locus-tag class description LB319_00015 PF03060 Nitronate monooxygenase LB319_00065 PF12706 Beta-lactamase superfamily domain LB319_00065 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LB319_00065 PF17770 Ribonuclease J C-terminal domain LB319_00070 PF03309 Type III pantothenate kinase LB319_00075 PF02237 Biotin protein ligase C terminal domain LB319_00075 PF03099 Biotin/lipoate A/B protein ligase family LB319_00075 PF03309 Type III pantothenate kinase LB319_00085 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LB319_00085 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LB319_00090 PF02445 Quinolinate synthetase A protein LB319_00100 PF00462 Glutaredoxin LB319_00125 PF08264 Anticodon-binding domain of tRNA LB319_00125 PF00133 tRNA synthetases class I (I, L, M and V) LB319_00125 PF10458 Valyl tRNA synthetase tRNA binding arm LB319_00130 PF00490 Delta-aminolevulinic acid dehydratase LB319_00145 PF05145 Transition state regulatory protein AbrB LB319_00150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LB319_00155 PF02677 Epoxyqueuosine reductase QueH LB319_00160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LB319_00165 PF05145 Transition state regulatory protein AbrB LB319_00170 PF00857 Isochorismatase family LB319_00185 PF05193 Peptidase M16 inactive domain LB319_00185 PF00675 Insulinase (Peptidase family M16) LB319_00190 PF00291 Pyridoxal-phosphate dependent enzyme LB319_00190 PF14821 Threonine synthase N terminus LB319_00200 PF00294 pfkB family carbohydrate kinase LB319_00205 PF07549 SecD/SecF GG Motif LB319_00205 PF02355 Protein export membrane protein LB319_00210 PF07549 SecD/SecF GG Motif LB319_00210 PF02355 Protein export membrane protein LB319_00215 PF02699 Preprotein translocase subunit LB319_00225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LB319_00225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LB319_00230 PF02504 Fatty acid synthesis protein LB319_00235 PF01783 Ribosomal L32p protein family LB319_00250 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LB319_00250 PF03900 Porphobilinogen deaminase, C-terminal domain LB319_00255 PF00814 Glycoprotease family LB319_00260 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LB319_00260 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LB319_00265 PF00707 Translation initiation factor IF-3, C-terminal domain LB319_00265 PF05198 Translation initiation factor IF-3, N-terminal domain LB319_00270 PF05190 MutS family domain IV LB319_00270 PF05192 MutS domain III LB319_00270 PF00488 MutS domain V LB319_00270 PF01624 MutS domain I LB319_00270 PF05188 MutS domain II LB319_00285 PF01386 Ribosomal L25p family LB319_00285 PF14693 Ribosomal protein TL5, C-terminal domain LB319_00290 PF01195 Peptidyl-tRNA hydrolase LB319_00295 PF01926 50S ribosome-binding GTPase LB319_00295 PF06071 Protein of unknown function (DUF933) LB319_00300 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LB319_00300 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LB319_00305 PF02899 Phage integrase, N-terminal SAM-like domain LB319_00305 PF00589 Phage integrase family LB319_00310 PF13649 Methyltransferase domain LB319_00320 PF00155 Aminotransferase class I and II LB319_00325 PF00202 Aminotransferase class-III LB319_00340 PF00270 DEAD/DEAH box helicase LB319_00340 PF17764 3′ DNA-binding domain (3′BD) LB319_00340 PF18074 Primosomal protein N C-terminal domain LB319_00340 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LB319_00345 PF05159 Capsule polysaccharide biosynthesis protein LB319_00350 PF00884 Sulfatase LB319_00360 PF01136 Peptidase family U32 LB319_00365 PF01343 Peptidase family S49 LB319_00370 PF00166 Chaperonin 10 Kd subunit LB319_00375 PF00118 TCP-1/cpn60 chaperonin family LB319_00385 PF06250 YhcG PDDEXK nuclease domain LB319_00385 PF17761 DUF1016 N-terminal domain LB319_00390 PF04002 RadC-like JAB domain LB319_00465 PF00155 Aminotransferase class I and II LB319_00465 PF00392 Bacterial regulatory proteins, gntR family LB319_00470 PF02567 Phenazine biosynthesis-like protein LB319_00480 PF01042 Endoribonuclease L-PSP LB319_00485 PF04073 Aminoacyl-tRNA editing domain LB319_00490 PF02525 Flavodoxin-like fold LB319_00495 PF00155 Aminotransferase class I and II LB319_00510 PF03737 Aldolase/RraA LB319_00515 PF02548 Ketopantoate hydroxymethyltransferase LB319_00535 PF03949 Malic enzyme, NAD binding domain LB319_00535 PF00390 Malic enzyme, N-terminal domain LB319_00540 PF02463 RecF/RecN/SMC N terminal domain LB319_00545 PF13439 Glycosyltransferase Family 4 LB319_00545 PF00534 Glycosyl transferases group 1 LB319_00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_00570 PF00512 His Kinase A (phospho-acceptor) domain LB319_00570 PF00989 PAS fold LB319_00570 PF16736 Single Cache-like LB319_00575 PF00285 Citrate synthase, C-terminal domain LB319_00580 PF00749 tRNA synthetases class I (E and Q), catalytic domain LB319_00585 PF00753 Metallo-beta-lactamase superfamily LB319_00585 PF03772 Competence protein LB319_00605 PF02548 Ketopantoate hydroxymethyltransferase LB319_00610 PF02569 Pantoate-beta-alanine ligase LB319_00615 PF01810 LysE type translocator LB319_00620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_00620 PF03466 LysR substrate binding domain LB319_00625 PF02423 Ornithine cyclodeaminase/mu-crystallin family LB319_00635 PF07690 Major Facilitator Superfamily LB319_00640 PF17762 HTH domain found in ParB protein LB319_00640 PF02195 ParB-like nuclease domain LB319_00645 PF13614 AAA domain LB319_00650 PF02527 rRNA small subunit methyltransferase G LB319_00655 PF13932 GidA associated domain LB319_00655 PF01134 Glucose inhibited division protein A LB319_00660 PF08450 SMP-30/Gluconolactonase/LRE-like region LB319_00665 PF00248 Aldo/keto reductase family LB319_00675 PF00593 TonB dependent receptor LB319_00675 PF07715 TonB-dependent Receptor Plug Domain LB319_00680 PF01926 50S ribosome-binding GTPase LB319_00680 PF12631 MnmE helical domain LB319_00680 PF10396 GTP-binding protein TrmE N-terminus LB319_00685 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LB319_00685 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LB319_00690 PF01738 Dienelactone hydrolase family LB319_00695 PF00107 Zinc-binding dehydrogenase LB319_00695 PF08240 Alcohol dehydrogenase GroES-like domain LB319_00700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LB319_00700 PF07498 Rho termination factor, N-terminal domain LB319_00700 PF07497 Rho termination factor, RNA-binding domain LB319_00710 PF01208 Uroporphyrinogen decarboxylase (URO-D) LB319_00715 PF00593 TonB dependent receptor LB319_00715 PF07715 TonB-dependent Receptor Plug Domain LB319_00720 PF00155 Aminotransferase class I and II LB319_00730 PF00009 Elongation factor Tu GTP binding domain LB319_00735 PF01507 Phosphoadenosine phosphosulfate reductase family LB319_00740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LB319_00740 PF10414 Sirohaem synthase dimerisation region LB319_00745 PF01507 Phosphoadenosine phosphosulfate reductase family LB319_00750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LB319_00750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LB319_00755 PF00175 Oxidoreductase NAD-binding domain LB319_00755 PF00258 Flavodoxin LB319_00755 PF00667 FAD binding domain LB319_00770 PF06969 HemN C-terminal domain LB319_00770 PF04055 Radical SAM superfamily LB319_00775 PF01725 Ham1 family LB319_00780 PF01138 3' exoribonuclease family, domain 1 LB319_00780 PF03725 3' exoribonuclease family, domain 2 LB319_00785 PF01628 HrcA protein C terminal domain LB319_00790 PF01025 GrpE LB319_00795 PF01029 NusB family LB319_00795 PF01189 16S rRNA methyltransferase RsmB/F LB319_00800 PF00834 Ribulose-phosphate 3 epimerase family LB319_00815 PF02589 LUD domain LB319_00815 PF13183 4Fe-4S dicluster domain LB319_00815 PF11870 Domain of unknown function (DUF3390) LB319_00820 PF02754 Cysteine-rich domain LB319_00840 PF02142 MGS-like domain LB319_00840 PF01808 AICARFT/IMPCHase bienzyme LB319_00845 PF04471 Restriction endonuclease LB319_00845 PF14338 Mrr N-terminal domain LB319_00855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LB319_00865 PF03692 Putative zinc- or iron-chelating domain LB319_00880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LB319_00885 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LB319_00885 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LB319_00890 PF00929 Exonuclease LB319_00895 PF01121 Dephospho-CoA kinase LB319_00900 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LB319_00900 PF01488 Shikimate / quinate 5-dehydrogenase LB319_00900 PF08501 Shikimate dehydrogenase substrate binding domain LB319_00905 PF02545 Maf-like protein LB319_00915 PF01810 LysE type translocator LB319_00920 PF03466 LysR substrate binding domain LB319_00920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_00925 PF07690 Major Facilitator Superfamily LB319_00930 PF00561 alpha/beta hydrolase fold LB319_00935 PF01047 MarR family LB319_00940 PF01925 Sulfite exporter TauE/SafE LB319_00945 PF01380 SIS domain LB319_00955 PF02595 Glycerate kinase family LB319_00970 PF00248 Aldo/keto reductase family LB319_00990 PF13417 Glutathione S-transferase, N-terminal domain LB319_00990 PF04399 Glutaredoxin 2, C terminal domain LB319_00995 PF07995 Glucose / Sorbosone dehydrogenase LB319_01000 PF00571 CBS domain LB319_01000 PF03471 Transporter associated domain LB319_01005 PF02130 Uncharacterized protein family UPF0054 LB319_01010 PF02562 PhoH-like protein LB319_01015 PF00919 Uncharacterized protein family UPF0004 LB319_01015 PF01938 TRAM domain LB319_01015 PF04055 Radical SAM superfamily LB319_01020 PF01584 CheW-like domain LB319_01025 PF00072 Response regulator receiver domain LB319_01030 PF03975 CheD chemotactic sensory transduction LB319_01035 PF00072 Response regulator receiver domain LB319_01035 PF01339 CheB methylesterase LB319_01040 PF03705 CheR methyltransferase, all-alpha domain LB319_01040 PF01739 CheR methyltransferase, SAM binding domain LB319_01045 PF01584 CheW-like domain LB319_01045 PF02895 Signal transducing histidine kinase, homodimeric domain LB319_01045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_01045 PF01627 Hpt domain LB319_01055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB319_01055 PF00672 HAMP domain LB319_01055 PF02203 Tar ligand binding domain homologue LB319_01060 PF02824 TGS domain LB319_01060 PF04607 Region found in RelA / SpoT proteins LB319_01060 PF13291 ACT domain LB319_01080 PF00106 short chain dehydrogenase LB319_01090 PF04055 Radical SAM superfamily LB319_01090 PF06968 Biotin and Thiamin Synthesis associated domain LB319_01100 PF01066 CDP-alcohol phosphatidyltransferase LB319_01125 PF11954 Domain of unknown function (DUF3471) LB319_01125 PF00144 Beta-lactamase LB319_01130 PF00330 Aconitase family (aconitate hydratase) LB319_01135 PF00694 Aconitase C-terminal domain LB319_01145 PF00893 Small Multidrug Resistance protein LB319_01160 PF00005 ABC transporter LB319_01160 PF16326 ABC transporter C-terminal domain LB319_01170 PF04715 Anthranilate synthase component I, N terminal region LB319_01170 PF00425 chorismate binding enzyme LB319_01175 PF00591 Glycosyl transferase family, a/b domain LB319_01175 PF02885 Glycosyl transferase family, helical bundle domain LB319_01175 PF00117 Glutamine amidotransferase class-I LB319_01180 PF01063 Amino-transferase class IV LB319_01185 PF02082 Transcriptional regulator LB319_01190 PF03063 Prismane/CO dehydrogenase family LB319_01195 PF06965 Na+/H+ antiporter 1 LB319_01205 PF00004 ATPase family associated with various cellular activities (AAA) LB319_01205 PF16193 AAA C-terminal domain LB319_01205 PF12002 MgsA AAA+ ATPase C terminal LB319_01220 PF04073 Aminoacyl-tRNA editing domain LB319_01240 PF01569 PAP2 superfamily LB319_01295 PF01451 Low molecular weight phosphotyrosine protein phosphatase LB319_01300 PF01168 Alanine racemase, N-terminal domain LB319_01305 PF00005 ABC transporter LB319_01310 PF02910 Fumarate reductase flavoprotein C-term LB319_01310 PF00890 FAD binding domain LB319_01325 PF02390 Putative methyltransferase LB319_01335 PF02887 Pyruvate kinase, alpha/beta domain LB319_01335 PF00224 Pyruvate kinase, barrel domain LB319_01340 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) LB319_01345 PF01709 Transcriptional regulator LB319_01350 PF02075 Crossover junction endodeoxyribonuclease RuvC LB319_01355 PF07499 RuvA, C-terminal domain LB319_01355 PF01330 RuvA N terminal domain LB319_01365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LB319_01365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LB319_01370 PF17864 RuvB AAA lid domain LB319_01370 PF05491 RuvB C-terminal winged helix domain LB319_01370 PF05496 Holliday junction DNA helicase RuvB P-loop domain LB319_01375 PF03061 Thioesterase superfamily LB319_01380 PF01618 MotA/TolQ/ExbB proton channel family LB319_01385 PF02472 Biopolymer transport protein ExbD/TolR LB319_01395 PF04052 TolB amino-terminal domain LB319_01395 PF07676 WD40-like Beta Propeller Repeat LB319_01400 PF00691 OmpA family LB319_01420 PF09278 MerR, DNA binding LB319_01420 PF00376 MerR family regulatory protein LB319_01440 PF13667 ThiC-associated domain LB319_01440 PF01964 Radical SAM ThiC family LB319_01460 PF00456 Transketolase, thiamine diphosphate binding domain LB319_01460 PF02779 Transketolase, pyrimidine binding domain LB319_01460 PF02780 Transketolase, C-terminal domain LB319_01465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LB319_01465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LB319_01470 PF00162 Phosphoglycerate kinase LB319_01480 PF01791 DeoC/LacD family aldolase LB319_01485 PF04551 GcpE protein LB319_01490 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LB319_01490 PF05221 S-adenosyl-L-homocysteine hydrolase LB319_01495 PF12848 ABC transporter LB319_01495 PF00005 ABC transporter LB319_01505 PF01406 tRNA synthetases class I (C) catalytic domain LB319_01510 PF01474 Class-II DAHP synthetase family LB319_01520 PF07660 Secretin and TonB N terminus short domain LB319_01520 PF07715 TonB-dependent Receptor Plug Domain LB319_01520 PF00593 TonB dependent receptor LB319_01525 PF03313 Serine dehydratase alpha chain LB319_01525 PF03315 Serine dehydratase beta chain LB319_01545 PF10150 Ribonuclease E/G family LB319_01545 PF00575 S1 RNA binding domain LB319_01545 PF12111 Polyribonucleotide phosphorylase C terminal LB319_01550 PF01520 N-acetylmuramoyl-L-alanine amidase LB319_01555 PF17092 Penicillin-binding protein OB-like domain LB319_01555 PF00912 Transglycosylase LB319_01555 PF00905 Penicillin binding protein transpeptidase domain LB319_01560 PF03462 PCRF domain LB319_01560 PF00472 RF-1 domain LB319_01565 PF01726 LexA DNA binding domain LB319_01565 PF00717 Peptidase S24-like LB319_01570 PF00591 Glycosyl transferase family, a/b domain LB319_01570 PF02885 Glycosyl transferase family, helical bundle domain LB319_01575 PF00117 Glutamine amidotransferase class-I LB319_01580 PF00672 HAMP domain LB319_01580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB319_01580 PF02203 Tar ligand binding domain homologue LB319_01585 PF13411 MerR HTH family regulatory protein LB319_01600 PF00696 Amino acid kinase family LB319_01600 PF01472 PUA domain LB319_01605 PF01018 GTP1/OBG LB319_01605 PF01926 50S ribosome-binding GTPase LB319_01615 PF01016 Ribosomal L27 protein LB319_01620 PF00829 Ribosomal prokaryotic L21 protein LB319_01625 PF03797 Autotransporter beta-domain LB319_01625 PF12951 Passenger-associated-transport-repeat LB319_01625 PF00082 Subtilase family LB319_01630 PF01554 MatE LB319_01640 PF01551 Peptidase family M23 LB319_01640 PF04225 Opacity-associated protein A LysM-like domain LB319_01645 PF00271 Helicase conserved C-terminal domain LB319_01645 PF08148 DSHCT (NUC185) domain LB319_01645 PF00270 DEAD/DEAH box helicase LB319_01650 PF00037 4Fe-4S binding domain LB319_01650 PF11953 Domain of unknown function (DUF3470) LB319_01655 PF02559 CarD-like/TRCF domain LB319_01670 PF00561 alpha/beta hydrolase fold LB319_01670 PF07021 Methionine biosynthesis protein MetW LB319_01675 PF00561 alpha/beta hydrolase fold LB319_01680 PF00106 short chain dehydrogenase LB319_01685 PF01367 5'-3' exonuclease, C-terminal SAM fold LB319_01685 PF00476 DNA polymerase family A LB319_01685 PF01612 3'-5' exonuclease LB319_01685 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LB319_01695 PF01032 FecCD transport family LB319_01700 PF00005 ABC transporter LB319_01710 PF00588 SpoU rRNA Methylase family LB319_01710 PF08032 RNA 2'-O ribose methyltransferase substrate binding LB319_01725 PF13180 PDZ domain LB319_01730 PF10609 NUBPL iron-transfer P-loop NTPase LB319_01735 PF00213 ATP synthase delta (OSCP) subunit LB319_01740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LB319_01740 PF00306 ATP synthase alpha/beta chain, C terminal domain LB319_01740 PF02874 ATP synthase alpha/beta family, beta-barrel domain LB319_01745 PF00231 ATP synthase LB319_01750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LB319_01750 PF02874 ATP synthase alpha/beta family, beta-barrel domain LB319_01755 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LB319_01765 PF00216 Bacterial DNA-binding protein LB319_01770 PF00227 Proteasome subunit LB319_01775 PF07724 AAA domain (Cdc48 subfamily) LB319_01775 PF00004 ATPase family associated with various cellular activities (AAA) LB319_01780 PF00471 Ribosomal protein L33 LB319_01785 PF00072 Response regulator receiver domain LB319_01805 PF00005 ABC transporter LB319_01805 PF00664 ABC transporter transmembrane region LB319_01805 PF03412 Peptidase C39 family LB319_01810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LB319_01810 PF00529 HlyD membrane-fusion protein of T1SS LB319_01815 PF09330 D-lactate dehydrogenase, membrane binding LB319_01815 PF01565 FAD binding domain LB319_01820 PF00072 Response regulator receiver domain LB319_01820 PF00486 Transcriptional regulatory protein, C terminal LB319_01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_01830 PF00005 ABC transporter LB319_01835 PF03379 CcmB protein LB319_01885 PF00795 Carbon-nitrogen hydrolase LB319_01890 PF02773 S-adenosylmethionine synthetase, C-terminal domain LB319_01890 PF02772 S-adenosylmethionine synthetase, central domain LB319_01890 PF00438 S-adenosylmethionine synthetase, N-terminal domain LB319_01895 PF04552 Sigma-54, DNA binding domain LB319_01895 PF04963 Sigma-54 factor, core binding domain LB319_01895 PF00309 Sigma-54 factor, Activator interacting domain (AID) LB319_01900 PF00005 ABC transporter LB319_01925 PF00313 'Cold-shock' DNA-binding domain LB319_01935 PF00529 HlyD membrane-fusion protein of T1SS LB319_01935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LB319_01940 PF00873 AcrB/AcrD/AcrF family LB319_01945 PF02321 Outer membrane efflux protein LB319_01950 PF04402 Protein of unknown function (DUF541) LB319_01955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LB319_01960 PF04286 Protein of unknown function (DUF445) LB319_01965 PF01790 Prolipoprotein diacylglyceryl transferase LB319_01970 PF00083 Sugar (and other) transporter LB319_01975 PF00830 Ribosomal L28 family LB319_01980 PF14437 MafB19-like deaminase LB319_01985 PF03471 Transporter associated domain LB319_01985 PF03741 Integral membrane protein TerC family LB319_01995 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LB319_01995 PF02843 Phosphoribosylglycinamide synthetase, C domain LB319_01995 PF02844 Phosphoribosylglycinamide synthetase, N domain LB319_02000 PF02601 Exonuclease VII, large subunit LB319_02000 PF13742 OB-fold nucleic acid binding domain LB319_02015 PF00762 Ferrochelatase LB319_02030 PF05159 Capsule polysaccharide biosynthesis protein LB319_02045 PF07687 Peptidase dimerisation domain LB319_02045 PF01546 Peptidase family M20/M25/M40 LB319_02055 PF13091 PLD-like domain LB319_02055 PF13396 Phospholipase_D-nuclease N-terminal LB319_02080 PF00186 Dihydrofolate reductase LB319_02085 PF06574 FAD synthetase LB319_02085 PF01687 Riboflavin kinase LB319_02090 PF00133 tRNA synthetases class I (I, L, M and V) LB319_02090 PF08264 Anticodon-binding domain of tRNA LB319_02095 PF01252 Signal peptidase (SPase) II LB319_02105 PF14489 QueF-like protein LB319_02115 PF01053 Cys/Met metabolism PLP-dependent enzyme LB319_02120 PF09285 Elongation factor P, C-terminal LB319_02120 PF08207 Elongation factor P (EF-P) KOW-like domain LB319_02120 PF01132 Elongation factor P (EF-P) OB domain LB319_02125 PF00459 Inositol monophosphatase family LB319_02130 PF05951 Bacterial protein of unknown function (DUF882) LB319_02135 PF02581 Thiamine monophosphate synthase LB319_02140 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LB319_02150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LB319_02150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LB319_02150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LB319_02150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LB319_02160 PF00155 Aminotransferase class I and II LB319_02170 PF01523 Putative modulator of DNA gyrase LB319_02180 PF00909 Ammonium Transporter Family LB319_02185 PF17209 Hfq protein LB319_02190 PF16360 GTP-binding GTPase Middle Region LB319_02190 PF13167 GTP-binding GTPase N-terminal LB319_02190 PF01926 50S ribosome-binding GTPase LB319_02195 PF02622 Uncharacterized ACR, COG1678 LB319_02205 PF13195 Protein of unknown function (DUF4011) LB319_02205 PF13087 AAA domain LB319_02205 PF13086 AAA domain LB319_02205 PF13087 AAA domain LB319_02205 PF13195 Protein of unknown function (DUF4011) LB319_02205 PF13086 AAA domain LB319_02215 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LB319_02220 PF01119 DNA mismatch repair protein, C-terminal domain LB319_02220 PF08676 MutL C terminal dimerisation domain LB319_02230 PF04085 rod shape-determining protein MreC LB319_02240 PF00905 Penicillin binding protein transpeptidase domain LB319_02240 PF03717 Penicillin-binding Protein dimerisation domain LB319_02245 PF01098 Cell cycle protein LB319_02255 PF02151 UvrB/uvrC motif LB319_02255 PF17757 UvrB interaction domain LB319_02255 PF00271 Helicase conserved C-terminal domain LB319_02255 PF04851 Type III restriction enzyme, res subunit LB319_02255 PF12344 Ultra-violet resistance protein B LB319_02260 PF01702 Queuine tRNA-ribosyltransferase LB319_02265 PF12826 Helix-hairpin-helix motif LB319_02265 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LB319_02265 PF03120 NAD-dependent DNA ligase OB-fold domain LB319_02265 PF01653 NAD-dependent DNA ligase adenylation domain LB319_02265 PF00533 BRCA1 C Terminus (BRCT) domain LB319_02270 PF00083 Sugar (and other) transporter LB319_02275 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LB319_02275 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LB319_02280 PF00920 Dehydratase family LB319_02285 PF02685 Glucokinase LB319_02290 PF01177 Asp/Glu/Hydantoin racemase LB319_02295 PF01037 Lrp/AsnC ligand binding domain LB319_02305 PF02435 Levansucrase/Invertase LB319_02310 PF02435 Levansucrase/Invertase LB319_02320 PF02190 ATP-dependent protease La (LON) substrate-binding domain LB319_02320 PF05362 Lon protease (S16) C-terminal proteolytic domain LB319_02320 PF00004 ATPase family associated with various cellular activities (AAA) LB319_02425 PF08448 PAS fold LB319_02425 PF00990 Diguanylate cyclase, GGDEF domain LB319_02425 PF00563 EAL domain LB319_02425 PF08447 PAS fold LB319_02430 PF01728 FtsJ-like methyltransferase LB319_02435 PF02541 Ppx/GppA phosphatase family LB319_02445 PF00004 ATPase family associated with various cellular activities (AAA) LB319_02445 PF02861 Clp amino terminal domain, pathogenicity island component LB319_02445 PF10431 C-terminal, D2-small domain, of ClpB protein LB319_02445 PF17871 AAA lid domain LB319_02445 PF07724 AAA domain (Cdc48 subfamily) LB319_02450 PF01061 ABC-2 type transporter LB319_02460 PF00202 Aminotransferase class-III LB319_02465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LB319_02465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LB319_02470 PF01430 Hsp33 protein LB319_02475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_02475 PF00986 DNA gyrase B subunit, carboxyl terminus LB319_02475 PF00204 DNA gyrase B LB319_02475 PF01751 Toprim domain LB319_02480 PF01914 MarC family integral membrane protein LB319_02485 PF02325 YGGT family LB319_02495 PF00005 ABC transporter LB319_02510 PF01553 Acyltransferase LB319_02515 PF02153 Prephenate dehydrogenase LB319_02520 PF00155 Aminotransferase class I and II LB319_02525 PF02082 Transcriptional regulator LB319_02530 PF01458 Uncharacterized protein family (UPF0051) LB319_02535 PF00005 ABC transporter LB319_02540 PF01458 Uncharacterized protein family (UPF0051) LB319_02545 PF00266 Aminotransferase class-V LB319_02550 PF01883 Iron-sulfur cluster assembly protein LB319_02555 PF01521 Iron-sulphur cluster biosynthesis LB319_02565 PF00132 Bacterial transferase hexapeptide (six repeats) LB319_02565 PF14602 Hexapeptide repeat of succinyl-transferase LB319_02565 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LB319_02575 PF00625 Guanylate kinase LB319_02595 PF01479 S4 domain LB319_02595 PF00849 RNA pseudouridylate synthase LB319_02610 PF13419 Haloacid dehalogenase-like hydrolase LB319_02615 PF00268 Ribonucleotide reductase, small chain LB319_02630 PF03062 MBOAT, membrane-bound O-acyltransferase family LB319_02660 PF01926 50S ribosome-binding GTPase LB319_02660 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LB319_02665 PF01268 Formate--tetrahydrofolate ligase LB319_02670 PF00111 2Fe-2S iron-sulfur cluster binding domain LB319_02670 PF00175 Oxidoreductase NAD-binding domain LB319_02675 PF01037 Lrp/AsnC ligand binding domain LB319_02680 PF00005 ABC transporter LB319_02685 PF12704 MacB-like periplasmic core domain LB319_02685 PF02687 FtsX-like permease family LB319_02690 PF03129 Anticodon binding domain LB319_02690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LB319_02695 PF06418 CTP synthase N-terminus LB319_02695 PF00117 Glutamine amidotransferase class-I LB319_02705 PF00121 Triosephosphate isomerase LB319_02715 PF04715 Anthranilate synthase component I, N terminal region LB319_02715 PF00425 chorismate binding enzyme LB319_02725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_02725 PF03466 LysR substrate binding domain LB319_02735 PF00885 6,7-dimethyl-8-ribityllumazine synthase LB319_02740 PF00925 GTP cyclohydrolase II LB319_02740 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LB319_02745 PF00677 Lumazine binding domain LB319_02750 PF01872 RibD C-terminal domain LB319_02750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LB319_02760 PF00072 Response regulator receiver domain LB319_02760 PF00486 Transcriptional regulatory protein, C terminal LB319_02770 PF00512 His Kinase A (phospho-acceptor) domain LB319_02770 PF16736 Single Cache-like LB319_02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_02770 PF00989 PAS fold LB319_02780 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LB319_02785 PF01842 ACT domain LB319_02785 PF00742 Homoserine dehydrogenase LB319_02785 PF03447 Homoserine dehydrogenase, NAD binding domain LB319_02790 PF02308 MgtC family LB319_02795 PF02770 Acyl-CoA dehydrogenase, middle domain LB319_02795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LB319_02795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LB319_02805 PF03328 HpcH/HpaI aldolase/citrate lyase family LB319_02820 PF00326 Prolyl oligopeptidase family LB319_02820 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LB319_02825 PF01321 Creatinase/Prolidase N-terminal domain LB319_02825 PF00557 Metallopeptidase family M24 LB319_02830 PF00543 Nitrogen regulatory protein P-II LB319_02835 PF00120 Glutamine synthetase, catalytic domain LB319_02835 PF03951 Glutamine synthetase, beta-Grasp domain LB319_02840 PF07690 Major Facilitator Superfamily LB319_02850 PF01103 Surface antigen LB319_02850 PF07244 Surface antigen variable number repeat LB319_02850 PF17243 POTRA domain TamA domain 1 LB319_02855 PF13419 Haloacid dehalogenase-like hydrolase LB319_02860 PF00132 Bacterial transferase hexapeptide (six repeats) LB319_02860 PF12804 MobA-like NTP transferase domain LB319_02865 PF00905 Penicillin binding protein transpeptidase domain LB319_02865 PF00912 Transglycosylase LB319_02885 PF00535 Glycosyl transferase family 2 LB319_02890 PF00849 RNA pseudouridylate synthase LB319_02895 PF00472 RF-1 domain LB319_02900 PF13185 GAF domain LB319_02915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LB319_02915 PF00364 Biotin-requiring enzyme LB319_02915 PF02817 e3 binding domain LB319_02920 PF03061 Thioesterase superfamily LB319_02925 PF07992 Pyridine nucleotide-disulphide oxidoreductase LB319_02925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LB319_02930 PF01569 PAP2 superfamily LB319_02935 PF00164 Ribosomal protein S12/S23 LB319_02940 PF00177 Ribosomal protein S7p/S5e LB319_02945 PF00679 Elongation factor G C-terminus LB319_02945 PF14492 Elongation Factor G, domain II LB319_02945 PF03764 Elongation factor G, domain IV LB319_02945 PF00009 Elongation factor Tu GTP binding domain LB319_02945 PF03144 Elongation factor Tu domain 2 LB319_02950 PF00009 Elongation factor Tu GTP binding domain LB319_02950 PF03144 Elongation factor Tu domain 2 LB319_02950 PF03143 Elongation factor Tu C-terminal domain LB319_02955 PF00338 Ribosomal protein S10p/S20e LB319_02960 PF00297 Ribosomal protein L3 LB319_02965 PF00573 Ribosomal protein L4/L1 family LB319_02970 PF00276 Ribosomal protein L23 LB319_02975 PF00181 Ribosomal Proteins L2, RNA binding domain LB319_02975 PF03947 Ribosomal Proteins L2, C-terminal domain LB319_02980 PF00203 Ribosomal protein S19 LB319_02985 PF00237 Ribosomal protein L22p/L17e LB319_02990 PF07650 KH domain LB319_02990 PF00189 Ribosomal protein S3, C-terminal domain LB319_02995 PF00252 Ribosomal protein L16p/L10e LB319_03000 PF00831 Ribosomal L29 protein LB319_03005 PF00366 Ribosomal protein S17 LB319_03010 PF00238 Ribosomal protein L14p/L23e LB319_03015 PF00467 KOW motif LB319_03015 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LB319_03020 PF00673 ribosomal L5P family C-terminus LB319_03020 PF00281 Ribosomal protein L5 LB319_03025 PF00253 Ribosomal protein S14p/S29e LB319_03030 PF00410 Ribosomal protein S8 LB319_03035 PF00347 Ribosomal protein L6 LB319_03040 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LB319_03045 PF00333 Ribosomal protein S5, N-terminal domain LB319_03045 PF03719 Ribosomal protein S5, C-terminal domain LB319_03050 PF00327 Ribosomal protein L30p/L7e LB319_03055 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LB319_03060 PF00344 SecY translocase LB319_03065 PF05191 Adenylate kinase, active site lid LB319_03070 PF00416 Ribosomal protein S13/S18 LB319_03075 PF00411 Ribosomal protein S11 LB319_03080 PF01000 RNA polymerase Rpb3/RpoA insert domain LB319_03080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LB319_03080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LB319_03085 PF01196 Ribosomal protein L17 LB319_03095 PF00694 Aconitase C-terminal domain LB319_03095 PF00330 Aconitase family (aconitate hydratase) LB319_03100 PF00180 Isocitrate/isopropylmalate dehydrogenase LB319_03105 PF00218 Indole-3-glycerol phosphate synthase LB319_03110 PF00916 Sulfate permease family LB319_03110 PF01740 STAS domain LB319_03120 PF00654 Voltage gated chloride channel LB319_03125 PF12282 Signal transduction histidine kinase LB319_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_03125 PF07568 Histidine kinase LB319_03130 PF00013 KH domain LB319_03130 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LB319_03130 PF01138 3' exoribonuclease family, domain 1 LB319_03130 PF03725 3' exoribonuclease family, domain 2 LB319_03130 PF00575 S1 RNA binding domain LB319_03135 PF00312 Ribosomal protein S15 LB319_03140 PF16198 tRNA pseudouridylate synthase B C-terminal domain LB319_03140 PF01509 TruB family pseudouridylate synthase (N terminal domain) LB319_03145 PF00265 Thymidine kinase LB319_03150 PF02033 Ribosome-binding factor A LB319_03155 PF00009 Elongation factor Tu GTP binding domain LB319_03155 PF11987 Translation-initiation factor 2 LB319_03155 PF08364 Bacterial translation initiation factor IF-2 associated region LB319_03155 PF04760 Translation initiation factor IF-2, N-terminal region LB319_03165 PF13184 NusA-like KH domain LB319_03165 PF08529 NusA N-terminal domain LB319_03165 PF00575 S1 RNA binding domain LB319_03170 PF02576 RimP N-terminal domain LB319_03170 PF17384 RimP C-terminal SH3 domain LB319_03175 PF07995 Glucose / Sorbosone dehydrogenase LB319_03185 PF00155 Aminotransferase class I and II LB319_03190 PF00593 TonB dependent receptor LB319_03190 PF07715 TonB-dependent Receptor Plug Domain LB319_03195 PF00155 Aminotransferase class I and II LB319_03200 PF02153 Prephenate dehydrogenase LB319_03200 PF01817 Chorismate mutase type II LB319_03205 PF00348 Polyprenyl synthetase LB319_03210 PF00270 DEAD/DEAH box helicase LB319_03210 PF04408 Helicase associated domain (HA2) LB319_03210 PF00271 Helicase conserved C-terminal domain LB319_03210 PF08482 ATP-dependent helicase C-terminal LB319_03215 PF07690 Major Facilitator Superfamily LB319_03220 PF02629 CoA binding domain LB319_03220 PF00549 CoA-ligase LB319_03245 PF00528 Binding-protein-dependent transport system inner membrane component LB319_03250 PF00005 ABC transporter LB319_03255 PF04399 Glutaredoxin 2, C terminal domain LB319_03255 PF13417 Glutathione S-transferase, N-terminal domain LB319_03260 PF13361 UvrD-like helicase C-terminal domain LB319_03260 PF00580 UvrD/REP helicase N-terminal domain LB319_03270 PF00849 RNA pseudouridylate synthase LB319_03270 PF01479 S4 domain LB319_03275 PF00375 Sodium:dicarboxylate symporter family LB319_03280 PF07690 Major Facilitator Superfamily LB319_03285 PF02875 Mur ligase family, glutamate ligase domain LB319_03285 PF08245 Mur ligase middle domain LB319_03290 PF01039 Carboxyl transferase domain LB319_03290 PF17848 Acetyl-coA carboxylase zinc finger domain LB319_03295 PF00290 Tryptophan synthase alpha chain LB319_03300 PF00291 Pyridoxal-phosphate dependent enzyme LB319_03305 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LB319_03310 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LB319_03320 PF06745 KaiC LB319_03320 PF18073 Rubredoxin metal binding domain LB319_03325 PF02674 Colicin V production protein LB319_03340 PF01761 3-dehydroquinate synthase LB319_03345 PF01202 Shikimate kinase LB319_03360 PF00589 Phage integrase family LB319_03360 PF02899 Phage integrase, N-terminal SAM-like domain LB319_03365 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LB319_03370 PF13188 PAS domain LB319_03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_03370 PF00072 Response regulator receiver domain LB319_03370 PF08448 PAS fold LB319_03370 PF00512 His Kinase A (phospho-acceptor) domain LB319_03375 PF13677 Membrane MotB of proton-channel complex MotA/MotB LB319_03375 PF00691 OmpA family LB319_03380 PF01618 MotA/TolQ/ExbB proton channel family LB319_03400 PF02119 Flagellar P-ring protein LB319_03405 PF02107 Flagellar L-ring protein LB319_03410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LB319_03410 PF00460 Flagella basal body rod protein LB319_03415 PF00460 Flagella basal body rod protein LB319_03415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LB319_03420 PF07559 Flagellar basal body protein FlaE LB319_03420 PF07196 Flagellin hook IN motif LB319_03420 PF00460 Flagella basal body rod protein LB319_03420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LB319_03425 PF03963 Flagellar hook capping protein - N-terminal region LB319_03425 PF13860 FlgD Ig-like domain LB319_03425 PF13861 FlgD Tudor-like domain LB319_03430 PF00460 Flagella basal body rod protein LB319_03430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LB319_03440 PF01618 MotA/TolQ/ExbB proton channel family LB319_03465 PF00771 FHIPEP family LB319_03470 PF10609 NUBPL iron-transfer P-loop NTPase LB319_03475 PF04542 Sigma-70 region 2 LB319_03475 PF04539 Sigma-70 region 3 LB319_03475 PF04545 Sigma-70, region 4 LB319_03490 PF00669 Bacterial flagellin N-terminal helical region LB319_03490 PF00669 Bacterial flagellin N-terminal helical region LB319_03490 PF00700 Bacterial flagellin C-terminal helical region LB319_03490 PF00700 Bacterial flagellin C-terminal helical region LB319_03495 PF02954 Bacterial regulatory protein, Fis family LB319_03495 PF00072 Response regulator receiver domain LB319_03495 PF00158 Sigma-54 interaction domain LB319_03500 PF02049 Flagellar hook-basal body complex protein FliE LB319_03505 PF01514 Secretory protein of YscJ/FliF family LB319_03505 PF08345 Flagellar M-ring protein C-terminal LB319_03510 PF01706 FliG C-terminal domain LB319_03510 PF14841 FliG middle domain LB319_03510 PF14842 FliG N-terminal domain LB319_03520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LB319_03520 PF18269 T3SS EscN ATPase C-terminal domain LB319_03545 PF02154 Flagellar motor switch protein FliM LB319_03545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LB319_03550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LB319_03560 PF00813 FliP family LB319_03565 PF01313 Bacterial export proteins, family 3 LB319_03570 PF01311 Bacterial export proteins, family 1 LB319_03575 PF01312 FlhB HrpN YscU SpaS Family LB319_03580 PF07195 Flagellar hook-associated protein 2 C-terminus LB319_03580 PF02465 Flagellar hook-associated protein 2 N-terminus LB319_03590 PF01594 AI-2E family transporter LB319_03595 PF01522 Polysaccharide deacetylase LB319_03605 PF00156 Phosphoribosyl transferase domain LB319_03610 PF04958 Arginine N-succinyltransferase beta subunit LB319_03615 PF01546 Peptidase family M20/M25/M40 LB319_03615 PF07687 Peptidase dimerisation domain LB319_03625 PF00012 Hsp70 protein LB319_03630 PF00226 DnaJ domain LB319_03630 PF01556 DnaJ C terminal domain LB319_03630 PF00684 DnaJ central domain LB319_03635 PF10397 Adenylosuccinate lyase C-terminus LB319_03635 PF00206 Lyase LB319_03640 PF04002 RadC-like JAB domain LB319_03660 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter LB319_03665 PF00119 ATP synthase A chain LB319_03675 PF00430 ATP synthase B/B' CF(0) LB319_03680 PF00430 ATP synthase B/B' CF(0) LB319_03685 PF01541 GIY-YIG catalytic domain LB319_03685 PF02151 UvrB/uvrC motif LB319_03685 PF08459 UvrC Helix-hairpin-helix N-terminal LB319_03685 PF12826 Helix-hairpin-helix motif LB319_03690 PF02565 Recombination protein O C terminal LB319_03690 PF11967 Recombination protein O N terminal LB319_03700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_03700 PF03466 LysR substrate binding domain LB319_03705 PF01053 Cys/Met metabolism PLP-dependent enzyme LB319_03710 PF00180 Isocitrate/isopropylmalate dehydrogenase LB319_03720 PF01867 CRISPR associated protein Cas1 LB319_03725 PF18019 HD domain LB319_03730 PF09611 CRISPR-associated protein (Cas_Csy1) LB319_03735 PF09614 CRISPR-associated protein (Cas_Csy2) LB319_03740 PF09615 CRISPR-associated protein (Cas_Csy3) LB319_03755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LB319_03755 PF00205 Thiamine pyrophosphate enzyme, central domain LB319_03755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LB319_03760 PF03547 Membrane transport protein LB319_03765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LB319_03765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LB319_03770 PF01134 Glucose inhibited division protein A LB319_03775 PF03989 DNA gyrase C-terminal domain, beta-propeller LB319_03775 PF00521 DNA gyrase/topoisomerase IV, subunit A LB319_03780 PF02566 OsmC-like protein LB319_03805 PF00893 Small Multidrug Resistance protein LB319_03820 PF00326 Prolyl oligopeptidase family LB319_03825 PF00501 AMP-binding enzyme LB319_03835 PF10576 Iron-sulfur binding domain of endonuclease III LB319_03835 PF00730 HhH-GPD superfamily base excision DNA repair protein LB319_03835 PF00633 Helix-hairpin-helix motif LB319_03840 PF01113 Dihydrodipicolinate reductase, N-terminus LB319_03840 PF05173 Dihydrodipicolinate reductase, C-terminus LB319_03845 PF00551 Formyl transferase LB319_03850 PF00586 AIR synthase related protein, N-terminal domain LB319_03850 PF02769 AIR synthase related protein, C-terminal domain LB319_03865 PF02503 Polyphosphate kinase middle domain LB319_03865 PF13090 Polyphosphate kinase C-terminal domain 2 LB319_03865 PF17941 Polyphosphate kinase C-terminal domain 1 LB319_03865 PF13089 Polyphosphate kinase N-terminal domain LB319_03870 PF02541 Ppx/GppA phosphatase family LB319_03875 PF01612 3'-5' exonuclease LB319_03875 PF00570 HRDC domain LB319_03880 PF00152 tRNA synthetases class II (D, K and N) LB319_03880 PF01336 OB-fold nucleic acid binding domain LB319_03880 PF02938 GAD domain LB319_03885 PF03976 Polyphosphate kinase 2 (PPK2) LB319_03890 PF03449 Transcription elongation factor, N-terminal LB319_03890 PF01272 Transcription elongation factor, GreA/GreB, C-term LB319_03895 PF01464 Transglycosylase SLT domain LB319_03900 PF00701 Dihydrodipicolinate synthetase family LB319_03905 PF01668 SmpB protein LB319_03910 PF01431 Peptidase family M13 LB319_03910 PF05649 Peptidase family M13 LB319_03920 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LB319_03925 PF00467 KOW motif LB319_03925 PF02357 Transcription termination factor nusG LB319_03930 PF03946 Ribosomal protein L11, N-terminal domain LB319_03930 PF00298 Ribosomal protein L11, RNA binding domain LB319_03935 PF00687 Ribosomal protein L1p/L10e family LB319_03940 PF00466 Ribosomal protein L10 LB319_03945 PF00542 Ribosomal protein L7/L12 C-terminal domain LB319_03945 PF16320 Ribosomal protein L7/L12 dimerisation domain LB319_03955 PF04563 RNA polymerase beta subunit LB319_03955 PF04561 RNA polymerase Rpb2, domain 2 LB319_03955 PF04565 RNA polymerase Rpb2, domain 3 LB319_03955 PF10385 RNA polymerase beta subunit external 1 domain LB319_03955 PF00562 RNA polymerase Rpb2, domain 6 LB319_03955 PF04560 RNA polymerase Rpb2, domain 7 LB319_03960 PF04983 RNA polymerase Rpb1, domain 3 LB319_03960 PF00623 RNA polymerase Rpb1, domain 2 LB319_03960 PF04997 RNA polymerase Rpb1, domain 1 LB319_03960 PF04998 RNA polymerase Rpb1, domain 5 LB319_03960 PF05000 RNA polymerase Rpb1, domain 4 LB319_03965 PF13673 Acetyltransferase (GNAT) domain LB319_03980 PF00289 Biotin carboxylase, N-terminal domain LB319_03980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LB319_03980 PF02785 Biotin carboxylase C-terminal domain LB319_03985 PF00364 Biotin-requiring enzyme LB319_03990 PF01220 Dehydroquinase class II LB319_04000 PF05690 Thiazole biosynthesis protein ThiG LB319_04005 PF03992 Antibiotic biosynthesis monooxygenase LB319_04015 PF00009 Elongation factor Tu GTP binding domain LB319_04015 PF03144 Elongation factor Tu domain 2 LB319_04015 PF16658 Class II release factor RF3, C-terminal domain LB319_04045 PF00291 Pyridoxal-phosphate dependent enzyme LB319_04050 PF04542 Sigma-70 region 2 LB319_04050 PF04545 Sigma-70, region 4 LB319_04050 PF00140 Sigma-70 factor, region 1.2 LB319_04055 PF00849 RNA pseudouridylate synthase LB319_04065 PF10090 Histidine phosphotransferase C-terminal domain LB319_04070 PF00462 Glutaredoxin LB319_04095 PF16123 Hydroxyacylglutathione hydrolase C-terminus LB319_04095 PF00753 Metallo-beta-lactamase superfamily LB319_04100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LB319_04115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LB319_04115 PF03129 Anticodon binding domain LB319_04115 PF02824 TGS domain LB319_04115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LB319_04120 PF08335 GlnD PII-uridylyltransferase LB319_04120 PF01966 HD domain LB319_04140 PF03448 MgtE intracellular N domain LB319_04140 PF00571 CBS domain LB319_04140 PF01769 Divalent cation transporter LB319_04145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LB319_04150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_04150 PF03466 LysR substrate binding domain LB319_04155 PF01795 MraW methylase family LB319_04160 PF00753 Metallo-beta-lactamase superfamily LB319_04165 PF00873 AcrB/AcrD/AcrF family LB319_04175 PF02321 Outer membrane efflux protein LB319_04180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_04180 PF03466 LysR substrate binding domain LB319_04185 PF02934 GatB/GatE catalytic domain LB319_04185 PF02637 GatB domain LB319_04190 PF01425 Amidase LB319_04195 PF02686 Glu-tRNAGln amidotransferase C subunit LB319_04200 PF03652 Holliday junction resolvase LB319_04205 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase LB319_04210 PF05199 GMC oxidoreductase LB319_04210 PF00732 GMC oxidoreductase LB319_04215 PF00034 Cytochrome c LB319_04215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LB319_04230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LB319_04230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LB319_04235 PF01979 Amidohydrolase family LB319_04245 PF00326 Prolyl oligopeptidase family LB319_04245 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LB319_04255 PF00106 short chain dehydrogenase LB319_04260 PF02321 Outer membrane efflux protein LB319_04270 PF00005 ABC transporter LB319_04285 PF01118 Semialdehyde dehydrogenase, NAD binding domain LB319_04295 PF00883 Cytosol aminopeptidase family, catalytic domain LB319_04295 PF02789 Cytosol aminopeptidase family, N-terminal domain LB319_04300 PF18693 TRAM domain LB319_04300 PF00919 Uncharacterized protein family UPF0004 LB319_04300 PF04055 Radical SAM superfamily LB319_04305 PF02594 Uncharacterised ACR, YggU family COG1872 LB319_04310 PF01416 tRNA pseudouridine synthase LB319_04315 PF02911 Formyl transferase, C-terminal domain LB319_04315 PF00551 Formyl transferase LB319_04320 PF13662 Toprim domain LB319_04320 PF02132 RecR protein LB319_04325 PF01327 Polypeptide deformylase LB319_04330 PF02646 RmuC family LB319_04345 PF01242 6-pyruvoyl tetrahydropterin synthase LB319_04350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LB319_04350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LB319_04350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LB319_04355 PF00586 AIR synthase related protein, N-terminal domain LB319_04355 PF02769 AIR synthase related protein, C-terminal domain LB319_04355 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LB319_04360 PF00291 Pyridoxal-phosphate dependent enzyme LB319_04370 PF01795 MraW methylase family LB319_04380 PF03717 Penicillin-binding Protein dimerisation domain LB319_04380 PF00905 Penicillin binding protein transpeptidase domain LB319_04385 PF01225 Mur ligase family, catalytic domain LB319_04385 PF08245 Mur ligase middle domain LB319_04385 PF02875 Mur ligase family, glutamate ligase domain LB319_04390 PF01225 Mur ligase family, catalytic domain LB319_04390 PF02875 Mur ligase family, glutamate ligase domain LB319_04390 PF08245 Mur ligase middle domain LB319_04395 PF00953 Glycosyl transferase family 4 LB319_04395 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LB319_04400 PF08245 Mur ligase middle domain LB319_04405 PF01098 Cell cycle protein LB319_04410 PF04101 Glycosyltransferase family 28 C-terminal domain LB319_04410 PF03033 Glycosyltransferase family 28 N-terminal domain LB319_04415 PF08245 Mur ligase middle domain LB319_04415 PF01225 Mur ligase family, catalytic domain LB319_04415 PF02875 Mur ligase family, glutamate ligase domain LB319_04420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LB319_04420 PF01565 FAD binding domain LB319_04425 PF01820 D-ala D-ala ligase N-terminus LB319_04425 PF07478 D-ala D-ala ligase C-terminus LB319_04430 PF08478 POTRA domain, FtsQ-type LB319_04430 PF03799 Cell division protein FtsQ LB319_04435 PF02491 SHS2 domain inserted in FTSA LB319_04440 PF00091 Tubulin/FtsZ family, GTPase domain LB319_04440 PF12327 FtsZ family, C-terminal domain LB319_04450 PF00654 Voltage gated chloride channel LB319_04455 PF13286 Phosphohydrolase-associated domain LB319_04455 PF01966 HD domain LB319_04460 PF00750 tRNA synthetases class I (R) LB319_04460 PF05746 DALR anticodon binding domain LB319_04460 PF00133 tRNA synthetases class I (I, L, M and V) LB319_04460 PF03485 Arginyl tRNA synthetase N terminal domain LB319_04470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LB319_04470 PF01411 tRNA synthetases class II (A) LB319_04470 PF02272 DHHA1 domain LB319_04475 PF02254 TrkA-N domain LB319_04475 PF00999 Sodium/hydrogen exchanger family LB319_04480 PF04966 Carbohydrate-selective porin, OprB family LB319_04490 PF00158 Sigma-54 interaction domain LB319_04490 PF02954 Bacterial regulatory protein, Fis family LB319_04490 PF06490 Flagellar regulatory protein FleQ LB319_04495 PF01243 Pyridoxamine 5'-phosphate oxidase LB319_04495 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LB319_04500 PF02547 Queuosine biosynthesis protein LB319_04505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LB319_04510 PF01467 Cytidylyltransferase-like LB319_04515 PF00348 Polyprenyl synthetase LB319_04520 PF02609 Exonuclease VII small subunit LB319_04530 PF00266 Aminotransferase class-V LB319_04535 PF00111 2Fe-2S iron-sulfur cluster binding domain LB319_04545 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LB319_04545 PF12169 DNA polymerase III subunits gamma and tau domain III LB319_04545 PF12170 DNA polymerase III tau subunit V interacting with alpha LB319_04550 PF02575 YbaB/EbfC DNA-binding family LB319_04555 PF00692 dUTPase LB319_04560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LB319_04565 PF00772 DnaB-like helicase N terminal domain LB319_04565 PF03796 DnaB-like helicase C terminal domain LB319_04570 PF01545 Cation efflux family LB319_04575 PF01370 NAD dependent epimerase/dehydratase family LB319_04595 PF01593 Flavin containing amine oxidoreductase LB319_04600 PF13249 Squalene-hopene cyclase N-terminal domain LB319_04600 PF13243 Squalene-hopene cyclase C-terminal domain LB319_04610 PF04055 Radical SAM superfamily LB319_04615 PF02401 LytB protein LB319_04630 PF01339 CheB methylesterase LB319_04630 PF00072 Response regulator receiver domain LB319_04635 PF01627 Hpt domain LB319_04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_04635 PF01584 CheW-like domain LB319_04635 PF02895 Signal transducing histidine kinase, homodimeric domain LB319_04640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB319_04640 PF00672 HAMP domain LB319_04640 PF02203 Tar ligand binding domain homologue LB319_04645 PF00380 Ribosomal protein S9/S16 LB319_04650 PF00572 Ribosomal protein L13 LB319_04665 PF02796 Helix-turn-helix domain of resolvase LB319_04665 PF00239 Resolvase, N terminal domain LB319_04670 PF01263 Aldose 1-epimerase LB319_04675 PF01921 tRNA synthetases class I (K) LB319_04680 PF13307 Helicase C-terminal domain LB319_04680 PF04851 Type III restriction enzyme, res subunit LB319_04680 PF00929 Exonuclease LB319_04685 PF00144 Beta-lactamase LB319_04710 PF00795 Carbon-nitrogen hydrolase LB319_04710 PF02540 NAD synthase LB319_04715 PF00749 tRNA synthetases class I (E and Q), catalytic domain LB319_04725 PF00593 TonB dependent receptor LB319_04730 PF08502 LeuA allosteric (dimerisation) domain LB319_04730 PF00682 HMGL-like LB319_04740 PF04349 Periplasmic glucan biosynthesis protein, MdoG LB319_04745 PF13632 Glycosyl transferase family group 2 LB319_04765 PF00005 ABC transporter LB319_04770 PF02563 Polysaccharide biosynthesis/export protein LB319_04780 PF01063 Amino-transferase class IV LB319_04785 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LB319_04785 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LB319_04790 PF00403 Heavy-metal-associated domain LB319_04805 PF06628 Catalase-related immune-responsive LB319_04805 PF00199 Catalase LB319_04810 PF00990 Diguanylate cyclase, GGDEF domain LB319_04830 PF01960 ArgJ family LB319_04835 PF02810 SEC-C motif LB319_04835 PF07517 SecA DEAD-like domain LB319_04835 PF01043 SecA preprotein cross-linking domain LB319_04835 PF07516 SecA Wing and Scaffold domain LB319_04840 PF00313 'Cold-shock' DNA-binding domain LB319_04855 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LB319_04860 PF03576 Peptidase family S58 LB319_04890 PF00892 EamA-like transporter family LB319_04895 PF00155 Aminotransferase class I and II LB319_04900 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase LB319_04905 PF01979 Amidohydrolase family LB319_04910 PF12802 MarR family LB319_04915 PF01370 NAD dependent epimerase/dehydratase family LB319_04925 PF08244 Glycosyl hydrolases family 32 C terminal LB319_04925 PF00251 Glycosyl hydrolases family 32 N-terminal domain LB319_04945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LB319_04945 PF05698 Bacterial trigger factor protein (TF) C-terminus LB319_04945 PF05697 Bacterial trigger factor protein (TF) LB319_04955 PF00574 Clp protease LB319_04960 PF06689 ClpX C4-type zinc finger LB319_04960 PF10431 C-terminal, D2-small domain, of ClpB protein LB319_04960 PF07724 AAA domain (Cdc48 subfamily) LB319_04970 PF01218 Coproporphyrinogen III oxidase LB319_04975 PF00588 SpoU rRNA Methylase family LB319_04990 PF13340 Putative transposase of IS4/5 family (DUF4096) LB319_04995 PF00355 Rieske [2Fe-2S] domain LB319_04995 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LB319_05000 PF00032 Cytochrome b(C-terminal)/b6/petD LB319_05000 PF00033 Cytochrome b/b6/petB LB319_05005 PF02167 Cytochrome C1 family LB319_05010 PF00912 Transglycosylase LB319_05020 PF01979 Amidohydrolase family LB319_05025 PF00440 Bacterial regulatory proteins, tetR family LB319_05030 PF02321 Outer membrane efflux protein LB319_05035 PF00529 HlyD membrane-fusion protein of T1SS LB319_05035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LB319_05040 PF07690 Major Facilitator Superfamily LB319_05045 PF07670 Nucleoside recognition LB319_05045 PF07662 Na+ dependent nucleoside transporter C-terminus LB319_05045 PF01773 Na+ dependent nucleoside transporter N-terminus LB319_05055 PF00860 Permease family LB319_05065 PF00962 Adenosine/AMP deaminase LB319_05080 PF04794 YdjC-like protein LB319_05095 PF00248 Aldo/keto reductase family LB319_05105 PF07715 TonB-dependent Receptor Plug Domain LB319_05105 PF00593 TonB dependent receptor LB319_05110 PF00712 DNA polymerase III beta subunit, N-terminal domain LB319_05110 PF02767 DNA polymerase III beta subunit, central domain LB319_05110 PF02768 DNA polymerase III beta subunit, C-terminal domain LB319_05115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LB319_05115 PF00005 ABC transporter LB319_05120 PF12911 N-terminal TM domain of oligopeptide transport permease C LB319_05120 PF00528 Binding-protein-dependent transport system inner membrane component LB319_05125 PF00528 Binding-protein-dependent transport system inner membrane component LB319_05135 PF01975 Survival protein SurE LB319_05140 PF02403 Seryl-tRNA synthetase N-terminal domain LB319_05140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LB319_05145 PF01258 Prokaryotic dksA/traR C4-type zinc finger LB319_05160 PF00011 Hsp20/alpha crystallin family LB319_05175 PF00924 Mechanosensitive ion channel LB319_05180 PF01081 KDPG and KHG aldolase LB319_05185 PF01625 Peptide methionine sulfoxide reductase LB319_05190 PF03481 Putative GTP-binding controlling metal-binding LB319_05190 PF01300 Telomere recombination LB319_05195 PF08267 Cobalamin-independent synthase, N-terminal domain LB319_05195 PF01717 Cobalamin-independent synthase, Catalytic domain LB319_05200 PF00854 POT family LB319_05205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LB319_05205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LB319_05205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LB319_05205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LB319_05210 PF08543 Phosphomethylpyrimidine kinase LB319_05210 PF02581 Thiamine monophosphate synthase LB319_05215 PF01351 Ribonuclease HII LB319_05220 PF01555 DNA methylase LB319_05220 PF18755 Restriction Enzyme Adenine Methylase Associated LB319_05225 PF00809 Pterin binding enzyme LB319_05230 PF01062 Bestrophin, RFP-TM, chloride channel LB319_05235 PF02913 FAD linked oxidases, C-terminal domain LB319_05235 PF01565 FAD binding domain LB319_05245 PF13811 Domain of unknown function (DUF4186) LB319_05255 PF03884 DNA gyrase inhibitor YacG LB319_05265 PF02545 Maf-like protein LB319_05270 PF01176 Translation initiation factor 1A / IF-1 LB319_05285 PF00005 ABC transporter LB319_05290 PF02405 Permease MlaE LB319_05295 PF01916 Deoxyhypusine synthase LB319_05300 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LB319_05300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LB319_05305 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LB319_05310 PF00266 Aminotransferase class-V LB319_05315 PF06508 Queuosine biosynthesis protein QueC LB319_05330 PF00005 ABC transporter LB319_05340 PF04055 Radical SAM superfamily LB319_05355 PF00764 Arginosuccinate synthase LB319_05365 PF03477 ATP cone domain LB319_05365 PF02867 Ribonucleotide reductase, barrel domain LB319_05365 PF00317 Ribonucleotide reductase, all-alpha domain LB319_05380 PF00293 NUDIX domain LB319_05385 PF04536 TPM domain LB319_05395 PF01741 Large-conductance mechanosensitive channel, MscL LB319_05405 PF12849 PBP superfamily domain LB319_05410 PF00528 Binding-protein-dependent transport system inner membrane component LB319_05415 PF00528 Binding-protein-dependent transport system inner membrane component LB319_05420 PF00005 ABC transporter LB319_05425 PF01259 SAICAR synthetase LB319_05430 PF00521 DNA gyrase/topoisomerase IV, subunit A LB319_05430 PF03989 DNA gyrase C-terminal domain, beta-propeller LB319_05435 PF00990 Diguanylate cyclase, GGDEF domain LB319_05435 PF00563 EAL domain LB319_05435 PF08448 PAS fold LB319_05435 PF08447 PAS fold LB319_05440 PF12627 Probable RNA and SrmB- binding site of polymerase A LB319_05440 PF01743 Poly A polymerase head domain LB319_05440 PF12626 Polymerase A arginine-rich C-terminus LB319_05455 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LB319_05455 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LB319_05460 PF02954 Bacterial regulatory protein, Fis family LB319_05460 PF00158 Sigma-54 interaction domain LB319_05470 PF04012 PspA/IM30 family LB319_05490 PF02657 Fe-S metabolism associated domain LB319_05500 PF01556 DnaJ C terminal domain LB319_05500 PF00684 DnaJ central domain LB319_05500 PF00226 DnaJ domain LB319_05510 PF00448 SRP54-type protein, GTPase domain LB319_05510 PF02881 SRP54-type protein, helical bundle domain LB319_05515 PF04055 Radical SAM superfamily LB319_05515 PF00919 Uncharacterized protein family UPF0004 LB319_05520 PF01678 Diaminopimelate epimerase LB319_05525 PF00448 SRP54-type protein, GTPase domain LB319_05525 PF02978 Signal peptide binding domain LB319_05525 PF02881 SRP54-type protein, helical bundle domain LB319_05530 PF00886 Ribosomal protein S16 LB319_05535 PF05239 PRC-barrel domain LB319_05535 PF01782 RimM N-terminal domain LB319_05540 PF01746 tRNA (Guanine-1)-methyltransferase LB319_05545 PF01245 Ribosomal protein L19 LB319_05565 PF00535 Glycosyl transferase family 2 LB319_05565 PF03552 Cellulose synthase LB319_05565 PF07238 PilZ domain LB319_05570 PF03170 Bacterial cellulose synthase subunit LB319_05575 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LB319_05580 PF01270 Glycosyl hydrolases family 8 LB319_05585 PF13406 Transglycosylase SLT domain LB319_05590 PF05036 Sporulation related domain LB319_05590 PF03330 Lytic transglycolase LB319_05595 PF07943 Penicillin-binding protein 5, C-terminal domain LB319_05595 PF00768 D-alanyl-D-alanine carboxypeptidase LB319_05600 PF02223 Thymidylate kinase LB319_05605 PF12169 DNA polymerase III subunits gamma and tau domain III LB319_05610 PF08264 Anticodon-binding domain of tRNA LB319_05610 PF09334 tRNA synthetases class I (M) LB319_05615 PF01026 TatD related DNase LB319_05625 PF03819 MazG nucleotide pyrophosphohydrolase domain LB319_05630 PF00773 RNB domain LB319_05630 PF08461 Ribonuclease R winged-helix domain LB319_05630 PF17876 Cold shock domain LB319_05630 PF00575 S1 RNA binding domain LB319_05630 PF08206 Ribonuclease B OB domain LB319_05635 PF00085 Thioredoxin LB319_05640 PF12705 PD-(D/E)XK nuclease superfamily LB319_05640 PF00580 UvrD/REP helicase N-terminal domain LB319_05640 PF13361 UvrD-like helicase C-terminal domain LB319_05645 PF12705 PD-(D/E)XK nuclease superfamily LB319_05650 PF12804 MobA-like NTP transferase domain LB319_05655 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LB319_05660 PF00512 His Kinase A (phospho-acceptor) domain LB319_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_05670 PF13188 PAS domain LB319_05670 PF00989 PAS fold LB319_05670 PF00512 His Kinase A (phospho-acceptor) domain LB319_05675 PF01037 Lrp/AsnC ligand binding domain LB319_05685 PF07690 Major Facilitator Superfamily LB319_05690 PF04279 Intracellular septation protein A LB319_05695 PF07992 Pyridine nucleotide-disulphide oxidoreductase LB319_05700 PF03167 Uracil DNA glycosylase superfamily LB319_05710 PF02673 Bacitracin resistance protein BacA LB319_05715 PF07992 Pyridine nucleotide-disulphide oxidoreductase LB319_05715 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LB319_05720 PF04898 Glutamate synthase central domain LB319_05720 PF01493 GXGXG motif LB319_05720 PF01645 Conserved region in glutamate synthase LB319_05720 PF00310 Glutamine amidotransferases class-II LB319_05725 PF00043 Glutathione S-transferase, C-terminal domain LB319_05725 PF13417 Glutathione S-transferase, N-terminal domain LB319_05730 PF13411 MerR HTH family regulatory protein LB319_05735 PF00216 Bacterial DNA-binding protein LB319_05745 PF00158 Sigma-54 interaction domain LB319_05745 PF00072 Response regulator receiver domain LB319_05745 PF02954 Bacterial regulatory protein, Fis family LB319_05750 PF00512 His Kinase A (phospho-acceptor) domain LB319_05750 PF00989 PAS fold LB319_05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_05750 PF00672 HAMP domain LB319_05755 PF00158 Sigma-54 interaction domain LB319_05755 PF00072 Response regulator receiver domain LB319_05755 PF02954 Bacterial regulatory protein, Fis family LB319_05760 PF01207 Dihydrouridine synthase (Dus) LB319_05765 PF02542 YgbB family LB319_05765 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LB319_05775 PF18146 Damage-inducible protein CinA KH domain LB319_05775 PF00994 Probable molybdopterin binding domain LB319_05775 PF02464 Competence-damaged protein LB319_05780 PF03364 Polyketide cyclase / dehydrase and lipid transport LB319_05785 PF04055 Radical SAM superfamily LB319_05785 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LB319_05790 PF00484 Carbonic anhydrase LB319_05800 PF01523 Putative modulator of DNA gyrase LB319_05805 PF03150 Di-haem cytochrome c peroxidase LB319_05805 PF00034 Cytochrome c LB319_05805 PF14376 Haem-binding domain LB319_05820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LB319_05820 PF00205 Thiamine pyrophosphate enzyme, central domain LB319_05820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LB319_05825 PF10369 Small subunit of acetolactate synthase LB319_05830 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LB319_05830 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LB319_05835 PF07992 Pyridine nucleotide-disulphide oxidoreductase LB319_05850 PF01197 Ribosomal protein L31 LB319_05855 PF07977 FabA-like domain LB319_05865 PF01103 Surface antigen LB319_05865 PF07244 Surface antigen variable number repeat LB319_05870 PF17820 PDZ domain LB319_05870 PF02163 Peptidase family M50 LB319_05875 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LB319_05875 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LB319_05875 PF13288 DXP reductoisomerase C-terminal domain LB319_05885 PF01255 Putative undecaprenyl diphosphate synthase LB319_05890 PF01765 Ribosome recycling factor LB319_05895 PF00696 Amino acid kinase family LB319_05900 PF00889 Elongation factor TS LB319_05905 PF00318 Ribosomal protein S2 LB319_05915 PF01177 Asp/Glu/Hydantoin racemase LB319_05920 PF01066 CDP-alcohol phosphatidyltransferase LB319_05925 PF02666 Phosphatidylserine decarboxylase LB319_05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_05930 PF00512 His Kinase A (phospho-acceptor) domain LB319_05930 PF00989 PAS fold LB319_05930 PF11808 Phosphate regulon sensor protein PhoR LB319_05935 PF01895 PhoU domain LB319_05940 PF00072 Response regulator receiver domain LB319_05940 PF00486 Transcriptional regulatory protein, C terminal LB319_05950 PF00154 recA bacterial DNA recombination protein LB319_05955 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LB319_05955 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LB319_05960 PF01869 BadF/BadG/BcrA/BcrD ATPase family LB319_05970 PF00933 Glycosyl hydrolase family 3 N terminal domain LB319_05975 PF04996 Succinylarginine dihydrolase LB319_05990 PF16527 Two-component sensor protein CpxA, periplasmic domain LB319_05990 PF00672 HAMP domain LB319_05990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_05990 PF00512 His Kinase A (phospho-acceptor) domain LB319_05995 PF00072 Response regulator receiver domain LB319_05995 PF00486 Transcriptional regulatory protein, C terminal LB319_06000 PF01502 Phosphoribosyl-AMP cyclohydrolase LB319_06005 PF05958 tRNA (Uracil-5-)-methyltransferase LB319_06010 PF01256 Carbohydrate kinase LB319_06010 PF03853 YjeF-related protein N-terminus LB319_06020 PF00288 GHMP kinases N terminal domain LB319_06020 PF08544 GHMP kinases C terminal LB319_06045 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LB319_06045 PF06827 Zinc finger found in FPG and IleRS LB319_06045 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LB319_06055 PF01209 ubiE/COQ5 methyltransferase family LB319_06060 PF03109 ABC1 family LB319_06065 PF04127 DNA / pantothenate metabolism flavoprotein LB319_06065 PF02441 Flavoprotein LB319_06070 PF00692 dUTPase LB319_06075 PF00899 ThiF family LB319_06080 PF01131 DNA topoisomerase LB319_06080 PF01751 Toprim domain LB319_06080 PF13368 Topoisomerase C-terminal repeat LB319_06080 PF01396 Topoisomerase DNA binding C4 zinc finger LB319_06085 PF02481 DNA recombination-mediator protein A LB319_06085 PF17782 DprA winged helix domain LB319_06090 PF02660 Glycerol-3-phosphate acyltransferase LB319_06095 PF07690 Major Facilitator Superfamily LB319_06100 PF01177 Asp/Glu/Hydantoin racemase LB319_06105 PF00155 Aminotransferase class I and II LB319_06110 PF02502 Ribose/Galactose Isomerase LB319_06115 PF00464 Serine hydroxymethyltransferase LB319_06120 PF03477 ATP cone domain LB319_06125 PF00588 SpoU rRNA Methylase family LB319_06140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_06140 PF03466 LysR substrate binding domain LB319_06145 PF00795 Carbon-nitrogen hydrolase LB319_06155 PF02705 K+ potassium transporter LB319_06165 PF07992 Pyridine nucleotide-disulphide oxidoreductase LB319_06165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LB319_06170 PF00342 Phosphoglucose isomerase LB319_06180 PF00270 DEAD/DEAH box helicase LB319_06180 PF00271 Helicase conserved C-terminal domain LB319_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_06190 PF12282 Signal transduction histidine kinase LB319_06190 PF07568 Histidine kinase LB319_06200 PF00902 Sec-independent protein translocase protein (TatC) LB319_06205 PF02416 mttA/Hcf106 family LB319_06210 PF02416 mttA/Hcf106 family LB319_06225 PF00698 Acyl transferase domain LB319_06230 PF01250 Ribosomal protein S6 LB319_06235 PF01084 Ribosomal protein S18 LB319_06240 PF01281 Ribosomal protein L9, N-terminal domain LB319_06240 PF03948 Ribosomal protein L9, C-terminal domain LB319_06245 PF13378 Enolase C-terminal domain-like LB319_06245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LB319_06250 PF01227 GTP cyclohydrolase I LB319_06255 PF01368 DHH family LB319_06255 PF02272 DHHA1 domain LB319_06255 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LB319_06255 PF17768 RecJ OB domain LB319_06270 PF01050 Mannose-6-phosphate isomerase LB319_06270 PF00483 Nucleotidyl transferase LB319_06275 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LB319_06275 PF02779 Transketolase, pyrimidine binding domain LB319_06275 PF02780 Transketolase, C-terminal domain LB319_06285 PF00107 Zinc-binding dehydrogenase LB319_06285 PF08240 Alcohol dehydrogenase GroES-like domain LB319_06290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LB319_06290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LB319_06295 PF00300 Histidine phosphatase superfamily (branch 1) LB319_06300 PF00246 Zinc carboxypeptidase LB319_06300 PF18027 Cytosolic carboxypeptidase N-terminal domain LB319_06305 PF13590 Domain of unknown function (DUF4136) LB319_06310 PF00444 Ribosomal protein L36 LB319_06335 PF03918 Cytochrome C biogenesis protein LB319_06340 PF08534 Redoxin LB319_06345 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LB319_06345 PF01578 Cytochrome C assembly protein LB319_06350 PF03100 CcmE LB319_06360 PF01578 Cytochrome C assembly protein LB319_06365 PF00593 TonB dependent receptor LB319_06365 PF07715 TonB-dependent Receptor Plug Domain LB319_06370 PF09084 NMT1/THI5 like LB319_06375 PF00528 Binding-protein-dependent transport system inner membrane component LB319_06380 PF00005 ABC transporter LB319_06385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LB319_06385 PF13378 Enolase C-terminal domain-like LB319_06395 PF02540 NAD synthase LB319_06395 PF00958 GMP synthase C terminal domain LB319_06395 PF00117 Glutamine amidotransferase class-I LB319_06410 PF00155 Aminotransferase class I and II LB319_06415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LB319_06415 PF14824 Sirohaem biosynthesis protein central LB319_06415 PF10414 Sirohaem synthase dimerisation region LB319_06420 PF00171 Aldehyde dehydrogenase family LB319_06430 PF00291 Pyridoxal-phosphate dependent enzyme LB319_06430 PF13291 ACT domain LB319_06440 PF02618 YceG-like family LB319_06445 PF00109 Beta-ketoacyl synthase, N-terminal domain LB319_06445 PF02801 Beta-ketoacyl synthase, C-terminal domain LB319_06450 PF00550 Phosphopantetheine attachment site LB319_06455 PF00356 Bacterial regulatory proteins, lacI family LB319_06460 PF00034 Cytochrome c LB319_06460 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LB319_06465 PF00732 GMC oxidoreductase LB319_06465 PF05199 GMC oxidoreductase LB319_06475 PF00534 Glycosyl transferases group 1 LB319_06475 PF13439 Glycosyltransferase Family 4 LB319_06480 PF07690 Major Facilitator Superfamily LB319_06485 PF04226 Transglycosylase associated protein LB319_06495 PF13580 SIS domain LB319_06520 PF00593 TonB dependent receptor LB319_06520 PF07715 TonB-dependent Receptor Plug Domain LB319_06545 PF03099 Biotin/lipoate A/B protein ligase family LB319_06550 PF14748 Pyrroline-5-carboxylate reductase dimerisation LB319_06550 PF03807 NADP oxidoreductase coenzyme F420-dependent LB319_06565 PF01479 S4 domain LB319_06565 PF01728 FtsJ-like methyltransferase LB319_06570 PF05683 Fumarase C-terminus LB319_06570 PF05681 Fumarate hydratase (Fumerase) LB319_06580 PF02789 Cytosol aminopeptidase family, N-terminal domain LB319_06580 PF00883 Cytosol aminopeptidase family, catalytic domain LB319_06585 PF04453 LPS transport system D LB319_06590 PF09312 SurA N-terminal domain LB319_06590 PF00639 PPIC-type PPIASE domain LB319_06595 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LB319_06600 PF00398 Ribosomal RNA adenine dimethylase LB319_06610 PF01943 Polysaccharide biosynthesis protein LB319_06630 PF01029 NusB family LB319_06630 PF01189 16S rRNA methyltransferase RsmB/F LB319_06635 PF00478 IMP dehydrogenase / GMP reductase domain LB319_06635 PF00571 CBS domain LB319_06640 PF00486 Transcriptional regulatory protein, C terminal LB319_06640 PF00072 Response regulator receiver domain LB319_06645 PF13755 Sensor N-terminal transmembrane domain LB319_06645 PF00672 HAMP domain LB319_06645 PF00512 His Kinase A (phospho-acceptor) domain LB319_06645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_06645 PF13756 Stimulus-sensing domain LB319_06650 PF02603 HPr Serine kinase N terminus LB319_06650 PF07475 HPr Serine kinase C-terminal domain LB319_06655 PF03668 P-loop ATPase protein family LB319_06660 PF03830 PTS system sorbose subfamily IIB component LB319_06660 PF03610 PTS system fructose IIA component LB319_06665 PF00381 PTS HPr component phosphorylation site LB319_06670 PF08032 RNA 2'-O ribose methyltransferase substrate binding LB319_06670 PF00588 SpoU rRNA Methylase family LB319_06675 PF01513 ATP-NAD kinase LB319_06680 PF00924 Mechanosensitive ion channel LB319_06685 PF04264 YceI-like domain LB319_06690 PF03358 NADPH-dependent FMN reductase LB319_06695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_06695 PF03466 LysR substrate binding domain LB319_06700 PF17954 Quercetinase C-terminal cupin domain LB319_06700 PF02678 Pirin LB319_06705 PF01810 LysE type translocator LB319_06715 PF04228 Putative neutral zinc metallopeptidase LB319_06725 PF00248 Aldo/keto reductase family LB319_06730 PF11940 Domain of unknown function (DUF3458) Ig-like fold LB319_06730 PF01433 Peptidase family M1 domain LB319_06730 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LB319_06740 PF01212 Beta-eliminating lyase LB319_06745 PF00557 Metallopeptidase family M24 LB319_06750 PF00994 Probable molybdopterin binding domain LB319_06750 PF18146 Damage-inducible protein CinA KH domain LB319_06750 PF02464 Competence-damaged protein LB319_06755 PF01738 Dienelactone hydrolase family LB319_06760 PF01027 Inhibitor of apoptosis-promoting Bax1 LB319_06765 PF03928 Haem-degrading LB319_06770 PF00691 OmpA family LB319_06775 PF12848 ABC transporter LB319_06775 PF00005 ABC transporter LB319_06780 PF11638 DnaA N-terminal domain LB319_06780 PF08299 Bacterial dnaA protein helix-turn-helix LB319_06780 PF00308 Bacterial dnaA protein LB319_06785 PF01649 Ribosomal protein S20 LB319_06790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LB319_06790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LB319_06790 PF00205 Thiamine pyrophosphate enzyme, central domain LB319_06800 PF04055 Radical SAM superfamily LB319_06805 PF00990 Diguanylate cyclase, GGDEF domain LB319_06810 PF00163 Ribosomal protein S4/S9 N-terminal domain LB319_06810 PF01479 S4 domain LB319_06815 PF04371 Porphyromonas-type peptidyl-arginine deiminase LB319_06820 PF00795 Carbon-nitrogen hydrolase LB319_06830 PF00106 short chain dehydrogenase LB319_06840 PF01370 NAD dependent epimerase/dehydratase family LB319_06840 PF08338 Domain of unknown function (DUF1731) LB319_06845 PF14622 Ribonuclease-III-like LB319_06845 PF00035 Double-stranded RNA binding motif LB319_06875 PF00202 Aminotransferase class-III LB319_06880 PF07650 KH domain LB319_06880 PF01926 50S ribosome-binding GTPase LB319_06895 PF00486 Transcriptional regulatory protein, C terminal LB319_06895 PF00072 Response regulator receiver domain LB319_06960 PF03372 Endonuclease/Exonuclease/phosphatase family LB319_06965 PF01521 Iron-sulphur cluster biosynthesis LB319_06970 PF08525 Opacity-associated protein A N-terminal motif LB319_06970 PF01551 Peptidase family M23 LB319_06970 PF01476 LysM domain LB319_06975 PF04542 Sigma-70 region 2 LB319_06975 PF08281 Sigma-70, region 4 LB319_06980 PF00072 Response regulator receiver domain LB319_06985 PF00561 alpha/beta hydrolase fold LB319_06990 PF01118 Semialdehyde dehydrogenase, NAD binding domain LB319_06990 PF02774 Semialdehyde dehydrogenase, dimerisation domain LB319_06995 PF00326 Prolyl oligopeptidase family LB319_06995 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LB319_07010 PF00210 Ferritin-like domain LB319_07015 PF01475 Ferric uptake regulator family LB319_07020 PF05443 ROS/MUCR transcriptional regulator protein LB319_07030 PF00814 Glycoprotease family LB319_07040 PF00271 Helicase conserved C-terminal domain LB319_07040 PF00270 DEAD/DEAH box helicase LB319_07050 PF01040 UbiA prenyltransferase family LB319_07055 PF00731 AIR carboxylase LB319_07060 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LB319_07060 PF02222 ATP-grasp domain LB319_07065 PF05193 Peptidase M16 inactive domain LB319_07065 PF00675 Insulinase (Peptidase family M16) LB319_07070 PF05193 Peptidase M16 inactive domain LB319_07070 PF00675 Insulinase (Peptidase family M16) LB319_07075 PF02861 Clp amino terminal domain, pathogenicity island component LB319_07075 PF17871 AAA lid domain LB319_07075 PF07724 AAA domain (Cdc48 subfamily) LB319_07075 PF00004 ATPase family associated with various cellular activities (AAA) LB319_07075 PF10431 C-terminal, D2-small domain, of ClpB protein LB319_07080 PF02581 Thiamine monophosphate synthase LB319_07085 PF04002 RadC-like JAB domain LB319_07090 PF00781 Diacylglycerol kinase catalytic domain LB319_07100 PF13533 Biotin-lipoyl like LB319_07125 PF13603 Leucyl-tRNA synthetase, Domain 2 LB319_07125 PF00133 tRNA synthetases class I (I, L, M and V) LB319_07125 PF08264 Anticodon-binding domain of tRNA LB319_07130 PF12100 Domain of unknown function (DUF3576) LB319_07140 PF13404 AsnC-type helix-turn-helix domain LB319_07140 PF01037 Lrp/AsnC ligand binding domain LB319_07145 PF00795 Carbon-nitrogen hydrolase LB319_07155 PF01266 FAD dependent oxidoreductase LB319_07165 PF01943 Polysaccharide biosynthesis protein LB319_07170 PF02092 Glycyl-tRNA synthetase beta subunit LB319_07170 PF05746 DALR anticodon binding domain LB319_07175 PF02091 Glycyl-tRNA synthetase alpha subunit LB319_07195 PF08125 Mannitol dehydrogenase C-terminal domain LB319_07195 PF01232 Mannitol dehydrogenase Rossmann domain LB319_07200 PF03441 FAD binding domain of DNA photolyase LB319_07200 PF00875 DNA photolyase LB319_07210 PF07690 Major Facilitator Superfamily LB319_07215 PF00239 Resolvase, N terminal domain LB319_07215 PF02796 Helix-turn-helix domain of resolvase LB319_07275 PF01061 ABC-2 type transporter LB319_07290 PF03144 Elongation factor Tu domain 2 LB319_07290 PF00679 Elongation factor G C-terminus LB319_07290 PF00009 Elongation factor Tu GTP binding domain LB319_07300 PF07715 TonB-dependent Receptor Plug Domain LB319_07300 PF00593 TonB dependent receptor LB319_07315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LB319_07320 PF00766 Electron transfer flavoprotein FAD-binding domain LB319_07320 PF01012 Electron transfer flavoprotein domain LB319_07325 PF01012 Electron transfer flavoprotein domain LB319_07330 PF00549 CoA-ligase LB319_07330 PF08442 ATP-grasp domain LB319_07340 PF13361 UvrD-like helicase C-terminal domain LB319_07340 PF00580 UvrD/REP helicase N-terminal domain LB319_07345 PF01966 HD domain LB319_07355 PF05231 MASE1 LB319_07355 PF00563 EAL domain LB319_07360 PF00793 DAHP synthetase I family LB319_07365 PF02348 Cytidylyltransferase LB319_07390 PF00696 Amino acid kinase family LB319_07395 PF01923 Cobalamin adenosyltransferase LB319_07400 PF00311 Phosphoenolpyruvate carboxylase LB319_07405 PF13520 Amino acid permease LB319_07410 PF01230 HIT domain LB319_07415 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LB319_07420 PF00977 Histidine biosynthesis protein LB319_07425 PF00977 Histidine biosynthesis protein LB319_07430 PF00117 Glutamine amidotransferase class-I LB319_07435 PF00475 Imidazoleglycerol-phosphate dehydratase LB319_07450 PF00719 Inorganic pyrophosphatase LB319_07455 PF13393 Histidyl-tRNA synthetase LB319_07460 PF03462 PCRF domain LB319_07460 PF00472 RF-1 domain LB319_07465 PF05175 Methyltransferase small domain LB319_07465 PF17827 PrmC N-terminal domain LB319_07475 PF00664 ABC transporter transmembrane region LB319_07475 PF00005 ABC transporter LB319_07480 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LB319_07480 PF01588 Putative tRNA binding domain LB319_07480 PF03147 Ferredoxin-fold anticodon binding domain LB319_07480 PF03484 tRNA synthetase B5 domain LB319_07480 PF03483 B3/4 domain LB319_07485 PF01409 tRNA synthetases class II core domain (F) LB319_07485 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LB319_07490 PF00453 Ribosomal protein L20 LB319_07495 PF01632 Ribosomal protein L35 LB319_07500 PF00459 Inositol monophosphatase family LB319_07505 PF14572 Phosphoribosyl synthetase-associated domain LB319_07505 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LB319_07520 PF07715 TonB-dependent Receptor Plug Domain LB319_07520 PF00593 TonB dependent receptor LB319_07530 PF02321 Outer membrane efflux protein LB319_07535 PF00873 AcrB/AcrD/AcrF family LB319_07540 PF00873 AcrB/AcrD/AcrF family LB319_07545 PF13533 Biotin-lipoyl like LB319_07550 PF01380 SIS domain LB319_07550 PF00571 CBS domain LB319_07555 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LB319_07585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LB319_07585 PF14579 Helix-hairpin-helix motif LB319_07585 PF02811 PHP domain LB319_07585 PF07733 Bacterial DNA polymerase III alpha NTPase domain LB319_07595 PF07664 Ferrous iron transport protein B C terminus LB319_07595 PF07670 Nucleoside recognition LB319_07595 PF02421 Ferrous iron transport protein B LB319_07600 PF00436 Single-strand binding protein family LB319_07605 PF06213 Cobalamin biosynthesis protein CobT LB319_07605 PF11775 Cobalamin biosynthesis protein CobT VWA domain LB319_07610 PF07728 AAA domain (dynein-related subfamily) LB319_07610 PF12556 Cobaltochelatase CobS subunit N terminal LB319_07610 PF08406 CbbQ/NirQ/NorQ C-terminal LB319_07615 PF00226 DnaJ domain LB319_07625 PF13249 Squalene-hopene cyclase N-terminal domain LB319_07625 PF13243 Squalene-hopene cyclase C-terminal domain LB319_07635 PF01634 ATP phosphoribosyltransferase LB319_07640 PF00815 Histidinol dehydrogenase LB319_07645 PF01029 NusB family LB319_07650 PF02769 AIR synthase related protein, C-terminal domain LB319_07650 PF00586 AIR synthase related protein, N-terminal domain LB319_07655 PF04452 RNA methyltransferase LB319_07660 PF04107 Glutamate-cysteine ligase family 2(GCS2) LB319_07665 PF13537 Glutamine amidotransferase domain LB319_07665 PF00156 Phosphoribosyl transferase domain LB319_07670 PF00106 short chain dehydrogenase LB319_07675 PF00293 NUDIX domain LB319_07695 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LB319_07710 PF04055 Radical SAM superfamily LB319_07715 PF01228 Glycine radical LB319_07715 PF02901 Pyruvate formate lyase-like LB319_07720 PF01654 Cytochrome bd terminal oxidase subunit I LB319_07725 PF02322 Cytochrome bd terminal oxidase subunit II LB319_07740 PF03466 LysR substrate binding domain LB319_07740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_07745 PF00106 short chain dehydrogenase LB319_07750 PF07690 Major Facilitator Superfamily LB319_07760 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LB319_07805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_07805 PF01751 Toprim domain LB319_07805 PF00204 DNA gyrase B LB319_07805 PF00986 DNA gyrase B subunit, carboxyl terminus LB319_07810 PF02463 RecF/RecN/SMC N terminal domain LB319_07815 PF00210 Ferritin-like domain LB319_07825 PF17760 UvrA interaction domain LB319_07825 PF17755 UvrA DNA-binding domain LB319_07835 PF00005 ABC transporter LB319_07840 PF02405 Permease MlaE LB319_07845 PF01168 Alanine racemase, N-terminal domain LB319_07845 PF00842 Alanine racemase, C-terminal domain LB319_07855 PF00465 Iron-containing alcohol dehydrogenase LB319_07860 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LB319_07860 PF02780 Transketolase, C-terminal domain LB319_07860 PF02779 Transketolase, pyrimidine binding domain LB319_07870 PF01636 Phosphotransferase enzyme family LB319_07875 PF00075 RNase H LB319_07885 PF04273 Putative phosphatase (DUF442) LB319_07885 PF00753 Metallo-beta-lactamase superfamily LB319_07895 PF02780 Transketolase, C-terminal domain LB319_07895 PF02779 Transketolase, pyrimidine binding domain LB319_07895 PF00364 Biotin-requiring enzyme LB319_07900 PF00676 Dehydrogenase E1 component LB319_07910 PF00113 Enolase, C-terminal TIM barrel domain LB319_07910 PF03952 Enolase, N-terminal domain LB319_07940 PF01272 Transcription elongation factor, GreA/GreB, C-term LB319_07940 PF03449 Transcription elongation factor, N-terminal LB319_07945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LB319_07945 PF02142 MGS-like domain LB319_07945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LB319_07950 PF00117 Glutamine amidotransferase class-I LB319_07950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LB319_07960 PF01807 CHC2 zinc finger LB319_07960 PF08275 DNA primase catalytic core, N-terminal domain LB319_07960 PF08278 DNA primase DnaG DnaB-binding LB319_07960 PF10410 DnaB-helicase binding domain of primase LB319_07965 PF03979 Sigma-70 factor, region 1.1 LB319_07965 PF04542 Sigma-70 region 2 LB319_07965 PF04545 Sigma-70, region 4 LB319_07965 PF04539 Sigma-70 region 3 LB319_07965 PF04546 Sigma-70, non-essential region LB319_07965 PF00140 Sigma-70 factor, region 1.2 LB319_07970 PF13335 Magnesium chelatase, subunit ChlI C-terminal LB319_07970 PF01078 Magnesium chelatase, subunit ChlI LB319_07975 PF00468 Ribosomal protein L34 LB319_07980 PF00825 Ribonuclease P LB319_07985 PF01809 Putative membrane protein insertion efficiency factor LB319_07990 PF14849 YidC periplasmic domain LB319_07990 PF02096 60Kd inner membrane protein LB319_07995 PF01926 50S ribosome-binding GTPase LB319_08015 PF07715 TonB-dependent Receptor Plug Domain LB319_08015 PF00593 TonB dependent receptor LB319_08020 PF01546 Peptidase family M20/M25/M40 LB319_08020 PF07687 Peptidase dimerisation domain LB319_08035 PF03562 MltA specific insert domain LB319_08035 PF06725 3D domain LB319_08050 PF02556 Preprotein translocase subunit SecB LB319_08055 PF03023 Lipid II flippase MurJ LB319_08060 PF00579 tRNA synthetases class I (W and Y) LB319_08075 PF03702 Anhydro-N-acetylmuramic acid kinase LB319_08080 PF00579 tRNA synthetases class I (W and Y) LB319_08085 PF00271 Helicase conserved C-terminal domain LB319_08085 PF00270 DEAD/DEAH box helicase LB319_08085 PF17191 RecG wedge domain LB319_08090 PF00270 DEAD/DEAH box helicase LB319_08090 PF17757 UvrB interaction domain LB319_08090 PF03461 TRCF domain LB319_08090 PF02559 CarD-like/TRCF domain LB319_08090 PF00271 Helicase conserved C-terminal domain LB319_08100 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LB319_08105 PF03167 Uracil DNA glycosylase superfamily LB319_08110 PF08450 SMP-30/Gluconolactonase/LRE-like region LB319_08115 PF00144 Beta-lactamase LB319_08120 PF00391 PEP-utilising enzyme, mobile domain LB319_08120 PF05524 PEP-utilising enzyme, N-terminal LB319_08120 PF02896 PEP-utilising enzyme, TIM barrel domain LB319_08125 PF03060 Nitronate monooxygenase LB319_08130 PF13840 ACT domain LB319_08130 PF00696 Amino acid kinase family LB319_08130 PF01842 ACT domain LB319_08135 PF08241 Methyltransferase domain LB319_08155 PF01171 PP-loop family LB319_08160 PF01434 Peptidase family M41 LB319_08160 PF17862 AAA+ lid domain LB319_08160 PF00004 ATPase family associated with various cellular activities (AAA) LB319_08170 PF00171 Aldehyde dehydrogenase family LB319_08175 PF01467 Cytidylyltransferase-like LB319_08185 PF02590 Predicted SPOUT methyltransferase LB319_08195 PF03572 Peptidase family S41 LB319_08195 PF13180 PDZ domain LB319_08205 PF03232 Ubiquinone biosynthesis protein COQ7 LB319_08225 PF00248 Aldo/keto reductase family LB319_08240 PF14815 NUDIX domain LB319_08240 PF00730 HhH-GPD superfamily base excision DNA repair protein LB319_08245 PF01842 ACT domain LB319_08245 PF00800 Prephenate dehydratase LB319_08260 PF06826 Predicted Permease Membrane Region LB319_08260 PF02080 TrkA-C domain LB319_08265 PF00155 Aminotransferase class I and II LB319_08270 PF17763 Glutaminase/Asparaginase C-terminal domain LB319_08270 PF00710 Asparaginase, N-terminal LB319_08280 PF01842 ACT domain LB319_08280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LB319_08280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LB319_08285 PF13393 Histidyl-tRNA synthetase LB319_08290 PF00709 Adenylosuccinate synthetase LB319_08300 PF01979 Amidohydrolase family LB319_08305 PF00684 DnaJ central domain LB319_08305 PF01556 DnaJ C terminal domain LB319_08305 PF00226 DnaJ domain LB319_08310 PF03631 Virulence factor BrkB LB319_08320 PF01264 Chorismate synthase LB319_08340 PF01638 HxlR-like helix-turn-helix LB319_08345 PF00925 GTP cyclohydrolase II LB319_08350 PF03372 Endonuclease/Exonuclease/phosphatase family LB319_08360 PF03548 Outer membrane lipoprotein carrier protein LolA LB319_08365 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LB319_08365 PF09397 Ftsk gamma domain LB319_08365 PF01580 FtsK/SpoIIIE family LB319_08365 PF17854 FtsK alpha domain LB319_08370 PF01494 FAD binding domain LB319_08375 PF05362 Lon protease (S16) C-terminal proteolytic domain LB319_08375 PF00004 ATPase family associated with various cellular activities (AAA) LB319_08375 PF02190 ATP-dependent protease La (LON) substrate-binding domain LB319_08385 PF00156 Phosphoribosyl transferase domain LB319_08390 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LB319_08395 PF01648 4'-phosphopantetheinyl transferase superfamily LB319_08400 PF10502 Signal peptidase, peptidase S26 LB319_08405 PF01594 AI-2E family transporter LB319_08410 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LB319_08410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LB319_08415 PF01165 Ribosomal protein S21 LB319_08420 PF02472 Biopolymer transport protein ExbD/TolR LB319_08425 PF02472 Biopolymer transport protein ExbD/TolR LB319_08430 PF01618 MotA/TolQ/ExbB proton channel family LB319_08445 PF00480 ROK family LB319_08450 PF01192 RNA polymerase Rpb6 LB319_08460 PF00107 Zinc-binding dehydrogenase LB319_08460 PF08240 Alcohol dehydrogenase GroES-like domain LB319_08465 PF02578 Multi-copper polyphenol oxidoreductase laccase LB319_08475 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LB319_08480 PF02617 ATP-dependent Clp protease adaptor protein ClpS LB319_08485 PF00155 Aminotransferase class I and II LB319_08500 PF00132 Bacterial transferase hexapeptide (six repeats) LB319_08505 PF00578 AhpC/TSA family LB319_08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_08510 PF03466 LysR substrate binding domain LB319_08525 PF04397 LytTr DNA-binding domain LB319_08525 PF00072 Response regulator receiver domain LB319_08530 PF06580 Histidine kinase LB319_08530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB319_08530 PF07694 5TMR of 5TMR-LYT LB319_08540 PF06421 GTP-binding protein LepA C-terminus LB319_08540 PF03144 Elongation factor Tu domain 2 LB319_08540 PF00009 Elongation factor Tu GTP binding domain LB319_08540 PF00679 Elongation factor G C-terminus LB319_08550 PF02310 B12 binding domain LB319_08550 PF00809 Pterin binding enzyme LB319_08550 PF02574 Homocysteine S-methyltransferase LB319_08550 PF02965 Vitamin B12 dependent methionine synthase, activation domain LB319_08550 PF02607 B12 binding domain LB319_08555 PF02310 B12 binding domain LB319_08555 PF02607 B12 binding domain LB319_08555 PF02965 Vitamin B12 dependent methionine synthase, activation domain LB319_08555 PF00809 Pterin binding enzyme LB319_08555 PF02574 Homocysteine S-methyltransferase LB319_08560 PF02219 Methylenetetrahydrofolate reductase LB319_08565 PF01022 Bacterial regulatory protein, arsR family LB319_08570 PF04333 MlaA lipoprotein LB319_08590 PF00175 Oxidoreductase NAD-binding domain LB319_08590 PF00970 Oxidoreductase FAD-binding domain LB319_08595 PF00171 Aldehyde dehydrogenase family LB319_08600 PF00303 Thymidylate synthase LB319_08605 PF02447 GntP family permease LB319_08615 PF13525 Outer membrane lipoprotein LB319_08630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LB319_08635 PF02021 Uncharacterised protein family UPF0102 LB319_08645 PF03734 L,D-transpeptidase catalytic domain LB319_08645 PF01471 Putative peptidoglycan binding domain LB319_08650 PF01544 CorA-like Mg2+ transporter protein LB319_08655 PF00483 Nucleotidyl transferase LB319_08660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LB319_08660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LB319_08670 PF14698 Argininosuccinate lyase C-terminal LB319_08670 PF00206 Lyase LB319_08675 PF00465 Iron-containing alcohol dehydrogenase LB319_08680 PF02801 Beta-ketoacyl synthase, C-terminal domain LB319_08680 PF08240 Alcohol dehydrogenase GroES-like domain LB319_08680 PF00698 Acyl transferase domain LB319_08680 PF08659 KR domain LB319_08680 PF00550 Phosphopantetheine attachment site LB319_08680 PF14765 Polyketide synthase dehydratase LB319_08680 PF16197 Ketoacyl-synthetase C-terminal extension LB319_08680 PF00109 Beta-ketoacyl synthase, N-terminal domain LB319_08685 PF00248 Aldo/keto reductase family LB319_08700 PF01433 Peptidase family M1 domain LB319_08725 PF00924 Mechanosensitive ion channel LB319_08760 PF00664 ABC transporter transmembrane region LB319_08760 PF00005 ABC transporter LB319_08765 PF00920 Dehydratase family LB319_08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_08770 PF03466 LysR substrate binding domain LB319_08785 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LB319_08790 PF02224 Cytidylate kinase LB319_08795 PF00575 S1 RNA binding domain LB319_08800 PF02567 Phenazine biosynthesis-like protein LB319_08805 PF00216 Bacterial DNA-binding protein LB319_08815 PF13520 Amino acid permease LB319_08820 PF13419 Haloacid dehalogenase-like hydrolase LB319_08825 PF12464 Maltose acetyltransferase LB319_08825 PF14602 Hexapeptide repeat of succinyl-transferase LB319_08835 PF03658 RnfH family Ubiquitin LB319_08840 PF02508 Rnf-Nqr subunit, membrane protein LB319_08845 PF04205 FMN-binding domain LB319_08850 PF03116 NQR2, RnfD, RnfE family LB319_08855 PF10531 SLBB domain LB319_08855 PF13375 RnfC Barrel sandwich hybrid domain LB319_08855 PF13237 4Fe-4S dicluster domain LB319_08855 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LB319_08860 PF04060 Putative Fe-S cluster LB319_08865 PF02508 Rnf-Nqr subunit, membrane protein LB319_08875 PF01590 GAF domain LB319_08875 PF02954 Bacterial regulatory protein, Fis family LB319_08875 PF00158 Sigma-54 interaction domain LB319_08880 PF04055 Radical SAM superfamily LB319_08880 PF02579 Dinitrogenase iron-molybdenum cofactor LB319_08885 PF12838 4Fe-4S dicluster domain LB319_08890 PF04319 NifZ domain LB319_08895 PF06988 NifT/FixU protein LB319_08905 PF00593 TonB dependent receptor LB319_08905 PF07715 TonB-dependent Receptor Plug Domain LB319_08910 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family LB319_08915 PF00148 Nitrogenase component 1 type Oxidoreductase LB319_08920 PF11844 Domain of unknown function (DUF3364) LB319_08920 PF00148 Nitrogenase component 1 type Oxidoreductase LB319_08925 PF00148 Nitrogenase component 1 type Oxidoreductase LB319_08930 PF00148 Nitrogenase component 1 type Oxidoreductase LB319_08935 PF02579 Dinitrogenase iron-molybdenum cofactor LB319_08940 PF03270 Protein of unknown function, DUF269 LB319_08945 PF13237 4Fe-4S dicluster domain LB319_08950 PF04891 NifQ LB319_08955 PF01521 Iron-sulphur cluster biosynthesis LB319_08965 PF00266 Aminotransferase class-V LB319_08970 PF00682 HMGL-like LB319_08975 PF03206 Nitrogen fixation protein NifW LB319_08980 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LB319_08980 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LB319_08985 PF03459 TOBE domain LB319_09005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LB319_09005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LB319_09010 PF03831 PhnA domain LB319_09010 PF08274 PhnA Zinc-Ribbon LB319_09015 PF00005 ABC transporter LB319_09020 PF01032 FecCD transport family LB319_09040 PF00258 Flavodoxin LB319_09045 PF00701 Dihydrodipicolinate synthetase family LB319_09050 PF00392 Bacterial regulatory proteins, gntR family LB319_09050 PF00155 Aminotransferase class I and II LB319_09055 PF00117 Glutamine amidotransferase class-I LB319_09060 PF07690 Major Facilitator Superfamily LB319_09065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_09065 PF03466 LysR substrate binding domain LB319_09130 PF02661 Fic/DOC family LB319_09155 PF00005 ABC transporter LB319_09155 PF13732 Domain of unknown function (DUF4162) LB319_09160 PF00005 ABC transporter LB319_09160 PF00664 ABC transporter transmembrane region LB319_09165 PF04954 Siderophore-interacting protein LB319_09165 PF08021 Siderophore-interacting FAD-binding domain LB319_09165 PF00005 ABC transporter LB319_09165 PF00664 ABC transporter transmembrane region LB319_09175 PF12833 Helix-turn-helix domain LB319_09185 PF07015 VirC1 protein LB319_09195 PF07715 TonB-dependent Receptor Plug Domain LB319_09195 PF00593 TonB dependent receptor LB319_09200 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LB319_09240 PF00135 Carboxylesterase family LB319_09285 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) LB319_09310 PF13614 AAA domain LB319_09480 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LB319_09485 PF04221 RelB antitoxin LB319_09505 PF00375 Sodium:dicarboxylate symporter family LB319_09510 PF01546 Peptidase family M20/M25/M40 LB319_09515 PF00266 Aminotransferase class-V LB319_09530 PF01425 Amidase LB319_09550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LB319_09550 PF03466 LysR substrate binding domain LB319_09555 PF07690 Major Facilitator Superfamily LB319_09560 PF08240 Alcohol dehydrogenase GroES-like domain LB319_09560 PF00107 Zinc-binding dehydrogenase LB319_09570 PF00248 Aldo/keto reductase family LB319_09575 PF00248 Aldo/keto reductase family LB319_09585 PF13340 Putative transposase of IS4/5 family (DUF4096) LB319_09660 PF02661 Fic/DOC family LB319_09680 PF13614 AAA domain LB319_09715 PF04851 Type III restriction enzyme, res subunit LB319_09715 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LB319_09715 PF00271 Helicase conserved C-terminal domain LB319_09715 PF08463 EcoEI R protein C-terminal LB319_09720 PF02384 N-6 DNA Methylase LB319_09725 PF01420 Type I restriction modification DNA specificity domain LB319_09740 PF04471 Restriction endonuclease LB319_09740 PF14338 Mrr N-terminal domain LB319_09745 PF13289 SIR2-like domain LB319_09760 PF13614 AAA domain LB319_09770 PF07715 TonB-dependent Receptor Plug Domain LB319_09770 PF00593 TonB dependent receptor LB319_09785 PF12728 Helix-turn-helix domain LB319_09825 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system