 6 103 2.6E-17 T 14-10-2018 IPR009875 PilZ domain GO:0035438 C3497_04680 88ab246bc0e38d0fb219c360e467ab64 286 Gene3D G3DSA:1.10.3210.10 19 273 5.9E-27 T 14-10-2018 C3497_04680 88ab246bc0e38d0fb219c360e467ab64 286 SUPERFAMILY SSF109604 21 269 1.63E-32 T 14-10-2018 C3497_04680 88ab246bc0e38d0fb219c360e467ab64 286 Pfam PF08668 HDOD domain 23 216 2.3E-16 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_05225 31d4add3c0d039c7f2317f9c3fac66a8 545 SUPERFAMILY SSF54862 446 544 1.94E-28 T 14-10-2018 C3497_05225 31d4add3c0d039c7f2317f9c3fac66a8 545 SUPERFAMILY SSF54373 210 305 8.24E-37 T 14-10-2018 C3497_05225 31d4add3c0d039c7f2317f9c3fac66a8 545 SUPERFAMILY SSF51905 1 444 2.25E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_05225 31d4add3c0d039c7f2317f9c3fac66a8 545 Gene3D G3DSA:3.30.9.90 79 446 5.0E-196 T 14-10-2018 C3497_05225 31d4add3c0d039c7f2317f9c3fac66a8 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 442 543 6.7E-51 T 14-10-2018 C3497_05225 31d4add3c0d039c7f2317f9c3fac66a8 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 2.4E-7 T 14-10-2018 C3497_05225 31d4add3c0d039c7f2317f9c3fac66a8 545 Gene3D G3DSA:3.50.50.60 7 384 5.0E-196 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_05225 31d4add3c0d039c7f2317f9c3fac66a8 545 Gene3D G3DSA:3.30.70.20 447 540 4.3E-40 T 14-10-2018 C3497_05225 31d4add3c0d039c7f2317f9c3fac66a8 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 7.6E-6 T 14-10-2018 C3497_05225 31d4add3c0d039c7f2317f9c3fac66a8 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 178 193 7.6E-6 T 14-10-2018 C3497_00290 cff76413d49e2a1cc08386563f798516 419 Pfam PF05345 Putative Ig domain 367 407 7.5E-9 T 14-10-2018 IPR008009 Putative Ig C3497_00290 cff76413d49e2a1cc08386563f798516 419 Pfam PF05345 Putative Ig domain 273 312 1.6E-7 T 14-10-2018 IPR008009 Putative Ig C3497_00290 cff76413d49e2a1cc08386563f798516 419 Gene3D G3DSA:2.60.40.10 331 419 4.3E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold C3497_00290 cff76413d49e2a1cc08386563f798516 419 Gene3D G3DSA:2.60.40.10 228 327 1.3E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold C3497_00290 cff76413d49e2a1cc08386563f798516 419 SUPERFAMILY SSF49313 336 418 8.95E-10 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 C3497_00290 cff76413d49e2a1cc08386563f798516 419 SUPERFAMILY SSF49313 264 330 1.88E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 C3497_08860 b4ad8d75bcda075be504539965b23a5b 320 Pfam PF03741 Integral membrane protein TerC family 80 282 2.2E-56 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 C3497_08860 b4ad8d75bcda075be504539965b23a5b 320 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 5.4E-125 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 C3497_01955 7ba00d77de474a900c51dae4abc5acce 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.2E-28 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P C3497_01955 7ba00d77de474a900c51dae4abc5acce 146 SUPERFAMILY SSF52080 4 142 3.79E-42 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily C3497_01955 7ba00d77de474a900c51dae4abc5acce 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 2.8E-42 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01955 7ba00d77de474a900c51dae4abc5acce 146 Gene3D G3DSA:3.100.10.10 68 145 6.7E-12 T 14-10-2018 C3497_01955 7ba00d77de474a900c51dae4abc5acce 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 19.273 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 C3497_01955 7ba00d77de474a900c51dae4abc5acce 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_00530 37d4ee6decbd70dc08a3be19eb382b50 191 Pfam PF10986 Protein of unknown function (DUF2796) 35 187 7.1E-46 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 C3497_07225 352266eb6ad907757126b6652cdb0e2f 592 Pfam PF05299 M61 glycyl aminopeptidase 280 396 3.4E-48 T 14-10-2018 IPR007963 Peptidase M61, catalytic domain C3497_07225 352266eb6ad907757126b6652cdb0e2f 592 Gene3D G3DSA:1.10.390.60 186 461 3.5E-108 T 14-10-2018 C3497_07225 352266eb6ad907757126b6652cdb0e2f 592 SMART SM00228 485 553 2.4E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_07225 352266eb6ad907757126b6652cdb0e2f 592 SUPERFAMILY SSF50156 482 555 9.45E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3497_07225 352266eb6ad907757126b6652cdb0e2f 592 Pfam PF13180 PDZ domain 487 562 1.9E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3497_07225 352266eb6ad907757126b6652cdb0e2f 592 Gene3D G3DSA:2.60.40.3650 4 185 5.0E-62 T 14-10-2018 C3497_07225 352266eb6ad907757126b6652cdb0e2f 592 PIRSF PIRSF016493 1 591 2.1E-220 T 14-10-2018 IPR024191 Peptidase M61 C3497_07225 352266eb6ad907757126b6652cdb0e2f 592 Gene3D G3DSA:2.30.42.10 488 590 1.2E-17 T 14-10-2018 C3497_07225 352266eb6ad907757126b6652cdb0e2f 592 SUPERFAMILY SSF55486 210 426 1.54E-11 T 14-10-2018 C3497_07330 0709edaa971c781d46b0945d2e81e51b 167 SMART SM00935 8 164 5.0E-59 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 C3497_07330 0709edaa971c781d46b0945d2e81e51b 167 PIRSF PIRSF002094 1 167 8.1E-53 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 C3497_07330 0709edaa971c781d46b0945d2e81e51b 167 SUPERFAMILY SSF111384 23 163 1.83E-37 T 14-10-2018 C3497_07330 0709edaa971c781d46b0945d2e81e51b 167 Pfam PF03938 Outer membrane protein (OmpH-like) 10 163 1.9E-39 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 C3497_07330 0709edaa971c781d46b0945d2e81e51b 167 Gene3D G3DSA:3.30.910.20 23 163 1.0E-41 T 14-10-2018 IPR024930 Skp domain superfamily C3497_06100 99e6dda7e717c0f1402bbd2f7c266efc 350 SUPERFAMILY SSF52540 3 218 5.21E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06100 99e6dda7e717c0f1402bbd2f7c266efc 350 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 18 214 2.1E-62 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_06100 99e6dda7e717c0f1402bbd2f7c266efc 350 Pfam PF13177 DNA polymerase III, delta subunit 18 184 7.5E-40 T 14-10-2018 C3497_06100 99e6dda7e717c0f1402bbd2f7c266efc 350 Gene3D G3DSA:3.40.50.300 2 184 2.9E-49 T 14-10-2018 C3497_07660 411851317b877ec0c0462567061458b4 267 Pfam PF00970 Oxidoreductase FAD-binding domain 25 107 7.6E-8 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3497_07660 411851317b877ec0c0462567061458b4 267 SUPERFAMILY SSF52343 112 265 1.7E-41 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_07660 411851317b877ec0c0462567061458b4 267 Gene3D G3DSA:3.40.50.80 109 263 3.7E-41 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_07660 411851317b877ec0c0462567061458b4 267 SUPERFAMILY SSF63380 13 108 2.69E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3497_07660 411851317b877ec0c0462567061458b4 267 Gene3D G3DSA:2.40.30.10 3 106 8.9E-30 T 14-10-2018 C3497_07660 411851317b877ec0c0462567061458b4 267 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 60 67 2.3E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_07660 411851317b877ec0c0462567061458b4 267 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 120 139 2.3E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_07660 411851317b877ec0c0462567061458b4 267 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 224 232 2.3E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_07660 411851317b877ec0c0462567061458b4 267 Pfam PF00175 Oxidoreductase NAD-binding domain 121 238 1.4E-6 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3497_00725 c21f2ceaab852ba0071b0ff63a2072ec 389 Pfam PF01070 FMN-dependent dehydrogenase 14 376 2.9E-132 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 C3497_00725 c21f2ceaab852ba0071b0ff63a2072ec 389 SUPERFAMILY SSF51395 4 376 3.24E-105 T 14-10-2018 C3497_00725 c21f2ceaab852ba0071b0ff63a2072ec 389 Gene3D G3DSA:3.20.20.70 2 383 5.5E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_00725 c21f2ceaab852ba0071b0ff63a2072ec 389 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 274 280 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 C3497_00725 c21f2ceaab852ba0071b0ff63a2072ec 389 PIRSF PIRSF000138 1 380 2.8E-125 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 C3497_01215 7685c1ebfaa0e24fafa8fb212a25f76d 569 SUPERFAMILY SSF58104 241 508 9.81E-68 T 14-10-2018 C3497_01215 7685c1ebfaa0e24fafa8fb212a25f76d 569 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 492 1.1E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_01215 7685c1ebfaa0e24fafa8fb212a25f76d 569 Gene3D G3DSA:1.10.287.950 220 509 4.5E-78 T 14-10-2018 C3497_01215 7685c1ebfaa0e24fafa8fb212a25f76d 569 SMART SM00283 274 507 1.6E-66 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_01215 7685c1ebfaa0e24fafa8fb212a25f76d 569 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 9.8E-28 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_01215 7685c1ebfaa0e24fafa8fb212a25f76d 569 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 9.8E-28 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_01215 7685c1ebfaa0e24fafa8fb212a25f76d 569 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 9.8E-28 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_01215 7685c1ebfaa0e24fafa8fb212a25f76d 569 SMART SM00304 221 273 8.8E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_01215 7685c1ebfaa0e24fafa8fb212a25f76d 569 Pfam PF00672 HAMP domain 221 269 1.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_01215 7685c1ebfaa0e24fafa8fb212a25f76d 569 Pfam PF02203 Tar ligand binding domain homologue 3 181 5.0E-18 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 C3497_14610 bb6b9fd03d2e8c8c92a6783b2ff9b54c 152 SUPERFAMILY SSF46626 49 146 7.02E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_14610 bb6b9fd03d2e8c8c92a6783b2ff9b54c 152 PRINTS PR00607 Class IE cytochrome C signature 113 125 8.1E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C3497_14610 bb6b9fd03d2e8c8c92a6783b2ff9b54c 152 PRINTS PR00607 Class IE cytochrome C signature 74 85 8.1E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C3497_14610 bb6b9fd03d2e8c8c92a6783b2ff9b54c 152 PRINTS PR00607 Class IE cytochrome C signature 85 95 8.1E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C3497_14610 bb6b9fd03d2e8c8c92a6783b2ff9b54c 152 PRINTS PR00607 Class IE cytochrome C signature 128 139 8.1E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C3497_14610 bb6b9fd03d2e8c8c92a6783b2ff9b54c 152 Gene3D G3DSA:1.10.760.10 63 142 9.6E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_14610 bb6b9fd03d2e8c8c92a6783b2ff9b54c 152 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 65 138 7.6E-17 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01455 f89688e47c7d9ae3bd2e4e5398d93ee8 180 SUPERFAMILY SSF51182 1 178 1.16E-80 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C3497_01455 f89688e47c7d9ae3bd2e4e5398d93ee8 180 Gene3D G3DSA:2.60.120.10 1 180 3.5E-75 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_01455 f89688e47c7d9ae3bd2e4e5398d93ee8 180 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 178 1.0E-81 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 C3497_01455 f89688e47c7d9ae3bd2e4e5398d93ee8 180 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 6.0E-74 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 C3497_01455 f89688e47c7d9ae3bd2e4e5398d93ee8 180 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 2.3E-76 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 C3497_00375 f212f33def8f1820d88cd12a041a45a7 374 Pfam PF13286 Phosphohydrolase-associated domain 281 366 8.4E-29 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain C3497_00375 f212f33def8f1820d88cd12a041a45a7 374 SUPERFAMILY SSF109604 15 368 2.72E-92 T 14-10-2018 C3497_00375 f212f33def8f1820d88cd12a041a45a7 374 Gene3D G3DSA:1.10.3210.10 1 369 1.6E-134 T 14-10-2018 C3497_00375 f212f33def8f1820d88cd12a041a45a7 374 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 4 368 38.738 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 C3497_00375 f212f33def8f1820d88cd12a041a45a7 374 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 161 1.9E-57 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 C3497_00375 f212f33def8f1820d88cd12a041a45a7 374 SMART SM00471 60 204 1.6E-11 T 14-10-2018 IPR003607 HD/PDEase domain C3497_00375 f212f33def8f1820d88cd12a041a45a7 374 Pfam PF01966 HD domain 64 194 3.3E-15 T 14-10-2018 IPR006674 HD domain C3497_11145 3d0794dd1010097e4496a0133a984c70 123 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 20 112 3.8E-34 T 14-10-2018 IPR019110 Uncharacterised protein family, RAQPRD C3497_11145 3d0794dd1010097e4496a0133a984c70 123 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 35 110 2.2E-29 T 14-10-2018 IPR019110 Uncharacterised protein family, RAQPRD C3497_06710 50b5a15bb76baedd665ce9fc62ec58d4 99 SUPERFAMILY SSF54909 1 97 2.12E-29 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3497_06710 50b5a15bb76baedd665ce9fc62ec58d4 99 Gene3D G3DSA:3.30.70.1060 1 98 1.0E-34 T 14-10-2018 C3497_06710 50b5a15bb76baedd665ce9fc62ec58d4 99 Pfam PF03795 YCII-related domain 1 95 1.8E-25 T 14-10-2018 IPR005545 YCII-related C3497_05125 8614d56600ce3e0e3c98c6b6844133b8 566 Gene3D G3DSA:3.10.310.30 327 454 2.4E-30 T 14-10-2018 C3497_05125 8614d56600ce3e0e3c98c6b6844133b8 566 SUPERFAMILY SSF64182 51 460 1.26E-114 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily C3497_05125 8614d56600ce3e0e3c98c6b6844133b8 566 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 26 562 4.3E-135 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 C3497_05125 8614d56600ce3e0e3c98c6b6844133b8 566 Gene3D G3DSA:2.40.50.460 479 566 1.9E-7 T 14-10-2018 C3497_05125 8614d56600ce3e0e3c98c6b6844133b8 566 Pfam PF01368 DHH family 78 213 5.5E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_05125 8614d56600ce3e0e3c98c6b6844133b8 566 Pfam PF02272 DHHA1 domain 322 450 6.5E-24 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 C3497_05125 8614d56600ce3e0e3c98c6b6844133b8 566 Gene3D G3DSA:3.90.1640.30 52 326 9.8E-86 T 14-10-2018 C3497_00270 55d935939c4a6cef880353fa14f78232 185 SUPERFAMILY SSF64288 8 180 5.89E-44 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C3497_00270 55d935939c4a6cef880353fa14f78232 185 Pfam PF04345 Chorismate lyase 5 179 5.9E-28 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 C3497_00270 55d935939c4a6cef880353fa14f78232 185 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 8 183 27.37 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 C3497_00270 55d935939c4a6cef880353fa14f78232 185 Gene3D G3DSA:3.40.1410.10 3 181 5.2E-47 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C3497_11095 9bc44fb99f91ca63ff1eb518bc04e429 664 Pfam PF08665 PglZ domain 400 571 2.8E-23 T 14-10-2018 IPR013973 PglZ domain C3497_11095 9bc44fb99f91ca63ff1eb518bc04e429 664 SUPERFAMILY SSF53649 400 659 4.58E-5 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 C3497_12320 e53dc640807151ff40777f161c8e6fe3 620 Gene3D G3DSA:3.90.550.10 508 620 2.6E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_12320 e53dc640807151ff40777f161c8e6fe3 620 SUPERFAMILY SSF53448 511 618 2.72E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_12320 e53dc640807151ff40777f161c8e6fe3 620 Pfam PF00535 Glycosyl transferase family 2 514 616 2.2E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3497_12320 e53dc640807151ff40777f161c8e6fe3 620 SUPERFAMILY SSF53335 30 192 5.33E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_12320 e53dc640807151ff40777f161c8e6fe3 620 Pfam PF13489 Methyltransferase domain 31 180 1.4E-17 T 14-10-2018 C3497_12320 e53dc640807151ff40777f161c8e6fe3 620 Gene3D G3DSA:3.40.50.150 29 229 1.1E-37 T 14-10-2018 C3497_07595 4ea2004e2073801d307a32f85d92919e 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 1.4E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_07595 4ea2004e2073801d307a32f85d92919e 144 Pfam PF08334 Type II secretion system (T2SS), protein G 35 142 3.9E-40 T 14-10-2018 IPR013545 Type II secretion system protein G C3497_07595 4ea2004e2073801d307a32f85d92919e 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_07595 4ea2004e2073801d307a32f85d92919e 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 11 143 7.3E-56 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 C3497_07595 4ea2004e2073801d307a32f85d92919e 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 3.7E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_07595 4ea2004e2073801d307a32f85d92919e 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 9.5E-18 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3497_07595 4ea2004e2073801d307a32f85d92919e 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 9.5E-18 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3497_07595 4ea2004e2073801d307a32f85d92919e 144 Gene3D G3DSA:3.30.700.10 37 142 4.9E-38 T 14-10-2018 C3497_07595 4ea2004e2073801d307a32f85d92919e 144 SUPERFAMILY SSF54523 39 142 4.97E-37 T 14-10-2018 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 SMART SM00388 620 685 1.9E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 SUPERFAMILY SSF55874 674 845 6.81E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 SUPERFAMILY SSF47384 606 687 1.39E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 732 841 5.4E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 Pfam PF00512 His Kinase A (phospho-acceptor) domain 620 685 2.8E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 Gene3D G3DSA:1.20.1480.50 515 609 1.9E-11 T 14-10-2018 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 Gene3D G3DSA:3.30.565.10 687 846 1.9E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 Gene3D G3DSA:1.10.287.130 610 686 2.1E-26 T 14-10-2018 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 SUPERFAMILY SSF158472 554 602 6.15E-8 T 14-10-2018 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 PRINTS PR00344 Bacterial sensor protein C-terminal signature 786 796 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 PRINTS PR00344 Bacterial sensor protein C-terminal signature 827 840 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 PRINTS PR00344 Bacterial sensor protein C-terminal signature 803 821 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 PRINTS PR00344 Bacterial sensor protein C-terminal signature 768 782 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 SMART SM00304 553 605 4.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 Pfam PF00672 HAMP domain 555 599 8.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 SUPERFAMILY SSF103190 181 318 2.24E-8 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily C3497_09025 d38804d6613850c7f5a10beda26f9af9 853 SMART SM00387 732 843 6.2E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 Gene3D G3DSA:3.90.1170.10 1 136 1.3E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.0E-59 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.1E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.1E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.1E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.1E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.462 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 SUPERFAMILY SSF54686 1 134 7.33E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 C3497_01895 4b0056cce6c8fd8eb3aa2ef413085fe7 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.1E-49 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 C3497_10025 de59d73c02160f82f83b36aed8d6295e 87 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 7 49 7.8E-22 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type C3497_10025 de59d73c02160f82f83b36aed8d6295e 87 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 7 50 2.3E-18 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type C3497_12925 e341b8ef2db9576602271a10730a3436 521 Gene3D G3DSA:3.30.565.10 378 519 2.5E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_12925 e341b8ef2db9576602271a10730a3436 521 Pfam PF13188 PAS domain 200 232 1.4E-5 T 14-10-2018 IPR000014 PAS domain C3497_12925 e341b8ef2db9576602271a10730a3436 521 SUPERFAMILY SSF55874 397 515 2.62E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_12925 e341b8ef2db9576602271a10730a3436 521 Pfam PF00512 His Kinase A (phospho-acceptor) domain 308 372 8.6E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_12925 e341b8ef2db9576602271a10730a3436 521 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 504 3.9E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_12925 e341b8ef2db9576602271a10730a3436 521 SUPERFAMILY SSF47384 299 371 1.14E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_12925 e341b8ef2db9576602271a10730a3436 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 2.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_12925 e341b8ef2db9576602271a10730a3436 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 2.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_12925 e341b8ef2db9576602271a10730a3436 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 2.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_12925 e341b8ef2db9576602271a10730a3436 521 SUPERFAMILY SSF55785 189 268 1.62E-7 T 14-10-2018 IPR035965 PAS domain superfamily C3497_12925 e341b8ef2db9576602271a10730a3436 521 SMART SM00387 414 521 1.7E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_12925 e341b8ef2db9576602271a10730a3436 521 Gene3D G3DSA:1.10.287.130 296 371 1.9E-17 T 14-10-2018 C3497_12925 e341b8ef2db9576602271a10730a3436 521 Gene3D G3DSA:3.30.450.20 191 248 9.8E-7 T 14-10-2018 C3497_12925 e341b8ef2db9576602271a10730a3436 521 SMART SM00388 308 373 6.2E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_14460 ec9377dcf897758e47493bddfa2a11a7 316 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 298 36.752 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 C3497_14460 ec9377dcf897758e47493bddfa2a11a7 316 Pfam PF04381 Putative exonuclease, RdgC 1 296 3.5E-120 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 C3497_08295 e6742b0571a5bab609014b38ad805d02 367 Pfam PF01594 AI-2E family transporter 13 342 8.9E-61 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like C3497_11880 e7930963f11982d7e989d17c6e9d9530 804 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 1 773 18.714 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 C3497_11880 e7930963f11982d7e989d17c6e9d9530 804 Pfam PF04453 Organic solvent tolerance protein 344 713 2.8E-89 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 C3497_11880 e7930963f11982d7e989d17c6e9d9530 804 Pfam PF03968 OstA-like protein 122 237 2.0E-7 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal C3497_06500 6a8312aac40dea07500e86e550ff311c 69 SUPERFAMILY SSF50249 4 68 2.79E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_06500 6a8312aac40dea07500e86e550ff311c 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 14-10-2018 IPR019844 Cold-shock conserved site C3497_06500 6a8312aac40dea07500e86e550ff311c 69 SMART SM00357 5 69 7.7E-32 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C3497_06500 6a8312aac40dea07500e86e550ff311c 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.2E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3497_06500 6a8312aac40dea07500e86e550ff311c 69 PIRSF PIRSF002599 1 69 1.8E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 C3497_06500 6a8312aac40dea07500e86e550ff311c 69 PRINTS PR00050 Cold shock protein signature 27 36 5.4E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3497_06500 6a8312aac40dea07500e86e550ff311c 69 PRINTS PR00050 Cold shock protein signature 42 60 5.4E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3497_06500 6a8312aac40dea07500e86e550ff311c 69 PRINTS PR00050 Cold shock protein signature 6 21 5.4E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3497_06500 6a8312aac40dea07500e86e550ff311c 69 Gene3D G3DSA:2.40.50.140 4 68 2.5E-29 T 14-10-2018 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 118 145 4.4E-54 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 4.4E-54 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 242 264 4.4E-54 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 264 289 4.4E-54 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 96 118 4.4E-54 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 PIRSF PIRSF036480 4 291 2.9E-112 T 14-10-2018 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 SUPERFAMILY SSF53328 95 291 1.44E-62 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 290 47.317 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 SUPERFAMILY SSF55021 6 91 1.83E-15 T 14-10-2018 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 290 1.3E-105 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 Pfam PF00551 Formyl transferase 95 270 1.8E-39 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 Gene3D G3DSA:3.30.70.260 3 94 5.1E-24 T 14-10-2018 C3497_14185 f3ddd7eb2e20a6660c84a9cfe18ff727 291 Gene3D G3DSA:3.40.50.170 95 291 5.5E-75 T 14-10-2018 C3497_05205 983e0a67fc6115e78e9965cfadc56b86 126 Pfam PF11162 Protein of unknown function (DUF2946) 13 123 5.8E-10 T 14-10-2018 IPR021333 Protein of unknown function DUF2946 C3497_06780 8d976b29b5cdd9c68232db5d343ed1eb 245 SUPERFAMILY SSF53167 1 243 1.2E-79 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 C3497_06780 8d976b29b5cdd9c68232db5d343ed1eb 245 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 1 243 9.8E-84 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 C3497_06780 8d976b29b5cdd9c68232db5d343ed1eb 245 Gene3D G3DSA:3.40.50.1580 1 245 6.8E-80 T 14-10-2018 C3497_06780 8d976b29b5cdd9c68232db5d343ed1eb 245 Pfam PF01048 Phosphorylase superfamily 2 239 3.1E-47 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 C3497_06780 8d976b29b5cdd9c68232db5d343ed1eb 245 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 1 245 32.203 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 C3497_02960 8ef93e572a2927d4612da4f8d0726559 422 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 288 397 3.1E-43 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C3497_02960 8ef93e572a2927d4612da4f8d0726559 422 Pfam PF00033 Cytochrome b/b6/petB 27 222 1.1E-63 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C3497_02960 8ef93e572a2927d4612da4f8d0726559 422 SUPERFAMILY SSF81342 10 290 6.75E-96 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C3497_02960 8ef93e572a2927d4612da4f8d0726559 422 Gene3D G3DSA:1.20.810.10 1 422 1.1E-159 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 C3497_02960 8ef93e572a2927d4612da4f8d0726559 422 SUPERFAMILY SSF81648 291 414 2.45E-29 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C3497_02960 8ef93e572a2927d4612da4f8d0726559 422 PIRSF PIRSF038885 1 422 3.4E-155 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 C3497_12645 96d2cbd359fb07d5d563a8024222a604 265 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 16.748 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 C3497_12645 96d2cbd359fb07d5d563a8024222a604 265 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 5.3E-71 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 C3497_12645 96d2cbd359fb07d5d563a8024222a604 265 Pfam PF02673 Bacitracin resistance protein BacA 7 258 4.2E-81 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 C3497_05405 25799d0e356447a19fb42e1606ade098 695 Hamap MF_00204 UvrABC system protein B [uvrB]. 24 685 43.913 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 C3497_05405 25799d0e356447a19fb42e1606ade098 695 SUPERFAMILY SSF52540 25 435 4.54E-133 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05405 25799d0e356447a19fb42e1606ade098 695 SMART SM00490 480 566 1.8E-19 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_05405 25799d0e356447a19fb42e1606ade098 695 SMART SM00487 30 445 1.7E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_05405 25799d0e356447a19fb42e1606ade098 695 Gene3D G3DSA:3.40.50.300 17 259 2.5E-72 T 14-10-2018 C3497_05405 25799d0e356447a19fb42e1606ade098 695 SUPERFAMILY SSF52540 58 600 3.41E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05405 25799d0e356447a19fb42e1606ade098 695 Gene3D G3DSA:3.40.50.300 435 616 2.6E-51 T 14-10-2018 C3497_05405 25799d0e356447a19fb42e1606ade098 695 Pfam PF12344 Ultra-violet resistance protein B 572 614 1.2E-22 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain C3497_05405 25799d0e356447a19fb42e1606ade098 695 Gene3D G3DSA:3.40.50.300 290 434 6.8E-53 T 14-10-2018 C3497_05405 25799d0e356447a19fb42e1606ade098 695 SUPERFAMILY SSF46600 640 686 4.84E-11 T 14-10-2018 IPR036876 UVR domain superfamily C3497_05405 25799d0e356447a19fb42e1606ade098 695 Pfam PF00271 Helicase conserved C-terminal domain 461 565 3.4E-19 T 14-10-2018 IPR001650 Helicase, C-terminal C3497_05405 25799d0e356447a19fb42e1606ade098 695 Gene3D G3DSA:4.10.860.10 635 690 5.9E-18 T 14-10-2018 C3497_05405 25799d0e356447a19fb42e1606ade098 695 Pfam PF04851 Type III restriction enzyme, res subunit 38 159 1.2E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C3497_05405 25799d0e356447a19fb42e1606ade098 695 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 26 683 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 C3497_05405 25799d0e356447a19fb42e1606ade098 695 Pfam PF02151 UvrB/uvrC motif 652 684 4.0E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 C3497_09115 5405232f85a31e1d2a891e4c02a6f2cb 154 Pfam PF07690 Major Facilitator Superfamily 1 138 1.6E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_09115 5405232f85a31e1d2a891e4c02a6f2cb 154 SUPERFAMILY SSF103473 2 147 1.83E-15 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_09115 5405232f85a31e1d2a891e4c02a6f2cb 154 Gene3D G3DSA:1.20.1250.20 1 144 5.5E-17 T 14-10-2018 C3497_00880 f0ba8216d21d31dc70e09847b1debeb2 149 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 5 136 21.275 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 C3497_00880 f0ba8216d21d31dc70e09847b1debeb2 149 Pfam PF01029 NusB family 8 132 2.7E-31 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 C3497_00880 f0ba8216d21d31dc70e09847b1debeb2 149 Gene3D G3DSA:1.10.940.10 2 140 4.5E-42 T 14-10-2018 IPR035926 NusB-like superfamily C3497_00880 f0ba8216d21d31dc70e09847b1debeb2 149 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 134 7.4E-40 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 C3497_00880 f0ba8216d21d31dc70e09847b1debeb2 149 SUPERFAMILY SSF48013 4 136 2.35E-40 T 14-10-2018 IPR035926 NusB-like superfamily C3497_14335 3c4bde492b56829e4ba50ffe7ae22a33 300 Gene3D G3DSA:3.30.420.40 5 296 6.3E-83 T 14-10-2018 C3497_14335 3c4bde492b56829e4ba50ffe7ae22a33 300 Pfam PF00480 ROK family 4 298 7.0E-72 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 C3497_14335 3c4bde492b56829e4ba50ffe7ae22a33 300 ProSitePatterns PS01125 ROK family signature. 133 160 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 C3497_14335 3c4bde492b56829e4ba50ffe7ae22a33 300 Gene3D G3DSA:3.30.420.40 122 289 6.3E-83 T 14-10-2018 C3497_14335 3c4bde492b56829e4ba50ffe7ae22a33 300 SUPERFAMILY SSF53067 1 299 2.7E-62 T 14-10-2018 C3497_04460 4eda9f4a6fdfaa8ae39e758a80a701db 110 PIRSF PIRSF019883 1 104 1.0E-32 T 14-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane C3497_04460 4eda9f4a6fdfaa8ae39e758a80a701db 110 Pfam PF10993 Protein of unknown function (DUF2818) 8 99 3.0E-33 T 14-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 SUPERFAMILY SSF48452 397 563 4.61E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 Gene3D G3DSA:1.25.40.10 356 575 5.0E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 Gene3D G3DSA:1.25.40.10 38 355 8.1E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 Pfam PF13432 Tetratricopeptide repeat 398 445 0.0038 T 14-10-2018 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 Pfam PF13432 Tetratricopeptide repeat 300 353 2.7E-7 T 14-10-2018 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 Pfam PF13432 Tetratricopeptide repeat 504 561 1.4E-4 T 14-10-2018 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 Pfam PF13432 Tetratricopeptide repeat 164 222 0.0013 T 14-10-2018 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 SMART SM00028 462 496 57.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 SMART SM00028 530 563 25.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 SMART SM00028 292 325 83.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 SMART SM00028 190 223 8.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_02560 97f2ce7abc88536a53584893f313dc9e 575 SUPERFAMILY SSF48452 115 352 1.18E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_07825 50803c3450da21f7b87d58c9e317765b 375 SUPERFAMILY SSF56935 21 375 1.01E-61 T 14-10-2018 C3497_07825 50803c3450da21f7b87d58c9e317765b 375 Gene3D G3DSA:2.40.160.10 21 375 3.4E-75 T 14-10-2018 IPR023614 Porin domain superfamily C3497_07825 50803c3450da21f7b87d58c9e317765b 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 7.0E-8 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 C3497_07825 50803c3450da21f7b87d58c9e317765b 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 7.0E-8 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 C3497_07825 50803c3450da21f7b87d58c9e317765b 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 7.0E-8 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 C3497_07825 50803c3450da21f7b87d58c9e317765b 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 319 336 7.0E-8 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 C3497_07825 50803c3450da21f7b87d58c9e317765b 375 PRINTS PR00184 Neisseria sp. porin signature 56 81 8.0E-9 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 C3497_07825 50803c3450da21f7b87d58c9e317765b 375 PRINTS PR00184 Neisseria sp. porin signature 151 168 8.0E-9 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 C3497_07825 50803c3450da21f7b87d58c9e317765b 375 PRINTS PR00184 Neisseria sp. porin signature 282 306 8.0E-9 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 C3497_07825 50803c3450da21f7b87d58c9e317765b 375 Pfam PF13609 Gram-negative porin 7 345 9.1E-55 T 14-10-2018 C3497_01255 dfbaba507d3ab4970d1c00f9f003e1e3 106 Gene3D G3DSA:3.30.110.70 2 106 2.9E-43 T 14-10-2018 C3497_01255 dfbaba507d3ab4970d1c00f9f003e1e3 106 SUPERFAMILY SSF117782 1 105 2.22E-38 T 14-10-2018 IPR035439 UPF0145 domain superfamily C3497_01255 dfbaba507d3ab4970d1c00f9f003e1e3 106 Pfam PF01906 Putative heavy-metal-binding 1 104 3.8E-40 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 C3497_01255 dfbaba507d3ab4970d1c00f9f003e1e3 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.862 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 C3497_14615 3ee2b457bbb61e975d876f90fac1e026 661 Gene3D G3DSA:1.10.10.160 107 182 7.8E-93 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily C3497_14615 3ee2b457bbb61e975d876f90fac1e026 661 SUPERFAMILY SSF52540 5 629 8.29E-166 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14615 3ee2b457bbb61e975d876f90fac1e026 661 Gene3D G3DSA:3.40.50.300 5 266 7.8E-93 T 14-10-2018 C3497_14615 3ee2b457bbb61e975d876f90fac1e026 661 Pfam PF13361 UvrD-like helicase C-terminal domain 270 606 1.5E-67 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C3497_14615 3ee2b457bbb61e975d876f90fac1e026 661 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 118 3.8E-32 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C3497_14615 3ee2b457bbb61e975d876f90fac1e026 661 Pfam PF00580 UvrD/REP helicase N-terminal domain 123 264 4.5E-38 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C3497_14615 3ee2b457bbb61e975d876f90fac1e026 661 Gene3D G3DSA:3.40.50.300 273 625 1.8E-117 T 14-10-2018 C3497_14615 3ee2b457bbb61e975d876f90fac1e026 661 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 3 658 38.14 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 C3497_14615 3ee2b457bbb61e975d876f90fac1e026 661 Gene3D G3DSA:1.10.486.10 376 537 1.8E-117 T 14-10-2018 C3497_14540 496d412f18d4a1f37e26d8b941a7ac12 87 Gene3D G3DSA:3.90.1150.10 1 85 7.0E-29 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_14540 496d412f18d4a1f37e26d8b941a7ac12 87 SUPERFAMILY SSF53383 2 81 7.6E-18 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_02585 88cf005856789c0725281e1245848f99 179 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3497_02585 88cf005856789c0725281e1245848f99 179 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 174 5.3E-43 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 C3497_02585 88cf005856789c0725281e1245848f99 179 Pfam PF03602 Conserved hypothetical protein 95 4 174 1.4E-48 T 14-10-2018 C3497_02585 88cf005856789c0725281e1245848f99 179 Gene3D G3DSA:3.40.50.150 1 177 4.0E-53 T 14-10-2018 C3497_02585 88cf005856789c0725281e1245848f99 179 SUPERFAMILY SSF53335 4 174 3.66E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_02585 88cf005856789c0725281e1245848f99 179 PIRSF PIRSF004553 3 177 9.2E-45 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 C3497_05400 4e7b01244376947bc870b32e13ea671e 402 Gene3D G3DSA:3.40.640.10 64 304 8.6E-163 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_05400 4e7b01244376947bc870b32e13ea671e 402 SUPERFAMILY SSF53383 3 401 5.62E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_05400 4e7b01244376947bc870b32e13ea671e 402 Gene3D G3DSA:3.90.1150.10 9 396 8.6E-163 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_05400 4e7b01244376947bc870b32e13ea671e 402 Pfam PF00155 Aminotransferase class I and II 31 396 1.9E-79 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_05400 4e7b01244376947bc870b32e13ea671e 402 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 247 260 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 C3497_05400 4e7b01244376947bc870b32e13ea671e 402 PRINTS PR00799 Aspartate aminotransferase signature 345 363 5.0E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 C3497_05400 4e7b01244376947bc870b32e13ea671e 402 PRINTS PR00799 Aspartate aminotransferase signature 210 222 5.0E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 C3497_05400 4e7b01244376947bc870b32e13ea671e 402 PRINTS PR00799 Aspartate aminotransferase signature 179 198 5.0E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 C3497_05400 4e7b01244376947bc870b32e13ea671e 402 PRINTS PR00799 Aspartate aminotransferase signature 277 302 5.0E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 C3497_12195 3f3df737c03c4be7c06580c1073b5400 286 PIRSF PIRSF005917 4 286 1.4E-93 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 C3497_12195 3f3df737c03c4be7c06580c1073b5400 286 SUPERFAMILY SSF53790 12 232 7.33E-73 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3497_12195 3f3df737c03c4be7c06580c1073b5400 286 Gene3D G3DSA:3.30.950.10 121 239 5.3E-37 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3497_12195 3f3df737c03c4be7c06580c1073b5400 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 C3497_12195 3f3df737c03c4be7c06580c1073b5400 286 Gene3D G3DSA:3.40.1010.10 2 120 8.1E-38 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3497_12195 3f3df737c03c4be7c06580c1073b5400 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 281 1.1E-74 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 C3497_12195 3f3df737c03c4be7c06580c1073b5400 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 3.9E-26 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3497_12195 3f3df737c03c4be7c06580c1073b5400 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 34.295 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 C3497_06975 e16c2a3b6ef92d2ae330999cefdc5231 925 Gene3D G3DSA:3.40.50.300 395 598 1.4E-6 T 14-10-2018 C3497_06975 e16c2a3b6ef92d2ae330999cefdc5231 925 Pfam PF04851 Type III restriction enzyme, res subunit 59 270 2.5E-14 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C3497_06975 e16c2a3b6ef92d2ae330999cefdc5231 925 SUPERFAMILY SSF52540 10 290 1.22E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06975 e16c2a3b6ef92d2ae330999cefdc5231 925 SMART SM00487 61 294 0.0093 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 SUPERFAMILY SSF50465 304 396 2.04E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 Gene3D G3DSA:2.40.30.10 208 336 1.6E-53 T 14-10-2018 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 4.3E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 SUPERFAMILY SSF50447 207 303 2.16E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 Gene3D G3DSA:2.40.30.10 340 395 3.6E-29 T 14-10-2018 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 7.7E-235 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 9.5E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 Gene3D G3DSA:3.40.50.300 1 205 1.3E-72 T 14-10-2018 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.5E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 SUPERFAMILY SSF52540 5 221 1.84E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 61.534 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3497_01785 55db4fc7722f2164542e7af0d42dd3c2 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.8E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 SUPERFAMILY SSF50465 304 396 2.04E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 Gene3D G3DSA:2.40.30.10 208 336 1.6E-53 T 14-10-2018 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 4.3E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 SUPERFAMILY SSF50447 207 303 2.16E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 Gene3D G3DSA:2.40.30.10 340 395 3.6E-29 T 14-10-2018 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 7.7E-235 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 9.5E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 Gene3D G3DSA:3.40.50.300 1 205 1.3E-72 T 14-10-2018 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.5E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 SUPERFAMILY SSF52540 5 221 1.84E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 61.534 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3497_01850 55db4fc7722f2164542e7af0d42dd3c2 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.8E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal C3497_03290 6162dcc61431430bbb9b8698dcd5a89f 159 SUPERFAMILY SSF89562 3 158 1.31E-51 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily C3497_03290 6162dcc61431430bbb9b8698dcd5a89f 159 Gene3D G3DSA:3.50.30.40 1 159 2.4E-68 T 14-10-2018 C3497_03290 6162dcc61431430bbb9b8698dcd5a89f 159 Pfam PF03737 Aldolase/RraA 5 153 1.5E-45 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein C3497_03290 6162dcc61431430bbb9b8698dcd5a89f 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.2E-66 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 C3497_01815 5c487ddc85fa6d76ce21a10a2ef2769f 167 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 27.838 T 14-10-2018 IPR022973 Ribosomal protein L10 C3497_01815 5c487ddc85fa6d76ce21a10a2ef2769f 167 Gene3D G3DSA:3.30.70.1730 5 133 6.8E-34 T 14-10-2018 C3497_01815 5c487ddc85fa6d76ce21a10a2ef2769f 167 Pfam PF00466 Ribosomal protein L10 6 100 2.2E-23 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 C3497_01815 5c487ddc85fa6d76ce21a10a2ef2769f 167 SUPERFAMILY SSF160369 4 159 2.09E-50 T 14-10-2018 C3497_06105 b2f883fd56093251bd4259a810a11f15 121 Gene3D G3DSA:2.40.10.220 5 121 5.5E-45 T 14-10-2018 C3497_06105 b2f883fd56093251bd4259a810a11f15 121 Pfam PF07238 PilZ domain 18 96 6.2E-8 T 14-10-2018 IPR009875 PilZ domain GO:0035438 C3497_07175 53cce381001ae4b7fae4ec864ad716cd 126 SMART SM00448 6 118 3.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_07175 53cce381001ae4b7fae4ec864ad716cd 126 SUPERFAMILY SSF52172 6 123 6.12E-37 T 14-10-2018 IPR011006 CheY-like superfamily C3497_07175 53cce381001ae4b7fae4ec864ad716cd 126 Pfam PF00072 Response regulator receiver domain 9 118 1.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_07175 53cce381001ae4b7fae4ec864ad716cd 126 Gene3D G3DSA:3.40.50.2300 2 125 2.3E-35 T 14-10-2018 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 PRINTS PR00094 Adenylate kinase signature 173 187 7.4E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 PRINTS PR00094 Adenylate kinase signature 32 46 7.4E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 PRINTS PR00094 Adenylate kinase signature 81 97 7.4E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 PRINTS PR00094 Adenylate kinase signature 4 17 7.4E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 PRINTS PR00094 Adenylate kinase signature 156 171 7.4E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 Hamap MF_00235 Adenylate kinase [adk]. 1 217 54.021 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 Gene3D G3DSA:3.40.50.300 1 217 3.0E-78 T 14-10-2018 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 SUPERFAMILY SSF52540 1 214 5.33E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06645 b98287594844e51e9461b8442ed08dd3 217 Pfam PF00406 Adenylate kinase 5 184 1.2E-57 T 14-10-2018 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 215 4.8E-74 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 C3497_06645 b98287594844e51e9461b8442ed08dd3 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 3.5E-17 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 C3497_03920 6482d92e4d54ff6c475d809d02aba1c4 248 Gene3D G3DSA:3.60.140.10 1 248 9.5E-98 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily C3497_03920 6482d92e4d54ff6c475d809d02aba1c4 248 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 245 2.1E-82 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase C3497_03920 6482d92e4d54ff6c475d809d02aba1c4 248 SUPERFAMILY SSF64438 5 246 2.75E-87 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic C3497_03920 6482d92e4d54ff6c475d809d02aba1c4 248 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 246 2.4E-58 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase C3497_13295 64ba84b98c52cc192aceb59aca15b30e 81 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13295 64ba84b98c52cc192aceb59aca15b30e 81 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13295 64ba84b98c52cc192aceb59aca15b30e 81 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13295 64ba84b98c52cc192aceb59aca15b30e 81 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13295 64ba84b98c52cc192aceb59aca15b30e 81 SUPERFAMILY SSF81333 3 78 4.18E-20 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily C3497_13295 64ba84b98c52cc192aceb59aca15b30e 81 Gene3D G3DSA:1.20.20.10 1 77 3.1E-28 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13295 64ba84b98c52cc192aceb59aca15b30e 81 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 4.6E-22 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 C3497_13295 64ba84b98c52cc192aceb59aca15b30e 81 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 14.561 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13295 64ba84b98c52cc192aceb59aca15b30e 81 Pfam PF00137 ATP synthase subunit C 10 72 2.8E-12 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 C3497_07165 bd48b43f92b0667e960f5d18aff9d250 245 Pfam PF08241 Methyltransferase domain 67 116 1.5E-8 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C3497_07165 bd48b43f92b0667e960f5d18aff9d250 245 Gene3D G3DSA:3.40.50.150 28 182 9.8E-19 T 14-10-2018 C3497_07165 bd48b43f92b0667e960f5d18aff9d250 245 SUPERFAMILY SSF53335 64 204 4.13E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_00010 73e971f26e4c50c8283d6d58ac05e920 230 PIRSF PIRSF006293 3 229 2.5E-78 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C3497_00010 73e971f26e4c50c8283d6d58ac05e920 230 SUPERFAMILY SSF52402 6 225 1.04E-65 T 14-10-2018 C3497_00010 73e971f26e4c50c8283d6d58ac05e920 230 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 5 223 55.794 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C3497_00010 73e971f26e4c50c8283d6d58ac05e920 230 Pfam PF06508 Queuosine biosynthesis protein QueC 6 217 7.4E-78 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C3497_00010 73e971f26e4c50c8283d6d58ac05e920 230 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 7 210 4.6E-61 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C3497_00010 73e971f26e4c50c8283d6d58ac05e920 230 Gene3D G3DSA:3.40.50.620 5 225 3.7E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_06675 d8371beaa2e59cc0252b271e8c52adcf 309 Gene3D G3DSA:3.40.50.620 2 182 1.9E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_06675 d8371beaa2e59cc0252b271e8c52adcf 309 SUPERFAMILY SSF52402 3 183 5.65E-56 T 14-10-2018 C3497_06675 d8371beaa2e59cc0252b271e8c52adcf 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 C3497_06675 d8371beaa2e59cc0252b271e8c52adcf 309 Gene3D G3DSA:3.40.50.1220 183 309 5.5E-58 T 14-10-2018 C3497_06675 d8371beaa2e59cc0252b271e8c52adcf 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 272 9.7E-35 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 C3497_06675 d8371beaa2e59cc0252b271e8c52adcf 309 PIRSF PIRSF000089 1 309 1.1E-109 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 C3497_06675 d8371beaa2e59cc0252b271e8c52adcf 309 Pfam PF01012 Electron transfer flavoprotein domain 4 168 1.6E-40 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C3497_06675 d8371beaa2e59cc0252b271e8c52adcf 309 SMART SM00893 3 181 1.6E-56 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C3497_06675 d8371beaa2e59cc0252b271e8c52adcf 309 SUPERFAMILY SSF52467 186 309 8.36E-48 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C3497_07540 c93e51b317104c0f035c22e477384f60 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 8.5E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C3497_07540 c93e51b317104c0f035c22e477384f60 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 8.5E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C3497_07540 c93e51b317104c0f035c22e477384f60 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 8.5E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C3497_07540 c93e51b317104c0f035c22e477384f60 400 Pfam PF00579 tRNA synthetases class I (W and Y) 244 322 2.8E-11 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_07540 c93e51b317104c0f035c22e477384f60 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 4.6E-49 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_07540 c93e51b317104c0f035c22e477384f60 400 Gene3D G3DSA:3.40.50.620 3 229 2.4E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_07540 c93e51b317104c0f035c22e477384f60 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 35.367 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 C3497_07540 c93e51b317104c0f035c22e477384f60 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 173 2.7E-58 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C3497_07540 c93e51b317104c0f035c22e477384f60 400 SUPERFAMILY SSF52374 5 397 5.4E-89 T 14-10-2018 C3497_07540 c93e51b317104c0f035c22e477384f60 400 Gene3D G3DSA:1.10.240.10 260 365 2.1E-37 T 14-10-2018 C3497_07540 c93e51b317104c0f035c22e477384f60 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3497_02625 7e5cae03c7618c616dbfa367d92dc089 623 Pfam PF00664 ABC transporter transmembrane region 43 243 4.2E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C3497_02625 7e5cae03c7618c616dbfa367d92dc089 623 Gene3D G3DSA:1.20.1560.10 7 350 1.6E-21 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3497_02625 7e5cae03c7618c616dbfa367d92dc089 623 Gene3D G3DSA:3.40.50.300 351 608 4.4E-89 T 14-10-2018 C3497_02625 7e5cae03c7618c616dbfa367d92dc089 623 Pfam PF00005 ABC transporter 382 535 7.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_02625 7e5cae03c7618c616dbfa367d92dc089 623 SMART SM00382 390 581 3.0E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_02625 7e5cae03c7618c616dbfa367d92dc089 623 SUPERFAMILY SSF52540 353 605 1.43E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02625 7e5cae03c7618c616dbfa367d92dc089 623 SUPERFAMILY SSF90123 20 342 2.09E-46 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3497_02625 7e5cae03c7618c616dbfa367d92dc089 623 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_14385 e83ee4b3595b6611d0a3c7e7c4aa92e3 130 Pfam PF02675 S-adenosylmethionine decarboxylase 5 122 4.1E-28 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 C3497_14385 e83ee4b3595b6611d0a3c7e7c4aa92e3 130 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 2 122 6.8E-24 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 C3497_14385 e83ee4b3595b6611d0a3c7e7c4aa92e3 130 Gene3D G3DSA:3.60.90.10 1 129 1.0E-35 T 14-10-2018 C3497_14385 e83ee4b3595b6611d0a3c7e7c4aa92e3 130 SUPERFAMILY SSF56276 3 124 3.88E-28 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 C3497_13135 60fdc1a171b365cde5a4ff4d2f8431dd 87 Pfam PF11489 Altered inheritance of mitochondria protein 21 4 55 6.8E-4 T 14-10-2018 IPR021582 Altered inheritance of mitochondria protein 21 C3497_13135 60fdc1a171b365cde5a4ff4d2f8431dd 87 Pfam PF11943 Protein of unknown function (DUF3460) 29 85 2.4E-26 T 14-10-2018 IPR021853 Protein of unknown function DUF3460 C3497_05815 eeddb42343775b91559973d17a06b075 352 Gene3D G3DSA:3.40.250.10 6 130 1.5E-36 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_05815 eeddb42343775b91559973d17a06b075 352 SUPERFAMILY SSF52821 17 128 9.56E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_05815 eeddb42343775b91559973d17a06b075 352 SMART SM00450 1 130 1.9E-11 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_05815 eeddb42343775b91559973d17a06b075 352 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 14 316 1.6E-107 T 14-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 C3497_05815 eeddb42343775b91559973d17a06b075 352 Pfam PF00581 Rhodanese-like domain 14 125 2.7E-9 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_05815 eeddb42343775b91559973d17a06b075 352 ProSitePatterns PS00380 Rhodanese signature 1. 26 37 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 C3497_05500 3feecfe77f747dd1411d07781c4c8c20 321 PIRSF PIRSF005427 1 321 4.6E-91 T 14-10-2018 IPR005588 MucB/RseB C3497_05500 3feecfe77f747dd1411d07781c4c8c20 321 Pfam PF17188 MucB/RseB C-terminal domain 220 317 2.5E-20 T 14-10-2018 IPR033436 MucB/RseB, C-terminal C3497_05500 3feecfe77f747dd1411d07781c4c8c20 321 Pfam PF03888 MucB/RseB N-terminal domain 26 199 1.6E-60 T 14-10-2018 IPR033434 MucB/RseB, N-terminal C3497_05500 3feecfe77f747dd1411d07781c4c8c20 321 Gene3D G3DSA:3.30.200.100 220 321 5.2E-14 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily C3497_05500 3feecfe77f747dd1411d07781c4c8c20 321 Gene3D G3DSA:2.50.20.10 26 198 4.0E-55 T 14-10-2018 C3497_01070 67c03e5e5643e18586708672ff59f5d7 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 28 144 5.2E-18 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 C3497_01070 67c03e5e5643e18586708672ff59f5d7 155 Gene3D G3DSA:3.10.129.10 9 148 5.5E-36 T 14-10-2018 C3497_01070 67c03e5e5643e18586708672ff59f5d7 155 SUPERFAMILY SSF54637 13 148 1.11E-29 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_01070 67c03e5e5643e18586708672ff59f5d7 155 Pfam PF03061 Thioesterase superfamily 58 131 7.8E-11 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3497_03555 a5e39993b8d0afe57c985c638357ab5c 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 8.2E-15 T 14-10-2018 C3497_03555 a5e39993b8d0afe57c985c638357ab5c 215 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 6 185 4.7E-55 T 14-10-2018 IPR010237 Pyrimidine 5-nucleotidase C3497_03555 a5e39993b8d0afe57c985c638357ab5c 215 Gene3D G3DSA:3.40.50.1000 82 212 1.0E-23 T 14-10-2018 IPR023214 HAD superfamily C3497_03555 a5e39993b8d0afe57c985c638357ab5c 215 SUPERFAMILY SSF56784 6 210 3.67E-34 T 14-10-2018 IPR036412 HAD-like superfamily C3497_03555 a5e39993b8d0afe57c985c638357ab5c 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 186 5.7E-19 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3497_03555 a5e39993b8d0afe57c985c638357ab5c 215 Gene3D G3DSA:1.10.150.450 5 81 2.2E-10 T 14-10-2018 C3497_13195 2c6f31f513fe0dd620bc5b3be8505c51 261 SUPERFAMILY SSF110399 3 245 4.45E-90 T 14-10-2018 C3497_13195 2c6f31f513fe0dd620bc5b3be8505c51 261 Gene3D G3DSA:3.20.20.70 1 260 9.1E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_13195 2c6f31f513fe0dd620bc5b3be8505c51 261 Hamap MF_00443 Thiazole synthase [thiG]. 4 260 42.54 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 C3497_13195 2c6f31f513fe0dd620bc5b3be8505c51 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 7 254 6.2E-107 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 C3497_14730 85480fd8d0aef5adc3f610524e7efe2d 339 SUPERFAMILY SSF54106 34 83 5.1E-7 T 14-10-2018 C3497_14730 85480fd8d0aef5adc3f610524e7efe2d 339 SMART SM00257 35 84 9.8E-6 T 14-10-2018 IPR018392 LysM domain C3497_14730 85480fd8d0aef5adc3f610524e7efe2d 339 Pfam PF01476 LysM domain 36 82 4.0E-13 T 14-10-2018 IPR018392 LysM domain C3497_14730 85480fd8d0aef5adc3f610524e7efe2d 339 Gene3D G3DSA:3.10.350.10 34 81 2.7E-15 T 14-10-2018 IPR036779 LysM domain superfamily C3497_04035 56371df92cd0ccebd1de0e195041d5be 376 Hamap MF_00300 Chorismate synthase [aroC]. 10 351 36.671 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3497_04035 56371df92cd0ccebd1de0e195041d5be 376 Pfam PF01264 Chorismate synthase 10 344 2.6E-137 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3497_04035 56371df92cd0ccebd1de0e195041d5be 376 SUPERFAMILY SSF103263 4 350 2.62E-146 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3497_04035 56371df92cd0ccebd1de0e195041d5be 376 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3497_04035 56371df92cd0ccebd1de0e195041d5be 376 PIRSF PIRSF001456 3 361 1.2E-135 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3497_04035 56371df92cd0ccebd1de0e195041d5be 376 ProSitePatterns PS00789 Chorismate synthase signature 3. 318 334 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3497_04035 56371df92cd0ccebd1de0e195041d5be 376 TIGRFAM TIGR00033 aroC: chorismate synthase 10 349 3.2E-139 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3497_04035 56371df92cd0ccebd1de0e195041d5be 376 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3497_04035 56371df92cd0ccebd1de0e195041d5be 376 Gene3D G3DSA:3.60.150.10 1 362 1.0E-151 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3497_00840 325e894600041ed8a11ec2e19c603617 400 Gene3D G3DSA:3.40.47.10 6 281 8.4E-153 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_00840 325e894600041ed8a11ec2e19c603617 400 Gene3D G3DSA:3.40.47.10 141 397 8.4E-153 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_00840 325e894600041ed8a11ec2e19c603617 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3497_00840 325e894600041ed8a11ec2e19c603617 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 2.7E-46 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3497_00840 325e894600041ed8a11ec2e19c603617 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 C3497_00840 325e894600041ed8a11ec2e19c603617 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 2.0E-223 T 14-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 C3497_00840 325e894600041ed8a11ec2e19c603617 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 4.1E-133 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3497_00840 325e894600041ed8a11ec2e19c603617 400 PIRSF PIRSF000429 1 400 1.6E-128 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3497_00840 325e894600041ed8a11ec2e19c603617 400 SUPERFAMILY SSF53901 3 275 8.02E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_00840 325e894600041ed8a11ec2e19c603617 400 Pfam PF00108 Thiolase, N-terminal domain 4 267 2.7E-72 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3497_00840 325e894600041ed8a11ec2e19c603617 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 C3497_00840 325e894600041ed8a11ec2e19c603617 400 SUPERFAMILY SSF53901 276 399 7.51E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3497_04870 23e53ae39063fe4022f85cb3c7683f30 414 Gene3D G3DSA:3.40.190.10 132 406 3.6E-67 T 14-10-2018 C3497_04870 23e53ae39063fe4022f85cb3c7683f30 414 Gene3D G3DSA:3.40.190.10 30 366 3.6E-67 T 14-10-2018 C3497_04870 23e53ae39063fe4022f85cb3c7683f30 414 SUPERFAMILY SSF53850 26 407 1.09E-33 T 14-10-2018 C3497_04870 23e53ae39063fe4022f85cb3c7683f30 414 Pfam PF13416 Bacterial extracellular solute-binding protein 115 333 1.2E-16 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 SUPERFAMILY SSF48403 36 212 1.42E-44 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 Gene3D G3DSA:1.25.40.20 121 214 5.5E-26 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 Pfam PF12796 Ankyrin repeats (3 copies) 130 210 2.2E-11 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 Pfam PF12796 Ankyrin repeats (3 copies) 37 120 2.9E-10 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 SMART SM00248 158 187 1.7E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 SMART SM00248 125 154 0.0015 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 SMART SM00248 62 91 41.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 SMART SM00248 95 124 0.013 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 PRINTS PR01415 Ankyrin repeat signature 174 188 4.8E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 PRINTS PR01415 Ankyrin repeat signature 126 141 4.8E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 C3497_06115 31877ddd5233abc90a644bf5db9111cf 218 Gene3D G3DSA:1.25.40.20 26 120 7.6E-21 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily C3497_09395 8ceb1cf67c7deb5a5b9850b0413a4fb3 435 SUPERFAMILY SSF53335 61 430 9.75E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_09395 8ceb1cf67c7deb5a5b9850b0413a4fb3 435 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 3 433 68.636 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 C3497_09395 8ceb1cf67c7deb5a5b9850b0413a4fb3 435 Gene3D G3DSA:3.40.1350.30 120 262 7.1E-107 T 14-10-2018 C3497_09395 8ceb1cf67c7deb5a5b9850b0413a4fb3 435 Gene3D G3DSA:3.40.50.150 73 427 7.1E-107 T 14-10-2018 C3497_09395 8ceb1cf67c7deb5a5b9850b0413a4fb3 435 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 260 426 2.0E-14 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 C3497_09395 8ceb1cf67c7deb5a5b9850b0413a4fb3 435 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 362 393 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site C3497_09395 8ceb1cf67c7deb5a5b9850b0413a4fb3 435 Pfam PF01938 TRAM domain 6 46 5.3E-7 T 14-10-2018 IPR002792 TRAM domain C3497_09395 8ceb1cf67c7deb5a5b9850b0413a4fb3 435 Gene3D G3DSA:2.40.50.140 1 72 5.4E-24 T 14-10-2018 C3497_09395 8ceb1cf67c7deb5a5b9850b0413a4fb3 435 SUPERFAMILY SSF50249 5 58 8.0E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_13725 299e96df217142dabc0b9da630bd95bd 400 Gene3D G3DSA:2.40.30.170 53 314 3.7E-34 T 14-10-2018 C3497_13725 299e96df217142dabc0b9da630bd95bd 400 Pfam PF13437 HlyD family secretion protein 204 294 1.2E-7 T 14-10-2018 C3497_13725 299e96df217142dabc0b9da630bd95bd 400 Gene3D G3DSA:2.40.50.100 64 238 3.7E-34 T 14-10-2018 C3497_13725 299e96df217142dabc0b9da630bd95bd 400 Gene3D G3DSA:2.40.420.20 315 356 3.7E-34 T 14-10-2018 C3497_13725 299e96df217142dabc0b9da630bd95bd 400 Gene3D G3DSA:1.10.287.470 98 203 3.7E-34 T 14-10-2018 C3497_13725 299e96df217142dabc0b9da630bd95bd 400 SUPERFAMILY SSF111369 54 262 5.49E-14 T 14-10-2018 C3497_13725 299e96df217142dabc0b9da630bd95bd 400 Pfam PF13533 Biotin-lipoyl like 69 112 2.5E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain C3497_03195 28bb46448a357bb26ba33c9ec3251012 282 SUPERFAMILY SSF82861 25 107 1.03E-15 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 C3497_03195 28bb46448a357bb26ba33c9ec3251012 282 Gene3D G3DSA:2.30.30.60 124 173 2.7E-22 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily C3497_03195 28bb46448a357bb26ba33c9ec3251012 282 SUPERFAMILY SSF50182 109 174 1.11E-17 T 14-10-2018 IPR010920 LSM domain superfamily C3497_03195 28bb46448a357bb26ba33c9ec3251012 282 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 138 172 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 C3497_03195 28bb46448a357bb26ba33c9ec3251012 282 Gene3D G3DSA:3.30.70.100 174 267 6.4E-28 T 14-10-2018 C3497_03195 28bb46448a357bb26ba33c9ec3251012 282 SUPERFAMILY SSF82689 176 274 1.1E-33 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 C3497_03195 28bb46448a357bb26ba33c9ec3251012 282 Pfam PF00924 Mechanosensitive ion channel 69 263 1.3E-49 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 C3497_03195 28bb46448a357bb26ba33c9ec3251012 282 Pfam PF05552 Conserved TM helix 14 59 1.2E-7 T 14-10-2018 IPR008910 Conserved TM helix C3497_10365 e382edfeccb0294536ec11752ad7fc3d 734 SUPERFAMILY SSF55729 176 328 3.25E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_10365 e382edfeccb0294536ec11752ad7fc3d 734 Pfam PF13480 Acetyltransferase (GNAT) domain 536 676 5.5E-25 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 C3497_10365 e382edfeccb0294536ec11752ad7fc3d 734 Pfam PF13480 Acetyltransferase (GNAT) domain 187 318 1.2E-17 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 C3497_10365 e382edfeccb0294536ec11752ad7fc3d 734 SUPERFAMILY SSF55729 525 693 2.61E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 355 382 4.7E-29 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 4.7E-29 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 278 307 4.7E-29 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 9 34 4.7E-29 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 SUPERFAMILY SSF58104 231 498 8.89E-68 T 14-10-2018 C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 180 4.3E-21 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 Pfam PF00672 HAMP domain 211 259 1.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 Gene3D G3DSA:1.10.287.950 210 499 4.0E-78 T 14-10-2018 C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 482 1.2E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 SMART SM00304 211 263 8.8E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_01225 7ae9f0ffeadc5af6673dc441b27bcaf9 547 SMART SM00283 264 497 1.6E-66 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_07580 0c24c1151cfa0c222bebedca1d44ccfd 196 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 32 5.9E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_07580 0c24c1151cfa0c222bebedca1d44ccfd 196 Pfam PF11612 Type II secretion system (T2SS), protein J 103 193 2.9E-14 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 C3497_07580 0c24c1151cfa0c222bebedca1d44ccfd 196 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 2.5E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_07580 0c24c1151cfa0c222bebedca1d44ccfd 196 SUPERFAMILY SSF54523 48 195 2.9E-20 T 14-10-2018 C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 SMART SM00564 143 174 2.0E-5 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 SMART SM00564 459 524 82.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 SMART SM00564 533 565 9.1E-9 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 SMART SM00564 192 231 51.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 SMART SM00564 93 125 7.1E-7 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 278 299 - T 14-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 Pfam PF13360 PQQ-like domain 78 248 1.8E-16 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 Gene3D G3DSA:2.140.10.10 31 623 9.5E-234 T 14-10-2018 C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 Pfam PF01011 PQQ enzyme repeat 539 575 1.3E-11 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 SUPERFAMILY SSF50998 41 616 1.57E-136 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C3497_07785 2a9e36c1e858b7c3ac23e157a7e3f9ba 627 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 30 593 7.8E-223 T 14-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 C3497_00405 ee5c338651e8199036508657cb3202bb 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.6E-250 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 C3497_00405 ee5c338651e8199036508657cb3202bb 609 Pfam PF13522 Glutamine amidotransferase domain 64 191 1.3E-19 T 14-10-2018 C3497_00405 ee5c338651e8199036508657cb3202bb 609 Gene3D G3DSA:3.40.50.10490 447 594 1.2E-143 T 14-10-2018 C3497_00405 ee5c338651e8199036508657cb3202bb 609 SUPERFAMILY SSF53697 244 609 8.63E-113 T 14-10-2018 C3497_00405 ee5c338651e8199036508657cb3202bb 609 SUPERFAMILY SSF56235 2 233 4.98E-69 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_00405 ee5c338651e8199036508657cb3202bb 609 Gene3D G3DSA:3.60.20.10 2 240 8.7E-72 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3497_00405 ee5c338651e8199036508657cb3202bb 609 Gene3D G3DSA:3.40.50.10490 248 608 1.2E-143 T 14-10-2018 C3497_00405 ee5c338651e8199036508657cb3202bb 609 Pfam PF01380 SIS domain 463 591 1.2E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C3497_00405 ee5c338651e8199036508657cb3202bb 609 Pfam PF01380 SIS domain 291 416 2.0E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C3497_00405 ee5c338651e8199036508657cb3202bb 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.609 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 C3497_10085 9cd3afdea7aa3f2f0cef199230c65c88 314 Gene3D G3DSA:3.30.1490.300 83 140 7.7E-10 T 14-10-2018 C3497_10085 9cd3afdea7aa3f2f0cef199230c65c88 314 Gene3D G3DSA:3.30.420.40 58 178 7.7E-10 T 14-10-2018 C3497_10085 9cd3afdea7aa3f2f0cef199230c65c88 314 SUPERFAMILY SSF53067 41 168 2.2E-12 T 14-10-2018 C3497_10085 9cd3afdea7aa3f2f0cef199230c65c88 314 Gene3D G3DSA:3.30.420.40 179 216 7.7E-10 T 14-10-2018 C3497_08775 193386e2884317ce818fa6e7150026ac 340 Pfam PF09002 Domain of unknown function (DUF1887) 13 187 1.3E-17 T 14-10-2018 IPR015093 Protein of unknown function DUF1887 C3497_08775 193386e2884317ce818fa6e7150026ac 340 Gene3D G3DSA:3.40.50.10770 11 147 7.5E-18 T 14-10-2018 C3497_08775 193386e2884317ce818fa6e7150026ac 340 SUPERFAMILY SSF52980 13 213 3.54E-15 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3497_09295 be6bf1a960d1c9fc58e65a830b713625 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.9E-31 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 C3497_09295 be6bf1a960d1c9fc58e65a830b713625 89 PIRSF PIRSF004669 1 89 2.4E-34 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 C3497_09295 be6bf1a960d1c9fc58e65a830b713625 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 2.7E-34 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 C3497_09295 be6bf1a960d1c9fc58e65a830b713625 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.1E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 C3497_09295 be6bf1a960d1c9fc58e65a830b713625 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.1E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 C3497_09295 be6bf1a960d1c9fc58e65a830b713625 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.1E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 C3497_09790 68b3c0bdd3ab3f4e765388bcd9ddd01c 124 SUPERFAMILY SSF109709 36 96 2.75E-7 T 14-10-2018 C3497_05870 cf2599b557ea26c646107b413f0ade15 439 SUPERFAMILY SSF51338 29 89 9.26E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3497_05870 cf2599b557ea26c646107b413f0ade15 439 Gene3D G3DSA:2.30.40.10 9 426 1.4E-175 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3497_05870 cf2599b557ea26c646107b413f0ade15 439 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 29 428 6.9E-175 T 14-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 C3497_05870 cf2599b557ea26c646107b413f0ade15 439 Pfam PF01979 Amidohydrolase family 69 430 1.4E-56 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C3497_05870 cf2599b557ea26c646107b413f0ade15 439 Gene3D G3DSA:3.20.20.140 73 390 1.4E-175 T 14-10-2018 C3497_05870 cf2599b557ea26c646107b413f0ade15 439 SUPERFAMILY SSF51556 72 375 1.4E-96 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3497_11520 2d06beb9ca653394d45ee72aa6cfffe6 177 SUPERFAMILY SSF56784 1 174 1.47E-47 T 14-10-2018 IPR036412 HAD-like superfamily C3497_11520 2d06beb9ca653394d45ee72aa6cfffe6 177 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 145 5.5E-46 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 C3497_11520 2d06beb9ca653394d45ee72aa6cfffe6 177 Gene3D G3DSA:3.40.50.1000 1 177 2.0E-55 T 14-10-2018 IPR023214 HAD superfamily C3497_11520 2d06beb9ca653394d45ee72aa6cfffe6 177 PIRSF PIRSF004682 1 177 6.9E-55 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 C3497_11520 2d06beb9ca653394d45ee72aa6cfffe6 177 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 144 4.2E-35 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 C3497_11520 2d06beb9ca653394d45ee72aa6cfffe6 177 Pfam PF13242 HAD-hyrolase-like 99 169 2.9E-13 T 14-10-2018 C3497_08145 32ac7408ee5db0e66c2430ac8bbc657e 235 Hamap MF_01385 Urease accessory protein UreF [ureF]. 3 235 31.71 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 C3497_08145 32ac7408ee5db0e66c2430ac8bbc657e 235 PIRSF PIRSF009467 1 235 2.0E-60 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 C3497_08145 32ac7408ee5db0e66c2430ac8bbc657e 235 Pfam PF01730 UreF 36 192 1.1E-38 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 C3497_08145 32ac7408ee5db0e66c2430ac8bbc657e 235 Gene3D G3DSA:1.10.4190.10 3 211 5.2E-55 T 14-10-2018 IPR038277 UreF domain superfamily C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 Gene3D G3DSA:1.10.10.10 6 74 5.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 124 135 3.4E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 113 123 3.4E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 152 164 3.4E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 Hamap MF_00015 LexA repressor [lexA]. 7 201 30.451 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 Gene3D G3DSA:2.10.109.10 82 202 1.6E-43 T 14-10-2018 C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 SUPERFAMILY SSF46785 7 73 1.04E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 SUPERFAMILY SSF51306 77 199 2.96E-35 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 Pfam PF01726 LexA DNA binding domain 6 69 3.5E-22 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 TIGRFAM TIGR00498 lexA: repressor LexA 6 200 1.6E-66 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 C3497_07205 82d3336f1244cefbf5f1d4a00553758b 204 Pfam PF00717 Peptidase S24-like 116 182 6.5E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C C3497_09750 c20f798ae9fe0251a43a576a654ab8a0 696 SUPERFAMILY SSF52540 490 671 3.04E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09750 c20f798ae9fe0251a43a576a654ab8a0 696 Gene3D G3DSA:3.40.50.300 226 394 7.8E-25 T 14-10-2018 C3497_09750 c20f798ae9fe0251a43a576a654ab8a0 696 SMART SM00382 489 620 3.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_09750 c20f798ae9fe0251a43a576a654ab8a0 696 SMART SM00382 248 381 8.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_09750 c20f798ae9fe0251a43a576a654ab8a0 696 Gene3D G3DSA:3.40.50.300 472 632 3.1E-36 T 14-10-2018 C3497_09750 c20f798ae9fe0251a43a576a654ab8a0 696 SUPERFAMILY SSF52540 222 433 8.13E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09750 c20f798ae9fe0251a43a576a654ab8a0 696 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 253 378 1.8E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_09750 c20f798ae9fe0251a43a576a654ab8a0 696 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 493 615 5.5E-28 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_08800 b458a4848ff86798807b28e7d4e0000b 267 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 104 265 1.9E-45 T 14-10-2018 IPR000160 GGDEF domain C3497_08800 b458a4848ff86798807b28e7d4e0000b 267 Pfam PF00990 Diguanylate cyclase, GGDEF domain 108 262 2.7E-41 T 14-10-2018 IPR000160 GGDEF domain C3497_08800 b458a4848ff86798807b28e7d4e0000b 267 SMART SM00267 96 267 4.1E-55 T 14-10-2018 IPR000160 GGDEF domain C3497_08800 b458a4848ff86798807b28e7d4e0000b 267 Gene3D G3DSA:3.30.70.270 92 266 8.7E-55 T 14-10-2018 C3497_08800 b458a4848ff86798807b28e7d4e0000b 267 SUPERFAMILY SSF55073 112 266 2.04E-46 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_14710 ee0f1b1cb4cee7b06eb8de9d9432b194 170 Pfam PF00578 AhpC/TSA family 44 134 8.7E-13 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3497_14710 ee0f1b1cb4cee7b06eb8de9d9432b194 170 ProSitePatterns PS00194 Thioredoxin family active site. 53 71 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3497_14710 ee0f1b1cb4cee7b06eb8de9d9432b194 170 Gene3D G3DSA:3.40.30.10 21 163 9.2E-26 T 14-10-2018 C3497_14710 ee0f1b1cb4cee7b06eb8de9d9432b194 170 SUPERFAMILY SSF52833 45 151 4.64E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_01100 349b7c4deb6b51c2f7c648877165ff60 535 SUPERFAMILY SSF52096 23 267 3.62E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_01100 349b7c4deb6b51c2f7c648877165ff60 535 Gene3D G3DSA:3.90.226.10 1 271 8.7E-98 T 14-10-2018 C3497_01100 349b7c4deb6b51c2f7c648877165ff60 535 Pfam PF01039 Carboxyl transferase domain 48 525 2.1E-146 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 C3497_01100 349b7c4deb6b51c2f7c648877165ff60 535 Gene3D G3DSA:3.90.226.10 276 535 1.8E-99 T 14-10-2018 C3497_01100 349b7c4deb6b51c2f7c648877165ff60 535 SUPERFAMILY SSF52096 237 517 9.54E-84 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_08910 b45be652deb917943d1c7d5caaa499aa 92 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 14 83 2.5E-11 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 C3497_08060 da6554446cf2c4380665cb973e7b7c21 159 SUPERFAMILY SSF55040 12 156 4.84E-62 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_08060 da6554446cf2c4380665cb973e7b7c21 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 3 159 36.161 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_08060 da6554446cf2c4380665cb973e7b7c21 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 5 153 9.8E-63 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_08060 da6554446cf2c4380665cb973e7b7c21 159 Gene3D G3DSA:3.30.70.640 2 158 2.0E-69 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_08060 da6554446cf2c4380665cb973e7b7c21 159 Pfam PF01967 MoaC family 16 151 7.0E-56 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_14765 594848c667d2340d9b06ac472db20629 323 Pfam PF05099 Tellurite resistance protein TerB 5 112 2.4E-9 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal C3497_14765 594848c667d2340d9b06ac472db20629 323 SUPERFAMILY SSF158682 2 120 2.35E-17 T 14-10-2018 IPR029024 TerB-like C3497_14765 594848c667d2340d9b06ac472db20629 323 Gene3D G3DSA:1.10.3680.10 1 125 1.9E-13 T 14-10-2018 IPR029024 TerB-like C3497_04000 faa084415abd8a321eb987088991cf6b 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.4E-13 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 C3497_04000 faa084415abd8a321eb987088991cf6b 420 Gene3D G3DSA:1.10.720.10 1 47 1.7E-17 T 14-10-2018 C3497_04000 faa084415abd8a321eb987088991cf6b 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.9E-30 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 C3497_04000 faa084415abd8a321eb987088991cf6b 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.3E-211 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 C3497_04000 faa084415abd8a321eb987088991cf6b 420 SUPERFAMILY SSF68912 1 46 3.22E-10 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily C3497_04000 faa084415abd8a321eb987088991cf6b 420 SUPERFAMILY SSF50249 49 125 1.09E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_04000 faa084415abd8a321eb987088991cf6b 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.1E-23 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3497_04000 faa084415abd8a321eb987088991cf6b 420 Gene3D G3DSA:3.40.50.300 130 417 8.3E-131 T 14-10-2018 C3497_04000 faa084415abd8a321eb987088991cf6b 420 Gene3D G3DSA:2.40.50.140 48 123 9.9E-33 T 14-10-2018 C3497_04000 faa084415abd8a321eb987088991cf6b 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 246.587 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 C3497_04000 faa084415abd8a321eb987088991cf6b 420 SUPERFAMILY SSF52540 90 371 7.9E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04000 faa084415abd8a321eb987088991cf6b 420 SMART SM00357 52 118 7.2E-15 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C3497_04000 faa084415abd8a321eb987088991cf6b 420 SMART SM00382 170 356 8.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_04000 faa084415abd8a321eb987088991cf6b 420 SMART SM00959 5 47 1.1E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 C3497_13845 3f9a491e795f8b963822e83031372866 248 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 3 244 3.2E-45 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 C3497_13845 3f9a491e795f8b963822e83031372866 248 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 4 241 1.1E-69 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 C3497_08995 620b915b19a2555fa4ae636ece04e698 559 SUPERFAMILY SSF51004 128 559 6.15E-119 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily C3497_08995 620b915b19a2555fa4ae636ece04e698 559 Gene3D G3DSA:1.10.760.10 18 127 5.7E-35 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08995 620b915b19a2555fa4ae636ece04e698 559 Pfam PF02239 Cytochrome D1 heme domain 156 554 2.8E-157 T 14-10-2018 C3497_08995 620b915b19a2555fa4ae636ece04e698 559 Gene3D G3DSA:2.140.10.20 128 559 1.3E-191 T 14-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily C3497_08995 620b915b19a2555fa4ae636ece04e698 559 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 36 119 3.4E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_08995 620b915b19a2555fa4ae636ece04e698 559 SUPERFAMILY SSF46626 9 139 4.3E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 SMART SM01228 547 618 1.9E-43 T 14-10-2018 C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 Gene3D G3DSA:1.10.150.570 570 623 6.2E-24 T 14-10-2018 C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 Gene3D G3DSA:1.10.10.1800 459 551 4.4E-23 T 14-10-2018 C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 Pfam PF13932 GidA associated domain 402 617 7.4E-75 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 Pfam PF01134 Glucose inhibited division protein A 8 398 5.3E-169 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 Gene3D G3DSA:3.50.50.60 2 230 6.4E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 Gene3D G3DSA:3.50.50.60 295 458 4.5E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 623 9.0E-273 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 SUPERFAMILY SSF51905 7 261 7.38E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_13325 9a964a5476cecfe6f815e747b26af44d 637 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 625 42.648 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 C3497_13825 54b19d5eb3fd35365da37a053e21ba6e 375 SUPERFAMILY SSF55124 2 70 3.93E-14 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_13825 54b19d5eb3fd35365da37a053e21ba6e 375 SUPERFAMILY SSF56014 280 347 1.22E-9 T 14-10-2018 C3497_13825 54b19d5eb3fd35365da37a053e21ba6e 375 Gene3D G3DSA:3.90.480.10 9 73 2.0E-14 T 14-10-2018 C3497_13825 54b19d5eb3fd35365da37a053e21ba6e 375 Gene3D G3DSA:3.30.413.10 278 354 5.6E-9 T 14-10-2018 C3497_13825 54b19d5eb3fd35365da37a053e21ba6e 375 Gene3D G3DSA:3.30.413.10 74 185 2.0E-14 T 14-10-2018 C3497_13825 54b19d5eb3fd35365da37a053e21ba6e 375 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 4 64 3.8E-12 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3497_13825 54b19d5eb3fd35365da37a053e21ba6e 375 SUPERFAMILY SSF56014 92 178 3.53E-6 T 14-10-2018 C3497_04070 65bd8c0740d36c5fa7e72fa1a696a1f8 1009 Gene3D G3DSA:1.20.58.2200 947 1008 1.3E-21 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily C3497_04070 65bd8c0740d36c5fa7e72fa1a696a1f8 1009 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 170 241 2.0E-24 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal C3497_04070 65bd8c0740d36c5fa7e72fa1a696a1f8 1009 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 965 1008 7.0E-20 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal C3497_04070 65bd8c0740d36c5fa7e72fa1a696a1f8 1009 Gene3D G3DSA:3.10.350.10 152 232 1.2E-5 T 14-10-2018 IPR036779 LysM domain superfamily C3497_12650 09a7742e9002ae0a5577eaf9bfe0dbf7 450 Gene3D G3DSA:1.20.1250.20 246 444 4.4E-10 T 14-10-2018 C3497_12650 09a7742e9002ae0a5577eaf9bfe0dbf7 450 Gene3D G3DSA:1.20.1250.20 10 209 4.9E-13 T 14-10-2018 C3497_12650 09a7742e9002ae0a5577eaf9bfe0dbf7 450 SUPERFAMILY SSF103473 11 436 1.27E-36 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_12650 09a7742e9002ae0a5577eaf9bfe0dbf7 450 Pfam PF07690 Major Facilitator Superfamily 23 395 1.9E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_07805 e8e5638cb79797cc3cdfc7c8164ce680 255 Gene3D G3DSA:2.60.40.10 159 254 2.4E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold C3497_07805 e8e5638cb79797cc3cdfc7c8164ce680 255 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 32 249 1.1E-61 T 14-10-2018 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier C3497_07805 e8e5638cb79797cc3cdfc7c8164ce680 255 Gene3D G3DSA:2.60.40.2470 17 142 3.1E-24 T 14-10-2018 IPR038162 Ig-like SoxY domain superfamily C3497_07805 e8e5638cb79797cc3cdfc7c8164ce680 255 SUPERFAMILY SSF81296 170 253 1.16E-11 T 14-10-2018 IPR014756 Immunoglobulin E-set C3497_07805 e8e5638cb79797cc3cdfc7c8164ce680 255 Pfam PF08770 Sulphur oxidation protein SoxZ 173 252 1.7E-6 T 14-10-2018 IPR014880 Sulphur oxidation protein SoxZ C3497_07805 e8e5638cb79797cc3cdfc7c8164ce680 255 Pfam PF13501 Sulfur oxidation protein SoxY 38 142 2.4E-25 T 14-10-2018 IPR032711 Ig-like SoxY domain C3497_02035 3b32ff09e0a6cbef9f365cf1a0c943f2 427 SUPERFAMILY SSF116734 235 418 1.01E-30 T 14-10-2018 C3497_02035 3b32ff09e0a6cbef9f365cf1a0c943f2 427 Gene3D G3DSA:3.90.220.20 232 365 2.7E-24 T 14-10-2018 C3497_02035 3b32ff09e0a6cbef9f365cf1a0c943f2 427 Gene3D G3DSA:3.90.220.20 3 199 7.2E-32 T 14-10-2018 C3497_02035 3b32ff09e0a6cbef9f365cf1a0c943f2 427 SUPERFAMILY SSF116734 9 204 2.62E-33 T 14-10-2018 C3497_02035 3b32ff09e0a6cbef9f365cf1a0c943f2 427 Pfam PF01420 Type I restriction modification DNA specificity domain 26 187 2.1E-11 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 C3497_02035 3b32ff09e0a6cbef9f365cf1a0c943f2 427 Pfam PF01420 Type I restriction modification DNA specificity domain 242 368 1.9E-10 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 C3497_07915 0aa39c61a96ec6c1adddfa28749f2ac0 151 SUPERFAMILY SSF54690 3 148 1.31E-52 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 C3497_07915 0aa39c61a96ec6c1adddfa28749f2ac0 151 Gene3D G3DSA:3.90.1170.40 1 148 1.3E-52 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 C3497_07915 0aa39c61a96ec6c1adddfa28749f2ac0 151 Pfam PF02391 MoaE protein 5 119 1.6E-36 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 C3497_13855 1253f9e3a9a9ee499932c373d771b947 124 Gene3D G3DSA:3.30.420.180 1 122 1.2E-22 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 C3497_13855 1253f9e3a9a9ee499932c373d771b947 124 SUPERFAMILY SSF159664 1 120 2.22E-21 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 C3497_13855 1253f9e3a9a9ee499932c373d771b947 124 Pfam PF01890 Cobalamin synthesis G C-terminus 2 119 1.7E-16 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 C3497_12030 c88836effef9a570b27354368d26e8ed 299 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 44 290 2.3E-87 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 C3497_12030 c88836effef9a570b27354368d26e8ed 299 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3497_12030 c88836effef9a570b27354368d26e8ed 299 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 28 295 42.813 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 C3497_12030 c88836effef9a570b27354368d26e8ed 299 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 35 294 5.1E-73 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 C3497_12030 c88836effef9a570b27354368d26e8ed 299 Gene3D G3DSA:3.40.50.150 105 295 9.4E-58 T 14-10-2018 C3497_12030 c88836effef9a570b27354368d26e8ed 299 SUPERFAMILY SSF53335 37 291 3.26E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_12030 c88836effef9a570b27354368d26e8ed 299 Gene3D G3DSA:1.10.8.10 28 104 1.1E-18 T 14-10-2018 C3497_12030 c88836effef9a570b27354368d26e8ed 299 Pfam PF05175 Methyltransferase small domain 124 210 1.3E-14 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 C3497_13165 42846cb7050ecc8e9ee059137c54938e 305 Gene3D G3DSA:3.60.40.10 1 247 5.3E-50 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_13165 42846cb7050ecc8e9ee059137c54938e 305 SMART SM00331 8 243 2.8E-14 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_13165 42846cb7050ecc8e9ee059137c54938e 305 Pfam PF13672 Protein phosphatase 2C 8 197 3.3E-15 T 14-10-2018 C3497_13165 42846cb7050ecc8e9ee059137c54938e 305 SUPERFAMILY SSF81606 2 244 9.81E-53 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_13165 42846cb7050ecc8e9ee059137c54938e 305 SMART SM00332 1 241 3.2E-6 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_02495 33d47c2cfca873fd1a577f0263fae01c 371 Gene3D G3DSA:3.40.50.300 40 238 2.0E-5 T 14-10-2018 C3497_02495 33d47c2cfca873fd1a577f0263fae01c 371 SUPERFAMILY SSF52540 20 236 1.26E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02495 33d47c2cfca873fd1a577f0263fae01c 371 Pfam PF13166 AAA domain 133 345 8.2E-11 T 14-10-2018 IPR026866 Protein CR006, P-loop domain C3497_07415 af73031e9d7d1826613fcc7a862eb7ab 225 SUPERFAMILY SSF52540 1 214 5.77E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07415 af73031e9d7d1826613fcc7a862eb7ab 225 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_07415 af73031e9d7d1826613fcc7a862eb7ab 225 Gene3D G3DSA:3.40.50.300 1 221 5.5E-61 T 14-10-2018 C3497_07415 af73031e9d7d1826613fcc7a862eb7ab 225 SMART SM00382 29 218 4.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_07415 af73031e9d7d1826613fcc7a862eb7ab 225 Pfam PF00005 ABC transporter 21 168 3.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 Gene3D G3DSA:3.40.190.80 159 268 8.4E-22 T 14-10-2018 C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 Gene3D G3DSA:3.30.540.10 9 158 8.1E-38 T 14-10-2018 C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 89 102 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 3.7E-22 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 138 161 3.7E-22 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 3.7E-22 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 3.7E-22 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 3.7E-22 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 SUPERFAMILY SSF56655 21 266 2.88E-63 T 14-10-2018 C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 Pfam PF00459 Inositol monophosphatase family 31 254 2.5E-46 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3497_03480 9f5a7b6ad3b2f67d8e324b53c523f693 269 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 C3497_05310 d9d1975efba89a40c930fd2d2005fb0f 485 TIGRFAM TIGR00835 agcS: amino acid carrier protein 10 439 3.5E-140 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_05310 d9d1975efba89a40c930fd2d2005fb0f 485 PRINTS PR00175 Sodium/alanine symporter signature 408 428 6.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_05310 d9d1975efba89a40c930fd2d2005fb0f 485 PRINTS PR00175 Sodium/alanine symporter signature 208 227 6.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_05310 d9d1975efba89a40c930fd2d2005fb0f 485 PRINTS PR00175 Sodium/alanine symporter signature 87 109 6.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_05310 d9d1975efba89a40c930fd2d2005fb0f 485 PRINTS PR00175 Sodium/alanine symporter signature 180 198 6.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_05310 d9d1975efba89a40c930fd2d2005fb0f 485 PRINTS PR00175 Sodium/alanine symporter signature 299 317 6.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_05310 d9d1975efba89a40c930fd2d2005fb0f 485 PRINTS PR00175 Sodium/alanine symporter signature 347 369 6.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_05310 d9d1975efba89a40c930fd2d2005fb0f 485 Pfam PF01235 Sodium:alanine symporter family 53 452 2.3E-143 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3497_11545 d00a5d342c48b5bd80b54c6978503f43 250 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 134 243 1.6E-32 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 C3497_11545 d00a5d342c48b5bd80b54c6978503f43 250 Pfam PF02130 Uncharacterized protein family UPF0054 118 242 1.6E-31 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 C3497_11545 d00a5d342c48b5bd80b54c6978503f43 250 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 98 247 21.537 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 C3497_11545 d00a5d342c48b5bd80b54c6978503f43 250 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 213 223 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site C3497_11545 d00a5d342c48b5bd80b54c6978503f43 250 SUPERFAMILY SSF55486 115 249 5.86E-41 T 14-10-2018 C3497_11545 d00a5d342c48b5bd80b54c6978503f43 250 Gene3D G3DSA:3.40.390.30 98 250 1.7E-44 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 Gene3D G3DSA:3.30.420.40 196 351 1.7E-124 T 14-10-2018 C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 Gene3D G3DSA:3.30.420.40 12 371 1.7E-124 T 14-10-2018 C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 409 30.975 T 14-10-2018 IPR020823 Cell division protein FtsA C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 Pfam PF14450 Cell division protein FtsA 206 373 5.4E-26 T 14-10-2018 C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 Gene3D G3DSA:3.90.640.10 234 299 1.7E-124 T 14-10-2018 C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 SUPERFAMILY SSF53067 198 376 2.29E-51 T 14-10-2018 C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 PIRSF PIRSF003101 1 409 1.4E-152 T 14-10-2018 IPR020823 Cell division protein FtsA C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 Pfam PF14450 Cell division protein FtsA 10 192 9.0E-9 T 14-10-2018 C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 SMART SM00842 9 195 6.1E-99 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 SUPERFAMILY SSF53067 7 196 1.12E-59 T 14-10-2018 C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 375 1.2E-145 T 14-10-2018 IPR020823 Cell division protein FtsA C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 2.1E-31 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 C3497_12110 211aef541c3fa0d4d12a57f428f1bae2 409 Gene3D G3DSA:3.30.1490.110 86 168 1.7E-124 T 14-10-2018 C3497_02880 cb2dd3d47c22b9f2d83d3aee654bdf0f 263 SMART SM00382 33 216 3.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_02880 cb2dd3d47c22b9f2d83d3aee654bdf0f 263 SUPERFAMILY SSF52540 5 226 2.47E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02880 cb2dd3d47c22b9f2d83d3aee654bdf0f 263 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_02880 cb2dd3d47c22b9f2d83d3aee654bdf0f 263 Gene3D G3DSA:3.40.50.300 1 251 3.2E-63 T 14-10-2018 C3497_02880 cb2dd3d47c22b9f2d83d3aee654bdf0f 263 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 1.3E-104 T 14-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 C3497_02880 cb2dd3d47c22b9f2d83d3aee654bdf0f 263 Pfam PF00005 ABC transporter 24 166 7.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_10000 23455072c9c935df8e760536fc019bac 475 Gene3D G3DSA:2.60.40.10 358 473 6.5E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold C3497_10000 23455072c9c935df8e760536fc019bac 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 269 280 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_10000 23455072c9c935df8e760536fc019bac 475 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 38 472 1.4E-159 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 C3497_10000 23455072c9c935df8e760536fc019bac 475 Pfam PF13746 4Fe-4S dicluster domain 216 321 8.5E-45 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_10000 23455072c9c935df8e760536fc019bac 475 Pfam PF12801 4Fe-4S binding domain 92 133 4.5E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_10000 23455072c9c935df8e760536fc019bac 475 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 357 474 1.9E-29 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain C3497_10000 23455072c9c935df8e760536fc019bac 475 SUPERFAMILY SSF54862 102 363 1.12E-31 T 14-10-2018 C3497_11275 02d70215c6e9dd3dde769b80deb3119c 208 Gene3D G3DSA:3.40.190.10 13 185 1.7E-14 T 14-10-2018 C3497_11275 02d70215c6e9dd3dde769b80deb3119c 208 Gene3D G3DSA:3.40.190.10 80 183 1.7E-14 T 14-10-2018 C3497_11275 02d70215c6e9dd3dde769b80deb3119c 208 Pfam PF03466 LysR substrate binding domain 8 195 1.6E-16 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_11275 02d70215c6e9dd3dde769b80deb3119c 208 SUPERFAMILY SSF53850 7 199 2.71E-17 T 14-10-2018 C3497_07790 9b8dd99064b51467f97f60249ee3956d 199 Gene3D G3DSA:2.160.20.80 44 195 1.2E-37 T 14-10-2018 C3497_07790 9b8dd99064b51467f97f60249ee3956d 199 Pfam PF00805 Pentapeptide repeats (8 copies) 51 84 1.3E-8 T 14-10-2018 IPR001646 Pentapeptide repeat C3497_07790 9b8dd99064b51467f97f60249ee3956d 199 SUPERFAMILY SSF141571 51 192 2.45E-32 T 14-10-2018 C3497_07790 9b8dd99064b51467f97f60249ee3956d 199 Pfam PF13599 Pentapeptide repeats (9 copies) 119 192 5.7E-9 T 14-10-2018 IPR001646 Pentapeptide repeat C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Gene3D G3DSA:2.40.50.140 14 105 9.0E-17 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Gene3D G3DSA:2.40.50.140 195 275 6.6E-29 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 PIRSF PIRSF002111 2 542 3.6E-217 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SUPERFAMILY SSF50249 11 120 2.89E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Pfam PF00575 S1 RNA binding domain 369 442 3.6E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Pfam PF00575 S1 RNA binding domain 198 268 2.4E-23 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Pfam PF00575 S1 RNA binding domain 111 179 1.2E-10 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Pfam PF00575 S1 RNA binding domain 27 94 2.6E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Pfam PF00575 S1 RNA binding domain 456 528 1.5E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Pfam PF00575 S1 RNA binding domain 284 355 1.3E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SUPERFAMILY SSF50249 350 448 8.24E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SMART SM00316 370 442 1.9E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SMART SM00316 283 355 3.5E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SMART SM00316 457 528 1.0E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SMART SM00316 27 95 2.8E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SMART SM00316 198 268 1.1E-30 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SMART SM00316 111 179 4.8E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 PRINTS PR00681 Ribosomal protein S1 signature 163 183 2.9E-81 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 PRINTS PR00681 Ribosomal protein S1 signature 92 111 2.9E-81 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 PRINTS PR00681 Ribosomal protein S1 signature 134 151 2.9E-81 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 PRINTS PR00681 Ribosomal protein S1 signature 298 317 2.9E-81 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 PRINTS PR00681 Ribosomal protein S1 signature 29 47 2.9E-81 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 PRINTS PR00681 Ribosomal protein S1 signature 116 132 2.9E-81 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 PRINTS PR00681 Ribosomal protein S1 signature 47 61 2.9E-81 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 PRINTS PR00681 Ribosomal protein S1 signature 220 241 2.9E-81 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 PRINTS PR00681 Ribosomal protein S1 signature 338 356 2.9E-81 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SUPERFAMILY SSF50249 437 547 5.67E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SUPERFAMILY SSF50249 263 363 5.08E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 11 528 1.2E-208 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Gene3D G3DSA:2.40.50.140 453 535 2.8E-20 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SUPERFAMILY SSF50249 197 285 2.16E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Gene3D G3DSA:2.40.50.140 366 452 9.4E-25 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Gene3D G3DSA:2.40.50.140 106 192 6.1E-8 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 Gene3D G3DSA:2.40.50.140 276 365 1.6E-28 T 14-10-2018 C3497_09555 2138c4e6822664cea68d2e78435d4a29 568 SUPERFAMILY SSF50249 111 193 2.89E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_07835 acdfe66eb624f94a6058574122738ab6 93 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 13 92 1.4E-33 T 14-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 C3497_07835 acdfe66eb624f94a6058574122738ab6 93 Gene3D G3DSA:1.10.10.1150 9 93 1.2E-24 T 14-10-2018 C3497_07835 acdfe66eb624f94a6058574122738ab6 93 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 30 91 4.4E-14 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D C3497_12855 90bf0fcbc19ef3bf8b4938d6b618bfab 235 SUPERFAMILY SSF143422 2 127 1.12E-32 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C3497_12855 90bf0fcbc19ef3bf8b4938d6b618bfab 235 Gene3D G3DSA:3.30.70.1290 1 155 2.2E-39 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C3497_12855 90bf0fcbc19ef3bf8b4938d6b618bfab 235 Pfam PF01797 Transposase IS200 like 12 122 1.8E-16 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C3497_12855 90bf0fcbc19ef3bf8b4938d6b618bfab 235 SMART SM01321 9 124 3.7E-43 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C3497_13785 779029a15283110720487d7ced1fcb95 211 SUPERFAMILY SSF48498 96 208 4.77E-30 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C3497_13785 779029a15283110720487d7ced1fcb95 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 2.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_13785 779029a15283110720487d7ced1fcb95 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 2.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_13785 779029a15283110720487d7ced1fcb95 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 70 2.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_13785 779029a15283110720487d7ced1fcb95 211 SUPERFAMILY SSF46689 16 94 3.9E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_13785 779029a15283110720487d7ced1fcb95 211 Pfam PF16925 Bacterial transcriptional repressor C-terminal 96 209 2.4E-51 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal C3497_13785 779029a15283110720487d7ced1fcb95 211 Gene3D G3DSA:1.10.357.10 23 208 7.0E-72 T 14-10-2018 C3497_04510 35b46ba9f7a3f6c39f6d13bf3b16fafa 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 292 2.3E-80 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3497_04510 35b46ba9f7a3f6c39f6d13bf3b16fafa 313 SUPERFAMILY SSF161111 19 216 1.83E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3497_04510 35b46ba9f7a3f6c39f6d13bf3b16fafa 313 SUPERFAMILY SSF160240 223 292 4.05E-7 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 C3497_04510 35b46ba9f7a3f6c39f6d13bf3b16fafa 313 Pfam PF01545 Cation efflux family 27 215 2.3E-41 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3497_04510 35b46ba9f7a3f6c39f6d13bf3b16fafa 313 Gene3D G3DSA:1.20.1510.10 22 215 3.4E-39 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3497_07755 50c863a9f4cc6cd22f2e8ee4b05683fe 506 Pfam PF00171 Aldehyde dehydrogenase family 34 493 2.5E-162 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3497_07755 50c863a9f4cc6cd22f2e8ee4b05683fe 506 Gene3D G3DSA:3.40.309.10 265 463 2.9E-163 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3497_07755 50c863a9f4cc6cd22f2e8ee4b05683fe 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 C3497_07755 50c863a9f4cc6cd22f2e8ee4b05683fe 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 C3497_07755 50c863a9f4cc6cd22f2e8ee4b05683fe 506 SUPERFAMILY SSF53720 13 498 2.75E-160 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3497_07755 50c863a9f4cc6cd22f2e8ee4b05683fe 506 Gene3D G3DSA:3.40.605.10 35 491 2.9E-163 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3497_07695 c632b77891944d15f990213db5ba2045 145 Gene3D G3DSA:2.60.120.620 1 143 5.3E-26 T 14-10-2018 C3497_01585 e7d151a2ffb2c96ee0215bf2257a4058 271 SMART SM00346 25 115 9.0E-29 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 C3497_01585 e7d151a2ffb2c96ee0215bf2257a4058 271 Pfam PF01614 Bacterial transcriptional regulator 144 266 6.9E-12 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal C3497_01585 e7d151a2ffb2c96ee0215bf2257a4058 271 SUPERFAMILY SSF55781 92 269 2.68E-37 T 14-10-2018 C3497_01585 e7d151a2ffb2c96ee0215bf2257a4058 271 SUPERFAMILY SSF46785 25 98 3.45E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_01585 e7d151a2ffb2c96ee0215bf2257a4058 271 Pfam PF09339 IclR helix-turn-helix domain 27 77 2.0E-18 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 C3497_01585 e7d151a2ffb2c96ee0215bf2257a4058 271 Gene3D G3DSA:1.10.10.10 14 93 9.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_01585 e7d151a2ffb2c96ee0215bf2257a4058 271 Gene3D G3DSA:3.30.450.40 98 266 2.3E-34 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_14620 b2f7813237c19084f32ce6c474fd800b 165 SUPERFAMILY SSF52833 26 163 7.42E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_14620 b2f7813237c19084f32ce6c474fd800b 165 Pfam PF00578 AhpC/TSA family 27 142 3.2E-24 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3497_14620 b2f7813237c19084f32ce6c474fd800b 165 Gene3D G3DSA:3.40.30.10 22 165 7.2E-42 T 14-10-2018 C3497_13075 c961b278d5db06f8cb6d7d1180d92044 209 SUPERFAMILY SSF52540 3 204 2.25E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13075 c961b278d5db06f8cb6d7d1180d92044 209 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 197 7.6E-65 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 C3497_13075 c961b278d5db06f8cb6d7d1180d92044 209 SMART SM00382 26 208 6.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_13075 c961b278d5db06f8cb6d7d1180d92044 209 Pfam PF00005 ABC transporter 19 160 1.7E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_13075 c961b278d5db06f8cb6d7d1180d92044 209 Gene3D G3DSA:3.40.50.300 1 206 6.6E-40 T 14-10-2018 C3497_13075 c961b278d5db06f8cb6d7d1180d92044 209 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_02325 2478f2ff8d801fa0c58906b48085f142 154 Pfam PF13511 Domain of unknown function (DUF4124) 6 59 2.4E-11 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 C3497_10220 6d04b461a11b10d95cfad26495cbd487 122 SUPERFAMILY SSF81273 77 119 7.45E-12 T 14-10-2018 C3497_10220 6d04b461a11b10d95cfad26495cbd487 122 Pfam PF00816 H-NS histone family 10 112 5.9E-24 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 C3497_10220 6d04b461a11b10d95cfad26495cbd487 122 SMART SM00528 74 119 1.4E-13 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 C3497_10220 6d04b461a11b10d95cfad26495cbd487 122 Gene3D G3DSA:4.10.430.10 69 121 1.5E-14 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 C3497_00335 04f31f59ab03888e17669d60af2dda1e 789 SUPERFAMILY SSF53955 42 253 1.77E-77 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_00335 04f31f59ab03888e17669d60af2dda1e 789 Pfam PF00905 Penicillin binding protein transpeptidase domain 425 691 1.5E-39 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C3497_00335 04f31f59ab03888e17669d60af2dda1e 789 SUPERFAMILY SSF56601 211 723 8.05E-127 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3497_00335 04f31f59ab03888e17669d60af2dda1e 789 Gene3D G3DSA:1.10.3810.10 49 243 2.1E-78 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_00335 04f31f59ab03888e17669d60af2dda1e 789 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 706 3.0E-193 T 14-10-2018 C3497_00335 04f31f59ab03888e17669d60af2dda1e 789 Gene3D G3DSA:2.40.50.140 348 418 4.5E-18 T 14-10-2018 C3497_00335 04f31f59ab03888e17669d60af2dda1e 789 Pfam PF00912 Transglycosylase 56 229 9.4E-66 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_00335 04f31f59ab03888e17669d60af2dda1e 789 Pfam PF17092 Penicillin-binding protein OB-like domain 317 420 4.1E-19 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3497_11205 82fcf076f443f49593e6bc68997f1a65 314 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 28 312 1.0E-134 T 14-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 C3497_11205 82fcf076f443f49593e6bc68997f1a65 314 Pfam PF06834 TraU protein 33 302 6.0E-75 T 14-10-2018 IPR009649 TraU C3497_03330 aee5bba547c597d731274e3e63cd3d64 149 SUPERFAMILY SSF51283 2 148 1.44E-50 T 14-10-2018 IPR036157 dUTPase-like superfamily C3497_03330 aee5bba547c597d731274e3e63cd3d64 149 TIGRFAM TIGR00576 dut: dUTP diphosphatase 15 148 2.2E-45 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 C3497_03330 aee5bba547c597d731274e3e63cd3d64 149 Pfam PF00692 dUTPase 16 147 4.1E-37 T 14-10-2018 IPR029054 dUTPase-like C3497_03330 aee5bba547c597d731274e3e63cd3d64 149 Gene3D G3DSA:2.70.40.10 1 149 3.4E-49 T 14-10-2018 IPR036157 dUTPase-like superfamily C3497_03330 aee5bba547c597d731274e3e63cd3d64 149 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 148 33.07 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 C3497_00475 09c59934f507b269eab217c0fb5053cc 844 Gene3D G3DSA:3.20.20.450 585 839 6.6E-91 T 14-10-2018 IPR035919 EAL domain superfamily C3497_00475 09c59934f507b269eab217c0fb5053cc 844 Gene3D G3DSA:3.30.70.270 402 584 8.8E-45 T 14-10-2018 C3497_00475 09c59934f507b269eab217c0fb5053cc 844 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 406 565 2.6E-33 T 14-10-2018 IPR000160 GGDEF domain C3497_00475 09c59934f507b269eab217c0fb5053cc 844 Gene3D G3DSA:1.10.287.130 215 280 2.4E-7 T 14-10-2018 C3497_00475 09c59934f507b269eab217c0fb5053cc 844 SMART SM00086 355 397 6.2E-5 T 14-10-2018 IPR001610 PAC motif C3497_00475 09c59934f507b269eab217c0fb5053cc 844 Pfam PF00990 Diguanylate cyclase, GGDEF domain 408 562 1.5E-39 T 14-10-2018 IPR000160 GGDEF domain C3497_00475 09c59934f507b269eab217c0fb5053cc 844 SUPERFAMILY SSF55073 413 565 7.38E-37 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_00475 09c59934f507b269eab217c0fb5053cc 844 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 404 9.2E-13 T 14-10-2018 IPR000014 PAS domain C3497_00475 09c59934f507b269eab217c0fb5053cc 844 Pfam PF00672 HAMP domain 216 262 4.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_00475 09c59934f507b269eab217c0fb5053cc 844 SMART SM00052 581 829 1.8E-92 T 14-10-2018 IPR001633 EAL domain C3497_00475 09c59934f507b269eab217c0fb5053cc 844 Pfam PF00563 EAL domain 587 824 1.5E-70 T 14-10-2018 IPR001633 EAL domain C3497_00475 09c59934f507b269eab217c0fb5053cc 844 SUPERFAMILY SSF141868 586 835 3.92E-78 T 14-10-2018 IPR035919 EAL domain superfamily C3497_00475 09c59934f507b269eab217c0fb5053cc 844 Gene3D G3DSA:3.30.450.20 281 349 1.2E-15 T 14-10-2018 C3497_00475 09c59934f507b269eab217c0fb5053cc 844 SMART SM00304 214 266 1.6E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_00475 09c59934f507b269eab217c0fb5053cc 844 SMART SM00267 397 569 1.8E-48 T 14-10-2018 IPR000160 GGDEF domain C3497_00475 09c59934f507b269eab217c0fb5053cc 844 SUPERFAMILY SSF55785 266 394 2.44E-20 T 14-10-2018 IPR035965 PAS domain superfamily C3497_00475 09c59934f507b269eab217c0fb5053cc 844 SUPERFAMILY SSF158472 215 263 4.84E-8 T 14-10-2018 C3497_00475 09c59934f507b269eab217c0fb5053cc 844 SMART SM00091 280 348 4.8E-6 T 14-10-2018 IPR000014 PAS domain C3497_00475 09c59934f507b269eab217c0fb5053cc 844 Gene3D G3DSA:2.10.70.100 353 398 4.0E-13 T 14-10-2018 C3497_00475 09c59934f507b269eab217c0fb5053cc 844 Pfam PF08447 PAS fold 303 390 3.0E-17 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3497_02835 db5dd648d621694d9f60b31928f72663 384 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 10 314 2.7E-86 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 C3497_02835 db5dd648d621694d9f60b31928f72663 384 Gene3D G3DSA:3.30.930.10 3 321 5.0E-68 T 14-10-2018 C3497_02835 db5dd648d621694d9f60b31928f72663 384 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 15 363 34.322 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 C3497_02835 db5dd648d621694d9f60b31928f72663 384 Pfam PF13393 Histidyl-tRNA synthetase 9 312 9.5E-120 T 14-10-2018 C3497_02835 db5dd648d621694d9f60b31928f72663 384 PIRSF PIRSF001549 3 356 2.8E-39 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 C3497_02835 db5dd648d621694d9f60b31928f72663 384 SUPERFAMILY SSF55681 5 316 4.73E-59 T 14-10-2018 C3497_07090 cb208f80e428d78391e8b7347e0f96ee 128 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 8 125 1.8E-37 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07090 cb208f80e428d78391e8b7347e0f96ee 128 PIRSF PIRSF000178 1 128 2.8E-28 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07090 cb208f80e428d78391e8b7347e0f96ee 128 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 123 3.9E-28 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07090 cb208f80e428d78391e8b7347e0f96ee 128 SUPERFAMILY SSF81343 6 128 8.01E-30 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07090 cb208f80e428d78391e8b7347e0f96ee 128 Gene3D G3DSA:1.20.1300.10 3 128 2.7E-39 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07740 34c64b2c266b3fe0903470b6dba6bd58 142 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 17 141 2.3E-64 T 14-10-2018 IPR030991 Cytochrome c-550 PedF C3497_07740 34c64b2c266b3fe0903470b6dba6bd58 142 SUPERFAMILY SSF46626 8 138 4.01E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_07740 34c64b2c266b3fe0903470b6dba6bd58 142 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 136 1.3E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_07740 34c64b2c266b3fe0903470b6dba6bd58 142 Gene3D G3DSA:1.10.760.10 46 142 1.3E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_07830 9b1dcbccb2041a85400e74816581c973 371 SUPERFAMILY SSF102114 8 314 3.66E-69 T 14-10-2018 C3497_07830 9b1dcbccb2041a85400e74816581c973 371 SMART SM00729 10 211 0.0045 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3497_07830 9b1dcbccb2041a85400e74816581c973 371 Pfam PF13186 Iron-sulfur cluster-binding domain 239 305 4.2E-7 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain C3497_07830 9b1dcbccb2041a85400e74816581c973 371 Pfam PF04055 Radical SAM superfamily 16 165 4.9E-23 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_07830 9b1dcbccb2041a85400e74816581c973 371 PIRSF PIRSF037420 2 353 4.4E-109 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E C3497_07830 9b1dcbccb2041a85400e74816581c973 371 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 7 354 3.1E-159 T 14-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 C3497_07830 9b1dcbccb2041a85400e74816581c973 371 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 371 187.528 T 14-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 C3497_07830 9b1dcbccb2041a85400e74816581c973 371 Gene3D G3DSA:3.20.20.70 11 283 6.7E-40 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_07830 9b1dcbccb2041a85400e74816581c973 371 Pfam PF13394 4Fe-4S single cluster domain 19 76 9.6E-6 T 14-10-2018 C3497_01170 7d283789a6e8bdaba7db1fb0694ebf6b 220 Gene3D G3DSA:1.10.10.10 123 219 3.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_01170 7d283789a6e8bdaba7db1fb0694ebf6b 220 SMART SM00862 145 216 4.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_01170 7d283789a6e8bdaba7db1fb0694ebf6b 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.2E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_01170 7d283789a6e8bdaba7db1fb0694ebf6b 220 Pfam PF00072 Response regulator receiver domain 4 112 7.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01170 7d283789a6e8bdaba7db1fb0694ebf6b 220 Gene3D G3DSA:3.40.50.2300 1 122 3.2E-40 T 14-10-2018 C3497_01170 7d283789a6e8bdaba7db1fb0694ebf6b 220 SMART SM00448 1 112 2.1E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01170 7d283789a6e8bdaba7db1fb0694ebf6b 220 SUPERFAMILY SSF52172 1 181 2.2E-38 T 14-10-2018 IPR011006 CheY-like superfamily C3497_02720 fdd330114ab9b3881c76336d98f838e3 349 Gene3D G3DSA:2.40.10.240 64 161 6.4E-112 T 14-10-2018 C3497_02720 fdd330114ab9b3881c76336d98f838e3 349 Gene3D G3DSA:3.40.1780.10 16 337 6.4E-112 T 14-10-2018 C3497_02720 fdd330114ab9b3881c76336d98f838e3 349 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 4 338 1.6E-125 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C3497_02720 fdd330114ab9b3881c76336d98f838e3 349 SUPERFAMILY SSF111337 6 338 2.09E-131 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C3497_02720 fdd330114ab9b3881c76336d98f838e3 349 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 3 339 45.852 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C3497_02720 fdd330114ab9b3881c76336d98f838e3 349 Pfam PF02547 Queuosine biosynthesis protein 5 338 9.8E-131 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 25 774 3.7E-275 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Gene3D G3DSA:3.10.20.310 93 173 1.4E-17 T 14-10-2018 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 PIRSF PIRSF006076 1 774 3.3E-261 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Gene3D G3DSA:2.40.160.50 426 774 4.0E-112 T 14-10-2018 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Gene3D G3DSA:3.10.20.310 349 425 4.5E-26 T 14-10-2018 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Gene3D G3DSA:3.10.20.310 269 344 1.2E-18 T 14-10-2018 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 774 25.814 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Gene3D G3DSA:3.10.20.310 176 267 1.5E-23 T 14-10-2018 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Gene3D G3DSA:3.10.20.310 20 92 3.0E-21 T 14-10-2018 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Pfam PF01103 Surface antigen 449 774 2.9E-78 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Pfam PF07244 Surface antigen variable number repeat 348 422 4.7E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Pfam PF07244 Surface antigen variable number repeat 94 173 2.5E-13 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Pfam PF07244 Surface antigen variable number repeat 267 345 2.6E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Pfam PF07244 Surface antigen variable number repeat 26 91 3.4E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C3497_07335 f24335e1bf9262f9c7fec3558dc34117 774 Pfam PF07244 Surface antigen variable number repeat 177 264 1.3E-18 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C3497_11405 2b5f254ef0c05574976ff8832d4bf5ea 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 43.333 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C3497_11405 2b5f254ef0c05574976ff8832d4bf5ea 195 Gene3D G3DSA:3.30.230.40 1 89 2.3E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 C3497_11405 2b5f254ef0c05574976ff8832d4bf5ea 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 1.5E-66 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C3497_11405 2b5f254ef0c05574976ff8832d4bf5ea 195 Gene3D G3DSA:3.30.230.40 90 195 2.4E-39 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 C3497_11405 2b5f254ef0c05574976ff8832d4bf5ea 195 SUPERFAMILY SSF54211 88 178 3.03E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_11405 2b5f254ef0c05574976ff8832d4bf5ea 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C3497_11405 2b5f254ef0c05574976ff8832d4bf5ea 195 SUPERFAMILY SSF54211 1 86 1.77E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_11405 2b5f254ef0c05574976ff8832d4bf5ea 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C3497_01900 cc308a0b435f24db3925ed1b60c29771 64 SUPERFAMILY SSF46561 1 61 1.06E-21 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01900 cc308a0b435f24db3925ed1b60c29771 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.9E-22 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01900 cc308a0b435f24db3925ed1b60c29771 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.184 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01900 cc308a0b435f24db3925ed1b60c29771 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01900 cc308a0b435f24db3925ed1b60c29771 64 Pfam PF00831 Ribosomal L29 protein 4 60 3.1E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01900 cc308a0b435f24db3925ed1b60c29771 64 Gene3D G3DSA:1.10.287.310 1 62 6.4E-28 T 14-10-2018 C3497_00425 cca22e7cba7e5e3fff4019136a315ce1 145 Gene3D G3DSA:3.20.80.10 1 144 7.6E-19 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily C3497_00425 cca22e7cba7e5e3fff4019136a315ce1 145 SUPERFAMILY SSF55136 5 143 3.49E-7 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily C3497_12525 edbb5f023c5bba4bd839f9bcd2df30fc 335 Pfam PF14206 Cysteine-rich CPCC 224 288 1.5E-5 T 14-10-2018 IPR025983 Cysteine-rich CPCC domain C3497_03150 8f6d11410e9bbbf07bd88bd39296234b 134 SMART SM00116 10 59 8.0E-8 T 14-10-2018 IPR000644 CBS domain C3497_03150 8f6d11410e9bbbf07bd88bd39296234b 134 SMART SM00116 77 124 6.7E-8 T 14-10-2018 IPR000644 CBS domain C3497_03150 8f6d11410e9bbbf07bd88bd39296234b 134 Pfam PF00571 CBS domain 3 58 3.9E-10 T 14-10-2018 IPR000644 CBS domain C3497_03150 8f6d11410e9bbbf07bd88bd39296234b 134 Pfam PF00571 CBS domain 70 124 5.0E-8 T 14-10-2018 IPR000644 CBS domain C3497_03150 8f6d11410e9bbbf07bd88bd39296234b 134 SUPERFAMILY SSF54631 2 127 1.52E-27 T 14-10-2018 C3497_03150 8f6d11410e9bbbf07bd88bd39296234b 134 Gene3D G3DSA:3.10.580.10 1 133 2.9E-30 T 14-10-2018 C3497_02345 72e00f73ae58dad03c4edc44ac3eafd8 366 Pfam PF02445 Quinolinate synthetase A protein 22 364 1.8E-100 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C3497_02345 72e00f73ae58dad03c4edc44ac3eafd8 366 Gene3D G3DSA:3.40.50.10800 32 346 2.7E-77 T 14-10-2018 C3497_02345 72e00f73ae58dad03c4edc44ac3eafd8 366 SUPERFAMILY SSF142754 25 364 3.27E-92 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C3497_02345 72e00f73ae58dad03c4edc44ac3eafd8 366 Gene3D G3DSA:3.40.50.10800 226 316 2.7E-77 T 14-10-2018 C3497_02345 72e00f73ae58dad03c4edc44ac3eafd8 366 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 17 366 1.5E-90 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C3497_02345 72e00f73ae58dad03c4edc44ac3eafd8 366 Gene3D G3DSA:3.40.50.10800 104 363 2.7E-77 T 14-10-2018 C3497_02345 72e00f73ae58dad03c4edc44ac3eafd8 366 Hamap MF_00569 Quinolinate synthase A [nadA]. 15 365 48.328 T 14-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C3497_01085 dc69790542e512a687f37d4c079398ac 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 1.9E-53 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3497_01085 dc69790542e512a687f37d4c079398ac 377 Gene3D G3DSA:1.20.140.10 232 377 3.2E-59 T 14-10-2018 C3497_01085 dc69790542e512a687f37d4c079398ac 377 Gene3D G3DSA:1.10.540.10 1 118 3.1E-44 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3497_01085 dc69790542e512a687f37d4c079398ac 377 Gene3D G3DSA:2.40.110.10 119 231 5.2E-46 T 14-10-2018 C3497_01085 dc69790542e512a687f37d4c079398ac 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 3.9E-29 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3497_01085 dc69790542e512a687f37d4c079398ac 377 SUPERFAMILY SSF56645 2 238 6.68E-87 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3497_01085 dc69790542e512a687f37d4c079398ac 377 SUPERFAMILY SSF47203 225 376 2.42E-61 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3497_01085 dc69790542e512a687f37d4c079398ac 377 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3497_01085 dc69790542e512a687f37d4c079398ac 377 PIRSF PIRSF016578 2 193 1.3E-15 T 14-10-2018 C3497_01085 dc69790542e512a687f37d4c079398ac 377 PIRSF PIRSF016578 218 377 1.0E-13 T 14-10-2018 C3497_01085 dc69790542e512a687f37d4c079398ac 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 1.9E-38 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3497_10790 11182a35278f34d586a03c3714b184b2 184 PIRSF PIRSF020680 1 183 2.5E-47 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 C3497_10790 11182a35278f34d586a03c3714b184b2 184 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 10 178 2.3E-45 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 C3497_10790 11182a35278f34d586a03c3714b184b2 184 Gene3D G3DSA:3.40.50.11310 6 180 3.9E-42 T 14-10-2018 IPR038058 PhnH-like superfamily C3497_10790 11182a35278f34d586a03c3714b184b2 184 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 13 177 4.9E-40 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 C3497_10790 11182a35278f34d586a03c3714b184b2 184 SUPERFAMILY SSF159709 13 179 1.96E-43 T 14-10-2018 IPR038058 PhnH-like superfamily C3497_02215 620573dddddeff2f5e028cfc4779f4a0 713 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 80 182 3.3E-17 T 14-10-2018 IPR029095 NarX-like, N-terminal C3497_02215 620573dddddeff2f5e028cfc4779f4a0 713 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 496 679 2.4E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_02215 620573dddddeff2f5e028cfc4779f4a0 713 Gene3D G3DSA:1.10.287.950 385 713 2.6E-61 T 14-10-2018 C3497_02215 620573dddddeff2f5e028cfc4779f4a0 713 SUPERFAMILY SSF58104 412 713 2.22E-62 T 14-10-2018 C3497_02215 620573dddddeff2f5e028cfc4779f4a0 713 SMART SM00283 451 712 2.3E-78 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_00985 77d043f522b041831689ede8b8b22258 323 Gene3D G3DSA:3.40.190.10 119 257 5.7E-106 T 14-10-2018 C3497_00985 77d043f522b041831689ede8b8b22258 323 Gene3D G3DSA:3.40.190.10 32 321 5.7E-106 T 14-10-2018 C3497_00985 77d043f522b041831689ede8b8b22258 323 Pfam PF16868 NMT1-like family 32 321 3.2E-94 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family C3497_00985 77d043f522b041831689ede8b8b22258 323 SUPERFAMILY SSF53850 27 323 4.19E-90 T 14-10-2018 C3497_00985 77d043f522b041831689ede8b8b22258 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 321 2.3E-110 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family C3497_02660 82e8740b1dee06d3842f4e2265f80ec3 300 Pfam PF00892 EamA-like transporter family 161 294 1.7E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_02660 82e8740b1dee06d3842f4e2265f80ec3 300 Pfam PF00892 EamA-like transporter family 21 146 1.5E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_02660 82e8740b1dee06d3842f4e2265f80ec3 300 SUPERFAMILY SSF103481 199 299 1.14E-11 T 14-10-2018 C3497_02660 82e8740b1dee06d3842f4e2265f80ec3 300 SUPERFAMILY SSF103481 46 150 1.31E-12 T 14-10-2018 C3497_04095 97e095e4f54fd32eb4f0eed773ddbd02 271 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_04095 97e095e4f54fd32eb4f0eed773ddbd02 271 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 35.11 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_04095 97e095e4f54fd32eb4f0eed773ddbd02 271 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 258 1.4E-77 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_04095 97e095e4f54fd32eb4f0eed773ddbd02 271 Gene3D G3DSA:3.20.20.70 1 270 4.9E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_04095 97e095e4f54fd32eb4f0eed773ddbd02 271 Pfam PF00290 Tryptophan synthase alpha chain 8 254 2.5E-88 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3497_04095 97e095e4f54fd32eb4f0eed773ddbd02 271 SUPERFAMILY SSF51366 1 252 2.26E-91 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 Gene3D G3DSA:3.90.600.10 328 424 6.2E-34 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 4.7E-35 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 SMART SM01210 328 420 5.1E-51 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 Gene3D G3DSA:3.30.1490.20 119 188 2.2E-25 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 SUPERFAMILY SSF56059 102 323 2.12E-64 T 14-10-2018 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 2.1E-30 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 8.5E-76 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 1.2E-169 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 Gene3D G3DSA:3.30.470.20 189 327 4.7E-59 T 14-10-2018 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 SMART SM01209 101 294 5.1E-135 T 14-10-2018 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 43.241 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 SUPERFAMILY SSF52440 1 101 1.87E-33 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 SUPERFAMILY SSF51246 327 420 2.3E-31 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C3497_11920 c417cb8b05ec5bdcadd9d6ba99c37950 424 Gene3D G3DSA:3.40.50.20 1 93 1.0E-35 T 14-10-2018 C3497_02605 31d84d75229c739607b35627cc862883 220 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_02605 31d84d75229c739607b35627cc862883 220 SUPERFAMILY SSF52540 1 217 1.45E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02605 31d84d75229c739607b35627cc862883 220 Gene3D G3DSA:3.40.50.300 1 219 3.3E-61 T 14-10-2018 C3497_02605 31d84d75229c739607b35627cc862883 220 SMART SM00382 27 215 4.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_02605 31d84d75229c739607b35627cc862883 220 Pfam PF00005 ABC transporter 19 166 3.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_07745 e501bbb2fb9ba1ffbcf1b372d483d00a 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 271 5.8E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF C3497_07745 e501bbb2fb9ba1ffbcf1b372d483d00a 282 SUPERFAMILY SSF53850 31 271 4.07E-24 T 14-10-2018 C3497_07745 e501bbb2fb9ba1ffbcf1b372d483d00a 282 Gene3D G3DSA:3.40.190.10 34 265 6.7E-21 T 14-10-2018 C3497_07745 e501bbb2fb9ba1ffbcf1b372d483d00a 282 Gene3D G3DSA:3.40.190.10 131 234 6.7E-21 T 14-10-2018 C3497_07530 7486d1d35a1027d7d3bd4fbb2955429b 196 SUPERFAMILY SSF46785 7 83 1.41E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_07530 7486d1d35a1027d7d3bd4fbb2955429b 196 Gene3D G3DSA:1.10.10.10 5 84 7.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_07530 7486d1d35a1027d7d3bd4fbb2955429b 196 PIRSF PIRSF019345 1 193 4.3E-60 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 C3497_07530 7486d1d35a1027d7d3bd4fbb2955429b 196 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 170 6.8E-51 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 C3497_07530 7486d1d35a1027d7d3bd4fbb2955429b 196 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 10 173 3.2E-35 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 C3497_07530 7486d1d35a1027d7d3bd4fbb2955429b 196 Gene3D G3DSA:1.10.10.10 85 181 1.7E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_07530 7486d1d35a1027d7d3bd4fbb2955429b 196 SUPERFAMILY SSF46785 86 162 1.03E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_11075 bd2c26f1545cc09e0bc31da6e74c1d45 718 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 656 1.1E-261 T 14-10-2018 IPR022458 Conjugative coupling factor TraG/TraD C3497_11075 bd2c26f1545cc09e0bc31da6e74c1d45 718 Gene3D G3DSA:3.40.50.300 158 330 3.2E-9 T 14-10-2018 C3497_11075 bd2c26f1545cc09e0bc31da6e74c1d45 718 Gene3D G3DSA:3.40.50.300 419 659 2.0E-25 T 14-10-2018 C3497_11075 bd2c26f1545cc09e0bc31da6e74c1d45 718 SUPERFAMILY SSF52540 153 659 3.11E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11075 bd2c26f1545cc09e0bc31da6e74c1d45 718 Pfam PF12696 TraM recognition site of TraD and TraG 508 635 6.9E-10 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site C3497_11075 bd2c26f1545cc09e0bc31da6e74c1d45 718 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 656 0.0 T 14-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 C3497_13870 7d7357c832fa8736e3267cdf43240ad3 269 Gene3D G3DSA:1.10.10.10 14 89 2.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_13870 7d7357c832fa8736e3267cdf43240ad3 269 Pfam PF01614 Bacterial transcriptional regulator 144 262 2.2E-12 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal C3497_13870 7d7357c832fa8736e3267cdf43240ad3 269 Gene3D G3DSA:3.30.450.40 94 261 2.1E-29 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_13870 7d7357c832fa8736e3267cdf43240ad3 269 SMART SM00346 16 106 3.3E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 C3497_13870 7d7357c832fa8736e3267cdf43240ad3 269 Pfam PF09339 IclR helix-turn-helix domain 18 69 1.9E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 C3497_13870 7d7357c832fa8736e3267cdf43240ad3 269 SUPERFAMILY SSF55781 83 266 6.54E-32 T 14-10-2018 C3497_13870 7d7357c832fa8736e3267cdf43240ad3 269 SUPERFAMILY SSF46785 16 88 1.1E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_04275 b3faae3ffcb9cecda9dbd07e1afff1a0 325 Gene3D G3DSA:3.40.190.10 124 267 5.3E-110 T 14-10-2018 C3497_04275 b3faae3ffcb9cecda9dbd07e1afff1a0 325 Gene3D G3DSA:3.40.190.10 39 309 5.3E-110 T 14-10-2018 C3497_04275 b3faae3ffcb9cecda9dbd07e1afff1a0 325 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 3 308 2.0E-78 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 C3497_04275 b3faae3ffcb9cecda9dbd07e1afff1a0 325 Pfam PF12849 PBP superfamily domain 37 295 1.8E-35 T 14-10-2018 IPR024370 PBP domain C3497_04275 b3faae3ffcb9cecda9dbd07e1afff1a0 325 SUPERFAMILY SSF53850 36 319 7.25E-69 T 14-10-2018 C3497_00545 058a5f2455de3818458fc91b9e986040 203 Pfam PF11736 Protein of unknown function (DUF3299) 55 194 2.2E-43 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 C3497_00545 058a5f2455de3818458fc91b9e986040 203 Gene3D G3DSA:2.40.50.870 49 200 1.8E-51 T 14-10-2018 C3497_11295 ccf2af76e63a40a9e8eadd609e6fe9d0 491 PRINTS PR00095 Anthranilate synthase component I signature 413 427 1.1E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_11295 ccf2af76e63a40a9e8eadd609e6fe9d0 491 PRINTS PR00095 Anthranilate synthase component I signature 333 346 1.1E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_11295 ccf2af76e63a40a9e8eadd609e6fe9d0 491 PRINTS PR00095 Anthranilate synthase component I signature 319 332 1.1E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_11295 ccf2af76e63a40a9e8eadd609e6fe9d0 491 PRINTS PR00095 Anthranilate synthase component I signature 428 442 1.1E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_11295 ccf2af76e63a40a9e8eadd609e6fe9d0 491 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 169 1.8E-30 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_11295 ccf2af76e63a40a9e8eadd609e6fe9d0 491 SUPERFAMILY SSF56322 14 481 5.76E-163 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C3497_11295 ccf2af76e63a40a9e8eadd609e6fe9d0 491 Gene3D G3DSA:3.60.120.10 1 487 3.6E-182 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C3497_11295 ccf2af76e63a40a9e8eadd609e6fe9d0 491 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 479 4.1E-169 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_11295 ccf2af76e63a40a9e8eadd609e6fe9d0 491 Pfam PF00425 chorismate binding enzyme 218 471 1.2E-101 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal C3497_00955 7367afb6a539396b348a18c9621296cc 509 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 3 434 6.4E-175 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 C3497_00955 7367afb6a539396b348a18c9621296cc 509 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 502 49.939 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 C3497_00955 7367afb6a539396b348a18c9621296cc 509 Gene3D G3DSA:1.10.510.10 271 397 3.2E-5 T 14-10-2018 C3497_00955 7367afb6a539396b348a18c9621296cc 509 Pfam PF03109 ABC1 family 108 225 2.0E-34 T 14-10-2018 IPR004147 UbiB domain C3497_00955 7367afb6a539396b348a18c9621296cc 509 SUPERFAMILY SSF56112 89 427 6.26E-48 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3497_12250 9f18757c58f13c5d897d3478cce2005b 184 Gene3D G3DSA:3.40.30.10 19 181 1.2E-38 T 14-10-2018 C3497_12250 9f18757c58f13c5d897d3478cce2005b 184 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3497_12250 9f18757c58f13c5d897d3478cce2005b 184 SUPERFAMILY SSF52833 39 179 9.49E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_12250 9f18757c58f13c5d897d3478cce2005b 184 Pfam PF08534 Redoxin 48 169 4.4E-24 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 C3497_01310 97e576c0fbf75142e085c91094fd0a66 278 PIRSF PIRSF026649 1 275 2.4E-73 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C3497_01310 97e576c0fbf75142e085c91094fd0a66 278 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 2 267 2.1E-33 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C3497_01865 689181bece2b573363e180499b1c68e6 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 203 8.9E-69 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01865 689181bece2b573363e180499b1c68e6 206 Pfam PF00573 Ribosomal protein L4/L1 family 18 203 1.5E-60 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 C3497_01865 689181bece2b573363e180499b1c68e6 206 SUPERFAMILY SSF52166 1 205 2.22E-68 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 C3497_01865 689181bece2b573363e180499b1c68e6 206 Gene3D G3DSA:3.40.1370.10 4 206 1.2E-63 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 C3497_01865 689181bece2b573363e180499b1c68e6 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 31.686 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_10500 f36178edaedb349839c6561da561e917 265 Gene3D G3DSA:3.40.630.30 59 232 1.3E-40 T 14-10-2018 C3497_10500 f36178edaedb349839c6561da561e917 265 SUPERFAMILY SSF55729 96 231 7.84E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_11870 17870da5a96a7b5518192d820a199547 335 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 39 324 1.4E-111 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 C3497_11870 17870da5a96a7b5518192d820a199547 335 SUPERFAMILY SSF53659 10 329 4.4E-114 T 14-10-2018 C3497_11870 17870da5a96a7b5518192d820a199547 335 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 13 328 3.1E-129 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 C3497_11870 17870da5a96a7b5518192d820a199547 335 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 10 331 36.868 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 C3497_11870 17870da5a96a7b5518192d820a199547 335 Gene3D G3DSA:3.40.718.10 4 332 8.3E-125 T 14-10-2018 C3497_02025 e4c5285b3e425e1e525a5d7d5e7db381 157 Gene3D G3DSA:2.40.50.140 1 121 3.4E-51 T 14-10-2018 C3497_02025 e4c5285b3e425e1e525a5d7d5e7db381 157 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 39.326 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 C3497_02025 e4c5285b3e425e1e525a5d7d5e7db381 157 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 157 3.6E-57 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 C3497_02025 e4c5285b3e425e1e525a5d7d5e7db381 157 SUPERFAMILY SSF50249 3 157 1.37E-60 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_02025 e4c5285b3e425e1e525a5d7d5e7db381 157 Pfam PF00436 Single-strand binding protein family 4 108 3.0E-45 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 C3497_11865 a80165769684f75231cf2c6a61384c6a 259 SMART SM00650 19 190 2.1E-81 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 C3497_11865 a80165769684f75231cf2c6a61384c6a 259 SUPERFAMILY SSF53335 3 257 4.37E-78 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_11865 a80165769684f75231cf2c6a61384c6a 259 Gene3D G3DSA:3.40.50.150 1 189 1.2E-65 T 14-10-2018 C3497_11865 a80165769684f75231cf2c6a61384c6a 259 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 3 256 2.6E-84 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 C3497_11865 a80165769684f75231cf2c6a61384c6a 259 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 3 257 56.713 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 C3497_11865 a80165769684f75231cf2c6a61384c6a 259 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 35 62 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 C3497_11865 a80165769684f75231cf2c6a61384c6a 259 Gene3D G3DSA:1.10.8.100 195 259 3.7E-23 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 C3497_11865 a80165769684f75231cf2c6a61384c6a 259 Pfam PF00398 Ribosomal RNA adenine dimethylase 3 257 9.2E-60 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 Gene3D G3DSA:1.20.1730.10 32 491 7.9E-12 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 893 906 4.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 849 4.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 863 4.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 869 887 4.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 SUPERFAMILY SSF47384 669 752 3.73E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 Pfam PF00512 His Kinase A (phospho-acceptor) domain 685 751 3.0E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 Gene3D G3DSA:3.30.565.10 756 919 3.2E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 SUPERFAMILY SSF55874 740 907 3.25E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 SMART SM00388 684 751 2.0E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 798 907 1.7E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 Gene3D G3DSA:1.10.287.130 667 753 6.8E-26 T 14-10-2018 C3497_08835 c1c4e6bcfbc672333fd07b784f4603a6 923 SMART SM00387 797 909 1.8E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_08160 4abdd725caf65764cf7e9b1344486378 101 Pfam PF00699 Urease beta subunit 3 100 4.0E-47 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08160 4abdd725caf65764cf7e9b1344486378 101 Gene3D G3DSA:2.10.150.10 1 101 1.7E-49 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08160 4abdd725caf65764cf7e9b1344486378 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.921 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08160 4abdd725caf65764cf7e9b1344486378 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 100 2.0E-46 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08160 4abdd725caf65764cf7e9b1344486378 101 SUPERFAMILY SSF51278 1 101 1.57E-48 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 Pfam PF00842 Alanine racemase, C-terminal domain 229 346 6.9E-40 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 Gene3D G3DSA:3.20.20.10 10 216 4.7E-129 T 14-10-2018 IPR029066 PLP-binding barrel C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 SUPERFAMILY SSF51419 8 230 7.2E-71 T 14-10-2018 IPR029066 PLP-binding barrel C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 Hamap MF_01201 Alanine racemase. 1 352 35.684 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 SMART SM01005 229 352 2.6E-65 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 SUPERFAMILY SSF50621 223 346 4.53E-44 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 PRINTS PR00992 Alanine racemase signature 245 260 2.1E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 PRINTS PR00992 Alanine racemase signature 25 41 2.1E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 PRINTS PR00992 Alanine racemase signature 191 218 2.1E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 PRINTS PR00992 Alanine racemase signature 262 277 2.1E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 PRINTS PR00992 Alanine racemase signature 60 78 2.1E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 PRINTS PR00992 Alanine racemase signature 120 132 2.1E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 PRINTS PR00992 Alanine racemase signature 283 300 2.1E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 PRINTS PR00992 Alanine racemase signature 154 165 2.1E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 PRINTS PR00992 Alanine racemase signature 335 348 2.1E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 TIGRFAM TIGR00492 alr: alanine racemase 3 346 4.4E-109 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 Gene3D G3DSA:2.40.37.10 8 347 4.7E-129 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C3497_13030 a4194e8dc73d24eca8ddc9552eaa161e 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 2.4E-71 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3497_07730 c2bce675be94050f5114bf0005525573 381 Gene3D G3DSA:2.120.10.30 32 380 7.9E-124 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like C3497_07730 c2bce675be94050f5114bf0005525573 381 SUPERFAMILY SSF50952 22 381 2.35E-51 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 C3497_07730 c2bce675be94050f5114bf0005525573 381 Pfam PF07995 Glucose / Sorbosone dehydrogenase 47 376 6.0E-138 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase C3497_03635 bee990383e5b03028887509e69ace60c 171 Pfam PF03477 ATP cone domain 50 136 2.3E-15 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 C3497_03635 bee990383e5b03028887509e69ace60c 171 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 145 7.9E-56 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 C3497_03635 bee990383e5b03028887509e69ace60c 171 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 83.165 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 C3497_02125 5a13e311e092d09815b8d303b1e74c3e 136 Pfam PF03653 Uncharacterised protein family (UPF0093) 3 136 4.0E-46 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 C3497_02125 5a13e311e092d09815b8d303b1e74c3e 136 PIRSF PIRSF004638 1 136 8.4E-51 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 C3497_06390 7649c71dd0fdcec99e8041f74250c313 358 SMART SM00729 36 244 1.8E-11 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3497_06390 7649c71dd0fdcec99e8041f74250c313 358 Pfam PF04055 Radical SAM superfamily 40 204 9.4E-32 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_06390 7649c71dd0fdcec99e8041f74250c313 358 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 27 358 2.8E-118 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_06390 7649c71dd0fdcec99e8041f74250c313 358 Pfam PF06463 Molybdenum Cofactor Synthesis C 213 338 3.5E-38 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_06390 7649c71dd0fdcec99e8041f74250c313 358 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 27 358 40.983 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_06390 7649c71dd0fdcec99e8041f74250c313 358 SUPERFAMILY SSF102114 27 319 9.55E-80 T 14-10-2018 C3497_06390 7649c71dd0fdcec99e8041f74250c313 358 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 42 53 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C3497_06390 7649c71dd0fdcec99e8041f74250c313 358 Pfam PF13353 4Fe-4S single cluster domain 43 129 2.8E-7 T 14-10-2018 C3497_06390 7649c71dd0fdcec99e8041f74250c313 358 Gene3D G3DSA:3.20.20.70 25 358 3.5E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_13390 2d90d2e810dcdb5cd2dcdebec7981ea4 433 Pfam PF03929 PepSY-associated TM region 8 411 3.2E-57 T 14-10-2018 IPR005625 PepSY-associated TM protein C3497_00480 e1dd9f01879a0caf459b898a747b6a05 459 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 172 430 3.6E-115 T 14-10-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 C3497_00480 e1dd9f01879a0caf459b898a747b6a05 459 Gene3D G3DSA:3.40.630.150 171 459 2.1E-112 T 14-10-2018 C3497_00480 e1dd9f01879a0caf459b898a747b6a05 459 Pfam PF17408 Malonyl-CoA decarboxylase N-terminal domain 82 169 1.4E-26 T 14-10-2018 IPR035372 Malonyl-CoA decarboxylase, N-terminal KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 C3497_00480 e1dd9f01879a0caf459b898a747b6a05 459 Gene3D G3DSA:1.20.140.90 24 168 2.8E-36 T 14-10-2018 IPR038351 Malonyl-CoA decarboxylase, N-terminal domain superfamily KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 C3497_11535 079353af79aa8d70bc489b2516ebc800 502 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 4 479 22.455 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 C3497_11535 079353af79aa8d70bc489b2516ebc800 502 Pfam PF00795 Carbon-nitrogen hydrolase 221 458 7.7E-29 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C3497_11535 079353af79aa8d70bc489b2516ebc800 502 SUPERFAMILY SSF56317 217 474 2.62E-42 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3497_11535 079353af79aa8d70bc489b2516ebc800 502 Gene3D G3DSA:3.60.110.10 217 469 1.2E-16 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3497_11535 079353af79aa8d70bc489b2516ebc800 502 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 58 441 7.9E-92 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 C3497_12655 6108f63e6b8ec68d6512edffc176717c 302 Gene3D G3DSA:3.10.290.10 63 115 1.4E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3497_12655 6108f63e6b8ec68d6512edffc176717c 302 Pfam PF01479 S4 domain 64 108 2.4E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_12655 6108f63e6b8ec68d6512edffc176717c 302 SUPERFAMILY SSF55120 125 300 3.84E-38 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_12655 6108f63e6b8ec68d6512edffc176717c 302 Pfam PF00849 RNA pseudouridylate synthase 126 266 1.9E-10 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_12655 6108f63e6b8ec68d6512edffc176717c 302 SUPERFAMILY SSF55174 64 155 5.63E-15 T 14-10-2018 C3497_12655 6108f63e6b8ec68d6512edffc176717c 302 SMART SM00363 64 121 5.4E-4 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_12655 6108f63e6b8ec68d6512edffc176717c 302 Gene3D G3DSA:3.30.2350.10 122 301 1.6E-45 T 14-10-2018 C3497_12655 6108f63e6b8ec68d6512edffc176717c 302 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 168 296 5.6E-39 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3497_08090 cfeaad448b76d9d6fdc21edbada16626 250 Pfam PF03061 Thioesterase superfamily 13 85 1.8E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3497_08090 cfeaad448b76d9d6fdc21edbada16626 250 Pfam PF03061 Thioesterase superfamily 142 214 2.7E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3497_08090 cfeaad448b76d9d6fdc21edbada16626 250 SUPERFAMILY SSF54637 4 119 9.31E-27 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_08090 cfeaad448b76d9d6fdc21edbada16626 250 Gene3D G3DSA:3.10.129.10 1 118 4.7E-33 T 14-10-2018 C3497_08090 cfeaad448b76d9d6fdc21edbada16626 250 Gene3D G3DSA:3.10.129.10 126 248 7.2E-39 T 14-10-2018 C3497_08090 cfeaad448b76d9d6fdc21edbada16626 250 SUPERFAMILY SSF54637 129 244 8.04E-35 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_08525 288b267811fbf0f7cb83002bf4cd4a79 203 Pfam PF04343 Protein of unknown function, DUF488 17 131 9.0E-25 T 14-10-2018 IPR007438 Protein of unknown function DUF488 C3497_05970 aaec050079430bddb93c571b8c23ac7f 133 SUPERFAMILY SSF52172 5 125 2.99E-37 T 14-10-2018 IPR011006 CheY-like superfamily C3497_05970 aaec050079430bddb93c571b8c23ac7f 133 Pfam PF00072 Response regulator receiver domain 9 120 4.5E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05970 aaec050079430bddb93c571b8c23ac7f 133 SMART SM00448 6 120 1.9E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05970 aaec050079430bddb93c571b8c23ac7f 133 Gene3D G3DSA:3.40.50.2300 1 127 2.5E-39 T 14-10-2018 C3497_00035 03b0dee590391ec4343b7582b69be0d7 295 SUPERFAMILY SSF74653 195 291 2.49E-14 T 14-10-2018 C3497_00035 03b0dee590391ec4343b7582b69be0d7 295 Gene3D G3DSA:3.30.1150.10 180 293 2.7E-25 T 14-10-2018 C3497_00035 03b0dee590391ec4343b7582b69be0d7 295 Pfam PF13103 TonB C terminal 206 288 3.2E-16 T 14-10-2018 C3497_00035 03b0dee590391ec4343b7582b69be0d7 295 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 239 290 1.4E-7 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C3497_08450 73c0d3b5b8fe76cbdf6c18ad4496cc98 182 SUPERFAMILY SSF53098 2 180 3.35E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_08450 73c0d3b5b8fe76cbdf6c18ad4496cc98 182 SMART SM00479 7 180 2.1E-20 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3497_08450 73c0d3b5b8fe76cbdf6c18ad4496cc98 182 Pfam PF00929 Exonuclease 9 170 2.4E-33 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3497_08450 73c0d3b5b8fe76cbdf6c18ad4496cc98 182 Gene3D G3DSA:3.30.420.10 1 181 5.6E-75 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_08450 73c0d3b5b8fe76cbdf6c18ad4496cc98 182 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.304 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 C3497_06035 b9d2036b9368fa8e480fa5ae1e254de5 316 Gene3D G3DSA:3.30.2010.10 73 160 4.1E-23 T 14-10-2018 C3497_06035 b9d2036b9368fa8e480fa5ae1e254de5 316 Pfam PF01435 Peptidase family M48 77 280 6.6E-34 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3497_09165 475db13fb5bb44f3d11816e283288ce7 471 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 113 1.5E-21 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 C3497_09165 475db13fb5bb44f3d11816e283288ce7 471 Pfam PF07196 Flagellin hook IN motif 145 195 1.0E-8 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 C3497_09165 475db13fb5bb44f3d11816e283288ce7 471 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 233 452 1.4E-45 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 C3497_12750 6bb109ff701c82a1ba5d62db6eabe6a1 259 SUPERFAMILY SSF52540 7 233 1.91E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12750 6bb109ff701c82a1ba5d62db6eabe6a1 259 Pfam PF00005 ABC transporter 27 173 9.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_12750 6bb109ff701c82a1ba5d62db6eabe6a1 259 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_12750 6bb109ff701c82a1ba5d62db6eabe6a1 259 SMART SM00382 33 220 9.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_12750 6bb109ff701c82a1ba5d62db6eabe6a1 259 Gene3D G3DSA:3.40.50.300 8 249 3.7E-63 T 14-10-2018 C3497_14675 eb83220830646cc5310ff3af641ebc19 298 PIRSF PIRSF038471 9 291 1.1E-74 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 C3497_14675 eb83220830646cc5310ff3af641ebc19 298 Gene3D G3DSA:2.40.10.350 187 264 1.1E-31 T 14-10-2018 C3497_14675 eb83220830646cc5310ff3af641ebc19 298 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 12 278 7.2E-49 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 C3497_14675 eb83220830646cc5310ff3af641ebc19 298 Pfam PF04085 rod shape-determining protein MreC 131 276 4.8E-36 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 C3497_14675 eb83220830646cc5310ff3af641ebc19 298 Gene3D G3DSA:2.40.10.340 128 275 1.1E-31 T 14-10-2018 C3497_08690 c0bd3d8825315a506a5a62b3596231ec 442 Gene3D G3DSA:3.40.50.150 138 439 2.6E-82 T 14-10-2018 C3497_08690 c0bd3d8825315a506a5a62b3596231ec 442 SUPERFAMILY SSF53335 138 439 8.9E-72 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_08690 c0bd3d8825315a506a5a62b3596231ec 442 Pfam PF01189 16S rRNA methyltransferase RsmB/F 240 437 7.8E-52 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 C3497_08690 c0bd3d8825315a506a5a62b3596231ec 442 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 250 260 3.0E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3497_08690 c0bd3d8825315a506a5a62b3596231ec 442 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 3.0E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3497_08690 c0bd3d8825315a506a5a62b3596231ec 442 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 3.0E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3497_08690 c0bd3d8825315a506a5a62b3596231ec 442 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 221 235 3.0E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3497_08690 c0bd3d8825315a506a5a62b3596231ec 442 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 422 439 3.0E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 SUPERFAMILY SSF52518 118 522 2.1E-90 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 Gene3D G3DSA:3.40.50.970 165 519 1.2E-143 T 14-10-2018 C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 Gene3D G3DSA:3.40.50.12470 556 806 2.1E-163 T 14-10-2018 C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 PIRSF PIRSF000157 1 940 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 Pfam PF00676 Dehydrogenase E1 component 211 513 3.1E-49 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 8 45 2.4E-17 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 SUPERFAMILY SSF52518 575 797 1.08E-50 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 SMART SM00861 593 790 6.0E-60 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 Pfam PF02779 Transketolase, pyrimidine binding domain 593 791 5.4E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 Gene3D G3DSA:3.40.50.11610 727 935 2.1E-163 T 14-10-2018 C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 Gene3D G3DSA:1.10.287.1150 82 164 5.8E-25 T 14-10-2018 C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 12 937 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 C3497_07060 fa15024be3edb0bad69babcf6387b1d3 951 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 795 938 8.0E-48 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 C3497_09000 21fed1b7d9ed97e0da651d097b2b82fb 296 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 51 65 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_09000 21fed1b7d9ed97e0da651d097b2b82fb 296 SUPERFAMILY SSF53790 44 280 8.51E-79 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3497_09000 21fed1b7d9ed97e0da651d097b2b82fb 296 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 47 257 1.5E-49 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3497_09000 21fed1b7d9ed97e0da651d097b2b82fb 296 Gene3D G3DSA:3.30.950.10 162 290 1.5E-43 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3497_09000 21fed1b7d9ed97e0da651d097b2b82fb 296 Gene3D G3DSA:3.40.1010.10 45 161 3.8E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3497_09000 21fed1b7d9ed97e0da651d097b2b82fb 296 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 46 281 1.1E-90 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_09000 21fed1b7d9ed97e0da651d097b2b82fb 296 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 126 159 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_11805 3282ffc32ddc9ca720b7b67f5194dfca 538 PIRSF PIRSF006630 243 538 1.4E-114 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C3497_11805 3282ffc32ddc9ca720b7b67f5194dfca 538 PIRSF PIRSF006630 2 245 2.4E-78 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C3497_11805 3282ffc32ddc9ca720b7b67f5194dfca 538 TIGRFAM TIGR00552 nadE: NAD+ synthetase 266 513 2.2E-58 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 C3497_11805 3282ffc32ddc9ca720b7b67f5194dfca 538 SUPERFAMILY SSF56317 3 239 2.88E-63 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3497_11805 3282ffc32ddc9ca720b7b67f5194dfca 538 Pfam PF00795 Carbon-nitrogen hydrolase 7 236 2.7E-23 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C3497_11805 3282ffc32ddc9ca720b7b67f5194dfca 538 SUPERFAMILY SSF52402 254 520 1.49E-75 T 14-10-2018 C3497_11805 3282ffc32ddc9ca720b7b67f5194dfca 538 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 536 29.539 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C3497_11805 3282ffc32ddc9ca720b7b67f5194dfca 538 Gene3D G3DSA:3.40.50.620 260 538 5.5E-116 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_11805 3282ffc32ddc9ca720b7b67f5194dfca 538 Pfam PF02540 NAD synthase 263 511 1.5E-71 T 14-10-2018 IPR022310 NAD/GMP synthase C3497_11805 3282ffc32ddc9ca720b7b67f5194dfca 538 Gene3D G3DSA:3.60.110.10 1 248 2.1E-90 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3497_00910 2498706a6d462f1c06d210d1cd499c45 203 SUPERFAMILY SSF52833 1 99 9.74E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_00910 2498706a6d462f1c06d210d1cd499c45 203 Gene3D G3DSA:3.40.30.10 7 198 1.5E-71 T 14-10-2018 C3497_00910 2498706a6d462f1c06d210d1cd499c45 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 77 1.0E-19 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3497_00910 2498706a6d462f1c06d210d1cd499c45 203 Gene3D G3DSA:1.20.1050.10 79 192 1.5E-71 T 14-10-2018 C3497_00910 2498706a6d462f1c06d210d1cd499c45 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 121 182 6.9E-10 T 14-10-2018 C3497_00910 2498706a6d462f1c06d210d1cd499c45 203 SUPERFAMILY SSF47616 69 200 9.95E-24 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C3497_00805 8bd253833a23c041edf2d293f1a6b6d4 440 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 15 437 3.0E-237 T 14-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 C3497_00805 8bd253833a23c041edf2d293f1a6b6d4 440 Gene3D G3DSA:3.40.50.12780 3 330 1.2E-145 T 14-10-2018 C3497_00805 8bd253833a23c041edf2d293f1a6b6d4 440 Gene3D G3DSA:3.30.300.30 331 438 3.5E-30 T 14-10-2018 C3497_00805 8bd253833a23c041edf2d293f1a6b6d4 440 SUPERFAMILY SSF56801 21 412 4.45E-68 T 14-10-2018 C3497_00805 8bd253833a23c041edf2d293f1a6b6d4 440 Pfam PF00501 AMP-binding enzyme 88 294 5.2E-18 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3497_00805 8bd253833a23c041edf2d293f1a6b6d4 440 PIRSF PIRSF006444 4 439 9.9E-213 T 14-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 C3497_00805 8bd253833a23c041edf2d293f1a6b6d4 440 Pfam PF14535 AMP-binding enzyme C-terminal domain 339 437 4.0E-25 T 14-10-2018 IPR028154 AMP-dependent ligase, C-terminal C3497_03665 553a02beb43ca6bff47cf1b8782788a9 446 Gene3D G3DSA:3.30.2290.10 3 232 6.0E-91 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal C3497_03665 553a02beb43ca6bff47cf1b8782788a9 446 SUPERFAMILY SSF111283 11 446 1.83E-130 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 C3497_03665 553a02beb43ca6bff47cf1b8782788a9 446 Pfam PF01523 Putative modulator of DNA gyrase 36 323 1.0E-61 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 C3497_08915 f49139c13f68b4bbeb27017924dda1af 266 Gene3D G3DSA:3.40.50.300 17 184 8.4E-30 T 14-10-2018 C3497_08915 f49139c13f68b4bbeb27017924dda1af 266 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 179 261 2.9E-30 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal C3497_08915 f49139c13f68b4bbeb27017924dda1af 266 Pfam PF07728 AAA domain (dynein-related subfamily) 33 166 6.8E-36 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 C3497_08915 f49139c13f68b4bbeb27017924dda1af 266 SUPERFAMILY SSF52540 21 205 1.15E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01420 da2341183126c7937626388a9e1a26f9 109 Gene3D G3DSA:2.20.130.30 36 109 1.1E-27 T 14-10-2018 C3497_01420 da2341183126c7937626388a9e1a26f9 109 Pfam PF11191 Protein of unknown function (DUF2782) 23 109 9.1E-35 T 14-10-2018 IPR021357 Protein of unknown function DUF2782 C3497_14270 c0741f95896a459cab65b9f577a96d58 541 SUPERFAMILY SSF52540 6 238 1.68E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14270 c0741f95896a459cab65b9f577a96d58 541 Pfam PF00005 ABC transporter 340 477 1.6E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_14270 c0741f95896a459cab65b9f577a96d58 541 SMART SM00382 26 238 1.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14270 c0741f95896a459cab65b9f577a96d58 541 SMART SM00382 348 530 2.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14270 c0741f95896a459cab65b9f577a96d58 541 Gene3D G3DSA:3.40.50.300 284 539 2.5E-55 T 14-10-2018 C3497_14270 c0741f95896a459cab65b9f577a96d58 541 Pfam PF12848 ABC transporter 224 305 2.1E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain C3497_14270 c0741f95896a459cab65b9f577a96d58 541 Gene3D G3DSA:3.40.50.300 4 279 3.5E-61 T 14-10-2018 C3497_14270 c0741f95896a459cab65b9f577a96d58 541 Pfam PF00005 ABC transporter 18 184 3.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_14270 c0741f95896a459cab65b9f577a96d58 541 SUPERFAMILY SSF52540 311 534 8.15E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12785 b72ef931f951e91b8aa57d43900c5ee6 610 Pfam PF00005 ABC transporter 378 528 5.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_12785 b72ef931f951e91b8aa57d43900c5ee6 610 Gene3D G3DSA:1.20.1560.10 23 344 1.7E-68 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3497_12785 b72ef931f951e91b8aa57d43900c5ee6 610 Gene3D G3DSA:3.40.50.300 351 602 2.7E-94 T 14-10-2018 C3497_12785 b72ef931f951e91b8aa57d43900c5ee6 610 SMART SM00382 387 574 9.2E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_12785 b72ef931f951e91b8aa57d43900c5ee6 610 Pfam PF00664 ABC transporter transmembrane region 39 311 1.0E-45 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C3497_12785 b72ef931f951e91b8aa57d43900c5ee6 610 SUPERFAMILY SSF90123 25 347 4.19E-66 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3497_12785 b72ef931f951e91b8aa57d43900c5ee6 610 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 23 600 2.6E-229 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 C3497_12785 b72ef931f951e91b8aa57d43900c5ee6 610 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_12785 b72ef931f951e91b8aa57d43900c5ee6 610 SUPERFAMILY SSF52540 351 596 3.88E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11750 457022f7341406ad946627ef5d9ad468 460 Gene3D G3DSA:3.40.190.10 115 210 1.4E-39 T 14-10-2018 C3497_11750 457022f7341406ad946627ef5d9ad468 460 SMART SM00062 32 254 8.1E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF C3497_11750 457022f7341406ad946627ef5d9ad468 460 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 253 5.9E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF C3497_11750 457022f7341406ad946627ef5d9ad468 460 Gene3D G3DSA:1.10.530.10 265 415 6.2E-32 T 14-10-2018 C3497_11750 457022f7341406ad946627ef5d9ad468 460 Pfam PF01464 Transglycosylase SLT domain 280 388 3.3E-23 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3497_11750 457022f7341406ad946627ef5d9ad468 460 SUPERFAMILY SSF53955 232 385 1.85E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_11750 457022f7341406ad946627ef5d9ad468 460 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 297 325 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 C3497_11750 457022f7341406ad946627ef5d9ad468 460 SUPERFAMILY SSF53850 33 253 2.4E-31 T 14-10-2018 C3497_11750 457022f7341406ad946627ef5d9ad468 460 Gene3D G3DSA:3.40.190.10 31 249 1.4E-39 T 14-10-2018 C3497_14265 e305178a7c4e29651663c3913b802578 165 Gene3D G3DSA:3.40.630.30 9 158 1.0E-28 T 14-10-2018 C3497_14265 e305178a7c4e29651663c3913b802578 165 Pfam PF00583 Acetyltransferase (GNAT) family 55 146 2.7E-17 T 14-10-2018 IPR000182 GNAT domain C3497_14265 e305178a7c4e29651663c3913b802578 165 SUPERFAMILY SSF55729 19 149 5.32E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_13760 9762549e9e9b553e9f0323f473321561 345 Gene3D G3DSA:3.40.50.2300 165 332 3.2E-22 T 14-10-2018 C3497_13760 9762549e9e9b553e9f0323f473321561 345 Pfam PF04392 ABC transporter substrate binding protein 156 335 2.3E-12 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein C3497_13760 9762549e9e9b553e9f0323f473321561 345 Gene3D G3DSA:3.40.50.2300 113 312 3.2E-22 T 14-10-2018 C3497_10980 5c39cb8f8db88132231d704d51057a6a 415 Pfam PF02321 Outer membrane efflux protein 27 212 6.7E-20 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_10980 5c39cb8f8db88132231d704d51057a6a 415 Pfam PF02321 Outer membrane efflux protein 237 412 1.4E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_10980 5c39cb8f8db88132231d704d51057a6a 415 SUPERFAMILY SSF56954 3 413 7.72E-60 T 14-10-2018 C3497_10980 5c39cb8f8db88132231d704d51057a6a 415 Gene3D G3DSA:1.20.1600.10 16 414 5.6E-61 T 14-10-2018 C3497_06095 65fe5928e1bc316235376f3484f8cce5 210 SUPERFAMILY SSF52540 7 206 6.3E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06095 65fe5928e1bc316235376f3484f8cce5 210 Pfam PF02223 Thymidylate kinase 13 199 4.4E-46 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 C3497_06095 65fe5928e1bc316235376f3484f8cce5 210 Hamap MF_00165 Thymidylate kinase [tmk]. 9 208 29.266 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 C3497_06095 65fe5928e1bc316235376f3484f8cce5 210 Gene3D G3DSA:3.40.50.300 5 208 1.0E-65 T 14-10-2018 C3497_06095 65fe5928e1bc316235376f3484f8cce5 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 8 200 5.2E-49 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 C3497_01065 ddb97a0f63a7d07c8ce7bd0f945e5802 145 Pfam PF13411 MerR HTH family regulatory protein 7 72 4.6E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_01065 ddb97a0f63a7d07c8ce7bd0f945e5802 145 Gene3D G3DSA:1.10.1660.10 1 127 1.1E-26 T 14-10-2018 C3497_01065 ddb97a0f63a7d07c8ce7bd0f945e5802 145 SUPERFAMILY SSF46955 7 121 6.59E-25 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3497_01065 ddb97a0f63a7d07c8ce7bd0f945e5802 145 SMART SM00422 7 74 4.6E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_01395 300df48c70b7ce020f1b2e61e627d18f 121 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 8.1E-36 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS C3497_01395 300df48c70b7ce020f1b2e61e627d18f 121 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.8E-26 T 14-10-2018 C3497_01395 300df48c70b7ce020f1b2e61e627d18f 121 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 23.99 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS C3497_01395 300df48c70b7ce020f1b2e61e627d18f 121 Gene3D G3DSA:3.30.460.10 1 116 9.5E-37 T 14-10-2018 C3497_01395 300df48c70b7ce020f1b2e61e627d18f 121 SUPERFAMILY SSF81301 1 112 1.08E-37 T 14-10-2018 C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 Pfam PF16326 ABC transporter C-terminal domain 575 638 2.9E-12 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 Gene3D G3DSA:1.10.287.380 557 641 1.1E-5 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 SUPERFAMILY SSF52540 1 256 1.0E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 SUPERFAMILY SSF52540 298 526 8.89E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 Pfam PF00005 ABC transporter 332 469 4.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 SMART SM00382 340 513 2.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 SMART SM00382 26 226 6.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 Pfam PF00005 ABC transporter 18 181 2.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 Gene3D G3DSA:3.40.50.300 278 548 6.6E-55 T 14-10-2018 C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 Gene3D G3DSA:3.40.50.300 2 277 8.1E-58 T 14-10-2018 C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_14195 a63dfc557fe98da9f0cf894deb62fc52 648 Pfam PF12848 ABC transporter 220 299 3.6E-27 T 14-10-2018 IPR032781 ABC-transporter extension domain C3497_11365 b92211019cbf2d22bd50c8e4efb29769 167 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 139 17.324 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 C3497_11365 b92211019cbf2d22bd50c8e4efb29769 167 Pfam PF02416 mttA/Hcf106 family 5 53 1.1E-9 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 C3497_11365 b92211019cbf2d22bd50c8e4efb29769 167 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 5.1E-18 T 14-10-2018 C3497_11365 b92211019cbf2d22bd50c8e4efb29769 167 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 5.1E-18 T 14-10-2018 C3497_11365 b92211019cbf2d22bd50c8e4efb29769 167 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 5.1E-18 T 14-10-2018 C3497_11365 b92211019cbf2d22bd50c8e4efb29769 167 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 69 4.0E-23 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 C3497_05915 d302f348c1ef91c8fb4f914695a6c7ad 110 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 5.3E-36 T 14-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 C3497_05915 d302f348c1ef91c8fb4f914695a6c7ad 110 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 10 97 2.0E-21 T 14-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 C3497_05915 d302f348c1ef91c8fb4f914695a6c7ad 110 Gene3D G3DSA:1.10.4000.10 1 110 4.2E-32 T 14-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily C3497_05915 d302f348c1ef91c8fb4f914695a6c7ad 110 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 20.134 T 14-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 C3497_05915 d302f348c1ef91c8fb4f914695a6c7ad 110 SUPERFAMILY SSF63592 1 97 1.7E-28 T 14-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily C3497_09535 fe3f4453daccdc33f3765cbda2d36675 296 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 294 8.2E-138 T 14-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 C3497_09535 fe3f4453daccdc33f3765cbda2d36675 296 Gene3D G3DSA:3.40.50.1100 37 142 7.1E-108 T 14-10-2018 C3497_09535 fe3f4453daccdc33f3765cbda2d36675 296 Gene3D G3DSA:3.40.50.1100 10 290 7.1E-108 T 14-10-2018 C3497_09535 fe3f4453daccdc33f3765cbda2d36675 296 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 294 3.8E-117 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 C3497_09535 fe3f4453daccdc33f3765cbda2d36675 296 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 C3497_09535 fe3f4453daccdc33f3765cbda2d36675 296 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 283 4.0E-65 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3497_09535 fe3f4453daccdc33f3765cbda2d36675 296 SUPERFAMILY SSF53686 3 291 6.29E-90 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3497_03850 344221252babb539fef454ec130ccee3 366 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 169 363 1.2E-30 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 C3497_03850 344221252babb539fef454ec130ccee3 366 Gene3D G3DSA:3.90.380.10 17 358 9.1E-40 T 14-10-2018 C3497_03850 344221252babb539fef454ec130ccee3 366 Pfam PF00355 Rieske [2Fe-2S] domain 43 121 3.3E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 C3497_03850 344221252babb539fef454ec130ccee3 366 SUPERFAMILY SSF55961 159 361 1.18E-39 T 14-10-2018 C3497_03850 344221252babb539fef454ec130ccee3 366 SUPERFAMILY SSF50022 7 140 8.64E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3497_03850 344221252babb539fef454ec130ccee3 366 Gene3D G3DSA:2.102.10.10 37 150 9.1E-40 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3497_08420 94d90f23f78be9c3b6413b7bd1ca0215 256 Pfam PF00753 Metallo-beta-lactamase superfamily 28 221 1.2E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_08420 94d90f23f78be9c3b6413b7bd1ca0215 256 SUPERFAMILY SSF56281 29 244 2.75E-29 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_08420 94d90f23f78be9c3b6413b7bd1ca0215 256 SMART SM00849 29 221 8.7E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_08420 94d90f23f78be9c3b6413b7bd1ca0215 256 Gene3D G3DSA:3.60.15.10 8 240 2.4E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_06470 3311a68041132bbc63ffa8e219f83da8 386 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 2 383 49.3 T 14-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 C3497_06470 3311a68041132bbc63ffa8e219f83da8 386 Gene3D G3DSA:3.40.640.10 56 284 1.1E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_06470 3311a68041132bbc63ffa8e219f83da8 386 Pfam PF00155 Aminotransferase class I and II 39 379 1.8E-64 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_06470 3311a68041132bbc63ffa8e219f83da8 386 Gene3D G3DSA:3.90.1150.10 36 373 1.1E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_06470 3311a68041132bbc63ffa8e219f83da8 386 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 19 379 2.4E-141 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 C3497_06470 3311a68041132bbc63ffa8e219f83da8 386 SUPERFAMILY SSF53383 3 381 3.16E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_10505 1d1737847ac6b337054eaea844ec34a3 429 SUPERFAMILY SSF56935 31 425 3.66E-13 T 14-10-2018 C3497_10505 1d1737847ac6b337054eaea844ec34a3 429 Pfam PF13609 Gram-negative porin 18 373 1.6E-7 T 14-10-2018 C3497_13080 36fc92c545615ab6c734ad2b879ad871 207 SUPERFAMILY SSF48695 21 184 1.08E-56 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily C3497_13080 36fc92c545615ab6c734ad2b879ad871 207 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 18 182 3.6E-74 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal C3497_13080 36fc92c545615ab6c734ad2b879ad871 207 Gene3D G3DSA:1.10.3820.10 6 188 1.2E-39 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily C3497_13080 36fc92c545615ab6c734ad2b879ad871 207 PIRSF PIRSF000013 2 192 8.0E-91 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 C3497_04755 f9efb8eb7a5933ab5583343e7b84b04f 281 Pfam PF07589 PEP-CTERM motif 254 276 1.2E-6 T 14-10-2018 IPR013424 PEP-CTERM protein-sorting domain C3497_04755 f9efb8eb7a5933ab5583343e7b84b04f 281 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 255 278 2.5E-6 T 14-10-2018 IPR013424 PEP-CTERM protein-sorting domain C3497_12605 1009654b5541616a3d7b1d94424e6391 104 SUPERFAMILY SSF50249 6 103 1.37E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_12605 1009654b5541616a3d7b1d94424e6391 104 PIRSF PIRSF003135 4 102 1.5E-14 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 C3497_12605 1009654b5541616a3d7b1d94424e6391 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 7 100 3.3E-29 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 C3497_12605 1009654b5541616a3d7b1d94424e6391 104 Hamap MF_00720 Primosomal replication protein N [priB]. 6 101 22.84 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 C3497_12605 1009654b5541616a3d7b1d94424e6391 104 Gene3D G3DSA:2.40.50.140 6 104 3.6E-30 T 14-10-2018 C3497_08630 c0a6e9e22a19d625a203763d092aff49 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 53 171 1.2E-11 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3497_08630 c0a6e9e22a19d625a203763d092aff49 451 Gene3D G3DSA:3.50.50.100 51 449 1.5E-82 T 14-10-2018 C3497_08630 c0a6e9e22a19d625a203763d092aff49 451 SUPERFAMILY SSF51905 176 306 2.45E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_08630 c0a6e9e22a19d625a203763d092aff49 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 54 73 1.7E-5 T 14-10-2018 C3497_08630 c0a6e9e22a19d625a203763d092aff49 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.7E-5 T 14-10-2018 C3497_08630 c0a6e9e22a19d625a203763d092aff49 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 331 353 1.7E-5 T 14-10-2018 C3497_08630 c0a6e9e22a19d625a203763d092aff49 451 SUPERFAMILY SSF51905 53 182 7.6E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_14010 a2a93cddae948149c621dce72c5f820a 398 Pfam PF13458 Periplasmic binding protein 26 339 2.7E-45 T 14-10-2018 IPR028081 Leucine-binding protein domain C3497_14010 a2a93cddae948149c621dce72c5f820a 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 1.0E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_14010 a2a93cddae948149c621dce72c5f820a 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 1.0E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_14010 a2a93cddae948149c621dce72c5f820a 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 1.0E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_14010 a2a93cddae948149c621dce72c5f820a 398 SUPERFAMILY SSF53822 24 390 3.53E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_14010 a2a93cddae948149c621dce72c5f820a 398 Gene3D G3DSA:3.40.50.2300 28 333 1.9E-70 T 14-10-2018 C3497_14010 a2a93cddae948149c621dce72c5f820a 398 Gene3D G3DSA:3.40.50.2300 147 275 1.9E-70 T 14-10-2018 C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 501 1.1E-153 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 PRINTS PR01806 Virulence factor MviN signature 33 52 4.1E-83 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 PRINTS PR01806 Virulence factor MviN signature 259 285 4.1E-83 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 PRINTS PR01806 Virulence factor MviN signature 157 178 4.1E-83 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 PRINTS PR01806 Virulence factor MviN signature 409 426 4.1E-83 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 PRINTS PR01806 Virulence factor MviN signature 357 376 4.1E-83 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 PRINTS PR01806 Virulence factor MviN signature 133 157 4.1E-83 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 PRINTS PR01806 Virulence factor MviN signature 52 68 4.1E-83 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 Pfam PF03023 MviN-like protein 28 464 1.0E-141 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 PIRSF PIRSF002869 1 511 1.4E-174 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_06660 db98792b982e00a887ee77c970b2d9c2 512 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 21.009 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3497_10370 70afacb724d0fc823170d8e47b2cb227 528 Gene3D G3DSA:3.30.300.30 426 528 5.4E-27 T 14-10-2018 C3497_10370 70afacb724d0fc823170d8e47b2cb227 528 SUPERFAMILY SSF56801 6 526 1.44E-142 T 14-10-2018 C3497_10370 70afacb724d0fc823170d8e47b2cb227 528 Pfam PF00501 AMP-binding enzyme 13 431 2.2E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3497_10370 70afacb724d0fc823170d8e47b2cb227 528 TIGRFAM TIGR03098 ligase_PEP_1: acyl-CoA ligase (AMP-forming), exosortase A-associated 6 523 6.0E-245 T 14-10-2018 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated C3497_10370 70afacb724d0fc823170d8e47b2cb227 528 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3497_10370 70afacb724d0fc823170d8e47b2cb227 528 Gene3D G3DSA:3.40.50.12780 2 424 2.3E-103 T 14-10-2018 C3497_10370 70afacb724d0fc823170d8e47b2cb227 528 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 516 9.3E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3497_11140 0f8940fa89183179bcd8ae09c1acc9cf 304 Pfam PF13280 WYL domain 122 195 2.5E-11 T 14-10-2018 IPR026881 WYL domain C3497_11140 0f8940fa89183179bcd8ae09c1acc9cf 304 PIRSF PIRSF015558 1 289 2.4E-86 T 14-10-2018 IPR016634 WYL domain protein, s026 type C3497_02000 36a9e894579cf8a6b65dde19a4eb0f21 350 SUPERFAMILY SSF51735 11 344 1.4E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_02000 36a9e894579cf8a6b65dde19a4eb0f21 350 Gene3D G3DSA:3.40.50.720 12 283 5.6E-144 T 14-10-2018 C3497_02000 36a9e894579cf8a6b65dde19a4eb0f21 350 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 12 344 5.5E-135 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 C3497_02000 36a9e894579cf8a6b65dde19a4eb0f21 350 Gene3D G3DSA:3.90.25.10 203 338 5.6E-144 T 14-10-2018 C3497_02000 36a9e894579cf8a6b65dde19a4eb0f21 350 Pfam PF16363 GDP-mannose 4,6 dehydratase 13 333 4.3E-57 T 14-10-2018 IPR016040 NAD(P)-binding domain C3497_05250 3524033ea23d2b49e9876b2a8f8cbca9 142 Pfam PF02576 RimP N-terminal domain 6 74 2.1E-20 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal C3497_05250 3524033ea23d2b49e9876b2a8f8cbca9 142 SUPERFAMILY SSF75420 3 74 2.62E-17 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily C3497_05250 3524033ea23d2b49e9876b2a8f8cbca9 142 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 142 22.894 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 C3497_05250 3524033ea23d2b49e9876b2a8f8cbca9 142 Gene3D G3DSA:3.30.300.70 1 71 1.3E-13 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily C3497_05250 3524033ea23d2b49e9876b2a8f8cbca9 142 SUPERFAMILY SSF74942 75 142 8.11E-18 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily C3497_05250 3524033ea23d2b49e9876b2a8f8cbca9 142 Pfam PF17384 RimP C-terminal SH3 domain 77 142 1.5E-15 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal C3497_08455 7411b1dd09f7a0ffef9d90f9b95ea22e 416 Gene3D G3DSA:3.30.2010.10 206 288 6.3E-30 T 14-10-2018 C3497_08455 7411b1dd09f7a0ffef9d90f9b95ea22e 416 Pfam PF01435 Peptidase family M48 210 414 1.7E-39 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3497_08455 7411b1dd09f7a0ffef9d90f9b95ea22e 416 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 28 206 2.4E-52 T 14-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 C3497_08455 7411b1dd09f7a0ffef9d90f9b95ea22e 416 SUPERFAMILY SSF103473 157 356 9.55E-6 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_08575 e9f52d4531af6eb588cfff47be597e0a 84 SUPERFAMILY SSF143100 1 62 7.06E-17 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like C3497_08575 e9f52d4531af6eb588cfff47be597e0a 84 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 65 2.8E-12 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system C3497_08575 e9f52d4531af6eb588cfff47be597e0a 84 Gene3D G3DSA:3.30.160.250 1 71 5.2E-16 T 14-10-2018 C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 Gene3D G3DSA:3.40.50.1820 10 268 2.6E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 Pfam PF12697 Alpha/beta hydrolase family 26 260 1.6E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 PRINTS PR00412 Epoxide hydrolase signature 30 48 1.0E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 PRINTS PR00412 Epoxide hydrolase signature 93 106 1.0E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 PRINTS PR00412 Epoxide hydrolase signature 107 120 1.0E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 PRINTS PR00412 Epoxide hydrolase signature 50 65 1.0E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 PRINTS PR00412 Epoxide hydrolase signature 243 265 1.0E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 SUPERFAMILY SSF53474 24 267 7.01E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 4.3E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 208 222 4.3E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 4.3E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_04525 a9f77e294cf834df2b422d3c0bd4923d 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 4.3E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_03945 9cc9b180171fd356ed17352d35076286 200 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 7 66 8.9E-31 T 14-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal C3497_03945 9cc9b180171fd356ed17352d35076286 200 Pfam PF05233 PHB accumulation regulatory domain 123 161 9.0E-14 T 14-10-2018 IPR007897 PHB accumulation regulatory C3497_03945 9cc9b180171fd356ed17352d35076286 200 Pfam PF05233 PHB accumulation regulatory domain 71 110 5.5E-19 T 14-10-2018 IPR007897 PHB accumulation regulatory C3497_03945 9cc9b180171fd356ed17352d35076286 200 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 6 112 1.9E-45 T 14-10-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 C3497_04100 0b5c458891a9fe1c2848903805b70a50 290 Pfam PF01039 Carboxyl transferase domain 102 243 3.9E-16 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 C3497_04100 0b5c458891a9fe1c2848903805b70a50 290 Gene3D G3DSA:3.90.226.10 28 290 1.7E-84 T 14-10-2018 C3497_04100 0b5c458891a9fe1c2848903805b70a50 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 286 3.7E-124 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_04100 0b5c458891a9fe1c2848903805b70a50 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 2.1E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_04100 0b5c458891a9fe1c2848903805b70a50 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 2.1E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_04100 0b5c458891a9fe1c2848903805b70a50 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 2.1E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_04100 0b5c458891a9fe1c2848903805b70a50 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 2.1E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_04100 0b5c458891a9fe1c2848903805b70a50 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 2.1E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_04100 0b5c458891a9fe1c2848903805b70a50 290 SUPERFAMILY SSF52096 28 287 1.18E-83 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_04100 0b5c458891a9fe1c2848903805b70a50 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 284 38.208 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3497_05960 f924416a65bc7ae38d4586ccbd193d2f 322 SUPERFAMILY SSF50341 16 163 5.36E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C3497_05960 f924416a65bc7ae38d4586ccbd193d2f 322 PIRSF PIRSF002867 1 318 1.0E-102 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV C3497_05960 f924416a65bc7ae38d4586ccbd193d2f 322 Gene3D G3DSA:3.40.50.2300 172 319 9.7E-24 T 14-10-2018 C3497_05960 f924416a65bc7ae38d4586ccbd193d2f 322 Pfam PF00072 Response regulator receiver domain 188 309 1.1E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05960 f924416a65bc7ae38d4586ccbd193d2f 322 SMART SM00260 17 160 1.4E-26 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_05960 f924416a65bc7ae38d4586ccbd193d2f 322 Pfam PF01584 CheW-like domain 22 162 5.3E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_05960 f924416a65bc7ae38d4586ccbd193d2f 322 SMART SM00448 185 310 2.6E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05960 f924416a65bc7ae38d4586ccbd193d2f 322 Gene3D G3DSA:2.40.50.180 45 160 2.9E-28 T 14-10-2018 C3497_05960 f924416a65bc7ae38d4586ccbd193d2f 322 Gene3D G3DSA:2.30.30.40 36 154 2.9E-28 T 14-10-2018 C3497_05960 f924416a65bc7ae38d4586ccbd193d2f 322 SUPERFAMILY SSF52172 183 315 3.13E-23 T 14-10-2018 IPR011006 CheY-like superfamily C3497_10640 a642677d7ea7e7ce867741b169f4ef77 185 Gene3D G3DSA:1.25.40.20 2 183 2.0E-43 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily C3497_10640 a642677d7ea7e7ce867741b169f4ef77 185 SUPERFAMILY SSF48403 16 165 4.7E-36 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily C3497_10640 a642677d7ea7e7ce867741b169f4ef77 185 SMART SM00248 112 141 0.049 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 C3497_10640 a642677d7ea7e7ce867741b169f4ef77 185 SMART SM00248 46 75 4.2 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 C3497_10640 a642677d7ea7e7ce867741b169f4ef77 185 SMART SM00248 79 108 6.7E-6 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 C3497_10640 a642677d7ea7e7ce867741b169f4ef77 185 Pfam PF12796 Ankyrin repeats (3 copies) 20 110 2.9E-11 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain C3497_07615 96ac18b844f902f5eb236995dde37f5c 174 Pfam PF11356 Type II secretion system protein C 21 147 3.1E-16 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal C3497_08950 ecfaae47328a345c2085211b6edbde3b 172 SMART SM00344 12 124 0.003 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 C3497_08950 ecfaae47328a345c2085211b6edbde3b 172 Pfam PF13404 AsnC-type helix-turn-helix domain 12 55 6.8E-7 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_08950 ecfaae47328a345c2085211b6edbde3b 172 Gene3D G3DSA:3.30.70.3460 36 172 1.6E-35 T 14-10-2018 C3497_08950 ecfaae47328a345c2085211b6edbde3b 172 SUPERFAMILY SSF46785 11 75 1.65E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_00225 e1e281c9bead48831093b54506f853ce 407 Gene3D G3DSA:2.40.30.10 126 264 3.3E-51 T 14-10-2018 C3497_00225 e1e281c9bead48831093b54506f853ce 407 Gene3D G3DSA:3.40.50.80 275 391 7.1E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_00225 e1e281c9bead48831093b54506f853ce 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 1.7E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3497_00225 e1e281c9bead48831093b54506f853ce 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 5.5E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3497_00225 e1e281c9bead48831093b54506f853ce 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 3 407 65.104 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 C3497_00225 e1e281c9bead48831093b54506f853ce 407 SUPERFAMILY SSF52343 255 402 2.23E-38 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_00225 e1e281c9bead48831093b54506f853ce 407 PIRSF PIRSF000044 1 407 2.7E-228 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 C3497_00225 e1e281c9bead48831093b54506f853ce 407 SUPERFAMILY SSF54292 40 124 1.85E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3497_00225 e1e281c9bead48831093b54506f853ce 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 5 407 8.2E-226 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 C3497_00225 e1e281c9bead48831093b54506f853ce 407 Gene3D G3DSA:3.10.20.30 35 125 8.1E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_00225 e1e281c9bead48831093b54506f853ce 407 SUPERFAMILY SSF63380 105 272 4.33E-37 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3497_00225 e1e281c9bead48831093b54506f853ce 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 39 115 2.1E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C3497_09100 2d3ed8d69ca58d78e41816e2971ad000 144 Pfam PF04352 ProQ/FINO family 20 119 1.4E-23 T 14-10-2018 IPR016103 ProQ/FinO domain C3497_09100 2d3ed8d69ca58d78e41816e2971ad000 144 SMART SM00945 16 123 3.0E-25 T 14-10-2018 IPR016103 ProQ/FinO domain C3497_09100 2d3ed8d69ca58d78e41816e2971ad000 144 SUPERFAMILY SSF48657 4 113 1.57E-28 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily C3497_09100 2d3ed8d69ca58d78e41816e2971ad000 144 Gene3D G3DSA:1.10.1710.10 2 111 9.4E-28 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily C3497_05445 d8eab929ec8529c7f4f5ae038e6bac14 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.9E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_05445 d8eab929ec8529c7f4f5ae038e6bac14 59 Pfam PF01783 Ribosomal L32p protein family 2 55 9.2E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_05445 d8eab929ec8529c7f4f5ae038e6bac14 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.62 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_05445 d8eab929ec8529c7f4f5ae038e6bac14 59 SUPERFAMILY SSF57829 2 56 2.44E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 C3497_08250 38eb6e6648bae4ed4d717add3901cff0 330 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 1 308 19.919 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C3497_08250 38eb6e6648bae4ed4d717add3901cff0 330 Pfam PF01867 CRISPR associated protein Cas1 8 289 1.6E-66 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C3497_08250 38eb6e6648bae4ed4d717add3901cff0 330 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 15 291 1.0E-49 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C3497_08250 38eb6e6648bae4ed4d717add3901cff0 330 Gene3D G3DSA:1.20.120.920 85 318 4.5E-64 T 14-10-2018 C3497_08720 2a6ee75d4edb5706c86460322093d892 194 Pfam PF09335 SNARE associated Golgi protein 53 157 5.5E-12 T 14-10-2018 IPR032816 SNARE associated Golgi protein C3497_04705 294289126fbe61738470a06eddb8ee15 136 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 108 1.4E-24 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like C3497_06000 b3fed9546ee8e94fe1ed80d4f45425a9 97 Pfam PF12112 Protein of unknown function (DUF3579) 5 89 1.1E-35 T 14-10-2018 IPR021969 Protein of unknown function DUF3579 C3497_06000 b3fed9546ee8e94fe1ed80d4f45425a9 97 Gene3D G3DSA:3.30.70.2340 1 96 1.5E-34 T 14-10-2018 C3497_14290 48046c5d6acb6faca4d182e2a1bc52a1 127 Gene3D G3DSA:3.40.50.510 1 127 4.5E-31 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 C3497_14290 48046c5d6acb6faca4d182e2a1bc52a1 127 SUPERFAMILY SSF53062 1 126 9.42E-30 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 C3497_14290 48046c5d6acb6faca4d182e2a1bc52a1 127 Pfam PF03610 PTS system fructose IIA component 3 106 1.4E-14 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 C3497_01050 7a79985962e4036e56737d79a97459ee 161 SUPERFAMILY SSF88723 5 123 4.91E-12 T 14-10-2018 IPR029060 PIN-like domain superfamily C3497_01050 7a79985962e4036e56737d79a97459ee 161 Pfam PF13470 PIN domain 6 117 7.4E-22 T 14-10-2018 IPR002716 PIN domain C3497_01050 7a79985962e4036e56737d79a97459ee 161 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 6 121 2.5E-9 T 14-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component C3497_14715 5da48188a87658365e7cfc8cbf162b68 279 Hamap MF_00188 Protease HtpX [htpX]. 5 277 28.746 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 C3497_14715 5da48188a87658365e7cfc8cbf162b68 279 Pfam PF01435 Peptidase family M48 67 277 4.4E-39 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3497_14715 5da48188a87658365e7cfc8cbf162b68 279 Gene3D G3DSA:3.30.2010.10 58 150 6.4E-32 T 14-10-2018 C3497_02355 3ef01ff1da058e746c8a985283e45db5 149 Gene3D G3DSA:2.60.120.10 6 149 9.5E-44 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_02355 3ef01ff1da058e746c8a985283e45db5 149 SUPERFAMILY SSF51182 14 130 1.86E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C3497_02355 3ef01ff1da058e746c8a985283e45db5 149 Pfam PF07883 Cupin domain 51 118 2.9E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel C3497_10960 0cebbdb8675175cfabff095d3698ee85 132 Pfam PF00034 Cytochrome c 44 123 7.0E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_10960 0cebbdb8675175cfabff095d3698ee85 132 Gene3D G3DSA:1.10.760.10 13 127 7.6E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_10960 0cebbdb8675175cfabff095d3698ee85 132 SUPERFAMILY SSF46626 19 126 1.03E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_02535 3252cb9a3060ee92522547f8665fcdae 200 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 187 4.2E-30 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain C3497_02535 3252cb9a3060ee92522547f8665fcdae 200 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 95 3.0E-29 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 C3497_02535 3252cb9a3060ee92522547f8665fcdae 200 Gene3D G3DSA:2.40.240.10 1 95 3.2E-30 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_02535 3252cb9a3060ee92522547f8665fcdae 200 Gene3D G3DSA:2.170.120.20 98 194 3.4E-27 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal C3497_02535 3252cb9a3060ee92522547f8665fcdae 200 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 22.473 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 C3497_02535 3252cb9a3060ee92522547f8665fcdae 200 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 186 2.1E-42 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 C3497_02535 3252cb9a3060ee92522547f8665fcdae 200 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 186 30.124 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 C3497_02535 3252cb9a3060ee92522547f8665fcdae 200 SUPERFAMILY SSF50715 1 194 2.96E-55 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3497_02535 3252cb9a3060ee92522547f8665fcdae 200 Pfam PF01386 Ribosomal L25p family 6 92 5.6E-24 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 C3497_06185 305a77e293007dd29d968209b7e0f2ae 157 Gene3D G3DSA:1.10.3100.20 3 156 9.6E-57 T 14-10-2018 C3497_06185 305a77e293007dd29d968209b7e0f2ae 157 Pfam PF03270 Protein of unknown function, DUF269 36 155 1.3E-49 T 14-10-2018 IPR004952 Uncharacterised protein family UPF0460 C3497_06185 305a77e293007dd29d968209b7e0f2ae 157 PIRSF PIRSF005788 1 157 6.1E-66 T 14-10-2018 IPR004952 Uncharacterised protein family UPF0460 C3497_06185 305a77e293007dd29d968209b7e0f2ae 157 TIGRFAM TIGR02935 TIGR02935: probable nitrogen fixation protein 17 155 8.6E-58 T 14-10-2018 IPR004952 Uncharacterised protein family UPF0460 C3497_03060 0b53673e0dfa916d1e535cd81893c68b 1205 SUPERFAMILY SSF52518 46 268 1.18E-16 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_03060 0b53673e0dfa916d1e535cd81893c68b 1205 SUPERFAMILY SSF52518 456 644 2.06E-11 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_03060 0b53673e0dfa916d1e535cd81893c68b 1205 Gene3D G3DSA:3.40.50.970 35 246 3.4E-23 T 14-10-2018 C3497_03060 0b53673e0dfa916d1e535cd81893c68b 1205 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 753 944 1.6E-18 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 C3497_03060 0b53673e0dfa916d1e535cd81893c68b 1205 SUPERFAMILY SSF52922 293 414 1.29E-6 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3497_03060 0b53673e0dfa916d1e535cd81893c68b 1205 Gene3D G3DSA:3.40.920.10 741 949 1.6E-17 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 C3497_03060 0b53673e0dfa916d1e535cd81893c68b 1205 SUPERFAMILY SSF53323 745 989 3.53E-26 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 C3497_06445 3c41c561079fab9109caafbfec5e2519 602 SUPERFAMILY SSF55785 234 330 3.49E-8 T 14-10-2018 IPR035965 PAS domain superfamily C3497_06445 3c41c561079fab9109caafbfec5e2519 602 SMART SM00419 535 583 6.1E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_06445 3c41c561079fab9109caafbfec5e2519 602 SMART SM00100 381 499 6.3E-17 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_06445 3c41c561079fab9109caafbfec5e2519 602 Pfam PF01814 Hemerythrin HHE cation binding domain 58 176 1.8E-9 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C3497_06445 3c41c561079fab9109caafbfec5e2519 602 Gene3D G3DSA:3.30.450.20 218 335 9.2E-8 T 14-10-2018 C3497_06445 3c41c561079fab9109caafbfec5e2519 602 SUPERFAMILY SSF46785 517 590 5.69E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_06445 3c41c561079fab9109caafbfec5e2519 602 SUPERFAMILY SSF51206 375 512 2.09E-27 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C3497_06445 3c41c561079fab9109caafbfec5e2519 602 Gene3D G3DSA:2.60.120.10 368 513 8.6E-30 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_06445 3c41c561079fab9109caafbfec5e2519 602 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 50 175 2.2E-28 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 C3497_06445 3c41c561079fab9109caafbfec5e2519 602 Gene3D G3DSA:1.10.10.10 514 591 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_06445 3c41c561079fab9109caafbfec5e2519 602 Pfam PF13545 Crp-like helix-turn-helix domain 519 589 5.0E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_06445 3c41c561079fab9109caafbfec5e2519 602 Gene3D G3DSA:1.20.120.50 45 182 6.5E-29 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C3497_06445 3c41c561079fab9109caafbfec5e2519 602 SUPERFAMILY SSF47188 44 177 1.14E-26 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C3497_06445 3c41c561079fab9109caafbfec5e2519 602 Pfam PF00027 Cyclic nucleotide-binding domain 401 483 1.9E-17 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_10030 9d934f44c25e0e833321234d44889601 825 Gene3D G3DSA:2.70.150.20 315 426 6.7E-35 T 14-10-2018 C3497_10030 9d934f44c25e0e833321234d44889601 825 Pfam PF00403 Heavy-metal-associated domain 108 168 1.4E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C3497_10030 9d934f44c25e0e833321234d44889601 825 SUPERFAMILY SSF81653 331 421 1.07E-24 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 C3497_10030 9d934f44c25e0e833321234d44889601 825 ProSitePatterns PS01229 Hypothetical cof family signature 2. 716 738 - T 14-10-2018 C3497_10030 9d934f44c25e0e833321234d44889601 825 Pfam PF00122 E1-E2 ATPase 327 499 3.5E-50 T 14-10-2018 C3497_10030 9d934f44c25e0e833321234d44889601 825 Pfam PF00702 haloacid dehalogenase-like hydrolase 517 729 1.1E-34 T 14-10-2018 C3497_10030 9d934f44c25e0e833321234d44889601 825 Gene3D G3DSA:3.40.50.1000 501 768 3.8E-71 T 14-10-2018 IPR023214 HAD superfamily C3497_10030 9d934f44c25e0e833321234d44889601 825 SUPERFAMILY SSF55008 101 176 3.27E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3497_10030 9d934f44c25e0e833321234d44889601 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 534 1.1E-21 T 14-10-2018 C3497_10030 9d934f44c25e0e833321234d44889601 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 372 386 1.1E-21 T 14-10-2018 C3497_10030 9d934f44c25e0e833321234d44889601 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 662 672 1.1E-21 T 14-10-2018 C3497_10030 9d934f44c25e0e833321234d44889601 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 716 735 1.1E-21 T 14-10-2018 C3497_10030 9d934f44c25e0e833321234d44889601 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 739 751 1.1E-21 T 14-10-2018 C3497_10030 9d934f44c25e0e833321234d44889601 825 Gene3D G3DSA:3.40.1110.10 531 647 3.8E-71 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C3497_10030 9d934f44c25e0e833321234d44889601 825 SUPERFAMILY SSF56784 519 816 1.48E-50 T 14-10-2018 IPR036412 HAD-like superfamily C3497_10030 9d934f44c25e0e833321234d44889601 825 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 17 99 8.9E-27 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase C3497_10030 9d934f44c25e0e833321234d44889601 825 Gene3D G3DSA:3.30.70.100 104 188 8.1E-14 T 14-10-2018 C3497_10030 9d934f44c25e0e833321234d44889601 825 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 294 799 8.2E-79 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C3497_10030 9d934f44c25e0e833321234d44889601 825 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 260 818 3.3E-164 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 C3497_10030 9d934f44c25e0e833321234d44889601 825 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 522 528 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 C3497_10030 9d934f44c25e0e833321234d44889601 825 SUPERFAMILY SSF81665 184 796 1.57E-14 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 C3497_10030 9d934f44c25e0e833321234d44889601 825 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 242 819 5.5E-151 T 14-10-2018 C3497_14500 3957c05137f85cb4c91461a4919670a6 156 SUPERFAMILY SSF47175 25 156 1.4E-37 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 C3497_14500 3957c05137f85cb4c91461a4919670a6 156 PIRSF PIRSF000027 9 156 8.2E-35 T 14-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 C3497_14500 3957c05137f85cb4c91461a4919670a6 156 Gene3D G3DSA:1.20.120.10 23 156 9.0E-37 T 14-10-2018 C3497_14500 3957c05137f85cb4c91461a4919670a6 156 Pfam PF01322 Cytochrome C' 29 154 1.5E-36 T 14-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 C3497_14500 3957c05137f85cb4c91461a4919670a6 156 PRINTS PR00608 Class II cytochrome C signature 143 154 1.0E-12 T 14-10-2018 IPR015984 Cytochrome c prime, subgroup C3497_14500 3957c05137f85cb4c91461a4919670a6 156 PRINTS PR00608 Class II cytochrome C signature 120 143 1.0E-12 T 14-10-2018 IPR015984 Cytochrome c prime, subgroup C3497_03750 4cf0c5cfcb297e1223de6157e0827786 175 Pfam PF08750 CNP1-like family 32 165 1.7E-49 T 14-10-2018 IPR014861 Uncharacterised domain CNP1 C3497_11425 5493353ed2bda6763e53bd9358e2dc86 130 Gene3D G3DSA:1.10.286.20 1 43 4.6E-7 T 14-10-2018 C3497_11425 5493353ed2bda6763e53bd9358e2dc86 130 SUPERFAMILY SSF54534 48 124 1.09E-17 T 14-10-2018 C3497_11425 5493353ed2bda6763e53bd9358e2dc86 130 Pfam PF14760 Rnk N-terminus 3 42 2.0E-11 T 14-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain C3497_11425 5493353ed2bda6763e53bd9358e2dc86 130 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 124 2.2E-19 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 C3497_11425 5493353ed2bda6763e53bd9358e2dc86 130 PIRSF PIRSF006092 13 127 8.1E-25 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 C3497_11425 5493353ed2bda6763e53bd9358e2dc86 130 Gene3D G3DSA:3.10.50.30 44 130 1.8E-25 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 C3497_09210 83837623991027d21f7a23ac183448fb 188 Gene3D G3DSA:3.40.50.300 3 187 1.2E-34 T 14-10-2018 C3497_09210 83837623991027d21f7a23ac183448fb 188 Pfam PF00005 ABC transporter 21 140 1.4E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_09210 83837623991027d21f7a23ac183448fb 188 SUPERFAMILY SSF52540 15 183 1.64E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09210 83837623991027d21f7a23ac183448fb 188 SMART SM00382 26 187 7.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00140 479f9beef9d38c02e4599ce03f462c07 305 Pfam PF08668 HDOD domain 28 222 1.3E-45 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_00140 479f9beef9d38c02e4599ce03f462c07 305 SUPERFAMILY SSF109604 18 292 1.16E-50 T 14-10-2018 C3497_00140 479f9beef9d38c02e4599ce03f462c07 305 Gene3D G3DSA:1.10.3210.10 25 284 5.7E-62 T 14-10-2018 C3497_08935 fc6b2e0e830934585bb62b06d478a080 247 Gene3D G3DSA:2.60.120.10 18 164 1.5E-42 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_08935 fc6b2e0e830934585bb62b06d478a080 247 SMART SM00100 32 150 4.8E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_08935 fc6b2e0e830934585bb62b06d478a080 247 SUPERFAMILY SSF46785 169 244 1.13E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_08935 fc6b2e0e830934585bb62b06d478a080 247 Gene3D G3DSA:1.10.10.10 165 245 1.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_08935 fc6b2e0e830934585bb62b06d478a080 247 Pfam PF00027 Cyclic nucleotide-binding domain 51 137 2.5E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_08935 fc6b2e0e830934585bb62b06d478a080 247 SMART SM00419 190 238 5.0E-8 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_08935 fc6b2e0e830934585bb62b06d478a080 247 Pfam PF13545 Crp-like helix-turn-helix domain 170 244 4.8E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_08935 fc6b2e0e830934585bb62b06d478a080 247 SUPERFAMILY SSF51206 21 159 3.54E-36 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C3497_07760 4bb8f49c391da12c19087e3d0e0b90b0 537 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 336 349 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3497_07760 4bb8f49c391da12c19087e3d0e0b90b0 537 SUPERFAMILY SSF52540 319 515 1.03E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07760 4bb8f49c391da12c19087e3d0e0b90b0 537 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 494 503 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3497_07760 4bb8f49c391da12c19087e3d0e0b90b0 537 Pfam PF01590 GAF domain 54 183 7.9E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 C3497_07760 4bb8f49c391da12c19087e3d0e0b90b0 537 SUPERFAMILY SSF55781 47 187 2.94E-5 T 14-10-2018 C3497_07760 4bb8f49c391da12c19087e3d0e0b90b0 537 Pfam PF14532 Sigma-54 interaction domain 319 456 3.1E-13 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3497_07760 4bb8f49c391da12c19087e3d0e0b90b0 537 Gene3D G3DSA:3.30.450.40 7 189 1.7E-48 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_07760 4bb8f49c391da12c19087e3d0e0b90b0 537 Gene3D G3DSA:3.40.50.300 315 456 2.2E-25 T 14-10-2018 C3497_07760 4bb8f49c391da12c19087e3d0e0b90b0 537 Gene3D G3DSA:1.10.8.60 458 530 2.7E-9 T 14-10-2018 C3497_07760 4bb8f49c391da12c19087e3d0e0b90b0 537 SMART SM00382 332 470 4.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 Gene3D G3DSA:3.40.50.300 154 336 1.7E-61 T 14-10-2018 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 Gene3D G3DSA:1.10.10.60 413 480 4.1E-13 T 14-10-2018 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 SMART SM00448 6 117 5.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 Pfam PF02954 Bacterial regulatory protein, Fis family 436 476 4.4E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 Pfam PF00158 Sigma-54 interaction domain 170 331 7.7E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 SUPERFAMILY SSF46689 378 478 2.69E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 Gene3D G3DSA:3.40.50.2300 5 141 7.6E-34 T 14-10-2018 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 SUPERFAMILY SSF52540 169 407 7.55E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 378 387 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 SUPERFAMILY SSF52172 6 208 5.69E-37 T 14-10-2018 IPR011006 CheY-like superfamily C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 Gene3D G3DSA:1.10.8.60 337 412 4.9E-18 T 14-10-2018 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 SMART SM00382 185 328 2.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 459 7.4E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 459 479 7.4E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 189 202 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 Pfam PF00072 Response regulator receiver domain 8 116 4.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_00620 71c2716342bb7de5cd1ee5f6b19fa115 491 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 251 266 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3497_11765 6485dd18710947ebc4edd83e3454f327 448 Pfam PF12002 MgsA AAA+ ATPase C terminal 260 426 5.0E-64 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal C3497_11765 6485dd18710947ebc4edd83e3454f327 448 SMART SM00382 48 164 2.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_11765 6485dd18710947ebc4edd83e3454f327 448 Gene3D G3DSA:3.40.50.300 5 162 5.0E-45 T 14-10-2018 C3497_11765 6485dd18710947ebc4edd83e3454f327 448 Gene3D G3DSA:1.10.3710.10 338 437 6.9E-34 T 14-10-2018 C3497_11765 6485dd18710947ebc4edd83e3454f327 448 SUPERFAMILY SSF48019 244 426 1.98E-70 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 C3497_11765 6485dd18710947ebc4edd83e3454f327 448 Pfam PF16193 AAA C-terminal domain 184 259 6.7E-21 T 14-10-2018 IPR032423 AAA C-terminal domain C3497_11765 6485dd18710947ebc4edd83e3454f327 448 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 157 5.3E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_11765 6485dd18710947ebc4edd83e3454f327 448 SUPERFAMILY SSF52540 6 223 1.49E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11765 6485dd18710947ebc4edd83e3454f327 448 Gene3D G3DSA:1.20.272.10 234 337 3.9E-40 T 14-10-2018 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.322 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.3E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.3E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.3E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.3E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.3E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 SMART SM00562 3 140 2.2E-84 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 SUPERFAMILY SSF54919 1 139 1.24E-59 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 Gene3D G3DSA:3.30.70.141 1 141 3.3E-61 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_02765 b10d0edd4d91e7af300907b6a35bd9a2 142 Pfam PF00334 Nucleoside diphosphate kinase 4 136 1.2E-56 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 8.4E-20 T 14-10-2018 C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 Gene3D G3DSA:1.10.10.10 4 55 2.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 SUPERFAMILY SSF46785 2 93 3.95E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 Gene3D G3DSA:3.30.70.920 56 140 1.6E-21 T 14-10-2018 C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 SMART SM00418 1 89 0.0083 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 SUPERFAMILY SSF54909 63 152 4.16E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 4.3E-19 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain C3497_03100 2240d5f0a2b1293e5a3d8500dee2275f 152 SMART SM00344 3 112 1.3E-37 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 C3497_07320 a8a2e7cc5a444c64e0fa5663cccf977a 145 SUPERFAMILY SSF54637 3 142 4.63E-49 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_07320 a8a2e7cc5a444c64e0fa5663cccf977a 145 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 143 36.367 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3497_07320 a8a2e7cc5a444c64e0fa5663cccf977a 145 Gene3D G3DSA:3.10.129.10 1 144 2.6E-60 T 14-10-2018 C3497_07320 a8a2e7cc5a444c64e0fa5663cccf977a 145 Pfam PF07977 FabA-like domain 10 135 1.3E-39 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3497_07320 a8a2e7cc5a444c64e0fa5663cccf977a 145 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 140 1.4E-61 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3497_06835 8155f1761565ec3a4aa642c17a29e087 151 SMART SM00448 5 130 3.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_06835 8155f1761565ec3a4aa642c17a29e087 151 Gene3D G3DSA:3.40.50.2300 2 147 9.8E-34 T 14-10-2018 C3497_06835 8155f1761565ec3a4aa642c17a29e087 151 SUPERFAMILY SSF52172 4 133 7.4E-32 T 14-10-2018 IPR011006 CheY-like superfamily C3497_06835 8155f1761565ec3a4aa642c17a29e087 151 Pfam PF00072 Response regulator receiver domain 7 130 3.9E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_14280 e7471463778090365760d47cbd067380 213 Gene3D G3DSA:1.20.58.220 23 213 5.7E-44 T 14-10-2018 IPR038078 PhoU-like domain superfamily C3497_14280 e7471463778090365760d47cbd067380 213 Pfam PF01865 Protein of unknown function DUF47 23 210 4.2E-13 T 14-10-2018 IPR018445 Putative phosphate transport regulator C3497_14060 19f0aef89856015f6773c8dc88f9432b 379 Gene3D G3DSA:1.20.1250.20 1 374 7.9E-51 T 14-10-2018 C3497_14060 19f0aef89856015f6773c8dc88f9432b 379 SUPERFAMILY SSF103473 1 373 3.66E-61 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_14060 19f0aef89856015f6773c8dc88f9432b 379 Pfam PF07690 Major Facilitator Superfamily 1 221 9.6E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_14060 19f0aef89856015f6773c8dc88f9432b 379 Pfam PF07690 Major Facilitator Superfamily 230 372 3.3E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_06065 53a6778a1f1953b1577d425f0af852c5 159 Gene3D G3DSA:2.40.440.10 1 159 1.9E-30 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like C3497_06065 53a6778a1f1953b1577d425f0af852c5 159 Pfam PF03734 L,D-transpeptidase catalytic domain 2 157 9.0E-19 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 C3497_06065 53a6778a1f1953b1577d425f0af852c5 159 SUPERFAMILY SSF141523 2 158 9.94E-25 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like C3497_10555 31a0a8eceac075c9bfbb4db55437baaa 243 Pfam PF07103 Protein of unknown function (DUF1365) 1 235 3.7E-61 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 C3497_03505 68355a211aa88598a04d646fec710876 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.735 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C3497_03505 68355a211aa88598a04d646fec710876 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.7E-44 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C3497_03505 68355a211aa88598a04d646fec710876 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 8.0E-31 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C3497_03505 68355a211aa88598a04d646fec710876 90 Gene3D G3DSA:1.10.3880.10 1 90 1.5E-41 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 C3497_03505 68355a211aa88598a04d646fec710876 90 SUPERFAMILY SSF111148 1 89 7.59E-41 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 C3497_03505 68355a211aa88598a04d646fec710876 90 PIRSF PIRSF029827 1 90 6.2E-40 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C3497_07235 6d9703bd10297cd8796cb5049f47a873 1065 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 6 1065 13.804 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_07235 6d9703bd10297cd8796cb5049f47a873 1065 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 279 727 8.1E-134 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_07235 6d9703bd10297cd8796cb5049f47a873 1065 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 1009 2.4E-146 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_07235 6d9703bd10297cd8796cb5049f47a873 1065 Gene3D G3DSA:3.20.20.140 1 256 1.1E-52 T 14-10-2018 C3497_07235 6d9703bd10297cd8796cb5049f47a873 1065 SUPERFAMILY SSF89550 6 86 1.96E-6 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 C3497_07235 6d9703bd10297cd8796cb5049f47a873 1065 Pfam PF14579 Helix-hairpin-helix motif 801 897 3.0E-23 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_07235 6d9703bd10297cd8796cb5049f47a873 1065 SMART SM00481 7 76 8.5E-11 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal C3497_07235 6d9703bd10297cd8796cb5049f47a873 1065 Pfam PF02811 PHP domain 8 119 2.5E-13 T 14-10-2018 IPR004013 PHP domain GO:0003824 C3497_01220 b27e4fb488a4990c5af7b8d1a2e3c112 188 SMART SM00260 19 164 6.5E-34 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_01220 b27e4fb488a4990c5af7b8d1a2e3c112 188 Pfam PF01584 CheW-like domain 23 165 1.6E-39 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3497_01220 b27e4fb488a4990c5af7b8d1a2e3c112 188 Gene3D G3DSA:2.40.50.180 42 159 1.1E-40 T 14-10-2018 C3497_01220 b27e4fb488a4990c5af7b8d1a2e3c112 188 Gene3D G3DSA:2.30.30.40 25 158 1.1E-40 T 14-10-2018 C3497_01220 b27e4fb488a4990c5af7b8d1a2e3c112 188 SUPERFAMILY SSF50341 19 168 2.35E-39 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C3497_11245 d88b9187c94fe90b6ce03e8b8dc80f02 99 Pfam PF01381 Helix-turn-helix 29 81 4.7E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_11245 d88b9187c94fe90b6ce03e8b8dc80f02 99 Gene3D G3DSA:1.10.260.40 8 92 4.5E-16 T 14-10-2018 C3497_11245 d88b9187c94fe90b6ce03e8b8dc80f02 99 SUPERFAMILY SSF47413 23 88 1.44E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3497_11245 d88b9187c94fe90b6ce03e8b8dc80f02 99 SMART SM00530 28 83 7.1E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_12820 469f1e55ee0f650325ae1adb159fdc3e 366 Gene3D G3DSA:3.40.50.2000 2 172 2.6E-16 T 14-10-2018 C3497_12820 469f1e55ee0f650325ae1adb159fdc3e 366 Pfam PF00534 Glycosyl transferases group 1 184 334 7.7E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3497_12820 469f1e55ee0f650325ae1adb159fdc3e 366 Pfam PF13439 Glycosyltransferase Family 4 7 166 1.2E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_12820 469f1e55ee0f650325ae1adb159fdc3e 366 SUPERFAMILY SSF53756 4 358 2.23E-66 T 14-10-2018 C3497_12820 469f1e55ee0f650325ae1adb159fdc3e 366 Gene3D G3DSA:3.40.50.2000 173 344 2.4E-35 T 14-10-2018 C3497_03675 2fc6a1c3171fb9eecbe0e49882ab94d9 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 5 147 3.4E-37 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_03675 2fc6a1c3171fb9eecbe0e49882ab94d9 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 70 83 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 C3497_03675 2fc6a1c3171fb9eecbe0e49882ab94d9 195 SUPERFAMILY SSF53218 4 189 2.09E-48 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C3497_03675 2fc6a1c3171fb9eecbe0e49882ab94d9 195 SMART SM00852 8 154 4.7E-23 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_03675 2fc6a1c3171fb9eecbe0e49882ab94d9 195 Pfam PF00994 Probable molybdopterin binding domain 9 147 6.0E-29 T 14-10-2018 IPR001453 MoaB/Mog domain C3497_03675 2fc6a1c3171fb9eecbe0e49882ab94d9 195 Gene3D G3DSA:3.40.980.10 2 194 1.3E-62 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C3497_04465 d0ee75c18a432b969fa6cc65778f4b8a 184 Pfam PF00293 NUDIX domain 49 162 2.6E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3497_04465 d0ee75c18a432b969fa6cc65778f4b8a 184 Gene3D G3DSA:3.90.79.10 12 180 5.9E-54 T 14-10-2018 C3497_04465 d0ee75c18a432b969fa6cc65778f4b8a 184 ProSitePatterns PS00893 Nudix box signature. 82 103 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3497_04465 d0ee75c18a432b969fa6cc65778f4b8a 184 SUPERFAMILY SSF55811 14 180 3.79E-47 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3497_10935 b5e61981ac78b3cd20185e05dc27501d 131 Pfam PF16986 Heavy-metal resistance protein CzcE 53 128 2.7E-27 T 14-10-2018 IPR031560 Heavy-metal resistance protein CzcE C3497_10935 b5e61981ac78b3cd20185e05dc27501d 131 Gene3D G3DSA:2.60.40.2280 40 130 1.4E-22 T 14-10-2018 IPR038674 CzcE superfamily C3497_03115 dbcc98386055e3f02c42c7bde7c2aa81 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 C3497_03115 dbcc98386055e3f02c42c7bde7c2aa81 475 Pfam PF00171 Aldehyde dehydrogenase family 13 469 1.8E-156 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3497_03115 dbcc98386055e3f02c42c7bde7c2aa81 475 SUPERFAMILY SSF53720 3 470 3.4E-153 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3497_03115 dbcc98386055e3f02c42c7bde7c2aa81 475 Gene3D G3DSA:3.40.605.10 9 467 6.8E-165 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3497_03115 dbcc98386055e3f02c42c7bde7c2aa81 475 Gene3D G3DSA:3.40.309.10 249 440 6.8E-165 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3497_10535 7fe5d93e50929ffaf559fd629f8087d2 176 Pfam PF12915 Protein of unknown function (DUF3833) 12 173 3.1E-71 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 C3497_02265 135a83b058ef0d5ac20777af65d89e68 340 Gene3D G3DSA:2.40.40.10 241 339 2.5E-42 T 14-10-2018 IPR036908 RlpA-like domain superfamily C3497_02265 135a83b058ef0d5ac20777af65d89e68 340 Pfam PF03562 MltA specific insert domain 4 236 1.4E-87 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 C3497_02265 135a83b058ef0d5ac20777af65d89e68 340 Gene3D G3DSA:2.40.40.10 1 82 4.6E-21 T 14-10-2018 IPR036908 RlpA-like domain superfamily C3497_02265 135a83b058ef0d5ac20777af65d89e68 340 SUPERFAMILY SSF50685 2 336 1.08E-135 T 14-10-2018 IPR036908 RlpA-like domain superfamily C3497_02265 135a83b058ef0d5ac20777af65d89e68 340 PIRSF PIRSF019422 1 338 2.5E-136 T 14-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A C3497_02265 135a83b058ef0d5ac20777af65d89e68 340 Pfam PF06725 3D domain 257 330 2.9E-25 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 C3497_02265 135a83b058ef0d5ac20777af65d89e68 340 SMART SM00925 79 236 2.2E-92 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 C3497_02265 135a83b058ef0d5ac20777af65d89e68 340 Gene3D G3DSA:2.40.240.50 83 238 2.1E-63 T 14-10-2018 C3497_07945 325501541b24940cb3000cd9b689e121 723 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 162 585 3.1E-49 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain C3497_07945 325501541b24940cb3000cd9b689e121 723 SUPERFAMILY SSF53850 162 660 1.43E-85 T 14-10-2018 C3497_07945 325501541b24940cb3000cd9b689e121 723 Gene3D G3DSA:3.10.105.10 400 643 3.3E-48 T 14-10-2018 C3497_07945 325501541b24940cb3000cd9b689e121 723 PIRSF PIRSF002741 1 83 6.2 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 C3497_07945 325501541b24940cb3000cd9b689e121 723 PIRSF PIRSF002741 161 669 1.7E-50 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 C3497_02280 33edb23c253aa2c9d3ffca5bf14d8558 64 Gene3D G3DSA:3.30.50.10 4 64 2.3E-23 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 C3497_02280 33edb23c253aa2c9d3ffca5bf14d8558 64 SUPERFAMILY SSF57716 6 61 1.14E-19 T 14-10-2018 C3497_02280 33edb23c253aa2c9d3ffca5bf14d8558 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 5 62 18.62 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 C3497_02280 33edb23c253aa2c9d3ffca5bf14d8558 64 Pfam PF03884 DNA gyrase inhibitor YacG 9 58 8.3E-25 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 C3497_14690 1a6888ba11a1d5ebdaae14b462ffeb1d 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 475 93.126 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3497_14690 1a6888ba11a1d5ebdaae14b462ffeb1d 485 SUPERFAMILY SSF75304 2 482 7.98E-166 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3497_14690 1a6888ba11a1d5ebdaae14b462ffeb1d 485 Pfam PF01425 Amidase 23 464 4.0E-156 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3497_14690 1a6888ba11a1d5ebdaae14b462ffeb1d 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 10 475 4.3E-176 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3497_14690 1a6888ba11a1d5ebdaae14b462ffeb1d 485 Gene3D G3DSA:3.90.1300.10 1 484 3.7E-203 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3497_14690 1a6888ba11a1d5ebdaae14b462ffeb1d 485 ProSitePatterns PS00571 Amidases signature. 149 180 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 C3497_01885 2c18feb189cdd4408ff9a4f6c3456f06 109 SUPERFAMILY SSF54843 1 109 1.23E-39 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 C3497_01885 2c18feb189cdd4408ff9a4f6c3456f06 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.9E-43 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01885 2c18feb189cdd4408ff9a4f6c3456f06 109 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 7.2E-34 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 C3497_01885 2c18feb189cdd4408ff9a4f6c3456f06 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.989 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01885 2c18feb189cdd4408ff9a4f6c3456f06 109 Gene3D G3DSA:3.90.470.10 1 109 1.4E-41 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 C3497_01885 2c18feb189cdd4408ff9a4f6c3456f06 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_07295 5aafa36d2b59d5178ca27237d48e7c16 261 SUPERFAMILY SSF75217 96 259 3.99E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3497_07295 5aafa36d2b59d5178ca27237d48e7c16 261 SMART SM00967 32 106 1.6E-6 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 C3497_07295 5aafa36d2b59d5178ca27237d48e7c16 261 Gene3D G3DSA:3.40.1280.10 109 261 2.1E-47 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3497_07295 5aafa36d2b59d5178ca27237d48e7c16 261 SUPERFAMILY SSF55315 2 103 2.21E-17 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like C3497_07295 5aafa36d2b59d5178ca27237d48e7c16 261 Gene3D G3DSA:3.30.1330.30 2 104 7.3E-15 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like C3497_07295 5aafa36d2b59d5178ca27237d48e7c16 261 Pfam PF00588 SpoU rRNA Methylase family 115 252 6.1E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C3497_12115 030c741d92929c5ddfa80bd757dd9c62 277 Gene3D G3DSA:3.10.20.310 65 135 6.2E-17 T 14-10-2018 C3497_12115 030c741d92929c5ddfa80bd757dd9c62 277 Pfam PF03799 Cell division protein FtsQ 139 258 2.3E-23 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB C3497_12115 030c741d92929c5ddfa80bd757dd9c62 277 Gene3D G3DSA:3.40.50.11690 137 271 2.4E-32 T 14-10-2018 C3497_12115 030c741d92929c5ddfa80bd757dd9c62 277 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 36 266 21.314 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 C3497_12115 030c741d92929c5ddfa80bd757dd9c62 277 Pfam PF08478 POTRA domain, FtsQ-type 66 135 4.4E-15 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type C3497_11065 46d0a5b830875071894a848e3f17d98b 206 SUPERFAMILY SSF53955 46 191 3.09E-15 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_00050 c30da2c906078f0d5a68148d6f5de75f 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 7 131 1.8E-51 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 C3497_00050 c30da2c906078f0d5a68148d6f5de75f 139 PIRSF PIRSF003230 1 139 2.2E-47 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 C3497_00050 c30da2c906078f0d5a68148d6f5de75f 139 Gene3D G3DSA:3.10.129.10 1 137 2.9E-45 T 14-10-2018 C3497_00050 c30da2c906078f0d5a68148d6f5de75f 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 10 126 3.2E-37 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 C3497_00050 c30da2c906078f0d5a68148d6f5de75f 139 SUPERFAMILY SSF54637 3 134 1.31E-44 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_00050 c30da2c906078f0d5a68148d6f5de75f 139 Pfam PF03061 Thioesterase superfamily 22 104 1.8E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3497_07070 7f8b1038c5634fe714166ffe2e42fdfc 85 Gene3D G3DSA:1.10.150.250 2 78 2.7E-25 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily C3497_07070 7f8b1038c5634fe714166ffe2e42fdfc 85 Pfam PF03937 Flavinator of succinate dehydrogenase 5 75 1.4E-20 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase C3497_07070 7f8b1038c5634fe714166ffe2e42fdfc 85 SUPERFAMILY SSF109910 3 77 1.11E-20 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily C3497_00735 40b1d11e18028328934a96da365f1597 293 SUPERFAMILY SSF53850 96 290 1.36E-24 T 14-10-2018 C3497_00735 40b1d11e18028328934a96da365f1597 293 Gene3D G3DSA:1.10.10.10 1 86 5.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_00735 40b1d11e18028328934a96da365f1597 293 Gene3D G3DSA:3.40.190.290 96 292 2.4E-18 T 14-10-2018 C3497_00735 40b1d11e18028328934a96da365f1597 293 SUPERFAMILY SSF46785 3 87 1.42E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_00735 40b1d11e18028328934a96da365f1597 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.4E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_00735 40b1d11e18028328934a96da365f1597 293 Pfam PF03466 LysR substrate binding domain 96 290 3.9E-23 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_00735 40b1d11e18028328934a96da365f1597 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_00735 40b1d11e18028328934a96da365f1597 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_00735 40b1d11e18028328934a96da365f1597 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_03200 fd49547aabeb42f7458b1da611cdf8b2 151 Pfam PF00293 NUDIX domain 7 120 5.3E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3497_03200 fd49547aabeb42f7458b1da611cdf8b2 151 Gene3D G3DSA:3.90.79.10 2 151 2.3E-38 T 14-10-2018 C3497_03200 fd49547aabeb42f7458b1da611cdf8b2 151 SUPERFAMILY SSF55811 4 142 5.28E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3497_03375 1ce14089bf31b91d57775c8450f4e8ee 84 Pfam PF13937 Domain of unknown function (DUF4212) 6 82 3.5E-32 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted C3497_03375 1ce14089bf31b91d57775c8450f4e8ee 84 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 7 83 7.3E-33 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted C3497_10210 5453d5bb375378629c31439de53fce3e 312 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 25 311 4.3E-110 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 C3497_10210 5453d5bb375378629c31439de53fce3e 312 SUPERFAMILY SSF56349 122 310 1.0E-55 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3497_10210 5453d5bb375378629c31439de53fce3e 312 Gene3D G3DSA:1.10.443.10 124 306 4.0E-69 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3497_10210 5453d5bb375378629c31439de53fce3e 312 Pfam PF00589 Phage integrase family 126 297 1.6E-51 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3497_10210 5453d5bb375378629c31439de53fce3e 312 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 19 312 57.599 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 C3497_10210 5453d5bb375378629c31439de53fce3e 312 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 23 104 2.1E-14 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 C3497_10210 5453d5bb375378629c31439de53fce3e 312 SUPERFAMILY SSF47823 21 114 2.75E-26 T 14-10-2018 C3497_10210 5453d5bb375378629c31439de53fce3e 312 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 21 312 53.652 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD C3497_10210 5453d5bb375378629c31439de53fce3e 312 Gene3D G3DSA:1.10.150.130 19 113 7.9E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3497_00990 56a72b7ba0d03c01cf137bc8338b4371 431 Gene3D G3DSA:3.50.50.60 97 406 1.9E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_00990 56a72b7ba0d03c01cf137bc8338b4371 431 SUPERFAMILY SSF51971 1 410 2.47E-41 T 14-10-2018 C3497_00990 56a72b7ba0d03c01cf137bc8338b4371 431 Pfam PF01266 FAD dependent oxidoreductase 2 405 5.1E-61 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 C3497_00990 56a72b7ba0d03c01cf137bc8338b4371 431 Gene3D G3DSA:3.50.50.60 2 51 1.7E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_00990 56a72b7ba0d03c01cf137bc8338b4371 431 Gene3D G3DSA:3.30.9.10 134 366 1.9E-39 T 14-10-2018 C3497_00990 56a72b7ba0d03c01cf137bc8338b4371 431 SUPERFAMILY SSF54373 277 367 2.35E-11 T 14-10-2018 C3497_07995 fc66d59d785d5cdd4272d11a6db31fcd 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 5 353 1.1E-121 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 C3497_07995 fc66d59d785d5cdd4272d11a6db31fcd 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 2.9E-77 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 C3497_08210 df59d3f14006c45d4e84f805fee7d3c8 133 Pfam PF01850 PIN domain 6 124 3.7E-14 T 14-10-2018 IPR002716 PIN domain C3497_08210 df59d3f14006c45d4e84f805fee7d3c8 133 Gene3D G3DSA:3.40.50.1010 2 128 4.6E-8 T 14-10-2018 C3497_08210 df59d3f14006c45d4e84f805fee7d3c8 133 SUPERFAMILY SSF88723 2 124 9.81E-18 T 14-10-2018 IPR029060 PIN-like domain superfamily C3497_14750 afb272391a1dd9bfc41a630d1f860484 156 ProSitePatterns PS00818 Dps protein family signature 1. 37 53 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 C3497_14750 afb272391a1dd9bfc41a630d1f860484 156 ProSitePatterns PS00819 Dps protein family signature 2. 63 77 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 C3497_14750 afb272391a1dd9bfc41a630d1f860484 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 4.7E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps C3497_14750 afb272391a1dd9bfc41a630d1f860484 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 132 150 4.7E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps C3497_14750 afb272391a1dd9bfc41a630d1f860484 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 4.7E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps C3497_14750 afb272391a1dd9bfc41a630d1f860484 156 Pfam PF00210 Ferritin-like domain 17 155 2.4E-29 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 C3497_14750 afb272391a1dd9bfc41a630d1f860484 156 Gene3D G3DSA:1.20.1260.10 1 156 2.9E-58 T 14-10-2018 IPR012347 Ferritin-like C3497_14750 afb272391a1dd9bfc41a630d1f860484 156 PIRSF PIRSF005900 2 156 3.6E-46 T 14-10-2018 IPR002177 DNA-binding protein Dps C3497_14750 afb272391a1dd9bfc41a630d1f860484 156 SUPERFAMILY SSF47240 5 155 2.67E-48 T 14-10-2018 IPR009078 Ferritin-like superfamily C3497_02175 c30ee9e908df34081261ed612799c102 550 Pfam PF10460 Peptidase M30 190 550 7.0E-122 T 14-10-2018 IPR019501 Peptidase M30, hyicolysin C3497_11465 12837e15fb8ea368fafc0f994858cc3d 282 PRINTS PR01805 VacJ lipoprotein signature 102 119 3.2E-25 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C3497_11465 12837e15fb8ea368fafc0f994858cc3d 282 PRINTS PR01805 VacJ lipoprotein signature 34 47 3.2E-25 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C3497_11465 12837e15fb8ea368fafc0f994858cc3d 282 PRINTS PR01805 VacJ lipoprotein signature 138 155 3.2E-25 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C3497_11465 12837e15fb8ea368fafc0f994858cc3d 282 PRINTS PR01805 VacJ lipoprotein signature 51 67 3.2E-25 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C3497_11465 12837e15fb8ea368fafc0f994858cc3d 282 Pfam PF04333 MlaA lipoprotein 33 225 3.6E-75 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C3497_11845 38f86d673b8031fb78aa862c3ac87762 685 Gene3D G3DSA:1.10.1370.40 13 679 9.3E-252 T 14-10-2018 C3497_11845 38f86d673b8031fb78aa862c3ac87762 685 SUPERFAMILY SSF55486 1 681 2.81E-195 T 14-10-2018 C3497_11845 38f86d673b8031fb78aa862c3ac87762 685 Pfam PF01432 Peptidase family M3 222 681 2.3E-134 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 C3497_11845 38f86d673b8031fb78aa862c3ac87762 685 Gene3D G3DSA:1.10.1370.10 140 609 9.3E-252 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 C3497_05810 8031d014d2cfe509f961c08ea76dcccd 181 SUPERFAMILY SSF53335 4 167 3.73E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_05810 8031d014d2cfe509f961c08ea76dcccd 181 Pfam PF13489 Methyltransferase domain 9 117 3.3E-9 T 14-10-2018 C3497_05810 8031d014d2cfe509f961c08ea76dcccd 181 Gene3D G3DSA:3.40.50.150 4 165 1.1E-23 T 14-10-2018 C3497_02230 869ca91657a7da30b8e057a1d309855f 128 Gene3D G3DSA:3.40.50.12740 5 127 4.7E-39 T 14-10-2018 C3497_02230 869ca91657a7da30b8e057a1d309855f 128 Pfam PF00072 Response regulator receiver domain 8 119 1.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_02230 869ca91657a7da30b8e057a1d309855f 128 SUPERFAMILY SSF52172 2 123 1.99E-36 T 14-10-2018 IPR011006 CheY-like superfamily C3497_02230 869ca91657a7da30b8e057a1d309855f 128 SMART SM00448 6 119 2.9E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_04890 9026d686f3646136d2b1c927717d6513 416 Gene3D G3DSA:3.40.50.1100 12 314 4.5E-107 T 14-10-2018 C3497_04890 9026d686f3646136d2b1c927717d6513 416 SUPERFAMILY SSF53686 8 358 1.1E-89 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3497_04890 9026d686f3646136d2b1c927717d6513 416 Gene3D G3DSA:3.40.50.1100 54 150 4.5E-107 T 14-10-2018 C3497_04890 9026d686f3646136d2b1c927717d6513 416 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 32 404 8.3E-126 T 14-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C3497_04890 9026d686f3646136d2b1c927717d6513 416 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 46 59 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 C3497_04890 9026d686f3646136d2b1c927717d6513 416 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 309 1.9E-78 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3497_00825 8177a71329252760492793e05c3c5528 163 Pfam PF01883 Iron-sulfur cluster assembly protein 5 73 2.9E-13 T 14-10-2018 IPR002744 MIP18 family-like C3497_00825 8177a71329252760492793e05c3c5528 163 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 14 163 8.9E-62 T 14-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit C3497_00825 8177a71329252760492793e05c3c5528 163 Gene3D G3DSA:3.30.300.130 2 98 1.5E-24 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C3497_00825 8177a71329252760492793e05c3c5528 163 SUPERFAMILY SSF117916 1 97 3.17E-24 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 254 6.9E-28 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 SUPERFAMILY SSF53738 10 145 8.24E-38 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 12 141 2.4E-33 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 Gene3D G3DSA:3.40.120.10 5 153 2.3E-52 T 14-10-2018 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 SUPERFAMILY SSF53738 259 355 2.39E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 366 2.5E-19 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 SUPERFAMILY SSF55957 367 461 1.02E-21 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 452 6.9E-11 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 Gene3D G3DSA:3.40.120.10 251 368 1.4E-40 T 14-10-2018 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 Gene3D G3DSA:3.40.120.10 173 250 1.6E-35 T 14-10-2018 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 205 218 8.6E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 8.6E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 8.6E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 171 190 8.6E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 SUPERFAMILY SSF53738 156 256 5.89E-33 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3497_03170 878e7fee0fcdde1199f68a590c889d8a 462 Gene3D G3DSA:3.30.310.50 369 462 1.9E-25 T 14-10-2018 C3497_09200 b0f3ebf45eb2e7d355eeee3e3ed002e3 484 Gene3D G3DSA:2.40.160.10 92 439 2.9E-5 T 14-10-2018 IPR023614 Porin domain superfamily C3497_09200 b0f3ebf45eb2e7d355eeee3e3ed002e3 484 SUPERFAMILY SSF56935 127 437 1.31E-9 T 14-10-2018 C3497_03905 ff4a6589ecdf502617494b51bb5fb334 481 Pfam PF00483 Nucleotidyl transferase 5 297 1.5E-55 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C3497_03905 ff4a6589ecdf502617494b51bb5fb334 481 SUPERFAMILY SSF51182 189 480 4.56E-81 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C3497_03905 ff4a6589ecdf502617494b51bb5fb334 481 Gene3D G3DSA:3.90.550.10 1 358 7.0E-106 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_03905 ff4a6589ecdf502617494b51bb5fb334 481 Gene3D G3DSA:2.60.120.10 359 465 3.1E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_03905 ff4a6589ecdf502617494b51bb5fb334 481 Pfam PF01050 Mannose-6-phosphate isomerase 326 476 1.7E-72 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 C3497_03905 ff4a6589ecdf502617494b51bb5fb334 481 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 480 1.6E-198 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 C3497_03905 ff4a6589ecdf502617494b51bb5fb334 481 SUPERFAMILY SSF53448 1 291 4.77E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_12400 b6213df2751d466716f5268e64423a4c 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 6.3E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_12400 b6213df2751d466716f5268e64423a4c 464 SMART SM00345 18 77 6.3E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3497_12400 b6213df2751d466716f5268e64423a4c 464 Gene3D G3DSA:3.40.640.10 147 363 2.8E-82 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_12400 b6213df2751d466716f5268e64423a4c 464 Gene3D G3DSA:3.90.1150.10 108 457 2.8E-82 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_12400 b6213df2751d466716f5268e64423a4c 464 SUPERFAMILY SSF46785 9 81 4.3E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_12400 b6213df2751d466716f5268e64423a4c 464 Pfam PF00155 Aminotransferase class I and II 146 460 3.3E-30 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_12400 b6213df2751d466716f5268e64423a4c 464 Gene3D G3DSA:1.10.10.10 11 107 9.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_12400 b6213df2751d466716f5268e64423a4c 464 SUPERFAMILY SSF53383 105 460 4.44E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_01245 4735cff68e8cc0f8ba905dfdcc8a861e 121 SUPERFAMILY SSF52172 1 121 1.35E-33 T 14-10-2018 IPR011006 CheY-like superfamily C3497_01245 4735cff68e8cc0f8ba905dfdcc8a861e 121 SMART SM00448 2 116 5.9E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01245 4735cff68e8cc0f8ba905dfdcc8a861e 121 Pfam PF00072 Response regulator receiver domain 4 116 1.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_01245 4735cff68e8cc0f8ba905dfdcc8a861e 121 Gene3D G3DSA:3.40.50.2300 1 121 3.1E-34 T 14-10-2018 C3497_05370 05bf05970f98296370e5311bd0fa320e 728 Pfam PF12801 4Fe-4S binding domain 602 629 1.4E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_05370 05bf05970f98296370e5311bd0fa320e 728 Pfam PF12801 4Fe-4S binding domain 494 537 1.1E-14 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_05370 05bf05970f98296370e5311bd0fa320e 728 SMART SM00900 95 189 3.8E-10 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 C3497_05370 05bf05970f98296370e5311bd0fa320e 728 PIRSF PIRSF036354 2 725 2.1E-167 T 14-10-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 C3497_05370 05bf05970f98296370e5311bd0fa320e 728 SUPERFAMILY SSF54862 506 678 7.12E-9 T 14-10-2018 C3497_11435 30c2f1ab09e45fab0f8a2ca93e08493f 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.476 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_11435 30c2f1ab09e45fab0f8a2ca93e08493f 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.2E-173 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3497_11435 30c2f1ab09e45fab0f8a2ca93e08493f 418 SUPERFAMILY SSF55205 1 417 1.06E-134 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 C3497_11435 30c2f1ab09e45fab0f8a2ca93e08493f 418 Gene3D G3DSA:3.65.10.10 6 414 1.3E-163 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C3497_11435 30c2f1ab09e45fab0f8a2ca93e08493f 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 9.2E-108 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 C3497_11435 30c2f1ab09e45fab0f8a2ca93e08493f 418 Gene3D G3DSA:3.65.10.10 21 230 1.3E-163 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C3497_13320 d166677aff0fdb9f61142c68c11c4cb5 219 Pfam PF02527 rRNA small subunit methyltransferase G 29 206 5.4E-49 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C3497_13320 d166677aff0fdb9f61142c68c11c4cb5 219 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 19 208 25.61 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C3497_13320 d166677aff0fdb9f61142c68c11c4cb5 219 PIRSF PIRSF003078 7 213 3.5E-52 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C3497_13320 d166677aff0fdb9f61142c68c11c4cb5 219 SUPERFAMILY SSF53335 10 211 1.34E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_13320 d166677aff0fdb9f61142c68c11c4cb5 219 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 31 210 1.3E-48 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C3497_13320 d166677aff0fdb9f61142c68c11c4cb5 219 Gene3D G3DSA:3.40.50.150 4 217 1.5E-65 T 14-10-2018 C3497_02800 4bb4e13a21eafe1b77a9ed77ae1f473b 382 SUPERFAMILY SSF50998 30 372 2.35E-69 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C3497_02800 4bb4e13a21eafe1b77a9ed77ae1f473b 382 Pfam PF13360 PQQ-like domain 78 307 1.1E-53 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C3497_02800 4bb4e13a21eafe1b77a9ed77ae1f473b 382 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 10 378 1.9E-122 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB C3497_02800 4bb4e13a21eafe1b77a9ed77ae1f473b 382 Gene3D G3DSA:2.130.10.10 27 382 4.0E-82 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C3497_02800 4bb4e13a21eafe1b77a9ed77ae1f473b 382 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 4 380 34.847 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB C3497_02800 4bb4e13a21eafe1b77a9ed77ae1f473b 382 SMART SM00564 65 134 32.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_02800 4bb4e13a21eafe1b77a9ed77ae1f473b 382 SMART SM00564 318 349 32.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_02800 4bb4e13a21eafe1b77a9ed77ae1f473b 382 SMART SM00564 143 174 19.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_02800 4bb4e13a21eafe1b77a9ed77ae1f473b 382 SMART SM00564 277 308 120.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_02800 4bb4e13a21eafe1b77a9ed77ae1f473b 382 SMART SM00564 188 219 9.6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3497_03345 90ec68e3817daa64ee6d3b0b66a8c9c9 102 Gene3D G3DSA:1.10.760.10 28 102 2.3E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_03345 90ec68e3817daa64ee6d3b0b66a8c9c9 102 SUPERFAMILY SSF46626 31 101 1.92E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_11160 8d62e9cd8841408533ee5afd6c53eebb 136 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 14 129 6.1E-44 T 14-10-2018 IPR021877 Protein of unknown function DUF3487 C3497_11160 8d62e9cd8841408533ee5afd6c53eebb 136 Pfam PF11990 Protein of unknown function (DUF3487) 13 130 2.2E-43 T 14-10-2018 IPR021877 Protein of unknown function DUF3487 C3497_12825 761a4d64408967a0cd5faa019f7046f0 369 Pfam PF13439 Glycosyltransferase Family 4 15 173 1.8E-10 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_12825 761a4d64408967a0cd5faa019f7046f0 369 Gene3D G3DSA:3.40.50.2000 16 172 9.8E-43 T 14-10-2018 C3497_12825 761a4d64408967a0cd5faa019f7046f0 369 Pfam PF00534 Glycosyl transferases group 1 191 339 1.5E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3497_12825 761a4d64408967a0cd5faa019f7046f0 369 Gene3D G3DSA:3.40.50.2000 173 338 9.8E-43 T 14-10-2018 C3497_12825 761a4d64408967a0cd5faa019f7046f0 369 SUPERFAMILY SSF53756 9 363 4.35E-57 T 14-10-2018 C3497_00710 a3caf97da682020af67e6d6c560e4d04 97 SUPERFAMILY SSF46785 2 94 1.18E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_00710 a3caf97da682020af67e6d6c560e4d04 97 Pfam PF12840 Helix-turn-helix domain 4 75 3.4E-17 T 14-10-2018 C3497_00710 a3caf97da682020af67e6d6c560e4d04 97 SMART SM00418 5 95 3.2E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_00710 a3caf97da682020af67e6d6c560e4d04 97 Gene3D G3DSA:1.10.10.10 1 96 1.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_06080 02e5cb00b43c5c915fcd1ebcdc98f402 101 Pfam PF16290 Domain of unknown function (DUF4936) 11 98 6.9E-26 T 14-10-2018 IPR032556 Protein of unknown function DUF4936 C3497_05920 c579765572c280b5b089bd798a749c87 181 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 1.4E-83 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 C3497_05920 c579765572c280b5b089bd798a749c87 181 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 165 4.0E-61 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 C3497_05920 c579765572c280b5b089bd798a749c87 181 SUPERFAMILY SSF160930 5 160 6.02E-62 T 14-10-2018 C3497_05920 c579765572c280b5b089bd798a749c87 181 PIRSF PIRSF003159 1 181 1.4E-92 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 C3497_05920 c579765572c280b5b089bd798a749c87 181 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 178 45.056 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 C3497_12695 2f4426b5ee45aa17455c55cb8256fb52 307 Gene3D G3DSA:3.40.710.10 24 301 4.5E-62 T 14-10-2018 C3497_12695 2f4426b5ee45aa17455c55cb8256fb52 307 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 7.7E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3497_12695 2f4426b5ee45aa17455c55cb8256fb52 307 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 7.7E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3497_12695 2f4426b5ee45aa17455c55cb8256fb52 307 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 81 92 7.7E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3497_12695 2f4426b5ee45aa17455c55cb8256fb52 307 SUPERFAMILY SSF56601 10 290 4.56E-57 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3497_12695 2f4426b5ee45aa17455c55cb8256fb52 307 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 52 274 1.4E-54 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 C3497_13400 16856107fbd96042255f189ca070bf89 387 Pfam PF04773 FecR protein 171 262 7.8E-21 T 14-10-2018 IPR006860 FecR protein C3497_13400 16856107fbd96042255f189ca070bf89 387 Pfam PF16220 Domain of unknown function (DUF4880) 54 95 1.5E-6 T 14-10-2018 IPR032623 FecR, N-terminal C3497_13400 16856107fbd96042255f189ca070bf89 387 Gene3D G3DSA:2.60.120.1440 158 283 1.9E-23 T 14-10-2018 C3497_09020 1a36202bd2d8597f7ebe5eb950bf35c1 117 SUPERFAMILY SSF52172 1 115 6.55E-37 T 14-10-2018 IPR011006 CheY-like superfamily C3497_09020 1a36202bd2d8597f7ebe5eb950bf35c1 117 Pfam PF00072 Response regulator receiver domain 4 113 3.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_09020 1a36202bd2d8597f7ebe5eb950bf35c1 117 Gene3D G3DSA:3.40.50.12740 1 117 9.5E-43 T 14-10-2018 C3497_09020 1a36202bd2d8597f7ebe5eb950bf35c1 117 SMART SM00448 2 115 2.2E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_03580 dec9e673eed0e4468826ca359139747f 327 SUPERFAMILY SSF51735 1 176 1.15E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_03580 dec9e673eed0e4468826ca359139747f 327 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 184 205 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 54 81 3.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 194 218 3.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 3.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 169 193 3.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 234 251 3.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 129 149 3.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 SUPERFAMILY SSF48179 175 327 4.42E-55 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3497_03580 dec9e673eed0e4468826ca359139747f 327 PIRSF PIRSF000114 1 327 8.4E-98 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 176 316 1.6E-51 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 Gene3D G3DSA:1.10.1040.10 185 327 1.0E-50 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C3497_03580 dec9e673eed0e4468826ca359139747f 327 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 318 37.634 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 155 2.4E-45 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3497_03580 dec9e673eed0e4468826ca359139747f 327 Gene3D G3DSA:3.40.50.720 1 183 1.0E-54 T 14-10-2018 C3497_09615 253946f453064415d31843feb855d89d 127 SUPERFAMILY SSF109709 42 103 1.44E-8 T 14-10-2018 C3497_09615 253946f453064415d31843feb855d89d 127 Gene3D G3DSA:1.10.10.2830 40 123 5.2E-6 T 14-10-2018 C3497_06875 34ed0469a393d929558c1005d9ffd7a7 403 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 2 403 1.7E-228 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 C3497_06875 34ed0469a393d929558c1005d9ffd7a7 403 Gene3D G3DSA:3.90.1150.10 6 374 1.0E-165 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_06875 34ed0469a393d929558c1005d9ffd7a7 403 Gene3D G3DSA:3.40.640.10 17 261 1.0E-165 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_06875 34ed0469a393d929558c1005d9ffd7a7 403 Pfam PF00266 Aminotransferase class-V 6 367 6.1E-90 T 14-10-2018 IPR000192 Aminotransferase class V domain C3497_06875 34ed0469a393d929558c1005d9ffd7a7 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site C3497_06875 34ed0469a393d929558c1005d9ffd7a7 403 PIRSF PIRSF005572 3 383 1.0E-137 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 C3497_06875 34ed0469a393d929558c1005d9ffd7a7 403 SUPERFAMILY SSF53383 5 390 2.5E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_06875 34ed0469a393d929558c1005d9ffd7a7 403 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 2 394 54.901 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 C3497_00975 be0ee2bf7c315d4312bb98c49ff521c3 134 Gene3D G3DSA:2.40.10.220 1 127 2.6E-5 T 14-10-2018 C3497_00975 be0ee2bf7c315d4312bb98c49ff521c3 134 SUPERFAMILY SSF141371 4 111 5.89E-5 T 14-10-2018 C3497_11400 e738edf4ad1cf00f2742c81f6bc24e46 212 Pfam PF00117 Glutamine amidotransferase class-I 6 207 1.3E-17 T 14-10-2018 IPR017926 Glutamine amidotransferase C3497_11400 e738edf4ad1cf00f2742c81f6bc24e46 212 SUPERFAMILY SSF52317 2 210 5.77E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_11400 e738edf4ad1cf00f2742c81f6bc24e46 212 Gene3D G3DSA:3.40.50.880 1 211 3.9E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3497_11400 e738edf4ad1cf00f2742c81f6bc24e46 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 210 1.1E-64 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 C3497_11400 e738edf4ad1cf00f2742c81f6bc24e46 212 PIRSF PIRSF000495 2 212 2.3E-68 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 C3497_11400 e738edf4ad1cf00f2742c81f6bc24e46 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 210 36.312 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 C3497_09515 3267d09a35fcfc37da038f375e131e78 267 SUPERFAMILY SSF53098 3 226 1.08E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_09515 3267d09a35fcfc37da038f375e131e78 267 Gene3D G3DSA:3.30.420.10 29 218 6.1E-20 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_09515 3267d09a35fcfc37da038f375e131e78 267 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 260 2.7E-91 T 14-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like C3497_14645 ffbd387b7ac64d6bc659bb3b8063ccc4 285 Gene3D G3DSA:3.20.10.10 120 283 6.4E-54 T 14-10-2018 C3497_14645 ffbd387b7ac64d6bc659bb3b8063ccc4 285 Gene3D G3DSA:3.30.470.10 1 119 7.5E-37 T 14-10-2018 C3497_14645 ffbd387b7ac64d6bc659bb3b8063ccc4 285 Pfam PF01063 Amino-transferase class IV 30 251 5.8E-48 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 C3497_14645 ffbd387b7ac64d6bc659bb3b8063ccc4 285 SUPERFAMILY SSF56752 3 277 8.63E-78 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 C3497_04375 20364042c2177971f3561d0e55b0ce98 277 ProSitePatterns PS00171 Triosephosphate isomerase active site. 189 199 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_04375 20364042c2177971f3561d0e55b0ce98 277 Gene3D G3DSA:3.20.20.70 14 276 5.1E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_04375 20364042c2177971f3561d0e55b0ce98 277 Pfam PF00121 Triosephosphate isomerase 30 269 1.0E-81 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_04375 20364042c2177971f3561d0e55b0ce98 277 SUPERFAMILY SSF51351 30 273 1.07E-83 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_04375 20364042c2177971f3561d0e55b0ce98 277 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 31 262 2.7E-59 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_04375 20364042c2177971f3561d0e55b0ce98 277 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 28 271 55.315 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3497_05450 ab0930e9fa92d7366e9f3b3a9f8314cb 337 Pfam PF02504 Fatty acid synthesis protein 3 323 1.6E-109 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 C3497_05450 ab0930e9fa92d7366e9f3b3a9f8314cb 337 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 337 151.732 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 C3497_05450 ab0930e9fa92d7366e9f3b3a9f8314cb 337 SUPERFAMILY SSF53659 3 331 4.93E-104 T 14-10-2018 C3497_05450 ab0930e9fa92d7366e9f3b3a9f8314cb 337 PIRSF PIRSF002465 1 336 5.9E-130 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 C3497_05450 ab0930e9fa92d7366e9f3b3a9f8314cb 337 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 330 4.5E-113 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 C3497_05450 ab0930e9fa92d7366e9f3b3a9f8314cb 337 Gene3D G3DSA:3.40.718.10 2 337 7.6E-129 T 14-10-2018 C3497_00080 c12ae6494424a0f9abfd6a3f2e3a41dd 769 Gene3D G3DSA:3.40.50.300 515 768 2.3E-97 T 14-10-2018 C3497_00080 c12ae6494424a0f9abfd6a3f2e3a41dd 769 Gene3D G3DSA:1.20.1560.10 169 508 1.7E-87 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3497_00080 c12ae6494424a0f9abfd6a3f2e3a41dd 769 Pfam PF00005 ABC transporter 538 686 5.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_00080 c12ae6494424a0f9abfd6a3f2e3a41dd 769 Pfam PF00664 ABC transporter transmembrane region 200 472 1.6E-43 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C3497_00080 c12ae6494424a0f9abfd6a3f2e3a41dd 769 SUPERFAMILY SSF90123 187 508 3.4E-78 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3497_00080 c12ae6494424a0f9abfd6a3f2e3a41dd 769 SMART SM00382 546 732 1.9E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00080 c12ae6494424a0f9abfd6a3f2e3a41dd 769 ProSitePatterns PS00211 ABC transporters family signature. 658 672 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_00080 c12ae6494424a0f9abfd6a3f2e3a41dd 769 SUPERFAMILY SSF52540 512 756 4.51E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12375 9ca116e5aec1a1335016b18e9bb94acd 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 222 8.7E-33 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C3497_12375 9ca116e5aec1a1335016b18e9bb94acd 324 Gene3D G3DSA:3.40.50.720 1 321 4.4E-67 T 14-10-2018 C3497_12375 9ca116e5aec1a1335016b18e9bb94acd 324 SUPERFAMILY SSF51735 1 317 1.82E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_00655 d668fd1509cee1225455dfa2bc688790 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 14-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site C3497_00655 d668fd1509cee1225455dfa2bc688790 113 Gene3D G3DSA:2.20.28.10 69 102 3.2E-30 T 14-10-2018 C3497_00655 d668fd1509cee1225455dfa2bc688790 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 1.6E-31 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 C3497_00655 d668fd1509cee1225455dfa2bc688790 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.7E-30 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 C3497_00655 d668fd1509cee1225455dfa2bc688790 113 PIRSF PIRSF004761 1 113 8.0E-35 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 C3497_00655 d668fd1509cee1225455dfa2bc688790 113 Gene3D G3DSA:3.30.2320.50 2 109 3.2E-30 T 14-10-2018 C3497_00655 d668fd1509cee1225455dfa2bc688790 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 21.168 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 C3497_05240 647f7a3bde748d2dbf991e728c2c89ce 653 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 39 94 7.3E-10 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 C3497_05240 647f7a3bde748d2dbf991e728c2c89ce 653 Gene3D G3DSA:3.40.50.12780 73 523 2.9E-59 T 14-10-2018 C3497_05240 647f7a3bde748d2dbf991e728c2c89ce 653 Pfam PF00501 AMP-binding enzyme 102 527 1.7E-51 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3497_05240 647f7a3bde748d2dbf991e728c2c89ce 653 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 615 9.9E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3497_05240 647f7a3bde748d2dbf991e728c2c89ce 653 ProSitePatterns PS00455 Putative AMP-binding domain signature. 271 282 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3497_05240 647f7a3bde748d2dbf991e728c2c89ce 653 SUPERFAMILY SSF56801 27 642 2.88E-129 T 14-10-2018 C3497_05240 647f7a3bde748d2dbf991e728c2c89ce 653 Gene3D G3DSA:3.30.300.30 527 651 2.9E-14 T 14-10-2018 C3497_05240 647f7a3bde748d2dbf991e728c2c89ce 653 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 4 651 4.0E-299 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 C3497_08985 b29159902b63d73790419de18ebcdb11 290 SMART SM00887 26 272 1.1E-78 T 14-10-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 C3497_08985 b29159902b63d73790419de18ebcdb11 290 Pfam PF09459 Ethylbenzene dehydrogenase 27 272 2.0E-47 T 14-10-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 C3497_08985 b29159902b63d73790419de18ebcdb11 290 Gene3D G3DSA:2.60.40.1190 61 273 2.2E-10 T 14-10-2018 C3497_13335 015363b3509d21e78c205d83e6019f02 275 SUPERFAMILY SSF46689 171 220 3.76E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_13335 015363b3509d21e78c205d83e6019f02 275 SUPERFAMILY SSF46689 223 273 9.68E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_13335 015363b3509d21e78c205d83e6019f02 275 Gene3D G3DSA:1.10.10.60 172 274 3.3E-28 T 14-10-2018 C3497_13335 015363b3509d21e78c205d83e6019f02 275 Pfam PF12833 Helix-turn-helix domain 193 271 7.5E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3497_13335 015363b3509d21e78c205d83e6019f02 275 SUPERFAMILY SSF51215 18 139 2.22E-17 T 14-10-2018 IPR037923 Transcription regulator HTH-like C3497_13335 015363b3509d21e78c205d83e6019f02 275 Pfam PF02311 AraC-like ligand binding domain 25 152 1.1E-22 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 C3497_13335 015363b3509d21e78c205d83e6019f02 275 SMART SM00342 187 269 1.1E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3497_10470 d49f98dcae85710c7c63cd9c22334142 383 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 34 372 8.8E-99 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 C3497_10470 d49f98dcae85710c7c63cd9c22334142 383 SUPERFAMILY SSF53756 11 378 2.92E-107 T 14-10-2018 C3497_10470 d49f98dcae85710c7c63cd9c22334142 383 Gene3D G3DSA:3.40.50.2000 205 353 7.5E-50 T 14-10-2018 C3497_10470 d49f98dcae85710c7c63cd9c22334142 383 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 11 371 1.0E-88 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 C3497_10470 d49f98dcae85710c7c63cd9c22334142 383 Gene3D G3DSA:3.40.50.2000 3 204 6.5E-71 T 14-10-2018 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 279 51.975 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 165 189 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 PIRSF PIRSF000166 2 304 1.4E-122 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 SUPERFAMILY SSF102886 5 304 4.58E-131 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 Pfam PF01218 Coproporphyrinogen III oxidase 8 304 8.2E-128 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 PRINTS PR00073 Coprogen oxidase signature 123 145 1.6E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 PRINTS PR00073 Coprogen oxidase signature 46 67 1.6E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 PRINTS PR00073 Coprogen oxidase signature 236 263 1.6E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 PRINTS PR00073 Coprogen oxidase signature 88 112 1.6E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 PRINTS PR00073 Coprogen oxidase signature 29 45 1.6E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 PRINTS PR00073 Coprogen oxidase signature 161 190 1.6E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 PRINTS PR00073 Coprogen oxidase signature 264 290 1.6E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_11925 3da546764aa3c35d06ce54e4168a893b 304 Gene3D G3DSA:3.40.1500.10 1 304 4.8E-131 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3497_05265 6d9fd11c8a383f71d66f833292f3e88e 141 Pfam PF02033 Ribosome-binding factor A 7 110 2.4E-31 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C3497_05265 6d9fd11c8a383f71d66f833292f3e88e 141 SUPERFAMILY SSF89919 3 112 2.88E-34 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily C3497_05265 6d9fd11c8a383f71d66f833292f3e88e 141 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 113 3.0E-32 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C3497_05265 6d9fd11c8a383f71d66f833292f3e88e 141 Gene3D G3DSA:3.30.300.20 1 104 3.4E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3497_05265 6d9fd11c8a383f71d66f833292f3e88e 141 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 110 26.339 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C3497_05265 6d9fd11c8a383f71d66f833292f3e88e 141 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 97 9.0E-40 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C3497_14575 e283588b4993e2adf5adc061ccd8b4b4 387 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 75 316 1.8E-49 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 C3497_14575 e283588b4993e2adf5adc061ccd8b4b4 387 SUPERFAMILY SSF53335 22 378 3.24E-95 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_14575 e283588b4993e2adf5adc061ccd8b4b4 387 Gene3D G3DSA:3.40.50.12710 3 387 3.5E-128 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 C3497_13060 4d712a1a6ca887ba46d5704550b9e10f 66 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 11 55 4.9E-12 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 C3497_13060 4d712a1a6ca887ba46d5704550b9e10f 66 Pfam PF04995 Heme exporter protein D (CcmD) 17 51 6.9E-9 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 C3497_00555 7c5b331da944103ce903b6f87d4f41d8 166 SUPERFAMILY SSF50475 14 164 6.87E-47 T 14-10-2018 C3497_00555 7c5b331da944103ce903b6f87d4f41d8 166 Pfam PF01613 Flavin reductase like domain 22 164 1.6E-32 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 C3497_00555 7c5b331da944103ce903b6f87d4f41d8 166 SMART SM00903 20 163 4.3E-59 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 C3497_00555 7c5b331da944103ce903b6f87d4f41d8 166 Gene3D G3DSA:2.30.110.10 13 166 2.1E-46 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 C3497_03415 7d5525ea195ead2017878579ba54c8b9 621 SUPERFAMILY SSF55073 453 610 1.8E-50 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_03415 7d5525ea195ead2017878579ba54c8b9 621 SMART SM00267 437 609 1.5E-56 T 14-10-2018 IPR000160 GGDEF domain C3497_03415 7d5525ea195ead2017878579ba54c8b9 621 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 446 607 9.7E-55 T 14-10-2018 IPR000160 GGDEF domain C3497_03415 7d5525ea195ead2017878579ba54c8b9 621 Gene3D G3DSA:1.20.1480.50 159 258 6.4E-6 T 14-10-2018 C3497_03415 7d5525ea195ead2017878579ba54c8b9 621 Gene3D G3DSA:3.30.70.270 441 612 4.0E-58 T 14-10-2018 C3497_03415 7d5525ea195ead2017878579ba54c8b9 621 Pfam PF00990 Diguanylate cyclase, GGDEF domain 449 605 1.5E-48 T 14-10-2018 IPR000160 GGDEF domain C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 414 30.201 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 7.5E-51 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 316 413 1.1E-28 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 PIRSF PIRSF000445 1 417 5.2E-153 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 SUPERFAMILY SSF51735 159 311 2.16E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 5 412 8.6E-131 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 Gene3D G3DSA:3.40.50.720 158 309 5.2E-43 T 14-10-2018 C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 Gene3D G3DSA:3.30.460.30 2 154 1.4E-57 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 SUPERFAMILY SSF69075 314 414 1.31E-28 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 SUPERFAMILY SSF69742 1 154 7.19E-48 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3497_12040 83a2dbfb85a67378f0c9c3d7c2e7497b 417 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 302 8.7E-43 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase C3497_11280 4780870b9cc52f99ddb136ad231193fa 422 Pfam PF00589 Phage integrase family 212 358 1.3E-14 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3497_11280 4780870b9cc52f99ddb136ad231193fa 422 Gene3D G3DSA:3.30.160.390 5 91 4.5E-22 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily C3497_11280 4780870b9cc52f99ddb136ad231193fa 422 Gene3D G3DSA:1.10.443.10 209 381 2.4E-13 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3497_11280 4780870b9cc52f99ddb136ad231193fa 422 Pfam PF13356 Arm DNA-binding domain 6 89 9.4E-17 T 14-10-2018 IPR025166 Integrase, DNA-binding domain C3497_11280 4780870b9cc52f99ddb136ad231193fa 422 Gene3D G3DSA:1.10.150.130 96 207 4.5E-25 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3497_11280 4780870b9cc52f99ddb136ad231193fa 422 SUPERFAMILY SSF56349 102 382 8.24E-51 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3497_14080 4300e13cd7d583d239fb06e7591ae888 385 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 4 344 7.7E-100 T 14-10-2018 IPR010148 CRISPR-associated protein, CT1975 C3497_14080 4300e13cd7d583d239fb06e7591ae888 385 Pfam PF09344 CT1975-like protein 5 364 3.9E-120 T 14-10-2018 IPR010148 CRISPR-associated protein, CT1975 C3497_04855 8a99a8e23fdf2511941fd0d86c0d440b 363 Gene3D G3DSA:3.40.50.150 185 361 1.1E-49 T 14-10-2018 C3497_04855 8a99a8e23fdf2511941fd0d86c0d440b 363 SUPERFAMILY SSF53335 194 301 1.61E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_04855 8a99a8e23fdf2511941fd0d86c0d440b 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 11 362 71.945 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 C3497_04855 8a99a8e23fdf2511941fd0d86c0d440b 363 Gene3D G3DSA:3.30.2300.20 90 184 1.0E-27 T 14-10-2018 C3497_04855 8a99a8e23fdf2511941fd0d86c0d440b 363 Pfam PF01728 FtsJ-like methyltransferase 196 256 1.5E-5 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 C3497_04855 8a99a8e23fdf2511941fd0d86c0d440b 363 Gene3D G3DSA:3.30.70.2810 11 88 3.3E-18 T 14-10-2018 C3497_04855 8a99a8e23fdf2511941fd0d86c0d440b 363 PIRSF PIRSF028774 11 363 6.1E-124 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 C3497_14105 940b1932a89a567d19c9d93f8469d60a 98 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 1 86 2.9E-34 T 14-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype C3497_14105 940b1932a89a567d19c9d93f8469d60a 98 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 1 86 2.6E-36 T 14-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype C3497_14105 940b1932a89a567d19c9d93f8469d60a 98 Gene3D G3DSA:3.30.70.240 1 75 1.8E-31 T 14-10-2018 C3497_10420 906d78eb5cb8a15be1014ece2858dfe4 447 TIGRFAM TIGR03097 PEP_O_lig_1: probable O-glycosylation ligase, exosortase A-associated 2 406 7.1E-161 T 14-10-2018 IPR017528 Conserved hypothetical protein CHP03097, O-antigen ligase-related C3497_10420 906d78eb5cb8a15be1014ece2858dfe4 447 Pfam PF04932 O-Antigen ligase 202 337 5.3E-14 T 14-10-2018 IPR007016 O-antigen ligase-related C3497_13910 c19671e8224f2575a7cda2167dda51db 185 Gene3D G3DSA:3.40.50.2020 3 184 1.5E-46 T 14-10-2018 C3497_13910 c19671e8224f2575a7cda2167dda51db 185 Pfam PF00156 Phosphoribosyl transferase domain 19 144 9.4E-21 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3497_13910 c19671e8224f2575a7cda2167dda51db 185 SUPERFAMILY SSF53271 12 183 6.69E-40 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3497_04940 460414b7585161fcb7c265802acad1c1 431 SUPERFAMILY SSF53383 26 423 3.95E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_04940 460414b7585161fcb7c265802acad1c1 431 Gene3D G3DSA:3.40.640.10 75 316 2.2E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_04940 460414b7585161fcb7c265802acad1c1 431 Gene3D G3DSA:3.90.1150.10 43 420 2.2E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_04940 460414b7585161fcb7c265802acad1c1 431 Pfam PF00155 Aminotransferase class I and II 57 416 6.4E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_08110 8e1298759f29e32c35c849453de7d5d0 457 Pfam PF13163 Protein of unknown function (DUF3999) 27 449 3.0E-108 T 14-10-2018 IPR025060 Protein of unknown function DUF3999 C3497_11170 43ed2fa43b6d24b9deef07c67b64ae7a 304 Pfam PF11920 Protein of unknown function (DUF3438) 11 284 5.2E-128 T 14-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 C3497_11170 43ed2fa43b6d24b9deef07c67b64ae7a 304 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 15 275 7.4E-115 T 14-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 C3497_07750 0d8abc063b3ed96ab288f19a6ea6d602 122 PIRSF PIRSF009151 1 122 3.4E-45 T 14-10-2018 IPR008497 Protein of unknown function DUF779 C3497_07750 0d8abc063b3ed96ab288f19a6ea6d602 122 Pfam PF05610 Protein of unknown function (DUF779) 14 107 2.6E-36 T 14-10-2018 IPR008497 Protein of unknown function DUF779 C3497_04350 649e0187be6e12573ba4a4cdb8d72bdc 128 Pfam PF12840 Helix-turn-helix domain 10 71 4.2E-15 T 14-10-2018 C3497_04350 649e0187be6e12573ba4a4cdb8d72bdc 128 SUPERFAMILY SSF46785 7 95 3.75E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_04350 649e0187be6e12573ba4a4cdb8d72bdc 128 Gene3D G3DSA:1.10.10.10 3 95 1.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_04350 649e0187be6e12573ba4a4cdb8d72bdc 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 4.2E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_04350 649e0187be6e12573ba4a4cdb8d72bdc 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 4.2E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_04350 649e0187be6e12573ba4a4cdb8d72bdc 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 4.2E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_04350 649e0187be6e12573ba4a4cdb8d72bdc 128 SMART SM00418 10 84 4.2E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3497_10205 b2da5f6f3df83ad4b7830c7211cf61e9 193 SUPERFAMILY SSF54626 22 190 2.09E-24 T 14-10-2018 IPR036298 Chalcone isomerase superfamily GO:0016872 C3497_10205 b2da5f6f3df83ad4b7830c7211cf61e9 193 Gene3D G3DSA:3.50.70.10 21 174 5.9E-15 T 14-10-2018 IPR016088 Chalcone isomerase, 3-layer sandwich KEGG: 00941+5.5.1.6|MetaCyc: PWY-2002|MetaCyc: PWY-5059|MetaCyc: PWY-6325|MetaCyc: PWY-6787|MetaCyc: PWY-7397|MetaCyc: PWY-7897 C3497_10205 b2da5f6f3df83ad4b7830c7211cf61e9 193 Pfam PF16036 Chalcone isomerase-like 22 190 2.3E-47 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 C3497_03135 f0386caf898576cf28f9b437866b470d 371 SUPERFAMILY SSF100879 252 359 1.14E-19 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3497_03135 f0386caf898576cf28f9b437866b470d 371 Gene3D G3DSA:1.10.150.20 181 241 1.2E-19 T 14-10-2018 C3497_03135 f0386caf898576cf28f9b437866b470d 371 Pfam PF11798 IMS family HHH motif 177 206 1.5E-6 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 C3497_03135 f0386caf898576cf28f9b437866b470d 371 Pfam PF00817 impB/mucB/samB family 18 165 1.5E-51 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3497_03135 f0386caf898576cf28f9b437866b470d 371 Gene3D G3DSA:3.30.70.270 80 180 1.5E-39 T 14-10-2018 C3497_03135 f0386caf898576cf28f9b437866b470d 371 Hamap MF_01113 DNA polymerase IV [dinB]. 12 359 37.288 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 C3497_03135 f0386caf898576cf28f9b437866b470d 371 Gene3D G3DSA:3.30.1490.100 248 360 3.7E-23 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3497_03135 f0386caf898576cf28f9b437866b470d 371 Gene3D G3DSA:2.30.40.20 22 79 9.3E-26 T 14-10-2018 C3497_03135 f0386caf898576cf28f9b437866b470d 371 SUPERFAMILY SSF56672 10 245 5.07E-94 T 14-10-2018 C3497_03135 f0386caf898576cf28f9b437866b470d 371 Pfam PF11799 impB/mucB/samB family C-terminal domain 244 346 3.1E-4 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3497_11380 ddcbb1f4efcae17f5d96bebcf4cb29b0 108 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 7 89 4.8E-32 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 C3497_11380 ddcbb1f4efcae17f5d96bebcf4cb29b0 108 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 8 93 1.0E-17 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 C3497_11380 ddcbb1f4efcae17f5d96bebcf4cb29b0 108 Gene3D G3DSA:1.10.287.1080 3 95 2.4E-30 T 14-10-2018 C3497_11380 ddcbb1f4efcae17f5d96bebcf4cb29b0 108 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 4 90 20.423 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 C3497_11380 ddcbb1f4efcae17f5d96bebcf4cb29b0 108 SUPERFAMILY SSF101386 6 94 2.8E-25 T 14-10-2018 C3497_12885 cea76223f4dfce5c0464793b3b0fa397 288 Pfam PF00535 Glycosyl transferase family 2 6 157 1.5E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3497_12885 cea76223f4dfce5c0464793b3b0fa397 288 Gene3D G3DSA:3.90.550.10 1 220 4.0E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_12885 cea76223f4dfce5c0464793b3b0fa397 288 SUPERFAMILY SSF53448 2 227 5.36E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_14380 5d83d024589887631b88a8b84c643a52 294 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 11 294 33.111 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 C3497_14380 5d83d024589887631b88a8b84c643a52 294 Pfam PF01564 Spermine/spermidine synthase domain 66 240 3.8E-40 T 14-10-2018 C3497_14380 5d83d024589887631b88a8b84c643a52 294 SUPERFAMILY SSF53335 14 293 4.13E-75 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_14380 5d83d024589887631b88a8b84c643a52 294 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 87 100 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 C3497_14380 5d83d024589887631b88a8b84c643a52 294 Gene3D G3DSA:3.40.50.150 64 294 8.6E-69 T 14-10-2018 C3497_14380 5d83d024589887631b88a8b84c643a52 294 Gene3D G3DSA:2.30.140.10 3 63 4.1E-7 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 C3497_11885 7e13c7170f2415ca864875b813c7c7e9 334 SMART SM00587 88 252 0.0032 T 14-10-2018 IPR015897 CHK kinase-like C3497_11885 7e13c7170f2415ca864875b813c7c7e9 334 Pfam PF01636 Phosphotransferase enzyme family 24 245 8.6E-32 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C3497_11885 7e13c7170f2415ca864875b813c7c7e9 334 Gene3D G3DSA:3.90.1200.10 93 330 2.3E-76 T 14-10-2018 C3497_11885 7e13c7170f2415ca864875b813c7c7e9 334 SUPERFAMILY SSF56112 4 327 5.23E-60 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3497_11885 7e13c7170f2415ca864875b813c7c7e9 334 Gene3D G3DSA:3.30.200.20 1 92 1.4E-22 T 14-10-2018 C3497_04785 a1831d7902ba26a2dd83880202f98721 271 Pfam PF01261 Xylose isomerase-like TIM barrel 21 218 1.9E-38 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain C3497_04785 a1831d7902ba26a2dd83880202f98721 271 PIRSF PIRSF006241 1 261 2.3E-94 T 14-10-2018 IPR026040 Hydroxypyruvate isomerase-like C3497_04785 a1831d7902ba26a2dd83880202f98721 271 Gene3D G3DSA:3.20.20.150 1 260 1.4E-82 T 14-10-2018 C3497_04785 a1831d7902ba26a2dd83880202f98721 271 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 256 3.3E-112 T 14-10-2018 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 C3497_04785 a1831d7902ba26a2dd83880202f98721 271 SUPERFAMILY SSF51658 1 257 6.22E-86 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily C3497_12610 09b58326bea591ac45736734039418ec 128 Gene3D G3DSA:3.30.70.60 1 92 6.9E-34 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 C3497_12610 09b58326bea591ac45736734039418ec 128 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.756 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3497_12610 09b58326bea591ac45736734039418ec 128 Pfam PF01250 Ribosomal protein S6 3 91 6.0E-29 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12610 09b58326bea591ac45736734039418ec 128 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.5E-35 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12610 09b58326bea591ac45736734039418ec 128 SUPERFAMILY SSF54995 1 104 9.29E-40 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_00310 9123610d4dab1232aa61d2def67174f8 298 Pfam PF04321 RmlD substrate binding domain 1 295 8.8E-107 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 C3497_00310 9123610d4dab1232aa61d2def67174f8 298 Gene3D G3DSA:3.40.50.720 3 282 1.7E-105 T 14-10-2018 C3497_00310 9123610d4dab1232aa61d2def67174f8 298 SUPERFAMILY SSF51735 1 294 2.26E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_00310 9123610d4dab1232aa61d2def67174f8 298 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 294 1.2E-100 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 C3497_00310 9123610d4dab1232aa61d2def67174f8 298 Gene3D G3DSA:3.90.25.10 158 288 1.7E-105 T 14-10-2018 C3497_12215 a49ee126ffd29495d8b71c9804ec0217 70 Gene3D G3DSA:1.20.5.1150 16 54 3.9E-19 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12215 a49ee126ffd29495d8b71c9804ec0217 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.3E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12215 a49ee126ffd29495d8b71c9804ec0217 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.3E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12215 a49ee126ffd29495d8b71c9804ec0217 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.3E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12215 a49ee126ffd29495d8b71c9804ec0217 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.3E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12215 a49ee126ffd29495d8b71c9804ec0217 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.925 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12215 a49ee126ffd29495d8b71c9804ec0217 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 56 1.0E-13 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12215 a49ee126ffd29495d8b71c9804ec0217 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_12215 a49ee126ffd29495d8b71c9804ec0217 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.1E-22 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12215 a49ee126ffd29495d8b71c9804ec0217 70 Pfam PF01165 Ribosomal protein S21 4 56 2.5E-20 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_03860 a2687b5e8dc7d127396d547bbde2916d 142 Gene3D G3DSA:3.10.50.40 14 139 2.1E-36 T 14-10-2018 C3497_03860 a2687b5e8dc7d127396d547bbde2916d 142 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 138 6.2E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C3497_03860 a2687b5e8dc7d127396d547bbde2916d 142 Gene3D G3DSA:2.40.10.330 72 127 2.1E-36 T 14-10-2018 C3497_03860 a2687b5e8dc7d127396d547bbde2916d 142 SUPERFAMILY SSF54534 5 141 1.26E-33 T 14-10-2018 C3497_05890 9d5d8f1854c8b6d59be512307dd0a9c5 523 Gene3D G3DSA:3.40.50.300 7 243 1.9E-62 T 14-10-2018 C3497_05890 9d5d8f1854c8b6d59be512307dd0a9c5 523 SMART SM00382 38 230 7.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_05890 9d5d8f1854c8b6d59be512307dd0a9c5 523 Pfam PF00005 ABC transporter 279 436 4.9E-8 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_05890 9d5d8f1854c8b6d59be512307dd0a9c5 523 Gene3D G3DSA:3.40.50.300 265 500 9.4E-33 T 14-10-2018 C3497_05890 9d5d8f1854c8b6d59be512307dd0a9c5 523 Pfam PF00005 ABC transporter 31 174 1.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_05890 9d5d8f1854c8b6d59be512307dd0a9c5 523 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_05890 9d5d8f1854c8b6d59be512307dd0a9c5 523 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_05890 9d5d8f1854c8b6d59be512307dd0a9c5 523 SUPERFAMILY SSF52540 13 232 1.59E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05890 9d5d8f1854c8b6d59be512307dd0a9c5 523 SUPERFAMILY SSF52540 278 491 5.92E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11230 742f546fbdd05f709def2de51286cea2 275 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 122 268 1.4E-38 T 14-10-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system C3497_11230 742f546fbdd05f709def2de51286cea2 275 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 31 118 3.4E-26 T 14-10-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain C3497_11470 26cdea1d02dd717e3d4299148764933c 155 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 146 4.2E-59 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 C3497_11470 26cdea1d02dd717e3d4299148764933c 155 Pfam PF02470 MlaD protein 39 116 2.8E-21 T 14-10-2018 IPR003399 Mce/MlaD C3497_13730 ed1e90368ef3e2670fc6f7bd16739036 368 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 183 1.7E-28 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase C3497_08555 5382ae54cda27c9920d88db089af663a 346 Gene3D G3DSA:3.30.420.470 140 340 2.2E-16 T 14-10-2018 C3497_08555 5382ae54cda27c9920d88db089af663a 346 Pfam PF13358 DDE superfamily endonuclease 173 311 6.0E-33 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain C3497_08555 5382ae54cda27c9920d88db089af663a 346 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 17 62 1.8E-6 T 14-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 C3497_08555 5382ae54cda27c9920d88db089af663a 346 Pfam PF13592 Winged helix-turn helix 99 157 2.4E-18 T 14-10-2018 IPR025959 Winged helix-turn helix domain C3497_08555 5382ae54cda27c9920d88db089af663a 346 SUPERFAMILY SSF46689 15 133 7.17E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_09950 a23d46905106dc2dd7e82ab1338e0b5c 246 SMART SM00100 26 147 2.0E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_09950 a23d46905106dc2dd7e82ab1338e0b5c 246 SUPERFAMILY SSF51206 19 158 2.09E-28 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C3497_09950 a23d46905106dc2dd7e82ab1338e0b5c 246 Gene3D G3DSA:1.10.10.10 161 242 5.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_09950 a23d46905106dc2dd7e82ab1338e0b5c 246 Pfam PF00027 Cyclic nucleotide-binding domain 45 129 2.2E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3497_09950 a23d46905106dc2dd7e82ab1338e0b5c 246 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 189 205 1.0E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_09950 a23d46905106dc2dd7e82ab1338e0b5c 246 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 205 220 1.0E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_09950 a23d46905106dc2dd7e82ab1338e0b5c 246 Gene3D G3DSA:2.60.120.10 39 159 6.5E-40 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3497_09950 a23d46905106dc2dd7e82ab1338e0b5c 246 Pfam PF13545 Crp-like helix-turn-helix domain 164 238 6.1E-20 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_09950 a23d46905106dc2dd7e82ab1338e0b5c 246 SUPERFAMILY SSF46785 162 240 7.61E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_09950 a23d46905106dc2dd7e82ab1338e0b5c 246 SMART SM00419 183 231 5.5E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3497_06600 bc7cea7ceda0222abee2859f9f2948e6 266 Gene3D G3DSA:1.10.12.10 210 266 1.4E-25 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal C3497_06600 bc7cea7ceda0222abee2859f9f2948e6 266 Gene3D G3DSA:3.90.226.10 11 208 6.1E-66 T 14-10-2018 C3497_06600 bc7cea7ceda0222abee2859f9f2948e6 266 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 108 128 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 C3497_06600 bc7cea7ceda0222abee2859f9f2948e6 266 SUPERFAMILY SSF52096 13 266 1.3E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_06600 bc7cea7ceda0222abee2859f9f2948e6 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 265 6.0E-60 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3497_11155 c134b46c49be58fc9e7412d112009ce1 124 Pfam PF11190 Protein of unknown function (DUF2976) 37 123 6.7E-33 T 14-10-2018 IPR021356 Integrating conjugative element protein PFL4702 C3497_11155 c134b46c49be58fc9e7412d112009ce1 124 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 21 124 1.4E-45 T 14-10-2018 IPR021356 Integrating conjugative element protein PFL4702 C3497_07980 23af68a75c6a12719fa887700ab09b73 168 SUPERFAMILY SSF50447 1 93 3.53E-20 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3497_07980 23af68a75c6a12719fa887700ab09b73 168 Pfam PF05239 PRC-barrel domain 96 162 1.0E-5 T 14-10-2018 IPR027275 PRC-barrel domain C3497_07980 23af68a75c6a12719fa887700ab09b73 168 SUPERFAMILY SSF50346 99 167 4.32E-18 T 14-10-2018 IPR011033 PRC-barrel-like superfamily C3497_07980 23af68a75c6a12719fa887700ab09b73 168 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 1 168 22.461 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 C3497_07980 23af68a75c6a12719fa887700ab09b73 168 Gene3D G3DSA:2.40.30.60 1 93 5.0E-26 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 C3497_07980 23af68a75c6a12719fa887700ab09b73 168 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 1 167 6.8E-45 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 C3497_07980 23af68a75c6a12719fa887700ab09b73 168 Pfam PF01782 RimM N-terminal domain 4 90 9.0E-25 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 C3497_07980 23af68a75c6a12719fa887700ab09b73 168 Gene3D G3DSA:2.30.30.240 94 168 2.1E-24 T 14-10-2018 C3497_02350 16989a63bf8ce20d67ee74eded03c5e2 533 Gene3D G3DSA:3.40.50.300 24 186 4.8E-10 T 14-10-2018 C3497_02350 16989a63bf8ce20d67ee74eded03c5e2 533 SUPERFAMILY SSF52540 28 288 1.61E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13530 9371d96c4f2b3b1517feeb51a3c77d13 273 Gene3D G3DSA:3.30.1150.10 177 271 2.3E-23 T 14-10-2018 C3497_13530 9371d96c4f2b3b1517feeb51a3c77d13 273 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 192 270 8.9E-23 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 C3497_13530 9371d96c4f2b3b1517feeb51a3c77d13 273 PRINTS PR01374 Gram-negative bacterial tonB protein signature 109 119 4.9E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 C3497_13530 9371d96c4f2b3b1517feeb51a3c77d13 273 PRINTS PR01374 Gram-negative bacterial tonB protein signature 209 227 4.9E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 C3497_13530 9371d96c4f2b3b1517feeb51a3c77d13 273 PRINTS PR01374 Gram-negative bacterial tonB protein signature 188 209 4.9E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 C3497_13530 9371d96c4f2b3b1517feeb51a3c77d13 273 SUPERFAMILY SSF74653 188 268 6.93E-24 T 14-10-2018 C3497_13530 9371d96c4f2b3b1517feeb51a3c77d13 273 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 194 270 5.3E-22 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C3497_03490 ee0ea1fee1291abf87c4188d206f1da4 494 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 493 1.2E-223 T 14-10-2018 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 C3497_03490 ee0ea1fee1291abf87c4188d206f1da4 494 SUPERFAMILY SSF52540 43 233 1.81E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_03490 ee0ea1fee1291abf87c4188d206f1da4 494 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 271 491 1.1E-85 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related C3497_03490 ee0ea1fee1291abf87c4188d206f1da4 494 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 233 4.0E-52 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related C3497_03490 ee0ea1fee1291abf87c4188d206f1da4 494 Gene3D G3DSA:3.40.50.300 1 237 1.9E-79 T 14-10-2018 C3497_03490 ee0ea1fee1291abf87c4188d206f1da4 494 Gene3D G3DSA:3.40.50.300 241 494 3.8E-102 T 14-10-2018 C3497_03490 ee0ea1fee1291abf87c4188d206f1da4 494 SUPERFAMILY SSF52540 301 489 1.81E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09205 af3ef65ef914aa6472787ad69219995b 293 Pfam PF01297 Zinc-uptake complex component A periplasmic 21 292 3.5E-33 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 C3497_09205 af3ef65ef914aa6472787ad69219995b 293 Gene3D G3DSA:3.40.50.1980 18 179 3.2E-31 T 14-10-2018 C3497_09205 af3ef65ef914aa6472787ad69219995b 293 SUPERFAMILY SSF53807 6 292 7.36E-46 T 14-10-2018 C3497_13405 f6a339f337acf69bf6ce74a95b45b774 162 SUPERFAMILY SSF88659 75 159 4.58E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3497_13405 f6a339f337acf69bf6ce74a95b45b774 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 146 1.1E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C3497_13405 f6a339f337acf69bf6ce74a95b45b774 162 Pfam PF08281 Sigma-70, region 4 102 146 2.8E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_13405 f6a339f337acf69bf6ce74a95b45b774 162 Gene3D G3DSA:1.10.10.10 75 160 5.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_13405 f6a339f337acf69bf6ce74a95b45b774 162 SUPERFAMILY SSF88946 2 76 4.32E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C3497_13405 f6a339f337acf69bf6ce74a95b45b774 162 Pfam PF04542 Sigma-70 region 2 2 67 1.6E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C3497_13405 f6a339f337acf69bf6ce74a95b45b774 162 Gene3D G3DSA:1.10.1740.10 1 70 2.8E-6 T 14-10-2018 C3497_07085 63218b231c18eb313855a4588b5d9c42 116 PIRSF PIRSF000169 1 116 1.1E-36 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 C3497_07085 63218b231c18eb313855a4588b5d9c42 116 Gene3D G3DSA:1.20.1300.10 1 116 1.4E-31 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07085 63218b231c18eb313855a4588b5d9c42 116 SUPERFAMILY SSF81343 5 116 1.79E-29 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07085 63218b231c18eb313855a4588b5d9c42 116 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 103 8.2E-15 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3497_07085 63218b231c18eb313855a4588b5d9c42 116 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 114 2.4E-37 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 Pfam PF00258 Flavodoxin 48 169 7.3E-24 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 Gene3D G3DSA:3.40.50.80 312 455 9.8E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 Gene3D G3DSA:3.40.50.360 43 182 7.1E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 Gene3D G3DSA:2.40.30.10 215 305 3.3E-5 T 14-10-2018 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 SUPERFAMILY SSF63380 207 316 1.18E-11 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 258 265 4.7E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 240 250 4.7E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 323 342 4.7E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 414 422 4.7E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 347 356 4.7E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 SUPERFAMILY SSF52218 45 182 2.1E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 Pfam PF00175 Oxidoreductase NAD-binding domain 324 429 1.1E-7 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 PRINTS PR00369 Flavodoxin signature 125 135 7.0E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 PRINTS PR00369 Flavodoxin signature 149 168 7.0E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 PRINTS PR00369 Flavodoxin signature 46 59 7.0E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 PRINTS PR00369 Flavodoxin signature 94 105 7.0E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C3497_13475 03b762b77a23461cda11ac3b9c63a2f4 455 SUPERFAMILY SSF52343 311 455 3.67E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3497_14525 960cef6f5ac9bb069a0c9886fe60f08a 89 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 11 77 1.0E-34 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C3497_14525 960cef6f5ac9bb069a0c9886fe60f08a 89 Pfam PF01809 Haemolytic domain 6 71 1.3E-31 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C3497_14525 960cef6f5ac9bb069a0c9886fe60f08a 89 SMART SM01234 4 71 1.1E-47 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C3497_14525 960cef6f5ac9bb069a0c9886fe60f08a 89 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 18 71 2.0E-18 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C3497_14525 960cef6f5ac9bb069a0c9886fe60f08a 89 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 4 72 26.378 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C3497_00215 56d8aaea87389dad90bb79c7a33897e9 222 PIRSF PIRSF006102 2 212 6.4E-67 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_00215 56d8aaea87389dad90bb79c7a33897e9 222 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 193 3.0E-61 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_00215 56d8aaea87389dad90bb79c7a33897e9 222 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 1 206 36.666 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 C3497_00215 56d8aaea87389dad90bb79c7a33897e9 222 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 206 3.0E-105 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 C3497_13895 9ac7be51b7c83f0084e69908b1654124 338 SUPERFAMILY SSF56529 77 335 1.44E-60 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 C3497_13895 9ac7be51b7c83f0084e69908b1654124 338 Gene3D G3DSA:3.90.850.10 1 337 9.6E-145 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 C3497_13895 9ac7be51b7c83f0084e69908b1654124 338 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 334 1.5E-42 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 C3497_09670 535563ca3672c1ea398e30bef4cf3e55 655 SUPERFAMILY SSF51735 292 572 1.97E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_09670 535563ca3672c1ea398e30bef4cf3e55 655 Pfam PF13727 CoA-binding domain 87 250 4.6E-7 T 14-10-2018 C3497_09670 535563ca3672c1ea398e30bef4cf3e55 655 SUPERFAMILY SSF53335 129 338 3.32E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_09670 535563ca3672c1ea398e30bef4cf3e55 655 Gene3D G3DSA:3.40.50.720 290 629 1.1E-112 T 14-10-2018 C3497_09670 535563ca3672c1ea398e30bef4cf3e55 655 Gene3D G3DSA:3.40.50.720 156 276 3.0E-31 T 14-10-2018 C3497_09670 535563ca3672c1ea398e30bef4cf3e55 655 Pfam PF02719 Polysaccharide biosynthesis protein 295 594 5.6E-123 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain C3497_14150 fd8e019cf3c464f0e0057b4d37f63373 243 SUPERFAMILY SSF52540 8 241 4.11E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14150 fd8e019cf3c464f0e0057b4d37f63373 243 Pfam PF00005 ABC transporter 26 170 6.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_14150 fd8e019cf3c464f0e0057b4d37f63373 243 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 223 241 2.1E-5 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal C3497_14150 fd8e019cf3c464f0e0057b4d37f63373 243 Gene3D G3DSA:3.40.50.300 7 243 9.5E-61 T 14-10-2018 C3497_14150 fd8e019cf3c464f0e0057b4d37f63373 243 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_14150 fd8e019cf3c464f0e0057b4d37f63373 243 SMART SM00382 34 219 9.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_12795 abc7103d20df30bc3a57253fd00ff3e6 356 Gene3D G3DSA:3.40.50.2000 150 336 1.9E-53 T 14-10-2018 C3497_12795 abc7103d20df30bc3a57253fd00ff3e6 356 Pfam PF00534 Glycosyl transferases group 1 166 331 2.6E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3497_12795 abc7103d20df30bc3a57253fd00ff3e6 356 Gene3D G3DSA:3.40.50.2000 72 349 1.9E-53 T 14-10-2018 C3497_12795 abc7103d20df30bc3a57253fd00ff3e6 356 SUPERFAMILY SSF53756 4 355 3.49E-66 T 14-10-2018 C3497_07440 ccd94e38d1faab14649928c0f645cb00 259 PIRSF PIRSF000094 4 259 1.5E-85 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3497_07440 ccd94e38d1faab14649928c0f645cb00 259 Gene3D G3DSA:3.40.50.720 3 259 2.7E-58 T 14-10-2018 C3497_07440 ccd94e38d1faab14649928c0f645cb00 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 256 4.5E-79 T 14-10-2018 C3497_07440 ccd94e38d1faab14649928c0f645cb00 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 6.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_07440 ccd94e38d1faab14649928c0f645cb00 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 6.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_07440 ccd94e38d1faab14649928c0f645cb00 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 6.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_07440 ccd94e38d1faab14649928c0f645cb00 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 6.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_07440 ccd94e38d1faab14649928c0f645cb00 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 6.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3497_07440 ccd94e38d1faab14649928c0f645cb00 259 SUPERFAMILY SSF51735 8 258 1.29E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_07365 38feaf5912ac1c1aee36255c45a2ecd0 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 44.943 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 C3497_07365 38feaf5912ac1c1aee36255c45a2ecd0 238 Gene3D G3DSA:3.40.1160.10 2 238 3.0E-79 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3497_07365 38feaf5912ac1c1aee36255c45a2ecd0 238 PIRSF PIRSF005650 1 238 5.8E-92 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 C3497_07365 38feaf5912ac1c1aee36255c45a2ecd0 238 Pfam PF00696 Amino acid kinase family 7 215 7.8E-29 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C3497_07365 38feaf5912ac1c1aee36255c45a2ecd0 238 SUPERFAMILY SSF53633 5 237 2.09E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3497_07365 38feaf5912ac1c1aee36255c45a2ecd0 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 3.1E-101 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 Gene3D G3DSA:3.40.50.1980 27 179 3.0E-51 T 14-10-2018 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 SUPERFAMILY SSF53807 25 306 1.57E-89 T 14-10-2018 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00691 Adhesin B signature 285 303 1.2E-29 T 14-10-2018 IPR006129 Adhesin B GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00691 Adhesin B signature 26 47 1.2E-29 T 14-10-2018 IPR006129 Adhesin B GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00691 Adhesin B signature 242 259 1.2E-29 T 14-10-2018 IPR006129 Adhesin B GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00691 Adhesin B signature 264 282 1.2E-29 T 14-10-2018 IPR006129 Adhesin B GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00691 Adhesin B signature 193 210 1.2E-29 T 14-10-2018 IPR006129 Adhesin B GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00691 Adhesin B signature 135 154 1.2E-29 T 14-10-2018 IPR006129 Adhesin B GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00691 Adhesin B signature 51 69 1.2E-29 T 14-10-2018 IPR006129 Adhesin B GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00691 Adhesin B signature 70 89 1.2E-29 T 14-10-2018 IPR006129 Adhesin B GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00690 Adhesin family signature 272 291 1.0E-29 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00690 Adhesin family signature 70 87 1.0E-29 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00690 Adhesin family signature 193 214 1.0E-29 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00690 Adhesin family signature 26 44 1.0E-29 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00690 Adhesin family signature 57 70 1.0E-29 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 PRINTS PR00690 Adhesin family signature 246 264 1.0E-29 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 Pfam PF01297 Zinc-uptake complex component A periplasmic 29 302 3.7E-82 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 C3497_00510 bf3c773f5bbbe098118d5d2bded0105d 309 Gene3D G3DSA:3.40.50.1980 182 308 4.2E-45 T 14-10-2018 C3497_07535 cc0d2ff9f0059009e7313a8d2b70e638 277 Pfam PF02616 Segregation and condensation protein ScpA 58 269 2.0E-29 T 14-10-2018 IPR003768 Segregation and condensation protein A C3497_07535 cc0d2ff9f0059009e7313a8d2b70e638 277 Hamap MF_01805 Segregation and condensation protein A [scpA]. 41 271 21.522 T 14-10-2018 IPR003768 Segregation and condensation protein A C3497_06715 4bab8b92f537eefbfb9d02fee21113ac 203 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 200 19.025 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 C3497_06715 4bab8b92f537eefbfb9d02fee21113ac 203 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 200 2.6E-50 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 C3497_06715 4bab8b92f537eefbfb9d02fee21113ac 203 Pfam PF04279 Intracellular septation protein A 1 199 4.1E-69 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 C3497_02360 3c23ad1d684c82a2bccda5261856c982 365 Gene3D G3DSA:3.20.20.110 109 365 6.3E-87 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C3497_02360 3c23ad1d684c82a2bccda5261856c982 365 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 114 346 1.2E-18 T 14-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C3497_02360 3c23ad1d684c82a2bccda5261856c982 365 Gene3D G3DSA:3.30.70.150 1 108 6.1E-29 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C3497_02360 3c23ad1d684c82a2bccda5261856c982 365 SUPERFAMILY SSF54966 2 110 4.84E-15 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C3497_02360 3c23ad1d684c82a2bccda5261856c982 365 SUPERFAMILY SSF51649 109 346 1.83E-58 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C3497_00295 5940b73892d6548f16503cad05440e3c 496 Gene3D G3DSA:3.40.1670.10 346 463 3.7E-49 T 14-10-2018 C3497_00295 5940b73892d6548f16503cad05440e3c 496 Gene3D G3DSA:1.20.5.570 464 496 4.5E-16 T 14-10-2018 C3497_00295 5940b73892d6548f16503cad05440e3c 496 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 464 7.1E-169 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 C3497_00295 5940b73892d6548f16503cad05440e3c 496 SUPERFAMILY SSF143968 332 496 2.88E-67 T 14-10-2018 C3497_00295 5940b73892d6548f16503cad05440e3c 496 SUPERFAMILY SSF50475 3 331 1.57E-121 T 14-10-2018 C3497_00295 5940b73892d6548f16503cad05440e3c 496 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 496 71.731 T 14-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 C3497_00295 5940b73892d6548f16503cad05440e3c 496 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 440 3.8E-171 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 C3497_06250 721118f23a59ff1c51b4bb645e88ec04 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.306 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 C3497_06250 721118f23a59ff1c51b4bb645e88ec04 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 190 7.0E-82 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 C3497_06250 721118f23a59ff1c51b4bb645e88ec04 193 PIRSF PIRSF006102 1 193 3.8E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_06250 721118f23a59ff1c51b4bb645e88ec04 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 190 2.0E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_12540 f71a13dc397face4532c4c0c9f64fb94 116 SUPERFAMILY SSF88723 56 109 2.75E-6 T 14-10-2018 IPR029060 PIN-like domain superfamily C3497_12540 f71a13dc397face4532c4c0c9f64fb94 116 Pfam PF13470 PIN domain 55 89 3.5E-6 T 14-10-2018 IPR002716 PIN domain C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 Gene3D G3DSA:1.10.560.10 8 521 4.0E-242 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 Gene3D G3DSA:3.50.7.10 192 372 4.0E-242 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 SUPERFAMILY SSF48592 7 521 2.06E-78 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 Gene3D G3DSA:3.30.260.10 136 410 4.0E-242 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 Hamap MF_00600 60 kDa chaperonin [groL]. 2 538 41.343 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.7E-102 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 SUPERFAMILY SSF52029 185 376 5.58E-82 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 SUPERFAMILY SSF54849 137 203 1.42E-25 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily C3497_00775 86dd19adc1791f2fd0da9ffcb89217b3 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.7E-259 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3497_01980 677ae2ae22213c3707b935afb71d323d 129 SUPERFAMILY SSF53137 14 129 1.57E-47 T 14-10-2018 C3497_01980 677ae2ae22213c3707b935afb71d323d 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.833 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 C3497_01980 677ae2ae22213c3707b935afb71d323d 129 PIRSF PIRSF002131 1 129 2.9E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 C3497_01980 677ae2ae22213c3707b935afb71d323d 129 Gene3D G3DSA:3.30.420.80 1 129 4.3E-57 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 C3497_01980 677ae2ae22213c3707b935afb71d323d 129 Pfam PF00411 Ribosomal protein S11 19 128 1.2E-50 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 C3497_01980 677ae2ae22213c3707b935afb71d323d 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.3E-56 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01980 677ae2ae22213c3707b935afb71d323d 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site C3497_00560 7ea43e6f0e530b130a9f4024534cf8d1 676 Gene3D G3DSA:2.170.130.10 56 175 6.2E-18 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_00560 7ea43e6f0e530b130a9f4024534cf8d1 676 Gene3D G3DSA:2.40.170.20 176 676 3.9E-70 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3497_00560 7ea43e6f0e530b130a9f4024534cf8d1 676 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 659 676 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site C3497_00560 7ea43e6f0e530b130a9f4024534cf8d1 676 Pfam PF00593 TonB dependent receptor 258 675 1.3E-41 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_00560 7ea43e6f0e530b130a9f4024534cf8d1 676 SUPERFAMILY SSF56935 36 676 7.33E-93 T 14-10-2018 C3497_00560 7ea43e6f0e530b130a9f4024534cf8d1 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 164 2.6E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_04015 e191e874d908d3f4c7f322b0d3a6ba68 150 Pfam PF00571 CBS domain 15 59 8.3E-6 T 14-10-2018 IPR000644 CBS domain C3497_04015 e191e874d908d3f4c7f322b0d3a6ba68 150 Pfam PF00571 CBS domain 71 125 1.2E-8 T 14-10-2018 IPR000644 CBS domain C3497_04015 e191e874d908d3f4c7f322b0d3a6ba68 150 SMART SM00116 78 125 0.0054 T 14-10-2018 IPR000644 CBS domain C3497_04015 e191e874d908d3f4c7f322b0d3a6ba68 150 SMART SM00116 13 60 3.5E-4 T 14-10-2018 IPR000644 CBS domain C3497_04015 e191e874d908d3f4c7f322b0d3a6ba68 150 Gene3D G3DSA:3.10.580.10 1 141 4.7E-33 T 14-10-2018 C3497_04015 e191e874d908d3f4c7f322b0d3a6ba68 150 SUPERFAMILY SSF54631 13 142 1.89E-27 T 14-10-2018 C3497_07625 76d50af80c92bb497424f797a9051bfc 126 Gene3D G3DSA:2.40.50.100 2 126 1.7E-46 T 14-10-2018 C3497_07625 76d50af80c92bb497424f797a9051bfc 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C3497_07625 76d50af80c92bb497424f797a9051bfc 126 SUPERFAMILY SSF51230 3 124 2.88E-39 T 14-10-2018 IPR011053 Single hybrid motif C3497_07625 76d50af80c92bb497424f797a9051bfc 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 39.458 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 C3497_07625 76d50af80c92bb497424f797a9051bfc 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 123 1.7E-45 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 C3497_07625 76d50af80c92bb497424f797a9051bfc 126 Pfam PF01597 Glycine cleavage H-protein 8 123 2.1E-41 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate C3497_04520 23e136e4b9d345dae4812eb821cfac81 263 Pfam PF09955 Predicted integral membrane protein (DUF2189) 71 192 8.4E-41 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 C3497_07410 179c562ede76011c8077478067a91ae1 833 Pfam PF02687 FtsX-like permease family 730 823 1.2E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3497_07410 179c562ede76011c8077478067a91ae1 833 Pfam PF12704 MacB-like periplasmic core domain 20 224 1.4E-8 T 14-10-2018 IPR025857 MacB-like periplasmic core domain C3497_14735 5508b9523002c54be15a893c2f40c8dc 368 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 71 290 5.1E-78 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 C3497_14735 5508b9523002c54be15a893c2f40c8dc 368 Pfam PF02481 DNA recombination-mediator protein A 75 281 1.9E-77 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 C3497_14735 5508b9523002c54be15a893c2f40c8dc 368 Gene3D G3DSA:3.40.50.450 1 292 9.7E-107 T 14-10-2018 C3497_14735 5508b9523002c54be15a893c2f40c8dc 368 Gene3D G3DSA:1.10.10.10 294 366 3.9E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_14735 5508b9523002c54be15a893c2f40c8dc 368 SUPERFAMILY SSF102405 83 290 8.85E-47 T 14-10-2018 C3497_09690 6820134137ab8d46b69395f2255b7a63 150 SUPERFAMILY SSF109709 66 121 5.49E-7 T 14-10-2018 C3497_06730 19267ada2123111802bf26a000f4a4f6 245 SMART SM00862 158 234 1.6E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_06730 19267ada2123111802bf26a000f4a4f6 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 3.9E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_06730 19267ada2123111802bf26a000f4a4f6 245 SUPERFAMILY SSF52172 6 127 7.83E-42 T 14-10-2018 IPR011006 CheY-like superfamily C3497_06730 19267ada2123111802bf26a000f4a4f6 245 SUPERFAMILY SSF46894 135 236 1.76E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_06730 19267ada2123111802bf26a000f4a4f6 245 Gene3D G3DSA:3.40.50.2300 1 126 3.6E-40 T 14-10-2018 C3497_06730 19267ada2123111802bf26a000f4a4f6 245 SMART SM00448 7 118 9.5E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_06730 19267ada2123111802bf26a000f4a4f6 245 Pfam PF00072 Response regulator receiver domain 9 118 1.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_06730 19267ada2123111802bf26a000f4a4f6 245 Gene3D G3DSA:1.10.10.10 132 240 1.8E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_10290 bed6e40f8defc03ec44fc20b8ed53085 87 SMART SM00834 1 42 5.2E-19 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C3497_10290 bed6e40f8defc03ec44fc20b8ed53085 87 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 1.8E-22 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C3497_10290 bed6e40f8defc03ec44fc20b8ed53085 87 Pfam PF09723 Zinc ribbon domain 1 40 5.3E-16 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C3497_02730 1cf7ddba0dc272d2c44f133ab57e43e2 291 Gene3D G3DSA:1.10.10.10 1 91 1.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_02730 1cf7ddba0dc272d2c44f133ab57e43e2 291 SUPERFAMILY SSF46785 3 85 2.33E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_02730 1cf7ddba0dc272d2c44f133ab57e43e2 291 Pfam PF03466 LysR substrate binding domain 121 287 7.5E-15 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_02730 1cf7ddba0dc272d2c44f133ab57e43e2 291 Gene3D G3DSA:3.40.190.10 166 267 6.8E-9 T 14-10-2018 C3497_02730 1cf7ddba0dc272d2c44f133ab57e43e2 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_02730 1cf7ddba0dc272d2c44f133ab57e43e2 291 SUPERFAMILY SSF53850 92 288 1.38E-26 T 14-10-2018 C3497_02730 1cf7ddba0dc272d2c44f133ab57e43e2 291 Gene3D G3DSA:3.40.190.10 117 283 6.8E-9 T 14-10-2018 C3497_03690 b57ded5aae36f1cd50dc023d6d9a62bd 361 PIRSF PIRSF001361 1 356 7.2E-163 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 C3497_03690 b57ded5aae36f1cd50dc023d6d9a62bd 361 Gene3D G3DSA:3.20.20.70 5 354 1.9E-165 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_03690 b57ded5aae36f1cd50dc023d6d9a62bd 361 SUPERFAMILY SSF51569 11 352 2.47E-140 T 14-10-2018 C3497_03690 b57ded5aae36f1cd50dc023d6d9a62bd 361 Pfam PF00793 DAHP synthetase I family 43 341 2.9E-109 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3497_03690 b57ded5aae36f1cd50dc023d6d9a62bd 361 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 353 7.5E-169 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 C3497_13815 ad22384bee1f01a276b9300a48f06c4b 186 Pfam PF13519 von Willebrand factor type A domain 29 125 1.4E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A C3497_13815 ad22384bee1f01a276b9300a48f06c4b 186 SUPERFAMILY SSF53300 28 135 7.31E-11 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C3497_13815 ad22384bee1f01a276b9300a48f06c4b 186 Gene3D G3DSA:3.40.50.410 26 165 3.3E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C3497_14020 30502d36a2087a354d405d0c295a3716 394 Gene3D G3DSA:1.10.3720.10 79 178 8.3E-7 T 14-10-2018 IPR035906 MetI-like superfamily C3497_14020 30502d36a2087a354d405d0c295a3716 394 SUPERFAMILY SSF161098 84 157 2.75E-13 T 14-10-2018 IPR035906 MetI-like superfamily C3497_14020 30502d36a2087a354d405d0c295a3716 394 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 235 389 4.8E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_14020 30502d36a2087a354d405d0c295a3716 394 SUPERFAMILY SSF161098 178 376 5.36E-26 T 14-10-2018 IPR035906 MetI-like superfamily C3497_14020 30502d36a2087a354d405d0c295a3716 394 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 85 148 3.0E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 C3497_14020 30502d36a2087a354d405d0c295a3716 394 Gene3D G3DSA:1.10.3720.10 179 390 1.5E-34 T 14-10-2018 IPR035906 MetI-like superfamily C3497_06955 1fac33279c3f6a6a76a24dc3ed2daa29 243 Gene3D G3DSA:3.40.50.150 17 221 8.0E-30 T 14-10-2018 C3497_06955 1fac33279c3f6a6a76a24dc3ed2daa29 243 Pfam PF02390 Putative methyltransferase 55 216 1.4E-12 T 14-10-2018 C3497_06955 1fac33279c3f6a6a76a24dc3ed2daa29 243 SUPERFAMILY SSF53335 53 217 3.0E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_04325 129e5375bb5b421cbc5f35e2c7a7a640 370 PIRSF PIRSF005508 4 362 2.5E-117 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 C3497_04325 129e5375bb5b421cbc5f35e2c7a7a640 370 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 344 3.9E-118 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 C3497_04325 129e5375bb5b421cbc5f35e2c7a7a640 370 Gene3D G3DSA:1.20.1530.20 9 346 2.1E-15 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C3497_04325 129e5375bb5b421cbc5f35e2c7a7a640 370 Pfam PF01758 Sodium Bile acid symporter family 64 257 1.2E-34 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 C3497_04550 fafbadf32d0bf4eb18bb58b1ccf5c237 199 Gene3D G3DSA:3.40.630.30 20 177 3.8E-32 T 14-10-2018 C3497_04550 fafbadf32d0bf4eb18bb58b1ccf5c237 199 Pfam PF00583 Acetyltransferase (GNAT) family 84 156 2.3E-9 T 14-10-2018 IPR000182 GNAT domain C3497_04550 fafbadf32d0bf4eb18bb58b1ccf5c237 199 SUPERFAMILY SSF55729 21 168 5.49E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_06720 9d2380c1ffa2cdac3c66afe5b6e61363 143 Pfam PF01152 Bacterial-like globin 14 132 5.2E-39 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 C3497_06720 9d2380c1ffa2cdac3c66afe5b6e61363 143 SUPERFAMILY SSF46458 12 132 2.47E-34 T 14-10-2018 IPR009050 Globin-like superfamily C3497_06720 9d2380c1ffa2cdac3c66afe5b6e61363 143 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 61 85 - T 14-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 C3497_06720 9d2380c1ffa2cdac3c66afe5b6e61363 143 Gene3D G3DSA:1.10.490.10 9 139 2.7E-43 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 C3497_05935 e421da014ec444e6bad85f8af4e5c6dd 122 SUPERFAMILY SSF52172 3 121 6.12E-35 T 14-10-2018 IPR011006 CheY-like superfamily C3497_05935 e421da014ec444e6bad85f8af4e5c6dd 122 SMART SM00448 3 116 4.9E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05935 e421da014ec444e6bad85f8af4e5c6dd 122 Gene3D G3DSA:3.40.50.12740 1 121 5.6E-37 T 14-10-2018 C3497_05935 e421da014ec444e6bad85f8af4e5c6dd 122 Pfam PF00072 Response regulator receiver domain 5 115 8.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_05145 19a1e5c7ed96da23eee1b2976c94c4cc 679 SUPERFAMILY SSF58104 370 679 4.71E-76 T 14-10-2018 C3497_05145 19a1e5c7ed96da23eee1b2976c94c4cc 679 Gene3D G3DSA:1.10.287.950 350 679 1.8E-77 T 14-10-2018 C3497_05145 19a1e5c7ed96da23eee1b2976c94c4cc 679 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 484 645 3.8E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_05145 19a1e5c7ed96da23eee1b2976c94c4cc 679 SMART SM00283 417 678 2.6E-77 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_05145 19a1e5c7ed96da23eee1b2976c94c4cc 679 SMART SM00304 350 402 3.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05145 19a1e5c7ed96da23eee1b2976c94c4cc 679 SMART SM00304 619 675 99.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05145 19a1e5c7ed96da23eee1b2976c94c4cc 679 Pfam PF00672 HAMP domain 352 395 7.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_05655 0dc9454712fba226fc20e99965be121c 86 Pfam PF12978 Domain of Unknown Function with PDB structure (DUF3862) 21 53 8.3E-6 T 14-10-2018 IPR024418 Protein of unknown function DUF3862 C3497_05655 0dc9454712fba226fc20e99965be121c 86 Gene3D G3DSA:3.30.1450.10 21 59 5.7E-7 T 14-10-2018 IPR037873 BamE-like C3497_07795 f100325f05ee95a3f3356a23166ecbc9 204 SUPERFAMILY SSF46626 58 199 3.25E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_07795 f100325f05ee95a3f3356a23166ecbc9 204 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 105 196 1.0E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_07795 f100325f05ee95a3f3356a23166ecbc9 204 Gene3D G3DSA:1.10.760.10 91 203 1.1E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_00075 520b06bf21decc49ddc0c2be2bce9c09 723 Gene3D G3DSA:3.30.1490.20 219 309 1.0E-21 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3497_00075 520b06bf21decc49ddc0c2be2bce9c09 723 SUPERFAMILY SSF56059 219 491 3.01E-35 T 14-10-2018 C3497_00075 520b06bf21decc49ddc0c2be2bce9c09 723 Pfam PF13549 ATP-grasp domain 223 285 9.1E-9 T 14-10-2018 C3497_00075 520b06bf21decc49ddc0c2be2bce9c09 723 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 7 715 2.7E-254 T 14-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 C3497_00075 520b06bf21decc49ddc0c2be2bce9c09 723 SMART SM01209 218 338 0.0067 T 14-10-2018 C3497_00075 520b06bf21decc49ddc0c2be2bce9c09 723 SUPERFAMILY SSF53623 483 716 9.16E-14 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_00075 520b06bf21decc49ddc0c2be2bce9c09 723 Gene3D G3DSA:3.30.470.20 388 475 2.6E-6 T 14-10-2018 C3497_00075 520b06bf21decc49ddc0c2be2bce9c09 723 Gene3D G3DSA:3.40.1190.10 480 717 6.3E-14 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_01520 27adaa363be2daf6ad79d7b00d81d022 391 Pfam PF01435 Peptidase family M48 106 332 1.4E-9 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3497_01520 27adaa363be2daf6ad79d7b00d81d022 391 SUPERFAMILY SSF103473 42 175 8.37E-5 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_14170 c7907e7128bb90856d6728eaac2a3195 233 SUPERFAMILY SSF56935 150 219 1.67E-6 T 14-10-2018 C3497_14170 c7907e7128bb90856d6728eaac2a3195 233 Gene3D G3DSA:2.40.160.10 125 230 7.6E-7 T 14-10-2018 IPR023614 Porin domain superfamily C3497_14170 c7907e7128bb90856d6728eaac2a3195 233 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 26 220 8.6E-61 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 C3497_14170 c7907e7128bb90856d6728eaac2a3195 233 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 233 3.3E-61 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 C3497_10630 f2d3a88f076812ee70ccbc0c2900851c 361 SUPERFAMILY SSF53098 201 331 5.88E-7 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_10630 f2d3a88f076812ee70ccbc0c2900851c 361 Pfam PF13358 DDE superfamily endonuclease 169 314 4.1E-24 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain C3497_10630 f2d3a88f076812ee70ccbc0c2900851c 361 SUPERFAMILY SSF46689 29 132 5.97E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_10630 f2d3a88f076812ee70ccbc0c2900851c 361 Pfam PF13384 Homeodomain-like domain 29 74 6.6E-9 T 14-10-2018 C3497_02775 475098c13236042ddf7715f80839d5be 267 Gene3D G3DSA:1.25.40.10 45 265 3.1E-47 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_02775 475098c13236042ddf7715f80839d5be 267 Pfam PF13429 Tetratricopeptide repeat 84 207 4.9E-10 T 14-10-2018 C3497_02775 475098c13236042ddf7715f80839d5be 267 SUPERFAMILY SSF81901 52 228 8.37E-22 T 14-10-2018 C3497_02775 475098c13236042ddf7715f80839d5be 267 SMART SM00028 84 117 0.026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_02775 475098c13236042ddf7715f80839d5be 267 SMART SM00028 154 187 1.3E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_02775 475098c13236042ddf7715f80839d5be 267 SMART SM00028 50 83 90.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_02775 475098c13236042ddf7715f80839d5be 267 SMART SM00028 188 221 64.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_02775 475098c13236042ddf7715f80839d5be 267 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 12 252 2.5E-60 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW C3497_00055 22be90a4c3ab4c04f7760d01755f2cde 327 Gene3D G3DSA:3.30.750.24 82 169 4.8E-7 T 14-10-2018 IPR036513 STAS domain superfamily C3497_00055 22be90a4c3ab4c04f7760d01755f2cde 327 Pfam PF13466 STAS domain 242 318 1.7E-9 T 14-10-2018 IPR002645 STAS domain C3497_00055 22be90a4c3ab4c04f7760d01755f2cde 327 Gene3D G3DSA:3.30.750.24 237 326 2.8E-9 T 14-10-2018 IPR036513 STAS domain superfamily C3497_00055 22be90a4c3ab4c04f7760d01755f2cde 327 SUPERFAMILY SSF52091 241 322 2.55E-9 T 14-10-2018 IPR036513 STAS domain superfamily C3497_02990 84fee31ac6bf33d467dce43c19cccf3a 196 Pfam PF05433 Glycine zipper 2TM domain 76 116 9.8E-8 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 Pfam PF00360 Phytochrome region 322 483 5.6E-26 T 14-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 Gene3D G3DSA:3.30.450.270 302 479 1.8E-105 T 14-10-2018 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 SUPERFAMILY SSF55781 315 482 5.4E-32 T 14-10-2018 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 PRINTS PR01033 Phytochrome signature 230 251 3.0E-6 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 PRINTS PR01033 Phytochrome signature 447 465 3.0E-6 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 PRINTS PR01033 Phytochrome signature 146 165 3.0E-6 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 PRINTS PR01033 Phytochrome signature 413 432 3.0E-6 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 Pfam PF01590 GAF domain 137 285 2.9E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 Pfam PF08446 PAS fold 9 58 6.5E-7 T 14-10-2018 IPR013654 PAS fold-2 GO:0006355 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 Gene3D G3DSA:3.30.450.20 13 233 1.8E-105 T 14-10-2018 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 SUPERFAMILY SSF55781 135 292 2.51E-32 T 14-10-2018 C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 SUPERFAMILY SSF55785 5 69 4.6E-17 T 14-10-2018 IPR035965 PAS domain superfamily C3497_13600 4b1e1cef4e45221f517c4409855b3dcd 486 Gene3D G3DSA:3.30.450.40 9 460 1.8E-105 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_14250 f1655b4badc184f6d5eea781d3237fd1 459 Pfam PF16325 Peptidase family U32 C-terminal domain 377 449 1.9E-11 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal C3497_14250 f1655b4badc184f6d5eea781d3237fd1 459 Pfam PF01136 Peptidase family U32 77 357 5.3E-99 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 C3497_14250 f1655b4badc184f6d5eea781d3237fd1 459 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 C3497_14250 f1655b4badc184f6d5eea781d3237fd1 459 Gene3D G3DSA:2.40.30.10 373 449 2.1E-7 T 14-10-2018 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 569 1.1E-293 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 4.1E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 404 419 4.1E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 430 443 4.1E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 4.1E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 Pfam PF01979 Amidohydrolase family 126 452 9.6E-81 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 120 1.3E-56 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 SUPERFAMILY SSF51338 425 480 8.29E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 Gene3D G3DSA:2.30.40.10 5 483 4.2E-301 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 ProSitePatterns PS00145 Urease active site. 318 334 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 SUPERFAMILY SSF51556 130 569 2.55E-199 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 Gene3D G3DSA:3.20.20.140 130 569 4.2E-301 T 14-10-2018 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 14-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 Hamap MF_01953 Urease subunit alpha [ureC]. 3 569 57.242 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C3497_08155 a9dfc77ad0485b187be0d8920a04191d 569 SUPERFAMILY SSF51338 3 178 1.82E-65 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3497_06130 126b4a9e9669524245b331a08f04a0d4 284 Pfam PF00639 PPIC-type PPIASE domain 143 236 1.1E-20 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 C3497_06130 126b4a9e9669524245b331a08f04a0d4 284 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 177 197 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 C3497_06130 126b4a9e9669524245b331a08f04a0d4 284 Gene3D G3DSA:3.10.50.40 136 239 5.7E-35 T 14-10-2018 C3497_06130 126b4a9e9669524245b331a08f04a0d4 284 SUPERFAMILY SSF109998 29 163 4.32E-9 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C3497_06130 126b4a9e9669524245b331a08f04a0d4 284 SUPERFAMILY SSF54534 129 236 1.24E-24 T 14-10-2018 C3497_06130 126b4a9e9669524245b331a08f04a0d4 284 Gene3D G3DSA:1.10.4030.30 42 243 5.7E-35 T 14-10-2018 C3497_06130 126b4a9e9669524245b331a08f04a0d4 284 TIGRFAM TIGR02933 nifM_nitrog: nitrogen fixation protein NifM 6 274 1.2E-61 T 14-10-2018 IPR014282 Nitrogen fixation protein NifM C3497_07840 299846c0b9b03b78b5274bca1bb9c77f 258 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 258 123.126 T 14-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 C3497_07840 299846c0b9b03b78b5274bca1bb9c77f 258 SUPERFAMILY SSF48613 19 248 8.23E-72 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 C3497_07840 299846c0b9b03b78b5274bca1bb9c77f 258 Gene3D G3DSA:1.20.910.10 18 252 2.0E-66 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 C3497_07840 299846c0b9b03b78b5274bca1bb9c77f 258 Pfam PF03070 TENA/THI-4/PQQC family 28 242 8.5E-57 T 14-10-2018 IPR004305 Thiaminase-2/PQQC C3497_07840 299846c0b9b03b78b5274bca1bb9c77f 258 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 21 250 5.2E-103 T 14-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 C3497_06830 aa22eff3f239710c964dd48fcac64afa 312 Pfam PF05175 Methyltransferase small domain 146 230 6.9E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 C3497_06830 aa22eff3f239710c964dd48fcac64afa 312 SUPERFAMILY SSF53335 27 280 8.21E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_06830 aa22eff3f239710c964dd48fcac64afa 312 PIRSF PIRSF037167 10 312 7.0E-125 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 C3497_06830 aa22eff3f239710c964dd48fcac64afa 312 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 217 223 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3497_06830 aa22eff3f239710c964dd48fcac64afa 312 Gene3D G3DSA:3.40.50.150 115 291 5.8E-46 T 14-10-2018 C3497_06830 aa22eff3f239710c964dd48fcac64afa 312 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 26 301 8.4E-62 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 C3497_06830 aa22eff3f239710c964dd48fcac64afa 312 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 24 307 8.2E-122 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 C3497_06830 aa22eff3f239710c964dd48fcac64afa 312 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 17 312 47.795 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 C3497_12780 ea072fdb837a4ce738d1d30135e77390 183 SMART SM00855 2 144 5.9E-12 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3497_12780 ea072fdb837a4ce738d1d30135e77390 183 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 181 3.1E-33 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3497_12780 ea072fdb837a4ce738d1d30135e77390 183 SUPERFAMILY SSF53254 1 182 5.35E-37 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3497_12780 ea072fdb837a4ce738d1d30135e77390 183 PIRSF PIRSF000709 42 182 6.2E-4 T 14-10-2018 C3497_12780 ea072fdb837a4ce738d1d30135e77390 183 Gene3D G3DSA:3.40.50.1240 1 177 5.7E-33 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3497_00450 6bc66815acbf69ad6129301921426b6d 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 276 4.9E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_06450 3bd383f7fb028a1c2d4537d60b2844c6 593 Pfam PF03600 Citrate transporter 20 537 7.3E-54 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 C3497_06450 3bd383f7fb028a1c2d4537d60b2844c6 593 SUPERFAMILY SSF116726 220 291 3.27E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_06450 3bd383f7fb028a1c2d4537d60b2844c6 593 SUPERFAMILY SSF116726 308 384 1.18E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_06450 3bd383f7fb028a1c2d4537d60b2844c6 593 Gene3D G3DSA:3.30.70.1450 221 294 1.4E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_06450 3bd383f7fb028a1c2d4537d60b2844c6 593 Gene3D G3DSA:3.30.70.1450 310 384 1.0E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3497_06450 3bd383f7fb028a1c2d4537d60b2844c6 593 Pfam PF02080 TrkA-C domain 313 381 1.7E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 C3497_06450 3bd383f7fb028a1c2d4537d60b2844c6 593 Pfam PF02080 TrkA-C domain 224 290 2.2E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 C3497_03340 16c208a1376101cf07e4049719fda324 425 Gene3D G3DSA:3.90.760.10 357 424 1.3E-10 T 14-10-2018 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 C3497_03340 16c208a1376101cf07e4049719fda324 425 SUPERFAMILY SSF51905 154 281 5.61E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_03340 16c208a1376101cf07e4049719fda324 425 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 36 140 3.1E-11 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3497_03340 16c208a1376101cf07e4049719fda324 425 SUPERFAMILY SSF55424 357 424 1.87E-19 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3497_03340 16c208a1376101cf07e4049719fda324 425 SUPERFAMILY SSF51905 36 353 7.6E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_03340 16c208a1376101cf07e4049719fda324 425 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 358 424 1.8E-22 T 14-10-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 C3497_03340 16c208a1376101cf07e4049719fda324 425 Gene3D G3DSA:3.50.50.60 151 281 3.3E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_03340 16c208a1376101cf07e4049719fda324 425 Gene3D G3DSA:3.50.50.60 37 345 3.3E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_10745 2e3dda136f0f1e24b6762a954c36bc2e 189 Pfam PF00011 Hsp20/alpha crystallin family 85 188 7.5E-28 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain C3497_10745 2e3dda136f0f1e24b6762a954c36bc2e 189 Gene3D G3DSA:2.60.40.790 40 187 1.4E-39 T 14-10-2018 IPR008978 HSP20-like chaperone C3497_10745 2e3dda136f0f1e24b6762a954c36bc2e 189 SUPERFAMILY SSF49764 49 181 9.84E-40 T 14-10-2018 IPR008978 HSP20-like chaperone C3497_07155 a8d5cdd90e834c9d34a74e5c055749fc 243 Pfam PF00929 Exonuclease 4 165 5.1E-37 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3497_07155 a8d5cdd90e834c9d34a74e5c055749fc 243 SUPERFAMILY SSF53098 1 175 1.59E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_07155 a8d5cdd90e834c9d34a74e5c055749fc 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 212 1.6E-63 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_07155 a8d5cdd90e834c9d34a74e5c055749fc 243 Gene3D G3DSA:3.30.420.10 1 180 6.6E-56 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_07155 a8d5cdd90e834c9d34a74e5c055749fc 243 SMART SM00479 2 174 2.1E-51 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3497_07155 a8d5cdd90e834c9d34a74e5c055749fc 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 229 3.6E-90 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3497_07455 7e21403f744ced7781379ed83dc23308 527 Pfam PF01384 Phosphate transporter family 63 514 1.8E-106 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 C3497_09105 63ca46940e391776c595dbc87a725244 231 SUPERFAMILY SSF103473 4 229 1.7E-23 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_09105 63ca46940e391776c595dbc87a725244 231 Pfam PF07690 Major Facilitator Superfamily 8 226 1.6E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_09105 63ca46940e391776c595dbc87a725244 231 Gene3D G3DSA:1.20.1250.20 1 231 3.0E-22 T 14-10-2018 C3497_09105 63ca46940e391776c595dbc87a725244 231 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3497_03105 4815b142a14a77dd507b971dba8a1caa 208 Gene3D G3DSA:3.40.50.300 13 205 2.3E-37 T 14-10-2018 C3497_03105 4815b142a14a77dd507b971dba8a1caa 208 Pfam PF00005 ABC transporter 17 145 1.5E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_03105 4815b142a14a77dd507b971dba8a1caa 208 SUPERFAMILY SSF52540 15 203 3.27E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_03105 4815b142a14a77dd507b971dba8a1caa 208 SMART SM00382 23 194 9.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_03770 0b58bb17a743c1bec34bebd328e53516 130 SUPERFAMILY SSF54211 5 130 1.1E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3497_03770 0b58bb17a743c1bec34bebd328e53516 130 Gene3D G3DSA:3.30.230.10 1 130 1.5E-51 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3497_03770 0b58bb17a743c1bec34bebd328e53516 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 C3497_03770 0b58bb17a743c1bec34bebd328e53516 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 5.8E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 C3497_03770 0b58bb17a743c1bec34bebd328e53516 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.488 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid C3497_06325 7cadc62736936feead2608cfc87621d5 291 Pfam PF00582 Universal stress protein family 219 291 4.8E-10 T 14-10-2018 IPR006016 UspA C3497_06325 7cadc62736936feead2608cfc87621d5 291 Pfam PF00582 Universal stress protein family 10 164 5.7E-10 T 14-10-2018 IPR006016 UspA C3497_06325 7cadc62736936feead2608cfc87621d5 291 SUPERFAMILY SSF52402 171 291 2.6E-21 T 14-10-2018 C3497_06325 7cadc62736936feead2608cfc87621d5 291 SUPERFAMILY SSF52402 9 164 8.37E-18 T 14-10-2018 C3497_06325 7cadc62736936feead2608cfc87621d5 291 Gene3D G3DSA:3.40.50.12370 10 291 2.6E-65 T 14-10-2018 C3497_06325 7cadc62736936feead2608cfc87621d5 291 PRINTS PR01438 Universal stress protein signature 269 291 1.5E-7 T 14-10-2018 IPR006015 Universal stress protein A C3497_06325 7cadc62736936feead2608cfc87621d5 291 PRINTS PR01438 Universal stress protein signature 171 189 1.5E-7 T 14-10-2018 IPR006015 Universal stress protein A C3497_06325 7cadc62736936feead2608cfc87621d5 291 PRINTS PR01438 Universal stress protein signature 251 263 1.5E-7 T 14-10-2018 IPR006015 Universal stress protein A C3497_00120 0f4463ff9ec50174eff4116907dd92a3 313 Gene3D G3DSA:3.40.190.10 167 267 2.0E-94 T 14-10-2018 C3497_00120 0f4463ff9ec50174eff4116907dd92a3 313 Pfam PF03466 LysR substrate binding domain 89 293 3.8E-38 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_00120 0f4463ff9ec50174eff4116907dd92a3 313 SUPERFAMILY SSF46785 1 112 1.65E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_00120 0f4463ff9ec50174eff4116907dd92a3 313 Gene3D G3DSA:3.40.190.10 93 303 2.0E-94 T 14-10-2018 C3497_00120 0f4463ff9ec50174eff4116907dd92a3 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.8E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_00120 0f4463ff9ec50174eff4116907dd92a3 313 Gene3D G3DSA:1.10.10.10 1 86 2.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_00120 0f4463ff9ec50174eff4116907dd92a3 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_00120 0f4463ff9ec50174eff4116907dd92a3 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_00120 0f4463ff9ec50174eff4116907dd92a3 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_00120 0f4463ff9ec50174eff4116907dd92a3 313 SUPERFAMILY SSF53850 90 300 2.01E-39 T 14-10-2018 C3497_04365 d0e0ac6d8a3829397b600dac49b24c90 419 SMART SM00331 185 419 0.0011 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_04365 d0e0ac6d8a3829397b600dac49b24c90 419 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 212 419 2.0E-21 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_04365 d0e0ac6d8a3829397b600dac49b24c90 419 Gene3D G3DSA:3.10.580.10 31 155 3.2E-5 T 14-10-2018 C3497_04365 d0e0ac6d8a3829397b600dac49b24c90 419 Gene3D G3DSA:3.60.40.10 156 419 1.3E-51 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_13805 1d398203403c354c5b06b9eb64b0cd21 1256 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1250 0.0 T 14-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 C3497_13805 1d398203403c354c5b06b9eb64b0cd21 1256 Pfam PF02514 CobN/Magnesium Chelatase 138 1236 0.0 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 C3497_02470 c6e606a4f6eb1fcdaf42dc8d2f4af41e 69 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 8 53 1.4E-14 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 C3497_02470 c6e606a4f6eb1fcdaf42dc8d2f4af41e 69 Pfam PF12728 Helix-turn-helix domain 6 54 4.3E-14 T 14-10-2018 C3497_02470 c6e606a4f6eb1fcdaf42dc8d2f4af41e 69 SUPERFAMILY SSF46955 6 53 1.04E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3497_02470 c6e606a4f6eb1fcdaf42dc8d2f4af41e 69 Gene3D G3DSA:1.10.1660.10 3 56 1.4E-8 T 14-10-2018 C3497_02895 fd8d9fcbfcc886440abf118abe3fa85e 105 SUPERFAMILY SSF50022 1 104 1.7E-35 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3497_02895 fd8d9fcbfcc886440abf118abe3fa85e 105 Pfam PF13806 Rieske-like [2Fe-2S] domain 2 103 3.6E-20 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 C3497_02895 fd8d9fcbfcc886440abf118abe3fa85e 105 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 104 8.9E-31 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 C3497_02895 fd8d9fcbfcc886440abf118abe3fa85e 105 Gene3D G3DSA:2.102.10.10 1 105 5.3E-31 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3497_06740 c4ad24a4d8e63ea23a4321448be75b40 228 Pfam PF00814 Glycoprotease family 31 128 3.3E-23 T 14-10-2018 IPR000905 Gcp-like domain C3497_06740 c4ad24a4d8e63ea23a4321448be75b40 228 SUPERFAMILY SSF53067 1 101 2.37E-24 T 14-10-2018 C3497_06740 c4ad24a4d8e63ea23a4321448be75b40 228 SUPERFAMILY SSF53067 106 209 8.93E-18 T 14-10-2018 C3497_06740 c4ad24a4d8e63ea23a4321448be75b40 228 Gene3D G3DSA:3.30.420.40 94 180 2.2E-61 T 14-10-2018 C3497_06740 c4ad24a4d8e63ea23a4321448be75b40 228 Gene3D G3DSA:3.30.420.40 3 214 2.2E-61 T 14-10-2018 C3497_06740 c4ad24a4d8e63ea23a4321448be75b40 228 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 211 1.2E-52 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 Gene3D G3DSA:1.10.287.80 6 285 4.8E-101 T 14-10-2018 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 SUPERFAMILY SSF52943 3 289 4.51E-91 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 Gene3D G3DSA:3.40.1380.10 62 208 4.8E-101 T 14-10-2018 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 Pfam PF00231 ATP synthase 5 288 8.4E-92 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 2.3E-101 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 1.9E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 1.9E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 PRINTS PR00126 ATP synthase gamma subunit signature 169 186 1.9E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 1.9E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13275 66a793e3bbbf27fb08d15718b9d9a750 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 35.429 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_12190 197364d8288099e3ec39df4ad59e348a 344 Gene3D G3DSA:3.20.20.140 2 344 9.9E-110 T 14-10-2018 C3497_12190 197364d8288099e3ec39df4ad59e348a 344 PIRSF PIRSF001237 1 344 4.4E-141 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_12190 197364d8288099e3ec39df4ad59e348a 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_12190 197364d8288099e3ec39df4ad59e348a 344 SUPERFAMILY SSF51556 1 343 3.01E-145 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3497_12190 197364d8288099e3ec39df4ad59e348a 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_12190 197364d8288099e3ec39df4ad59e348a 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 343 1.8E-142 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_12190 197364d8288099e3ec39df4ad59e348a 344 Pfam PF01979 Amidohydrolase family 11 309 6.8E-20 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C3497_12190 197364d8288099e3ec39df4ad59e348a 344 Hamap MF_00219 Dihydroorotase [pyrC]. 2 344 48.287 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_03695 f0c69f9c8fbaa4d5846d275a1944f325 427 SUPERFAMILY SSF109604 172 303 5.93E-10 T 14-10-2018 C3497_03695 f0c69f9c8fbaa4d5846d275a1944f325 427 Pfam PF13487 HD domain 220 279 1.7E-15 T 14-10-2018 C3497_03695 f0c69f9c8fbaa4d5846d275a1944f325 427 Gene3D G3DSA:1.10.3210.10 168 339 3.7E-23 T 14-10-2018 C3497_13860 d7b005dddf23264ab3953fc9976dab98 263 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_13860 d7b005dddf23264ab3953fc9976dab98 263 Gene3D G3DSA:3.40.1010.10 1 110 3.4E-26 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3497_13860 d7b005dddf23264ab3953fc9976dab98 263 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 248 4.4E-94 T 14-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 C3497_13860 d7b005dddf23264ab3953fc9976dab98 263 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 1.3E-41 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3497_13860 d7b005dddf23264ab3953fc9976dab98 263 SUPERFAMILY SSF53790 2 247 3.53E-62 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3497_13860 d7b005dddf23264ab3953fc9976dab98 263 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_13860 d7b005dddf23264ab3953fc9976dab98 263 Gene3D G3DSA:3.30.950.10 111 230 2.0E-42 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3497_02065 5367f2a662fc2b15d88eab23fb9dc386 129 SUPERFAMILY SSF53800 4 118 4.06E-32 T 14-10-2018 C3497_02065 5367f2a662fc2b15d88eab23fb9dc386 129 Gene3D G3DSA:3.40.50.1400 1 120 3.3E-31 T 14-10-2018 C3497_02065 5367f2a662fc2b15d88eab23fb9dc386 129 Pfam PF01903 CbiX 12 115 6.9E-27 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 C3497_10380 1eaa26322732acdf753eb690539c99e7 354 Pfam PF13692 Glycosyl transferases group 1 185 295 7.6E-11 T 14-10-2018 C3497_10380 1eaa26322732acdf753eb690539c99e7 354 Gene3D G3DSA:3.40.50.2000 164 335 6.1E-21 T 14-10-2018 C3497_10380 1eaa26322732acdf753eb690539c99e7 354 SUPERFAMILY SSF53756 19 351 2.51E-36 T 14-10-2018 C3497_10380 1eaa26322732acdf753eb690539c99e7 354 Gene3D G3DSA:3.40.50.2000 1 160 3.0E-8 T 14-10-2018 C3497_10380 1eaa26322732acdf753eb690539c99e7 354 Pfam PF13439 Glycosyltransferase Family 4 35 157 8.4E-8 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_05235 f7a399534a6f6e935ce6c708b5881aff 139 Pfam PF13279 Thioesterase-like superfamily 15 131 4.7E-14 T 14-10-2018 C3497_05235 f7a399534a6f6e935ce6c708b5881aff 139 Gene3D G3DSA:3.10.129.10 8 137 1.2E-37 T 14-10-2018 C3497_05235 f7a399534a6f6e935ce6c708b5881aff 139 SUPERFAMILY SSF54637 8 136 1.07E-36 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_02675 3a5a9ded911ab50c91f101dbbc019f09 336 SUPERFAMILY SSF52540 2 241 1.86E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02675 3a5a9ded911ab50c91f101dbbc019f09 336 SMART SM00382 30 219 3.3E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_02675 3a5a9ded911ab50c91f101dbbc019f09 336 Pfam PF00005 ABC transporter 22 170 4.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_02675 3a5a9ded911ab50c91f101dbbc019f09 336 Gene3D G3DSA:3.30.70.260 248 336 8.7E-16 T 14-10-2018 C3497_02675 3a5a9ded911ab50c91f101dbbc019f09 336 Gene3D G3DSA:3.40.50.300 1 247 4.3E-76 T 14-10-2018 C3497_02675 3a5a9ded911ab50c91f101dbbc019f09 336 Pfam PF09383 NIL domain 263 333 8.5E-19 T 14-10-2018 IPR018449 NIL domain C3497_02675 3a5a9ded911ab50c91f101dbbc019f09 336 SMART SM00930 261 334 1.1E-24 T 14-10-2018 IPR018449 NIL domain C3497_02675 3a5a9ded911ab50c91f101dbbc019f09 336 SUPERFAMILY SSF55021 261 334 4.81E-16 T 14-10-2018 C3497_02675 3a5a9ded911ab50c91f101dbbc019f09 336 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_00135 4f9fedc7e94dfe9b36514fabbb63e7fc 602 SMART SM00382 383 569 7.7E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00135 4f9fedc7e94dfe9b36514fabbb63e7fc 602 Gene3D G3DSA:1.20.1560.10 29 347 2.3E-114 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3497_00135 4f9fedc7e94dfe9b36514fabbb63e7fc 602 SUPERFAMILY SSF90123 26 336 1.83E-63 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3497_00135 4f9fedc7e94dfe9b36514fabbb63e7fc 602 Pfam PF00005 ABC transporter 374 523 7.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_00135 4f9fedc7e94dfe9b36514fabbb63e7fc 602 SUPERFAMILY SSF52540 349 593 4.24E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00135 4f9fedc7e94dfe9b36514fabbb63e7fc 602 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_00135 4f9fedc7e94dfe9b36514fabbb63e7fc 602 Gene3D G3DSA:3.40.50.300 353 602 6.7E-97 T 14-10-2018 C3497_00135 4f9fedc7e94dfe9b36514fabbb63e7fc 602 Pfam PF00664 ABC transporter transmembrane region 37 311 1.1E-40 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C3497_05665 7f6573d152106e5620e2c8f23f2aaf48 199 Gene3D G3DSA:3.40.50.360 1 197 4.1E-60 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3497_05665 7f6573d152106e5620e2c8f23f2aaf48 199 Pfam PF03358 NADPH-dependent FMN reductase 4 141 3.3E-6 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 C3497_05665 7f6573d152106e5620e2c8f23f2aaf48 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 195 6.0E-50 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 C3497_05665 7f6573d152106e5620e2c8f23f2aaf48 199 SUPERFAMILY SSF52218 1 195 1.36E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3497_13045 b557b774f7de8598d0c1d55fa3b687cd 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 170 1.1E-55 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 C3497_13045 b557b774f7de8598d0c1d55fa3b687cd 177 Pfam PF08534 Redoxin 35 159 1.0E-17 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 C3497_13045 b557b774f7de8598d0c1d55fa3b687cd 177 Gene3D G3DSA:3.40.30.10 22 175 1.3E-42 T 14-10-2018 C3497_13045 b557b774f7de8598d0c1d55fa3b687cd 177 SUPERFAMILY SSF52833 8 167 7.27E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_13045 b557b774f7de8598d0c1d55fa3b687cd 177 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3497_11300 1406c90556549f3684b831490797848d 225 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 8 223 36.479 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 C3497_11300 1406c90556549f3684b831490797848d 225 SUPERFAMILY SSF56784 9 222 6.17E-57 T 14-10-2018 IPR036412 HAD-like superfamily C3497_11300 1406c90556549f3684b831490797848d 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 193 4.4E-36 T 14-10-2018 C3497_11300 1406c90556549f3684b831490797848d 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 186 2.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3497_11300 1406c90556549f3684b831490797848d 225 Gene3D G3DSA:3.40.50.1000 11 198 2.7E-59 T 14-10-2018 IPR023214 HAD superfamily C3497_11300 1406c90556549f3684b831490797848d 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 69 193 7.4E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3497_11300 1406c90556549f3684b831490797848d 225 Gene3D G3DSA:1.10.150.240 23 92 2.7E-59 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C3497_11300 1406c90556549f3684b831490797848d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 3.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3497_11300 1406c90556549f3684b831490797848d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 3.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3497_11300 1406c90556549f3684b831490797848d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 3.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3497_11300 1406c90556549f3684b831490797848d 225 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 220 2.4E-65 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 C3497_03710 d522f78ca91a6e7a72bffcb3574d5913 379 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 8.2E-127 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 C3497_03710 d522f78ca91a6e7a72bffcb3574d5913 379 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 7.7E-127 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 C3497_03710 d522f78ca91a6e7a72bffcb3574d5913 379 SUPERFAMILY SSF160544 250 355 6.41E-41 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal C3497_03710 d522f78ca91a6e7a72bffcb3574d5913 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 2.8E-42 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 C3497_03710 d522f78ca91a6e7a72bffcb3574d5913 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 2.8E-42 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 C3497_03710 d522f78ca91a6e7a72bffcb3574d5913 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 2.8E-42 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 C3497_03710 d522f78ca91a6e7a72bffcb3574d5913 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 2.8E-42 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 C3497_03710 d522f78ca91a6e7a72bffcb3574d5913 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 2.8E-42 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 C3497_03710 d522f78ca91a6e7a72bffcb3574d5913 379 Gene3D G3DSA:3.40.1690.10 217 358 1.4E-59 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal C3497_09370 592fcbe4cd01a4d2cbe1b3e664b458fb 146 Pfam PF04316 Anti-sigma-28 factor, FlgM 79 133 5.4E-16 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal C3497_09370 592fcbe4cd01a4d2cbe1b3e664b458fb 146 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 67 135 1.4E-22 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 C3497_09370 592fcbe4cd01a4d2cbe1b3e664b458fb 146 SUPERFAMILY SSF101498 70 135 8.76E-15 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily C3497_01130 62d94c32aae1744816e21ad07fb94274 306 SMART SM00849 20 205 2.4E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_01130 62d94c32aae1744816e21ad07fb94274 306 Pfam PF00753 Metallo-beta-lactamase superfamily 16 205 2.8E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_01130 62d94c32aae1744816e21ad07fb94274 306 Gene3D G3DSA:3.60.15.10 11 228 1.3E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_01130 62d94c32aae1744816e21ad07fb94274 306 SUPERFAMILY SSF56281 16 226 9.38E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_01130 62d94c32aae1744816e21ad07fb94274 306 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 63 83 - T 14-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 C3497_03025 7bb195994ecfa42f7e6e4fca0b5b84ec 228 Gene3D G3DSA:3.40.50.2300 1 121 9.5E-39 T 14-10-2018 C3497_03025 7bb195994ecfa42f7e6e4fca0b5b84ec 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 4.5E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_03025 7bb195994ecfa42f7e6e4fca0b5b84ec 228 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_03025 7bb195994ecfa42f7e6e4fca0b5b84ec 228 SMART SM00862 144 217 2.4E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_03025 7bb195994ecfa42f7e6e4fca0b5b84ec 228 SMART SM00448 1 112 6.6E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_03025 7bb195994ecfa42f7e6e4fca0b5b84ec 228 SUPERFAMILY SSF52172 1 123 8.82E-39 T 14-10-2018 IPR011006 CheY-like superfamily C3497_03025 7bb195994ecfa42f7e6e4fca0b5b84ec 228 SUPERFAMILY SSF46894 118 218 4.25E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_03025 7bb195994ecfa42f7e6e4fca0b5b84ec 228 Gene3D G3DSA:1.10.10.10 122 225 2.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_04675 ad90c04d4c95d3b79962cd8d51990c1f 405 Pfam PF07690 Major Facilitator Superfamily 20 331 1.9E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3497_04675 ad90c04d4c95d3b79962cd8d51990c1f 405 Gene3D G3DSA:1.20.1250.20 12 397 6.6E-43 T 14-10-2018 C3497_04675 ad90c04d4c95d3b79962cd8d51990c1f 405 SUPERFAMILY SSF103473 9 393 8.5E-52 T 14-10-2018 IPR036259 MFS transporter superfamily C3497_04390 7fa941ec139ec9a9989a23a2f995ee23 124 Gene3D G3DSA:1.20.58.1610 1 124 4.2E-40 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04390 7fa941ec139ec9a9989a23a2f995ee23 124 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 124 18.961 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 C3497_04390 7fa941ec139ec9a9989a23a2f995ee23 124 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 123 3.4E-35 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_00500 4b3a69084212525e719c4e4b62daf2c0 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3497_00500 4b3a69084212525e719c4e4b62daf2c0 616 Pfam PF00920 Dehydratase family 34 607 1.4E-223 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3497_00500 4b3a69084212525e719c4e4b62daf2c0 616 SUPERFAMILY SSF143975 4 420 1.14E-137 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3497_00500 4b3a69084212525e719c4e4b62daf2c0 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.742 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3497_00500 4b3a69084212525e719c4e4b62daf2c0 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3497_00500 4b3a69084212525e719c4e4b62daf2c0 616 Gene3D G3DSA:3.50.30.80 421 572 1.0E-55 T 14-10-2018 C3497_00500 4b3a69084212525e719c4e4b62daf2c0 616 SUPERFAMILY SSF52016 421 612 3.14E-61 T 14-10-2018 C3497_00500 4b3a69084212525e719c4e4b62daf2c0 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 3.5E-258 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 Gene3D G3DSA:3.30.479.20 155 274 3.3E-35 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 Pfam PF00889 Elongation factor TS 73 275 1.2E-66 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 SUPERFAMILY SSF46934 3 56 6.94E-14 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 SUPERFAMILY SSF54713 56 147 1.83E-23 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 SUPERFAMILY SSF54713 151 292 1.7E-44 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 Hamap MF_00050 Elongation factor Ts [tsf]. 1 292 75.04 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 Gene3D G3DSA:1.10.286.20 192 238 3.3E-35 T 14-10-2018 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 292 6.5E-89 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 Gene3D G3DSA:3.30.479.20 57 149 2.4E-27 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3497_07370 06853c7c46e414c3a0713d45a6546bb1 297 Gene3D G3DSA:1.10.8.10 1 56 2.5E-21 T 14-10-2018 C3497_07260 9f8ed2fae981928ddffad4950846ad30 1183 SUPERFAMILY SSF103088 1001 1058 6.93E-5 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_07260 9f8ed2fae981928ddffad4950846ad30 1183 Pfam PF05359 Domain of Unknown Function (DUF748) 153 297 4.6E-25 T 14-10-2018 IPR008023 Protein of unknown function DUF748 C3497_07260 9f8ed2fae981928ddffad4950846ad30 1183 Pfam PF05359 Domain of Unknown Function (DUF748) 373 509 1.8E-14 T 14-10-2018 IPR008023 Protein of unknown function DUF748 C3497_07260 9f8ed2fae981928ddffad4950846ad30 1183 Pfam PF05359 Domain of Unknown Function (DUF748) 790 935 1.0E-32 T 14-10-2018 IPR008023 Protein of unknown function DUF748 C3497_07260 9f8ed2fae981928ddffad4950846ad30 1183 Pfam PF05359 Domain of Unknown Function (DUF748) 575 728 6.6E-30 T 14-10-2018 IPR008023 Protein of unknown function DUF748 C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 Gene3D G3DSA:3.10.580.10 189 342 2.7E-39 T 14-10-2018 C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 SUPERFAMILY SSF54631 196 330 6.49E-29 T 14-10-2018 C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 SMART SM00116 280 328 0.0072 T 14-10-2018 IPR000644 CBS domain C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 SMART SM00116 216 265 30.0 T 14-10-2018 IPR000644 CBS domain C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 SUPERFAMILY SSF56176 343 422 8.72E-17 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 SMART SM01091 343 421 5.1E-16 T 14-10-2018 IPR005170 Transporter-associated domain C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 Pfam PF01595 Domain of unknown function DUF21 13 184 2.5E-38 T 14-10-2018 IPR002550 CNNM, transmembrane domain C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 Pfam PF03471 Transporter associated domain 346 418 1.8E-13 T 14-10-2018 IPR005170 Transporter-associated domain C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 Gene3D G3DSA:3.30.465.10 343 419 2.8E-21 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 Pfam PF00571 CBS domain 277 327 1.4E-7 T 14-10-2018 IPR000644 CBS domain C3497_10270 432da9e98de9496b409cfdf31bd55ac1 435 Pfam PF00571 CBS domain 207 264 5.1E-5 T 14-10-2018 IPR000644 CBS domain C3497_09645 e86e54c21097f1a1e5f5decb378a2825 365 Gene3D G3DSA:3.40.50.2000 183 347 1.3E-145 T 14-10-2018 C3497_09645 e86e54c21097f1a1e5f5decb378a2825 365 SUPERFAMILY SSF53756 1 364 8.17E-136 T 14-10-2018 C3497_09645 e86e54c21097f1a1e5f5decb378a2825 365 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 360 1.5E-122 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 C3497_09645 e86e54c21097f1a1e5f5decb378a2825 365 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 363 6.3E-144 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 C3497_09645 e86e54c21097f1a1e5f5decb378a2825 365 Gene3D G3DSA:3.40.50.2000 3 357 1.3E-145 T 14-10-2018 C3497_05105 3cf445ccbff33b277b17b7aca9d87b95 930 Gene3D G3DSA:3.40.50.300 728 917 2.4E-13 T 14-10-2018 C3497_05105 3cf445ccbff33b277b17b7aca9d87b95 930 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 903 7.6E-16 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal C3497_05105 3cf445ccbff33b277b17b7aca9d87b95 930 Gene3D G3DSA:3.40.50.300 2 292 8.9E-22 T 14-10-2018 C3497_05105 3cf445ccbff33b277b17b7aca9d87b95 930 SUPERFAMILY SSF52540 3 900 1.05E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01300 ab0cda4b33d46a9c12ae8f3a8e98790b 359 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 312 6.3E-84 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 C3497_01300 ab0cda4b33d46a9c12ae8f3a8e98790b 359 Gene3D G3DSA:1.20.1420.30 35 310 3.5E-91 T 14-10-2018 C3497_01300 ab0cda4b33d46a9c12ae8f3a8e98790b 359 Pfam PF01699 Sodium/calcium exchanger protein 175 316 8.1E-30 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 C3497_01300 ab0cda4b33d46a9c12ae8f3a8e98790b 359 Pfam PF01699 Sodium/calcium exchanger protein 5 144 2.3E-28 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 C3497_01300 ab0cda4b33d46a9c12ae8f3a8e98790b 359 Gene3D G3DSA:1.20.58.1130 9 206 3.5E-91 T 14-10-2018 C3497_00460 17b63d0367929a5c79ac889f1deb1095 207 Pfam PF03458 UPF0126 domain 97 168 2.5E-22 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 C3497_00460 17b63d0367929a5c79ac889f1deb1095 207 Pfam PF03458 UPF0126 domain 14 84 1.8E-15 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 C3497_02285 7f0c044c9a9826a6c86f7aa11e60775e 251 Gene3D G3DSA:1.10.3900.10 10 177 2.6E-86 T 14-10-2018 C3497_02285 7f0c044c9a9826a6c86f7aa11e60775e 251 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 249 34.307 T 14-10-2018 IPR009777 Cell division protein ZapD C3497_02285 7f0c044c9a9826a6c86f7aa11e60775e 251 Gene3D G3DSA:2.60.440.10 4 249 2.6E-86 T 14-10-2018 IPR027462 Z ring-associated protein D, C-terminal C3497_02285 7f0c044c9a9826a6c86f7aa11e60775e 251 Pfam PF07072 Cell division protein 16 225 7.1E-81 T 14-10-2018 IPR009777 Cell division protein ZapD C3497_02285 7f0c044c9a9826a6c86f7aa11e60775e 251 SUPERFAMILY SSF160950 2 249 1.24E-87 T 14-10-2018 IPR036268 ZapD domain superfamily C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 457 9.0E-121 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 SUPERFAMILY SSF53927 221 527 8.42E-129 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 Gene3D G3DSA:3.40.140.20 218 371 2.3E-59 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 PIRSF PIRSF000414 1 527 9.3E-218 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 SMART SM00851 15 130 1.7E-62 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 Gene3D G3DSA:3.40.50.1380 1 202 1.2E-83 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 Pfam PF02142 MGS-like domain 15 129 9.5E-30 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 SUPERFAMILY SSF52335 4 199 8.55E-69 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 Gene3D G3DSA:3.40.140.20 392 527 1.5E-58 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 SMART SM00798 135 459 4.2E-210 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 527 5.9E-224 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_11915 70b1a62b8616b9d91b504e8c1007d504 527 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 527 44.789 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3497_06465 79f7b770cbff4cfcebb9850e4ba63f84 248 Gene3D G3DSA:3.40.50.1820 1 247 3.4E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_06465 79f7b770cbff4cfcebb9850e4ba63f84 248 SUPERFAMILY SSF53474 3 246 1.99E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_06465 79f7b770cbff4cfcebb9850e4ba63f84 248 Pfam PF12697 Alpha/beta hydrolase family 5 240 2.1E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_04620 421a50bb04b8060128a0b7c148775d21 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 642 5.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04620 421a50bb04b8060128a0b7c148775d21 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 5.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04620 421a50bb04b8060128a0b7c148775d21 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 5.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04620 421a50bb04b8060128a0b7c148775d21 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 680 5.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_04620 421a50bb04b8060128a0b7c148775d21 708 Pfam PF13185 GAF domain 321 452 8.8E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 C3497_04620 421a50bb04b8060128a0b7c148775d21 708 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 11 680 3.3E-261 T 14-10-2018 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative C3497_04620 421a50bb04b8060128a0b7c148775d21 708 SUPERFAMILY SSF55781 322 467 7.01E-10 T 14-10-2018 C3497_04620 421a50bb04b8060128a0b7c148775d21 708 SUPERFAMILY SSF47384 468 536 8.83E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_04620 421a50bb04b8060128a0b7c148775d21 708 SMART SM00387 575 683 2.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_04620 421a50bb04b8060128a0b7c148775d21 708 SUPERFAMILY SSF55874 539 681 2.23E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_04620 421a50bb04b8060128a0b7c148775d21 708 Gene3D G3DSA:3.30.450.40 306 470 9.0E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_04620 421a50bb04b8060128a0b7c148775d21 708 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 578 681 1.0E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_04620 421a50bb04b8060128a0b7c148775d21 708 Gene3D G3DSA:3.30.565.10 536 680 4.6E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_04620 421a50bb04b8060128a0b7c148775d21 708 Gene3D G3DSA:1.10.287.130 478 535 4.6E-33 T 14-10-2018 C3497_00740 b1f12d980e855d147c4bc80edc3d5f01 526 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 237 263 2.0E-16 T 14-10-2018 C3497_00740 b1f12d980e855d147c4bc80edc3d5f01 526 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 149 170 2.0E-16 T 14-10-2018 C3497_00740 b1f12d980e855d147c4bc80edc3d5f01 526 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 74 99 2.0E-16 T 14-10-2018 C3497_00740 b1f12d980e855d147c4bc80edc3d5f01 526 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 304 316 2.0E-16 T 14-10-2018 C3497_00740 b1f12d980e855d147c4bc80edc3d5f01 526 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 215 236 2.0E-16 T 14-10-2018 C3497_00740 b1f12d980e855d147c4bc80edc3d5f01 526 Pfam PF00361 Proton-conducting membrane transporter 125 346 6.0E-39 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_12970 0f172c9adcff60176c554ed3c54bce13 99 SUPERFAMILY SSF141371 7 81 1.49E-5 T 14-10-2018 C3497_05630 72ba7eb6c53b88d5d2090ac463b747d4 202 Gene3D G3DSA:3.40.50.2020 14 196 5.2E-47 T 14-10-2018 C3497_05630 72ba7eb6c53b88d5d2090ac463b747d4 202 Pfam PF00156 Phosphoribosyl transferase domain 42 170 6.1E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3497_05630 72ba7eb6c53b88d5d2090ac463b747d4 202 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 13 196 5.7E-50 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 C3497_05630 72ba7eb6c53b88d5d2090ac463b747d4 202 SUPERFAMILY SSF53271 14 194 3.15E-36 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3497_06670 209ae420e8694a6f4422418acf535c1e 249 Pfam PF01012 Electron transfer flavoprotein domain 28 206 2.7E-46 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C3497_06670 209ae420e8694a6f4422418acf535c1e 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 C3497_06670 209ae420e8694a6f4422418acf535c1e 249 SUPERFAMILY SSF52402 1 244 8.37E-85 T 14-10-2018 C3497_06670 209ae420e8694a6f4422418acf535c1e 249 SMART SM00893 23 211 3.1E-70 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C3497_06670 209ae420e8694a6f4422418acf535c1e 249 Gene3D G3DSA:3.40.50.620 1 248 5.1E-89 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_06670 209ae420e8694a6f4422418acf535c1e 249 PIRSF PIRSF000090 1 249 2.3E-86 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 C3497_05550 b9b852f3e7287c0717fa1116df1874fd 251 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 244 5.0E-88 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C3497_05550 b9b852f3e7287c0717fa1116df1874fd 251 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 248 116.236 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C3497_05550 b9b852f3e7287c0717fa1116df1874fd 251 SUPERFAMILY SSF63892 2 245 7.98E-88 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C3497_05550 b9b852f3e7287c0717fa1116df1874fd 251 Gene3D G3DSA:3.20.20.70 1 250 9.6E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_05550 b9b852f3e7287c0717fa1116df1874fd 251 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 243 2.1E-93 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C3497_11785 6a66a19cfd900a60239578d3ad6d6a44 327 Pfam PF05598 Transposase domain (DUF772) 50 124 7.4E-22 T 14-10-2018 IPR008490 Transposase InsH, N-terminal C3497_11785 6a66a19cfd900a60239578d3ad6d6a44 327 Pfam PF01609 Transposase DDE domain 137 311 1.1E-28 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 Pfam PF01063 Amino-transferase class IV 387 587 7.5E-34 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 PRINTS PR00095 Anthranilate synthase component I signature 222 235 4.9E-12 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 PRINTS PR00095 Anthranilate synthase component I signature 315 329 4.9E-12 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 PRINTS PR00095 Anthranilate synthase component I signature 236 249 4.9E-12 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 PRINTS PR00095 Anthranilate synthase component I signature 330 344 4.9E-12 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 59 377 1.7E-106 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 Gene3D G3DSA:3.60.120.10 14 376 2.4E-108 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 Gene3D G3DSA:3.30.470.10 377 458 1.4E-18 T 14-10-2018 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 SUPERFAMILY SSF56322 28 381 1.03E-100 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 SUPERFAMILY SSF56752 329 586 2.49E-44 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 Gene3D G3DSA:3.20.10.10 463 589 1.8E-34 T 14-10-2018 C3497_07240 79d5b92d1bfc997eef62fbc24c8c15f0 589 Pfam PF00425 chorismate binding enzyme 130 374 5.3E-80 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal C3497_13965 a5a8cdf1b55b366a0ce48e2e4012e242 216 PIRSF PIRSF000005 12 216 2.6E-31 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 C3497_13965 a5a8cdf1b55b366a0ce48e2e4012e242 216 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 137 212 2.5E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_13965 a5a8cdf1b55b366a0ce48e2e4012e242 216 Gene3D G3DSA:1.10.760.10 53 126 3.6E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_13965 a5a8cdf1b55b366a0ce48e2e4012e242 216 Gene3D G3DSA:1.10.760.10 135 215 1.7E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_13965 a5a8cdf1b55b366a0ce48e2e4012e242 216 SUPERFAMILY SSF46626 132 214 8.29E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_13965 a5a8cdf1b55b366a0ce48e2e4012e242 216 SUPERFAMILY SSF46626 50 121 2.02E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_05770 8bb15f43d3fdee47a974dcc1fda6a014 285 SUPERFAMILY SSF118352 224 280 8.63E-10 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 C3497_05770 8bb15f43d3fdee47a974dcc1fda6a014 285 SUPERFAMILY SSF64397 7 225 1.15E-59 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 C3497_05770 8bb15f43d3fdee47a974dcc1fda6a014 285 PIRSF PIRSF005261 1 281 7.5E-70 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 C3497_05770 8bb15f43d3fdee47a974dcc1fda6a014 285 Gene3D G3DSA:3.90.1280.10 231 281 6.3E-7 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 C3497_05770 8bb15f43d3fdee47a974dcc1fda6a014 285 Pfam PF01430 Hsp33 protein 8 271 3.6E-70 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 C3497_05770 8bb15f43d3fdee47a974dcc1fda6a014 285 Gene3D G3DSA:1.10.287.480 175 224 7.2E-15 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily C3497_05770 8bb15f43d3fdee47a974dcc1fda6a014 285 Gene3D G3DSA:3.55.30.10 2 173 2.1E-53 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 C3497_06395 1a637eeb46a5ec15285af16447efc578 544 Pfam PF08668 HDOD domain 31 191 1.0E-6 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_06395 1a637eeb46a5ec15285af16447efc578 544 SUPERFAMILY SSF109604 31 229 1.22E-11 T 14-10-2018 C3497_06395 1a637eeb46a5ec15285af16447efc578 544 Gene3D G3DSA:1.10.3210.10 27 241 2.5E-12 T 14-10-2018 C3497_04450 af7831a9219df6970b2b8f3f6cf31a71 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 4.2E-49 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04450 af7831a9219df6970b2b8f3f6cf31a71 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 138 157 4.2E-49 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04450 af7831a9219df6970b2b8f3f6cf31a71 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 4.2E-49 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04450 af7831a9219df6970b2b8f3f6cf31a71 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 4.2E-49 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04450 af7831a9219df6970b2b8f3f6cf31a71 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 4.2E-49 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04450 af7831a9219df6970b2b8f3f6cf31a71 493 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 487 5.5E-195 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04450 af7831a9219df6970b2b8f3f6cf31a71 493 Pfam PF00361 Proton-conducting membrane transporter 134 418 1.3E-79 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_05620 f29eca90367099469d01d5a0d82fe6c4 375 Gene3D G3DSA:1.10.3210.10 160 368 5.3E-59 T 14-10-2018 C3497_05620 f29eca90367099469d01d5a0d82fe6c4 375 Pfam PF13487 HD domain 237 307 1.1E-14 T 14-10-2018 C3497_05620 f29eca90367099469d01d5a0d82fe6c4 375 SUPERFAMILY SSF109604 168 354 9.11E-31 T 14-10-2018 C3497_08970 77ad5862f672a2995dedfa4147934c7e 121 Gene3D G3DSA:1.10.760.10 13 111 1.6E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08970 77ad5862f672a2995dedfa4147934c7e 121 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 43 107 1.8E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_08970 77ad5862f672a2995dedfa4147934c7e 121 SUPERFAMILY SSF46626 6 107 1.43E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_14030 6cd4e23251f98aaba57053226d3d6a51 242 SMART SM00382 26 213 1.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_14030 6cd4e23251f98aaba57053226d3d6a51 242 Gene3D G3DSA:3.40.50.300 1 242 1.6E-80 T 14-10-2018 C3497_14030 6cd4e23251f98aaba57053226d3d6a51 242 PIRSF PIRSF039085 1 241 1.8E-108 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 C3497_14030 6cd4e23251f98aaba57053226d3d6a51 242 SUPERFAMILY SSF52540 1 235 3.8E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_14030 6cd4e23251f98aaba57053226d3d6a51 242 Pfam PF00005 ABC transporter 17 165 9.5E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_14030 6cd4e23251f98aaba57053226d3d6a51 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_05715 6113664491d3f38c352f12497020f801 147 Pfam PF00571 CBS domain 73 125 1.9E-11 T 14-10-2018 IPR000644 CBS domain C3497_05715 6113664491d3f38c352f12497020f801 147 Pfam PF00571 CBS domain 15 61 8.8E-10 T 14-10-2018 IPR000644 CBS domain C3497_05715 6113664491d3f38c352f12497020f801 147 SMART SM00116 80 127 5.0E-9 T 14-10-2018 IPR000644 CBS domain C3497_05715 6113664491d3f38c352f12497020f801 147 SMART SM00116 15 62 7.6E-8 T 14-10-2018 IPR000644 CBS domain C3497_05715 6113664491d3f38c352f12497020f801 147 SUPERFAMILY SSF54631 4 141 5.81E-34 T 14-10-2018 C3497_05715 6113664491d3f38c352f12497020f801 147 Gene3D G3DSA:3.10.580.10 1 143 2.0E-47 T 14-10-2018 C3497_13175 67e8dca6676d12649e8c127a5bd589da 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 193 1.8E-51 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 C3497_13175 67e8dca6676d12649e8c127a5bd589da 198 SUPERFAMILY SSF52972 3 194 2.28E-69 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3497_13175 67e8dca6676d12649e8c127a5bd589da 198 Hamap MF_01405 dITP/XTP pyrophosphatase. 3 195 47.44 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 C3497_13175 67e8dca6676d12649e8c127a5bd589da 198 Pfam PF01725 Ham1 family 5 191 5.9E-53 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 C3497_13175 67e8dca6676d12649e8c127a5bd589da 198 Gene3D G3DSA:3.90.950.10 1 197 3.5E-72 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3497_12805 0736fa2c4c1027c8cc963861b0c90865 348 Gene3D G3DSA:3.40.50.2000 2 158 1.1E-36 T 14-10-2018 C3497_12805 0736fa2c4c1027c8cc963861b0c90865 348 Gene3D G3DSA:3.40.50.2000 169 345 4.7E-39 T 14-10-2018 C3497_12805 0736fa2c4c1027c8cc963861b0c90865 348 SUPERFAMILY SSF53756 3 342 2.42E-79 T 14-10-2018 C3497_12805 0736fa2c4c1027c8cc963861b0c90865 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 80 319 4.3E-37 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C3497_02640 1f456bc638a55ba62b7bc79d53274481 105 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 3 100 2.3E-42 T 14-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 C3497_02640 1f456bc638a55ba62b7bc79d53274481 105 PIRSF PIRSF019302 1 105 8.1E-45 T 14-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 C3497_09135 72c96f4a9435841ff20f2dafe1c88fcb 492 SMART SM00267 320 491 1.9E-58 T 14-10-2018 IPR000160 GGDEF domain C3497_09135 72c96f4a9435841ff20f2dafe1c88fcb 492 SUPERFAMILY SSF55073 336 489 2.2E-46 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_09135 72c96f4a9435841ff20f2dafe1c88fcb 492 Gene3D G3DSA:3.30.70.270 316 490 2.5E-53 T 14-10-2018 C3497_09135 72c96f4a9435841ff20f2dafe1c88fcb 492 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 487 1.3E-41 T 14-10-2018 IPR000160 GGDEF domain C3497_09135 72c96f4a9435841ff20f2dafe1c88fcb 492 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 332 490 1.0E-45 T 14-10-2018 IPR000160 GGDEF domain C3497_09130 7a811f9cdd5dcc94db7c54ea036a53ba 215 Gene3D G3DSA:3.40.50.12740 7 214 2.6E-68 T 14-10-2018 C3497_09130 7a811f9cdd5dcc94db7c54ea036a53ba 215 SUPERFAMILY SSF52172 7 138 4.98E-38 T 14-10-2018 IPR011006 CheY-like superfamily C3497_09130 7a811f9cdd5dcc94db7c54ea036a53ba 215 SMART SM00448 7 120 6.7E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_09130 7a811f9cdd5dcc94db7c54ea036a53ba 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 6.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_09130 7a811f9cdd5dcc94db7c54ea036a53ba 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 6.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_09130 7a811f9cdd5dcc94db7c54ea036a53ba 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 6.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_09130 7a811f9cdd5dcc94db7c54ea036a53ba 215 Pfam PF00072 Response regulator receiver domain 9 121 2.0E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_09130 7a811f9cdd5dcc94db7c54ea036a53ba 215 SMART SM00421 151 208 2.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_09130 7a811f9cdd5dcc94db7c54ea036a53ba 215 SUPERFAMILY SSF46894 145 214 3.74E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_09130 7a811f9cdd5dcc94db7c54ea036a53ba 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 6.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_12725 d2042050d2762c7e8aee7268576b9725 198 SUPERFAMILY SSF55846 12 184 2.75E-62 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C3497_12725 d2042050d2762c7e8aee7268576b9725 198 SMART SM00644 24 172 4.3E-43 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C3497_12725 d2042050d2762c7e8aee7268576b9725 198 Gene3D G3DSA:3.40.80.10 10 189 1.9E-53 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C3497_12725 d2042050d2762c7e8aee7268576b9725 198 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 36 173 1.6E-23 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C3497_14505 2252558c189cf99bc2d1a2c83b53f828 540 Pfam PF00672 HAMP domain 211 258 7.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_14505 2252558c189cf99bc2d1a2c83b53f828 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 506 2.8E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_14505 2252558c189cf99bc2d1a2c83b53f828 540 SMART SM00304 209 263 3.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_14505 2252558c189cf99bc2d1a2c83b53f828 540 Gene3D G3DSA:1.10.287.950 209 540 2.1E-70 T 14-10-2018 C3497_14505 2252558c189cf99bc2d1a2c83b53f828 540 SMART SM00283 278 539 3.8E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_14505 2252558c189cf99bc2d1a2c83b53f828 540 SUPERFAMILY SSF58104 231 540 3.27E-66 T 14-10-2018 C3497_05995 25379ba59a17a9f7045a4e1311d32f70 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 88 2.0E-16 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_05995 25379ba59a17a9f7045a4e1311d32f70 88 Gene3D G3DSA:1.20.58.110 1 87 3.5E-26 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_05995 25379ba59a17a9f7045a4e1311d32f70 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.808 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_05995 25379ba59a17a9f7045a4e1311d32f70 88 Pfam PF01649 Ribosomal protein S20 2 84 9.2E-25 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_05995 25379ba59a17a9f7045a4e1311d32f70 88 SUPERFAMILY SSF46992 3 86 6.02E-28 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_05995 25379ba59a17a9f7045a4e1311d32f70 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 4.1E-25 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_13665 f242218a216320abbf62895f46b93de1 161 Gene3D G3DSA:3.40.930.10 1 151 3.5E-55 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 C3497_13665 f242218a216320abbf62895f46b93de1 161 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain C3497_13665 f242218a216320abbf62895f46b93de1 161 SUPERFAMILY SSF55804 4 149 1.44E-44 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 C3497_13665 f242218a216320abbf62895f46b93de1 161 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 5 147 1.5E-44 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 C3497_13665 f242218a216320abbf62895f46b93de1 161 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 148 2.1E-36 T 14-10-2018 IPR002178 PTS EIIA type-2 domain C3497_01340 3ebd89fcf99e4d52b261b522d348eea2 156 SUPERFAMILY SSF46785 82 142 1.97E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_01340 3ebd89fcf99e4d52b261b522d348eea2 156 Gene3D G3DSA:1.10.10.10 51 134 4.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_10490 4470bae05fda9989f871bc275c2b6593 516 Pfam PF02706 Chain length determinant protein 10 92 3.1E-6 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 C3497_10490 4470bae05fda9989f871bc275c2b6593 516 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 11 509 7.3E-182 T 14-10-2018 IPR014345 PEP-CTERM locus polysaccharide chain length determinant C3497_10490 4470bae05fda9989f871bc275c2b6593 516 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 448 2.4E-11 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain C3497_12455 ed4ab40ff2837471304e500e34363b40 193 SUPERFAMILY SSF53474 2 189 2.11E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_12455 ed4ab40ff2837471304e500e34363b40 193 Gene3D G3DSA:3.40.50.1820 1 193 2.2E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_12455 ed4ab40ff2837471304e500e34363b40 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 190 4.5E-55 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA C3497_12670 a860556d66690143050784d2ecf4e0f3 177 PIRSF PIRSF019239 16 177 8.7E-44 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 C3497_12670 a860556d66690143050784d2ecf4e0f3 177 Pfam PF01899 Na+/H+ ion antiporter subunit 27 175 7.8E-43 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 C3497_10285 b40ca00d5aea37d408d7781b5bfbd7f3 283 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 122 3.2E-34 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal C3497_10285 b40ca00d5aea37d408d7781b5bfbd7f3 283 Pfam PF01478 Type IV leader peptidase family 132 240 6.8E-28 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 C3497_10285 b40ca00d5aea37d408d7781b5bfbd7f3 283 Gene3D G3DSA:1.20.120.1220 123 262 4.8E-5 T 14-10-2018 C3497_10285 b40ca00d5aea37d408d7781b5bfbd7f3 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 209 220 1.2E-28 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C3497_10285 b40ca00d5aea37d408d7781b5bfbd7f3 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 221 236 1.2E-28 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C3497_10285 b40ca00d5aea37d408d7781b5bfbd7f3 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 198 208 1.2E-28 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C3497_10285 b40ca00d5aea37d408d7781b5bfbd7f3 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 141 158 1.2E-28 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C3497_09735 1401d438a290a9eb41b31eec55038ef0 83 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 63 5.8E-13 T 14-10-2018 IPR022789 Antitoxin ParD C3497_09735 1401d438a290a9eb41b31eec55038ef0 83 Gene3D G3DSA:1.10.1220.10 8 39 5.8E-7 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 C3497_09735 1401d438a290a9eb41b31eec55038ef0 83 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 71 1.7E-4 T 14-10-2018 IPR022789 Antitoxin ParD C3497_09735 1401d438a290a9eb41b31eec55038ef0 83 SUPERFAMILY SSF47598 1 43 5.45E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C3497_03625 0e2e29afd103e4706d5a40efbb263d54 253 Gene3D G3DSA:3.40.50.720 1 249 4.3E-91 T 14-10-2018 C3497_03625 0e2e29afd103e4706d5a40efbb263d54 253 SUPERFAMILY SSF69572 2 250 1.83E-84 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 C3497_03625 0e2e29afd103e4706d5a40efbb263d54 253 Pfam PF00899 ThiF family 9 243 2.9E-62 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 C3497_02830 4794ccd07a0c2743ea9cc75cedf37f97 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 5.4E-22 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 C3497_02370 c12bdfb286c82587f9352e0485efff42 385 Hamap MF_01917 Cardiolipin synthase B [clsB]. 1 385 48.111 T 14-10-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 C3497_02370 c12bdfb286c82587f9352e0485efff42 385 Gene3D G3DSA:3.30.870.10 4 191 1.3E-38 T 14-10-2018 C3497_02370 c12bdfb286c82587f9352e0485efff42 385 SMART SM00155 107 134 1.6E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C3497_02370 c12bdfb286c82587f9352e0485efff42 385 SMART SM00155 287 314 0.8 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C3497_02370 c12bdfb286c82587f9352e0485efff42 385 SUPERFAMILY SSF56024 182 357 1.3E-38 T 14-10-2018 C3497_02370 c12bdfb286c82587f9352e0485efff42 385 SUPERFAMILY SSF56024 4 170 1.88E-41 T 14-10-2018 C3497_02370 c12bdfb286c82587f9352e0485efff42 385 Pfam PF13091 PLD-like domain 216 335 6.5E-22 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3497_02370 c12bdfb286c82587f9352e0485efff42 385 Pfam PF13091 PLD-like domain 23 130 3.0E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3497_02370 c12bdfb286c82587f9352e0485efff42 385 Gene3D G3DSA:3.30.870.10 193 343 4.0E-25 T 14-10-2018 C3497_13115 565f66d78ad70655d8e50701acb54737 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 7.1E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_13115 565f66d78ad70655d8e50701acb54737 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 2.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_13115 565f66d78ad70655d8e50701acb54737 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 2.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_13115 565f66d78ad70655d8e50701acb54737 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 2.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_13115 565f66d78ad70655d8e50701acb54737 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_13115 565f66d78ad70655d8e50701acb54737 217 SMART SM00421 152 209 1.0E-26 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_13115 565f66d78ad70655d8e50701acb54737 217 SUPERFAMILY SSF52172 7 135 1.18E-32 T 14-10-2018 IPR011006 CheY-like superfamily C3497_13115 565f66d78ad70655d8e50701acb54737 217 SMART SM00448 6 119 4.2E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_13115 565f66d78ad70655d8e50701acb54737 217 Gene3D G3DSA:3.40.50.12740 7 214 9.2E-65 T 14-10-2018 C3497_13115 565f66d78ad70655d8e50701acb54737 217 SUPERFAMILY SSF46894 144 212 4.42E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_13115 565f66d78ad70655d8e50701acb54737 217 Pfam PF00072 Response regulator receiver domain 8 120 4.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_07860 358805f085677f75eafb0a180f5ba955 381 SUPERFAMILY SSF53822 52 343 1.51E-17 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_07860 358805f085677f75eafb0a180f5ba955 381 Gene3D G3DSA:3.40.50.2300 149 260 2.2E-8 T 14-10-2018 C3497_07860 358805f085677f75eafb0a180f5ba955 381 Gene3D G3DSA:3.40.50.2300 56 315 2.2E-8 T 14-10-2018 C3497_01995 275412898b8b027789b12afff9aaf7bc 135 Pfam PF01196 Ribosomal protein L17 20 115 2.3E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01995 275412898b8b027789b12afff9aaf7bc 135 Gene3D G3DSA:3.90.1030.10 1 116 4.6E-47 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01995 275412898b8b027789b12afff9aaf7bc 135 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01995 275412898b8b027789b12afff9aaf7bc 135 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 3.2E-45 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01995 275412898b8b027789b12afff9aaf7bc 135 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.763 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01995 275412898b8b027789b12afff9aaf7bc 135 SUPERFAMILY SSF64263 1 119 1.31E-49 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_09435 9aaaf4de2a42b3b3eb60f5d4c89e3e92 645 Gene3D G3DSA:3.10.620.30 334 481 2.4E-19 T 14-10-2018 C3497_09435 9aaaf4de2a42b3b3eb60f5d4c89e3e92 645 Pfam PF01841 Transglutaminase-like superfamily 347 463 1.1E-24 T 14-10-2018 IPR002931 Transglutaminase-like C3497_09435 9aaaf4de2a42b3b3eb60f5d4c89e3e92 645 Pfam PF13559 Domain of unknown function (DUF4129) 573 640 4.7E-8 T 14-10-2018 IPR025403 Domain of unknown function DUF4129 C3497_09435 9aaaf4de2a42b3b3eb60f5d4c89e3e92 645 SMART SM00460 394 465 2.6E-27 T 14-10-2018 IPR002931 Transglutaminase-like C3497_09435 9aaaf4de2a42b3b3eb60f5d4c89e3e92 645 Pfam PF11992 Domain of unknown function (DUF3488) 9 318 5.0E-102 T 14-10-2018 IPR021878 Protein of unknown function DUF3488 C3497_09435 9aaaf4de2a42b3b3eb60f5d4c89e3e92 645 SUPERFAMILY SSF54001 268 591 1.68E-63 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily C3497_08560 1936e440c9895e9af035c580fa3fc4d1 408 Pfam PF01610 Transposase 155 389 3.4E-65 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C3497_08560 1936e440c9895e9af035c580fa3fc4d1 408 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 5.2E-11 T 14-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain C3497_13215 6ed7d2340c8394e99cc56e3dfae45396 140 Pfam PF01230 HIT domain 10 96 3.1E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3497_13215 6ed7d2340c8394e99cc56e3dfae45396 140 PIRSF PIRSF000714 1 138 6.9E-42 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type C3497_13215 6ed7d2340c8394e99cc56e3dfae45396 140 Gene3D G3DSA:3.30.428.10 6 139 3.8E-38 T 14-10-2018 IPR036265 HIT-like superfamily C3497_13215 6ed7d2340c8394e99cc56e3dfae45396 140 SUPERFAMILY SSF54197 1 135 4.08E-34 T 14-10-2018 IPR036265 HIT-like superfamily C3497_11150 4bc81fa7c959a9efacb7a978a3357016 79 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 79 3.5E-30 T 14-10-2018 IPR021676 Protein of unknown function DUF3262 C3497_11150 4bc81fa7c959a9efacb7a978a3357016 79 Pfam PF11660 Protein of unknown function (DUF3262) 4 78 8.0E-25 T 14-10-2018 IPR021676 Protein of unknown function DUF3262 C3497_11440 afae2677f70f7d4c2e096f7a17422a7e 85 SUPERFAMILY SSF82657 1 81 4.71E-25 T 14-10-2018 IPR036065 BolA-like superfamily C3497_11440 afae2677f70f7d4c2e096f7a17422a7e 85 Gene3D G3DSA:3.30.300.90 2 75 1.8E-26 T 14-10-2018 C3497_11440 afae2677f70f7d4c2e096f7a17422a7e 85 Pfam PF01722 BolA-like protein 24 74 1.4E-15 T 14-10-2018 IPR002634 BolA protein C3497_11440 afae2677f70f7d4c2e096f7a17422a7e 85 PIRSF PIRSF003113 1 84 1.4E-21 T 14-10-2018 IPR002634 BolA protein C3497_07405 e8ef83d1fd7cfc8921d7aa76587e5cc5 365 Gene3D G3DSA:2.40.370.10 39 224 8.7E-66 T 14-10-2018 IPR023374 AttH-like domain superfamily C3497_07405 e8ef83d1fd7cfc8921d7aa76587e5cc5 365 Pfam PF17186 Lipocalin-like domain 226 359 3.5E-39 T 14-10-2018 C3497_07405 e8ef83d1fd7cfc8921d7aa76587e5cc5 365 Gene3D G3DSA:2.40.370.10 226 365 8.6E-45 T 14-10-2018 IPR023374 AttH-like domain superfamily C3497_07405 e8ef83d1fd7cfc8921d7aa76587e5cc5 365 SUPERFAMILY SSF159245 28 359 5.75E-103 T 14-10-2018 C3497_07405 e8ef83d1fd7cfc8921d7aa76587e5cc5 365 Pfam PF07143 CrtC N-terminal lipocalin domain 51 221 3.4E-52 T 14-10-2018 IPR010791 AttH domain C3497_10515 bf506f731f6f0feacc1794398005002e 256 PIRSF PIRSF028205 6 256 8.2E-78 T 14-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 C3497_10515 bf506f731f6f0feacc1794398005002e 256 Gene3D G3DSA:2.50.20.10 29 255 4.3E-60 T 14-10-2018 C3497_10515 bf506f731f6f0feacc1794398005002e 256 Pfam PF17131 Outer membrane lipoprotein-sorting protein 79 254 4.2E-46 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein C3497_07245 d4a133493b7b665dac2a521261b5c5cf 858 Gene3D G3DSA:3.20.20.450 608 853 1.0E-73 T 14-10-2018 IPR035919 EAL domain superfamily C3497_07245 d4a133493b7b665dac2a521261b5c5cf 858 SUPERFAMILY SSF141868 617 846 2.35E-69 T 14-10-2018 IPR035919 EAL domain superfamily C3497_07245 d4a133493b7b665dac2a521261b5c5cf 858 Pfam PF00990 Diguanylate cyclase, GGDEF domain 434 593 1.0E-46 T 14-10-2018 IPR000160 GGDEF domain C3497_07245 d4a133493b7b665dac2a521261b5c5cf 858 Pfam PF00563 EAL domain 616 844 1.0E-64 T 14-10-2018 IPR001633 EAL domain C3497_07245 d4a133493b7b665dac2a521261b5c5cf 858 SMART SM00052 608 849 1.1E-65 T 14-10-2018 IPR001633 EAL domain C3497_07245 d4a133493b7b665dac2a521261b5c5cf 858 SMART SM00267 423 597 3.8E-61 T 14-10-2018 IPR000160 GGDEF domain C3497_07245 d4a133493b7b665dac2a521261b5c5cf 858 Gene3D G3DSA:3.30.70.270 420 597 6.4E-55 T 14-10-2018 C3497_07245 d4a133493b7b665dac2a521261b5c5cf 858 SUPERFAMILY SSF55073 439 596 5.73E-48 T 14-10-2018 IPR029787 Nucleotide cyclase C3497_07245 d4a133493b7b665dac2a521261b5c5cf 858 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 430 596 1.5E-52 T 14-10-2018 IPR000160 GGDEF domain C3497_11125 3770ee07e02c3cbf1d9a9d26c7808903 386 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 25 334 2.2E-38 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_11125 3770ee07e02c3cbf1d9a9d26c7808903 386 PIRSF PIRSF029347 1 371 1.3E-51 T 14-10-2018 IPR014555 RecF-like C3497_11125 3770ee07e02c3cbf1d9a9d26c7808903 386 SUPERFAMILY SSF52540 1 375 6.34E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11125 3770ee07e02c3cbf1d9a9d26c7808903 386 Gene3D G3DSA:3.40.50.300 205 367 7.0E-11 T 14-10-2018 C3497_00110 9f5a08c2e17637b882cc7ce8fff0332e 179 PIRSF PIRSF030820 1 178 8.5E-50 T 14-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 C3497_00110 9f5a08c2e17637b882cc7ce8fff0332e 179 Pfam PF06073 Bacterial protein of unknown function (DUF934) 60 170 2.1E-37 T 14-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 C3497_01185 d8f309266ce12e55a24936b753c6130b 155 SUPERFAMILY SSF48695 33 149 9.91E-5 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily C3497_01185 d8f309266ce12e55a24936b753c6130b 155 Pfam PF09626 Dihaem cytochrome c 34 153 6.3E-41 T 14-10-2018 IPR018588 Dihaem cytochrome c C3497_09785 81f3b66e2eda82637cda493035ca53dc 159 Gene3D G3DSA:1.10.10.2830 76 155 9.6E-7 T 14-10-2018 C3497_09785 81f3b66e2eda82637cda493035ca53dc 159 SUPERFAMILY SSF109709 76 134 3.79E-7 T 14-10-2018 C3497_02920 604f6e9236bec274d8ce1e13ff71938f 276 Pfam PF00881 Nitroreductase family 33 186 2.4E-20 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 C3497_02920 604f6e9236bec274d8ce1e13ff71938f 276 SUPERFAMILY SSF55469 25 275 7.25E-62 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3497_02920 604f6e9236bec274d8ce1e13ff71938f 276 PIRSF PIRSF005426 23 276 1.2E-80 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 C3497_02920 604f6e9236bec274d8ce1e13ff71938f 276 Gene3D G3DSA:3.40.109.10 25 276 8.0E-64 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3497_13235 8d53020f611c696c4082a87c31121d91 140 Gene3D G3DSA:3.30.2020.30 5 102 1.0E-28 T 14-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 C3497_13235 8d53020f611c696c4082a87c31121d91 140 Pfam PF06155 Protein of unknown function (DUF971) 14 98 4.2E-31 T 14-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 C3497_00540 343d0f39e2f4debc9b903f0d629655aa 421 Pfam PF02687 FtsX-like permease family 319 412 1.3E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3497_00540 343d0f39e2f4debc9b903f0d629655aa 421 Pfam PF12704 MacB-like periplasmic core domain 21 208 3.5E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain C3497_11270 dda4de4b937aee898e3804c7eab9864b 205 Pfam PF08722 TnsA endonuclease N terminal 46 118 1.3E-13 T 14-10-2018 IPR014833 TnsA endonuclease, N-terminal C3497_03780 b0efbc17aaa2059b6d68c10b30e1d1bf 116 Gene3D G3DSA:2.60.300.12 10 116 2.1E-35 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3497_03780 b0efbc17aaa2059b6d68c10b30e1d1bf 116 SUPERFAMILY SSF89360 11 105 1.28E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3497_03780 b0efbc17aaa2059b6d68c10b30e1d1bf 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 37.513 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 C3497_03780 b0efbc17aaa2059b6d68c10b30e1d1bf 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 111 5.7E-21 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C3497_03780 b0efbc17aaa2059b6d68c10b30e1d1bf 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 C3497_03780 b0efbc17aaa2059b6d68c10b30e1d1bf 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 116 1.7E-39 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 C3497_02120 a6514ac9b7efb31468111caa942421e4 297 SUPERFAMILY SSF51735 2 292 4.72E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_02120 a6514ac9b7efb31468111caa942421e4 297 Pfam PF13460 NAD(P)H-binding 9 201 5.8E-8 T 14-10-2018 IPR016040 NAD(P)-binding domain C3497_02120 a6514ac9b7efb31468111caa942421e4 297 Gene3D G3DSA:3.40.50.720 1 293 6.0E-67 T 14-10-2018 C3497_05560 6a8db50412fe6edb88a0bf6471d7ffb4 370 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 15 295 6.7E-71 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 C3497_05560 6a8db50412fe6edb88a0bf6471d7ffb4 370 Gene3D G3DSA:3.20.20.300 3 346 2.4E-109 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 C3497_05560 6a8db50412fe6edb88a0bf6471d7ffb4 370 SUPERFAMILY SSF51445 10 301 2.74E-79 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C3497_05560 6a8db50412fe6edb88a0bf6471d7ffb4 370 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 12 349 51.089 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 C3497_06045 f8b14378f9ab704cc857ed2a88775400 124 SUPERFAMILY SSF49764 15 123 4.53E-25 T 14-10-2018 IPR008978 HSP20-like chaperone C3497_06045 f8b14378f9ab704cc857ed2a88775400 124 Gene3D G3DSA:2.60.40.790 1 123 1.8E-23 T 14-10-2018 IPR008978 HSP20-like chaperone C3497_06045 f8b14378f9ab704cc857ed2a88775400 124 Pfam PF00011 Hsp20/alpha crystallin family 23 121 2.2E-14 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain C3497_12665 0c23e5cde58c0abd3dfc140fe45269aa 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 32 82 5.9E-20 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 C3497_12665 0c23e5cde58c0abd3dfc140fe45269aa 89 PIRSF PIRSF028784 1 89 1.9E-26 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 C3497_08050 15e0155a5dd189ca9fae4dfce72d72bd 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 14-10-2018 IPR001455 TusA-like domain C3497_08050 15e0155a5dd189ca9fae4dfce72d72bd 76 SUPERFAMILY SSF64307 3 75 1.57E-22 T 14-10-2018 IPR036868 TusA-like domain superfamily C3497_08050 15e0155a5dd189ca9fae4dfce72d72bd 76 Gene3D G3DSA:3.30.110.40 1 76 7.4E-28 T 14-10-2018 IPR036868 TusA-like domain superfamily C3497_08050 15e0155a5dd189ca9fae4dfce72d72bd 76 Pfam PF01206 Sulfurtransferase TusA 6 75 1.9E-22 T 14-10-2018 IPR001455 TusA-like domain C3497_06280 36d06d0fc5c629f133f34cf9c4983c4d 328 SUPERFAMILY SSF101478 21 305 9.29E-57 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily C3497_06280 36d06d0fc5c629f133f34cf9c4983c4d 328 Gene3D G3DSA:1.10.4080.10 13 309 3.2E-82 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily C3497_06280 36d06d0fc5c629f133f34cf9c4983c4d 328 TIGRFAM TIGR02662 dinitro_DRAG: ADP-ribosyl-[dinitrogen reductase] hydrolase 23 308 1.3E-101 T 14-10-2018 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase C3497_06280 36d06d0fc5c629f133f34cf9c4983c4d 328 Pfam PF03747 ADP-ribosylglycohydrolase 27 283 2.1E-46 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 C3497_08385 7a448117097ff1c9ca35a96369063a2e 635 Gene3D G3DSA:3.30.2010.10 99 191 3.5E-31 T 14-10-2018 C3497_08385 7a448117097ff1c9ca35a96369063a2e 635 SUPERFAMILY SSF158682 566 624 4.58E-5 T 14-10-2018 IPR029024 TerB-like C3497_08385 7a448117097ff1c9ca35a96369063a2e 635 Pfam PF01435 Peptidase family M48 109 319 2.6E-30 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3497_02385 ce0a83bca12a1b7ca992535b145aef07 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 53 6.8E-11 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA C3497_07460 04e3dddb0864bbbd465b2aaae8a10f3e 120 Pfam PF12643 MazG-like family 38 118 2.5E-13 T 14-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 C3497_07460 04e3dddb0864bbbd465b2aaae8a10f3e 120 PIRSF PIRSF029826 1 118 6.0E-45 T 14-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 C3497_07460 04e3dddb0864bbbd465b2aaae8a10f3e 120 SUPERFAMILY SSF101386 7 117 1.55E-36 T 14-10-2018 C3497_07460 04e3dddb0864bbbd465b2aaae8a10f3e 120 Gene3D G3DSA:1.10.287.1080 1 109 2.0E-36 T 14-10-2018 C3497_03325 7d42a95456dffec01dd9f8d65ab3bbf6 400 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 389 2.2E-131 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 C3497_03325 7d42a95456dffec01dd9f8d65ab3bbf6 400 Gene3D G3DSA:3.40.50.1950 1 184 4.7E-59 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 C3497_03325 7d42a95456dffec01dd9f8d65ab3bbf6 400 SUPERFAMILY SSF102645 184 393 1.44E-71 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 C3497_03325 7d42a95456dffec01dd9f8d65ab3bbf6 400 Pfam PF02441 Flavoprotein 8 178 2.9E-43 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 C3497_03325 7d42a95456dffec01dd9f8d65ab3bbf6 400 SUPERFAMILY SSF52507 1 181 1.03E-60 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 C3497_03325 7d42a95456dffec01dd9f8d65ab3bbf6 400 Gene3D G3DSA:3.40.50.10300 185 396 2.6E-71 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 C3497_03325 7d42a95456dffec01dd9f8d65ab3bbf6 400 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 364 1.7E-64 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 C3497_01105 efd90278defc5dc7e21a0b20247f9f31 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 C3497_01105 efd90278defc5dc7e21a0b20247f9f31 262 SUPERFAMILY SSF52096 1 259 1.51E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_01105 efd90278defc5dc7e21a0b20247f9f31 262 Gene3D G3DSA:1.10.12.10 203 262 1.2E-19 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal C3497_01105 efd90278defc5dc7e21a0b20247f9f31 262 Gene3D G3DSA:3.90.226.10 1 200 2.5E-64 T 14-10-2018 C3497_01105 efd90278defc5dc7e21a0b20247f9f31 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 258 2.8E-55 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3497_11610 81099aa66d380d0d72fbe9f0748822ee 328 SUPERFAMILY SSF53098 177 307 6.53E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_11610 81099aa66d380d0d72fbe9f0748822ee 328 Pfam PF13683 Integrase core domain 236 297 1.8E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3497_13865 d920f593e49d9225c89cc1277aff9818 254 TIGRFAM TIGR02434 CobF: precorrin-6A synthase (deacetylating) 6 251 2.1E-98 T 14-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 C3497_13865 d920f593e49d9225c89cc1277aff9818 254 PIRSF PIRSF036525 4 254 3.7E-102 T 14-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 C3497_13865 d920f593e49d9225c89cc1277aff9818 254 Gene3D G3DSA:3.30.950.10 144 254 1.5E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3497_13865 d920f593e49d9225c89cc1277aff9818 254 SUPERFAMILY SSF53790 7 252 3.93E-37 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3497_13865 d920f593e49d9225c89cc1277aff9818 254 Gene3D G3DSA:3.40.1010.10 4 143 1.4E-42 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3497_13865 d920f593e49d9225c89cc1277aff9818 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 225 4.5E-34 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 PRINTS PR00046 Major sigma-70 factor signature 76 89 2.7E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 PRINTS PR00046 Major sigma-70 factor signature 229 241 2.7E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 PRINTS PR00046 Major sigma-70 factor signature 264 275 2.7E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 PRINTS PR00046 Major sigma-70 factor signature 249 264 2.7E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 13 280 1.4E-123 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 PIRSF PIRSF000770 3 283 3.0E-35 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 Pfam PF04545 Sigma-70, region 4 225 276 4.9E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 249 275 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 Pfam PF04542 Sigma-70 region 2 52 121 1.0E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 76 89 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 Gene3D G3DSA:1.10.601.10 12 124 1.9E-29 T 14-10-2018 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 SUPERFAMILY SSF88659 188 280 2.62E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 Gene3D G3DSA:1.10.10.10 204 280 9.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 Pfam PF00140 Sigma-70 factor, region 1.2 14 42 1.0E-6 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 SUPERFAMILY SSF88946 13 121 5.23E-41 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 281 50.681 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3497_01465 2b7e6217567336a6c406c0a13f3e3ad5 283 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 278 8.1E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C3497_00935 1e31d587ba97e93f6b217118e70e29ab 298 Pfam PF01136 Peptidase family U32 91 235 2.1E-11 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 C3497_07820 f784762ba75fdebe1758e9a89f8c4593 216 SMART SM00448 9 121 2.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_07820 f784762ba75fdebe1758e9a89f8c4593 216 Pfam PF00072 Response regulator receiver domain 11 121 2.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_07820 f784762ba75fdebe1758e9a89f8c4593 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.6E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_07820 f784762ba75fdebe1758e9a89f8c4593 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.6E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_07820 f784762ba75fdebe1758e9a89f8c4593 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.6E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_07820 f784762ba75fdebe1758e9a89f8c4593 216 SUPERFAMILY SSF46894 146 215 1.29E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_07820 f784762ba75fdebe1758e9a89f8c4593 216 Gene3D G3DSA:3.40.50.12740 10 214 5.5E-56 T 14-10-2018 C3497_07820 f784762ba75fdebe1758e9a89f8c4593 216 SUPERFAMILY SSF52172 7 136 4.27E-33 T 14-10-2018 IPR011006 CheY-like superfamily C3497_07820 f784762ba75fdebe1758e9a89f8c4593 216 SMART SM00421 151 208 2.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_07820 f784762ba75fdebe1758e9a89f8c4593 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3497_07140 1782e7eb897d8a79d3cc5e2cec6d0e83 70 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 2.5E-12 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM C3497_02080 7c9c4b17ad4266135443db3f44e39a34 74 Pfam PF11127 Protein of unknown function (DUF2892) 4 63 1.0E-14 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 C3497_04750 8d01ec48aaf5630fc0b2a82cb9923a93 362 SUPERFAMILY SSF55469 3 80 3.27E-10 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3497_04750 8d01ec48aaf5630fc0b2a82cb9923a93 362 Gene3D G3DSA:3.40.109.10 102 356 7.6E-25 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3497_04750 8d01ec48aaf5630fc0b2a82cb9923a93 362 Pfam PF00881 Nitroreductase family 3 35 3.8E-6 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 C3497_04750 8d01ec48aaf5630fc0b2a82cb9923a93 362 Gene3D G3DSA:3.40.109.10 1 99 5.8E-16 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3497_04880 7ad3798f301508b4d0baae25e718df82 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site C3497_04880 7ad3798f301508b4d0baae25e718df82 322 Gene3D G3DSA:1.10.600.10 1 322 1.1E-111 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3497_04880 7ad3798f301508b4d0baae25e718df82 322 Pfam PF00348 Polyprenyl synthetase 32 262 7.5E-74 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 C3497_04880 7ad3798f301508b4d0baae25e718df82 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site C3497_04880 7ad3798f301508b4d0baae25e718df82 322 SUPERFAMILY SSF48576 4 321 5.76E-99 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3497_02680 406c2b8ced8b08af1e7bbfca8413fef2 238 SMART SM00382 26 213 5.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_02680 406c2b8ced8b08af1e7bbfca8413fef2 238 Pfam PF00005 ABC transporter 17 161 5.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_02680 406c2b8ced8b08af1e7bbfca8413fef2 238 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_02680 406c2b8ced8b08af1e7bbfca8413fef2 238 Gene3D G3DSA:3.40.50.300 1 235 1.2E-64 T 14-10-2018 C3497_02680 406c2b8ced8b08af1e7bbfca8413fef2 238 SUPERFAMILY SSF52540 2 232 6.32E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02680 406c2b8ced8b08af1e7bbfca8413fef2 238 PIRSF PIRSF039137 1 235 7.3E-105 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 C3497_03510 0143d73b4252d7298709431bdb447b23 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 7 217 3.9E-73 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 C3497_03510 0143d73b4252d7298709431bdb447b23 241 PIRSF PIRSF003107 2 223 2.1E-66 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 C3497_03510 0143d73b4252d7298709431bdb447b23 241 Gene3D G3DSA:1.20.58.220 1 115 2.4E-39 T 14-10-2018 IPR038078 PhoU-like domain superfamily C3497_03510 0143d73b4252d7298709431bdb447b23 241 Pfam PF01895 PhoU domain 129 209 2.0E-18 T 14-10-2018 IPR026022 PhoU domain C3497_03510 0143d73b4252d7298709431bdb447b23 241 Pfam PF01895 PhoU domain 21 107 2.7E-20 T 14-10-2018 IPR026022 PhoU domain C3497_03510 0143d73b4252d7298709431bdb447b23 241 SUPERFAMILY SSF109755 6 226 2.72E-71 T 14-10-2018 C3497_03510 0143d73b4252d7298709431bdb447b23 241 Gene3D G3DSA:1.20.58.220 116 233 8.3E-35 T 14-10-2018 IPR038078 PhoU-like domain superfamily C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 274 287 4.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 251 269 4.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 24 40 4.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 4.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 65 83 4.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 86 96 4.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 325 340 4.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 Gene3D G3DSA:3.40.50.2300 31 341 3.9E-105 T 14-10-2018 C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 Gene3D G3DSA:3.40.50.2300 141 269 3.9E-105 T 14-10-2018 C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 SUPERFAMILY SSF53822 24 362 1.24E-90 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_02700 f37e99ae0956ed81bd8872e2b9007ae9 364 Pfam PF13458 Periplasmic binding protein 26 359 4.2E-63 T 14-10-2018 IPR028081 Leucine-binding protein domain C3497_12845 c9c50fdc8eff06c1a8c62173d4590355 441 Pfam PF00294 pfkB family carbohydrate kinase 13 302 2.3E-43 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB C3497_12845 c9c50fdc8eff06c1a8c62173d4590355 441 SUPERFAMILY SSF53613 12 310 5.3E-56 T 14-10-2018 IPR029056 Ribokinase-like C3497_12845 c9c50fdc8eff06c1a8c62173d4590355 441 Gene3D G3DSA:3.40.1190.20 4 309 1.2E-106 T 14-10-2018 IPR029056 Ribokinase-like C3497_12845 c9c50fdc8eff06c1a8c62173d4590355 441 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 2.1E-118 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 C3497_10405 0e39c5613bc07e3a965ca7fa6f808e9c 320 SUPERFAMILY SSF53448 14 240 2.04E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_10405 0e39c5613bc07e3a965ca7fa6f808e9c 320 Gene3D G3DSA:3.90.550.10 9 254 1.0E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_10405 0e39c5613bc07e3a965ca7fa6f808e9c 320 Pfam PF00535 Glycosyl transferase family 2 17 125 8.7E-32 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3497_03380 fb0253d5333215a0559f9631b9b3fe18 620 Gene3D G3DSA:1.20.1730.10 22 334 4.6E-36 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily C3497_03380 fb0253d5333215a0559f9631b9b3fe18 620 Gene3D G3DSA:1.20.1730.10 384 588 2.6E-23 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily C3497_03380 fb0253d5333215a0559f9631b9b3fe18 620 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 608 1.5E-248 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily C3497_03380 fb0253d5333215a0559f9631b9b3fe18 620 Pfam PF00474 Sodium:solute symporter family 414 532 1.5E-15 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 C3497_03380 fb0253d5333215a0559f9631b9b3fe18 620 Pfam PF00474 Sodium:solute symporter family 33 303 2.0E-35 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 C3497_00590 8c6bdfc306c0c23e06d57503bfd159c2 160 Hamap MF_00476 Nickel-responsive regulator [nikR]. 1 132 27.328 T 14-10-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 C3497_00590 8c6bdfc306c0c23e06d57503bfd159c2 160 SUPERFAMILY SSF55021 51 132 6.18E-27 T 14-10-2018 C3497_00590 8c6bdfc306c0c23e06d57503bfd159c2 160 Gene3D G3DSA:3.30.70.1150 50 134 2.2E-33 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal C3497_00590 8c6bdfc306c0c23e06d57503bfd159c2 160 Pfam PF08753 NikR C terminal nickel binding domain 54 130 3.5E-31 T 14-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal C3497_00590 8c6bdfc306c0c23e06d57503bfd159c2 160 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 41 2.9E-10 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 C3497_00590 8c6bdfc306c0c23e06d57503bfd159c2 160 SUPERFAMILY SSF47598 1 43 1.56E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C3497_00590 8c6bdfc306c0c23e06d57503bfd159c2 160 Gene3D G3DSA:1.10.1220.10 1 49 1.4E-19 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 C3497_14210 fb1f1333d794e358972522bec2140d74 164 Pfam PF11142 Protein of unknown function (DUF2917) 38 94 4.6E-13 T 14-10-2018 IPR021317 Protein of unknown function DUF2917 C3497_12860 0c424d898a6485fcbfd93b8493137e88 185 Gene3D G3DSA:3.90.1570.10 4 184 9.6E-21 T 14-10-2018 C3497_12860 0c424d898a6485fcbfd93b8493137e88 185 SUPERFAMILY SSF52980 5 172 5.25E-28 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3497_12860 0c424d898a6485fcbfd93b8493137e88 185 Pfam PF05685 Putative restriction endonuclease 13 166 6.4E-35 T 14-10-2018 IPR008538 Domain of unknown function DUF820 C3497_10815 95bf6f3e5d979c9e756423110e377954 384 Gene3D G3DSA:3.20.20.140 281 361 5.3E-9 T 14-10-2018 C3497_10815 95bf6f3e5d979c9e756423110e377954 384 Gene3D G3DSA:3.20.20.140 1 273 7.4E-14 T 14-10-2018 C3497_10815 95bf6f3e5d979c9e756423110e377954 384 SUPERFAMILY SSF51338 4 359 5.52E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3497_10815 95bf6f3e5d979c9e756423110e377954 384 PIRSF PIRSF038971 2 376 4.0E-112 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_10815 95bf6f3e5d979c9e756423110e377954 384 SUPERFAMILY SSF51556 54 343 3.53E-22 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3497_10815 95bf6f3e5d979c9e756423110e377954 384 Pfam PF01979 Amidohydrolase family 50 361 1.3E-10 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C3497_10815 95bf6f3e5d979c9e756423110e377954 384 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 373 2.0E-118 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_00520 60231120acdc51340bbfbb62ef2d2a7c 250 SUPERFAMILY SSF52540 2 220 2.77E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00520 60231120acdc51340bbfbb62ef2d2a7c 250 Pfam PF00005 ABC transporter 18 159 4.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_00520 60231120acdc51340bbfbb62ef2d2a7c 250 SMART SM00382 26 203 1.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00520 60231120acdc51340bbfbb62ef2d2a7c 250 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_00520 60231120acdc51340bbfbb62ef2d2a7c 250 Gene3D G3DSA:3.40.50.300 1 246 1.0E-55 T 14-10-2018 C3497_04475 259a65b334e1b36da2e0ced01af02918 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 399 422 1.4E-23 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_04475 259a65b334e1b36da2e0ced01af02918 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 295 306 1.4E-23 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_04475 259a65b334e1b36da2e0ced01af02918 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 176 195 1.4E-23 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_04475 259a65b334e1b36da2e0ced01af02918 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 455 482 1.4E-23 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_04475 259a65b334e1b36da2e0ced01af02918 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 371 393 1.4E-23 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_04475 259a65b334e1b36da2e0ced01af02918 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 333 356 1.4E-23 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_04475 259a65b334e1b36da2e0ced01af02918 954 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 36 595 6.1E-181 T 14-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3497_04475 259a65b334e1b36da2e0ced01af02918 954 SUPERFAMILY SSF51998 18 608 4.88E-173 T 14-10-2018 C3497_04475 259a65b334e1b36da2e0ced01af02918 954 Gene3D G3DSA:3.20.70.20 14 602 7.0E-190 T 14-10-2018 C3497_04475 259a65b334e1b36da2e0ced01af02918 954 Pfam PF02867 Ribonucleotide reductase, barrel domain 95 587 7.9E-141 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3497_08540 53466797c6419aa826133f62dc3d58b0 193 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 5 122 3.5E-10 T 14-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 C3497_09185 1d6d9046a8835647010521a092ff0ff0 121 SUPERFAMILY SSF160544 12 89 1.05E-22 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal C3497_09185 1d6d9046a8835647010521a092ff0ff0 121 Pfam PF01312 FlhB HrpN YscU SpaS Family 14 85 4.9E-18 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 C3497_09185 1d6d9046a8835647010521a092ff0ff0 121 Gene3D G3DSA:3.40.1690.10 11 90 1.3E-23 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal C3497_00195 f4b2797a2bc87fcdbb3e7797459d5232 170 Pfam PF14539 Domain of unknown function (DUF4442) 22 154 1.4E-12 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 C3497_00195 f4b2797a2bc87fcdbb3e7797459d5232 170 SUPERFAMILY SSF54637 13 158 1.46E-18 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_00195 f4b2797a2bc87fcdbb3e7797459d5232 170 Gene3D G3DSA:3.10.129.10 21 161 7.8E-25 T 14-10-2018 C3497_11255 90b62fa36b958bd55b0c7b261a62fc9a 497 Pfam PF06527 TniQ 20 159 5.9E-26 T 14-10-2018 IPR009492 TniQ C3497_08905 c5eafbb8af920d6517eb3f688f0838c9 201 SUPERFAMILY SSF81452 13 200 6.93E-49 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_08905 c5eafbb8af920d6517eb3f688f0838c9 201 Gene3D G3DSA:1.20.120.80 20 201 6.0E-48 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_08905 c5eafbb8af920d6517eb3f688f0838c9 201 Pfam PF00510 Cytochrome c oxidase subunit III 25 199 7.6E-15 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_06340 75f634ac50f4ed05f3031288ac920c4a 274 Pfam PF04250 Protein of unknown function (DUF429) 5 246 9.3E-9 T 14-10-2018 IPR007362 Protein of unknown function DUF429 C3497_06180 1eb017a733f808885ed24fb97c6a5240 83 Pfam PF05082 Rop-like 4 66 1.4E-26 T 14-10-2018 IPR007774 Putative nitrogen fixation protein C3497_06180 1eb017a733f808885ed24fb97c6a5240 83 Gene3D G3DSA:1.10.287.660 2 72 1.3E-13 T 14-10-2018 IPR029012 Helix hairpin bin domain superfamily C3497_06180 1eb017a733f808885ed24fb97c6a5240 83 PIRSF PIRSF037676 1 70 6.9E-24 T 14-10-2018 IPR007774 Putative nitrogen fixation protein C3497_03855 69997ed49d7d38c3421e216077033a78 312 Pfam PF02401 LytB protein 6 283 3.0E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C3497_03855 69997ed49d7d38c3421e216077033a78 312 Gene3D G3DSA:3.40.1010.20 100 196 1.6E-112 T 14-10-2018 C3497_03855 69997ed49d7d38c3421e216077033a78 312 Gene3D G3DSA:3.40.50.11270 15 99 1.6E-112 T 14-10-2018 C3497_03855 69997ed49d7d38c3421e216077033a78 312 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 4 286 37.984 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C3497_03855 69997ed49d7d38c3421e216077033a78 312 Gene3D G3DSA:3.40.1010.20 9 282 1.6E-112 T 14-10-2018 C3497_03855 69997ed49d7d38c3421e216077033a78 312 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 284 6.5E-101 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C3497_04970 9b2c5bc72b108c3141c9169f1c5f3fa3 415 Pfam PF13487 HD domain 219 278 1.4E-14 T 14-10-2018 C3497_04970 9b2c5bc72b108c3141c9169f1c5f3fa3 415 Gene3D G3DSA:1.10.3210.10 10 329 3.8E-47 T 14-10-2018 C3497_04970 9b2c5bc72b108c3141c9169f1c5f3fa3 415 SUPERFAMILY SSF109604 163 327 9.68E-28 T 14-10-2018 C3497_04970 9b2c5bc72b108c3141c9169f1c5f3fa3 415 Pfam PF11871 Domain of unknown function (DUF3391) 2 123 1.0E-21 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 C3497_04970 9b2c5bc72b108c3141c9169f1c5f3fa3 415 SMART SM00471 162 297 2.5E-4 T 14-10-2018 IPR003607 HD/PDEase domain C3497_10675 40756e3cef979ca1f99723d5adab5465 115 ProDom PD074011 PRECURSOR SIGNAL RESISTANCE CZCI ZINC COBALT-ZINC-CADMIUM SYSTEM COBALT CATION CADMIUM 1 111 1.0E-20 T 14-10-2018 IPR020487 Cobalt/zinc/cadmium resistance protein CzcI C3497_06935 1d3a684d5328aa0ccfb9610b972f2447 302 Gene3D G3DSA:3.30.428.70 12 301 5.9E-64 T 14-10-2018 C3497_06935 1d3a684d5328aa0ccfb9610b972f2447 302 PIRSF PIRSF000846 13 302 1.1E-78 T 14-10-2018 IPR009163 ATP adenylyltransferase GO:0003877|GO:0005524|GO:0009117 KEGG: 00230+2.7.7.53|KEGG: 00920+2.7.7.5|MetaCyc: PWY-5279 C3497_06935 1d3a684d5328aa0ccfb9610b972f2447 302 Pfam PF09830 ATP adenylyltransferase 241 299 3.0E-19 T 14-10-2018 IPR019200 ATP adenylyltransferase, C-terminal GO:0003877 KEGG: 00230+2.7.7.53|KEGG: 00920+2.7.7.5|MetaCyc: PWY-5279 C3497_06935 1d3a684d5328aa0ccfb9610b972f2447 302 SUPERFAMILY SSF54197 73 165 7.37E-17 T 14-10-2018 IPR036265 HIT-like superfamily C3497_08610 1445be9767b4f793ac53f2174f32611c 98 Pfam PF01381 Helix-turn-helix 9 46 3.7E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_08610 1445be9767b4f793ac53f2174f32611c 98 Gene3D G3DSA:1.10.260.40 8 77 3.8E-11 T 14-10-2018 C3497_08610 1445be9767b4f793ac53f2174f32611c 98 SUPERFAMILY SSF47413 9 63 2.82E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3497_03515 a3d9f57b6967996919c9a8e8308f526a 220 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 32.516 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 C3497_03515 a3d9f57b6967996919c9a8e8308f526a 220 Gene3D G3DSA:3.30.70.260 125 196 1.0E-73 T 14-10-2018 C3497_03515 a3d9f57b6967996919c9a8e8308f526a 220 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 212 8.0E-57 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 C3497_03515 a3d9f57b6967996919c9a8e8308f526a 220 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 3.8E-66 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 C3497_03515 a3d9f57b6967996919c9a8e8308f526a 220 SUPERFAMILY SSF100950 1 147 3.94E-44 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3497_03515 a3d9f57b6967996919c9a8e8308f526a 220 Gene3D G3DSA:3.40.50.1360 7 206 1.0E-73 T 14-10-2018 C3497_03515 a3d9f57b6967996919c9a8e8308f526a 220 SUPERFAMILY SSF75445 127 198 1.57E-23 T 14-10-2018 C3497_10075 3c1a4871d84b115dd0e3e70fa80658a8 324 SUPERFAMILY SSF51735 112 266 1.43E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_10075 3c1a4871d84b115dd0e3e70fa80658a8 324 SUPERFAMILY SSF50129 3 144 1.04E-37 T 14-10-2018 IPR011032 GroES-like superfamily C3497_10075 3c1a4871d84b115dd0e3e70fa80658a8 324 Gene3D G3DSA:3.90.180.10 12 318 1.1E-123 T 14-10-2018 C3497_10075 3c1a4871d84b115dd0e3e70fa80658a8 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 C3497_10075 3c1a4871d84b115dd0e3e70fa80658a8 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 3.2E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C3497_10075 3c1a4871d84b115dd0e3e70fa80658a8 324 Pfam PF00107 Zinc-binding dehydrogenase 151 253 8.3E-29 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C3497_10075 3c1a4871d84b115dd0e3e70fa80658a8 324 SMART SM00829 11 322 1.2E-43 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C3497_10075 3c1a4871d84b115dd0e3e70fa80658a8 324 Gene3D G3DSA:3.40.50.720 123 268 1.1E-123 T 14-10-2018 C3497_00240 ec080f3f56e0d4ec3d10184db552203b 428 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_00240 ec080f3f56e0d4ec3d10184db552203b 428 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 423 3.4E-196 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 C3497_00240 ec080f3f56e0d4ec3d10184db552203b 428 Gene3D G3DSA:3.90.1150.10 292 428 1.1E-51 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_00240 ec080f3f56e0d4ec3d10184db552203b 428 Gene3D G3DSA:3.40.640.10 6 288 4.6E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_00240 ec080f3f56e0d4ec3d10184db552203b 428 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 423 7.8E-142 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_00240 ec080f3f56e0d4ec3d10184db552203b 428 PIRSF PIRSF001434 1 427 7.6E-129 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3497_00240 ec080f3f56e0d4ec3d10184db552203b 428 SUPERFAMILY SSF53383 6 423 1.86E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_10825 4eb19fb25900bdbb85f96bdac0a52814 255 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 247 6.1E-99 T 14-10-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_10825 4eb19fb25900bdbb85f96bdac0a52814 255 SUPERFAMILY SSF56281 1 250 5.77E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_10825 4eb19fb25900bdbb85f96bdac0a52814 255 SMART SM00849 36 219 1.9E-4 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_10825 4eb19fb25900bdbb85f96bdac0a52814 255 Pfam PF12706 Beta-lactamase superfamily domain 47 219 4.3E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_10825 4eb19fb25900bdbb85f96bdac0a52814 255 Gene3D G3DSA:3.60.15.10 1 253 4.7E-68 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_03845 6798bd0b3be04c10041039e5fa80b134 79 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 10 50 1.0E-8 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 C3497_03845 6798bd0b3be04c10041039e5fa80b134 79 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 64 1.5E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 C3497_03845 6798bd0b3be04c10041039e5fa80b134 79 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.395 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 C3497_03845 6798bd0b3be04c10041039e5fa80b134 79 SUPERFAMILY SSF116842 5 70 3.66E-20 T 14-10-2018 C3497_03845 6798bd0b3be04c10041039e5fa80b134 79 PIRSF PIRSF006488 1 79 1.3E-23 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 C3497_03845 6798bd0b3be04c10041039e5fa80b134 79 Pfam PF02609 Exonuclease VII small subunit 11 61 1.5E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 C3497_03845 6798bd0b3be04c10041039e5fa80b134 79 Gene3D G3DSA:1.10.287.1040 4 76 1.4E-25 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 C3497_09635 6aaa6752d553277fc300dfa49371709f 444 SUPERFAMILY SSF52540 43 247 1.81E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09635 6aaa6752d553277fc300dfa49371709f 444 Pfam PF14524 Wzt C-terminal domain 301 430 4.4E-18 T 14-10-2018 IPR029439 Wzt, C-terminal C3497_09635 6aaa6752d553277fc300dfa49371709f 444 Pfam PF00005 ABC transporter 52 184 5.1E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_09635 6aaa6752d553277fc300dfa49371709f 444 Gene3D G3DSA:3.40.50.300 32 257 1.3E-45 T 14-10-2018 C3497_09635 6aaa6752d553277fc300dfa49371709f 444 Gene3D G3DSA:2.70.50.60 297 431 2.5E-19 T 14-10-2018 C3497_09635 6aaa6752d553277fc300dfa49371709f 444 SMART SM00382 61 232 3.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_03670 8c1955736f7ad20cb3fb2a4b040e6a7a 191 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 8 169 21.662 T 14-10-2018 IPR006839 Ribosome-associated, YjgA C3497_03670 8c1955736f7ad20cb3fb2a4b040e6a7a 191 Pfam PF04751 Protein of unknown function (DUF615) 15 165 4.6E-54 T 14-10-2018 IPR006839 Ribosome-associated, YjgA C3497_03670 8c1955736f7ad20cb3fb2a4b040e6a7a 191 Gene3D G3DSA:1.10.60.30 25 100 1.7E-30 T 14-10-2018 C3497_03670 8c1955736f7ad20cb3fb2a4b040e6a7a 191 PIRSF PIRSF016183 2 173 3.3E-63 T 14-10-2018 IPR006839 Ribosome-associated, YjgA C3497_03670 8c1955736f7ad20cb3fb2a4b040e6a7a 191 Gene3D G3DSA:1.10.60.30 102 174 1.1E-22 T 14-10-2018 C3497_03670 8c1955736f7ad20cb3fb2a4b040e6a7a 191 SUPERFAMILY SSF158710 25 167 1.01E-49 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily C3497_06225 3c1da1bf5cedfa9d377f76276bbe5c99 244 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 27 227 2.1E-79 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 C3497_06225 3c1da1bf5cedfa9d377f76276bbe5c99 244 PIRSF PIRSF006102 21 239 2.3E-75 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_06225 3c1da1bf5cedfa9d377f76276bbe5c99 244 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 21 230 26.548 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 C3497_06225 3c1da1bf5cedfa9d377f76276bbe5c99 244 Pfam PF02508 Rnf-Nqr subunit, membrane protein 27 220 2.6E-60 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_08240 aa7e911c02cadc6a212ccb858045f5c0 360 Pfam PF10040 CRISPR-associated endoribonuclease Cas6 228 351 1.8E-15 T 14-10-2018 IPR019267 CRISPR-associated protein Cas6, C-terminal C3497_08240 aa7e911c02cadc6a212ccb858045f5c0 360 Gene3D G3DSA:3.30.70.1900 218 353 2.7E-10 T 14-10-2018 C3497_12045 531eed17ebf575dd5419098a854e9cd2 305 Pfam PF03466 LysR substrate binding domain 90 295 1.6E-43 T 14-10-2018 IPR005119 LysR, substrate-binding C3497_12045 531eed17ebf575dd5419098a854e9cd2 305 Gene3D G3DSA:1.10.10.10 5 91 8.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_12045 531eed17ebf575dd5419098a854e9cd2 305 SUPERFAMILY SSF46785 5 114 4.42E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_12045 531eed17ebf575dd5419098a854e9cd2 305 Gene3D G3DSA:3.40.190.290 93 294 1.2E-61 T 14-10-2018 C3497_12045 531eed17ebf575dd5419098a854e9cd2 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3497_12045 531eed17ebf575dd5419098a854e9cd2 305 SUPERFAMILY SSF53850 92 299 2.35E-43 T 14-10-2018 C3497_02375 3498ad11c5ea03ae3d12d92623ef9cf3 157 SUPERFAMILY SSF51735 7 132 5.34E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_02375 3498ad11c5ea03ae3d12d92623ef9cf3 157 Pfam PF13380 CoA binding domain 15 129 5.2E-43 T 14-10-2018 IPR003781 CoA-binding GO:0048037 C3497_02375 3498ad11c5ea03ae3d12d92623ef9cf3 157 SMART SM00881 11 103 1.3E-25 T 14-10-2018 IPR003781 CoA-binding GO:0048037 C3497_02375 3498ad11c5ea03ae3d12d92623ef9cf3 157 Gene3D G3DSA:3.40.50.720 3 137 6.6E-46 T 14-10-2018 C3497_03840 d6756d1c271a536f8f4308ada8e8d6b7 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 218 230 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site C3497_03840 d6756d1c271a536f8f4308ada8e8d6b7 299 Gene3D G3DSA:1.10.600.10 6 299 8.2E-89 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3497_03840 d6756d1c271a536f8f4308ada8e8d6b7 299 SUPERFAMILY SSF48576 6 290 7.74E-82 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3497_03840 d6756d1c271a536f8f4308ada8e8d6b7 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 101 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site C3497_03840 d6756d1c271a536f8f4308ada8e8d6b7 299 Pfam PF00348 Polyprenyl synthetase 35 263 5.0E-53 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 C3497_07985 6bb3a16074d64e53de233f558addacda 291 Gene3D G3DSA:1.10.1270.20 204 291 1.2E-32 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C3497_07985 6bb3a16074d64e53de233f558addacda 291 SUPERFAMILY SSF75217 36 283 9.16E-96 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3497_07985 6bb3a16074d64e53de233f558addacda 291 Gene3D G3DSA:3.40.1280.10 33 203 4.0E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3497_07985 6bb3a16074d64e53de233f558addacda 291 PIRSF PIRSF000386 35 290 2.9E-92 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C3497_07985 6bb3a16074d64e53de233f558addacda 291 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 291 108.714 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C3497_07985 6bb3a16074d64e53de233f558addacda 291 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 36 270 5.0E-90 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C3497_07985 6bb3a16074d64e53de233f558addacda 291 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 57 259 5.1E-57 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C3497_13750 11ba06dde6b9f450646b54cfcbabb693 211 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 105 193 2.6E-11 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal C3497_13750 11ba06dde6b9f450646b54cfcbabb693 211 SUPERFAMILY SSF46689 12 84 6.31E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_13750 11ba06dde6b9f450646b54cfcbabb693 211 SUPERFAMILY SSF48498 103 195 6.67E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C3497_13750 11ba06dde6b9f450646b54cfcbabb693 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 4.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_13750 11ba06dde6b9f450646b54cfcbabb693 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 4.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_13750 11ba06dde6b9f450646b54cfcbabb693 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 6.5E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_13750 11ba06dde6b9f450646b54cfcbabb693 211 Gene3D G3DSA:1.10.357.10 8 206 3.3E-38 T 14-10-2018 C3497_04010 a82840804439991b06a94258f291f914 107 Pfam PF00037 4Fe-4S binding domain 34 56 1.8E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_04010 a82840804439991b06a94258f291f914 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_04010 a82840804439991b06a94258f291f914 107 Pfam PF12800 4Fe-4S binding domain 7 23 0.048 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_04010 a82840804439991b06a94258f291f914 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.1E-14 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C3497_04010 a82840804439991b06a94258f291f914 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.1E-14 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C3497_04010 a82840804439991b06a94258f291f914 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.1E-14 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C3497_04010 a82840804439991b06a94258f291f914 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 1.4E-19 T 14-10-2018 IPR022569 Ferredoxin, C-terminal C3497_04010 a82840804439991b06a94258f291f914 107 SUPERFAMILY SSF54862 1 95 6.12E-25 T 14-10-2018 C3497_04010 a82840804439991b06a94258f291f914 107 Gene3D G3DSA:3.30.70.20 2 104 9.3E-32 T 14-10-2018 C3497_09035 0cb527aa1e90a82ed3bdc99c67ac73a2 383 Pfam PF00266 Aminotransferase class-V 36 317 1.3E-24 T 14-10-2018 IPR000192 Aminotransferase class V domain C3497_09035 0cb527aa1e90a82ed3bdc99c67ac73a2 383 PIRSF PIRSF000524 1 382 6.6E-59 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 C3497_09035 0cb527aa1e90a82ed3bdc99c67ac73a2 383 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 373 200.885 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 C3497_09035 0cb527aa1e90a82ed3bdc99c67ac73a2 383 Gene3D G3DSA:3.90.1150.10 11 354 4.0E-110 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_09035 0cb527aa1e90a82ed3bdc99c67ac73a2 383 SUPERFAMILY SSF53383 9 367 9.22E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_09035 0cb527aa1e90a82ed3bdc99c67ac73a2 383 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 9 361 1.2E-146 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 C3497_09035 0cb527aa1e90a82ed3bdc99c67ac73a2 383 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 6 363 4.1E-154 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 C3497_09035 0cb527aa1e90a82ed3bdc99c67ac73a2 383 Gene3D G3DSA:3.40.640.10 19 263 4.0E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_00275 1524f190da2e84655812fa708d16c078 285 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 2 285 29.019 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 C3497_00275 1524f190da2e84655812fa708d16c078 285 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 9 284 2.7E-101 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 C3497_00275 1524f190da2e84655812fa708d16c078 285 Gene3D G3DSA:1.10.357.140 22 166 8.0E-40 T 14-10-2018 C3497_00275 1524f190da2e84655812fa708d16c078 285 Pfam PF01040 UbiA prenyltransferase family 25 269 2.0E-58 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 C3497_00275 1524f190da2e84655812fa708d16c078 285 Gene3D G3DSA:1.20.120.1780 167 284 3.1E-10 T 14-10-2018 C3497_00275 1524f190da2e84655812fa708d16c078 285 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 64 86 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site C3497_10315 e2e959514fdcd763eb7ff5f7c9a8b8c8 110 Gene3D G3DSA:3.30.370.10 1 89 2.3E-14 T 14-10-2018 IPR035905 Barstar-like superfamily C3497_10315 e2e959514fdcd763eb7ff5f7c9a8b8c8 110 SUPERFAMILY SSF52038 4 91 1.01E-23 T 14-10-2018 IPR035905 Barstar-like superfamily C3497_10315 e2e959514fdcd763eb7ff5f7c9a8b8c8 110 Pfam PF01337 Barstar (barnase inhibitor) 6 86 3.4E-25 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) C3497_12570 17de88801833f3ddecd24c3abc64ad91 568 Pfam PF03235 Protein of unknown function DUF262 10 255 4.9E-27 T 14-10-2018 IPR004919 Domain of unknown function DUF262 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 1.0E-219 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 638 4.4E-125 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 4.2E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 4.2E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 4.2E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 4.2E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 4.2E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 4.2E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 4.2E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 4.0E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 4.0E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 4.0E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 4.0E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 4.0E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 4.0E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 4.0E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 4.0E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C3497_13050 b3c053ba8f965958afe97bbd72b2f442 656 Pfam PF01578 Cytochrome C assembly protein 89 295 8.8E-53 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 C3497_10990 ba28afedc786bb436abebcff1e805f8d 166 SUPERFAMILY SSF49503 55 165 1.94E-30 T 14-10-2018 IPR008972 Cupredoxin C3497_10990 ba28afedc786bb436abebcff1e805f8d 166 Gene3D G3DSA:2.60.40.420 43 166 5.4E-29 T 14-10-2018 IPR008972 Cupredoxin C3497_10990 ba28afedc786bb436abebcff1e805f8d 166 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 64 165 1.7E-8 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 C3497_03315 4724a6d5ffaa29dd2e4d5c220330e68e 78 Gene3D G3DSA:2.30.170.40 2 78 3.1E-33 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_03315 4724a6d5ffaa29dd2e4d5c220330e68e 78 SUPERFAMILY SSF143800 1 77 3.73E-31 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_03315 4724a6d5ffaa29dd2e4d5c220330e68e 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.9E-27 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_03315 4724a6d5ffaa29dd2e4d5c220330e68e 78 Pfam PF00830 Ribosomal L28 family 3 62 4.5E-28 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_03315 4724a6d5ffaa29dd2e4d5c220330e68e 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.944 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_04905 a3ee0f6538bd7df962f3fd07d754711a 178 SUPERFAMILY SSF54001 40 166 4.81E-44 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily C3497_04905 a3ee0f6538bd7df962f3fd07d754711a 178 Gene3D G3DSA:3.90.1720.10 13 163 1.7E-45 T 14-10-2018 C3497_04905 a3ee0f6538bd7df962f3fd07d754711a 178 Pfam PF00877 NlpC/P60 family 57 163 2.7E-29 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain C3497_05695 3c5538df720544a8d249f5d5037e1b4e 570 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 1.8E-42 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 C3497_05695 3c5538df720544a8d249f5d5037e1b4e 570 SUPERFAMILY SSF52518 2 181 1.68E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_05695 3c5538df720544a8d249f5d5037e1b4e 570 SUPERFAMILY SSF52518 366 567 7.23E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3497_05695 3c5538df720544a8d249f5d5037e1b4e 570 Gene3D G3DSA:3.40.50.970 1 185 6.1E-72 T 14-10-2018 C3497_05695 3c5538df720544a8d249f5d5037e1b4e 570 SUPERFAMILY SSF52467 186 360 1.02E-62 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C3497_05695 3c5538df720544a8d249f5d5037e1b4e 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 7.1E-58 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 C3497_05695 3c5538df720544a8d249f5d5037e1b4e 570 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 541 1.5E-49 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 C3497_05695 3c5538df720544a8d249f5d5037e1b4e 570 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 565 8.2E-254 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C3497_05695 3c5538df720544a8d249f5d5037e1b4e 570 Gene3D G3DSA:3.40.50.970 362 568 2.7E-67 T 14-10-2018 C3497_05695 3c5538df720544a8d249f5d5037e1b4e 570 Gene3D G3DSA:3.40.50.1220 187 358 3.3E-59 T 14-10-2018 C3497_03050 b17e115b31ba5869c57121c15f3b7ed7 959 Pfam PF09822 ABC-type uncharacterized transport system 280 433 5.0E-26 T 14-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 C3497_03050 b17e115b31ba5869c57121c15f3b7ed7 959 Pfam PF09822 ABC-type uncharacterized transport system 444 682 1.2E-30 T 14-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 C3497_03050 b17e115b31ba5869c57121c15f3b7ed7 959 Pfam PF12679 ABC-2 family transporter protein 64 273 2.4E-7 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 C3497_06020 0871a2aa50f142cb7f33623687704409 76 Pfam PF10981 Protein of unknown function (DUF2788) 23 73 3.2E-23 T 14-10-2018 IPR021249 Protein of unknown function DUF2788 C3497_08195 7959c58edba044df87d03f849910bf31 979 Gene3D G3DSA:3.30.70.2220 167 374 2.8E-51 T 14-10-2018 IPR038242 Cmr2, N-terminal domain superfamily C3497_08195 7959c58edba044df87d03f849910bf31 979 Pfam PF12469 CRISPR-associated protein 201 327 3.6E-32 T 14-10-2018 IPR024615 CRISPR-associated protein Cmr2, N-terminal C3497_08195 7959c58edba044df87d03f849910bf31 979 TIGRFAM TIGR02577 cas_TM1794_Cmr2: CRISPR-associated protein Cas10/Cmr2, subtype III-B 201 830 9.9E-63 T 14-10-2018 IPR013407 CRISPR-associated protein Cmr2 C3497_02310 67ec940e18fba44e8e88bfae361e21ce 274 Pfam PF03099 Biotin/lipoate A/B protein ligase family 60 161 1.8E-14 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 C3497_02310 67ec940e18fba44e8e88bfae361e21ce 274 SUPERFAMILY SSF50037 226 271 7.78E-8 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal C3497_02310 67ec940e18fba44e8e88bfae361e21ce 274 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 34 271 3.0E-51 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_02310 67ec940e18fba44e8e88bfae361e21ce 274 Pfam PF02237 Biotin protein ligase C terminal domain 229 271 7.7E-7 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_02310 67ec940e18fba44e8e88bfae361e21ce 274 SUPERFAMILY SSF55681 28 222 9.82E-51 T 14-10-2018 C3497_02310 67ec940e18fba44e8e88bfae361e21ce 274 Gene3D G3DSA:3.30.930.10 19 224 3.1E-55 T 14-10-2018 C3497_02310 67ec940e18fba44e8e88bfae361e21ce 274 Gene3D G3DSA:2.30.30.100 225 274 9.6E-13 T 14-10-2018 C3497_10455 e23be01f5698194193c1fcc2dd56a971 413 SUPERFAMILY SSF53756 8 398 7.85E-38 T 14-10-2018 C3497_10455 e23be01f5698194193c1fcc2dd56a971 413 Gene3D G3DSA:3.40.50.2000 138 222 1.8E-6 T 14-10-2018 C3497_10455 e23be01f5698194193c1fcc2dd56a971 413 Pfam PF13692 Glycosyl transferases group 1 230 366 2.4E-28 T 14-10-2018 C3497_10455 e23be01f5698194193c1fcc2dd56a971 413 TIGRFAM TIGR03087 stp1: sugar transferase, PEP-CTERM/EpsH1 system associated 7 399 3.1E-160 T 14-10-2018 IPR017521 Sugar transferase, PEP-CTERM, Stp1 C3497_10455 e23be01f5698194193c1fcc2dd56a971 413 Gene3D G3DSA:3.40.50.2000 223 383 2.0E-24 T 14-10-2018 C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 Gene3D G3DSA:3.40.1190.20 218 492 1.2E-73 T 14-10-2018 IPR029056 Ribokinase-like C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 SUPERFAMILY SSF64153 7 244 1.15E-55 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 230 484 1.1E-55 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 223 491 20.802 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 Gene3D G3DSA:3.40.50.10260 12 214 2.3E-57 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 PIRSF PIRSF017184 14 494 8.1E-108 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 SUPERFAMILY SSF53613 223 491 1.19E-66 T 14-10-2018 IPR029056 Ribokinase-like C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 429 439 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 Pfam PF03853 YjeF-related protein N-terminus 28 189 3.1E-43 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 Pfam PF01256 Carbohydrate kinase 247 470 4.0E-49 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 7 210 21.9 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 C3497_04975 63479d3581a3d882e2024b0ad8b01f44 502 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 26 209 9.2E-40 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 C3497_11640 01f27281f747e3a34c960bfc1b5fc9f5 209 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 15 194 1.3E-38 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 C3497_11640 01f27281f747e3a34c960bfc1b5fc9f5 209 Gene3D G3DSA:3.40.920.10 4 205 1.4E-40 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 C3497_11640 01f27281f747e3a34c960bfc1b5fc9f5 209 SUPERFAMILY SSF53323 6 204 1.83E-46 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 C3497_02480 2ea106bdfdbf48c11b79c5fa563e0f44 880 Gene3D G3DSA:3.20.20.140 3 202 2.4E-16 T 14-10-2018 C3497_02480 2ea106bdfdbf48c11b79c5fa563e0f44 880 SUPERFAMILY SSF89550 11 183 4.71E-13 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 C3497_02480 2ea106bdfdbf48c11b79c5fa563e0f44 880 SUPERFAMILY SSF52540 280 847 6.79E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_05220 a36e79246ad263af16658a5ba8304c1c 155 Pfam PF04314 Copper chaperone PCu(A)C 23 124 2.8E-36 T 14-10-2018 IPR007410 Copper chaperone PCuAC C3497_05220 a36e79246ad263af16658a5ba8304c1c 155 SUPERFAMILY SSF110087 4 139 5.23E-44 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily C3497_05220 a36e79246ad263af16658a5ba8304c1c 155 Gene3D G3DSA:2.60.40.1890 26 141 1.0E-36 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily C3497_12140 423c5ac195aa3fa0a191eb3547386ff6 465 SUPERFAMILY SSF51984 4 97 1.47E-15 T 14-10-2018 C3497_12140 423c5ac195aa3fa0a191eb3547386ff6 465 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 457 3.7E-121 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3497_12140 423c5ac195aa3fa0a191eb3547386ff6 465 SUPERFAMILY SSF53623 114 317 8.5E-49 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_12140 423c5ac195aa3fa0a191eb3547386ff6 465 Gene3D G3DSA:3.90.190.20 320 456 3.4E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_12140 423c5ac195aa3fa0a191eb3547386ff6 465 Gene3D G3DSA:3.40.1190.10 97 319 2.5E-58 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_12140 423c5ac195aa3fa0a191eb3547386ff6 465 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 459 32.686 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3497_12140 423c5ac195aa3fa0a191eb3547386ff6 465 SUPERFAMILY SSF53244 319 459 1.76E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_12140 423c5ac195aa3fa0a191eb3547386ff6 465 Pfam PF08245 Mur ligase middle domain 120 300 1.6E-28 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3497_12140 423c5ac195aa3fa0a191eb3547386ff6 465 Gene3D G3DSA:3.40.50.720 3 96 1.0E-22 T 14-10-2018 C3497_14130 a25d1ac7596e11da7081160226d30ec1 88 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 49 4.6E-7 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C3497_14130 a25d1ac7596e11da7081160226d30ec1 88 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 24 49 1.1E-5 T 14-10-2018 C3497_14130 a25d1ac7596e11da7081160226d30ec1 88 Gene3D G3DSA:3.40.1620.10 1 50 1.5E-5 T 14-10-2018 C3497_14130 a25d1ac7596e11da7081160226d30ec1 88 SUPERFAMILY SSF143120 1 49 1.06E-8 T 14-10-2018 IPR036165 YefM-like superfamily C3497_05095 0925781586b473c197f62c6d53f9236f 207 Pfam PF01810 LysE type translocator 12 189 3.7E-11 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3497_09755 40fae6873ca98dffcc9e2d8242d00344 499 Pfam PF11074 Domain of unknown function(DUF2779) 301 424 8.0E-38 T 14-10-2018 IPR021301 Domain of unknown functionDUF2779 C3497_08865 0e0033a69d607ff369141e95b90b312e 447 Pfam PF00571 CBS domain 283 327 1.3E-5 T 14-10-2018 IPR000644 CBS domain C3497_08865 0e0033a69d607ff369141e95b90b312e 447 SMART SM01091 344 426 3.8E-31 T 14-10-2018 IPR005170 Transporter-associated domain C3497_08865 0e0033a69d607ff369141e95b90b312e 447 SUPERFAMILY SSF56176 342 433 6.0E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3497_08865 0e0033a69d607ff369141e95b90b312e 447 Gene3D G3DSA:3.10.580.10 192 343 1.5E-43 T 14-10-2018 C3497_08865 0e0033a69d607ff369141e95b90b312e 447 Gene3D G3DSA:3.30.465.10 344 425 1.7E-34 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3497_08865 0e0033a69d607ff369141e95b90b312e 447 SUPERFAMILY SSF54631 198 332 7.33E-26 T 14-10-2018 C3497_08865 0e0033a69d607ff369141e95b90b312e 447 Pfam PF03471 Transporter associated domain 345 424 3.5E-22 T 14-10-2018 IPR005170 Transporter-associated domain C3497_08865 0e0033a69d607ff369141e95b90b312e 447 Pfam PF01595 Domain of unknown function DUF21 5 196 6.1E-43 T 14-10-2018 IPR002550 CNNM, transmembrane domain C3497_08865 0e0033a69d607ff369141e95b90b312e 447 SMART SM00116 282 330 0.71 T 14-10-2018 IPR000644 CBS domain C3497_08865 0e0033a69d607ff369141e95b90b312e 447 SMART SM00116 220 269 20.0 T 14-10-2018 IPR000644 CBS domain C3497_00850 25ca21cb15f62e3ae6b6e7c9c34338c0 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 96 330 2.7E-17 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_09060 1441bca64d87519b6a876ae38b25d692 286 Gene3D G3DSA:1.10.3730.20 61 142 2.7E-5 T 14-10-2018 C3497_09060 1441bca64d87519b6a876ae38b25d692 286 SUPERFAMILY SSF103481 191 284 3.92E-8 T 14-10-2018 C3497_09060 1441bca64d87519b6a876ae38b25d692 286 SUPERFAMILY SSF103481 48 139 2.09E-8 T 14-10-2018 C3497_12335 7c8f24745434dad09190fbbff3f29ba3 229 Pfam PF07963 Prokaryotic N-terminal methylation motif 18 39 2.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_12335 7c8f24745434dad09190fbbff3f29ba3 229 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 38 1.3E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_06070 b5c358e8a6f35379011c57011126d828 146 SUPERFAMILY SSF55729 13 140 3.19E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_06070 b5c358e8a6f35379011c57011126d828 146 Gene3D G3DSA:3.40.630.30 11 141 9.0E-36 T 14-10-2018 C3497_06070 b5c358e8a6f35379011c57011126d828 146 Pfam PF13673 Acetyltransferase (GNAT) domain 25 140 9.8E-19 T 14-10-2018 IPR000182 GNAT domain C3497_08965 8779cd6541645175966d285792e83d9f 389 Pfam PF02239 Cytochrome D1 heme domain 25 383 1.2E-106 T 14-10-2018 C3497_08965 8779cd6541645175966d285792e83d9f 389 Gene3D G3DSA:2.140.10.20 19 386 1.0E-52 T 14-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily C3497_08965 8779cd6541645175966d285792e83d9f 389 SUPERFAMILY SSF51004 17 386 9.02E-80 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily C3497_10720 ac885ba941e96c1c3dfc3f47c0e3f19b 165 Pfam PF06146 Phosphate-starvation-inducible E 74 142 7.3E-18 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like C3497_07555 13b44790d48c89f9dfdc7bc8d8a66fb0 276 Gene3D G3DSA:1.10.150.650 96 168 8.5E-85 T 14-10-2018 C3497_07555 13b44790d48c89f9dfdc7bc8d8a66fb0 276 Gene3D G3DSA:3.20.20.140 4 249 8.5E-85 T 14-10-2018 C3497_07555 13b44790d48c89f9dfdc7bc8d8a66fb0 276 SUPERFAMILY SSF89550 1 273 1.82E-48 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 C3497_07555 13b44790d48c89f9dfdc7bc8d8a66fb0 276 Pfam PF02811 PHP domain 4 132 4.3E-9 T 14-10-2018 IPR004013 PHP domain GO:0003824 C3497_07555 13b44790d48c89f9dfdc7bc8d8a66fb0 276 SMART SM00481 3 68 1.3E-18 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal C3497_11665 7da971813c3ca3fd5013f9c9e5a8cec5 402 SUPERFAMILY SSF53822 32 391 9.16E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_11665 7da971813c3ca3fd5013f9c9e5a8cec5 402 Pfam PF13458 Periplasmic binding protein 32 374 2.4E-64 T 14-10-2018 IPR028081 Leucine-binding protein domain C3497_11665 7da971813c3ca3fd5013f9c9e5a8cec5 402 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 55 71 1.2E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_11665 7da971813c3ca3fd5013f9c9e5a8cec5 402 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 33 49 1.2E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_11665 7da971813c3ca3fd5013f9c9e5a8cec5 402 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 267 285 1.2E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_11665 7da971813c3ca3fd5013f9c9e5a8cec5 402 Gene3D G3DSA:3.40.50.2300 35 350 1.9E-81 T 14-10-2018 C3497_11665 7da971813c3ca3fd5013f9c9e5a8cec5 402 Gene3D G3DSA:3.40.50.2300 157 285 1.9E-81 T 14-10-2018 C3497_04815 5323850b97d21537ee7fb917225728a8 100 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 92 1.2E-30 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 C3497_04740 7913e3bcb5b62d67c7a0cea70c5f6539 409 Pfam PF02687 FtsX-like permease family 302 400 1.4E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3497_06640 6ddc54fdb02e687679659b428a01e7c6 258 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 3 245 8.5E-85 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 C3497_06640 6ddc54fdb02e687679659b428a01e7c6 258 Gene3D G3DSA:3.90.550.10 2 252 1.4E-94 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_06640 6ddc54fdb02e687679659b428a01e7c6 258 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 252 42.465 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 C3497_06640 6ddc54fdb02e687679659b428a01e7c6 258 SUPERFAMILY SSF53448 5 251 1.24E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_06640 6ddc54fdb02e687679659b428a01e7c6 258 Pfam PF02348 Cytidylyltransferase 6 225 5.2E-52 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 C3497_05785 4b8bbfc1870251553573af79701dcf80 282 Pfam PF01263 Aldose 1-epimerase 16 277 3.2E-42 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 C3497_05785 4b8bbfc1870251553573af79701dcf80 282 Gene3D G3DSA:2.70.98.10 1 281 2.2E-84 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 C3497_05785 4b8bbfc1870251553573af79701dcf80 282 PIRSF PIRSF016020 14 282 9.9E-64 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 C3497_05785 4b8bbfc1870251553573af79701dcf80 282 SUPERFAMILY SSF74650 4 279 1.88E-62 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 C3497_03250 e793f16fe05bc7c5e0f9e5b75ee252f3 481 SUPERFAMILY SSF111283 25 480 1.06E-130 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 C3497_03250 e793f16fe05bc7c5e0f9e5b75ee252f3 481 Gene3D G3DSA:3.30.2290.10 17 240 4.7E-15 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal C3497_03250 e793f16fe05bc7c5e0f9e5b75ee252f3 481 Pfam PF01523 Putative modulator of DNA gyrase 40 332 3.1E-65 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 C3497_03250 e793f16fe05bc7c5e0f9e5b75ee252f3 481 PIRSF PIRSF004919 21 481 4.5E-139 T 14-10-2018 IPR025502 TldD C3497_08395 4abb44fe72d00511cc660ad1f0fb1d07 110 SUPERFAMILY SSF46626 6 107 6.16E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08395 4abb44fe72d00511cc660ad1f0fb1d07 110 Gene3D G3DSA:1.10.760.10 28 109 2.1E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_12080 6cc25d011b184c8bdc86b4f1fc3dda1a 412 SUPERFAMILY SSF56266 16 409 1.57E-137 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C3497_12080 6cc25d011b184c8bdc86b4f1fc3dda1a 412 Gene3D G3DSA:3.10.20.340 279 412 3.3E-42 T 14-10-2018 C3497_12080 6cc25d011b184c8bdc86b4f1fc3dda1a 412 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 412 158.148 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C3497_12080 6cc25d011b184c8bdc86b4f1fc3dda1a 412 Pfam PF01960 ArgJ family 22 412 8.7E-142 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C3497_12080 6cc25d011b184c8bdc86b4f1fc3dda1a 412 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 16 412 3.2E-126 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C3497_12080 6cc25d011b184c8bdc86b4f1fc3dda1a 412 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 410 1.0E-165 T 14-10-2018 C3497_12080 6cc25d011b184c8bdc86b4f1fc3dda1a 412 Gene3D G3DSA:3.60.70.12 12 278 8.8E-91 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C3497_08620 628a3334f628ffde548157212abff534 149 PIRSF PIRSF006113 1 80 1.1E-16 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 C3497_08620 628a3334f628ffde548157212abff534 149 PIRSF PIRSF006113 92 146 4.3 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 C3497_08620 628a3334f628ffde548157212abff534 149 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 116 1.8E-28 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 C3497_08620 628a3334f628ffde548157212abff534 149 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 2 144 1.2E-34 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 C3497_08620 628a3334f628ffde548157212abff534 149 Gene3D G3DSA:3.30.479.10 90 148 3.4E-10 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 C3497_08620 628a3334f628ffde548157212abff534 149 Gene3D G3DSA:3.30.479.10 1 89 2.4E-23 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 C3497_08620 628a3334f628ffde548157212abff534 149 SUPERFAMILY SSF55620 1 145 2.33E-40 T 14-10-2018 C3497_11025 9b868f147d8abf0bacea98bd54aa91a2 147 Pfam PF04214 Protein of unknown function, DUF 55 122 2.7E-30 T 14-10-2018 IPR007332 Protein of unknown function DUF411 C3497_11025 9b868f147d8abf0bacea98bd54aa91a2 147 SUPERFAMILY SSF52833 22 103 2.48E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_13230 135ba868f8ad5fef11f642e9471e9bd7 236 SUPERFAMILY SSF46894 124 226 1.11E-32 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3497_13230 135ba868f8ad5fef11f642e9471e9bd7 236 Gene3D G3DSA:3.40.50.2300 1 128 1.8E-42 T 14-10-2018 C3497_13230 135ba868f8ad5fef11f642e9471e9bd7 236 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 226 9.5E-112 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 C3497_13230 135ba868f8ad5fef11f642e9471e9bd7 236 SMART SM00862 150 225 1.4E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_13230 135ba868f8ad5fef11f642e9471e9bd7 236 SUPERFAMILY SSF52172 2 127 8.97E-46 T 14-10-2018 IPR011006 CheY-like superfamily C3497_13230 135ba868f8ad5fef11f642e9471e9bd7 236 Gene3D G3DSA:1.10.10.10 129 228 1.4E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_13230 135ba868f8ad5fef11f642e9471e9bd7 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 8.3E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3497_13230 135ba868f8ad5fef11f642e9471e9bd7 236 Pfam PF00072 Response regulator receiver domain 5 117 5.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_13230 135ba868f8ad5fef11f642e9471e9bd7 236 SMART SM00448 3 116 2.9E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3497_07150 c7e875cf766879f3a1949436e111b436 374 Gene3D G3DSA:3.30.9.10 86 326 1.5E-144 T 14-10-2018 C3497_07150 c7e875cf766879f3a1949436e111b436 374 Pfam PF01266 FAD dependent oxidoreductase 5 369 8.0E-70 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 C3497_07150 c7e875cf766879f3a1949436e111b436 374 Gene3D G3DSA:3.50.50.60 5 365 1.5E-144 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_07150 c7e875cf766879f3a1949436e111b436 374 SUPERFAMILY SSF51905 4 326 8.2E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_00430 67741f3012e19c22112e4c95e1ca4636 229 Pfam PF02517 CAAX protease self-immunity 113 218 7.4E-10 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 Gene3D G3DSA:3.40.1190.10 100 342 2.5E-74 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 Pfam PF08245 Mur ligase middle domain 109 318 1.9E-46 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 SUPERFAMILY SSF53244 341 494 1.98E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 492 32.848 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 Gene3D G3DSA:3.90.190.20 350 502 1.6E-55 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 Pfam PF02875 Mur ligase family, glutamate ligase domain 340 427 1.9E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 492 3.7E-144 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 SUPERFAMILY SSF53623 100 337 3.66E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 SUPERFAMILY SSF63418 15 98 3.79E-20 T 14-10-2018 IPR035911 MurE/MurF, N-terminal C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 Pfam PF01225 Mur ligase family, catalytic domain 21 86 3.5E-10 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C3497_12155 44a6df26bd7ba607dac5328e7a006a7e 503 Gene3D G3DSA:3.40.1390.10 7 99 5.1E-23 T 14-10-2018 C3497_01330 da74de393b78fd85b4ce98b9121fbbc7 216 Gene3D G3DSA:3.30.450.40 36 214 1.3E-47 T 14-10-2018 IPR029016 GAF-like domain superfamily C3497_01330 da74de393b78fd85b4ce98b9121fbbc7 216 Pfam PF04340 Protein of unknown function, DUF484 2 211 2.9E-36 T 14-10-2018 IPR007435 Protein of unknown function DUF484 C3497_05435 cba2940724b7c089284c05adf5390591 191 Gene3D G3DSA:3.90.950.10 1 190 2.2E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3497_05435 cba2940724b7c089284c05adf5390591 191 Pfam PF02545 Maf-like protein 2 184 3.0E-41 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3497_05435 cba2940724b7c089284c05adf5390591 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 2.5E-47 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3497_05435 cba2940724b7c089284c05adf5390591 191 SUPERFAMILY SSF52972 1 184 3.53E-56 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3497_05435 cba2940724b7c089284c05adf5390591 191 Hamap MF_00528 Septum formation protein Maf [maf]. 2 190 29.043 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3497_05435 cba2940724b7c089284c05adf5390591 191 PIRSF PIRSF006305 1 190 2.6E-39 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3497_11370 be0cb1e175224e19a16a9a16af1c6de6 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 4.5E-23 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 C3497_11370 be0cb1e175224e19a16a9a16af1c6de6 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 23.208 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 C3497_11370 be0cb1e175224e19a16a9a16af1c6de6 78 Pfam PF02416 mttA/Hcf106 family 5 49 1.3E-14 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 C3497_11975 2fd2fc9d3f9e35685bbd550186417952 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 38 3.3E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_11975 2fd2fc9d3f9e35685bbd550186417952 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 39 1.3E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_11975 2fd2fc9d3f9e35685bbd550186417952 156 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 18 136 4.2E-23 T 14-10-2018 IPR013362 Pilus modification type IV, PilV C3497_05305 ceea69ba8cf527e52946542c7abb1bad 270 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 18 66 1.0E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_05305 ceea69ba8cf527e52946542c7abb1bad 270 SMART SM00530 5 62 0.0024 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3497_05305 ceea69ba8cf527e52946542c7abb1bad 270 SUPERFAMILY SSF47413 17 64 8.45E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3497_05305 ceea69ba8cf527e52946542c7abb1bad 270 Gene3D G3DSA:1.10.260.40 1 63 2.6E-6 T 14-10-2018 C3497_05185 8cef3e4a02f00c4c753de559859dc572 333 Gene3D G3DSA:2.70.70.10 180 330 7.6E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif C3497_05185 8cef3e4a02f00c4c753de559859dc572 333 Pfam PF01551 Peptidase family M23 229 323 1.2E-29 T 14-10-2018 IPR016047 Peptidase M23 C3497_05185 8cef3e4a02f00c4c753de559859dc572 333 SUPERFAMILY SSF51261 200 327 1.26E-53 T 14-10-2018 IPR011055 Duplicated hybrid motif C3497_12165 a3e9ddc9700bb3e73587cfbb9c55483c 88 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 3 84 4.8E-25 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 C3497_12165 a3e9ddc9700bb3e73587cfbb9c55483c 88 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 17.396 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 C3497_12165 a3e9ddc9700bb3e73587cfbb9c55483c 88 Pfam PF04999 Cell division protein FtsL 6 85 1.1E-25 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 C3497_04605 2eaece92b51573032ec04e8a4c7ea1b7 282 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 41 282 5.0E-118 T 14-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD C3497_04605 2eaece92b51573032ec04e8a4c7ea1b7 282 SUPERFAMILY SSF52540 40 280 3.92E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04605 2eaece92b51573032ec04e8a4c7ea1b7 282 Gene3D G3DSA:3.40.50.300 37 282 1.6E-48 T 14-10-2018 C3497_04605 2eaece92b51573032ec04e8a4c7ea1b7 282 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 260 281 2.3E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal C3497_04605 2eaece92b51573032ec04e8a4c7ea1b7 282 Pfam PF00005 ABC transporter 57 212 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_02785 47ecd81f9ee5ea21b1d4c6bdc3111cb1 416 PIRSF PIRSF004640 7 414 4.0E-132 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C3497_02785 47ecd81f9ee5ea21b1d4c6bdc3111cb1 416 Pfam PF04551 GcpE protein 17 404 1.7E-111 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C3497_02785 47ecd81f9ee5ea21b1d4c6bdc3111cb1 416 Gene3D G3DSA:3.30.413.10 298 415 4.9E-36 T 14-10-2018 C3497_02785 47ecd81f9ee5ea21b1d4c6bdc3111cb1 416 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 12 408 29.819 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C3497_02785 47ecd81f9ee5ea21b1d4c6bdc3111cb1 416 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 14 403 5.7E-122 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C3497_02785 47ecd81f9ee5ea21b1d4c6bdc3111cb1 416 Gene3D G3DSA:3.20.20.20 11 297 6.5E-98 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3497_00720 8f8b5f1942572db74f96fd9d39ec221d 290 SUPERFAMILY SSF53474 10 287 1.12E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_00720 8f8b5f1942572db74f96fd9d39ec221d 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 7.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_00720 8f8b5f1942572db74f96fd9d39ec221d 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 7.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_00720 8f8b5f1942572db74f96fd9d39ec221d 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 7.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_00720 8f8b5f1942572db74f96fd9d39ec221d 290 Pfam PF12697 Alpha/beta hydrolase family 31 282 4.1E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_00720 8f8b5f1942572db74f96fd9d39ec221d 290 Gene3D G3DSA:3.40.50.1820 8 283 1.5E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_10585 4fe1aa23df87c437cea4275833953edc 665 Gene3D G3DSA:3.30.565.10 486 646 9.8E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_10585 4fe1aa23df87c437cea4275833953edc 665 SUPERFAMILY SSF55874 493 646 1.18E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_10585 4fe1aa23df87c437cea4275833953edc 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 604 7.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_10585 4fe1aa23df87c437cea4275833953edc 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 645 7.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_10585 4fe1aa23df87c437cea4275833953edc 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 590 7.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_10585 4fe1aa23df87c437cea4275833953edc 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 625 7.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_10585 4fe1aa23df87c437cea4275833953edc 665 Gene3D G3DSA:3.30.450.20 36 171 1.9E-6 T 14-10-2018 C3497_10585 4fe1aa23df87c437cea4275833953edc 665 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 538 646 3.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_10585 4fe1aa23df87c437cea4275833953edc 665 SMART SM00387 535 648 3.3E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_10585 4fe1aa23df87c437cea4275833953edc 665 Gene3D G3DSA:1.10.287.130 386 485 6.0E-16 T 14-10-2018 C3497_05725 6759915277443124106be92e779d6f98 271 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 266 1.3E-112 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C3497_05725 6759915277443124106be92e779d6f98 271 SUPERFAMILY SSF51621 10 271 1.22E-104 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3497_05725 6759915277443124106be92e779d6f98 271 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 14 271 4.1E-99 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C3497_05725 6759915277443124106be92e779d6f98 271 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 271 44.004 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C3497_05725 6759915277443124106be92e779d6f98 271 PIRSF PIRSF000388 1 271 9.2E-105 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C3497_05725 6759915277443124106be92e779d6f98 271 Gene3D G3DSA:3.20.20.60 8 271 1.9E-113 T 14-10-2018 C3497_00015 36c2b6038e213876729a0b7f1681d442 220 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 11 220 2.1E-108 T 14-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE C3497_00015 36c2b6038e213876729a0b7f1681d442 220 Pfam PF04055 Radical SAM superfamily 34 123 4.3E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_00015 36c2b6038e213876729a0b7f1681d442 220 PIRSF PIRSF000370 9 220 2.0E-69 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 C3497_00015 36c2b6038e213876729a0b7f1681d442 220 Pfam PF13394 4Fe-4S single cluster domain 32 115 8.8E-10 T 14-10-2018 C3497_00015 36c2b6038e213876729a0b7f1681d442 220 SUPERFAMILY SSF102114 32 112 5.23E-13 T 14-10-2018 C3497_00015 36c2b6038e213876729a0b7f1681d442 220 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 11 217 36.821 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 C3497_00015 36c2b6038e213876729a0b7f1681d442 220 Gene3D G3DSA:3.20.20.70 11 214 4.0E-36 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_11595 f90978e3eb949d2502a577a89007c117 158 Gene3D G3DSA:1.10.10.2830 76 140 2.2E-5 T 14-10-2018 C3497_11595 f90978e3eb949d2502a577a89007c117 158 SUPERFAMILY SSF109709 76 134 1.26E-8 T 14-10-2018 C3497_10350 2ebf129874cb09ef5e7b7e02ce068bb9 274 Gene3D G3DSA:3.40.50.1820 6 188 8.5E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_10350 2ebf129874cb09ef5e7b7e02ce068bb9 274 TIGRFAM TIGR03101 hydr2_PEP: exosortase A system-associated hydrolase 2 8 269 2.4E-81 T 14-10-2018 IPR017532 Hydrolase, ortholog 2, exosortase system type 1 associated C3497_10350 2ebf129874cb09ef5e7b7e02ce068bb9 274 Pfam PF12146 Serine aminopeptidase, S33 45 142 7.7E-8 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 C3497_10350 2ebf129874cb09ef5e7b7e02ce068bb9 274 SUPERFAMILY SSF53474 3 125 1.86E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_04210 e8f745c9b866c696093473c870ce9e56 146 SUPERFAMILY SSF46785 6 133 2.91E-41 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_04210 e8f745c9b866c696093473c870ce9e56 146 Gene3D G3DSA:3.30.1490.190 86 142 8.4E-22 T 14-10-2018 C3497_04210 e8f745c9b866c696093473c870ce9e56 146 Gene3D G3DSA:1.10.10.10 1 84 5.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_04210 e8f745c9b866c696093473c870ce9e56 146 Pfam PF01475 Ferric uptake regulator family 12 130 8.0E-45 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 C3497_14350 f4afab64eb29ddbb25c921afe366e14a 485 Pfam PF02386 Cation transport protein 44 477 5.3E-65 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 C3497_14350 f4afab64eb29ddbb25c921afe366e14a 485 PIRSF PIRSF006247 1 485 1.7E-161 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 C3497_06700 fc4f25ee9096599c2a9c02bffe67eda7 260 Pfam PF13616 PPIC-type PPIASE domain 142 222 1.6E-21 T 14-10-2018 C3497_06700 fc4f25ee9096599c2a9c02bffe67eda7 260 SUPERFAMILY SSF54534 132 220 3.21E-26 T 14-10-2018 C3497_06700 fc4f25ee9096599c2a9c02bffe67eda7 260 Gene3D G3DSA:3.10.50.40 127 247 6.0E-30 T 14-10-2018 C3497_06700 fc4f25ee9096599c2a9c02bffe67eda7 260 SUPERFAMILY SSF109998 26 161 4.32E-20 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C3497_10620 b06e444f6459fe41c31427d8e63c656d 346 Pfam PF00591 Glycosyl transferase family, a/b domain 78 328 2.1E-94 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3497_10620 b06e444f6459fe41c31427d8e63c656d 346 Gene3D G3DSA:1.20.970.10 1 72 8.0E-31 T 14-10-2018 C3497_10620 b06e444f6459fe41c31427d8e63c656d 346 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 338 36.922 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 C3497_10620 b06e444f6459fe41c31427d8e63c656d 346 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 66 4.2E-11 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3497_10620 b06e444f6459fe41c31427d8e63c656d 346 SUPERFAMILY SSF52418 78 341 3.79E-98 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3497_10620 b06e444f6459fe41c31427d8e63c656d 346 Gene3D G3DSA:3.40.1030.10 76 345 1.6E-107 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3497_10620 b06e444f6459fe41c31427d8e63c656d 346 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 337 2.1E-123 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 C3497_10620 b06e444f6459fe41c31427d8e63c656d 346 SUPERFAMILY SSF47648 4 71 3.01E-16 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3497_01425 0a5be6b296c163cdb0760c9f3c7b0136 240 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 46 218 1.3E-45 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG C3497_01425 0a5be6b296c163cdb0760c9f3c7b0136 240 Pfam PF03641 Possible lysine decarboxylase 88 218 4.1E-33 T 14-10-2018 IPR031100 LOG family C3497_01425 0a5be6b296c163cdb0760c9f3c7b0136 240 Gene3D G3DSA:3.40.50.450 23 222 2.2E-65 T 14-10-2018 C3497_01425 0a5be6b296c163cdb0760c9f3c7b0136 240 SUPERFAMILY SSF102405 18 219 3.36E-62 T 14-10-2018 C3497_08425 5eb625d7cc6b4d096e90cee2c8ce7e17 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 3.2E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C3497_08425 5eb625d7cc6b4d096e90cee2c8ce7e17 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 3.2E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C3497_08425 5eb625d7cc6b4d096e90cee2c8ce7e17 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 3.2E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C3497_08425 5eb625d7cc6b4d096e90cee2c8ce7e17 169 SMART SM00347 39 139 1.9E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C3497_08425 5eb625d7cc6b4d096e90cee2c8ce7e17 169 SUPERFAMILY SSF46785 20 158 4.14E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_08425 5eb625d7cc6b4d096e90cee2c8ce7e17 169 ProSitePatterns PS01117 MarR-type HTH domain signature. 78 112 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site C3497_08425 5eb625d7cc6b4d096e90cee2c8ce7e17 169 Gene3D G3DSA:1.10.10.10 13 156 5.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_08425 5eb625d7cc6b4d096e90cee2c8ce7e17 169 Pfam PF12802 MarR family 44 102 1.1E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C3497_03300 3344082716508a3c74b07e151e87835c 102 Gene3D G3DSA:3.30.1390.10 1 102 1.0E-42 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C3497_03300 3344082716508a3c74b07e151e87835c 102 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 2 97 29.359 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS C3497_03300 3344082716508a3c74b07e151e87835c 102 SUPERFAMILY SSF54736 17 101 3.14E-33 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C3497_03300 3344082716508a3c74b07e151e87835c 102 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 20 97 3.9E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 SMART SM01230 102 379 2.5E-148 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 4.2E-203 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 SUPERFAMILY SSF55931 102 468 5.0E-139 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.5E-29 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 Gene3D G3DSA:3.30.590.10 105 457 2.4E-148 T 14-10-2018 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 Gene3D G3DSA:3.10.20.70 2 104 3.0E-37 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.4E-139 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3497_02330 7e40d2745014bd9943c78ccd4168189e 469 SUPERFAMILY SSF54368 3 99 5.49E-35 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3497_08390 5f4b97d6a42a32ceb81c0d3f7b0aa2ac 116 SUPERFAMILY SSF46626 9 111 2.72E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08390 5f4b97d6a42a32ceb81c0d3f7b0aa2ac 116 Gene3D G3DSA:1.10.760.10 34 110 4.1E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08390 5f4b97d6a42a32ceb81c0d3f7b0aa2ac 116 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 41 105 3.8E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_10480 5b36b79c5f3ab9c4c6251025570fcaed 535 TIGRFAM TIGR03016 pepcterm_hypo_1: uncharacterized protein, PEP-CTERM system associated 59 535 3.0E-97 T 14-10-2018 IPR017467 Conserved hypothetical protein CHP03016, PEP-CTERM C3497_06655 da904c3f40ce736fbe84ab14221d1ee5 209 SUPERFAMILY SSF49777 1 203 2.35E-45 T 14-10-2018 IPR036610 PEBP-like superfamily C3497_06655 da904c3f40ce736fbe84ab14221d1ee5 209 Gene3D G3DSA:3.90.280.10 1 202 1.1E-49 T 14-10-2018 IPR036610 PEBP-like superfamily C3497_06655 da904c3f40ce736fbe84ab14221d1ee5 209 Pfam PF01161 Phosphatidylethanolamine-binding protein 31 201 1.6E-39 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein C3497_06655 da904c3f40ce736fbe84ab14221d1ee5 209 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 25 201 7.5E-27 T 14-10-2018 IPR005247 YbhB/YbcL C3497_06980 f9e4cc48eaa3702a48c7fe2c36e582f9 112 Pfam PF01934 Protein of unknown function DUF86 13 110 5.6E-25 T 14-10-2018 IPR008201 Protein of unknown function DUF86 C3497_04590 887a86db40caa534a0c5f0e9846f7c82 418 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 32 48 3.3E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_04590 887a86db40caa534a0c5f0e9846f7c82 418 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 292 305 3.3E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_04590 887a86db40caa534a0c5f0e9846f7c82 418 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 54 70 3.3E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 C3497_04590 887a86db40caa534a0c5f0e9846f7c82 418 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 32 406 6.2E-180 T 14-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like C3497_04590 887a86db40caa534a0c5f0e9846f7c82 418 SUPERFAMILY SSF53822 31 410 3.93E-92 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C3497_04590 887a86db40caa534a0c5f0e9846f7c82 418 Pfam PF13433 Periplasmic binding protein domain 32 409 3.5E-172 T 14-10-2018 C3497_04590 887a86db40caa534a0c5f0e9846f7c82 418 Gene3D G3DSA:3.40.50.2300 34 377 2.5E-140 T 14-10-2018 C3497_04590 887a86db40caa534a0c5f0e9846f7c82 418 Gene3D G3DSA:3.40.50.2300 147 397 2.5E-140 T 14-10-2018 C3497_03585 daba386ed068fb5b7481aa006e512c97 148 Gene3D G3DSA:2.30.30.40 80 143 1.0E-5 T 14-10-2018 C3497_03585 daba386ed068fb5b7481aa006e512c97 148 Pfam PF06347 Bacterial SH3 domain 92 147 1.2E-10 T 14-10-2018 IPR010466 Protein of unknown function DUF1058 C3497_03585 daba386ed068fb5b7481aa006e512c97 148 Pfam PF06347 Bacterial SH3 domain 32 82 1.9E-12 T 14-10-2018 IPR010466 Protein of unknown function DUF1058 C3497_10785 2cda6856aa52698647621b25c7845bc3 158 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 9 151 6.1E-27 T 14-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_10785 2cda6856aa52698647621b25c7845bc3 158 Pfam PF06754 Phosphonate metabolism protein PhnG 9 149 5.0E-26 T 14-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3497_07920 9ffcc4e6c8d23c7039bfeef679d3c0d1 85 SUPERFAMILY SSF54285 4 85 2.43E-21 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp C3497_07920 9ffcc4e6c8d23c7039bfeef679d3c0d1 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 5 85 1.3E-23 T 14-10-2018 C3497_07920 9ffcc4e6c8d23c7039bfeef679d3c0d1 85 Gene3D G3DSA:3.10.20.30 4 85 3.6E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3497_07920 9ffcc4e6c8d23c7039bfeef679d3c0d1 85 Pfam PF02597 ThiS family 6 85 1.2E-19 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 C3497_12385 4c1939d88ebfd34a44f0d472476d5ab3 438 SUPERFAMILY SSF56954 2 426 1.31E-87 T 14-10-2018 C3497_12385 4c1939d88ebfd34a44f0d472476d5ab3 438 Pfam PF02321 Outer membrane efflux protein 22 210 8.4E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_12385 4c1939d88ebfd34a44f0d472476d5ab3 438 Pfam PF02321 Outer membrane efflux protein 234 421 2.3E-29 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_12385 4c1939d88ebfd34a44f0d472476d5ab3 438 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 435 1.5E-95 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 C3497_12385 4c1939d88ebfd34a44f0d472476d5ab3 438 Gene3D G3DSA:1.20.1600.10 20 438 1.6E-113 T 14-10-2018 C3497_08400 4696dc06de5ed6891e9eb95da417f271 187 Pfam PF01169 Uncharacterized protein family UPF0016 104 178 3.2E-22 T 14-10-2018 IPR001727 Gdt1 family C3497_08400 4696dc06de5ed6891e9eb95da417f271 187 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.3E-18 T 14-10-2018 IPR001727 Gdt1 family C3497_09500 f21862d0eab26083371b7f0de74d836f 174 Gene3D G3DSA:3.10.20.80 3 77 5.1E-33 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C3497_09500 f21862d0eab26083371b7f0de74d836f 174 SUPERFAMILY SSF55200 85 172 1.7E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 C3497_09500 f21862d0eab26083371b7f0de74d836f 174 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 78 1.7E-31 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C3497_09500 f21862d0eab26083371b7f0de74d836f 174 Gene3D G3DSA:3.30.110.10 78 173 6.6E-38 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 C3497_09500 f21862d0eab26083371b7f0de74d836f 174 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 172 1.3E-68 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C3497_09500 f21862d0eab26083371b7f0de74d836f 174 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 172 31.495 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C3497_09500 f21862d0eab26083371b7f0de74d836f 174 SUPERFAMILY SSF54364 7 79 1.06E-28 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C3497_09500 f21862d0eab26083371b7f0de74d836f 174 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 C3497_09500 f21862d0eab26083371b7f0de74d836f 174 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 169 7.1E-39 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 C3497_03310 f3a22a9d76ece203e4f1136ee1f67c88 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.704 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_03310 f3a22a9d76ece203e4f1136ee1f67c88 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_03310 f3a22a9d76ece203e4f1136ee1f67c88 55 Gene3D G3DSA:2.20.28.120 1 55 1.2E-30 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_03310 f3a22a9d76ece203e4f1136ee1f67c88 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 5.7E-26 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_03310 f3a22a9d76ece203e4f1136ee1f67c88 55 SUPERFAMILY SSF57829 1 53 2.26E-20 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 C3497_03310 f3a22a9d76ece203e4f1136ee1f67c88 55 Pfam PF00471 Ribosomal protein L33 7 53 6.6E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_12680 316bd197e10423efc051129639a103b6 138 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 104 5.1E-24 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like C3497_00810 27f85190239b352eb9baf3738ee4f538 334 Gene3D G3DSA:1.20.1260.10 23 332 1.3E-133 T 14-10-2018 IPR012347 Ferritin-like C3497_00810 27f85190239b352eb9baf3738ee4f538 334 SUPERFAMILY SSF47240 50 292 1.93E-84 T 14-10-2018 IPR009078 Ferritin-like superfamily C3497_00810 27f85190239b352eb9baf3738ee4f538 334 Pfam PF05138 Phenylacetic acid catabolic protein 40 314 1.9E-104 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 C3497_00810 27f85190239b352eb9baf3738ee4f538 334 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 30 318 6.9E-166 T 14-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 C3497_09990 8fb439d9be0bb640eedcb1da8a487271 49 Pfam PF11346 Protein of unknown function (DUF3149) 4 41 1.0E-15 T 14-10-2018 IPR021494 Protein of unknown function DUF3149 C3497_06990 267cfff22f0b532672a608d575c997ae 629 SUPERFAMILY SSF53335 86 454 3.51E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_06990 267cfff22f0b532672a608d575c997ae 629 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3497_06990 267cfff22f0b532672a608d575c997ae 629 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 117 129 6.9E-13 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 C3497_06990 267cfff22f0b532672a608d575c997ae 629 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 186 205 6.9E-13 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 C3497_06990 267cfff22f0b532672a608d575c997ae 629 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 395 417 6.9E-13 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 C3497_06990 267cfff22f0b532672a608d575c997ae 629 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 420 434 6.9E-13 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 C3497_06990 267cfff22f0b532672a608d575c997ae 629 PIRSF PIRSF015855 9 628 4.4E-150 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 C3497_06990 267cfff22f0b532672a608d575c997ae 629 Pfam PF01555 DNA methylase 117 439 7.7E-38 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 C3497_13495 35e487593a1a73b63e403417cdba8b42 783 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 164 6.3E-29 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_13495 35e487593a1a73b63e403417cdba8b42 783 Gene3D G3DSA:2.170.130.10 32 169 6.5E-41 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_13495 35e487593a1a73b63e403417cdba8b42 783 Pfam PF00593 TonB dependent receptor 280 781 1.0E-56 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_13495 35e487593a1a73b63e403417cdba8b42 783 SUPERFAMILY SSF56935 38 783 1.05E-128 T 14-10-2018 C3497_13560 73dc7b49e88b11009dd834155e0d4275 213 Pfam PF00753 Metallo-beta-lactamase superfamily 10 193 2.5E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_13560 73dc7b49e88b11009dd834155e0d4275 213 SMART SM00849 13 193 1.1E-42 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_13560 73dc7b49e88b11009dd834155e0d4275 213 Gene3D G3DSA:3.60.15.10 2 211 7.6E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_13560 73dc7b49e88b11009dd834155e0d4275 213 SUPERFAMILY SSF56281 3 209 7.08E-62 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_10345 e4c28769180b987cafc9f9b883261563 297 TIGRFAM TIGR03100 hydr1_PEP: exosortase A system-associated hydrolase 1 5 279 6.6E-94 T 14-10-2018 IPR017531 Hydrolase, ortholog 1, exosortase system type 1 associated C3497_10345 e4c28769180b987cafc9f9b883261563 297 Pfam PF12697 Alpha/beta hydrolase family 33 260 1.7E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3497_10345 e4c28769180b987cafc9f9b883261563 297 Gene3D G3DSA:3.40.50.1820 11 287 2.5E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_10345 e4c28769180b987cafc9f9b883261563 297 SUPERFAMILY SSF53474 13 282 3.52E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_08895 161a1478ebdd99fcd49911bf551923c9 141 SUPERFAMILY SSF46626 45 137 7.3E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_08895 161a1478ebdd99fcd49911bf551923c9 141 Pfam PF00034 Cytochrome c 49 126 1.3E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_08895 161a1478ebdd99fcd49911bf551923c9 141 Gene3D G3DSA:1.10.760.10 1 141 1.3E-40 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_12260 32c296c25b8fe90b10fa5ed098254ed1 149 Pfam PF00364 Biotin-requiring enzyme 75 148 4.8E-26 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3497_12260 32c296c25b8fe90b10fa5ed098254ed1 149 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 105 122 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3497_12260 32c296c25b8fe90b10fa5ed098254ed1 149 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 148 1.2E-54 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C3497_12260 32c296c25b8fe90b10fa5ed098254ed1 149 SUPERFAMILY SSF51230 74 148 2.49E-26 T 14-10-2018 IPR011053 Single hybrid motif C3497_12260 32c296c25b8fe90b10fa5ed098254ed1 149 Gene3D G3DSA:2.40.50.100 71 148 2.0E-33 T 14-10-2018 C3497_12260 32c296c25b8fe90b10fa5ed098254ed1 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 95 109 9.4E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C3497_12260 32c296c25b8fe90b10fa5ed098254ed1 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 110 123 9.4E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C3497_12260 32c296c25b8fe90b10fa5ed098254ed1 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 78 91 9.4E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C3497_08380 2d718f7e1f0506d259958ba469395f8c 196 Gene3D G3DSA:1.20.1440.20 14 195 3.8E-65 T 14-10-2018 IPR023353 LemA-like domain superfamily C3497_08380 2d718f7e1f0506d259958ba469395f8c 196 Pfam PF04011 LemA family 6 195 3.0E-71 T 14-10-2018 IPR007156 LemA C3497_08380 2d718f7e1f0506d259958ba469395f8c 196 SUPERFAMILY SSF140478 25 183 1.44E-57 T 14-10-2018 IPR023353 LemA-like domain superfamily C3497_09420 0e7731e23b2cab1758b126acc96984fe 308 Pfam PF00850 Histone deacetylase domain 21 305 3.5E-78 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C3497_09420 0e7731e23b2cab1758b126acc96984fe 308 SUPERFAMILY SSF52768 2 307 1.25E-102 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily C3497_09420 0e7731e23b2cab1758b126acc96984fe 308 Gene3D G3DSA:3.40.800.20 1 308 8.3E-117 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C3497_09420 0e7731e23b2cab1758b126acc96984fe 308 PRINTS PR01270 Histone deacetylase superfamily signature 123 146 8.7E-18 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C3497_09420 0e7731e23b2cab1758b126acc96984fe 308 PRINTS PR01270 Histone deacetylase superfamily signature 235 245 8.7E-18 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C3497_09420 0e7731e23b2cab1758b126acc96984fe 308 PRINTS PR01270 Histone deacetylase superfamily signature 157 172 8.7E-18 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C3497_10230 05840cae3ff0e81aaab64b8a6754d3b5 197 SMART SM01207 8 185 3.5E-83 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 C3497_10230 05840cae3ff0e81aaab64b8a6754d3b5 197 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 193 1.1E-57 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 C3497_10230 05840cae3ff0e81aaab64b8a6754d3b5 197 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 184 1.3E-51 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 C3497_10230 05840cae3ff0e81aaab64b8a6754d3b5 197 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 193 20.225 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 C3497_04830 4550eb252b29168cb921e5e9c78963b8 265 SMART SM00052 7 253 5.4E-63 T 14-10-2018 IPR001633 EAL domain C3497_04830 4550eb252b29168cb921e5e9c78963b8 265 SUPERFAMILY SSF141868 14 260 6.67E-67 T 14-10-2018 IPR035919 EAL domain superfamily C3497_04830 4550eb252b29168cb921e5e9c78963b8 265 Gene3D G3DSA:3.20.20.450 9 261 3.4E-73 T 14-10-2018 IPR035919 EAL domain superfamily C3497_04830 4550eb252b29168cb921e5e9c78963b8 265 Pfam PF00563 EAL domain 14 248 1.8E-58 T 14-10-2018 IPR001633 EAL domain C3497_01315 3d2b7f010baf5bf72338b742ef8319fd 306 PIRSF PIRSF026649 3 306 8.8E-93 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C3497_01315 3d2b7f010baf5bf72338b742ef8319fd 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 297 3.1E-63 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C3497_09125 57cc02f7333d2b11037f255aee4afd32 240 Pfam PF07730 Histidine kinase 28 92 1.6E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 C3497_09125 57cc02f7333d2b11037f255aee4afd32 240 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 135 223 3.7E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_09125 57cc02f7333d2b11037f255aee4afd32 240 SMART SM00387 131 225 3.7E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_09125 57cc02f7333d2b11037f255aee4afd32 240 SUPERFAMILY SSF55874 105 223 2.23E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_09125 57cc02f7333d2b11037f255aee4afd32 240 Gene3D G3DSA:3.30.565.10 102 223 1.3E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_03355 ad4c2b212a2a7ac7de1a4c0f5921e488 99 Gene3D G3DSA:2.60.40.10 1 99 2.1E-34 T 14-10-2018 IPR013783 Immunoglobulin-like fold C3497_03355 ad4c2b212a2a7ac7de1a4c0f5921e488 99 SUPERFAMILY SSF81296 2 98 4.2E-31 T 14-10-2018 IPR014756 Immunoglobulin E-set C3497_03355 ad4c2b212a2a7ac7de1a4c0f5921e488 99 Pfam PF08770 Sulphur oxidation protein SoxZ 3 96 6.3E-36 T 14-10-2018 IPR014880 Sulphur oxidation protein SoxZ C3497_03355 ad4c2b212a2a7ac7de1a4c0f5921e488 99 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 2 98 1.5E-37 T 14-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ C3497_13830 b687fe01da32540577df67338b1d49c8 209 Gene3D G3DSA:3.40.50.10230 2 209 1.3E-77 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 C3497_13830 b687fe01da32540577df67338b1d49c8 209 Pfam PF02570 Precorrin-8X methylmutase 12 206 1.1E-67 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 C3497_13830 b687fe01da32540577df67338b1d49c8 209 SUPERFAMILY SSF63965 3 206 7.72E-68 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 C3497_14530 63f35bd861340a0dd8218fd1ef0a374a 384 Gene3D G3DSA:3.40.50.300 16 215 7.4E-57 T 14-10-2018 C3497_14530 63f35bd861340a0dd8218fd1ef0a374a 384 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 20 201 9.0E-44 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain C3497_14530 63f35bd861340a0dd8218fd1ef0a374a 384 SUPERFAMILY SSF90002 276 371 1.44E-17 T 14-10-2018 C3497_14530 63f35bd861340a0dd8218fd1ef0a374a 384 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 276 372 1.4E-17 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal C3497_14530 63f35bd861340a0dd8218fd1ef0a374a 384 Gene3D G3DSA:3.30.1220.10 261 374 1.7E-19 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily C3497_14530 63f35bd861340a0dd8218fd1ef0a374a 384 SMART SM00833 276 374 5.8E-26 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal C3497_14530 63f35bd861340a0dd8218fd1ef0a374a 384 SUPERFAMILY SSF52540 17 202 8.53E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02255 092a5dadd51b0c901fbcfaec5ba2a35f 390 Gene3D G3DSA:3.50.50.60 7 335 9.6E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02255 092a5dadd51b0c901fbcfaec5ba2a35f 390 Gene3D G3DSA:3.30.9.50 79 267 9.6E-98 T 14-10-2018 C3497_02255 092a5dadd51b0c901fbcfaec5ba2a35f 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 7.8E-20 T 14-10-2018 C3497_02255 092a5dadd51b0c901fbcfaec5ba2a35f 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 7.8E-20 T 14-10-2018 C3497_02255 092a5dadd51b0c901fbcfaec5ba2a35f 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 7.8E-20 T 14-10-2018 C3497_02255 092a5dadd51b0c901fbcfaec5ba2a35f 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 7.8E-20 T 14-10-2018 C3497_02255 092a5dadd51b0c901fbcfaec5ba2a35f 390 SUPERFAMILY SSF51905 6 381 1.43E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_02255 092a5dadd51b0c901fbcfaec5ba2a35f 390 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 386 8.7E-117 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 C3497_02255 092a5dadd51b0c901fbcfaec5ba2a35f 390 Pfam PF01494 FAD binding domain 8 336 7.0E-23 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 C3497_02485 1282aa62cce160216fb44dadbe6655a2 387 Pfam PF04326 Putative DNA-binding domain 14 127 9.6E-21 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 C3497_02485 1282aa62cce160216fb44dadbe6655a2 387 Gene3D G3DSA:3.30.950.30 2 126 2.6E-21 T 14-10-2018 IPR038461 Schlafen, AAA domain superfamily C3497_02485 1282aa62cce160216fb44dadbe6655a2 387 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 297 361 4.8E-14 T 14-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain C3497_02485 1282aa62cce160216fb44dadbe6655a2 387 Gene3D G3DSA:3.30.565.60 219 379 2.4E-30 T 14-10-2018 IPR038475 RecG, C-terminal domain superfamily C3497_12210 4f9796001ae38e91bac5bf79fc90b217 214 Pfam PF04972 BON domain 131 195 5.0E-14 T 14-10-2018 IPR007055 BON domain C3497_12210 4f9796001ae38e91bac5bf79fc90b217 214 Pfam PF04972 BON domain 65 121 4.9E-12 T 14-10-2018 IPR007055 BON domain C3497_12210 4f9796001ae38e91bac5bf79fc90b217 214 SMART SM00749 136 199 5.9E-8 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria C3497_12210 4f9796001ae38e91bac5bf79fc90b217 214 SMART SM00749 58 121 0.02 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria C3497_05380 ff4741e7cb583178164b211a5417ef9b 422 SUPERFAMILY SSF47384 199 264 1.22E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3497_05380 ff4741e7cb583178164b211a5417ef9b 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 418 4.9E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_05380 ff4741e7cb583178164b211a5417ef9b 422 Gene3D G3DSA:1.10.287.130 185 266 2.3E-5 T 14-10-2018 C3497_05380 ff4741e7cb583178164b211a5417ef9b 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 1.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05380 ff4741e7cb583178164b211a5417ef9b 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05380 ff4741e7cb583178164b211a5417ef9b 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 1.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3497_05380 ff4741e7cb583178164b211a5417ef9b 422 SMART SM00387 315 419 2.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3497_05380 ff4741e7cb583178164b211a5417ef9b 422 Gene3D G3DSA:3.30.565.10 280 421 2.8E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_05380 ff4741e7cb583178164b211a5417ef9b 422 SUPERFAMILY SSF55874 285 417 1.25E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3497_06895 377d60559aaeb014f684bc65c4207459 242 PIRSF PIRSF004808 5 242 3.1E-71 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 C3497_06895 377d60559aaeb014f684bc65c4207459 242 SUPERFAMILY SSF75217 9 190 4.51E-35 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3497_06895 377d60559aaeb014f684bc65c4207459 242 Gene3D G3DSA:1.10.8.590 177 239 8.4E-25 T 14-10-2018 C3497_06895 377d60559aaeb014f684bc65c4207459 242 Pfam PF00588 SpoU rRNA Methylase family 10 159 7.6E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C3497_06895 377d60559aaeb014f684bc65c4207459 242 Gene3D G3DSA:3.40.1280.10 5 170 1.1E-61 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3497_06895 377d60559aaeb014f684bc65c4207459 242 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 8 240 1.4E-62 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 C3497_13515 ef83f419bd841c043a2d4c145438e2fa 138 SUPERFAMILY SSF46785 9 132 5.61E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_13515 ef83f419bd841c043a2d4c145438e2fa 138 Pfam PF01475 Ferric uptake regulator family 16 112 1.3E-19 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 C3497_13515 ef83f419bd841c043a2d4c145438e2fa 138 Gene3D G3DSA:1.10.10.10 3 86 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_06190 623fa1a0fce81563b8784e3326d6f05d 154 PIRSF PIRSF004923 10 151 7.3E-20 T 14-10-2018 IPR026268 Protein RseC C3497_06190 623fa1a0fce81563b8784e3326d6f05d 154 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 17 141 7.9E-24 T 14-10-2018 C3497_02245 34511094449ceb21b7b0412385fa5e46 218 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 208 23.911 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3497_02245 34511094449ceb21b7b0412385fa5e46 218 Gene3D G3DSA:3.20.20.70 2 208 9.1E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_02245 34511094449ceb21b7b0412385fa5e46 218 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 201 2.2E-50 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3497_02245 34511094449ceb21b7b0412385fa5e46 218 Pfam PF02581 Thiamine monophosphate synthase 10 190 3.8E-49 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3497_02245 34511094449ceb21b7b0412385fa5e46 218 SUPERFAMILY SSF51391 6 204 2.62E-55 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3497_07480 f0687fdf5a4dce93c4b4f62754ee4825 178 Gene3D G3DSA:3.90.1720.10 18 168 1.8E-37 T 14-10-2018 C3497_07480 f0687fdf5a4dce93c4b4f62754ee4825 178 SUPERFAMILY SSF54001 48 172 2.8E-35 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily C3497_07480 f0687fdf5a4dce93c4b4f62754ee4825 178 Pfam PF00877 NlpC/P60 family 68 171 8.3E-24 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain C3497_10795 4f6d43f6afebf7d075b39815152fce45 374 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 2 361 8.4E-147 T 14-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 C3497_10795 4f6d43f6afebf7d075b39815152fce45 374 PIRSF PIRSF007313 1 371 1.3E-159 T 14-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 C3497_04985 929f71eaaa1352b99c421e5cbc98c640 512 Pfam PF04293 SpoVR like protein 17 448 2.4E-176 T 14-10-2018 IPR007390 Sporulation stage V, protein R C3497_12475 834bc2e994b3015848324f772617b6f0 289 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 205 268 6.0E-13 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 C3497_12475 834bc2e994b3015848324f772617b6f0 289 SUPERFAMILY SSF74653 177 284 1.7E-22 T 14-10-2018 C3497_12475 834bc2e994b3015848324f772617b6f0 289 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 205 281 3.0E-15 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C3497_05245 04a73f11dca42d5e5559ae98deb5bcf5 180 Gene3D G3DSA:3.40.50.850 2 179 2.0E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C3497_05245 04a73f11dca42d5e5559ae98deb5bcf5 180 SUPERFAMILY SSF52499 1 176 2.88E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C3497_05245 04a73f11dca42d5e5559ae98deb5bcf5 180 Pfam PF00857 Isochorismatase family 10 156 2.9E-24 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 C3497_11060 036d86e7770c8cf2537858a3f837798a 239 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 43 237 3.2E-88 T 14-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 C3497_06315 66c3d757ee1e507d4b6e2bcb25a57e97 303 Pfam PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) 46 298 3.6E-87 T 14-10-2018 IPR009953 Dinitrogenase reductase ADP-ribosyltransferase GO:0009399|GO:0030701 C3497_02715 e198841e499ead2872eed0a62632859c 370 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 364 1.7E-157 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3497_02715 e198841e499ead2872eed0a62632859c 370 SUPERFAMILY SSF51713 1 363 1.57E-160 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3497_02715 e198841e499ead2872eed0a62632859c 370 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 364 3.4E-166 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3497_02715 e198841e499ead2872eed0a62632859c 370 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 55.972 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3497_02715 e198841e499ead2872eed0a62632859c 370 Gene3D G3DSA:3.20.20.105 1 368 2.7E-166 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3497_02715 e198841e499ead2872eed0a62632859c 370 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 361 3.6E-92 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3497_10615 17f01abb405742176cb3d60a8177c574 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 35.809 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 C3497_10615 17f01abb405742176cb3d60a8177c574 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 C3497_10615 17f01abb405742176cb3d60a8177c574 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 2.2E-92 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 C3497_10615 17f01abb405742176cb3d60a8177c574 262 SUPERFAMILY SSF51366 12 261 4.12E-86 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3497_10615 17f01abb405742176cb3d60a8177c574 262 Gene3D G3DSA:3.20.20.70 1 262 1.3E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_12715 0e74b35abf61933450ce43153ecdf4f0 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 230 254 3.0E-14 T 14-10-2018 C3497_12715 0e74b35abf61933450ce43153ecdf4f0 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 94 114 3.0E-14 T 14-10-2018 C3497_12715 0e74b35abf61933450ce43153ecdf4f0 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 163 187 3.0E-14 T 14-10-2018 C3497_12715 0e74b35abf61933450ce43153ecdf4f0 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 116 137 3.0E-14 T 14-10-2018 C3497_12715 0e74b35abf61933450ce43153ecdf4f0 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 3.0E-14 T 14-10-2018 C3497_12715 0e74b35abf61933450ce43153ecdf4f0 391 Gene3D G3DSA:3.40.640.10 4 391 1.4E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_12715 0e74b35abf61933450ce43153ecdf4f0 391 Pfam PF00155 Aminotransferase class I and II 33 385 8.7E-60 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3497_12715 0e74b35abf61933450ce43153ecdf4f0 391 SUPERFAMILY SSF53383 6 390 1.09E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_12715 0e74b35abf61933450ce43153ecdf4f0 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 C3497_07850 cac80a3316243a8c793d1fcb798529bb 24 Pfam PF08042 PqqA family 2 20 6.1E-10 T 14-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 C3497_07850 cac80a3316243a8c793d1fcb798529bb 24 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 3 23 5.3E-8 T 14-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 C3497_07210 d70f3bd7eb25b5a4b6714a832b62214c 237 Gene3D G3DSA:3.40.50.300 48 160 1.8E-39 T 14-10-2018 C3497_07210 d70f3bd7eb25b5a4b6714a832b62214c 237 Pfam PF03846 Cell division inhibitor SulA 58 133 4.2E-7 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 C3497_07210 d70f3bd7eb25b5a4b6714a832b62214c 237 SUPERFAMILY SSF52540 47 161 3.25E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_07210 d70f3bd7eb25b5a4b6714a832b62214c 237 PIRSF PIRSF037290 4 232 3.1E-68 T 14-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 C3497_02590 f5edbdb616ad8df06b8f8c6cfd43ea9c 449 Pfam PF05193 Peptidase M16 inactive domain 194 369 2.3E-35 T 14-10-2018 IPR007863 Peptidase M16, C-terminal C3497_02590 f5edbdb616ad8df06b8f8c6cfd43ea9c 449 Gene3D G3DSA:3.30.830.10 31 240 5.1E-48 T 14-10-2018 C3497_02590 f5edbdb616ad8df06b8f8c6cfd43ea9c 449 Pfam PF00675 Insulinase (Peptidase family M16) 49 183 9.5E-10 T 14-10-2018 IPR011765 Peptidase M16, N-terminal C3497_02590 f5edbdb616ad8df06b8f8c6cfd43ea9c 449 SUPERFAMILY SSF63411 23 247 4.37E-45 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3497_02590 f5edbdb616ad8df06b8f8c6cfd43ea9c 449 SUPERFAMILY SSF63411 246 440 9.0E-46 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3497_02590 f5edbdb616ad8df06b8f8c6cfd43ea9c 449 Gene3D G3DSA:3.30.830.10 245 437 2.6E-55 T 14-10-2018 C3497_14285 5775fc624127babba90706a9fb4789b1 345 Pfam PF01384 Phosphate transporter family 22 331 3.7E-76 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 C3497_11375 5cb07871b694afff539de4dcec9416ef 115 PRINTS PR00332 Histidine triad family signature 26 44 1.9E-21 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3497_11375 5cb07871b694afff539de4dcec9416ef 115 PRINTS PR00332 Histidine triad family signature 93 103 1.9E-21 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3497_11375 5cb07871b694afff539de4dcec9416ef 115 PRINTS PR00332 Histidine triad family signature 5 21 1.9E-21 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3497_11375 5cb07871b694afff539de4dcec9416ef 115 SUPERFAMILY SSF54197 1 107 4.02E-41 T 14-10-2018 IPR036265 HIT-like superfamily C3497_11375 5cb07871b694afff539de4dcec9416ef 115 Gene3D G3DSA:3.30.428.10 1 108 3.0E-43 T 14-10-2018 IPR036265 HIT-like superfamily C3497_11375 5cb07871b694afff539de4dcec9416ef 115 Pfam PF01230 HIT domain 12 105 2.0E-28 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3497_11375 5cb07871b694afff539de4dcec9416ef 115 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 14-10-2018 IPR019808 Histidine triad, conserved site C3497_11850 fd85efb7d42b7b4512ee66f7a67dad2d 253 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 208 219 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 C3497_11850 fd85efb7d42b7b4512ee66f7a67dad2d 253 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 251 7.4E-78 T 14-10-2018 C3497_11850 fd85efb7d42b7b4512ee66f7a67dad2d 253 Gene3D G3DSA:3.60.10.10 1 253 3.3E-72 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3497_11850 fd85efb7d42b7b4512ee66f7a67dad2d 253 SUPERFAMILY SSF56219 2 252 3.14E-77 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3497_11850 fd85efb7d42b7b4512ee66f7a67dad2d 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 244 1.0E-22 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase C3497_11850 fd85efb7d42b7b4512ee66f7a67dad2d 253 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 251 2.8E-72 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 C3497_02885 d415a22bcf782a341af9d1beb1cfe1ca 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 215 3.2E-44 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3497_02885 d415a22bcf782a341af9d1beb1cfe1ca 254 Gene3D G3DSA:3.40.1010.10 1 119 1.7E-40 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3497_02885 d415a22bcf782a341af9d1beb1cfe1ca 254 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_02885 d415a22bcf782a341af9d1beb1cfe1ca 254 SUPERFAMILY SSF53790 2 237 2.49E-65 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3497_02885 d415a22bcf782a341af9d1beb1cfe1ca 254 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 238 2.0E-86 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_02885 d415a22bcf782a341af9d1beb1cfe1ca 254 Gene3D G3DSA:3.30.950.10 120 245 3.5E-40 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3497_02885 d415a22bcf782a341af9d1beb1cfe1ca 254 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3497_10580 bb22bb0d14d7976bc2891fa760a8d858 162 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 19 160 1.7E-55 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 C3497_10580 bb22bb0d14d7976bc2891fa760a8d858 162 Gene3D G3DSA:3.40.50.620 29 161 2.4E-29 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_10580 bb22bb0d14d7976bc2891fa760a8d858 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 30 95 9.2E-13 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3497_10580 bb22bb0d14d7976bc2891fa760a8d858 162 Pfam PF01467 Cytidylyltransferase-like 32 123 8.8E-12 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3497_10580 bb22bb0d14d7976bc2891fa760a8d858 162 SUPERFAMILY SSF52374 28 159 1.32E-21 T 14-10-2018 C3497_01060 0f1b42d5dfc9a41f127b9d4261c39256 353 Gene3D G3DSA:1.10.10.10 295 351 7.7E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_01060 0f1b42d5dfc9a41f127b9d4261c39256 353 Pfam PF00753 Metallo-beta-lactamase superfamily 50 265 2.6E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_01060 0f1b42d5dfc9a41f127b9d4261c39256 353 Gene3D G3DSA:3.60.15.10 31 293 6.7E-61 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_01060 0f1b42d5dfc9a41f127b9d4261c39256 353 SMART SM00849 51 265 9.3E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_01060 0f1b42d5dfc9a41f127b9d4261c39256 353 SUPERFAMILY SSF56281 7 349 3.79E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_08785 128aef16d3cd6111b0e14139c8d12baf 665 Gene3D G3DSA:3.60.40.10 406 664 2.1E-49 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_08785 128aef16d3cd6111b0e14139c8d12baf 665 SMART SM00331 441 664 0.001 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_08785 128aef16d3cd6111b0e14139c8d12baf 665 Pfam PF00672 HAMP domain 339 386 7.3E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_08785 128aef16d3cd6111b0e14139c8d12baf 665 SUPERFAMILY SSF158472 339 388 9.94E-10 T 14-10-2018 C3497_08785 128aef16d3cd6111b0e14139c8d12baf 665 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 467 664 5.2E-22 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3497_08785 128aef16d3cd6111b0e14139c8d12baf 665 SMART SM00304 339 391 8.8E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3497_08785 128aef16d3cd6111b0e14139c8d12baf 665 Gene3D G3DSA:1.20.1480.50 306 398 2.2E-13 T 14-10-2018 C3497_05440 adb9f8969dab6aa6a944510e0876d858 171 Pfam PF02620 Uncharacterized ACR, COG1399 66 165 5.5E-19 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD C3497_09830 2bea73968dcd4e6db7f200441e360d66 87 SUPERFAMILY SSF46955 29 77 5.92E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3497_03570 2ada528ef98513a026ef79a4e64ff85c 242 Gene3D G3DSA:3.40.50.2020 128 242 4.1E-18 T 14-10-2018 C3497_03570 2ada528ef98513a026ef79a4e64ff85c 242 Pfam PF00156 Phosphoribosyl transferase domain 149 240 1.7E-8 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3497_03570 2ada528ef98513a026ef79a4e64ff85c 242 SUPERFAMILY SSF53271 71 240 2.1E-34 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3497_13420 89f3232b0a851edc3059af5a67cddd59 704 Gene3D G3DSA:2.170.130.10 7 121 2.7E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_13420 89f3232b0a851edc3059af5a67cddd59 704 SUPERFAMILY SSF56935 21 669 2.02E-80 T 14-10-2018 C3497_13420 89f3232b0a851edc3059af5a67cddd59 704 Gene3D G3DSA:2.40.170.20 134 690 2.1E-52 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3497_13420 89f3232b0a851edc3059af5a67cddd59 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 21 107 1.8E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_13420 89f3232b0a851edc3059af5a67cddd59 704 Pfam PF00593 TonB dependent receptor 241 677 4.0E-41 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_07485 55a97400b1c73f222c898b19bf054c31 144 SMART SM00116 80 127 5.3E-9 T 14-10-2018 IPR000644 CBS domain C3497_07485 55a97400b1c73f222c898b19bf054c31 144 SMART SM00116 14 62 1.2E-8 T 14-10-2018 IPR000644 CBS domain C3497_07485 55a97400b1c73f222c898b19bf054c31 144 Pfam PF00571 CBS domain 75 123 9.1E-12 T 14-10-2018 IPR000644 CBS domain C3497_07485 55a97400b1c73f222c898b19bf054c31 144 Pfam PF00571 CBS domain 12 61 6.2E-11 T 14-10-2018 IPR000644 CBS domain C3497_07485 55a97400b1c73f222c898b19bf054c31 144 SUPERFAMILY SSF54631 4 124 1.77E-31 T 14-10-2018 C3497_07485 55a97400b1c73f222c898b19bf054c31 144 Gene3D G3DSA:3.10.580.10 2 140 2.9E-39 T 14-10-2018 C3497_04820 a8bd6734327123f0a5cf1d355de3721d 459 PIRSF PIRSF000204 1 456 1.5E-158 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 C3497_04820 a8bd6734327123f0a5cf1d355de3721d 459 SUPERFAMILY SSF52467 281 455 4.33E-70 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C3497_04820 a8bd6734327123f0a5cf1d355de3721d 459 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 452 1.7E-170 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 C3497_04820 a8bd6734327123f0a5cf1d355de3721d 459 Gene3D G3DSA:3.40.50.1220 273 457 9.9E-80 T 14-10-2018 C3497_13790 69e5f7c62e8170e24bc249faa601bb31 374 Pfam PF13808 DDE_Tnp_1-associated 5 91 4.7E-32 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C3497_13790 69e5f7c62e8170e24bc249faa601bb31 374 Pfam PF01609 Transposase DDE domain 72 337 4.5E-20 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_12765 fcff1f85b40ab3962b9091b89687450b 182 PIRSF PIRSF006135 2 182 4.9E-55 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 C3497_12765 fcff1f85b40ab3962b9091b89687450b 182 Gene3D G3DSA:3.40.50.300 3 180 9.2E-57 T 14-10-2018 C3497_12765 fcff1f85b40ab3962b9091b89687450b 182 SUPERFAMILY SSF52540 4 180 9.3E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_12765 fcff1f85b40ab3962b9091b89687450b 182 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 178 1.7E-58 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 C3497_03445 f66c7bed989b1b62feb481d96e77bc0b 281 Pfam PF08668 HDOD domain 19 213 4.0E-37 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_03445 f66c7bed989b1b62feb481d96e77bc0b 281 Gene3D G3DSA:1.10.3210.10 15 277 1.3E-54 T 14-10-2018 C3497_03445 f66c7bed989b1b62feb481d96e77bc0b 281 SUPERFAMILY SSF109604 16 275 7.53E-51 T 14-10-2018 C3497_07665 7e98c066f88bdcf696f5468b81c4c348 217 Gene3D G3DSA:1.10.287.950 10 216 9.1E-58 T 14-10-2018 C3497_07665 7e98c066f88bdcf696f5468b81c4c348 217 SMART SM00283 3 215 1.2E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_07665 7e98c066f88bdcf696f5468b81c4c348 217 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 28 182 1.9E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_07665 7e98c066f88bdcf696f5468b81c4c348 217 SUPERFAMILY SSF58104 19 216 5.75E-61 T 14-10-2018 C3497_04245 316bd136b747abcf7e5a3f688e0f8401 153 Pfam PF13664 Domain of unknown function (DUF4149) 12 109 6.9E-19 T 14-10-2018 IPR025423 Domain of unknown function DUF4149 C3497_09630 d47e1075b19186ec8b21f8d91af0c700 272 PIRSF PIRSF006648 10 266 6.8E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3497_09630 d47e1075b19186ec8b21f8d91af0c700 272 Pfam PF01061 ABC-2 type transporter 21 233 4.5E-33 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 C3497_09630 d47e1075b19186ec8b21f8d91af0c700 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 153 177 1.2E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3497_09630 d47e1075b19186ec8b21f8d91af0c700 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 190 209 1.2E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3497_09630 d47e1075b19186ec8b21f8d91af0c700 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 41 62 1.2E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3497_09630 d47e1075b19186ec8b21f8d91af0c700 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 210 229 1.2E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3497_00220 7062ff1cf0eb622d567702d89fd936b2 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 29.249 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 C3497_00220 7062ff1cf0eb622d567702d89fd936b2 202 PIRSF PIRSF006102 1 202 4.6E-61 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_00220 7062ff1cf0eb622d567702d89fd936b2 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 8.2E-57 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_00220 7062ff1cf0eb622d567702d89fd936b2 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 201 2.4E-106 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 C3497_09450 81a1947c2751ad5e26e94030dcdb94f8 300 Gene3D G3DSA:2.70.70.10 160 297 1.2E-36 T 14-10-2018 IPR011055 Duplicated hybrid motif C3497_09450 81a1947c2751ad5e26e94030dcdb94f8 300 SUPERFAMILY SSF51261 58 297 8.89E-45 T 14-10-2018 IPR011055 Duplicated hybrid motif C3497_09450 81a1947c2751ad5e26e94030dcdb94f8 300 SMART SM00257 51 95 3.0E-14 T 14-10-2018 IPR018392 LysM domain C3497_09450 81a1947c2751ad5e26e94030dcdb94f8 300 Pfam PF01551 Peptidase family M23 200 293 5.1E-30 T 14-10-2018 IPR016047 Peptidase M23 C3497_09450 81a1947c2751ad5e26e94030dcdb94f8 300 Gene3D G3DSA:3.10.350.10 39 102 7.9E-16 T 14-10-2018 IPR036779 LysM domain superfamily C3497_09450 81a1947c2751ad5e26e94030dcdb94f8 300 Pfam PF01476 LysM domain 52 94 1.0E-12 T 14-10-2018 IPR018392 LysM domain C3497_08075 786ef9da580d07b225a00f5c52bb3cc3 51 Pfam PF11295 Protein of unknown function (DUF3096) 9 44 1.5E-15 T 14-10-2018 IPR021446 Protein of unknown function DUF3096 C3497_01385 bc19c86d6df16fd84c1941b943ef21aa 207 Gene3D G3DSA:3.90.950.10 3 205 2.4E-65 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3497_01385 bc19c86d6df16fd84c1941b943ef21aa 207 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 200 6.7E-43 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3497_01385 bc19c86d6df16fd84c1941b943ef21aa 207 PIRSF PIRSF006305 1 206 4.2E-47 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3497_01385 bc19c86d6df16fd84c1941b943ef21aa 207 Pfam PF02545 Maf-like protein 7 201 4.0E-52 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3497_01385 bc19c86d6df16fd84c1941b943ef21aa 207 SUPERFAMILY SSF52972 6 201 2.35E-56 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3497_01385 bc19c86d6df16fd84c1941b943ef21aa 207 Hamap MF_00528 Septum formation protein Maf [maf]. 7 206 31.894 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3497_14390 95ea04e321eb07d943274942358acaa4 260 Pfam PF01925 Sulfite exporter TauE/SafE 10 250 1.1E-39 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 C3497_05155 573e146f58ee6b141a5d98c3c41480b2 775 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 138 748 4.9E-105 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 C3497_05155 573e146f58ee6b141a5d98c3c41480b2 775 SUPERFAMILY SSF56281 521 768 2.94E-42 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_05155 573e146f58ee6b141a5d98c3c41480b2 775 Pfam PF00753 Metallo-beta-lactamase superfamily 527 616 8.4E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_05155 573e146f58ee6b141a5d98c3c41480b2 775 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 250 429 9.1E-27 T 14-10-2018 IPR004477 ComEC/Rec2-related protein C3497_05155 573e146f58ee6b141a5d98c3c41480b2 775 SMART SM00849 529 719 5.6E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3497_05155 573e146f58ee6b141a5d98c3c41480b2 775 Pfam PF03772 Competence protein 229 492 4.9E-59 T 14-10-2018 IPR004477 ComEC/Rec2-related protein C3497_05155 573e146f58ee6b141a5d98c3c41480b2 775 Gene3D G3DSA:3.60.15.10 522 759 1.7E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3497_05155 573e146f58ee6b141a5d98c3c41480b2 775 Pfam PF13567 Domain of unknown function (DUF4131) 27 185 5.4E-32 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 C3497_02060 537ec52c15540f0f5c959e57114aa98d 270 Pfam PF00899 ThiF family 22 254 3.6E-37 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 C3497_02060 537ec52c15540f0f5c959e57114aa98d 270 SUPERFAMILY SSF69572 11 254 1.7E-56 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 C3497_02060 537ec52c15540f0f5c959e57114aa98d 270 Gene3D G3DSA:3.40.50.720 8 265 3.8E-89 T 14-10-2018 C3497_08135 891cc3f9db3b1a704c97de0df4e4b581 192 PIRSF PIRSF016919 1 192 7.5E-58 T 14-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein C3497_08135 891cc3f9db3b1a704c97de0df4e4b581 192 Pfam PF04955 HupE / UreJ protein 12 188 4.1E-56 T 14-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein C3497_12395 aab45d1967e994a79d47839f27948543 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 192 1.3E-40 T 14-10-2018 C3497_12395 aab45d1967e994a79d47839f27948543 217 Gene3D G3DSA:3.40.50.150 1 209 5.9E-54 T 14-10-2018 C3497_12395 aab45d1967e994a79d47839f27948543 217 SUPERFAMILY SSF53335 1 177 6.88E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_08505 64f60ca3870072d699939e776d37c7c9 79 Pfam PF13711 Domain of unknown function (DUF4160) 11 74 6.0E-14 T 14-10-2018 IPR025427 Protein of unknown function DUF4160 C3497_08580 64f60ca3870072d699939e776d37c7c9 79 Pfam PF13711 Domain of unknown function (DUF4160) 11 74 6.0E-14 T 14-10-2018 IPR025427 Protein of unknown function DUF4160 C3497_08820 078262c2b36afde515b9194aa6fcaba9 679 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 45 671 3.8E-236 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily C3497_08820 078262c2b36afde515b9194aa6fcaba9 679 Gene3D G3DSA:1.20.1730.10 56 261 1.9E-34 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily C3497_08820 078262c2b36afde515b9194aa6fcaba9 679 Gene3D G3DSA:1.20.1730.10 336 665 4.8E-29 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily C3497_08820 078262c2b36afde515b9194aa6fcaba9 679 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 586 606 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site C3497_08820 078262c2b36afde515b9194aa6fcaba9 679 Pfam PF00474 Sodium:solute symporter family 69 238 2.0E-30 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 C3497_08820 078262c2b36afde515b9194aa6fcaba9 679 Pfam PF00474 Sodium:solute symporter family 489 604 2.4E-23 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 C3497_11715 ba3d9ea4f87b1896d858d7a7f9680bdb 94 Gene3D G3DSA:2.40.50.320 23 93 4.2E-23 T 14-10-2018 C3497_11715 ba3d9ea4f87b1896d858d7a7f9680bdb 94 Pfam PF11604 Copper binding periplasmic protein CusF 27 91 2.3E-25 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF C3497_12945 2f966ad9999a90722874ee1563b4723e 218 SUPERFAMILY SSF53639 5 214 1.08E-60 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily C3497_12945 2f966ad9999a90722874ee1563b4723e 218 Gene3D G3DSA:3.40.225.10 3 217 3.5E-65 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily C3497_12945 2f966ad9999a90722874ee1563b4723e 218 SMART SM01007 9 185 1.0E-58 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal C3497_12945 2f966ad9999a90722874ee1563b4723e 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 185 5.5E-47 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal C3497_08700 324a419c12ad2aca0b183cad2d41e682 215 Pfam PF00551 Formyl transferase 3 179 1.6E-53 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_08700 324a419c12ad2aca0b183cad2d41e682 215 SUPERFAMILY SSF53328 4 197 6.67E-63 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3497_08700 324a419c12ad2aca0b183cad2d41e682 215 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 189 1.2E-69 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 C3497_08700 324a419c12ad2aca0b183cad2d41e682 215 Gene3D G3DSA:3.40.50.170 1 204 3.6E-75 T 14-10-2018 C3497_08700 324a419c12ad2aca0b183cad2d41e682 215 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 185 31.248 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 C3497_02295 f0c495613b5032b9203d06dda35843d8 244 SUPERFAMILY SSF110997 134 204 5.1E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3497_02295 f0c495613b5032b9203d06dda35843d8 244 Pfam PF05036 Sporulation related domain 133 201 2.7E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 C3497_02670 45bd9162bc41a5e34b6569bc4bc2d6e1 221 PRINTS PR00173 Glutamate-aspartate symporter signature 32 51 3.3E-5 T 14-10-2018 C3497_02670 45bd9162bc41a5e34b6569bc4bc2d6e1 221 PRINTS PR00173 Glutamate-aspartate symporter signature 59 78 3.3E-5 T 14-10-2018 C3497_02670 45bd9162bc41a5e34b6569bc4bc2d6e1 221 PRINTS PR00173 Glutamate-aspartate symporter signature 157 176 3.3E-5 T 14-10-2018 C3497_02670 45bd9162bc41a5e34b6569bc4bc2d6e1 221 SUPERFAMILY SSF161098 13 208 7.98E-40 T 14-10-2018 IPR035906 MetI-like superfamily C3497_02670 45bd9162bc41a5e34b6569bc4bc2d6e1 221 Gene3D G3DSA:1.10.3720.10 9 220 3.2E-43 T 14-10-2018 IPR035906 MetI-like superfamily C3497_02670 45bd9162bc41a5e34b6569bc4bc2d6e1 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 210 2.9E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_00535 712032d28d82534ccf7402d0b7691eea 243 SUPERFAMILY SSF52540 35 232 4.89E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_00535 712032d28d82534ccf7402d0b7691eea 243 SMART SM00382 39 235 4.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_00535 712032d28d82534ccf7402d0b7691eea 243 Pfam PF00005 ABC transporter 35 187 9.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_00535 712032d28d82534ccf7402d0b7691eea 243 Gene3D G3DSA:3.40.50.300 13 238 3.2E-54 T 14-10-2018 C3497_12700 a63133fff10265e609e68f317fd1adb7 378 Pfam PF01734 Patatin-like phospholipase 10 222 1.4E-22 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 C3497_12700 a63133fff10265e609e68f317fd1adb7 378 Gene3D G3DSA:3.40.1090.10 124 249 6.7E-6 T 14-10-2018 C3497_12700 a63133fff10265e609e68f317fd1adb7 378 Gene3D G3DSA:3.40.1090.10 2 104 6.2E-17 T 14-10-2018 C3497_12700 a63133fff10265e609e68f317fd1adb7 378 SUPERFAMILY SSF52151 8 247 7.06E-45 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C3497_05150 af158fa69889f07b4e4744c47af50f0a 183 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 21 172 6.2E-40 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 C3497_08510 12b18e26bd1a1c29231c208d4037ca25 99 Pfam PF10387 Protein of unknown function (DUF2442) 8 75 4.1E-11 T 14-10-2018 IPR018841 Protein of unknown function DUF2442 C3497_08585 12b18e26bd1a1c29231c208d4037ca25 99 Pfam PF10387 Protein of unknown function (DUF2442) 8 75 4.1E-11 T 14-10-2018 IPR018841 Protein of unknown function DUF2442 C3497_02275 eeb9c95a79d2ae6fb21bb359f9ff4e8f 312 SUPERFAMILY SSF51391 115 310 3.14E-44 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3497_02275 eeb9c95a79d2ae6fb21bb359f9ff4e8f 312 Gene3D G3DSA:3.20.20.70 130 311 1.2E-42 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_02275 eeb9c95a79d2ae6fb21bb359f9ff4e8f 312 Pfam PF00293 NUDIX domain 7 120 3.8E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3497_02275 eeb9c95a79d2ae6fb21bb359f9ff4e8f 312 SUPERFAMILY SSF55811 3 127 4.87E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3497_02275 eeb9c95a79d2ae6fb21bb359f9ff4e8f 312 PRINTS PR00502 NUDIX hydrolase family signature 48 63 4.5E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3497_02275 eeb9c95a79d2ae6fb21bb359f9ff4e8f 312 PRINTS PR00502 NUDIX hydrolase family signature 34 48 4.5E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3497_02275 eeb9c95a79d2ae6fb21bb359f9ff4e8f 312 Gene3D G3DSA:3.90.79.10 1 129 4.1E-35 T 14-10-2018 C3497_02275 eeb9c95a79d2ae6fb21bb359f9ff4e8f 312 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3497_02275 eeb9c95a79d2ae6fb21bb359f9ff4e8f 312 Pfam PF02581 Thiamine monophosphate synthase 135 308 9.6E-39 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3497_14450 8f1bdb7450928843795c9aedc00a0491 289 PRINTS PR00721 Stomatin signature 113 130 1.6E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3497_14450 8f1bdb7450928843795c9aedc00a0491 289 PRINTS PR00721 Stomatin signature 176 197 1.6E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3497_14450 8f1bdb7450928843795c9aedc00a0491 289 PRINTS PR00721 Stomatin signature 133 156 1.6E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3497_14450 8f1bdb7450928843795c9aedc00a0491 289 PRINTS PR00721 Stomatin signature 30 52 1.6E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3497_14450 8f1bdb7450928843795c9aedc00a0491 289 PRINTS PR00721 Stomatin signature 78 99 1.6E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3497_14450 8f1bdb7450928843795c9aedc00a0491 289 PRINTS PR00721 Stomatin signature 157 175 1.6E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3497_14450 8f1bdb7450928843795c9aedc00a0491 289 Gene3D G3DSA:3.30.479.30 51 183 1.1E-37 T 14-10-2018 C3497_14450 8f1bdb7450928843795c9aedc00a0491 289 SUPERFAMILY SSF117892 54 187 7.45E-38 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily C3497_14450 8f1bdb7450928843795c9aedc00a0491 289 Pfam PF01145 SPFH domain / Band 7 family 28 198 1.9E-31 T 14-10-2018 IPR001107 Band 7 domain C3497_14450 8f1bdb7450928843795c9aedc00a0491 289 SMART SM00244 23 181 3.7E-52 T 14-10-2018 IPR001107 Band 7 domain C3497_09330 16542acf88299ae2766e0f3182662f01 224 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 222 25.193 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 C3497_09330 16542acf88299ae2766e0f3182662f01 224 Pfam PF02107 Flagellar L-ring protein 47 223 1.4E-59 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 C3497_09330 16542acf88299ae2766e0f3182662f01 224 PRINTS PR01008 Flagellar L-ring protein signature 138 153 8.4E-25 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 C3497_09330 16542acf88299ae2766e0f3182662f01 224 PRINTS PR01008 Flagellar L-ring protein signature 164 180 8.4E-25 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 C3497_09330 16542acf88299ae2766e0f3182662f01 224 PRINTS PR01008 Flagellar L-ring protein signature 185 199 8.4E-25 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 C3497_09330 16542acf88299ae2766e0f3182662f01 224 PRINTS PR01008 Flagellar L-ring protein signature 201 215 8.4E-25 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 C3497_09330 16542acf88299ae2766e0f3182662f01 224 PRINTS PR01008 Flagellar L-ring protein signature 67 79 8.4E-25 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 C3497_14225 56fdcad42d3ce54ef982ed2c2e12f160 357 Pfam PF02424 ApbE family 45 318 7.8E-71 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 C3497_14225 56fdcad42d3ce54ef982ed2c2e12f160 357 SUPERFAMILY SSF143631 37 344 1.23E-74 T 14-10-2018 IPR003374 ApbE-like superfamily C3497_14225 56fdcad42d3ce54ef982ed2c2e12f160 357 Gene3D G3DSA:3.10.520.20 30 351 3.7E-84 T 14-10-2018 C3497_14225 56fdcad42d3ce54ef982ed2c2e12f160 357 PIRSF PIRSF006268 10 347 2.6E-85 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 C3497_07885 48c30dc02a12216d317ad87e6b0b22e9 324 Gene3D G3DSA:3.40.190.10 152 306 8.2E-11 T 14-10-2018 C3497_07885 48c30dc02a12216d317ad87e6b0b22e9 324 SUPERFAMILY SSF53850 24 256 7.25E-26 T 14-10-2018 C3497_07885 48c30dc02a12216d317ad87e6b0b22e9 324 Pfam PF09084 NMT1/THI5 like 53 244 3.0E-13 T 14-10-2018 IPR015168 SsuA/THI5-like C3497_07885 48c30dc02a12216d317ad87e6b0b22e9 324 Gene3D G3DSA:3.40.190.10 24 151 3.9E-9 T 14-10-2018 C3497_10165 74d51f9770893185efcc1f2b1d43cbec 1302 SUPERFAMILY SSF49899 36 267 2.14E-23 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily C3497_10165 74d51f9770893185efcc1f2b1d43cbec 1302 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 104 267 7.1E-18 T 14-10-2018 C3497_10165 74d51f9770893185efcc1f2b1d43cbec 1302 SMART SM00282 122 264 0.0011 T 14-10-2018 IPR001791 Laminin G domain C3497_10165 74d51f9770893185efcc1f2b1d43cbec 1302 Gene3D G3DSA:2.60.120.200 34 270 5.4E-19 T 14-10-2018 C3497_00505 545332ba14265c7595cf603136815573 322 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 51 259 1.2E-64 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN C3497_00505 545332ba14265c7595cf603136815573 322 Gene3D G3DSA:3.40.50.11550 50 265 7.9E-26 T 14-10-2018 C3497_00505 545332ba14265c7595cf603136815573 322 SUPERFAMILY SSF159501 31 276 2.25E-64 T 14-10-2018 C3497_00505 545332ba14265c7595cf603136815573 322 Gene3D G3DSA:1.10.8.760 155 222 7.9E-26 T 14-10-2018 C3497_12175 df6adb981267f160d6767cc8d3ced9b0 147 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 147 46.896 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 C3497_12175 df6adb981267f160d6767cc8d3ced9b0 147 Pfam PF02381 MraZ protein, putative antitoxin-like 79 136 2.1E-13 T 14-10-2018 IPR020603 MraZ domain C3497_12175 df6adb981267f160d6767cc8d3ced9b0 147 Pfam PF02381 MraZ protein, putative antitoxin-like 1 73 8.5E-15 T 14-10-2018 IPR020603 MraZ domain C3497_12175 df6adb981267f160d6767cc8d3ced9b0 147 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 135 3.9E-38 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 C3497_12175 df6adb981267f160d6767cc8d3ced9b0 147 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 128 2.0E-56 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 C3497_12175 df6adb981267f160d6767cc8d3ced9b0 147 Gene3D G3DSA:2.40.330.20 1 138 3.6E-38 T 14-10-2018 IPR038619 MraZ superfamily C3497_12175 df6adb981267f160d6767cc8d3ced9b0 147 SUPERFAMILY SSF89447 1 133 3.14E-40 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C3497_07160 47e6262da2db0df4a8da0cc15130f478 152 Gene3D G3DSA:3.30.420.10 2 148 2.8E-57 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_07160 47e6262da2db0df4a8da0cc15130f478 152 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 34.59 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 C3497_07160 47e6262da2db0df4a8da0cc15130f478 152 SUPERFAMILY SSF53098 1 141 4.05E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_07160 47e6262da2db0df4a8da0cc15130f478 152 Pfam PF00075 RNase H 3 140 7.8E-49 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 C3497_14125 244fa4302698b59706c41ac0d1bf111a 137 SUPERFAMILY SSF88723 5 134 2.8E-16 T 14-10-2018 IPR029060 PIN-like domain superfamily C3497_14125 244fa4302698b59706c41ac0d1bf111a 137 Pfam PF01850 PIN domain 5 130 2.4E-13 T 14-10-2018 IPR002716 PIN domain C3497_14125 244fa4302698b59706c41ac0d1bf111a 137 Gene3D G3DSA:3.40.50.1010 5 135 6.0E-10 T 14-10-2018 C3497_14125 244fa4302698b59706c41ac0d1bf111a 137 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 135 10.434 T 14-10-2018 IPR022907 VapC family GO:0004540 C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 SUPERFAMILY SSF52096 27 210 6.78E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 Gene3D G3DSA:3.90.226.10 10 211 3.2E-85 T 14-10-2018 C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 18 207 2.6E-106 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 Pfam PF00574 Clp protease 29 208 5.7E-89 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 PRINTS PR00127 Clp protease catalytic subunit P signature 127 146 6.6E-53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 6.6E-53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 PRINTS PR00127 Clp protease catalytic subunit P signature 35 50 6.6E-53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 PRINTS PR00127 Clp protease catalytic subunit P signature 75 95 6.6E-53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 PRINTS PR00127 Clp protease catalytic subunit P signature 106 123 6.6E-53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 19 209 44.786 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 106 117 - T 14-10-2018 IPR018215 ClpP, Ser active site C3497_05015 84379cba71321a92f2a89f7ea5bd2a3d 212 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 128 141 - T 14-10-2018 IPR033135 ClpP, histidine active site C3497_03915 233ca68c445e8af2c082be4b684cd253 333 Gene3D G3DSA:3.10.290.10 28 90 3.3E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3497_03915 233ca68c445e8af2c082be4b684cd253 333 SUPERFAMILY SSF55174 36 87 2.19E-8 T 14-10-2018 C3497_03915 233ca68c445e8af2c082be4b684cd253 333 Pfam PF00849 RNA pseudouridylate synthase 114 263 3.0E-33 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_03915 233ca68c445e8af2c082be4b684cd253 333 SMART SM00363 37 98 6.7E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_03915 233ca68c445e8af2c082be4b684cd253 333 SUPERFAMILY SSF55120 100 326 1.97E-78 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_03915 233ca68c445e8af2c082be4b684cd253 333 Pfam PF01479 S4 domain 38 82 4.2E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_03915 233ca68c445e8af2c082be4b684cd253 333 Gene3D G3DSA:3.30.2350.10 105 329 5.9E-75 T 14-10-2018 C3497_03915 233ca68c445e8af2c082be4b684cd253 333 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 36 326 3.6E-94 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_03915 233ca68c445e8af2c082be4b684cd253 333 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 156 170 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3497_03550 fad3f95b6bf2e4cc00f6004932f544e7 158 Pfam PF00583 Acetyltransferase (GNAT) family 8 133 2.4E-13 T 14-10-2018 IPR000182 GNAT domain C3497_03550 fad3f95b6bf2e4cc00f6004932f544e7 158 SUPERFAMILY SSF55729 2 153 2.13E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3497_03550 fad3f95b6bf2e4cc00f6004932f544e7 158 Gene3D G3DSA:3.40.630.30 1 148 1.2E-23 T 14-10-2018 C3497_04665 415a17a3d0713c780bc08d4149e994fd 301 ProSitePatterns PS00018 EF-hand calcium-binding domain. 211 223 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site C3497_11340 5d0c606e4640d50ccfcaf3da9c0f9698 184 Pfam PF11136 Protein of unknown function (DUF2889) 14 137 3.8E-42 T 14-10-2018 IPR021312 Protein of unknown function DUF2889 C3497_13300 dc81d1f8956a2ccf7305e8bb7b527475 281 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 276 1.1E-40 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13300 dc81d1f8956a2ccf7305e8bb7b527475 281 Pfam PF00119 ATP synthase A chain 40 274 4.6E-55 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13300 dc81d1f8956a2ccf7305e8bb7b527475 281 Gene3D G3DSA:1.20.120.220 91 281 3.0E-52 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13300 dc81d1f8956a2ccf7305e8bb7b527475 281 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 281 14.001 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13300 dc81d1f8956a2ccf7305e8bb7b527475 281 ProSitePatterns PS00449 ATP synthase a subunit signature. 210 219 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_13300 dc81d1f8956a2ccf7305e8bb7b527475 281 SUPERFAMILY SSF81336 93 274 8.89E-40 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3497_10770 87047005532289e321977561b2079d74 313 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 11 256 3.2E-52 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 C3497_10770 87047005532289e321977561b2079d74 313 SUPERFAMILY SSF53850 48 258 5.65E-38 T 14-10-2018 C3497_10770 87047005532289e321977561b2079d74 313 Gene3D G3DSA:3.40.190.10 50 259 7.7E-52 T 14-10-2018 C3497_10770 87047005532289e321977561b2079d74 313 Gene3D G3DSA:3.40.190.10 124 232 7.7E-52 T 14-10-2018 C3497_10770 87047005532289e321977561b2079d74 313 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 51 259 5.5E-55 T 14-10-2018 C3497_12900 7eb7ded9beb8bc2cf529d7668e3640d3 169 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 1.9E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_12900 7eb7ded9beb8bc2cf529d7668e3640d3 169 Gene3D G3DSA:2.160.10.10 11 169 2.4E-30 T 14-10-2018 C3497_12900 7eb7ded9beb8bc2cf529d7668e3640d3 169 SUPERFAMILY SSF51161 6 167 2.08E-31 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3497_02690 de7aff773438e795082013742765462a 438 Pfam PF02653 Branched-chain amino acid transport system / permease component 123 409 8.0E-53 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_02690 de7aff773438e795082013742765462a 438 Pfam PF11862 Domain of unknown function (DUF3382) 16 111 2.1E-14 T 14-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal C3497_06960 efd43ebcf8af9f0779d07843c572128b 323 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 1 312 49.169 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 C3497_06960 efd43ebcf8af9f0779d07843c572128b 323 SUPERFAMILY SSF51395 1 293 2.38E-63 T 14-10-2018 C3497_06960 efd43ebcf8af9f0779d07843c572128b 323 Gene3D G3DSA:3.20.20.70 1 234 7.4E-69 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_06960 efd43ebcf8af9f0779d07843c572128b 323 PIRSF PIRSF006621 1 314 7.0E-68 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3497_06960 efd43ebcf8af9f0779d07843c572128b 323 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 85 103 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3497_06960 efd43ebcf8af9f0779d07843c572128b 323 Pfam PF01207 Dihydrouridine synthase (Dus) 1 276 3.1E-60 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3497_06960 efd43ebcf8af9f0779d07843c572128b 323 Gene3D G3DSA:1.20.225.30 246 312 9.4E-10 T 14-10-2018 C3497_10325 25d3ca33c446524dd20b6a9ff64ebf0c 138 Pfam PF00011 Hsp20/alpha crystallin family 38 137 2.2E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain C3497_10325 25d3ca33c446524dd20b6a9ff64ebf0c 138 Gene3D G3DSA:2.60.40.790 2 138 7.7E-35 T 14-10-2018 IPR008978 HSP20-like chaperone C3497_10325 25d3ca33c446524dd20b6a9ff64ebf0c 138 SUPERFAMILY SSF49764 9 138 4.93E-37 T 14-10-2018 IPR008978 HSP20-like chaperone C3497_12620 cd707f73f135de6f234935c1365ca587 129 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 10 120 3.0E-22 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 C3497_12620 cd707f73f135de6f234935c1365ca587 129 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 8 125 18.555 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 C3497_12620 cd707f73f135de6f234935c1365ca587 129 TIGRFAM TIGR00494 crcB: protein CrcB 9 123 2.9E-25 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 C3497_00675 67c4c35169732b4a7f3c19f8ca488fc7 302 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 83 156 3.0E-9 T 14-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal C3497_00675 67c4c35169732b4a7f3c19f8ca488fc7 302 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 174 286 3.0E-29 T 14-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal C3497_00675 67c4c35169732b4a7f3c19f8ca488fc7 302 Gene3D G3DSA:3.30.1370.140 173 270 4.0E-30 T 14-10-2018 IPR038527 HupH, C-terminal domain superfamily C3497_00675 67c4c35169732b4a7f3c19f8ca488fc7 302 Gene3D G3DSA:3.30.1370.140 55 152 3.0E-19 T 14-10-2018 IPR038527 HupH, C-terminal domain superfamily C3497_00675 67c4c35169732b4a7f3c19f8ca488fc7 302 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 90 155 2.2E-11 T 14-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal C3497_00675 67c4c35169732b4a7f3c19f8ca488fc7 302 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 174 290 9.9E-46 T 14-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal C3497_09540 71d9cab8228ba931c4a536856a0c9f46 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 386 34.735 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 C3497_09540 71d9cab8228ba931c4a536856a0c9f46 391 SMART SM00028 180 213 0.084 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_09540 71d9cab8228ba931c4a536856a0c9f46 391 SMART SM00028 214 247 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_09540 71d9cab8228ba931c4a536856a0c9f46 391 SMART SM00028 70 103 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_09540 71d9cab8228ba931c4a536856a0c9f46 391 SMART SM00028 37 69 53.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3497_09540 71d9cab8228ba931c4a536856a0c9f46 391 Gene3D G3DSA:1.25.40.10 39 175 1.2E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_09540 71d9cab8228ba931c4a536856a0c9f46 391 SUPERFAMILY SSF48452 107 281 8.34E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_09540 71d9cab8228ba931c4a536856a0c9f46 391 Gene3D G3DSA:1.25.40.10 176 304 3.0E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_09540 71d9cab8228ba931c4a536856a0c9f46 391 Pfam PF13432 Tetratricopeptide repeat 185 237 9.1E-8 T 14-10-2018 C3497_09540 71d9cab8228ba931c4a536856a0c9f46 391 SUPERFAMILY SSF48452 40 134 5.26E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_12910 d8e9ef7b3f00084fe6e4ca6bcdfd90a1 377 Pfam PF13692 Glycosyl transferases group 1 203 343 6.1E-14 T 14-10-2018 C3497_12910 d8e9ef7b3f00084fe6e4ca6bcdfd90a1 377 Pfam PF13579 Glycosyl transferase 4-like domain 21 121 6.0E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3497_12910 d8e9ef7b3f00084fe6e4ca6bcdfd90a1 377 Gene3D G3DSA:3.40.50.2000 197 360 4.2E-20 T 14-10-2018 C3497_12910 d8e9ef7b3f00084fe6e4ca6bcdfd90a1 377 Gene3D G3DSA:3.40.50.2000 1 190 2.7E-16 T 14-10-2018 C3497_12910 d8e9ef7b3f00084fe6e4ca6bcdfd90a1 377 SUPERFAMILY SSF53756 1 370 5.89E-35 T 14-10-2018 C3497_08255 f3f0a1b5559e11a140894e298e858d50 268 Gene3D G3DSA:3.100.10.20 17 97 8.4E-8 T 14-10-2018 C3497_08255 f3f0a1b5559e11a140894e298e858d50 268 Pfam PF01867 CRISPR associated protein Cas1 28 98 1.6E-7 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C3497_10575 94285ec6aad5f209a7847cb44b46d986 535 Pfam PF02690 Na+/Pi-cotransporter 153 237 6.0E-9 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 C3497_10575 94285ec6aad5f209a7847cb44b46d986 535 Pfam PF02690 Na+/Pi-cotransporter 1 136 4.6E-40 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 C3497_10110 47bf1ea9816ac2197d0e4a5bc8e1229a 302 Gene3D G3DSA:3.40.50.300 27 186 1.8E-11 T 14-10-2018 C3497_10110 47bf1ea9816ac2197d0e4a5bc8e1229a 302 Pfam PF13401 AAA domain 42 171 1.7E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10110 47bf1ea9816ac2197d0e4a5bc8e1229a 302 SUPERFAMILY SSF52540 5 265 3.3E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_06330 b08b983f949e653cfbc31308481db0d5 491 Pfam PF00916 Sulfate permease family 162 353 2.3E-30 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 C3497_06330 b08b983f949e653cfbc31308481db0d5 491 Pfam PF00916 Sulfate permease family 13 142 1.2E-26 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 C3497_06330 b08b983f949e653cfbc31308481db0d5 491 SUPERFAMILY SSF52091 397 480 1.16E-11 T 14-10-2018 IPR036513 STAS domain superfamily C3497_06330 b08b983f949e653cfbc31308481db0d5 491 Pfam PF01740 STAS domain 397 481 2.1E-9 T 14-10-2018 IPR002645 STAS domain C3497_06330 b08b983f949e653cfbc31308481db0d5 491 Gene3D G3DSA:3.30.750.24 383 480 6.7E-30 T 14-10-2018 IPR036513 STAS domain superfamily C3497_12050 3db51854d0cba202e83153ed6cca2b58 199 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 198 30.582 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 C3497_12050 3db51854d0cba202e83153ed6cca2b58 199 SUPERFAMILY SSF52218 1 197 5.32E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3497_12050 3db51854d0cba202e83153ed6cca2b58 199 Gene3D G3DSA:3.40.50.360 2 198 3.8E-59 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3497_12050 3db51854d0cba202e83153ed6cca2b58 199 Pfam PF02525 Flavodoxin-like fold 1 195 4.8E-46 T 14-10-2018 IPR003680 Flavodoxin-like fold C3497_05615 f73e3286707f473ecee2e4cc4db47c7b 314 Gene3D G3DSA:3.40.50.1820 1 313 1.0E-94 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_05615 f73e3286707f473ecee2e4cc4db47c7b 314 Pfam PF07859 alpha/beta hydrolase fold 83 288 9.5E-71 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 C3497_05615 f73e3286707f473ecee2e4cc4db47c7b 314 SUPERFAMILY SSF53474 42 312 6.14E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_10925 c079cc9d7ea242e2f035e449546e2f8c 203 Pfam PF11679 Protein of unknown function (DUF3275) 2 199 1.6E-90 T 14-10-2018 IPR021693 Protein of unknown function DUF3275 C3497_09650 6cb50116772bed5a6a5be84939aaa62e 367 Gene3D G3DSA:3.40.50.2000 193 340 2.0E-25 T 14-10-2018 C3497_09650 6cb50116772bed5a6a5be84939aaa62e 367 SUPERFAMILY SSF53756 70 357 7.69E-15 T 14-10-2018 C3497_04205 ebcfaef8cd935dabcc31609dbd121f12 552 Gene3D G3DSA:3.40.50.300 1 249 1.5E-41 T 14-10-2018 C3497_04205 ebcfaef8cd935dabcc31609dbd121f12 552 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 550 1.0E-146 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 C3497_04205 ebcfaef8cd935dabcc31609dbd121f12 552 Gene3D G3DSA:3.40.50.300 250 550 4.5E-50 T 14-10-2018 C3497_04205 ebcfaef8cd935dabcc31609dbd121f12 552 SUPERFAMILY SSF52540 1 218 4.83E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04205 ebcfaef8cd935dabcc31609dbd121f12 552 PIRSF PIRSF003128 1 552 2.4E-146 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 C3497_04205 ebcfaef8cd935dabcc31609dbd121f12 552 SUPERFAMILY SSF52540 3 503 7.16E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04205 ebcfaef8cd935dabcc31609dbd121f12 552 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 508 3.6E-14 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal C3497_09760 851496633f1e10a020d2bf3b2ef57fd2 324 Pfam PF13280 WYL domain 159 312 2.5E-22 T 14-10-2018 IPR026881 WYL domain C3497_04770 e0210ba487a8ea4e5101bf4c1dd51e8a 87 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_04770 e0210ba487a8ea4e5101bf4c1dd51e8a 87 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 3.0E-17 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_04770 e0210ba487a8ea4e5101bf4c1dd51e8a 87 SUPERFAMILY SSF110324 2 82 2.51E-35 T 14-10-2018 C3497_04770 e0210ba487a8ea4e5101bf4c1dd51e8a 87 Gene3D G3DSA:2.40.50.100 20 86 2.6E-31 T 14-10-2018 C3497_04770 e0210ba487a8ea4e5101bf4c1dd51e8a 87 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_04770 e0210ba487a8ea4e5101bf4c1dd51e8a 87 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_04770 e0210ba487a8ea4e5101bf4c1dd51e8a 87 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_04770 e0210ba487a8ea4e5101bf4c1dd51e8a 87 Pfam PF01016 Ribosomal L27 protein 2 81 8.0E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_04770 e0210ba487a8ea4e5101bf4c1dd51e8a 87 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.338 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_04770 e0210ba487a8ea4e5101bf4c1dd51e8a 87 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 9.3E-42 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_05595 172d8b3f037c8fad1f494881d4c6fbe9 400 SUPERFAMILY SSF53649 55 397 1.42E-38 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 C3497_05595 172d8b3f037c8fad1f494881d4c6fbe9 400 Gene3D G3DSA:3.40.720.10 49 398 1.1E-29 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 C3497_05595 172d8b3f037c8fad1f494881d4c6fbe9 400 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 87 119 2.4E-4 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 C3497_05595 172d8b3f037c8fad1f494881d4c6fbe9 400 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 214 383 2.1E-9 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.4E-43 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 PIRSF PIRSF002133 1 124 7.4E-55 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 Gene3D G3DSA:2.40.50.140 1 125 4.3E-64 T 14-10-2018 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 SUPERFAMILY SSF50249 2 124 2.4E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.2E-70 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_01835 7df943c67435c15de123bb2c1a6a831d 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.609 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_03825 d6fddd794cc247831b886228a8e1b076 149 PRINTS PR01483 Fatty acid synthase signature 33 55 3.9E-6 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 C3497_03825 d6fddd794cc247831b886228a8e1b076 149 PRINTS PR01483 Fatty acid synthase signature 55 76 3.9E-6 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 C3497_03825 d6fddd794cc247831b886228a8e1b076 149 SUPERFAMILY SSF54637 12 148 8.88E-43 T 14-10-2018 IPR029069 HotDog domain superfamily C3497_03825 d6fddd794cc247831b886228a8e1b076 149 Gene3D G3DSA:3.10.129.10 10 147 1.9E-45 T 14-10-2018 C3497_03825 d6fddd794cc247831b886228a8e1b076 149 Pfam PF01575 MaoC like domain 25 119 7.5E-27 T 14-10-2018 IPR002539 MaoC-like dehydratase domain C3497_06620 34949848817555eaacc8863109d7821d 452 Pfam PF13742 OB-fold nucleic acid binding domain 17 108 4.5E-30 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 C3497_06620 34949848817555eaacc8863109d7821d 452 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 13 448 27.523 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 C3497_06620 34949848817555eaacc8863109d7821d 452 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 18 367 6.9E-124 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 C3497_06620 34949848817555eaacc8863109d7821d 452 Pfam PF02601 Exonuclease VII, large subunit 132 445 1.3E-90 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 C3497_13040 c58928e5354d93ddb3172ddb3c2aafb4 194 Gene3D G3DSA:1.10.8.640 49 131 3.0E-29 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily C3497_13040 c58928e5354d93ddb3172ddb3c2aafb4 194 Pfam PF03918 Cytochrome C biogenesis protein 46 180 7.9E-46 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family C3497_01535 e1d60d5363b785f16377821455bcf1e3 323 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 15 313 1.3E-56 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 C3497_01535 e1d60d5363b785f16377821455bcf1e3 323 Pfam PF03186 CobD/Cbib protein 15 295 3.1E-93 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 C3497_01535 e1d60d5363b785f16377821455bcf1e3 323 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 101.19 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 C3497_03155 05fd46843c48997ea885ef40b5440682 183 Gene3D G3DSA:1.20.1200.10 17 183 4.1E-62 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 C3497_03155 05fd46843c48997ea885ef40b5440682 183 Pfam PF01923 Cobalamin adenosyltransferase 8 165 8.0E-57 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 C3497_03155 05fd46843c48997ea885ef40b5440682 183 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 179 5.0E-51 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 C3497_03155 05fd46843c48997ea885ef40b5440682 183 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 178 8.2E-61 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 C3497_03155 05fd46843c48997ea885ef40b5440682 183 SUPERFAMILY SSF89028 7 178 1.53E-61 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 C3497_11455 6b70de2f3ae3c3ebcd6f73fd8dce3d42 94 SUPERFAMILY SSF52091 8 91 4.32E-15 T 14-10-2018 IPR036513 STAS domain superfamily C3497_11455 6b70de2f3ae3c3ebcd6f73fd8dce3d42 94 Pfam PF13466 STAS domain 9 85 1.5E-20 T 14-10-2018 IPR002645 STAS domain C3497_11455 6b70de2f3ae3c3ebcd6f73fd8dce3d42 94 Gene3D G3DSA:3.30.750.24 3 94 1.3E-14 T 14-10-2018 IPR036513 STAS domain superfamily C3497_11235 3c008dc523290587d481152f80755e70 306 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 10 279 2.3E-42 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system C3497_05330 0d119438c4343116351d932a5822721d 208 Gene3D G3DSA:3.30.70.2050 151 208 1.8E-12 T 14-10-2018 C3497_05330 0d119438c4343116351d932a5822721d 208 Pfam PF05573 NosL 72 196 4.2E-28 T 14-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL C3497_05330 0d119438c4343116351d932a5822721d 208 SUPERFAMILY SSF160387 92 202 1.2E-29 T 14-10-2018 C3497_12550 fd28db997e7d084c22940de89cb3b40d 323 SUPERFAMILY SSF53098 134 304 1.39E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3497_12550 fd28db997e7d084c22940de89cb3b40d 323 SUPERFAMILY SSF46689 22 110 1.79E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_12550 fd28db997e7d084c22940de89cb3b40d 323 Pfam PF00665 Integrase core domain 137 256 3.8E-24 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3497_12550 fd28db997e7d084c22940de89cb3b40d 323 Gene3D G3DSA:3.30.420.10 131 310 1.2E-27 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3497_05050 bc25a2c319fb9bfab12c9637157162ed 206 Gene3D G3DSA:3.90.79.10 29 198 7.9E-53 T 14-10-2018 C3497_05050 bc25a2c319fb9bfab12c9637157162ed 206 Pfam PF00293 NUDIX domain 41 120 3.5E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3497_05050 bc25a2c319fb9bfab12c9637157162ed 206 SUPERFAMILY SSF55811 36 193 7.18E-39 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3497_01740 447c1930130e10c04268f26e1867f655 304 Gene3D G3DSA:3.40.50.2300 71 270 3.9E-26 T 14-10-2018 C3497_01740 447c1930130e10c04268f26e1867f655 304 Gene3D G3DSA:3.40.50.2300 124 287 3.9E-26 T 14-10-2018 C3497_01740 447c1930130e10c04268f26e1867f655 304 Pfam PF04392 ABC transporter substrate binding protein 71 288 1.9E-17 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein C3497_05750 e02170bde09cd561a5ad161fa229c817 86 Gene3D G3DSA:3.30.1070.10 1 83 2.4E-25 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 C3497_05750 e02170bde09cd561a5ad161fa229c817 86 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 5.3E-23 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 C3497_05750 e02170bde09cd561a5ad161fa229c817 86 SUPERFAMILY SSF55229 36 84 3.4E-14 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 C3497_05750 e02170bde09cd561a5ad161fa229c817 86 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.7E-26 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 C3497_05750 e02170bde09cd561a5ad161fa229c817 86 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 17.777 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 C3497_11525 87ad44cbdb71461a05c74ad69119fbcd 699 SUPERFAMILY SSF109604 352 500 8.37E-18 T 14-10-2018 C3497_11525 87ad44cbdb71461a05c74ad69119fbcd 699 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 7 697 9.5E-217 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11525 87ad44cbdb71461a05c74ad69119fbcd 699 Pfam PF05746 DALR anticodon binding domain 592 685 2.9E-7 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 C3497_11525 87ad44cbdb71461a05c74ad69119fbcd 699 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 255 270 9.3E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11525 87ad44cbdb71461a05c74ad69119fbcd 699 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 327 343 9.3E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11525 87ad44cbdb71461a05c74ad69119fbcd 699 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 403 422 9.3E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11525 87ad44cbdb71461a05c74ad69119fbcd 699 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 11 24 9.3E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11525 87ad44cbdb71461a05c74ad69119fbcd 699 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 56 68 9.3E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11525 87ad44cbdb71461a05c74ad69119fbcd 699 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 10 561 4.6E-205 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_11525 87ad44cbdb71461a05c74ad69119fbcd 699 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 7 697 24.614 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3497_10410 dbef8fdcbf2ff457b4df5a84bbcf128b 322 SUPERFAMILY SSF53448 2 243 2.88E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_10410 dbef8fdcbf2ff457b4df5a84bbcf128b 322 Pfam PF00535 Glycosyl transferase family 2 4 131 3.6E-31 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3497_10410 dbef8fdcbf2ff457b4df5a84bbcf128b 322 Gene3D G3DSA:3.90.550.10 1 254 6.4E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_03350 3629f6f83bff5cb3ad81c5262086ec1d 155 Gene3D G3DSA:2.60.40.2470 33 155 7.3E-41 T 14-10-2018 IPR038162 Ig-like SoxY domain superfamily C3497_03350 3629f6f83bff5cb3ad81c5262086ec1d 155 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 5 155 8.0E-48 T 14-10-2018 IPR016568 Sulphur oxidation, SoxY C3497_03350 3629f6f83bff5cb3ad81c5262086ec1d 155 Pfam PF13501 Sulfur oxidation protein SoxY 53 153 1.3E-29 T 14-10-2018 IPR032711 Ig-like SoxY domain C3497_03350 3629f6f83bff5cb3ad81c5262086ec1d 155 PIRSF PIRSF010312 1 155 2.8E-40 T 14-10-2018 IPR016568 Sulphur oxidation, SoxY C3497_00865 618eae8087eb6e309857058c52f7b9bf 196 Pfam PF01814 Hemerythrin HHE cation binding domain 4 139 3.5E-17 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C3497_00865 618eae8087eb6e309857058c52f7b9bf 196 Gene3D G3DSA:1.20.120.520 1 159 5.4E-29 T 14-10-2018 C3497_03785 540fdd836d10f318949e11b6bf1abc19 451 Gene3D G3DSA:3.10.450.350 63 153 3.7E-12 T 14-10-2018 C3497_03785 540fdd836d10f318949e11b6bf1abc19 451 SUPERFAMILY SSF51261 170 400 2.35E-70 T 14-10-2018 IPR011055 Duplicated hybrid motif C3497_03785 540fdd836d10f318949e11b6bf1abc19 451 Gene3D G3DSA:3.10.450.350 177 419 1.6E-96 T 14-10-2018 C3497_03785 540fdd836d10f318949e11b6bf1abc19 451 Gene3D G3DSA:2.70.70.10 274 404 1.6E-96 T 14-10-2018 IPR011055 Duplicated hybrid motif C3497_03785 540fdd836d10f318949e11b6bf1abc19 451 Pfam PF01551 Peptidase family M23 302 398 1.2E-33 T 14-10-2018 IPR016047 Peptidase M23 C3497_09425 9eda571e8c24b27c0d74ccd544a0f7ef 305 PIRSF PIRSF002849 2 305 4.7E-120 T 14-10-2018 C3497_09425 9eda571e8c24b27c0d74ccd544a0f7ef 305 Gene3D G3DSA:1.10.8.300 197 302 7.7E-27 T 14-10-2018 C3497_09425 9eda571e8c24b27c0d74ccd544a0f7ef 305 SUPERFAMILY SSF52540 16 280 1.45E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_09425 9eda571e8c24b27c0d74ccd544a0f7ef 305 SMART SM00382 33 174 0.0012 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_09425 9eda571e8c24b27c0d74ccd544a0f7ef 305 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.0E-63 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 C3497_09425 9eda571e8c24b27c0d74ccd544a0f7ef 305 Gene3D G3DSA:3.40.50.300 3 196 3.0E-46 T 14-10-2018 C3497_07025 4898cf52fa57939dc0789a018eaff215 519 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 501 42.799 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 C3497_07025 4898cf52fa57939dc0789a018eaff215 519 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 22 483 1.9E-135 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 C3497_08430 10a578088afccb986513ec24f56c81cc 465 Pfam PF00654 Voltage gated chloride channel 91 435 2.5E-79 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C3497_08430 10a578088afccb986513ec24f56c81cc 465 PRINTS PR00762 Chloride channel signature 189 208 9.6E-32 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C3497_08430 10a578088afccb986513ec24f56c81cc 465 PRINTS PR00762 Chloride channel signature 138 157 9.6E-32 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C3497_08430 10a578088afccb986513ec24f56c81cc 465 PRINTS PR00762 Chloride channel signature 385 401 9.6E-32 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C3497_08430 10a578088afccb986513ec24f56c81cc 465 PRINTS PR00762 Chloride channel signature 356 376 9.6E-32 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C3497_08430 10a578088afccb986513ec24f56c81cc 465 PRINTS PR00762 Chloride channel signature 104 121 9.6E-32 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C3497_08430 10a578088afccb986513ec24f56c81cc 465 PRINTS PR00762 Chloride channel signature 403 422 9.6E-32 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C3497_08430 10a578088afccb986513ec24f56c81cc 465 SUPERFAMILY SSF81340 31 447 1.07E-88 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 C3497_08430 10a578088afccb986513ec24f56c81cc 465 Gene3D G3DSA:1.10.3080.10 37 459 1.2E-83 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 C3497_07360 22a8f8b8b29df53666202871fa9d4335 185 SUPERFAMILY SSF55194 1 185 2.75E-70 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 C3497_07360 22a8f8b8b29df53666202871fa9d4335 185 Gene3D G3DSA:1.10.132.20 12 182 7.4E-65 T 14-10-2018 C3497_07360 22a8f8b8b29df53666202871fa9d4335 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.219 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 C3497_07360 22a8f8b8b29df53666202871fa9d4335 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.7E-68 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 C3497_07360 22a8f8b8b29df53666202871fa9d4335 185 Gene3D G3DSA:3.30.1360.40 31 105 7.4E-65 T 14-10-2018 C3497_07360 22a8f8b8b29df53666202871fa9d4335 185 Pfam PF01765 Ribosome recycling factor 20 183 7.8E-62 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 C3497_13095 7603c2ce4e0e94ecaee710d5100c3822 291 SUPERFAMILY SSF54862 49 215 5.34E-24 T 14-10-2018 C3497_13095 7603c2ce4e0e94ecaee710d5100c3822 291 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3497_13095 7603c2ce4e0e94ecaee710d5100c3822 291 Pfam PF12838 4Fe-4S dicluster domain 67 122 4.0E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_13095 7603c2ce4e0e94ecaee710d5100c3822 291 Pfam PF12800 4Fe-4S binding domain 191 203 0.44 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_13095 7603c2ce4e0e94ecaee710d5100c3822 291 Pfam PF12800 4Fe-4S binding domain 143 163 0.016 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3497_13095 7603c2ce4e0e94ecaee710d5100c3822 291 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 15 223 1.2E-79 T 14-10-2018 IPR004494 MauM/NapG ferredoxin-type protein C3497_13095 7603c2ce4e0e94ecaee710d5100c3822 291 Gene3D G3DSA:3.30.70.20 62 139 5.8E-11 T 14-10-2018 C3497_13095 7603c2ce4e0e94ecaee710d5100c3822 291 Gene3D G3DSA:3.30.70.20 142 220 6.2E-8 T 14-10-2018 C3497_07975 94b69f691e793a2747c8b4f1a5e9cf65 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.2E-29 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07975 94b69f691e793a2747c8b4f1a5e9cf65 82 Pfam PF00886 Ribosomal protein S16 8 68 6.9E-25 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07975 94b69f691e793a2747c8b4f1a5e9cf65 82 Gene3D G3DSA:3.30.1320.10 1 82 1.5E-32 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07975 94b69f691e793a2747c8b4f1a5e9cf65 82 SUPERFAMILY SSF54565 1 77 2.22E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_07975 94b69f691e793a2747c8b4f1a5e9cf65 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_07975 94b69f691e793a2747c8b4f1a5e9cf65 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.377 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3497_13950 5b367e1c22f9c1694a643581569f9e8a 260 Gene3D G3DSA:3.30.1600.10 34 173 4.6E-65 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily C3497_13950 5b367e1c22f9c1694a643581569f9e8a 260 SUPERFAMILY SSF52467 5 252 5.45E-71 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C3497_13950 5b367e1c22f9c1694a643581569f9e8a 260 Gene3D G3DSA:3.40.50.1220 16 247 4.6E-65 T 14-10-2018 C3497_13950 5b367e1c22f9c1694a643581569f9e8a 260 Pfam PF02146 Sir2 family 25 199 5.1E-41 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 C3497_14475 4f840043c586b24812b85cc33d4687fc 394 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 12 388 1.7E-140 T 14-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 C3497_14475 4f840043c586b24812b85cc33d4687fc 394 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 13 388 6.0E-144 T 14-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 C3497_14475 4f840043c586b24812b85cc33d4687fc 394 PIRSF PIRSF015557 7 393 7.4E-146 T 14-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 C3497_07500 469911b1a7a0fb9fa39b026691493000 279 SUPERFAMILY SSF51569 2 270 1.56E-104 T 14-10-2018 C3497_07500 469911b1a7a0fb9fa39b026691493000 279 Gene3D G3DSA:3.20.20.70 3 275 3.7E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_07500 469911b1a7a0fb9fa39b026691493000 279 Pfam PF00793 DAHP synthetase I family 8 269 2.7E-64 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3497_07500 469911b1a7a0fb9fa39b026691493000 279 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 270 1.3E-122 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3497_07500 469911b1a7a0fb9fa39b026691493000 279 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 272 52.275 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3497_05985 4e1032874598c6f5c9de0b06b8e59745 106 Pfam PF11333 Protein of unknown function (DUF3135) 4 78 3.0E-22 T 14-10-2018 IPR021482 Protein of unknown function DUF3135 C3497_10095 d938dcd9e08892d3f849e77b9882654d 225 Pfam PF04612 Type II secretion system (T2SS), protein M 7 98 7.4E-6 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 C3497_12055 f6f3dd4bf1bc24466b4261a583283580 657 SUPERFAMILY SSF101898 315 607 1.54E-14 T 14-10-2018 C3497_12055 f6f3dd4bf1bc24466b4261a583283580 657 Pfam PF05787 Bacterial protein of unknown function (DUF839) 70 613 1.2E-191 T 14-10-2018 IPR008557 Protein of unknown function DUF839 C3497_13605 c9dcc369baf439d502c89a888a40e403 184 Gene3D G3DSA:1.20.910.10 1 183 3.7E-38 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 C3497_13605 c9dcc369baf439d502c89a888a40e403 184 SUPERFAMILY SSF48613 5 180 3.02E-31 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 C3497_13605 c9dcc369baf439d502c89a888a40e403 184 Pfam PF01126 Heme oxygenase 5 176 1.2E-7 T 14-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 C3497_00085 161b5f3c3a286f3a07cac7edd7859eab 161 Pfam PF08909 Domain of unknown function (DUF1854) 32 160 1.0E-49 T 14-10-2018 IPR015005 Domain of unknown function DUF1854 C3497_06060 35ad63039d057aed2dece579e00502af 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 C3497_06060 35ad63039d057aed2dece579e00502af 154 SUPERFAMILY SSF53927 2 149 1.96E-58 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C3497_06060 35ad63039d057aed2dece579e00502af 154 Pfam PF14437 MafB19-like deaminase 1 148 2.3E-32 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 C3497_06060 35ad63039d057aed2dece579e00502af 154 Gene3D G3DSA:3.40.140.10 1 153 2.1E-63 T 14-10-2018 C3497_06060 35ad63039d057aed2dece579e00502af 154 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 148 48.118 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 C3497_10565 8347630ca130a886f7d93f76adbc423c 266 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 9 264 34.636 T 14-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 C3497_10565 8347630ca130a886f7d93f76adbc423c 266 Pfam PF02649 Type I GTP cyclohydrolase folE2 9 259 2.2E-82 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 C3497_10565 8347630ca130a886f7d93f76adbc423c 266 Gene3D G3DSA:3.10.270.10 7 263 3.8E-89 T 14-10-2018 C3497_03910 3296c4ae827400ecd88c194532dc133c 265 Gene3D G3DSA:1.25.40.10 34 252 4.1E-62 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_03910 3296c4ae827400ecd88c194532dc133c 265 SUPERFAMILY SSF48452 34 116 5.58E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_03910 3296c4ae827400ecd88c194532dc133c 265 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 250 2.3E-90 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD C3497_03910 3296c4ae827400ecd88c194532dc133c 265 Pfam PF13525 Outer membrane lipoprotein 35 239 6.1E-66 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like C3497_03910 3296c4ae827400ecd88c194532dc133c 265 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 3 245 38.8 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD C3497_08990 4bb98143bd18d8f1bcee5bd306873c63 203 Gene3D G3DSA:1.10.3820.10 22 202 2.2E-40 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily C3497_08990 4bb98143bd18d8f1bcee5bd306873c63 203 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 23 195 1.6E-78 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal C3497_08990 4bb98143bd18d8f1bcee5bd306873c63 203 PIRSF PIRSF000013 3 203 6.7E-98 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 C3497_08990 4bb98143bd18d8f1bcee5bd306873c63 203 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 17 196 2.3E-95 T 14-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 C3497_08990 4bb98143bd18d8f1bcee5bd306873c63 203 SUPERFAMILY SSF48695 20 195 1.4E-63 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily C3497_10155 a874c1533900b87a789438cb2f045092 280 SUPERFAMILY SSF54523 15 122 5.34E-9 T 14-10-2018 C3497_10155 a874c1533900b87a789438cb2f045092 280 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 33 3.4E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10155 a874c1533900b87a789438cb2f045092 280 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 34 6.3E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10155 a874c1533900b87a789438cb2f045092 280 Gene3D G3DSA:3.30.700.10 15 74 5.9E-7 T 14-10-2018 C3497_03900 37dd307d07db7ebdea6846113819183b 120 SUPERFAMILY SSF52091 5 113 1.57E-31 T 14-10-2018 IPR036513 STAS domain superfamily C3497_03900 37dd307d07db7ebdea6846113819183b 120 Gene3D G3DSA:3.40.50.10600 1 113 8.0E-28 T 14-10-2018 IPR038396 SpoIIAA-like superfamily C3497_03900 37dd307d07db7ebdea6846113819183b 120 Pfam PF11964 SpoIIAA-like 11 112 3.0E-18 T 14-10-2018 IPR021866 SpoIIAA-like C3497_02400 3bb8f936a058a3cec28c7f38d5d60fcd 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.5E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_02400 3bb8f936a058a3cec28c7f38d5d60fcd 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.5E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_02400 3bb8f936a058a3cec28c7f38d5d60fcd 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.5E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_02400 3bb8f936a058a3cec28c7f38d5d60fcd 144 SMART SM00422 1 70 3.4E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_02400 3bb8f936a058a3cec28c7f38d5d60fcd 144 Gene3D G3DSA:1.10.1660.10 1 125 1.1E-33 T 14-10-2018 C3497_02400 3bb8f936a058a3cec28c7f38d5d60fcd 144 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 126 2.3E-59 T 14-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 C3497_02400 3bb8f936a058a3cec28c7f38d5d60fcd 144 SUPERFAMILY SSF46955 1 119 8.79E-36 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3497_02400 3bb8f936a058a3cec28c7f38d5d60fcd 144 Pfam PF13411 MerR HTH family regulatory protein 1 67 3.1E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3497_08645 78250ef8341e848878d27859eea24663 43 Pfam PF08173 Membrane bound YbgT-like protein 1 26 1.3E-12 T 14-10-2018 IPR012994 Membrane bound YbgT-like C3497_08645 78250ef8341e848878d27859eea24663 43 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 2.6E-11 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 C3497_05505 69b4e1371f73d9a98ee936d20f2feea6 152 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 131 1.9E-18 T 14-10-2018 C3497_08735 0a646f38387503be03119099d8459e3f 330 Gene3D G3DSA:1.50.10.150 16 328 1.9E-94 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily C3497_08735 0a646f38387503be03119099d8459e3f 330 Pfam PF03595 Voltage-dependent anion channel 21 317 5.7E-57 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 C3497_10390 d68650cc70dd390eee4d9005ecff0c8c 487 Pfam PF13440 Polysaccharide biosynthesis protein 29 320 8.0E-61 T 14-10-2018 C3497_13355 13b51fbba4034a9ba1d0fb04a02071ea 200 SMART SM00464 7 192 3.8E-8 T 14-10-2018 IPR003111 Lon, substrate-binding domain C3497_13355 13b51fbba4034a9ba1d0fb04a02071ea 200 Gene3D G3DSA:2.30.130.40 5 115 2.2E-35 T 14-10-2018 C3497_13355 13b51fbba4034a9ba1d0fb04a02071ea 200 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 8 191 7.6E-17 T 14-10-2018 IPR003111 Lon, substrate-binding domain C3497_13355 13b51fbba4034a9ba1d0fb04a02071ea 200 SUPERFAMILY SSF88697 7 191 8.2E-45 T 14-10-2018 IPR015947 PUA-like superfamily C3497_13355 13b51fbba4034a9ba1d0fb04a02071ea 200 Gene3D G3DSA:1.10.4060.10 119 199 1.2E-14 T 14-10-2018 C3497_06385 edb1d90ec0a81a8ed76803b0bf77368f 438 Pfam PF02646 RmuC family 143 419 7.7E-62 T 14-10-2018 IPR003798 DNA recombination RmuC C3497_08230 3dcfdcfce9c1c00deb649b231c7d26c1 98 TIGRFAM TIGR02620 cas_VVA1548: putative CRISPR-associated protein, VVA1548 family 4 94 5.3E-34 T 14-10-2018 IPR013443 Putative CRISPR-associated protein, VVA1548 family C3497_08230 3dcfdcfce9c1c00deb649b231c7d26c1 98 Pfam PF09652 Putative CRISPR-associated protein (Cas_VVA1548) 4 92 5.4E-38 T 14-10-2018 IPR013443 Putative CRISPR-associated protein, VVA1548 family C3497_12660 0dbaf5086453aaffd44f7a1fe8c9edda 133 Pfam PF03334 Na+/H+ antiporter subunit 12 92 5.1E-25 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 C3497_12660 0dbaf5086453aaffd44f7a1fe8c9edda 133 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 97 2.3E-24 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 C3497_11550 16fa82c12a5a85c5cf977cc885736ff0 345 SUPERFAMILY SSF52540 108 287 9.66E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11550 16fa82c12a5a85c5cf977cc885736ff0 345 Gene3D G3DSA:3.40.50.300 106 312 2.1E-72 T 14-10-2018 C3497_11550 16fa82c12a5a85c5cf977cc885736ff0 345 Pfam PF02562 PhoH-like protein 109 312 1.1E-92 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 C3497_01125 322719b47d6047ef46f01272c594995a 68 Pfam PF06945 Protein of unknown function (DUF1289) 7 30 3.0E-8 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 C3497_04565 d785a9fe2307e2d71de35af620e7f8a5 152 SUPERFAMILY SSF47188 8 129 1.96E-32 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C3497_04565 d785a9fe2307e2d71de35af620e7f8a5 152 ProSitePatterns PS00550 Hemerythrin family signature. 62 85 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 C3497_04565 d785a9fe2307e2d71de35af620e7f8a5 152 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 9 130 7.2E-36 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 C3497_04565 d785a9fe2307e2d71de35af620e7f8a5 152 Pfam PF01814 Hemerythrin HHE cation binding domain 17 128 1.9E-11 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C3497_04565 d785a9fe2307e2d71de35af620e7f8a5 152 Gene3D G3DSA:1.20.120.50 3 135 2.9E-37 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C3497_10775 dd4732690ffc6397a542a81dd935883b 266 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3497_10775 dd4732690ffc6397a542a81dd935883b 266 SMART SM00382 27 221 6.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_10775 dd4732690ffc6397a542a81dd935883b 266 Pfam PF00005 ABC transporter 19 172 1.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3497_10775 dd4732690ffc6397a542a81dd935883b 266 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 241 7.0E-85 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 C3497_10775 dd4732690ffc6397a542a81dd935883b 266 Gene3D G3DSA:3.40.50.300 1 264 7.9E-69 T 14-10-2018 C3497_10775 dd4732690ffc6397a542a81dd935883b 266 SUPERFAMILY SSF52540 2 233 1.55E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_13315 645191e2e3a08ffd16b8bc1e36bc2633 256 PIRSF PIRSF009320 87 255 1.3E-8 T 14-10-2018 C3497_13315 645191e2e3a08ffd16b8bc1e36bc2633 256 PIRSF PIRSF009320 2 53 5.7E-14 T 14-10-2018 C3497_13315 645191e2e3a08ffd16b8bc1e36bc2633 256 Gene3D G3DSA:3.40.50.300 1 255 1.3E-77 T 14-10-2018 C3497_13315 645191e2e3a08ffd16b8bc1e36bc2633 256 Pfam PF13614 AAA domain 3 178 2.8E-60 T 14-10-2018 IPR025669 AAA domain C3497_13315 645191e2e3a08ffd16b8bc1e36bc2633 256 SUPERFAMILY SSF52540 1 254 4.8E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_11745 15ebd8b7fc60f64362bec86d6d07d675 123 SUPERFAMILY SSF69118 6 111 3.8E-29 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C3497_11745 15ebd8b7fc60f64362bec86d6d07d675 123 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 42 89 9.8E-13 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C3497_11745 15ebd8b7fc60f64362bec86d6d07d675 123 Gene3D G3DSA:1.20.1290.10 1 113 8.3E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C3497_11745 15ebd8b7fc60f64362bec86d6d07d675 123 Pfam PF02627 Carboxymuconolactone decarboxylase family 25 107 4.6E-21 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C3497_13545 ee1f98d3265e43f5716e42c169324c5f 67 Pfam PF10636 Hemin uptake protein hemP 32 67 4.1E-16 T 14-10-2018 IPR019600 Hemin uptake protein HemP C3497_13545 ee1f98d3265e43f5716e42c169324c5f 67 Gene3D G3DSA:2.10.70.10 29 67 3.2E-12 T 14-10-2018 C3497_12425 eeba74313fe79deea5e8d7f9b73e3a75 489 Pfam PF00194 Eukaryotic-type carbonic anhydrase 268 487 5.5E-27 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain C3497_12425 eeba74313fe79deea5e8d7f9b73e3a75 489 SMART SM01057 268 489 4.3E-60 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain C3497_12425 eeba74313fe79deea5e8d7f9b73e3a75 489 SUPERFAMILY SSF51069 267 486 6.67E-57 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily C3497_12425 eeba74313fe79deea5e8d7f9b73e3a75 489 Gene3D G3DSA:3.10.200.10 260 489 4.1E-55 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily C3497_10340 ad9604bf9e04cbc2b6913ba158af9c73 223 Gene3D G3DSA:1.25.40.10 79 214 9.0E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_10340 ad9604bf9e04cbc2b6913ba158af9c73 223 SUPERFAMILY SSF48452 121 192 2.18E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3497_07955 f62ef4772c9cf99dc32c39e069a2ccfb 163 SUPERFAMILY SSF52218 1 156 1.97E-34 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3497_07955 f62ef4772c9cf99dc32c39e069a2ccfb 163 Gene3D G3DSA:3.40.50.360 1 160 3.2E-27 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3497_07955 f62ef4772c9cf99dc32c39e069a2ccfb 163 Pfam PF03358 NADPH-dependent FMN reductase 44 105 2.8E-10 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 C3497_12465 e85a4d50f83b23e536e475290f507f60 295 Pfam PF00892 EamA-like transporter family 2 136 8.7E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_12465 e85a4d50f83b23e536e475290f507f60 295 Pfam PF00892 EamA-like transporter family 147 277 2.8E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_12465 e85a4d50f83b23e536e475290f507f60 295 SUPERFAMILY SSF103481 187 278 1.18E-9 T 14-10-2018 C3497_12465 e85a4d50f83b23e536e475290f507f60 295 TIGRFAM TIGR00688 rarD: protein RarD 2 253 2.4E-68 T 14-10-2018 IPR004626 RarD protein GO:0005887 C3497_12465 e85a4d50f83b23e536e475290f507f60 295 SUPERFAMILY SSF103481 39 136 4.71E-11 T 14-10-2018 C3497_01655 7b2a9a6346dba664281f912b52bb70a4 460 Gene3D G3DSA:3.20.20.70 53 387 1.5E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_01655 7b2a9a6346dba664281f912b52bb70a4 460 SUPERFAMILY SSF102114 161 384 1.57E-10 T 14-10-2018 C3497_07430 644b79c6f399c501f24ea3d7f8f8e57b 436 Gene3D G3DSA:3.50.50.60 1 435 9.1E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_07430 644b79c6f399c501f24ea3d7f8f8e57b 436 SUPERFAMILY SSF51905 3 430 3.67E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_07430 644b79c6f399c501f24ea3d7f8f8e57b 436 Pfam PF01593 Flavin containing amine oxidoreductase 14 428 8.9E-29 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 C3497_07430 644b79c6f399c501f24ea3d7f8f8e57b 436 PRINTS PR00419 Adrenodoxin reductase family signature 5 27 1.3E-8 T 14-10-2018 C3497_07430 644b79c6f399c501f24ea3d7f8f8e57b 436 PRINTS PR00419 Adrenodoxin reductase family signature 28 41 1.3E-8 T 14-10-2018 C3497_07430 644b79c6f399c501f24ea3d7f8f8e57b 436 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 6 428 2.9E-145 T 14-10-2018 IPR017830 Hydroxysqualene dehydroxylase HpnE MetaCyc: PWY-7072 C3497_01240 69b0f8fb1b17d3d3bb73da8c9ef13fc7 422 SUPERFAMILY SSF58104 101 371 1.96E-39 T 14-10-2018 C3497_01240 69b0f8fb1b17d3d3bb73da8c9ef13fc7 422 SMART SM00283 116 370 8.9E-13 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_01240 69b0f8fb1b17d3d3bb73da8c9ef13fc7 422 Gene3D G3DSA:1.10.287.950 73 374 3.5E-40 T 14-10-2018 C3497_01240 69b0f8fb1b17d3d3bb73da8c9ef13fc7 422 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 192 293 1.9E-24 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3497_03600 cdb70bfd13f1a2822c71ff526820f0e0 145 Pfam PF00581 Rhodanese-like domain 42 128 9.5E-19 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_03600 cdb70bfd13f1a2822c71ff526820f0e0 145 SMART SM00450 35 132 2.6E-28 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_03600 cdb70bfd13f1a2822c71ff526820f0e0 145 SUPERFAMILY SSF52821 18 137 2.62E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_03600 cdb70bfd13f1a2822c71ff526820f0e0 145 Gene3D G3DSA:3.40.250.10 38 145 1.0E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_10870 468ec4ed89fc1f060a56efeb49f0edc7 262 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 14 226 2.9E-88 T 14-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 C3497_10870 468ec4ed89fc1f060a56efeb49f0edc7 262 Pfam PF08900 Domain of unknown function (DUF1845) 13 223 2.8E-80 T 14-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 C3497_12625 02ee162f7d1dbfb6dc2e331ad27760df 380 Pfam PF00924 Mechanosensitive ion channel 146 350 6.1E-56 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 C3497_12625 02ee162f7d1dbfb6dc2e331ad27760df 380 Gene3D G3DSA:2.30.30.60 205 256 3.8E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily C3497_12625 02ee162f7d1dbfb6dc2e331ad27760df 380 Gene3D G3DSA:3.30.70.100 257 354 5.2E-18 T 14-10-2018 C3497_12625 02ee162f7d1dbfb6dc2e331ad27760df 380 SUPERFAMILY SSF82689 257 361 6.67E-22 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 C3497_12625 02ee162f7d1dbfb6dc2e331ad27760df 380 SUPERFAMILY SSF82861 106 187 2.88E-13 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 C3497_12625 02ee162f7d1dbfb6dc2e331ad27760df 380 SUPERFAMILY SSF50182 188 255 7.52E-17 T 14-10-2018 IPR010920 LSM domain superfamily C3497_12625 02ee162f7d1dbfb6dc2e331ad27760df 380 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 220 254 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 C3497_00835 2ffb4241cef893087b7de0520c4c2328 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.7E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_00835 2ffb4241cef893087b7de0520c4c2328 211 SUPERFAMILY SSF46689 6 83 5.13E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3497_00835 2ffb4241cef893087b7de0520c4c2328 211 SUPERFAMILY SSF48498 84 194 5.97E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C3497_00835 2ffb4241cef893087b7de0520c4c2328 211 Gene3D G3DSA:1.10.10.60 1 52 1.5E-17 T 14-10-2018 C3497_00835 2ffb4241cef893087b7de0520c4c2328 211 Gene3D G3DSA:1.10.357.10 55 198 4.1E-30 T 14-10-2018 C3497_00835 2ffb4241cef893087b7de0520c4c2328 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_00835 2ffb4241cef893087b7de0520c4c2328 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3497_04440 648d116df95d6bf6efb709b52fe155f9 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 2.6E-24 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like C3497_04440 648d116df95d6bf6efb709b52fe155f9 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.914 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 C3497_00280 3cde7b6497a63d6eec2cbf3b9a60e5b2 270 SMART SM00934 17 255 5.7E-50 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_00280 3cde7b6497a63d6eec2cbf3b9a60e5b2 270 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_00280 3cde7b6497a63d6eec2cbf3b9a60e5b2 270 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 268 34.422 T 14-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_00280 3cde7b6497a63d6eec2cbf3b9a60e5b2 270 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 255 8.0E-73 T 14-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3497_00280 3cde7b6497a63d6eec2cbf3b9a60e5b2 270 SUPERFAMILY SSF51366 2 265 1.33E-75 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3497_00280 3cde7b6497a63d6eec2cbf3b9a60e5b2 270 Gene3D G3DSA:3.20.20.70 1 269 1.9E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_00280 3cde7b6497a63d6eec2cbf3b9a60e5b2 270 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 249 2.6E-28 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3497_10865 6db6c0c9df3cb7abd21f19b11997dba4 333 Pfam PF12872 OST-HTH/LOTUS domain 257 321 1.1E-7 T 14-10-2018 IPR025605 OST-HTH/LOTUS domain C3497_00005 45dfdef488c60a0ff8fd2ea0ff2cacb7 368 Pfam PF04143 Sulphur transport 28 354 5.6E-65 T 14-10-2018 IPR007272 Sulphur transport domain C3497_06275 86467a00724bf6ed2380097c33369cbb 186 Pfam PF04891 NifQ 28 183 1.4E-54 T 14-10-2018 IPR006975 NifQ GO:0009399|GO:0030151 C3497_14515 9a73f5199f11cf42499b14360f6ea575 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 160 7.8E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3497_14515 9a73f5199f11cf42499b14360f6ea575 694 Pfam PF00593 TonB dependent receptor 260 691 1.7E-29 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3497_14515 9a73f5199f11cf42499b14360f6ea575 694 Gene3D G3DSA:2.40.170.20 166 694 4.1E-46 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3497_14515 9a73f5199f11cf42499b14360f6ea575 694 SUPERFAMILY SSF56935 40 694 1.92E-91 T 14-10-2018 C3497_14515 9a73f5199f11cf42499b14360f6ea575 694 Gene3D G3DSA:2.170.130.10 35 165 2.3E-33 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3497_02290 a7dfd87f8605b6dbf259c9d3e9e7f17c 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 5 196 27.668 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 C3497_02290 a7dfd87f8605b6dbf259c9d3e9e7f17c 204 Pfam PF01121 Dephospho-CoA kinase 6 183 4.4E-59 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 C3497_02290 a7dfd87f8605b6dbf259c9d3e9e7f17c 204 Gene3D G3DSA:3.40.50.300 2 204 9.6E-68 T 14-10-2018 C3497_02290 a7dfd87f8605b6dbf259c9d3e9e7f17c 204 SUPERFAMILY SSF52540 2 195 3.07E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02290 a7dfd87f8605b6dbf259c9d3e9e7f17c 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 7 191 1.1E-48 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 C3497_06555 82d392e4d4e9baccf382cd53fbfe7ea8 297 Pfam PF00892 EamA-like transporter family 8 141 2.7E-27 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_06555 82d392e4d4e9baccf382cd53fbfe7ea8 297 Pfam PF00892 EamA-like transporter family 156 292 1.1E-25 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_06555 82d392e4d4e9baccf382cd53fbfe7ea8 297 SUPERFAMILY SSF103481 199 294 3.66E-12 T 14-10-2018 C3497_06555 82d392e4d4e9baccf382cd53fbfe7ea8 297 SUPERFAMILY SSF103481 41 144 9.02E-16 T 14-10-2018 C3497_02610 c0cb71fece83e45f066662ff9c6fb165 298 PIRSF PIRSF003097 5 297 7.0E-62 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 C3497_07900 b87f7371070af85a0f6236d7013c8bb3 169 SUPERFAMILY SSF103247 40 137 1.44E-8 T 14-10-2018 IPR035923 TT1751-like domain superfamily C3497_07900 b87f7371070af85a0f6236d7013c8bb3 169 Pfam PF03625 Domain of unknown function DUF302 84 132 3.1E-6 T 14-10-2018 IPR005180 Domain of unknown function DUF302 C3497_06440 1c410203aa32a5f9f37bc1ea05256f37 662 Pfam PF01136 Peptidase family U32 82 311 4.8E-68 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 C3497_06440 1c410203aa32a5f9f37bc1ea05256f37 662 Pfam PF12392 Collagenase 406 519 7.6E-22 T 14-10-2018 IPR020988 Peptidase U32, collagenase C3497_06440 1c410203aa32a5f9f37bc1ea05256f37 662 ProSitePatterns PS01276 Peptidase family U32 signature. 168 186 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 C3497_06440 1c410203aa32a5f9f37bc1ea05256f37 662 SUPERFAMILY SSF51395 20 162 9.52E-6 T 14-10-2018 C3497_06825 fcd54f81b1cdafe5a8d2e26d0c62808f 384 Gene3D G3DSA:3.30.70.360 184 297 8.0E-133 T 14-10-2018 C3497_06825 fcd54f81b1cdafe5a8d2e26d0c62808f 384 Gene3D G3DSA:3.40.630.10 12 367 8.0E-133 T 14-10-2018 C3497_06825 fcd54f81b1cdafe5a8d2e26d0c62808f 384 SUPERFAMILY SSF55031 184 292 3.14E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain C3497_06825 fcd54f81b1cdafe5a8d2e26d0c62808f 384 SUPERFAMILY SSF53187 9 378 1.17E-66 T 14-10-2018 C3497_06825 fcd54f81b1cdafe5a8d2e26d0c62808f 384 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 102 140 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 C3497_06825 fcd54f81b1cdafe5a8d2e26d0c62808f 384 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 7 380 53.019 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 C3497_06825 fcd54f81b1cdafe5a8d2e26d0c62808f 384 Pfam PF07687 Peptidase dimerisation domain 180 287 9.4E-27 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain C3497_06825 fcd54f81b1cdafe5a8d2e26d0c62808f 384 Pfam PF01546 Peptidase family M20/M25/M40 67 377 2.1E-44 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 C3497_06825 fcd54f81b1cdafe5a8d2e26d0c62808f 384 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 10 378 1.9E-166 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 C3497_00645 69c52df2e64a38ac5debb596d236586a 367 Gene3D G3DSA:3.30.420.350 100 348 4.8E-101 T 14-10-2018 C3497_00645 69c52df2e64a38ac5debb596d236586a 367 ProSitePatterns PS01016 Glycoprotease family signature. 85 105 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 C3497_00645 69c52df2e64a38ac5debb596d236586a 367 Gene3D G3DSA:3.30.420.360 13 360 4.8E-101 T 14-10-2018 C3497_05930 031b1e9aa8cde2b20fc8aa7632ce714d 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 66 7.3E-17 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain C3497_05930 031b1e9aa8cde2b20fc8aa7632ce714d 330 SUPERFAMILY SSF103088 179 287 7.46E-19 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_05930 031b1e9aa8cde2b20fc8aa7632ce714d 330 Gene3D G3DSA:3.30.1330.60 130 312 2.7E-57 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3497_05930 031b1e9aa8cde2b20fc8aa7632ce714d 330 Pfam PF00691 OmpA family 183 275 1.8E-11 T 14-10-2018 IPR006665 OmpA-like domain C3497_02095 5637dd0eef8e16a37ab4e3fa466af1d1 102 Pfam PF00034 Cytochrome c 25 102 9.6E-7 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_02095 5637dd0eef8e16a37ab4e3fa466af1d1 102 PRINTS PR00606 Class ID cytochrome C signature 40 53 1.1E-25 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C3497_02095 5637dd0eef8e16a37ab4e3fa466af1d1 102 PRINTS PR00606 Class ID cytochrome C signature 63 76 1.1E-25 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C3497_02095 5637dd0eef8e16a37ab4e3fa466af1d1 102 PRINTS PR00606 Class ID cytochrome C signature 25 38 1.1E-25 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C3497_02095 5637dd0eef8e16a37ab4e3fa466af1d1 102 PRINTS PR00606 Class ID cytochrome C signature 78 88 1.1E-25 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C3497_02095 5637dd0eef8e16a37ab4e3fa466af1d1 102 PRINTS PR00606 Class ID cytochrome C signature 90 100 1.1E-25 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C3497_02095 5637dd0eef8e16a37ab4e3fa466af1d1 102 Gene3D G3DSA:1.10.760.10 22 102 2.0E-34 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_02095 5637dd0eef8e16a37ab4e3fa466af1d1 102 SUPERFAMILY SSF46626 27 101 1.63E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_03705 e4c6f8aff92899dd0acbeb40c83c5cd7 122 Pfam PF02643 Uncharacterized ACR, COG1430 11 112 3.4E-31 T 14-10-2018 IPR003795 Protein of unknown function DUF192 C3497_03705 e4c6f8aff92899dd0acbeb40c83c5cd7 122 Gene3D G3DSA:2.60.120.1140 1 120 8.1E-36 T 14-10-2018 IPR038695 Saro_0823-like superfamily C3497_11475 2d37f619aaeb1806886ea4f4e45818bb 264 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 29 262 5.4E-85 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria C3497_11475 2d37f619aaeb1806886ea4f4e45818bb 264 Pfam PF02405 Permease MlaE 47 257 5.4E-72 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 C3497_13780 1073347c0019ec56f83e1c08dd77c82c 327 SUPERFAMILY SSF50129 2 146 1.73E-44 T 14-10-2018 IPR011032 GroES-like superfamily C3497_13780 1073347c0019ec56f83e1c08dd77c82c 327 Gene3D G3DSA:3.90.180.10 17 323 5.3E-123 T 14-10-2018 C3497_13780 1073347c0019ec56f83e1c08dd77c82c 327 SUPERFAMILY SSF51735 118 289 6.07E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_13780 1073347c0019ec56f83e1c08dd77c82c 327 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 3.9E-141 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI C3497_13780 1073347c0019ec56f83e1c08dd77c82c 327 Gene3D G3DSA:3.40.50.720 126 293 5.3E-123 T 14-10-2018 C3497_13780 1073347c0019ec56f83e1c08dd77c82c 327 SMART SM00829 13 323 9.7E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C3497_13780 1073347c0019ec56f83e1c08dd77c82c 327 Pfam PF00107 Zinc-binding dehydrogenase 159 284 7.0E-14 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C3497_14705 efdaeebf6b87511ed84d840e737c15d2 364 SUPERFAMILY SSF54001 154 276 5.89E-21 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily C3497_14705 efdaeebf6b87511ed84d840e737c15d2 364 Pfam PF01841 Transglutaminase-like superfamily 157 275 1.2E-20 T 14-10-2018 IPR002931 Transglutaminase-like C3497_14705 efdaeebf6b87511ed84d840e737c15d2 364 SMART SM00460 203 277 5.4E-13 T 14-10-2018 IPR002931 Transglutaminase-like C3497_14705 efdaeebf6b87511ed84d840e737c15d2 364 Gene3D G3DSA:3.10.620.30 113 285 3.8E-17 T 14-10-2018 C3497_10465 7b7f3d39cdfb10eb007accb3a1e36214 279 SUPERFAMILY SSF88713 7 253 1.31E-47 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 C3497_10465 7b7f3d39cdfb10eb007accb3a1e36214 279 Pfam PF01522 Polysaccharide deacetylase 39 147 4.9E-21 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 C3497_10465 7b7f3d39cdfb10eb007accb3a1e36214 279 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 7 275 1.8E-137 T 14-10-2018 IPR014344 PEP-CTERM locus, polysaccharide deactylase C3497_10465 7b7f3d39cdfb10eb007accb3a1e36214 279 Gene3D G3DSA:3.20.20.370 3 265 6.6E-49 T 14-10-2018 C3497_10465 7b7f3d39cdfb10eb007accb3a1e36214 279 Pfam PF11959 Domain of unknown function (DUF3473) 149 275 6.4E-55 T 14-10-2018 IPR022560 Domain of unknown function DUF3473 C3497_06165 821d7123b266b69c56687728a3df2504 107 SUPERFAMILY SSF89360 1 96 2.94E-30 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3497_06165 821d7123b266b69c56687728a3df2504 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 1.6E-21 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C3497_06165 821d7123b266b69c56687728a3df2504 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 C3497_06165 821d7123b266b69c56687728a3df2504 107 Gene3D G3DSA:2.60.300.12 1 107 1.5E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3497_06165 821d7123b266b69c56687728a3df2504 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 1.4E-37 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 C3497_04435 7aab305e120b8381df49751f14dedf56 200 Gene3D G3DSA:1.20.120.1200 4 166 2.6E-45 T 14-10-2018 C3497_04435 7aab305e120b8381df49751f14dedf56 200 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 165 1.3E-39 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_03520 5a79b1563b474faeb7f954c524d61cf6 275 PIRSF PIRSF012318 1 272 4.6E-96 T 14-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 C3497_03520 5a79b1563b474faeb7f954c524d61cf6 275 Pfam PF04305 Protein of unknown function (DUF455) 18 261 6.0E-95 T 14-10-2018 IPR007402 Protein of unknown function DUF455 C3497_03520 5a79b1563b474faeb7f954c524d61cf6 275 SUPERFAMILY SSF47240 78 220 2.19E-17 T 14-10-2018 IPR009078 Ferritin-like superfamily C3497_00780 462df90e56a5b97f9fe2b5cf24c0c660 200 SUPERFAMILY SSF51161 2 165 1.37E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3497_00780 462df90e56a5b97f9fe2b5cf24c0c660 200 Gene3D G3DSA:2.160.10.10 3 171 1.2E-50 T 14-10-2018 C3497_00780 462df90e56a5b97f9fe2b5cf24c0c660 200 TIGRFAM TIGR02287 PaaY: phenylacetic acid degradation protein PaaY 3 193 3.4E-104 T 14-10-2018 IPR011974 Phenylacetic acid degradation protein PaaY C3497_00780 462df90e56a5b97f9fe2b5cf24c0c660 200 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 41 4.0E-6 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_00780 462df90e56a5b97f9fe2b5cf24c0c660 200 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 4.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_03110 9b9b3127b518fe941fb0274099c43416 266 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 251 2.0E-85 T 14-10-2018 IPR005226 UPF0014 family C3497_03110 9b9b3127b518fe941fb0274099c43416 266 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 13 257 2.5E-57 T 14-10-2018 IPR005226 UPF0014 family C3497_11350 25723433cba96a0124e856f9ca6df781 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 235 2.7E-55 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 C3497_11350 25723433cba96a0124e856f9ca6df781 248 SUPERFAMILY SSF102705 1 247 3.01E-76 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily C3497_11350 25723433cba96a0124e856f9ca6df781 248 Gene3D G3DSA:3.40.1390.30 97 219 1.2E-76 T 14-10-2018 C3497_11350 25723433cba96a0124e856f9ca6df781 248 Gene3D G3DSA:3.40.1390.30 14 233 1.2E-76 T 14-10-2018 C3497_11350 25723433cba96a0124e856f9ca6df781 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 247 5.9E-60 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 C3497_05885 12a8a20793b8d2d317c8a221897863cb 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 337 2.1E-44 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_04715 87073a3748eec0804e6cef96b46aebad 162 Pfam PF01899 Na+/H+ ion antiporter subunit 22 150 3.3E-24 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 C3497_07390 863d11cda69d4221fd039f3aee855277 170 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 170 73.395 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria C3497_07390 863d11cda69d4221fd039f3aee855277 170 Pfam PF03350 Uncharacterized protein family, UPF0114 12 129 8.4E-36 T 14-10-2018 IPR005134 Uncharacterised protein family UPF0114 C3497_07390 863d11cda69d4221fd039f3aee855277 170 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 7 165 3.4E-48 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria C3497_02570 b0c60b6ce4ca78e6781188ac132bda8c 657 SUPERFAMILY SSF52540 42 345 2.4E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02570 b0c60b6ce4ca78e6781188ac132bda8c 657 Pfam PF00350 Dynamin family 56 272 4.0E-14 T 14-10-2018 IPR022812 Dynamin superfamily C3497_13905 a2b03f45d3a8df6c8c20ed70a5447304 111 Pfam PF08895 Domain of unknown function (DUF1840) 1 109 9.4E-31 T 14-10-2018 IPR014991 Protein of unknown function DUF1840 C3497_07855 1a9fa592499cc47d6fc84b65434de9d2 284 PIRSF PIRSF006648 1 274 1.0E-40 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3497_07855 1a9fa592499cc47d6fc84b65434de9d2 284 TIGRFAM TIGR03861 phenyl_ABC_PedC: alcohol ABC transporter, permease protein 22 276 7.1E-102 T 14-10-2018 IPR022403 Alcohol ABC transporter, permease protein C3497_07855 1a9fa592499cc47d6fc84b65434de9d2 284 Pfam PF01061 ABC-2 type transporter 23 245 2.3E-28 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 C3497_04935 0d764241cc72d1587d463751a586b996 126 SUPERFAMILY SSF64076 1 122 1.19E-37 T 14-10-2018 IPR036748 MTH938-like superfamily C3497_04935 0d764241cc72d1587d463751a586b996 126 Gene3D G3DSA:3.40.1230.10 1 124 7.6E-38 T 14-10-2018 IPR036748 MTH938-like superfamily C3497_04935 0d764241cc72d1587d463751a586b996 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 121 4.0E-32 T 14-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein C3497_06550 156911ba26c40bc94f046f3e08095a8c 258 Gene3D G3DSA:1.10.472.150 19 142 6.1E-42 T 14-10-2018 C3497_06550 156911ba26c40bc94f046f3e08095a8c 258 Gene3D G3DSA:3.40.390.10 143 258 3.7E-38 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 C3497_06550 156911ba26c40bc94f046f3e08095a8c 258 SUPERFAMILY SSF55486 40 245 1.1E-39 T 14-10-2018 C3497_06550 156911ba26c40bc94f046f3e08095a8c 258 Pfam PF06167 Glucose-regulated metallo-peptidase M90 18 242 1.9E-87 T 14-10-2018 IPR010384 MtfA family C3497_05350 4d5adc4ebd94a200eef2c5d201b0b7b3 271 Pfam PF12679 ABC-2 family transporter protein 8 271 1.1E-39 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 Pfam PF00361 Proton-conducting membrane transporter 113 384 1.1E-64 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 771 884 2.0E-22 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 90 110 7.9E-35 T 14-10-2018 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 291 303 7.9E-35 T 14-10-2018 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 62 87 7.9E-35 T 14-10-2018 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 201 222 7.9E-35 T 14-10-2018 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 223 249 7.9E-35 T 14-10-2018 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 Pfam PF13244 Domain of unknown function (DUF4040) 592 656 3.7E-16 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 49 100 1.3E-12 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 479 500 6.3E-5 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 336 358 6.3E-5 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 241 263 6.3E-5 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3497_04700 9d70a48dc0725c91bc812f4a727a9c58 896 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 64 84 6.3E-5 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3497_03655 cdd58cbb85b147691f13b92482f18678 199 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.7E-22 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ C3497_01935 eea07bb93beb695626efba536e8f7a16 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.4E-75 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 Pfam PF00347 Ribosomal protein L6 90 164 7.0E-22 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 Pfam PF00347 Ribosomal protein L6 11 82 7.8E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 SUPERFAMILY SSF56053 1 82 1.58E-24 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.846 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.1E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 5.1E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.1E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 PIRSF PIRSF002162 1 177 4.2E-47 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 SUPERFAMILY SSF56053 83 177 6.81E-37 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 Gene3D G3DSA:3.90.930.12 83 177 3.0E-40 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01935 eea07bb93beb695626efba536e8f7a16 177 Gene3D G3DSA:3.90.930.12 1 82 1.4E-28 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3497_01375 b492167ece3b1240a9ae0896682434b3 328 PIRSF PIRSF005355 21 323 1.6E-48 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 C3497_01375 b492167ece3b1240a9ae0896682434b3 328 Gene3D G3DSA:1.10.357.140 36 188 4.9E-5 T 14-10-2018 C3497_01375 b492167ece3b1240a9ae0896682434b3 328 Pfam PF01040 UbiA prenyltransferase family 44 292 9.6E-31 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 C3497_02130 ce41757788fd57cc6a46bdfd08f0e82e 196 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 10 192 4.9E-70 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 C3497_02130 ce41757788fd57cc6a46bdfd08f0e82e 196 Pfam PF12804 MobA-like NTP transferase domain 12 164 2.2E-35 T 14-10-2018 IPR025877 MobA-like NTP transferase C3497_02130 ce41757788fd57cc6a46bdfd08f0e82e 196 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 8 195 27.433 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 C3497_02130 ce41757788fd57cc6a46bdfd08f0e82e 196 Gene3D G3DSA:3.90.550.10 8 194 8.3E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_02130 ce41757788fd57cc6a46bdfd08f0e82e 196 SUPERFAMILY SSF53448 10 192 2.48E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_13380 6ac87b6f8c73cf762b95fa4839222ed0 379 Pfam PF00149 Calcineurin-like phosphoesterase 3 120 9.2E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C3497_13380 6ac87b6f8c73cf762b95fa4839222ed0 379 SUPERFAMILY SSF56300 1 286 3.94E-34 T 14-10-2018 C3497_13380 6ac87b6f8c73cf762b95fa4839222ed0 379 Gene3D G3DSA:3.60.21.10 1 243 2.5E-30 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C3497_13380 6ac87b6f8c73cf762b95fa4839222ed0 379 PIRSF PIRSF033093 1 371 9.2E-88 T 14-10-2018 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type C3497_07520 b070044c7bb6960613eb36214c5c0bba 86 Pfam PF14076 Domain of unknown function (DUF4258) 9 77 1.1E-11 T 14-10-2018 IPR025354 Protein of unknown function DUF4258 C3497_09995 9487cc530bc94a8a502199882c8b0c61 171 Pfam PF05751 FixH 16 154 1.3E-38 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH C3497_10495 cfe37109fd3a5b9dc89b85a762244cfa 193 Gene3D G3DSA:3.30.1950.10 35 102 3.2E-12 T 14-10-2018 C3497_10495 cfe37109fd3a5b9dc89b85a762244cfa 193 Pfam PF02563 Polysaccharide biosynthesis/export protein 25 99 1.3E-20 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 C3497_10495 cfe37109fd3a5b9dc89b85a762244cfa 193 TIGRFAM TIGR03027 pepcterm_export: putative polysaccharide export protein, PEP-CTERM sytem-associated 30 193 4.2E-77 T 14-10-2018 IPR017477 PEP-CTERM, putative polysaccharide export protein C3497_10495 cfe37109fd3a5b9dc89b85a762244cfa 193 Gene3D G3DSA:3.10.560.10 103 190 1.5E-17 T 14-10-2018 C3497_03760 7dded5f103ef2701dd9c278390848797 140 Pfam PF02566 OsmC-like protein 36 133 3.5E-15 T 14-10-2018 IPR003718 OsmC/Ohr family C3497_03760 7dded5f103ef2701dd9c278390848797 140 Gene3D G3DSA:2.20.25.10 1 36 3.7E-7 T 14-10-2018 C3497_03760 7dded5f103ef2701dd9c278390848797 140 SUPERFAMILY SSF82784 1 139 6.15E-38 T 14-10-2018 IPR036102 OsmC/Ohr superfamily C3497_03760 7dded5f103ef2701dd9c278390848797 140 Gene3D G3DSA:3.30.300.20 41 140 2.5E-27 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3497_10670 aa49716985a76d0790cc762ecf344f43 421 SUPERFAMILY SSF56954 5 420 1.18E-51 T 14-10-2018 C3497_10670 aa49716985a76d0790cc762ecf344f43 421 Gene3D G3DSA:1.20.1600.10 16 419 1.0E-51 T 14-10-2018 C3497_10670 aa49716985a76d0790cc762ecf344f43 421 Pfam PF02321 Outer membrane efflux protein 245 417 6.1E-15 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_10670 aa49716985a76d0790cc762ecf344f43 421 Pfam PF02321 Outer membrane efflux protein 40 217 1.7E-9 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_00465 f33f4ca3c20fddef755536d1d28b0f4b 141 SUPERFAMILY SSF53850 10 129 1.09E-9 T 14-10-2018 C3497_00465 f33f4ca3c20fddef755536d1d28b0f4b 141 Gene3D G3DSA:3.40.190.10 23 139 1.2E-5 T 14-10-2018 C3497_06040 fa961ef55a627dad0546ad8b9c647b25 143 Gene3D G3DSA:2.60.40.790 4 143 6.3E-31 T 14-10-2018 IPR008978 HSP20-like chaperone C3497_06040 fa961ef55a627dad0546ad8b9c647b25 143 SUPERFAMILY SSF49764 24 142 4.19E-31 T 14-10-2018 IPR008978 HSP20-like chaperone C3497_06040 fa961ef55a627dad0546ad8b9c647b25 143 Pfam PF00011 Hsp20/alpha crystallin family 48 143 3.9E-20 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain C3497_10780 258ef882fa0e7d16b9f2d7061024c19c 341 Gene3D G3DSA:1.10.3720.10 141 340 3.1E-34 T 14-10-2018 IPR035906 MetI-like superfamily C3497_10780 258ef882fa0e7d16b9f2d7061024c19c 341 SUPERFAMILY SSF161098 150 333 4.06E-36 T 14-10-2018 IPR035906 MetI-like superfamily C3497_10780 258ef882fa0e7d16b9f2d7061024c19c 341 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 126 340 3.0E-77 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 C3497_10780 258ef882fa0e7d16b9f2d7061024c19c 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 169 340 9.2E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_03010 7f8261022fd8fd0ad87235a92b1b58eb 196 SUPERFAMILY SSF64438 18 165 6.68E-42 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic C3497_03010 7f8261022fd8fd0ad87235a92b1b58eb 196 Gene3D G3DSA:3.30.1330.200 14 171 1.4E-44 T 14-10-2018 IPR038592 CheD-like superfamily C3497_03010 7f8261022fd8fd0ad87235a92b1b58eb 196 Pfam PF03975 CheD chemotactic sensory transduction 58 162 5.4E-27 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 C3497_03010 7f8261022fd8fd0ad87235a92b1b58eb 196 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 12 166 25.65 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 C3497_14455 f6c3618d994667508a008948ed8b4c47 151 Gene3D G3DSA:2.40.50.140 81 151 1.1E-7 T 14-10-2018 C3497_14455 f6c3618d994667508a008948ed8b4c47 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 11 150 3.1E-15 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain C3497_14455 f6c3618d994667508a008948ed8b4c47 151 SUPERFAMILY SSF141322 85 151 6.67E-7 T 14-10-2018 C3497_12090 4d2bbe1737346f679bc92aa26e3d4cd9 142 Pfam PF05258 Protein of unknown function (DUF721) 14 88 4.7E-13 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 C3497_03640 59c5801b1b35920b07597edc53a48dac 416 Gene3D G3DSA:3.40.640.10 37 286 1.5E-182 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3497_03640 59c5801b1b35920b07597edc53a48dac 416 SUPERFAMILY SSF53383 5 415 3.06E-176 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3497_03640 59c5801b1b35920b07597edc53a48dac 416 Gene3D G3DSA:3.90.1150.10 10 392 1.5E-182 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3497_03640 59c5801b1b35920b07597edc53a48dac 416 PIRSF PIRSF000412 1 416 7.6E-164 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C3497_03640 59c5801b1b35920b07597edc53a48dac 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C3497_03640 59c5801b1b35920b07597edc53a48dac 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 415 51.448 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C3497_03640 59c5801b1b35920b07597edc53a48dac 416 Pfam PF00464 Serine hydroxymethyltransferase 8 384 2.2E-167 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C3497_06965 afd41cc11b54c588acd6c9f3845d48bc 461 Pfam PF07804 HipA-like C-terminal domain 206 425 3.0E-46 T 14-10-2018 IPR012893 HipA-like, C-terminal C3497_03730 d72251da11d33d1012fa90245bca7cb3 266 SUPERFAMILY SSF52540 39 222 1.37E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_03730 d72251da11d33d1012fa90245bca7cb3 266 Gene3D G3DSA:3.40.50.300 35 253 5.7E-15 T 14-10-2018 C3497_05635 d9b3a1f91494afeeb81330a41f03239d 190 Pfam PF01810 LysE type translocator 8 186 2.3E-37 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3497_05635 d9b3a1f91494afeeb81330a41f03239d 190 PIRSF PIRSF006324 1 189 3.6E-41 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3497_05195 8a9290a451c38cf7fc3316e625d2e2bf 149 Pfam PF04519 Polymer-forming cytoskeletal 17 117 3.4E-24 T 14-10-2018 IPR007607 Bactofilin A/B C3497_03225 fe693a3055472b49611053992891df36 150 PIRSF PIRSF000709 2 72 4.0E-5 T 14-10-2018 C3497_03225 fe693a3055472b49611053992891df36 150 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 67 5.5E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3497_03225 fe693a3055472b49611053992891df36 150 SMART SM00855 2 106 9.7E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3497_03225 fe693a3055472b49611053992891df36 150 SUPERFAMILY SSF53254 3 130 1.44E-20 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3497_03225 fe693a3055472b49611053992891df36 150 Gene3D G3DSA:3.40.50.1240 1 149 3.7E-29 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3497_07450 c9b7acdd0cb8ed4b14aee6b870059382 111 Pfam PF11743 Protein of unknown function (DUF3301) 6 98 3.9E-30 T 14-10-2018 IPR021732 Protein of unknown function DUF3301 C3497_12675 8ba7bad155bde80795d46d07416ec6dd 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 131 150 6.0E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_12675 8ba7bad155bde80795d46d07416ec6dd 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 6.0E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_12675 8ba7bad155bde80795d46d07416ec6dd 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 161 185 6.0E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_12675 8ba7bad155bde80795d46d07416ec6dd 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 6.0E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_12675 8ba7bad155bde80795d46d07416ec6dd 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 6.0E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_12675 8ba7bad155bde80795d46d07416ec6dd 507 Pfam PF00361 Proton-conducting membrane transporter 127 421 9.5E-39 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04900 dfeb22036c0388312137b7ad309601cb 113 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 3 91 5.0E-17 T 14-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 C3497_04900 dfeb22036c0388312137b7ad309601cb 113 PIRSF PIRSF020408 1 104 2.5E-37 T 14-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 C3497_08615 31ab2f7ea3f0f7513699f79e4619d812 283 Pfam PF04055 Radical SAM superfamily 42 205 1.4E-7 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3497_08615 31ab2f7ea3f0f7513699f79e4619d812 283 SUPERFAMILY SSF102114 38 210 1.7E-16 T 14-10-2018 C3497_08615 31ab2f7ea3f0f7513699f79e4619d812 283 Gene3D G3DSA:3.20.20.70 36 234 1.0E-16 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_11460 711b11bd5cb43c28a639d9aa6f194d31 204 Gene3D G3DSA:3.10.450.50 30 166 7.6E-64 T 14-10-2018 C3497_11460 711b11bd5cb43c28a639d9aa6f194d31 204 Gene3D G3DSA:1.10.10.640 67 191 7.6E-64 T 14-10-2018 C3497_11460 711b11bd5cb43c28a639d9aa6f194d31 204 Pfam PF05494 MlaC protein 30 192 5.1E-61 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC C3497_11460 711b11bd5cb43c28a639d9aa6f194d31 204 PIRSF PIRSF004649 1 204 2.1E-60 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC C3497_07600 1c5d702b570975799943d765ed684411 400 Gene3D G3DSA:1.20.81.30 252 365 1.0E-26 T 14-10-2018 C3497_07600 1c5d702b570975799943d765ed684411 400 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 398 1.2E-145 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 C3497_07600 1c5d702b570975799943d765ed684411 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 380 399 1.2E-26 T 14-10-2018 IPR003004 GspF/PilC family C3497_07600 1c5d702b570975799943d765ed684411 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 364 378 1.2E-26 T 14-10-2018 IPR003004 GspF/PilC family C3497_07600 1c5d702b570975799943d765ed684411 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 161 189 1.2E-26 T 14-10-2018 IPR003004 GspF/PilC family C3497_07600 1c5d702b570975799943d765ed684411 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 62 74 1.2E-26 T 14-10-2018 IPR003004 GspF/PilC family C3497_07600 1c5d702b570975799943d765ed684411 400 Pfam PF00482 Type II secretion system (T2SS), protein F 269 390 3.1E-28 T 14-10-2018 IPR018076 Type II secretion system F domain C3497_07600 1c5d702b570975799943d765ed684411 400 Pfam PF00482 Type II secretion system (T2SS), protein F 67 189 6.1E-28 T 14-10-2018 IPR018076 Type II secretion system F domain C3497_07600 1c5d702b570975799943d765ed684411 400 Gene3D G3DSA:1.20.81.30 51 168 2.6E-26 T 14-10-2018 C3497_00470 3daea91307c16f6017a2395be3aef09e 388 SUPERFAMILY SSF56935 4 388 2.26E-17 T 14-10-2018 C3497_08365 f72851d05a9ba818ee51a5717f352f75 237 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 209 2.7E-75 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 C3497_08365 f72851d05a9ba818ee51a5717f352f75 237 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 200 2.5E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_08365 f72851d05a9ba818ee51a5717f352f75 237 PIRSF PIRSF006102 2 219 2.3E-70 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 C3497_08365 f72851d05a9ba818ee51a5717f352f75 237 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 3 210 25.738 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 C3497_11135 747a89f83fbb5bbf7715efff5329af0f 155 SUPERFAMILY SSF52540 16 113 4.5E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_04135 cedac5941641556bb8a155f354eca37c 164 PIRSF PIRSF001467 1 163 6.3E-28 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 C3497_04135 cedac5941641556bb8a155f354eca37c 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 C3497_04135 cedac5941641556bb8a155f354eca37c 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 2.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3497_04135 cedac5941641556bb8a155f354eca37c 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 2.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3497_04135 cedac5941641556bb8a155f354eca37c 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 2.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3497_04135 cedac5941641556bb8a155f354eca37c 164 SUPERFAMILY SSF50891 3 163 2.34E-60 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C3497_04135 cedac5941641556bb8a155f354eca37c 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 162 3.2E-49 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3497_04135 cedac5941641556bb8a155f354eca37c 164 Gene3D G3DSA:2.40.100.10 1 164 5.9E-71 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C3497_07300 48ab774ce546643d4794068d0dcef02e 151 Pfam PF05425 Copper resistance protein D 48 145 5.7E-11 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 C3497_01660 6fab70e8b18ed08869f898c943825dbf 158 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 122 3.2E-22 T 14-10-2018 C3497_01660 6fab70e8b18ed08869f898c943825dbf 158 SUPERFAMILY SSF54593 4 147 1.73E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3497_01660 6fab70e8b18ed08869f898c943825dbf 158 Gene3D G3DSA:3.10.180.10 7 147 6.9E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3497_10010 7f6eb96736675aed9949b0406b7280fe 62 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 7 45 5.0E-10 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component C3497_01705 ae79ed7cf80df610c3591d4a6456f647 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 330 2.0E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_14000 4a962d98140bea3f32d1425a14aca5e7 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 276 3.6E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_08870 65ba02cffe97314bd3afe2592e39ee5a 374 Pfam PF01594 AI-2E family transporter 17 345 1.8E-40 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like C3497_11605 3f99390bce6e04f4b531c52a55a02078 366 Pfam PF13808 DDE_Tnp_1-associated 7 83 1.4E-25 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C3497_11605 3f99390bce6e04f4b531c52a55a02078 366 Pfam PF01609 Transposase DDE domain 64 329 6.0E-20 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_02460 e670585ee848e1640e21a29a6cffff55 524 SMART SM00382 287 438 1.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3497_02460 e670585ee848e1640e21a29a6cffff55 524 SUPERFAMILY SSF52540 285 508 4.07E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_02460 e670585ee848e1640e21a29a6cffff55 524 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 291 429 6.4E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3497_02460 e670585ee848e1640e21a29a6cffff55 524 Gene3D G3DSA:3.40.50.300 253 432 1.1E-29 T 14-10-2018 C3497_03930 d231b5c438e74367328583b736944f7d 580 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 94 261 1.3E-69 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 C3497_03930 d231b5c438e74367328583b736944f7d 580 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 54 578 7.4E-221 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 C3497_03930 d231b5c438e74367328583b736944f7d 580 SUPERFAMILY SSF53474 220 502 8.41E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_03930 d231b5c438e74367328583b736944f7d 580 Gene3D G3DSA:3.40.50.1820 250 511 5.4E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3497_10255 897eab85349d320083c727d3ddaee4e2 257 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 219 3.3E-24 T 14-10-2018 C3497_01115 adb8d9b8f32bcc3401e2ff0b4bc0ea58 308 SUPERFAMILY SSF51569 2 298 4.98E-73 T 14-10-2018 C3497_01115 adb8d9b8f32bcc3401e2ff0b4bc0ea58 308 Gene3D G3DSA:3.20.20.70 1 303 1.8E-140 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_01115 adb8d9b8f32bcc3401e2ff0b4bc0ea58 308 Pfam PF00682 HMGL-like 7 282 2.2E-55 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C3497_10245 f02b2a2d6f2ee4cc229c7344ed84c61f 251 Pfam PF01863 Protein of unknown function DUF45 27 231 3.1E-57 T 14-10-2018 IPR002725 Protein of unknown function DUF45 C3497_10245 f02b2a2d6f2ee4cc229c7344ed84c61f 251 Gene3D G3DSA:3.30.2010.10 145 232 2.9E-15 T 14-10-2018 C3497_04720 654670fd085c77ec289bc3a08e618933 112 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 37 85 4.8E-12 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 C3497_04875 b7d173587a8c48b9a3fde42b1157cc0a 246 SUPERFAMILY SSF51695 8 243 1.23E-63 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 C3497_04875 b7d173587a8c48b9a3fde42b1157cc0a 246 Gene3D G3DSA:3.20.20.190 3 246 1.6E-72 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 C3497_04875 b7d173587a8c48b9a3fde42b1157cc0a 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 15 242 2.3E-36 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 C3497_12915 e4febbab1205da5ea68017faca5a5567 248 Pfam PF08241 Methyltransferase domain 50 136 9.6E-16 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C3497_12915 e4febbab1205da5ea68017faca5a5567 248 Gene3D G3DSA:3.40.50.150 30 180 2.7E-25 T 14-10-2018 C3497_12915 e4febbab1205da5ea68017faca5a5567 248 SUPERFAMILY SSF53335 43 179 9.34E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3497_02465 2b53b9d11f0f77d43e8131250b2549eb 245 SUPERFAMILY SSF47413 15 65 1.16E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3497_13525 bd2ccf74e982a5c11ee8c086db738a4e 255 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 211 7.9E-37 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C3497_14465 50e5021e113ec8d15be29487c7d50bac 155 Gene3D G3DSA:3.30.530.20 1 154 3.1E-54 T 14-10-2018 IPR023393 START-like domain superfamily C3497_14465 50e5021e113ec8d15be29487c7d50bac 155 SUPERFAMILY SSF55961 1 150 1.37E-48 T 14-10-2018 C3497_14465 50e5021e113ec8d15be29487c7d50bac 155 Pfam PF08982 Domain of unknown function (DUF1857) 8 152 5.1E-31 T 14-10-2018 IPR015075 Acetylaranotin biosynthesis cluster protein L C3497_00715 397bfc52125c3e3a162d38fcc0ddb972 372 Gene3D G3DSA:3.20.20.70 1 372 6.9E-155 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3497_00715 397bfc52125c3e3a162d38fcc0ddb972 372 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 348 5.3E-83 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 C3497_00715 397bfc52125c3e3a162d38fcc0ddb972 372 SUPERFAMILY SSF51395 1 370 1.74E-119 T 14-10-2018 C3497_13925 bd230528bfbd8f69bd2fa7d5d49b76d8 255 Pfam PF00563 EAL domain 26 247 5.0E-45 T 14-10-2018 IPR001633 EAL domain C3497_13925 bd230528bfbd8f69bd2fa7d5d49b76d8 255 Gene3D G3DSA:3.20.20.450 12 254 3.7E-61 T 14-10-2018 IPR035919 EAL domain superfamily C3497_13925 bd230528bfbd8f69bd2fa7d5d49b76d8 255 SUPERFAMILY SSF141868 26 248 1.83E-55 T 14-10-2018 IPR035919 EAL domain superfamily C3497_13925 bd230528bfbd8f69bd2fa7d5d49b76d8 255 SMART SM00052 15 252 8.2E-30 T 14-10-2018 IPR001633 EAL domain C3497_11225 ae301e2a884110ca4352b9c9219d7356 124 Pfam PF12553 Protein of unknown function (DUF3742) 1 123 5.0E-50 T 14-10-2018 IPR022213 Protein of unknown function DUF3742 C3497_07560 c3d036bc52ca230c95f8cc0bf68f0ddb 234 Pfam PF01203 Type II secretion system (T2SS), protein N 25 193 1.4E-8 T 14-10-2018 IPR022792 Type II secretion system, protein N C3497_10415 68fb46c36eaad569e31e8c1aea6f72d5 320 Pfam PF01522 Polysaccharide deacetylase 72 273 5.0E-27 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 C3497_10415 68fb46c36eaad569e31e8c1aea6f72d5 320 SUPERFAMILY SSF88713 52 294 1.98E-31 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 C3497_12380 da188c3c6af7cb75b95174e9cfc9c4e2 425 Gene3D G3DSA:3.40.50.2000 220 401 2.6E-60 T 14-10-2018 C3497_12380 da188c3c6af7cb75b95174e9cfc9c4e2 425 Pfam PF00534 Glycosyl transferases group 1 285 397 1.9E-6 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3497_12380 da188c3c6af7cb75b95174e9cfc9c4e2 425 Gene3D G3DSA:3.40.50.11720 37 210 3.7E-47 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 C3497_12380 da188c3c6af7cb75b95174e9cfc9c4e2 425 SUPERFAMILY SSF53756 56 415 1.66E-14 T 14-10-2018 C3497_12380 da188c3c6af7cb75b95174e9cfc9c4e2 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 1.6E-62 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 C3497_04355 98431cd8143e19abc9bf720b5204bf27 133 Pfam PF09345 Domain of unknown function (DUF1987) 6 129 1.4E-35 T 14-10-2018 IPR018530 Domain of unknown function DUF1987 C3497_00690 0ac6236f04cb5867d56e3061dcf403d9 206 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 9 153 1.0E-45 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C3497_00690 0ac6236f04cb5867d56e3061dcf403d9 206 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 8 159 8.2E-62 T 14-10-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 C3497_00690 0ac6236f04cb5867d56e3061dcf403d9 206 Gene3D G3DSA:3.40.50.1450 8 167 8.9E-41 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily C3497_00690 0ac6236f04cb5867d56e3061dcf403d9 206 PRINTS PR00446 Hydrogen uptake protein signature 61 71 3.0E-33 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C3497_00690 0ac6236f04cb5867d56e3061dcf403d9 206 PRINTS PR00446 Hydrogen uptake protein signature 40 57 3.0E-33 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C3497_00690 0ac6236f04cb5867d56e3061dcf403d9 206 PRINTS PR00446 Hydrogen uptake protein signature 8 20 3.0E-33 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C3497_00690 0ac6236f04cb5867d56e3061dcf403d9 206 PRINTS PR00446 Hydrogen uptake protein signature 20 31 3.0E-33 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C3497_00690 0ac6236f04cb5867d56e3061dcf403d9 206 PRINTS PR00446 Hydrogen uptake protein signature 72 88 3.0E-33 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C3497_00690 0ac6236f04cb5867d56e3061dcf403d9 206 Pfam PF01750 Hydrogenase maturation protease 25 152 5.8E-39 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C3497_00690 0ac6236f04cb5867d56e3061dcf403d9 206 SUPERFAMILY SSF53163 7 164 2.48E-46 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily C3497_14085 9c9574261038005c4d7be78ac25cb35b 222 Gene3D G3DSA:3.30.70.2660 1 221 7.7E-67 T 14-10-2018 C3497_14085 9c9574261038005c4d7be78ac25cb35b 222 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 3 184 2.2E-50 T 14-10-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 C3497_14085 9c9574261038005c4d7be78ac25cb35b 222 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 3 209 4.9E-54 T 14-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 C3497_14085 9c9574261038005c4d7be78ac25cb35b 222 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 45 2.1E-11 T 14-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal C3497_08955 9203a6764110bd5b374f210d7ef2f810 159 Gene3D G3DSA:1.10.10.10 12 64 1.2E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_08955 9203a6764110bd5b374f210d7ef2f810 159 Gene3D G3DSA:3.30.70.3460 77 158 3.2E-16 T 14-10-2018 C3497_08955 9203a6764110bd5b374f210d7ef2f810 159 Pfam PF13404 AsnC-type helix-turn-helix domain 12 55 3.4E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 C3497_13735 ff0a27a9fcbfae38206965d272294d1d 464 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 462 4.1E-124 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 C3497_13735 ff0a27a9fcbfae38206965d272294d1d 464 Gene3D G3DSA:2.20.200.10 98 351 6.6E-137 T 14-10-2018 C3497_13735 ff0a27a9fcbfae38206965d272294d1d 464 Gene3D G3DSA:1.20.1600.10 52 462 6.6E-137 T 14-10-2018 C3497_13735 ff0a27a9fcbfae38206965d272294d1d 464 Pfam PF02321 Outer membrane efflux protein 280 460 2.7E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_13735 ff0a27a9fcbfae38206965d272294d1d 464 Pfam PF02321 Outer membrane efflux protein 62 251 5.4E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3497_13735 ff0a27a9fcbfae38206965d272294d1d 464 SUPERFAMILY SSF56954 3 464 2.88E-111 T 14-10-2018 C3497_12810 d9e76eb66df5257e2ab53815f4e11353 426 Pfam PF04932 O-Antigen ligase 192 354 6.6E-14 T 14-10-2018 IPR007016 O-antigen ligase-related C3497_00145 377902e1978f49592929e94f30e3da25 670 Pfam PF07793 Protein of unknown function (DUF1631) 18 244 2.3E-24 T 14-10-2018 IPR012434 Protein of unknown function DUF1631 C3497_00145 377902e1978f49592929e94f30e3da25 670 Pfam PF07793 Protein of unknown function (DUF1631) 246 654 1.8E-86 T 14-10-2018 IPR012434 Protein of unknown function DUF1631 C3497_01505 29eb85b86d0eecf711bfc00fb399ffae 187 PIRSF PIRSF005413 1 182 2.9E-64 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01505 29eb85b86d0eecf711bfc00fb399ffae 187 Gene3D G3DSA:2.60.370.10 51 179 2.1E-45 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01505 29eb85b86d0eecf711bfc00fb399ffae 187 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 170 1.3E-50 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_01505 29eb85b86d0eecf711bfc00fb399ffae 187 SUPERFAMILY SSF110111 53 173 1.16E-46 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_12545 a3b86ba23d9a2fc4a7d4d1a02a355b4b 77 Pfam PF05534 HicB family 4 33 3.2E-7 T 14-10-2018 IPR008651 Uncharacterised protein family HicB C3497_12545 a3b86ba23d9a2fc4a7d4d1a02a355b4b 77 SUPERFAMILY SSF47598 2 41 2.26E-8 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C3497_08685 dd77696fbf10f998885c1acbe69c9041 193 SUPERFAMILY SSF56024 32 177 8.97E-29 T 14-10-2018 C3497_08685 dd77696fbf10f998885c1acbe69c9041 193 Gene3D G3DSA:3.30.870.10 27 178 2.8E-37 T 14-10-2018 C3497_08685 dd77696fbf10f998885c1acbe69c9041 193 Pfam PF13091 PLD-like domain 44 170 3.8E-22 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3497_02410 343e7ab7bcf0efedada71da2be44a1e4 252 Pfam PF02535 ZIP Zinc transporter 90 241 1.6E-9 T 14-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 C3497_02810 962be34ee394018dc6d2451b7e71f179 81 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 7.4E-29 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 C3497_02810 962be34ee394018dc6d2451b7e71f179 81 Pfam PF17209 Hfq protein 8 70 1.1E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 C3497_02810 962be34ee394018dc6d2451b7e71f179 81 SUPERFAMILY SSF50182 8 70 6.35E-24 T 14-10-2018 IPR010920 LSM domain superfamily C3497_02810 962be34ee394018dc6d2451b7e71f179 81 Gene3D G3DSA:2.30.30.100 1 78 1.4E-33 T 14-10-2018 C3497_02810 962be34ee394018dc6d2451b7e71f179 81 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.867 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 C3497_06585 4352d1abe7f933b6fcecb2b7fa56e761 317 Pfam PF02470 MlaD protein 42 112 3.2E-14 T 14-10-2018 IPR003399 Mce/MlaD C3497_07120 4a06315d24569b2a8a200c878c68a3b6 327 Pfam PF01609 Transposase DDE domain 137 311 6.4E-28 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_07120 4a06315d24569b2a8a200c878c68a3b6 327 Pfam PF05598 Transposase domain (DUF772) 50 124 7.4E-22 T 14-10-2018 IPR008490 Transposase InsH, N-terminal C3497_08470 3d2cd3924e11376a0d864dca78117861 314 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 310 3.9E-104 T 14-10-2018 IPR007296 Domain of unknown function DUF403 C3497_05775 3f7dbcfa18d827fb3803f4c295db22da 122 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 113 1.1E-27 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR C3497_05775 3f7dbcfa18d827fb3803f4c295db22da 122 SUPERFAMILY SSF52833 4 114 8.31E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_05775 3f7dbcfa18d827fb3803f4c295db22da 122 Gene3D G3DSA:3.40.30.10 3 116 1.4E-40 T 14-10-2018 C3497_05775 3f7dbcfa18d827fb3803f4c295db22da 122 Pfam PF03960 ArsC family 10 111 2.8E-16 T 14-10-2018 IPR006660 Arsenate reductase-like C3497_13630 83a14b3f8b71b7cde19657c4396da6cd 159 Pfam PF04608 Phosphatidylglycerophosphatase A 13 154 1.2E-46 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 C3497_13630 83a14b3f8b71b7cde19657c4396da6cd 159 SUPERFAMILY SSF101307 7 154 1.7E-35 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 C3497_13630 83a14b3f8b71b7cde19657c4396da6cd 159 PIRSF PIRSF006162 4 159 1.3E-40 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 C3497_13245 47fb0957eb5d2acfd5d9da5cd40bca10 275 Gene3D G3DSA:3.10.450.240 149 273 1.3E-5 T 14-10-2018 C3497_13245 47fb0957eb5d2acfd5d9da5cd40bca10 275 Pfam PF04280 Tim44-like domain 150 273 2.7E-17 T 14-10-2018 IPR007379 Tim44-like domain C3497_13245 47fb0957eb5d2acfd5d9da5cd40bca10 275 SUPERFAMILY SSF54427 151 274 9.64E-12 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3497_13245 47fb0957eb5d2acfd5d9da5cd40bca10 275 SMART SM00978 145 273 2.4E-45 T 14-10-2018 IPR007379 Tim44-like domain C3497_12430 ea1b9d3defc8a89453bb1e9ee3254c0e 298 Pfam PF08543 Phosphomethylpyrimidine kinase 20 275 1.7E-84 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 C3497_12430 ea1b9d3defc8a89453bb1e9ee3254c0e 298 Gene3D G3DSA:3.40.1190.20 2 288 1.4E-94 T 14-10-2018 IPR029056 Ribokinase-like C3497_12430 ea1b9d3defc8a89453bb1e9ee3254c0e 298 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 13 277 3.2E-88 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3497_12430 ea1b9d3defc8a89453bb1e9ee3254c0e 298 SUPERFAMILY SSF53613 9 281 3.44E-72 T 14-10-2018 IPR029056 Ribokinase-like C3497_13820 198941d3e40dc7f719637a42ddeb4bd6 226 Gene3D G3DSA:1.10.1760.20 1 210 7.3E-6 T 14-10-2018 C3497_13820 198941d3e40dc7f719637a42ddeb4bd6 226 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 207 2.0E-14 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 C3497_14740 abf5e43b295fe465712886274733a984 153 Pfam PF04361 Protein of unknown function (DUF494) 1 150 8.3E-54 T 14-10-2018 IPR007456 Smg C3497_14740 abf5e43b295fe465712886274733a984 153 Hamap MF_00598 Protein Smg [smg]. 1 153 26.166 T 14-10-2018 IPR007456 Smg C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 Pfam PF02119 Flagellar P-ring protein 29 371 4.1E-140 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 Hamap MF_00416 Flagellar P-ring protein [flgI]. 9 372 38.74 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 PRINTS PR01010 Flagellar P-ring protein signature 129 147 2.0E-87 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 PRINTS PR01010 Flagellar P-ring protein signature 195 213 2.0E-87 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 PRINTS PR01010 Flagellar P-ring protein signature 64 79 2.0E-87 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 PRINTS PR01010 Flagellar P-ring protein signature 169 187 2.0E-87 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 PRINTS PR01010 Flagellar P-ring protein signature 29 44 2.0E-87 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 PRINTS PR01010 Flagellar P-ring protein signature 44 59 2.0E-87 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 PRINTS PR01010 Flagellar P-ring protein signature 112 129 2.0E-87 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 PRINTS PR01010 Flagellar P-ring protein signature 90 109 2.0E-87 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_09325 4d0525a3e5d8287c8d3dbb7cd82ad4c9 372 PRINTS PR01010 Flagellar P-ring protein signature 259 271 2.0E-87 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 C3497_00920 8857a044b1e96f81b2290800926bbdd4 109 SUPERFAMILY SSF52833 4 104 7.94E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_00920 8857a044b1e96f81b2290800926bbdd4 109 Gene3D G3DSA:3.40.30.10 4 108 6.7E-31 T 14-10-2018 C3497_07475 553aedce4b360bd07f47a4b6f452b019 234 Gene3D G3DSA:3.30.70.2970 47 149 5.1E-17 T 14-10-2018 C3497_07475 553aedce4b360bd07f47a4b6f452b019 234 Pfam PF04402 Protein of unknown function (DUF541) 35 229 2.7E-25 T 14-10-2018 IPR007497 Protein of unknown function DUF541 C3497_07475 553aedce4b360bd07f47a4b6f452b019 234 Gene3D G3DSA:3.30.110.170 40 227 5.1E-17 T 14-10-2018 C3497_11210 2a8aaf3ee85de9a73bc01747140e1055 468 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 52 462 2.5E-177 T 14-10-2018 IPR021204 Integrating conjugative element protein, PFL4711 C3497_00345 6d8c4d7cb7a808ff6c8dd3316c55978f 192 Pfam PF05137 Fimbrial assembly protein (PilN) 100 177 2.9E-23 T 14-10-2018 IPR007813 Fimbrial assembly PilN C3497_03145 dbd6412a82611fccb2b660dbfc075436 115 Gene3D G3DSA:3.30.70.120 2 100 2.8E-11 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C3497_03145 dbd6412a82611fccb2b660dbfc075436 115 SUPERFAMILY SSF54913 2 101 3.81E-15 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C3497_13450 f3dd2a35fa6bcb42e7ec0292c7f3e2cc 1328 Pfam PF02514 CobN/Magnesium Chelatase 149 1219 0.0 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 C3497_09955 1683287a1e9fef66ecc7283a986061a6 177 Gene3D G3DSA:1.20.120.520 5 176 1.1E-42 T 14-10-2018 C3497_09955 1683287a1e9fef66ecc7283a986061a6 177 Pfam PF01814 Hemerythrin HHE cation binding domain 15 154 1.3E-16 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C3497_12390 62b9ce37b8c88bcbd984f4b84992771c 107 Gene3D G3DSA:3.40.250.10 1 104 5.3E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_12390 62b9ce37b8c88bcbd984f4b84992771c 107 SUPERFAMILY SSF52821 2 105 3.67E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3497_12390 62b9ce37b8c88bcbd984f4b84992771c 107 Pfam PF00581 Rhodanese-like domain 6 98 7.2E-18 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_12390 62b9ce37b8c88bcbd984f4b84992771c 107 SMART SM00450 5 102 1.2E-22 T 14-10-2018 IPR001763 Rhodanese-like domain C3497_08715 fb19bb159351d9b6be6b58f1359ec075 110 PRINTS PR00421 Thioredoxin family signature 32 41 2.7E-5 T 14-10-2018 C3497_08715 fb19bb159351d9b6be6b58f1359ec075 110 PRINTS PR00421 Thioredoxin family signature 24 32 2.7E-5 T 14-10-2018 C3497_08715 fb19bb159351d9b6be6b58f1359ec075 110 PRINTS PR00421 Thioredoxin family signature 71 82 2.7E-5 T 14-10-2018 C3497_08715 fb19bb159351d9b6be6b58f1359ec075 110 Gene3D G3DSA:3.40.30.10 5 109 3.9E-22 T 14-10-2018 C3497_08715 fb19bb159351d9b6be6b58f1359ec075 110 SUPERFAMILY SSF52833 17 103 2.7E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_08715 fb19bb159351d9b6be6b58f1359ec075 110 Pfam PF00085 Thioredoxin 16 103 3.1E-15 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C3497_06135 d304a366d872db500653305fbdc60f4b 154 Pfam PF04319 NifZ domain 3 73 2.1E-31 T 14-10-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 C3497_00445 17e90186f696b4667ca5a21693f8aead 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 308 6.9E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_04110 aca42e906770162c9a3173a51c0917f6 217 SUPERFAMILY SSF110997 146 214 1.96E-17 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3497_04110 aca42e906770162c9a3173a51c0917f6 217 Pfam PF05036 Sporulation related domain 146 214 2.7E-18 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 C3497_04110 aca42e906770162c9a3173a51c0917f6 217 Gene3D G3DSA:3.30.70.1070 149 216 4.8E-13 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3497_04580 2ce06d71dc0dd3ceeeacc10c025eaf8f 197 Pfam PF02417 Chromate transporter 19 182 3.2E-29 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 Gene3D G3DSA:3.50.50.60 117 243 1.2E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 4.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 4.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 4.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 4.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 4.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 4.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 4.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 4.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 4.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 Gene3D G3DSA:3.50.50.60 9 311 1.2E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 SUPERFAMILY SSF51905 1 312 2.29E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 1.2E-119 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 301 1.5E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 4.2E-41 T 14-10-2018 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.2E-41 T 14-10-2018 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 4.2E-41 T 14-10-2018 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 4.2E-41 T 14-10-2018 C3497_11790 6d0fe436fd857a0ef8df935a561dbd90 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.2E-41 T 14-10-2018 C3497_04075 1bf8a09a6662273105c9d26937d62c31 198 Pfam PF02361 Cobalt transport protein 6 146 7.4E-9 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component C3497_01500 2377b6e7fafe03b27e413e7935f9c87c 69 Pfam PF11174 Protein of unknown function (DUF2970) 13 68 1.3E-19 T 14-10-2018 IPR021344 Protein of unknown function DUF2970 C3497_02390 cb819f74a70ae419795c60cd583a74fb 340 Pfam PF04796 Plasmid encoded RepA protein 111 260 3.0E-33 T 14-10-2018 IPR006881 Plasmid encoded RepA protein C3497_07470 750df69455037617a3e9070c0c9060b7 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 45 6.9E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_07470 750df69455037617a3e9070c0c9060b7 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 2.6E-9 T 14-10-2018 IPR001451 Hexapeptide repeat C3497_07470 750df69455037617a3e9070c0c9060b7 179 Gene3D G3DSA:2.160.10.10 1 173 7.3E-63 T 14-10-2018 C3497_07470 750df69455037617a3e9070c0c9060b7 179 SUPERFAMILY SSF51161 2 167 7.9E-49 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3497_00580 bbc673d608c93837bac09dad9faab4e5 253 Pfam PF02361 Cobalt transport protein 14 208 7.8E-18 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component C3497_11860 cf48694694a251ba5bb3ffb5dadf01e3 63 Pfam PF11127 Protein of unknown function (DUF2892) 1 60 1.1E-22 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 C3497_01260 2c83451510f2fc6668ba2e4a8b4cb08a 295 SUPERFAMILY SSF103481 46 145 7.72E-16 T 14-10-2018 C3497_01260 2c83451510f2fc6668ba2e4a8b4cb08a 295 SUPERFAMILY SSF103481 200 292 1.31E-14 T 14-10-2018 C3497_01260 2c83451510f2fc6668ba2e4a8b4cb08a 295 Pfam PF00892 EamA-like transporter family 15 143 1.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_01260 2c83451510f2fc6668ba2e4a8b4cb08a 295 Pfam PF00892 EamA-like transporter family 164 291 2.1E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3497_00945 18a67a252d7680af90706fa85067bf7c 485 Gene3D G3DSA:1.20.1730.10 5 483 6.7E-69 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily C3497_00945 18a67a252d7680af90706fa85067bf7c 485 Pfam PF00474 Sodium:solute symporter family 30 425 1.9E-30 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 C3497_10060 9414e0ad2cd127517cf83b79d62af2e4 564 Pfam PF01740 STAS domain 447 540 4.5E-15 T 14-10-2018 IPR002645 STAS domain C3497_10060 9414e0ad2cd127517cf83b79d62af2e4 564 Gene3D G3DSA:3.30.750.24 439 549 1.6E-25 T 14-10-2018 IPR036513 STAS domain superfamily C3497_10060 9414e0ad2cd127517cf83b79d62af2e4 564 TIGRFAM TIGR00815 sulP: sulfate permease 10 547 2.6E-116 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 C3497_10060 9414e0ad2cd127517cf83b79d62af2e4 564 Pfam PF00916 Sulfate permease family 21 372 4.3E-91 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 C3497_10060 9414e0ad2cd127517cf83b79d62af2e4 564 SUPERFAMILY SSF52091 448 551 1.35E-18 T 14-10-2018 IPR036513 STAS domain superfamily C3497_14330 ee3be20e06e362158bc1ea4e9f79cc35 215 Pfam PF00484 Carbonic anhydrase 38 189 3.0E-51 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 C3497_14330 ee3be20e06e362158bc1ea4e9f79cc35 215 Gene3D G3DSA:3.40.1050.10 1 211 5.7E-83 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 C3497_14330 ee3be20e06e362158bc1ea4e9f79cc35 215 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 43 50 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 C3497_14330 ee3be20e06e362158bc1ea4e9f79cc35 215 SMART SM00947 31 194 3.6E-66 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 C3497_14330 ee3be20e06e362158bc1ea4e9f79cc35 215 SUPERFAMILY SSF53056 3 208 3.14E-73 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 C3497_13105 fc0edd715143c29d9cf23179b90ae1c6 84 Pfam PF03927 NapD protein 1 77 1.3E-16 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly C3497_13105 fc0edd715143c29d9cf23179b90ae1c6 84 Hamap MF_02200 Chaperone NapD [napD]. 1 78 13.652 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly C3497_13105 fc0edd715143c29d9cf23179b90ae1c6 84 Gene3D G3DSA:3.30.70.920 1 71 4.4E-11 T 14-10-2018 C3497_03245 3f79d30e23a199162f2d64f1eba0681b 278 SUPERFAMILY SSF56317 11 274 5.62E-78 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3497_03245 3f79d30e23a199162f2d64f1eba0681b 278 Gene3D G3DSA:3.60.110.10 12 276 3.0E-87 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3497_03245 3f79d30e23a199162f2d64f1eba0681b 278 Pfam PF00795 Carbon-nitrogen hydrolase 14 265 2.1E-50 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C3497_05075 3388443918b4a5fb8a028fc1cd38200c 311 Pfam PF05661 Protein of unknown function (DUF808) 4 296 2.3E-106 T 14-10-2018 IPR008526 Inner membrane protein YedI C3497_05075 3388443918b4a5fb8a028fc1cd38200c 311 PIRSF PIRSF016660 1 307 1.9E-112 T 14-10-2018 IPR008526 Inner membrane protein YedI C3497_11220 b627d4ce958f227a88324e3771a8e71e 507 Pfam PF07916 TraG-like protein, N-terminal region 10 486 7.6E-98 T 14-10-2018 IPR012931 TraG-like, N-terminal C3497_03130 1d010a0638d42c3cc6638735afa18cff 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 7.7E-131 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit C3497_03130 1d010a0638d42c3cc6638735afa18cff 428 PIRSF PIRSF006066 2 428 9.1E-165 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 C3497_03130 1d010a0638d42c3cc6638735afa18cff 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 422 5.5E-155 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 C3497_07940 903714849f287f45c5a0d24eb3413813 325 SUPERFAMILY SSF161098 108 306 6.8E-12 T 14-10-2018 IPR035906 MetI-like superfamily C3497_07940 903714849f287f45c5a0d24eb3413813 325 Gene3D G3DSA:1.10.3720.10 106 319 1.5E-14 T 14-10-2018 IPR035906 MetI-like superfamily C3497_07940 903714849f287f45c5a0d24eb3413813 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 323 3.3E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3497_09980 b61bef8911e6e2ce455b4fca0076a02c 147 Pfam PF00582 Universal stress protein family 1 147 2.8E-30 T 14-10-2018 IPR006016 UspA C3497_09980 b61bef8911e6e2ce455b4fca0076a02c 147 Gene3D G3DSA:3.40.50.620 1 147 3.6E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3497_09980 b61bef8911e6e2ce455b4fca0076a02c 147 SUPERFAMILY SSF52402 1 147 6.95E-35 T 14-10-2018 C3497_09980 b61bef8911e6e2ce455b4fca0076a02c 147 PRINTS PR01438 Universal stress protein signature 2 20 4.0E-15 T 14-10-2018 IPR006015 Universal stress protein A C3497_09980 b61bef8911e6e2ce455b4fca0076a02c 147 PRINTS PR01438 Universal stress protein signature 107 119 4.0E-15 T 14-10-2018 IPR006015 Universal stress protein A C3497_09980 b61bef8911e6e2ce455b4fca0076a02c 147 PRINTS PR01438 Universal stress protein signature 125 147 4.0E-15 T 14-10-2018 IPR006015 Universal stress protein A C3497_06540 68c589e299022c57fdcebee1fe6e7284 212 Pfam PF07603 Protein of unknown function (DUF1566) 62 203 1.8E-25 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 C3497_04725 6c60fdf72843f2aedcd52c0e8ece3ebb 146 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 13 98 1.7E-20 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 C3497_04725 6c60fdf72843f2aedcd52c0e8ece3ebb 146 Pfam PF03334 Na+/H+ antiporter subunit 13 91 2.3E-20 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 C3497_01140 f8af0d9552cf363596120ef1877e8a7b 291 SUPERFAMILY SSF52540 1 153 5.7E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_01140 f8af0d9552cf363596120ef1877e8a7b 291 Pfam PF03668 P-loop ATPase protein family 1 280 1.8E-97 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 C3497_01140 f8af0d9552cf363596120ef1877e8a7b 291 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 280 40.042 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 C3497_01140 f8af0d9552cf363596120ef1877e8a7b 291 PIRSF PIRSF005052 1 283 6.4E-108 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 C3497_12420 2776da29b147399d4aff5e5c365d593a 80 SUPERFAMILY SSF46785 1 73 5.12E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3497_12420 2776da29b147399d4aff5e5c365d593a 80 Gene3D G3DSA:1.10.10.10 1 72 1.9E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3497_12420 2776da29b147399d4aff5e5c365d593a 80 Pfam PF09012 FeoC like transcriptional regulator 2 70 2.0E-21 T 14-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC C3497_09440 9fb44e03d2d75cb528a2d8ccb7b754a8 331 SUPERFAMILY SSF53955 14 327 4.31E-88 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3497_09440 9fb44e03d2d75cb528a2d8ccb7b754a8 331 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 32 325 3.6E-108 T 14-10-2018 IPR011757 Lytic transglycosylase MltB C3497_09440 9fb44e03d2d75cb528a2d8ccb7b754a8 331 Pfam PF13406 Transglycosylase SLT domain 28 323 6.5E-94 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 C3497_09440 9fb44e03d2d75cb528a2d8ccb7b754a8 331 Gene3D G3DSA:1.10.8.350 31 198 2.3E-107 T 14-10-2018 C3497_09440 9fb44e03d2d75cb528a2d8ccb7b754a8 331 Gene3D G3DSA:1.10.530.10 69 324 2.3E-107 T 14-10-2018 C3497_02110 59a95d7c066ded913dfc2dd143f74658 378 Pfam PF08668 HDOD domain 185 293 3.2E-12 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD C3497_02110 59a95d7c066ded913dfc2dd143f74658 378 Gene3D G3DSA:1.10.3210.10 172 366 4.6E-22 T 14-10-2018 C3497_02110 59a95d7c066ded913dfc2dd143f74658 378 SUPERFAMILY SSF109604 172 374 1.38E-31 T 14-10-2018 C3497_00410 940d2154315c8debcfe1d1451ce0f4e9 129 SUPERFAMILY SSF54427 23 104 5.66E-5 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3497_00410 940d2154315c8debcfe1d1451ce0f4e9 129 Gene3D G3DSA:3.10.450.50 3 116 1.3E-5 T 14-10-2018 C3497_00575 4738c920e0a22c84e7000a98780c44ac 202 Gene3D G3DSA:1.10.1760.20 1 197 6.2E-33 T 14-10-2018 C3497_00575 4738c920e0a22c84e7000a98780c44ac 202 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 197 1.0E-42 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 C3497_14370 45433c3c1b7eb560016901a12b2d1644 198 Pfam PF14334 Domain of unknown function (DUF4390) 34 190 5.4E-60 T 14-10-2018 IPR025500 Protein of unknown function DUF4390 C3497_05065 4bb73e9132a8e80e292be4dcee0588ef 312 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 6 305 2.0E-111 T 14-10-2018 IPR010293 Na+-dependent bicarbonate transporter superfamily C3497_09160 bb9ae8ade8b3feb3682317811cc7e60d 136 SUPERFAMILY SSF160214 57 136 1.26E-25 T 14-10-2018 IPR035924 FlaG-like superfamily C3497_09160 bb9ae8ade8b3feb3682317811cc7e60d 136 Gene3D G3DSA:3.30.160.170 34 132 1.1E-18 T 14-10-2018 IPR035924 FlaG-like superfamily C3497_09160 bb9ae8ade8b3feb3682317811cc7e60d 136 Pfam PF03646 FlaG protein 36 133 2.1E-25 T 14-10-2018 IPR005186 FlaG protein C3497_07565 8c21bd90eaf4d6043dc084b5884e23f0 165 Pfam PF04612 Type II secretion system (T2SS), protein M 15 154 2.7E-14 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 C3497_11360 d284c8f00f6c2dca601a9be7d0502852 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 1.5E-46 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3497_11360 d284c8f00f6c2dca601a9be7d0502852 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 1.5E-46 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3497_11360 d284c8f00f6c2dca601a9be7d0502852 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 1.5E-46 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3497_11360 d284c8f00f6c2dca601a9be7d0502852 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 1.5E-46 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3497_11360 d284c8f00f6c2dca601a9be7d0502852 271 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 226 2.8E-69 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3497_11360 d284c8f00f6c2dca601a9be7d0502852 271 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 238 16.677 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3497_11360 d284c8f00f6c2dca601a9be7d0502852 271 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 5.7E-67 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3497_12015 febe8ad8ea9fd0616332a65e0f241edc 338 TIGRFAM TIGR04352 HprK_rel_A: HprK-related kinase A 58 336 4.1E-111 T 14-10-2018 IPR027600 HprK-related kinase A C3497_12015 febe8ad8ea9fd0616332a65e0f241edc 338 SUPERFAMILY SSF53795 152 312 4.58E-15 T 14-10-2018 C3497_12015 febe8ad8ea9fd0616332a65e0f241edc 338 Gene3D G3DSA:3.40.50.300 150 220 5.7E-6 T 14-10-2018 C3497_08410 dee1651ee1ebcf5737685e7aa9c15498 392 Pfam PF05762 VWA domain containing CoxE-like protein 183 272 2.6E-10 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like C3497_13485 86c0b8f2d886c599a6bb2c6df2ea1d33 170 PIRSF PIRSF014995 1 170 1.7E-58 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 C3497_13485 86c0b8f2d886c599a6bb2c6df2ea1d33 170 Pfam PF10029 Predicted periplasmic protein (DUF2271) 22 162 4.1E-45 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 C3497_12580 f5a2ed5d556d3248d08db5e59110308b 325 Pfam PF13280 WYL domain 147 319 2.6E-37 T 14-10-2018 IPR026881 WYL domain C3497_03185 6e5326687a980eb65b6cba3c6d27bfd1 66 Gene3D G3DSA:2.60.260.40 4 57 1.0E-9 T 14-10-2018 C3497_03185 6e5326687a980eb65b6cba3c6d27bfd1 66 Pfam PF10276 Zinc-finger domain 29 55 6.4E-8 T 14-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_01615 71425f8f9c4fe2842844d5aee3527ed3 268 Pfam PF01925 Sulfite exporter TauE/SafE 11 262 5.7E-46 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 C3497_14640 13d81c90b6a3e99bac18d746e069e7ed 70 Pfam PF04359 Protein of unknown function (DUF493) 1 70 3.6E-25 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 C3497_14640 13d81c90b6a3e99bac18d746e069e7ed 70 Gene3D G3DSA:3.30.70.260 1 70 1.3E-22 T 14-10-2018 C3497_14640 13d81c90b6a3e99bac18d746e069e7ed 70 SUPERFAMILY SSF117991 1 70 4.45E-20 T 14-10-2018 IPR027471 YbeD-like domain superfamily C3497_09175 51e4616d5bb2f42eaa8bae2a5f9d4556 107 Gene3D G3DSA:1.20.58.380 5 89 3.0E-7 T 14-10-2018 C3497_09175 51e4616d5bb2f42eaa8bae2a5f9d4556 107 Pfam PF05400 Flagellar protein FliT 17 102 2.0E-11 T 14-10-2018 IPR008622 Flagellar protein FliT C3497_13920 b12576969f249790e8bc15941a92f361 416 Pfam PF00860 Permease family 16 383 5.2E-94 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 C3497_13920 b12576969f249790e8bc15941a92f361 416 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 331 351 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 C3497_13920 b12576969f249790e8bc15941a92f361 416 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 13 407 5.8E-115 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 C3497_07280 84bba00ecbea68e352490c71d390d2c3 71 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 6 68 2.8E-17 T 14-10-2018 IPR018720 Domain of unknown function DUF2249 C3497_07280 84bba00ecbea68e352490c71d390d2c3 71 SUPERFAMILY SSF64307 5 62 1.7E-9 T 14-10-2018 IPR036868 TusA-like domain superfamily C3497_13885 4399802b4fa414942d01fabc0635adea 74 Pfam PF10932 Protein of unknown function (DUF2783) 3 72 3.1E-31 T 14-10-2018 IPR021233 Protein of unknown function DUF2783 C3497_04595 2521e2a3792dc5694c1e3c35e455d008 540 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 246 536 5.3E-125 T 14-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type C3497_04595 2521e2a3792dc5694c1e3c35e455d008 540 Pfam PF02653 Branched-chain amino acid transport system / permease component 247 522 3.8E-48 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_04595 2521e2a3792dc5694c1e3c35e455d008 540 SMART SM00567 E-Z type HEAT repeats 135 164 51.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 C3497_04595 2521e2a3792dc5694c1e3c35e455d008 540 SMART SM00567 E-Z type HEAT repeats 47 76 260.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 C3497_04595 2521e2a3792dc5694c1e3c35e455d008 540 SMART SM00567 E-Z type HEAT repeats 187 216 35.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 C3497_13445 455ea08a7d2f52c75cd5d3ed788590f2 181 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 155 1.2E-6 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C3497_10150 202edf712ad4d4068badd32c460e72b8 197 SUPERFAMILY SSF54523 61 185 7.85E-7 T 14-10-2018 C3497_10150 202edf712ad4d4068badd32c460e72b8 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 59 80 1.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10150 202edf712ad4d4068badd32c460e72b8 197 Pfam PF07963 Prokaryotic N-terminal methylation motif 59 80 7.5E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_10150 202edf712ad4d4068badd32c460e72b8 197 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 59 79 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_11495 6ee26ae2e771a02ca33685e55795c976 194 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 185 7.4E-45 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 C3497_11495 6ee26ae2e771a02ca33685e55795c976 194 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 12 185 2.0E-30 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related C3497_00235 8445e462f0e489d524c64bd001ce9eac 257 Pfam PF02698 DUF218 domain 86 249 1.3E-26 T 14-10-2018 IPR003848 Domain of unknown function DUF218 C3497_01610 848625bbe3ebc99d8dbbbdff7a1e34ae 166 Pfam PF08376 Nitrate and nitrite sensing 59 151 8.2E-17 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein C3497_14325 43ba99bb2857057314bd70032f8f3c43 241 SUPERFAMILY SSF52141 6 239 1.11E-60 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3497_14325 43ba99bb2857057314bd70032f8f3c43 241 Gene3D G3DSA:3.40.470.10 1 240 2.1E-99 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3497_00565 4317505c499badf07809d4c2b398083c 238 Pfam PF10670 Domain of unknown function (DUF4198) 23 204 4.8E-14 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 C3497_12995 6e2a8b527c2698ac9e51a9827bc7058a 882 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 630 857 3.5E-35 T 14-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 C3497_04960 652ede8a64b9c12c6af78cdf0519286e 183 Pfam PF11161 Protein of unknown function (DUF2946) 1 181 2.0E-48 T 14-10-2018 IPR021332 Protein of unknown function DUF2944 C3497_03045 40b0fc04345fe1fd8a0a34cd559aeafc 321 Pfam PF14238 Domain of unknown function (DUF4340) 69 248 6.0E-28 T 14-10-2018 IPR025641 Domain of unknown function DUF4340 C3497_09610 6648fa8935c8b709bf6dc77ab56ff78d 157 SUPERFAMILY SSF109709 74 129 2.09E-8 T 14-10-2018 C3497_09610 6648fa8935c8b709bf6dc77ab56ff78d 157 Gene3D G3DSA:1.10.10.2830 76 137 7.3E-6 T 14-10-2018 C3497_09960 507b65ff00f38cd8c59c77e47d272fe8 131 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 121 2.9E-42 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB C3497_09960 507b65ff00f38cd8c59c77e47d272fe8 131 PIRSF PIRSF005610 1 119 1.4E-26 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB C3497_01120 f18ec9de4f2ebc1029cee1724e7bf5bf 63 Pfam PF06945 Protein of unknown function (DUF1289) 5 52 1.9E-20 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 C3497_11050 b4fb6add1d403b3a8a177b31a75eda1b 201 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 69 170 5.7E-41 T 14-10-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 C3497_06915 ed54998e02f013af4302f0d69f26af84 240 Pfam PF04367 Protein of unknown function (DUF502) 78 179 1.6E-27 T 14-10-2018 IPR007462 Protein of unknown function DUF502 C3497_12990 d613a9f494b180ba104cf5e60f167bd7 383 PRINTS PR00735 Glycosyl hydrolase family 8 signature 277 286 1.7E-7 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C3497_12990 d613a9f494b180ba104cf5e60f167bd7 383 PRINTS PR00735 Glycosyl hydrolase family 8 signature 365 379 1.7E-7 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C3497_12990 d613a9f494b180ba104cf5e60f167bd7 383 PRINTS PR00735 Glycosyl hydrolase family 8 signature 63 76 1.7E-7 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C3497_12990 d613a9f494b180ba104cf5e60f167bd7 383 SUPERFAMILY SSF48208 40 379 4.16E-78 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 C3497_12990 d613a9f494b180ba104cf5e60f167bd7 383 Gene3D G3DSA:1.50.10.10 23 382 1.4E-103 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 C3497_12990 d613a9f494b180ba104cf5e60f167bd7 383 Pfam PF01270 Glycosyl hydrolases family 8 40 111 3.1E-18 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C3497_12990 d613a9f494b180ba104cf5e60f167bd7 383 Pfam PF01270 Glycosyl hydrolases family 8 134 379 1.5E-42 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C3497_06510 2ac5b7efa6c2606d60c5432b062397f7 200 Pfam PF12118 SprA-related family 46 171 3.3E-33 T 14-10-2018 IPR021973 SprA-related family C3497_08105 e87cd75e30c537d04f8ffe9bb7cbf2f4 50 Pfam PF10101 Predicted membrane protein (DUF2339) 5 42 9.4E-12 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane C3497_04575 7d3967f89f5ecbfbb7ab18ccae4a9f7a 183 Pfam PF02417 Chromate transporter 13 178 1.4E-31 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 C3497_03280 e9b1abbab20ed58053c8ded72a566cd0 181 Pfam PF07813 LTXXQ motif family protein 57 149 2.8E-17 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 C3497_09675 2b5a4e496687517c69d5c6bbdf6e6210 97 Pfam PF08681 Protein of unknown function (DUF1778) 14 90 6.4E-24 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 C3497_09675 2b5a4e496687517c69d5c6bbdf6e6210 97 Gene3D G3DSA:1.20.5.780 9 92 9.5E-14 T 14-10-2018 C3497_09675 2b5a4e496687517c69d5c6bbdf6e6210 97 SUPERFAMILY SSF47598 11 88 1.98E-19 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C3497_09065 eefccd4078d1688d3daf0d6ac965d57c 145 Pfam PF09335 SNARE associated Golgi protein 21 139 1.9E-13 T 14-10-2018 IPR032816 SNARE associated Golgi protein C3497_09065 eefccd4078d1688d3daf0d6ac965d57c 145 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 9 133 8.0E-5 T 14-10-2018 IPR020143 Uncharacterised protein family, RP436 C3497_06945 c4136e179a833b4e6d244308b972878d 120 Pfam PF03692 Putative zinc- or iron-chelating domain 16 96 7.1E-8 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein C3497_13490 d1705953d88299bdc8dc9fb7b14e3bdb 226 Pfam PF16357 Putative PepSY_TM-like 27 226 7.1E-74 T 14-10-2018 IPR032307 Putative PepSY TM-like protein C3497_07040 c32de390e3ed23d35bbce8be39ac77c9 64 Pfam PF14070 Putative motility protein 7 62 1.2E-17 T 14-10-2018 IPR025906 Putative motility protein C3497_00250 fef8ea1ac64b7d388c0c3236a3374e88 189 SUPERFAMILY SSF110997 118 183 1.44E-14 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3497_00250 fef8ea1ac64b7d388c0c3236a3374e88 189 Gene3D G3DSA:3.30.70.1070 120 185 1.4E-10 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3497_00250 fef8ea1ac64b7d388c0c3236a3374e88 189 Pfam PF05036 Sporulation related domain 119 183 2.5E-11 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 C3497_12315 cc5d6c13b3d22d3ee7f72af5c254b76f 277 SUPERFAMILY SSF53448 20 276 3.94E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_12315 cc5d6c13b3d22d3ee7f72af5c254b76f 277 Gene3D G3DSA:3.90.550.10 18 255 2.1E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3497_05650 51958542005b7faf6dbb174dd6c33792 415 Pfam PF03060 Nitronate monooxygenase 165 306 2.7E-21 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 C3497_05650 51958542005b7faf6dbb174dd6c33792 415 SUPERFAMILY SSF51412 17 343 2.56E-33 T 14-10-2018 C3497_04115 2a334ffa3ed40cb3a4e9b3100fa3945c 163 Pfam PF02674 Colicin V production protein 4 143 7.0E-35 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 C3497_10170 11669e871b904c7d278c096f6ced1ad4 259 SUPERFAMILY SSF52540 1 256 1.27E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3497_10170 11669e871b904c7d278c096f6ced1ad4 259 Pfam PF13614 AAA domain 5 183 3.6E-41 T 14-10-2018 IPR025669 AAA domain C3497_10170 11669e871b904c7d278c096f6ced1ad4 259 Gene3D G3DSA:3.40.50.300 3 258 2.4E-65 T 14-10-2018 C3497_12205 1a19b40665f2f952f5f6813c7d0fbb8b 197 Gene3D G3DSA:3.40.50.10490 1 195 2.9E-73 T 14-10-2018 C3497_12205 1a19b40665f2f952f5f6813c7d0fbb8b 197 SUPERFAMILY SSF53697 5 190 2.63E-56 T 14-10-2018 C3497_12205 1a19b40665f2f952f5f6813c7d0fbb8b 197 Pfam PF13580 SIS domain 10 146 3.3E-37 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C3497_12205 1a19b40665f2f952f5f6813c7d0fbb8b 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 35.461 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 C3497_09660 61efaaa8e373426dc72ee993bfa7ab13 292 Gene3D G3DSA:3.40.50.720 5 291 8.3E-33 T 14-10-2018 C3497_09660 61efaaa8e373426dc72ee993bfa7ab13 292 Pfam PF01370 NAD dependent epimerase/dehydratase family 87 204 5.8E-10 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C3497_09660 61efaaa8e373426dc72ee993bfa7ab13 292 SUPERFAMILY SSF51735 5 280 2.99E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3497_02740 c70826e4c8dcb8a3097cc0030ba2268d 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 215 3.5E-45 T 14-10-2018 IPR006214 Bax inhibitor 1-related C3497_01475 ff245ca04d0cd87dc54f1dcc021b9d3a 371 Pfam PF02628 Cytochrome oxidase assembly protein 5 319 4.7E-79 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 C3497_00940 d2d106e2bbc06710c88b316baae27de4 337 Pfam PF01136 Peptidase family U32 82 336 8.3E-65 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 C3497_05880 365bca526394df5f705a45ca06567504 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 268 2.3E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_08655 36ed53217efc6d5db849c73a4df588b1 518 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 1.0E-178 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 C3497_08655 36ed53217efc6d5db849c73a4df588b1 518 PIRSF PIRSF006446 357 516 8.7E-37 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 C3497_08655 36ed53217efc6d5db849c73a4df588b1 518 PIRSF PIRSF006446 2 331 1.4E-112 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 C3497_05130 89b789374df1180c075d6ee7f5b49d99 336 PIRSF PIRSF015283 1 333 1.6E-90 T 14-10-2018 IPR016631 Regulatory, RpfE C3497_05130 89b789374df1180c075d6ee7f5b49d99 336 Gene3D G3DSA:3.30.70.2130 87 211 7.7E-8 T 14-10-2018 C3497_01560 4fadb79f849066183583cc22dda92e27 150 Pfam PF08905 Domain of unknown function (DUF1850) 20 109 1.3E-19 T 14-10-2018 IPR015001 Protein of unknown function DUF1850 C3497_07590 1c27f003ef5c80181290632b8ed31f2f 180 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 28 48 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_07590 1c27f003ef5c80181290632b8ed31f2f 180 Gene3D G3DSA:3.55.40.10 59 142 8.8E-9 T 14-10-2018 C3497_07590 1c27f003ef5c80181290632b8ed31f2f 180 Pfam PF07963 Prokaryotic N-terminal methylation motif 27 49 1.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_07590 1c27f003ef5c80181290632b8ed31f2f 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 28 49 2.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3497_07590 1c27f003ef5c80181290632b8ed31f2f 180 SUPERFAMILY SSF54523 30 140 1.33E-8 T 14-10-2018 C3497_03740 f6def1295833de8b6bfa52409588786b 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 104 220 1.6E-27 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C3497_11935 7ac3f6dee57176069886fbe9d2cf6f3c 409 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 48 381 8.6E-70 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX C3497_00090 5092912201c7e863ca0c3063de5789e9 291 Pfam PF03547 Membrane transport protein 8 134 1.6E-7 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 C3497_00090 5092912201c7e863ca0c3063de5789e9 291 Pfam PF03547 Membrane transport protein 151 284 2.2E-12 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 C3497_06575 5f056b2f5c1218a98a578d2d3fdabca1 370 Pfam PF02405 Permease MlaE 153 361 4.0E-64 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 C3497_09845 e7f03277aa43958cdd4bcbb07e540d5c 272 Pfam PF13479 AAA domain 17 243 2.4E-45 T 14-10-2018 C3497_13440 1b0be880bf63781c7128ae52ac1fe504 106 Pfam PF09919 Uncharacterized conserved protein (DUF2149) 17 103 3.1E-28 T 14-10-2018 IPR018676 Protein of unknown function DUF2149 C3497_11190 0c0d0f94a4a66515dd261c7779612345 247 Gene3D G3DSA:3.40.30.10 54 223 1.2E-32 T 14-10-2018 C3497_11190 0c0d0f94a4a66515dd261c7779612345 247 Pfam PF13462 Thioredoxin 55 197 1.2E-15 T 14-10-2018 IPR012336 Thioredoxin-like fold C3497_11190 0c0d0f94a4a66515dd261c7779612345 247 SUPERFAMILY SSF52833 50 219 4.99E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_13510 98e0e9bd4b25d666b736ef8b46542da7 428 SUPERFAMILY SSF111369 62 305 2.75E-25 T 14-10-2018 C3497_13510 98e0e9bd4b25d666b736ef8b46542da7 428 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 328 3.0E-46 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3497_13510 98e0e9bd4b25d666b736ef8b46542da7 428 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 305 3.5E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3497_12020 2889689cffc593774164ebbe607d96ca 359 Pfam PF14907 Uncharacterised nucleotidyltransferase 30 284 1.9E-48 T 14-10-2018 IPR039498 Uncharacterised nucleotidyltransferase C3497_12010 b38697b94af200cc3b22e1a80df1cfda 108 TIGRFAM TIGR04353 PqqD_rel_X: PqqD family protein, HPr-rel-A system 39 108 7.2E-13 T 14-10-2018 IPR027599 PqqD family protein, HPr-rel-A system C3497_09665 d0f445a9fd16f9fc40bad058fd2137ca 359 Pfam PF00953 Glycosyl transferase family 4 79 235 7.7E-28 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 C3497_13365 888eddbb5f5362b88007e08dd6f37b4a 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 103 4.0E-22 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD C3497_03405 e20348b18854b97cd37cfbb6420c1230 430 Pfam PF11902 Protein of unknown function (DUF3422) 6 421 8.1E-162 T 14-10-2018 IPR021830 Protein of unknown function DUF3422 C3497_06545 256b3c6ae118ddfadc4205ea7f7697ac 146 Pfam PF10116 Protein required for attachment to host cells 5 140 2.0E-39 T 14-10-2018 IPR019291 Host attachment protein C3497_10265 3bdac0e346eface9d63f2c162192721e 276 Pfam PF01578 Cytochrome C assembly protein 49 271 2.2E-30 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 C3497_07005 a595be02eccd09ca00a660e099c3b28a 168 Pfam PF13511 Domain of unknown function (DUF4124) 17 70 2.4E-12 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 C3497_04370 7feac24dfa7c8aaf459cce580e8d50c8 374 Pfam PF01609 Transposase DDE domain 106 341 3.4E-19 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3497_04370 7feac24dfa7c8aaf459cce580e8d50c8 374 Pfam PF13808 DDE_Tnp_1-associated 11 97 9.0E-32 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C3497_03530 469dcb6a2377ef6925522402967d33fe 688 Pfam PF05140 ResB-like family 16 663 1.6E-139 T 14-10-2018 IPR007816 ResB-like domain C3497_05100 f84a9b371fd59623c8d03816c2d0890f 420 Pfam PF09664 Protein of unknown function C-terminus (DUF2399) 279 417 5.1E-7 T 14-10-2018 IPR024465 Domain of unknown function DUF2399 C3497_05100 f84a9b371fd59623c8d03816c2d0890f 420 SUPERFAMILY SSF56726 280 413 2.35E-5 T 14-10-2018 IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily GO:0000737|GO:0003677|GO:0005694 Reactome: R-HSA-912446 C3497_08740 7d48fa37fbaa41c080472da19b366a26 377 Pfam PF12698 ABC-2 family transporter protein 28 366 7.5E-37 T 14-10-2018 C3497_09940 f071839ff7ec8dbc6794b6121dbdf335 233 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 210 6.4E-57 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain C3497_14005 652d1a76fba0f367c013bf7521b3a05f 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 14 295 1.8E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_04710 2a76f51cc286fab99d76ab99debe6459 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 3.2E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04710 2a76f51cc286fab99d76ab99debe6459 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 3.2E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04710 2a76f51cc286fab99d76ab99debe6459 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 3.2E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04710 2a76f51cc286fab99d76ab99debe6459 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 3.2E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04710 2a76f51cc286fab99d76ab99debe6459 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 3.2E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_04710 2a76f51cc286fab99d76ab99debe6459 498 Pfam PF00361 Proton-conducting membrane transporter 128 418 3.0E-58 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3497_06435 10f5526372a1c9311bad12b937471071 107 Pfam PF04102 SlyX 56 107 8.0E-13 T 14-10-2018 IPR007236 SlyX C3497_13540 55e9a844249db2a7d55661d332035b02 74 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 48 1.1E-8 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain C3497_13540 55e9a844249db2a7d55661d332035b02 74 Gene3D G3DSA:1.10.10.1100 1 56 1.9E-20 T 14-10-2018 C3497_10875 b5127042cce9415d03af31eda4b0c196 182 Pfam PF11358 Protein of unknown function (DUF3158) 15 167 2.6E-71 T 14-10-2018 IPR021502 Protein of unknown function DUF3158 C3497_10915 14fd3c76e843263dff911c98a8fd4fd8 121 Pfam PF11284 Protein of unknown function (DUF3085) 22 112 7.7E-34 T 14-10-2018 IPR021436 Protein of unknown function DUF3085 C3497_04600 53b19180f43913a4cf3e0695257654f4 398 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 45 358 3.0E-134 T 14-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC C3497_04600 53b19180f43913a4cf3e0695257654f4 398 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 347 2.6E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_06120 cd22d2a788945e215c6815ac0c9af28f 105 SUPERFAMILY SSF46626 31 93 2.81E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_06120 cd22d2a788945e215c6815ac0c9af28f 105 Pfam PF00034 Cytochrome c 32 83 3.7E-4 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3497_06120 cd22d2a788945e215c6815ac0c9af28f 105 Gene3D G3DSA:1.10.760.10 27 98 1.8E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C3497_03140 45bb826eff58b3e2644fd9250096ba00 504 Pfam PF07556 Protein of unknown function (DUF1538) 21 230 5.6E-65 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 C3497_03140 45bb826eff58b3e2644fd9250096ba00 504 Pfam PF07556 Protein of unknown function (DUF1538) 282 492 6.9E-68 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 C3497_06525 ee52ceb4185e5a744031d21310331761 424 Pfam PF02308 MgtC family 16 133 4.4E-21 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 C3497_06525 ee52ceb4185e5a744031d21310331761 424 Pfam PF13194 Domain of unknown function (DUF4010) 182 391 9.3E-55 T 14-10-2018 IPR025105 Domain of unknown function DUF4010 C3497_06940 b2e7313b85c7dadb4bf7efa9d1ea52f3 119 Pfam PF03692 Putative zinc- or iron-chelating domain 6 98 5.9E-10 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein C3497_13480 d4080fdb85ce847a321b97be3934038e 266 Pfam PF10670 Domain of unknown function (DUF4198) 20 242 1.3E-52 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 C3497_02190 40794ebc2fb7d437ae773d89802a804d 166 Gene3D G3DSA:3.40.50.2020 4 162 7.1E-40 T 14-10-2018 C3497_02190 40794ebc2fb7d437ae773d89802a804d 166 Pfam PF00156 Phosphoribosyl transferase domain 8 130 1.8E-18 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3497_02190 40794ebc2fb7d437ae773d89802a804d 166 SUPERFAMILY SSF53271 8 146 4.06E-34 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3497_01490 93022e84c637eebea96ff02096af5338 63 Pfam PF11137 Protein of unknown function (DUF2909) 1 59 2.5E-19 T 14-10-2018 IPR021313 Protein of unknown function DUF2909 C3497_11175 1652bdbd6487cbc71125492f95cc218f 478 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 468 1.1E-184 T 14-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 C3497_12895 78a0b7cb079fbcc1523943f3cdbb22bf 325 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 23 297 1.1E-12 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD C3497_06425 3c3d354332657bbd9f14bef46e92e4a2 115 Pfam PF05717 IS66 Orf2 like protein 9 104 2.0E-31 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C3497_07720 7d15ab7f9059acaa6f7d4170aa0462f6 550 Pfam PF03961 Flagellar Assembly Protein A 90 532 3.6E-106 T 14-10-2018 IPR005646 Flagellar assembly protein A C3497_03220 b40f240f606983d828bc46016254a8cc 184 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 18 170 2.9E-40 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 C3497_01280 7c1226bb3e46368478eb91e428976dc2 459 Pfam PF07793 Protein of unknown function (DUF1631) 71 209 7.5E-20 T 14-10-2018 IPR012434 Protein of unknown function DUF1631 C3497_01280 7c1226bb3e46368478eb91e428976dc2 459 Pfam PF07793 Protein of unknown function (DUF1631) 211 458 9.2E-26 T 14-10-2018 IPR012434 Protein of unknown function DUF1631 C3497_13975 176a5b750d48357d72f4729551b60883 156 Pfam PF05232 Chlorhexidine efflux transporter 9 72 1.3E-18 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter C3497_13975 176a5b750d48357d72f4729551b60883 156 Pfam PF05232 Chlorhexidine efflux transporter 81 143 1.5E-21 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter C3497_01480 eff3a849df031d7e1540b1d4405ce00d 197 SUPERFAMILY SSF52833 50 191 8.85E-11 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3497_04045 3af9c92383514144c6e80cb2276598a1 273 Pfam PF01435 Peptidase family M48 76 257 8.6E-33 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3497_14165 bd8db6928edfa3daf96fbadf92ad1ee8 84 Pfam PF04380 Membrane fusogenic activity 1 75 2.5E-27 T 14-10-2018 IPR007475 Membrane fusogenic activity C3497_11445 9b53f5ffecfd5b1bf9aa8a31339ca6ce 291 PRINTS PR00164 ABC-2 type transport system membrane protein signature 211 230 4.9E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3497_11445 9b53f5ffecfd5b1bf9aa8a31339ca6ce 291 PRINTS PR00164 ABC-2 type transport system membrane protein signature 231 250 4.9E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3497_11445 9b53f5ffecfd5b1bf9aa8a31339ca6ce 291 PRINTS PR00164 ABC-2 type transport system membrane protein signature 93 115 4.9E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3497_11445 9b53f5ffecfd5b1bf9aa8a31339ca6ce 291 PIRSF PIRSF006648 30 288 3.2E-20 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3497_11445 9b53f5ffecfd5b1bf9aa8a31339ca6ce 291 Pfam PF01061 ABC-2 type transporter 44 254 1.4E-34 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 C3497_10855 3c4451e0cd99304436689dd24aa60942 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 4.4E-62 T 14-10-2018 IPR021364 Protein of unknown function DUF2857 C3497_08530 a0f714ca71cdb49425acc42380000748 131 Pfam PF04343 Protein of unknown function, DUF488 13 127 7.4E-22 T 14-10-2018 IPR007438 Protein of unknown function DUF488 C3497_10295 f4b9a3dadab475d20c9d0833c6819c69 208 Pfam PF04367 Protein of unknown function (DUF502) 56 161 7.7E-35 T 14-10-2018 IPR007462 Protein of unknown function DUF502 C3497_01365 80583a2d7ba0940b56c48aa83fcd269b 275 Pfam PF07589 PEP-CTERM motif 250 274 3.2E-6 T 14-10-2018 IPR013424 PEP-CTERM protein-sorting domain C3497_01365 80583a2d7ba0940b56c48aa83fcd269b 275 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 251 274 1.9E-5 T 14-10-2018 IPR013424 PEP-CTERM protein-sorting domain C3497_10545 53d58cb413d981d9987518a0a9085c67 176 Pfam PF16036 Chalcone isomerase-like 64 172 3.1E-8 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 C3497_09545 da463831d0e79678e6bdbaeb450718c6 99 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 84 2.9E-18 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 C3497_10950 ff1bd5894d98c814f01d740d85dea34a 84 Pfam PF11666 Protein of unknown function (DUF2933) 27 74 7.1E-22 T 14-10-2018 IPR021682 Protein of unknown function DUF2933 C3497_09220 971114f9e625554e76750efad817f5c4 214 Pfam PF08856 Protein of unknown function (DUF1826) 21 211 3.4E-56 T 14-10-2018 IPR014955 Protein of unknown function DUF1826 C3497_09270 62b49a2c91bba4cfeebfb39812849be6 188 Pfam PF03748 Flagellar basal body-associated protein FliL 80 188 7.2E-24 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 C3497_08225 9ad414e5298dd3a59c6c12adcec85b46 403 TIGRFAM TIGR01898 cas_TM1791_cmr6: CRISPR type III-B/RAMP module RAMP protein Cmr6 87 274 2.6E-25 T 14-10-2018 IPR010172 CRISPR-associated protein, TM1791 C3497_08225 9ad414e5298dd3a59c6c12adcec85b46 403 Pfam PF03787 RAMP superfamily 87 136 2.1E-5 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein C3497_05530 8b78b15115abc2a65f441374d068bb16 118 Pfam PF16137 Domain of unknown function (DUF4845) 29 112 2.5E-27 T 14-10-2018 IPR032314 Protein of unknown function DUF4845 C3497_12285 204b7a5554e3c7cb7801db5e2743eaec 144 Pfam PF05433 Glycine zipper 2TM domain 52 92 6.1E-8 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 C3497_02695 d752908805387c3b83a402f468125891 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 288 2.4E-54 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 C3497_09800 c57b62ea80cfddf0c55bc3dcc8f19dcc 150 Pfam PF11149 Protein of unknown function (DUF2924) 10 143 3.1E-49 T 14-10-2018 IPR021322 Protein of unknown function DUF2924 C3497_02930 286c37c6832a26a43bdd486e4e63cc66 295 Pfam PF02535 ZIP Zinc transporter 143 290 1.5E-20 T 14-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 C3497_01600 a96765be4800dd349a62a32312f5892c 119 Pfam PF05717 IS66 Orf2 like protein 9 107 3.0E-37 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C3497_10320 c22d3579fbecc92f6c4ecfd5b121cfb8 73 Pfam PF14375 Cysteine-rich CWC 10 55 2.9E-8 T 14-10-2018 IPR032720 Cysteine-rich CWC C3497_11180 14c209185b4e031160d658f2bb66232e 144 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 140 4.9E-54 T 14-10-2018 IPR022262 Lipoprotein, putative C3497_05170 d93a9429ed9f99270aea9b7f92aa286f 388 Pfam PF11062 Protein of unknown function (DUF2863) 5 384 1.2E-162 T 14-10-2018 IPR021292 Protein of unknown function DUF2863 C3497_08695 511dca71ae896189606369985d178bdc 236 Pfam PF11306 Protein of unknown function (DUF3108) 23 215 3.1E-30 T 14-10-2018 IPR021457 Protein of unknown function DUF3108 C3497_00325 ba596215a0748d6c3c772a36c7c869b9 48 Pfam PF13627 Prokaryotic lipoprotein-attachment site 7 28 2.9E-8 T 14-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site C3497_04780 eb46f369d048ca7dcf9867054ed6fca7 88 Pfam PF00916 Sulfate permease family 27 70 1.4E-11 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 C3497_02040 c1fce233d81bf6f2e27eaf464fa073ca 636 Pfam PF13910 Domain of unknown function (DUF4209) 510 600 2.4E-17 T 14-10-2018 IPR025209 Domain of unknown function DUF4209