A254_00001 PF00308 Bacterial dnaA protein A254_00001 PF08299 Bacterial dnaA protein helix-turn-helix A254_00001 PF11638 DnaA N-terminal domain A254_00002 PF00005 ABC transporter A254_00002 PF12848 ABC transporter A254_00003 PF00691 OmpA family A254_00004 PF03928 Domain of unknown function (DUF336) A254_00005 PF01027 Inhibitor of apoptosis-promoting Bax1 A254_00006 PF01738 Dienelactone hydrolase family A254_00007 PF00994 Probable molybdopterin binding domain A254_00008 PF00557 Metallopeptidase family M24 A254_00009 PF01212 Beta-eliminating lyase A254_00010 PF00892 EamA-like transporter family A254_00011 PF01433 Peptidase family M1 A254_00011 PF11940 Domain of unknown function (DUF3458) A254_00011 PF17432 A254_00011 A254_00012 PF00248 Aldo/keto reductase family A254_00014 PF04228 A254_00014 A254_00015 PF05977 Transmembrane secretion effector A254_00016 PF01810 A254_00016 A254_00017 PF02678 Pirin A254_00018 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_00018 PF03466 LysR substrate binding domain A254_00019 PF03358 NADPH-dependent FMN reductase A254_00020 PF04264 YceI-like domain A254_00021 PF00924 Mechanosensitive ion channel A254_00022 PF01513 ATP-NAD kinase A254_00023 PF00588 SpoU rRNA Methylase family A254_00023 PF08032 RNA 2'-O ribose methyltransferase substrate binding A254_00024 PF00381 PTS HPr component phosphorylation site A254_00025 PF03610 PTS system fructose IIA component A254_00026 PF03668 A254_00026 A254_00027 PF07475 HPr Serine kinase C-terminal domain A254_00028 PF00512 His Kinase A (phospho-acceptor) domain A254_00028 PF00672 HAMP domain A254_00028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00029 PF00072 Response regulator receiver domain A254_00029 PF00486 Transcriptional regulatory protein, C terminal A254_00030 PF00478 IMP dehydrogenase / GMP reductase domain A254_00030 PF00571 CBS domain A254_00031 PF01189 NOL1/NOP2/sun family A254_00034 PF02223 Thymidylate kinase A254_00035 PF13440 A254_00035 A254_00037 PF00398 Ribosomal RNA adenine dimethylase A254_00038 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A254_00039 PF00639 PPIC-type PPIASE domain A254_00039 PF13624 SurA N-terminal domain A254_00040 PF03968 OstA-like protein A254_00040 PF04453 Organic solvent tolerance protein A254_00041 PF00883 Cytosol aminopeptidase family, catalytic domain A254_00041 PF02789 Cytosol aminopeptidase family, N-terminal domain A254_00042 PF04364 DNA polymerase III chi subunit, HolC A254_00043 PF05681 A254_00043 A254_00043 PF05683 Fumarase C-terminus A254_00044 PF01728 FtsJ-like methyltransferase A254_00045 PF04380 A254_00045 A254_00046 PF10722 Putative bacterial sensory transduction regulator A254_00047 PF03807 NADP oxidoreductase coenzyme F420-dependent A254_00047 PF14748 Pyrroline-5-carboxylate reductase dimerisation A254_00048 PF03099 Biotin/lipoate A/B protein ligase family A254_00049 PF00593 TonB dependent receptor A254_00049 PF07715 TonB-dependent Receptor Plug Domain A254_00051 PF13394 4Fe-4S single cluster domain A254_00052 PF01380 SIS domain A254_00054 PF00450 Serine carboxypeptidase A254_00055 PF04226 A254_00055 A254_00056 PF07690 Major Facilitator Superfamily A254_00057 PF12318 A254_00057 A254_00058 PF00732 GMC oxidoreductase A254_00058 PF00890 FAD binding domain A254_00058 PF05199 GMC oxidoreductase A254_00059 PF00034 Cytochrome c A254_00059 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A254_00060 PF00356 Bacterial regulatory proteins, lacI family A254_00060 PF13377 Periplasmic binding protein-like domain A254_00061 PF00550 Phosphopantetheine attachment site A254_00062 PF00109 Beta-ketoacyl synthase, N-terminal domain A254_00062 PF02801 Beta-ketoacyl synthase, C-terminal domain A254_00063 PF02618 YceG-like family A254_00065 PF00291 Pyridoxal-phosphate dependent enzyme A254_00066 PF07969 Amidohydrolase family A254_00067 PF00171 Aldehyde dehydrogenase family A254_00068 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A254_00069 PF00155 Aminotransferase class I and II A254_00070 PF00550 Phosphopantetheine attachment site A254_00072 PF00117 Glutamine amidotransferase class-I A254_00072 PF00958 GMP synthase C terminal domain A254_00072 PF02540 NAD synthase A254_00073 PF08901 A254_00073 A254_00074 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A254_00074 PF13378 Enolase C-terminal domain-like A254_00075 PF00005 ABC transporter A254_00076 PF00528 Binding-protein-dependent transport system inner membrane component A254_00077 PF09084 NMT1/THI5 like A254_00078 PF00593 TonB dependent receptor A254_00078 PF07715 TonB-dependent Receptor Plug Domain A254_00079 PF01578 A254_00079 A254_00081 PF03100 CcmE A254_00082 PF01578 A254_00082 A254_00082 PF16327 A254_00082 A254_00083 PF08534 Redoxin A254_00084 PF03918 Cytochrome C biogenesis protein A254_00086 PF12276 A254_00086 A254_00087 PF12276 A254_00087 A254_00088 PF12276 A254_00088 A254_00089 PF00444 Ribosomal protein L36 A254_00090 PF13590 Domain of unknown function (DUF4136) A254_00091 PF00246 Zinc carboxypeptidase A254_00092 PF00300 Histidine phosphatase superfamily (branch 1) A254_00093 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A254_00093 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A254_00094 PF00107 Zinc-binding dehydrogenase A254_00094 PF08240 Alcohol dehydrogenase GroES-like domain A254_00095 PF01475 Ferric uptake regulator family A254_00096 PF02779 Transketolase, pyrimidine binding domain A254_00096 PF02780 Transketolase, C-terminal domain A254_00096 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A254_00097 PF00483 Nucleotidyl transferase A254_00097 PF01050 Mannose-6-phosphate isomerase A254_00098 PF00534 Glycosyl transferases group 1 A254_00099 PF01061 A254_00099 A254_00100 PF00534 Glycosyl transferases group 1 A254_00100 PF13439 Glycosyltransferase Family 4 A254_00101 PF13181 Tetratricopeptide repeat A254_00102 PF01370 NAD dependent epimerase/dehydratase family A254_00103 PF16363 A254_00103 A254_00105 PF01368 DHH family A254_00105 PF02272 DHHA1 domain A254_00106 PF01227 GTP cyclohydrolase I A254_00107 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A254_00107 PF13378 Enolase C-terminal domain-like A254_00108 PF01281 Ribosomal protein L9, N-terminal domain A254_00108 PF03948 Ribosomal protein L9, C-terminal domain A254_00109 PF01084 Ribosomal protein S18 A254_00110 PF01250 Ribosomal protein S6 A254_00111 PF00698 Acyl transferase domain A254_00112 PF13561 Enoyl-(Acyl carrier protein) reductase A254_00114 PF02416 mttA/Hcf106 family A254_00115 PF02416 mttA/Hcf106 family A254_00116 PF00902 Sec-independent protein translocase protein (TatC) A254_00118 PF07568 A254_00118 A254_00120 PF00270 DEAD/DEAH box helicase A254_00120 PF00271 Helicase conserved C-terminal domain A254_00122 PF00342 Phosphoglucose isomerase A254_00123 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A254_00123 PF07992 Pyridine nucleotide-disulphide oxidoreductase A254_00125 PF02705 A254_00125 A254_00127 PF00795 Carbon-nitrogen hydrolase A254_00128 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_00128 PF03466 LysR substrate binding domain A254_00131 PF00588 SpoU rRNA Methylase family A254_00132 PF03477 ATP cone domain A254_00133 PF00464 Serine hydroxymethyltransferase A254_00134 PF02502 Ribose/Galactose Isomerase A254_00135 PF00155 Aminotransferase class I and II A254_00136 PF01177 Asp/Glu/Hydantoin racemase A254_00137 PF07690 Major Facilitator Superfamily A254_00138 PF02660 A254_00138 A254_00139 PF02481 DNA recombination-mediator protein A A254_00140 PF01131 DNA topoisomerase A254_00140 PF01396 A254_00140 A254_00140 PF01751 Toprim domain A254_00140 PF13368 A254_00140 A254_00141 PF00899 ThiF family A254_00142 PF00692 dUTPase A254_00143 PF02441 Flavoprotein A254_00143 PF04127 DNA / pantothenate metabolism flavoprotein A254_00144 PF03109 A254_00144 A254_00145 PF01209 ubiE/COQ5 methyltransferase family A254_00147 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A254_00147 PF06827 Zinc finger found in FPG and IleRS A254_00147 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A254_00148 PF01464 Transglycosylase SLT domain A254_00149 PF03167 Uracil DNA glycosylase superfamily A254_00150 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase A254_00150 PF13450 NAD(P)-binding Rossmann-like domain A254_00151 PF13432 Tetratricopeptide repeat A254_00152 PF00288 GHMP kinases N terminal domain A254_00152 PF08544 GHMP kinases C terminal A254_00153 PF05013 N-formylglutamate amidohydrolase A254_00154 PF01256 Carbohydrate kinase A254_00154 PF03853 YjeF-related protein N-terminus A254_00155 PF05958 tRNA (Uracil-5-)-methyltransferase A254_00156 PF01502 Phosphoribosyl-AMP cyclohydrolase A254_00157 PF00072 Response regulator receiver domain A254_00157 PF00486 Transcriptional regulatory protein, C terminal A254_00158 PF00512 His Kinase A (phospho-acceptor) domain A254_00158 PF00672 HAMP domain A254_00158 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00159 PF01103 Surface antigen A254_00160 PF04357 A254_00160 A254_00161 PF04996 Succinylarginine dihydrolase A254_00162 PF00933 Glycosyl hydrolase family 3 N terminal domain A254_00163 PF03992 Antibiotic biosynthesis monooxygenase A254_00164 PF01869 BadF/BadG/BcrA/BcrD ATPase family A254_00165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) A254_00165 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain A254_00166 PF00154 recA bacterial DNA recombination protein A254_00168 PF00072 Response regulator receiver domain A254_00168 PF00486 Transcriptional regulatory protein, C terminal A254_00169 PF01895 PhoU domain A254_00170 PF00512 His Kinase A (phospho-acceptor) domain A254_00170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00171 PF02666 A254_00171 A254_00172 PF01066 CDP-alcohol phosphatidyltransferase A254_00172 PF08009 A254_00172 A254_00173 PF01177 Asp/Glu/Hydantoin racemase A254_00175 PF00318 Ribosomal protein S2 A254_00176 PF00889 Elongation factor TS A254_00177 PF00696 Amino acid kinase family A254_00178 PF01765 Ribosome recycling factor A254_00179 PF01255 Putative undecaprenyl diphosphate synthase A254_00180 PF01148 Cytidylyltransferase family A254_00181 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A254_00181 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal A254_00181 PF13288 DXP reductoisomerase C-terminal domain A254_00182 PF02163 Peptidase family M50 A254_00182 PF13180 PDZ domain A254_00183 PF01103 Surface antigen A254_00183 PF07244 Surface antigen variable number repeat A254_00184 PF03938 Outer membrane protein (OmpH-like) A254_00185 PF07977 FabA-like domain A254_00186 PF01197 Ribosomal protein L31 A254_00188 PF00302 Chloramphenicol acetyltransferase A254_00189 PF07992 Pyridine nucleotide-disulphide oxidoreductase A254_00190 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A254_00190 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain A254_00191 PF10369 Small subunit of acetolactate synthase A254_00191 PF13710 ACT domain A254_00192 PF00205 Thiamine pyrophosphate enzyme, central domain A254_00192 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A254_00192 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A254_00193 PF01715 IPP transferase A254_00194 PF12710 haloacid dehalogenase-like hydrolase A254_00195 PF00034 Cytochrome c A254_00195 PF03150 Di-haem cytochrome c peroxidase A254_00195 PF14376 A254_00195 A254_00196 PF01523 Putative modulator of DNA gyrase A254_00198 PF00484 Carbonic anhydrase A254_00199 PF04055 Radical SAM superfamily A254_00199 PF16881 A254_00199 A254_00200 PF03364 Polyketide cyclase / dehydrase and lipid transport A254_00201 PF02464 Competence-damaged protein A254_00203 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A254_00203 PF02542 YgbB family A254_00204 PF01207 Dihydrouridine synthase (Dus) A254_00205 PF02954 Bacterial regulatory protein, Fis family A254_00206 PF00512 His Kinase A (phospho-acceptor) domain A254_00206 PF00672 HAMP domain A254_00206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00207 PF00072 Response regulator receiver domain A254_00207 PF00158 Sigma-54 interaction domain A254_00207 PF02954 Bacterial regulatory protein, Fis family A254_00209 PF00216 Bacterial DNA-binding protein A254_00210 PF13411 MerR HTH family regulatory protein A254_00211 PF00043 Glutathione S-transferase, C-terminal domain A254_00211 PF13417 Glutathione S-transferase, N-terminal domain A254_00212 PF00310 Glutamine amidotransferases class-II A254_00212 PF01493 GXGXG motif A254_00212 PF01645 Conserved region in glutamate synthase A254_00212 PF04898 Glutamate synthase central domain A254_00213 PF07992 Pyridine nucleotide-disulphide oxidoreductase A254_00213 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A254_00214 PF02673 A254_00214 A254_00216 PF03167 Uracil DNA glycosylase superfamily A254_00217 PF07992 Pyridine nucleotide-disulphide oxidoreductase A254_00218 PF04279 A254_00218 A254_00219 PF07690 Major Facilitator Superfamily A254_00221 PF01037 AsnC family A254_00221 PF13412 Winged helix-turn-helix DNA-binding A254_00222 PF00512 His Kinase A (phospho-acceptor) domain A254_00224 PF00512 His Kinase A (phospho-acceptor) domain A254_00224 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00224 PF12860 A254_00224 A254_00225 PF02367 Uncharacterised P-loop hydrolase UPF0079 A254_00226 PF00483 Nucleotidyl transferase A254_00227 PF12705 PD-(D/E)XK nuclease superfamily A254_00228 PF00580 UvrD/REP helicase N-terminal domain A254_00228 PF12705 PD-(D/E)XK nuclease superfamily A254_00228 PF13361 UvrD-like helicase C-terminal domain A254_00229 PF00085 Thioredoxin A254_00230 PF00575 S1 RNA binding domain A254_00230 PF00773 RNB domain A254_00231 PF03819 MazG nucleotide pyrophosphohydrolase domain A254_00232 PF12706 Beta-lactamase superfamily domain A254_00233 PF01026 TatD related DNase A254_00234 PF09334 tRNA synthetases class I (M) A254_00235 PF13177 DNA polymerase III, delta subunit A254_00236 PF02223 Thymidylate kinase A254_00237 PF00768 D-alanyl-D-alanine carboxypeptidase A254_00237 PF07943 Penicillin-binding protein 5, C-terminal domain A254_00238 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel A254_00239 PF13406 Transglycosylase SLT domain A254_00240 PF01270 Glycosyl hydrolases family 8 A254_00241 PF05420 A254_00241 A254_00241 PF13432 Tetratricopeptide repeat A254_00241 PF14559 Tetratricopeptide repeat A254_00244 PF00535 Glycosyl transferase family 2 A254_00244 PF03552 Cellulose synthase A254_00244 PF07238 PilZ domain A254_00245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A254_00247 PF01245 Ribosomal protein L19 A254_00248 PF01746 tRNA (Guanine-1)-methyltransferase A254_00249 PF01782 RimM N-terminal domain A254_00249 PF05239 PRC-barrel domain A254_00250 PF00886 Ribosomal protein S16 A254_00251 PF00448 SRP54-type protein, GTPase domain A254_00251 PF02881 SRP54-type protein, helical bundle domain A254_00251 PF02978 Signal peptide binding domain A254_00252 PF01678 Diaminopimelate epimerase A254_00253 PF00919 Uncharacterized protein family UPF0004 A254_00253 PF04055 Radical SAM superfamily A254_00254 PF00448 SRP54-type protein, GTPase domain A254_00254 PF02881 SRP54-type protein, helical bundle domain A254_00256 PF00226 DnaJ domain A254_00258 PF02657 Fe-S metabolism associated domain A254_00260 PF04024 A254_00260 A254_00261 PF06667 A254_00261 A254_00262 PF04012 A254_00262 A254_00263 PF03544 Gram-negative bacterial TonB protein C-terminal A254_00264 PF00158 Sigma-54 interaction domain A254_00265 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A254_00265 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A254_00266 PF02152 Dihydroneopterin aldolase A254_00267 PF13527 Acetyltransferase (GNAT) domain A254_00268 PF01743 Poly A polymerase head domain A254_00268 PF12627 Probable RNA and SrmB- binding site of polymerase A A254_00269 PF00563 EAL domain A254_00269 PF00990 GGDEF domain A254_00270 PF00521 DNA gyrase/topoisomerase IV, subunit A A254_00270 PF03989 DNA gyrase C-terminal domain, beta-propeller A254_00271 PF01259 SAICAR synthetase A254_00272 PF00005 ABC transporter A254_00273 PF00528 Binding-protein-dependent transport system inner membrane component A254_00274 PF00528 Binding-protein-dependent transport system inner membrane component A254_00275 PF12849 PBP superfamily domain A254_00277 PF01741 Large-conductance mechanosensitive channel, MscL A254_00278 PF04011 LemA family A254_00279 PF04536 TLP18 A254_00280 PF00293 NUDIX domain A254_00282 PF00593 TonB dependent receptor A254_00282 PF07715 TonB-dependent Receptor Plug Domain A254_00283 PF00317 Ribonucleotide reductase, all-alpha domain A254_00283 PF02867 Ribonucleotide reductase, barrel domain A254_00285 PF00764 Arginosuccinate synthase A254_00286 PF13202 EF hand A254_00287 PF02353 Mycolic acid cyclopropane synthetase A254_00288 PF04055 Radical SAM superfamily A254_00289 PF12730 A254_00289 A254_00290 PF00005 ABC transporter A254_00291 PF04055 Radical SAM superfamily A254_00291 PF13353 4Fe-4S single cluster domain A254_00292 PF13597 Anaerobic ribonucleoside-triphosphate reductase A254_00293 PF03477 ATP cone domain A254_00293 PF13597 Anaerobic ribonucleoside-triphosphate reductase A254_00294 PF06508 Queuosine biosynthesis protein QueC A254_00295 PF00266 Aminotransferase class-V A254_00296 PF02129 X-Pro dipeptidyl-peptidase (S15 family) A254_00297 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A254_00297 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A254_00298 PF01916 Deoxyhypusine synthase A254_00299 PF02405 A254_00299 A254_00300 PF00005 ABC transporter A254_00301 PF02470 A254_00301 A254_00302 PF03886 Protein of unknown function (DUF330) A254_00303 PF01176 Translation initiation factor 1A / IF-1 A254_00304 PF02545 Maf-like protein A254_00307 PF13811 A254_00307 A254_00308 PF07277 A254_00308 A254_00309 PF01565 FAD binding domain A254_00309 PF02913 FAD linked oxidases, C-terminal domain A254_00310 PF01062 A254_00310 A254_00311 PF00809 Pterin binding enzyme A254_00312 PF01555 DNA methylase A254_00313 PF01351 Ribonuclease HII A254_00314 PF08543 Phosphomethylpyrimidine kinase A254_00315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A254_00315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A254_00315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A254_00315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A254_00316 PF00854 POT family A254_00317 PF01717 Cobalamin-independent synthase, Catalytic domain A254_00317 PF08267 Cobalamin-independent synthase, N-terminal domain A254_00318 PF01300 Telomere recombination A254_00318 PF03481 Putative GTP-binding controlling metal-binding A254_00319 PF01625 Peptide methionine sulfoxide reductase A254_00320 PF01081 KDPG and KHG aldolase A254_00321 PF00924 Mechanosensitive ion channel A254_00323 PF00450 Serine carboxypeptidase A254_00324 PF00011 Hsp20/alpha crystallin family A254_00325 PF04325 Protein of unknown function (DUF465) A254_00326 PF04325 Protein of unknown function (DUF465) A254_00327 PF01258 Prokaryotic dksA/traR C4-type zinc finger A254_00328 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A254_00328 PF02403 Seryl-tRNA synthetase N-terminal domain A254_00329 PF01975 Survival protein SurE A254_00330 PF01476 LysM domain A254_00330 PF01551 Peptidase family M23 A254_00331 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A254_00331 PF00528 Binding-protein-dependent transport system inner membrane component A254_00332 PF00528 Binding-protein-dependent transport system inner membrane component A254_00333 PF00005 ABC transporter A254_00334 PF00712 DNA polymerase III beta subunit, N-terminal domain A254_00334 PF02767 DNA polymerase III beta subunit, central domain A254_00334 PF02768 DNA polymerase III beta subunit, C-terminal domain A254_00335 PF00593 TonB dependent receptor A254_00335 PF07715 TonB-dependent Receptor Plug Domain A254_00336 PF01497 Periplasmic binding protein A254_00337 PF00248 Aldo/keto reductase family A254_00339 PF03706 A254_00339 A254_00340 PF04794 YdjC-like protein A254_00341 PF04055 Radical SAM superfamily A254_00342 PF13506 Glycosyl transferase family 21 A254_00343 PF00962 Adenosine/AMP deaminase A254_00344 PF06516 A254_00344 A254_00345 PF00860 Permease family A254_00347 PF01773 Na+ dependent nucleoside transporter N-terminus A254_00347 PF07662 Na+ dependent nucleoside transporter C-terminus A254_00347 PF07670 Nucleoside recognition A254_00348 PF07690 Major Facilitator Superfamily A254_00349 PF13437 HlyD family secretion protein A254_00349 PF13533 Biotin-lipoyl like A254_00350 PF02321 Outer membrane efflux protein A254_00351 PF00440 Bacterial regulatory proteins, tetR family A254_00351 PF14246 AefR-like transcriptional repressor, C-terminal region A254_00352 PF01979 Amidohydrolase family A254_00353 PF00034 Cytochrome c A254_00354 PF00912 Transglycosylase A254_00355 PF02167 Cytochrome C1 family A254_00356 PF00032 Cytochrome b(C-terminal)/b6/petD A254_00356 PF00033 Cytochrome b(N-terminal)/b6/petB A254_00357 PF00355 Rieske [2Fe-2S] domain A254_00357 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal A254_00358 PF00588 SpoU rRNA Methylase family A254_00359 PF01218 Coproporphyrinogen III oxidase A254_00360 PF00583 Acetyltransferase (GNAT) family A254_00361 PF06689 ClpX C4-type zinc finger A254_00361 PF07724 AAA domain (Cdc48 subfamily) A254_00361 PF10431 C-terminal, D2-small domain, of ClpB protein A254_00362 PF00574 Clp protease A254_00363 PF00535 Glycosyl transferase family 2 A254_00364 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A254_00364 PF05697 Bacterial trigger factor protein (TF) A254_00364 PF05698 Bacterial trigger factor protein (TF) C-terminus A254_00366 PF01263 Aldose 1-epimerase A254_00368 PF00251 Glycosyl hydrolases family 32 N-terminal domain A254_00368 PF08244 Glycosyl hydrolases family 32 C terminal A254_00370 PF16363 A254_00370 A254_00371 PF12802 MarR family A254_00372 PF01979 Amidohydrolase family A254_00373 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase A254_00374 PF00155 Aminotransferase class I and II A254_00375 PF00892 EamA-like transporter family A254_00376 PF00043 Glutathione S-transferase, C-terminal domain A254_00376 PF13417 Glutathione S-transferase, N-terminal domain A254_00378 PF05838 Glycosyl hydrolase 108 A254_00378 PF09374 Predicted Peptidoglycan domain A254_00381 PF03576 Peptidase family S58 A254_00382 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A254_00383 PF09923 A254_00383 A254_00384 PF02470 A254_00384 A254_00385 PF00313 'Cold-shock' DNA-binding domain A254_00386 PF01043 SecA preprotein cross-linking domain A254_00386 PF02810 SEC-C motif A254_00386 PF07516 SecA Wing and Scaffold domain A254_00386 PF07517 SecA DEAD-like domain A254_00387 PF01960 ArgJ family A254_00388 PF04266 ASCH domain A254_00390 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme A254_00391 PF00990 GGDEF domain A254_00391 PF07494 Two component regulator propeller A254_00391 PF07495 Y_Y_Y domain A254_00392 PF00199 Catalase A254_00392 PF06628 Catalase-related immune-responsive A254_00393 PF03060 Nitronate monooxygenase A254_00395 PF00403 Heavy-metal-associated domain A254_00396 PF00122 E1-E2 ATPase A254_00396 PF00403 Heavy-metal-associated domain A254_00396 PF00702 haloacid dehalogenase-like hydrolase A254_00397 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A254_00397 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A254_00398 PF01063 Aminotransferase class IV A254_00399 PF05960 Bacterial protein of unknown function (DUF885) A254_00400 PF02563 Polysaccharide biosynthesis/export protein A254_00401 PF00005 ABC transporter A254_00402 PF00534 Glycosyl transferases group 1 A254_00405 PF13632 Glycosyl transferase family group 2 A254_00406 PF04349 Periplasmic glucan biosynthesis protein, MdoG A254_00407 PF01301 Glycosyl hydrolases family 35 A254_00407 PF10435 Beta-galactosidase, domain 2 A254_00407 PF13363 Beta-galactosidase, domain 3 A254_00407 PF13364 Beta-galactosidase jelly roll domain A254_00408 PF00682 HMGL-like A254_00408 PF08502 LeuA allosteric (dimerisation) domain A254_00409 PF00593 TonB dependent receptor A254_00409 PF07715 TonB-dependent Receptor Plug Domain A254_00411 PF00749 tRNA synthetases class I (E and Q), catalytic domain A254_00412 PF00795 Carbon-nitrogen hydrolase A254_00412 PF02540 NAD synthase A254_00416 PF08378 A254_00416 A254_00417 PF00144 Beta-lactamase A254_00418 PF13307 Helicase C-terminal domain A254_00419 PF01921 tRNA synthetases class I (K) A254_00420 PF01263 Aldose 1-epimerase A254_00421 PF00239 Resolvase, N terminal domain A254_00421 PF02796 Helix-turn-helix domain of resolvase A254_00422 PF02643 Uncharacterized ACR, COG1430 A254_00423 PF03203 A254_00423 A254_00424 PF00572 Ribosomal protein L13 A254_00425 PF00380 Ribosomal protein S9/S16 A254_00426 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A254_00426 PF11563 Protoglobin A254_00427 PF01584 CheW-like domain A254_00427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00428 PF00072 Response regulator receiver domain A254_00428 PF01339 CheB methylesterase A254_00430 PF05494 Toluene tolerance, Ttg2 A254_00431 PF02401 LytB protein A254_00432 PF04055 Radical SAM superfamily A254_00432 PF11946 A254_00432 A254_00432 PF13394 4Fe-4S single cluster domain A254_00433 PF01048 Phosphorylase superfamily A254_00434 PF13243 Prenyltransferase-like A254_00434 PF13249 Prenyltransferase-like A254_00435 PF01593 Flavin containing amine oxidoreductase A254_00436 PF00494 Squalene/phytoene synthase A254_00437 PF00494 Squalene/phytoene synthase A254_00438 PF00535 Glycosyl transferase family 2 A254_00439 PF01370 NAD dependent epimerase/dehydratase family A254_00440 PF01545 Cation efflux family A254_00441 PF00772 DnaB-like helicase N terminal domain A254_00441 PF03796 DnaB-like helicase C terminal domain A254_00442 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A254_00443 PF00692 dUTPase A254_00444 PF02575 YbaB/EbfC DNA-binding family A254_00445 PF12169 DNA polymerase III subunits gamma and tau domain III A254_00445 PF12362 A254_00445 A254_00445 PF13177 DNA polymerase III, delta subunit A254_00446 PF00111 2Fe-2S iron-sulfur cluster binding domain A254_00447 PF00266 Aminotransferase class-V A254_00448 PF06242 A254_00448 A254_00449 PF02609 Exonuclease VII small subunit A254_00450 PF00348 Polyprenyl synthetase A254_00451 PF01467 Cytidylyltransferase A254_00452 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A254_00453 PF02547 Queuosine biosynthesis protein A254_00454 PF01243 Pyridoxamine 5'-phosphate oxidase A254_00454 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A254_00455 PF00158 Sigma-54 interaction domain A254_00455 PF02954 Bacterial regulatory protein, Fis family A254_00456 PF03901 A254_00456 A254_00457 PF04966 Carbohydrate-selective porin, OprB family A254_00458 PF00999 Sodium/hydrogen exchanger family A254_00458 PF02254 TrkA-N domain A254_00459 PF01411 tRNA synthetases class II (A) A254_00459 PF02272 DHHA1 domain A254_00459 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A254_00460 PF05036 Sporulation related domain A254_00461 PF00750 tRNA synthetases class I (R) A254_00461 PF03485 Arginyl tRNA synthetase N terminal domain A254_00461 PF05746 DALR anticodon binding domain A254_00462 PF01966 HD domain A254_00462 PF13286 Phosphohydrolase-associated domain A254_00463 PF00654 Voltage gated chloride channel A254_00464 PF05036 Sporulation related domain A254_00465 PF00091 Tubulin/FtsZ family, GTPase domain A254_00465 PF12327 FtsZ family, C-terminal domain A254_00466 PF02491 SHS2 domain inserted in FTSA A254_00466 PF14450 Cell division protein FtsA A254_00467 PF03799 Cell division protein FtsQ A254_00467 PF08478 POTRA domain, FtsQ-type A254_00468 PF01820 D-ala D-ala ligase N-terminus A254_00468 PF07478 D-ala D-ala ligase C-terminus A254_00469 PF01565 FAD binding domain A254_00469 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A254_00470 PF01225 Mur ligase family, catalytic domain A254_00470 PF02875 Mur ligase family, glutamate ligase domain A254_00470 PF08245 Mur ligase middle domain A254_00471 PF03033 Glycosyltransferase family 28 N-terminal domain A254_00471 PF04101 Glycosyltransferase family 28 C-terminal domain A254_00472 PF01098 A254_00472 A254_00473 PF08245 Mur ligase middle domain A254_00474 PF00953 Glycosyl transferase family 4 A254_00474 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A254_00475 PF01225 Mur ligase family, catalytic domain A254_00475 PF02875 Mur ligase family, glutamate ligase domain A254_00475 PF08245 Mur ligase middle domain A254_00476 PF01225 Mur ligase family, catalytic domain A254_00476 PF02875 Mur ligase family, glutamate ligase domain A254_00476 PF08245 Mur ligase middle domain A254_00477 PF00905 Penicillin binding protein transpeptidase domain A254_00477 PF03717 Penicillin-binding Protein dimerisation domain A254_00479 PF01795 MraW methylase family A254_00481 PF00291 Pyridoxal-phosphate dependent enzyme A254_00482 PF00586 AIR synthase related protein, N-terminal domain A254_00482 PF02769 AIR synthase related protein, C-terminal domain A254_00483 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A254_00483 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A254_00483 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A254_00484 PF01242 6-pyruvoyl tetrahydropterin synthase A254_00486 PF02646 A254_00486 A254_00487 PF01327 Polypeptide deformylase A254_00488 PF02132 RecR protein A254_00488 PF13662 Toprim domain A254_00489 PF00551 Formyl transferase A254_00489 PF02911 Formyl transferase, C-terminal domain A254_00490 PF01416 tRNA pseudouridine synthase A254_00491 PF02594 Uncharacterised ACR, YggU family COG1872 A254_00492 PF00919 Uncharacterized protein family UPF0004 A254_00492 PF04055 Radical SAM superfamily A254_00493 PF00883 Cytosol aminopeptidase family, catalytic domain A254_00494 PF00877 NlpC/P60 family A254_00495 PF01118 Semialdehyde dehydrogenase, NAD binding domain A254_00496 PF05036 Sporulation related domain A254_00497 PF16576 A254_00497 A254_00498 PF00005 ABC transporter A254_00498 PF12698 ABC-2 family transporter protein A254_00499 PF12698 ABC-2 family transporter protein A254_00500 PF02321 Outer membrane efflux protein A254_00501 PF00106 short chain dehydrogenase A254_00503 PF00593 TonB dependent receptor A254_00503 PF07715 TonB-dependent Receptor Plug Domain A254_00504 PF00326 Prolyl oligopeptidase family A254_00504 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A254_00506 PF01979 Amidohydrolase family A254_00507 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A254_00507 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A254_00509 PF00593 TonB dependent receptor A254_00509 PF07715 TonB-dependent Receptor Plug Domain A254_00510 PF00034 Cytochrome c A254_00510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A254_00511 PF00732 GMC oxidoreductase A254_00511 PF05199 GMC oxidoreductase A254_00512 PF12318 A254_00512 A254_00513 PF03652 Uncharacterised protein family (UPF0081) A254_00514 PF02686 Glu-tRNAGln amidotransferase C subunit A254_00515 PF01425 Amidase A254_00516 PF02637 GatB domain A254_00516 PF02934 GatB/GatE catalytic domain A254_00517 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_00517 PF03466 LysR substrate binding domain A254_00518 PF02321 Outer membrane efflux protein A254_00519 PF16576 A254_00519 A254_00520 PF00873 AcrB/AcrD/AcrF family A254_00521 PF00753 Metallo-beta-lactamase superfamily A254_00523 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_00523 PF03466 LysR substrate binding domain A254_00524 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A254_00525 PF00571 CBS domain A254_00525 PF01769 Divalent cation transporter A254_00525 PF03448 MgtE intracellular N domain A254_00526 PF03054 tRNA methyl transferase A254_00529 PF01966 HD domain A254_00529 PF08335 GlnD PII-uridylyltransferase A254_00530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A254_00530 PF02824 TGS domain A254_00530 PF03129 Anticodon binding domain A254_00530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A254_00531 PF00561 alpha/beta hydrolase fold A254_00532 PF13432 Tetratricopeptide repeat A254_00533 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A254_00534 PF00753 Metallo-beta-lactamase superfamily A254_00534 PF16123 A254_00534 A254_00535 PF00857 Isochorismatase family A254_00536 PF13181 Tetratricopeptide repeat A254_00537 PF13174 Tetratricopeptide repeat A254_00537 PF13181 Tetratricopeptide repeat A254_00538 PF02036 SCP-2 sterol transfer family A254_00539 PF00462 Glutaredoxin A254_00540 PF10090 Uncharacterized protein conserved in bacteria (DUF2328) A254_00541 PF14464 Prokaryotic homologs of the JAB domain A254_00542 PF00849 RNA pseudouridylate synthase A254_00543 PF00140 Sigma-70 factor, region 1 A254_00543 PF04542 Sigma-70 region 2 A254_00543 PF04545 Sigma-70, region 4 A254_00544 PF00291 Pyridoxal-phosphate dependent enzyme A254_00546 PF06347 Bacterial SH3 domain A254_00548 PF07080 Protein of unknown function (DUF1348) A254_00549 PF13557 A254_00549 A254_00550 PF00009 Elongation factor Tu GTP binding domain A254_00550 PF03144 Elongation factor Tu domain 2 A254_00550 PF16658 A254_00550 A254_00551 PF05532 CsbD-like A254_00552 PF03992 Antibiotic biosynthesis monooxygenase A254_00553 PF02597 ThiS family A254_00553 PF05690 Thiazole biosynthesis protein ThiG A254_00554 PF01220 Dehydroquinase class II A254_00555 PF00364 Biotin-requiring enzyme A254_00556 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain A254_00556 PF02785 Biotin carboxylase C-terminal domain A254_00556 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A254_00557 PF00459 Inositol monophosphatase family A254_00559 PF00623 RNA polymerase Rpb1, domain 2 A254_00559 PF04983 RNA polymerase Rpb1, domain 3 A254_00559 PF04997 RNA polymerase Rpb1, domain 1 A254_00559 PF04998 RNA polymerase Rpb1, domain 5 A254_00559 PF05000 RNA polymerase Rpb1, domain 4 A254_00560 PF00562 RNA polymerase Rpb2, domain 6 A254_00560 PF04560 RNA polymerase Rpb2, domain 7 A254_00560 PF04561 RNA polymerase Rpb2, domain 2 A254_00560 PF04563 RNA polymerase beta subunit A254_00560 PF04565 RNA polymerase Rpb2, domain 3 A254_00560 PF10385 RNA polymerase beta subunit external 1 domain A254_00561 PF00542 Ribosomal protein L7/L12 C-terminal domain A254_00561 PF16320 A254_00561 A254_00562 PF00466 Ribosomal protein L10 A254_00563 PF00687 Ribosomal protein L1p/L10e family A254_00564 PF00298 Ribosomal protein L11, RNA binding domain A254_00564 PF03946 Ribosomal protein L11, N-terminal domain A254_00565 PF00467 KOW motif A254_00565 PF02357 Transcription termination factor nusG A254_00566 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A254_00568 PF01431 Peptidase family M13 A254_00568 PF05649 Peptidase family M13 A254_00569 PF01668 SmpB protein A254_00570 PF00701 Dihydrodipicolinate synthetase family A254_00571 PF01464 Transglycosylase SLT domain A254_00572 PF01272 Transcription elongation factor, GreA/GreB, C-term A254_00572 PF03449 Transcription elongation factor, N-terminal A254_00573 PF03976 Polyphosphate kinase 2 (PPK2) A254_00574 PF00152 tRNA synthetases class II (D, K and N) A254_00574 PF01336 OB-fold nucleic acid binding domain A254_00574 PF02938 GAD domain A254_00575 PF00570 HRDC domain A254_00575 PF01612 3'-5' exonuclease A254_00576 PF02541 Ppx/GppA phosphatase family A254_00577 PF02503 Polyphosphate kinase middle domain A254_00577 PF13089 Polyphosphate kinase N-terminal domain A254_00577 PF13090 Polyphosphate kinase C-terminal domain A254_00580 PF00586 AIR synthase related protein, N-terminal domain A254_00580 PF02769 AIR synthase related protein, C-terminal domain A254_00581 PF00551 Formyl transferase A254_00582 PF01113 Dihydrodipicolinate reductase, N-terminus A254_00582 PF05173 Dihydrodipicolinate reductase, C-terminus A254_00583 PF00633 Helix-hairpin-helix motif A254_00583 PF00730 HhH-GPD superfamily base excision DNA repair protein A254_00584 PF02631 RecX family A254_00585 PF00501 AMP-binding enzyme A254_00585 PF14535 AMP-binding enzyme C-terminal domain A254_00586 PF00326 Prolyl oligopeptidase family A254_00586 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region A254_00586 PF07676 WD40-like Beta Propeller Repeat A254_00589 PF00893 Small Multidrug Resistance protein A254_00591 PF13086 AAA domain A254_00591 PF13087 AAA domain A254_00593 PF10938 YfdX protein A254_00594 PF02566 OsmC-like protein A254_00595 PF00521 DNA gyrase/topoisomerase IV, subunit A A254_00595 PF03989 DNA gyrase C-terminal domain, beta-propeller A254_00596 PF01134 Glucose inhibited division protein A A254_00597 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A254_00597 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A254_00598 PF03547 A254_00598 A254_00599 PF00205 Thiamine pyrophosphate enzyme, central domain A254_00599 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A254_00599 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A254_00600 PF13202 EF hand A254_00601 PF09618 CRISPR-associated protein (Cas_Csy4) A254_00602 PF09615 A254_00602 A254_00603 PF09614 A254_00603 A254_00604 PF09611 A254_00604 A254_00606 PF01867 CRISPR associated protein Cas1 A254_00607 PF00881 Nitroreductase family A254_00608 PF00180 Isocitrate/isopropylmalate dehydrogenase A254_00609 PF01053 Cys/Met metabolism PLP-dependent enzyme A254_00610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_00610 PF03466 LysR substrate binding domain A254_00612 PF02565 Recombination protein O C terminal A254_00612 PF11967 Recombination protein O N terminal A254_00613 PF01541 GIY-YIG catalytic domain A254_00613 PF02151 UvrB/uvrC motif A254_00613 PF08459 UvrC Helix-hairpin-helix N-terminal A254_00613 PF12826 Helix-hairpin-helix motif A254_00614 PF00430 ATP synthase B/B' CF(0) A254_00615 PF00430 ATP synthase B/B' CF(0) A254_00616 PF00137 ATP synthase subunit C A254_00617 PF00119 ATP synthase A chain A254_00618 PF09527 A254_00618 A254_00619 PF07027 A254_00619 A254_00620 PF13617 A254_00620 A254_00621 PF11739 A254_00621 A254_00622 PF04002 RadC-like JAB domain A254_00623 PF00206 Lyase A254_00623 PF10397 Adenylosuccinate lyase C-terminus A254_00624 PF00226 DnaJ domain A254_00624 PF00684 DnaJ central domain A254_00624 PF01556 DnaJ C terminal domain A254_00625 PF00012 Hsp70 protein A254_00626 PF12710 haloacid dehalogenase-like hydrolase A254_00627 PF01546 Peptidase family M20/M25/M40 A254_00627 PF07687 Peptidase dimerisation domain A254_00628 PF04958 Arginine N-succinyltransferase beta subunit A254_00629 PF00156 Phosphoribosyl transferase domain A254_00630 PF00962 Adenosine/AMP deaminase A254_00631 PF00704 Glycosyl hydrolases family 18 A254_00631 PF01522 Polysaccharide deacetylase A254_00631 PF13641 Glycosyltransferase like family 2 A254_00632 PF01594 A254_00632 A254_00633 PF02561 Flagellar protein FliS A254_00634 PF02465 A254_00634 A254_00634 PF07195 A254_00634 A254_00635 PF01312 FlhB HrpN YscU SpaS Family A254_00636 PF01311 A254_00636 A254_00637 PF01313 A254_00637 A254_00638 PF00813 A254_00638 A254_00639 PF04347 A254_00639 A254_00640 PF01052 Surface presentation of antigens (SPOA) A254_00641 PF01052 Surface presentation of antigens (SPOA) A254_00641 PF02154 Flagellar motor switch protein FliM A254_00642 PF03748 A254_00642 A254_00643 PF02120 Flagellar hook-length control protein FliK A254_00644 PF02050 Flagellar FliJ protein A254_00645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A254_00647 PF01706 FliG C-terminal domain A254_00647 PF14841 FliG middle domain A254_00647 PF14842 FliG N-terminal domain A254_00648 PF01514 Secretory protein of YscJ/FliF family A254_00648 PF08345 A254_00648 A254_00649 PF02049 A254_00649 A254_00650 PF00158 Sigma-54 interaction domain A254_00650 PF02954 Bacterial regulatory protein, Fis family A254_00651 PF00669 Bacterial flagellin N-terminal helical region A254_00651 PF00700 Bacterial flagellin C-terminal helical region A254_00654 PF04539 Sigma-70 region 3 A254_00654 PF04542 Sigma-70 region 2 A254_00654 PF04545 Sigma-70, region 4 A254_00655 PF10609 ParA/MinD ATPase like A254_00656 PF00771 FHIPEP family A254_00658 PF04316 Anti-sigma-28 factor, FlgM A254_00659 PF13144 SAF-like A254_00660 PF00691 OmpA family A254_00661 PF01618 A254_00661 A254_00662 PF00460 Flagella basal body rod protein A254_00663 PF00460 Flagella basal body rod protein A254_00663 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A254_00664 PF03963 A254_00664 A254_00664 PF13860 FlgD Ig-like domain A254_00665 PF00460 Flagella basal body rod protein A254_00665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A254_00666 PF00460 Flagella basal body rod protein A254_00666 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A254_00667 PF00460 Flagella basal body rod protein A254_00667 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A254_00668 PF02107 A254_00668 A254_00669 PF02119 A254_00669 A254_00670 PF10135 A254_00670 A254_00671 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A254_00672 PF00669 Bacterial flagellin N-terminal helical region A254_00673 PF01618 A254_00673 A254_00674 PF00691 OmpA family A254_00674 PF13677 A254_00674 A254_00675 PF00072 Response regulator receiver domain A254_00675 PF00512 His Kinase A (phospho-acceptor) domain A254_00675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00676 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A254_00677 PF00589 Phage integrase family A254_00677 PF02899 Phage integrase, N-terminal SAM-like domain A254_00680 PF01202 Shikimate kinase A254_00681 PF01761 3-dehydroquinate synthase A254_00682 PF04241 A254_00682 A254_00683 PF01592 NifU-like N terminal domain A254_00684 PF02674 A254_00684 A254_00685 PF13481 AAA domain A254_00685 PF13541 Subunit ChlI of Mg-chelatase A254_00686 PF06305 A254_00686 A254_00687 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A254_00688 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A254_00689 PF00291 Pyridoxal-phosphate dependent enzyme A254_00690 PF00290 Tryptophan synthase alpha chain A254_00691 PF01039 Carboxyl transferase domain A254_00692 PF08245 Mur ligase middle domain A254_00693 PF07690 Major Facilitator Superfamily A254_00694 PF00375 Sodium:dicarboxylate symporter family A254_00695 PF00849 RNA pseudouridylate synthase A254_00695 PF01479 S4 domain A254_00696 PF03602 Conserved hypothetical protein 95 A254_00697 PF00580 UvrD/REP helicase N-terminal domain A254_00697 PF13361 UvrD-like helicase C-terminal domain A254_00698 PF04399 Glutaredoxin 2, C terminal domain A254_00698 PF13417 Glutathione S-transferase, N-terminal domain A254_00699 PF00005 ABC transporter A254_00699 PF09821 A254_00699 A254_00700 PF00528 Binding-protein-dependent transport system inner membrane component A254_00702 PF06325 Ribosomal protein L11 methyltransferase (PrmA) A254_00703 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A254_00705 PF00549 CoA-ligase A254_00705 PF02629 CoA binding domain A254_00706 PF07690 Major Facilitator Superfamily A254_00707 PF00270 DEAD/DEAH box helicase A254_00707 PF00271 Helicase conserved C-terminal domain A254_00707 PF04408 Helicase associated domain (HA2) A254_00707 PF08482 A254_00707 A254_00708 PF00348 Polyprenyl synthetase A254_00709 PF01817 Chorismate mutase type II A254_00710 PF00155 Aminotransferase class I and II A254_00711 PF05673 Protein of unknown function (DUF815) A254_00712 PF07995 Glucose / Sorbosone dehydrogenase A254_00713 PF02576 Uncharacterised BCR, YhbC family COG0779 A254_00713 PF17384 A254_00713 A254_00714 PF00575 S1 RNA binding domain A254_00714 PF08529 NusA N-terminal domain A254_00714 PF13184 NusA-like KH domain A254_00714 PF14520 Helix-hairpin-helix domain A254_00715 PF04296 Protein of unknown function (DUF448) A254_00716 PF00009 Elongation factor Tu GTP binding domain A254_00716 PF04760 Translation initiation factor IF-2, N-terminal region A254_00716 PF08364 A254_00716 A254_00716 PF11987 Translation-initiation factor 2 A254_00717 PF02033 Ribosome-binding factor A A254_00718 PF00265 Thymidine kinase A254_00719 PF01509 TruB family pseudouridylate synthase (N terminal domain) A254_00719 PF16198 A254_00719 A254_00720 PF00312 Ribosomal protein S15 A254_00721 PF00013 KH domain A254_00721 PF00575 S1 RNA binding domain A254_00721 PF01138 3' exoribonuclease family, domain 1 A254_00721 PF03725 3' exoribonuclease family, domain 2 A254_00721 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A254_00722 PF07568 A254_00722 A254_00723 PF00654 Voltage gated chloride channel A254_00724 PF00916 A254_00724 A254_00724 PF01740 STAS domain A254_00725 PF00218 Indole-3-glycerol phosphate synthase A254_00726 PF00180 Isocitrate/isopropylmalate dehydrogenase A254_00727 PF00330 Aconitase family (aconitate hydratase) A254_00727 PF00694 Aconitase C-terminal domain A254_00729 PF01196 Ribosomal protein L17 A254_00730 PF01000 RNA polymerase Rpb3/RpoA insert domain A254_00730 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A254_00730 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A254_00731 PF00411 Ribosomal protein S11 A254_00732 PF00416 Ribosomal protein S13/S18 A254_00733 PF00406 Adenylate kinase A254_00733 PF05191 Adenylate kinase, active site lid A254_00734 PF00344 SecY translocase A254_00735 PF00828 Ribosomal protein L18e/L15 A254_00736 PF00327 Ribosomal protein L30p/L7e A254_00737 PF00333 Ribosomal protein S5, N-terminal domain A254_00737 PF03719 Ribosomal protein S5, C-terminal domain A254_00738 PF00861 Ribosomal L18p/L5e family A254_00739 PF00347 Ribosomal protein L6 A254_00740 PF00410 Ribosomal protein S8 A254_00741 PF00253 Ribosomal protein S14p/S29e A254_00742 PF00281 Ribosomal protein L5 A254_00742 PF00673 ribosomal L5P family C-terminus A254_00743 PF17136 A254_00743 A254_00744 PF00238 Ribosomal protein L14p/L23e A254_00745 PF00366 Ribosomal protein S17 A254_00746 PF00831 Ribosomal L29 protein A254_00747 PF00252 Ribosomal protein L16p/L10e A254_00748 PF00189 Ribosomal protein S3, C-terminal domain A254_00748 PF07650 KH domain A254_00749 PF00237 Ribosomal protein L22p/L17e A254_00750 PF00203 Ribosomal protein S19 A254_00751 PF00181 Ribosomal Proteins L2, RNA binding domain A254_00751 PF03947 Ribosomal Proteins L2, C-terminal domain A254_00752 PF00276 Ribosomal protein L23 A254_00753 PF00573 Ribosomal protein L4/L1 family A254_00754 PF00297 Ribosomal protein L3 A254_00755 PF00338 Ribosomal protein S10p/S20e A254_00756 PF00009 Elongation factor Tu GTP binding domain A254_00756 PF03143 Elongation factor Tu C-terminal domain A254_00756 PF03144 Elongation factor Tu domain 2 A254_00757 PF00009 Elongation factor Tu GTP binding domain A254_00757 PF00679 Elongation factor G C-terminus A254_00757 PF03144 Elongation factor Tu domain 2 A254_00757 PF03764 Elongation factor G, domain IV A254_00757 PF14492 Elongation Factor G, domain II A254_00758 PF00177 Ribosomal protein S7p/S5e A254_00759 PF00164 Ribosomal protein S12/S23 A254_00760 PF01569 PAP2 superfamily A254_00761 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A254_00761 PF07992 Pyridine nucleotide-disulphide oxidoreductase A254_00762 PF03061 Thioesterase superfamily A254_00763 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A254_00763 PF00364 Biotin-requiring enzyme A254_00763 PF02817 e3 binding domain A254_00764 PF11776 Domain of unknown function (DUF3315) A254_00765 PF13673 Acetyltransferase (GNAT) domain A254_00766 PF13185 GAF domain A254_00767 PF00472 RF-1 domain A254_00768 PF00849 RNA pseudouridylate synthase A254_00769 PF00535 Glycosyl transferase family 2 A254_00769 PF04138 A254_00769 A254_00771 PF04138 A254_00771 A254_00773 PF00905 Penicillin binding protein transpeptidase domain A254_00773 PF00912 Transglycosylase A254_00774 PF00132 Bacterial transferase hexapeptide (six repeats) A254_00774 PF12804 MobA-like NTP transferase domain A254_00775 PF13419 Haloacid dehalogenase-like hydrolase A254_00776 PF01103 Surface antigen A254_00777 PF04357 A254_00777 A254_00778 PF07690 Major Facilitator Superfamily A254_00779 PF00120 Glutamine synthetase, catalytic domain A254_00779 PF03951 Glutamine synthetase, beta-Grasp domain A254_00780 PF00543 Nitrogen regulatory protein P-II A254_00781 PF00557 Metallopeptidase family M24 A254_00781 PF01321 Creatinase/Prolidase N-terminal domain A254_00781 PF16188 A254_00781 A254_00781 PF16189 A254_00781 A254_00782 PF00326 Prolyl oligopeptidase family A254_00782 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A254_00786 PF03328 HpcH/HpaI aldolase/citrate lyase family A254_00787 PF13452 N-terminal half of MaoC dehydratase A254_00788 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A254_00788 PF02770 Acyl-CoA dehydrogenase, middle domain A254_00788 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A254_00789 PF02308 A254_00789 A254_00790 PF00742 Homoserine dehydrogenase A254_00790 PF03447 Homoserine dehydrogenase, NAD binding domain A254_00791 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A254_00793 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00793 PF05226 A254_00793 A254_00794 PF01476 LysM domain A254_00794 PF04773 FecR protein A254_00795 PF00072 Response regulator receiver domain A254_00795 PF00486 Transcriptional regulatory protein, C terminal A254_00797 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A254_00797 PF01872 RibD C-terminal domain A254_00798 PF00677 Lumazine binding domain A254_00799 PF00925 GTP cyclohydrolase II A254_00799 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A254_00800 PF00885 6,7-dimethyl-8-ribityllumazine synthase A254_00801 PF08511 COQ9 A254_00802 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_00802 PF03466 LysR substrate binding domain A254_00804 PF00425 chorismate binding enzyme A254_00804 PF04715 Anthranilate synthase component I, N terminal region A254_00805 PF13145 PPIC-type PPIASE domain A254_00805 PF13624 SurA N-terminal domain A254_00806 PF00121 Triosephosphate isomerase A254_00807 PF03840 Preprotein translocase SecG subunit A254_00808 PF00117 Glutamine amidotransferase class-I A254_00808 PF06418 CTP synthase N-terminus A254_00809 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A254_00809 PF03129 Anticodon binding domain A254_00810 PF02687 A254_00810 A254_00810 PF12704 MacB-like periplasmic core domain A254_00811 PF00005 ABC transporter A254_00812 PF01037 AsnC family A254_00812 PF13412 Winged helix-turn-helix DNA-binding A254_00813 PF00111 2Fe-2S iron-sulfur cluster binding domain A254_00814 PF01268 Formate--tetrahydrofolate ligase A254_00815 PF01926 50S ribosome-binding GTPase A254_00815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A254_00816 PF13360 PQQ-like domain A254_00816 PF13570 PQQ-like domain A254_00817 PF09976 Tetratricopeptide repeat A254_00819 PF07486 Cell Wall Hydrolase A254_00821 PF03062 A254_00821 A254_00822 PF00657 GDSL-like Lipase/Acylhydrolase A254_00823 PF13472 GDSL-like Lipase/Acylhydrolase family A254_00824 PF00268 Ribonucleotide reductase, small chain A254_00825 PF13419 Haloacid dehalogenase-like hydrolase A254_00826 PF07542 ATP12 chaperone protein A254_00828 PF00849 RNA pseudouridylate synthase A254_00831 PF01124 MAPEG family A254_00832 PF05433 A254_00832 A254_00833 PF00625 Guanylate kinase A254_00834 PF00491 Arginase family A254_00835 PF00132 Bacterial transferase hexapeptide (six repeats) A254_00835 PF14602 Hexapeptide repeat of succinyl-transferase A254_00835 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal A254_00836 PF13419 Haloacid dehalogenase-like hydrolase A254_00837 PF01521 Iron-sulphur cluster biosynthesis A254_00838 PF01883 Domain of unknown function DUF59 A254_00839 PF00266 Aminotransferase class-V A254_00840 PF01458 Uncharacterized protein family (UPF0051) A254_00841 PF00005 ABC transporter A254_00842 PF01458 Uncharacterized protein family (UPF0051) A254_00843 PF02082 Transcriptional regulator A254_00844 PF00155 Aminotransferase class I and II A254_00845 PF02153 Prephenate dehydrogenase A254_00846 PF01553 Acyltransferase A254_00847 PF02698 DUF218 domain A254_00849 PF00005 ABC transporter A254_00850 PF13717 A254_00850 A254_00851 PF02325 A254_00851 A254_00852 PF01914 A254_00852 A254_00853 PF00204 DNA gyrase B A254_00853 PF00986 DNA gyrase B subunit, carboxyl terminus A254_00853 PF01751 Toprim domain A254_00853 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00854 PF01430 Hsp33 protein A254_00855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A254_00855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A254_00856 PF00202 Aminotransferase class-III A254_00857 PF07750 A254_00857 A254_00858 PF01061 A254_00858 A254_00859 PF00004 ATPase family associated with various cellular activities (AAA) A254_00859 PF02861 Clp amino terminal domain A254_00859 PF07724 AAA domain (Cdc48 subfamily) A254_00859 PF10431 C-terminal, D2-small domain, of ClpB protein A254_00861 PF02541 Ppx/GppA phosphatase family A254_00862 PF01728 FtsJ-like methyltransferase A254_00863 PF00563 EAL domain A254_00863 PF00990 GGDEF domain A254_00865 PF13884 Chaperone of endosialidase A254_00876 PF17236 A254_00876 A254_00882 PF04466 Phage terminase large subunit A254_00883 PF13384 Homeodomain-like domain A254_00884 PF00730 HhH-GPD superfamily base excision DNA repair protein A254_00888 PF02435 Levansucrase/Invertase A254_00889 PF02435 Levansucrase/Invertase A254_00892 PF01037 AsnC family A254_00892 PF13412 Winged helix-turn-helix DNA-binding A254_00893 PF01177 Asp/Glu/Hydantoin racemase A254_00894 PF02685 Glucokinase A254_00895 PF00920 Dehydratase family A254_00896 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A254_00896 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A254_00897 PF00083 Sugar (and other) transporter A254_00898 PF00533 BRCA1 C Terminus (BRCT) domain A254_00898 PF01653 NAD-dependent DNA ligase adenylation domain A254_00898 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A254_00898 PF03120 NAD-dependent DNA ligase OB-fold domain A254_00898 PF12826 Helix-hairpin-helix motif A254_00899 PF01702 Queuine tRNA-ribosyltransferase A254_00900 PF00271 Helicase conserved C-terminal domain A254_00900 PF02151 UvrB/uvrC motif A254_00900 PF04851 Type III restriction enzyme, res subunit A254_00900 PF12344 Ultra-violet resistance protein B A254_00902 PF01098 A254_00902 A254_00903 PF00905 Penicillin binding protein transpeptidase domain A254_00903 PF03717 Penicillin-binding Protein dimerisation domain A254_00905 PF04085 rod shape-determining protein MreC A254_00906 PF06723 MreB/Mbl protein A254_00907 PF01119 DNA mismatch repair protein, C-terminal domain A254_00907 PF08676 MutL C terminal dimerisation domain A254_00907 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00908 PF00106 short chain dehydrogenase A254_00908 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A254_00910 PF13087 AAA domain A254_00910 PF13195 A254_00910 A254_00911 PF08857 Putative ParB-like nuclease A254_00912 PF02622 Uncharacterized ACR, COG1678 A254_00913 PF01926 50S ribosome-binding GTPase A254_00913 PF13167 A254_00913 A254_00913 PF16360 A254_00913 A254_00914 PF17209 A254_00914 A254_00915 PF00909 Ammonium Transporter Family A254_00916 PF03372 Endonuclease/Exonuclease/phosphatase family A254_00917 PF01523 Putative modulator of DNA gyrase A254_00918 PF01063 Aminotransferase class IV A254_00919 PF00155 Aminotransferase class I and II A254_00920 PF13561 Enoyl-(Acyl carrier protein) reductase A254_00921 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A254_00921 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A254_00921 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A254_00921 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A254_00923 PF09140 ATPase MipZ A254_00924 PF02581 Thiamine monophosphate synthase/TENI A254_00925 PF05951 A254_00925 A254_00926 PF00459 Inositol monophosphatase family A254_00927 PF01132 Elongation factor P (EF-P) OB domain A254_00927 PF08207 Elongation factor P (EF-P) KOW-like domain A254_00927 PF09285 Elongation factor P, C-terminal A254_00928 PF00581 Rhodanese-like domain A254_00928 PF01053 Cys/Met metabolism PLP-dependent enzyme A254_00929 PF14489 QueF-like protein A254_00930 PF11233 A254_00930 A254_00931 PF01252 A254_00931 A254_00932 PF00133 tRNA synthetases class I (I, L, M and V) A254_00932 PF08264 Anticodon-binding domain of tRNA A254_00933 PF01687 Riboflavin kinase A254_00933 PF06574 FAD synthetase A254_00934 PF00186 Dihydrofolate reductase A254_00936 PF05406 WGR domain A254_00937 PF13561 Enoyl-(Acyl carrier protein) reductase A254_00939 PF13091 PLD-like domain A254_00939 PF13396 A254_00939 A254_00940 PF14196 A254_00940 A254_00941 PF01546 Peptidase family M20/M25/M40 A254_00941 PF07687 Peptidase dimerisation domain A254_00942 PF03807 NADP oxidoreductase coenzyme F420-dependent A254_00942 PF14748 Pyrroline-5-carboxylate reductase dimerisation A254_00943 PF13561 Enoyl-(Acyl carrier protein) reductase A254_00944 PF05159 A254_00944 A254_00945 PF00534 Glycosyl transferases group 1 A254_00946 PF07876 Stress responsive A/B Barrel Domain A254_00947 PF00762 Ferrochelatase A254_00948 PF13467 Ribbon-helix-helix domain A254_00949 PF16357 A254_00949 A254_00950 PF02601 A254_00950 A254_00950 PF13742 A254_00950 A254_00951 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A254_00951 PF02843 Phosphoribosylglycinamide synthetase, C domain A254_00951 PF02844 Phosphoribosylglycinamide synthetase, N domain A254_00953 PF01595 A254_00953 A254_00953 PF03471 Transporter associated domain A254_00954 PF14437 A254_00954 A254_00955 PF00830 Ribosomal L28 family A254_00957 PF00083 Sugar (and other) transporter A254_00958 PF01790 A254_00958 A254_00959 PF04286 A254_00959 A254_00960 PF16576 A254_00960 A254_00961 PF04402 Protein of unknown function (DUF541) A254_00962 PF02321 Outer membrane efflux protein A254_00963 PF00873 AcrB/AcrD/AcrF family A254_00964 PF16576 A254_00964 A254_00965 PF00440 Bacterial regulatory proteins, tetR family A254_00966 PF00313 'Cold-shock' DNA-binding domain A254_00967 PF01612 3'-5' exonuclease A254_00968 PF06835 Lipopolysaccharide-assembly, LptC-related A254_00969 PF03968 OstA-like protein A254_00970 PF00005 ABC transporter A254_00971 PF00309 A254_00971 A254_00971 PF04552 Sigma-54, DNA binding domain A254_00971 PF04963 Sigma-54 factor, core binding domain A254_00972 PF00438 S-adenosylmethionine synthetase, N-terminal domain A254_00972 PF02772 S-adenosylmethionine synthetase, central domain A254_00972 PF02773 S-adenosylmethionine synthetase, C-terminal domain A254_00973 PF00795 Carbon-nitrogen hydrolase A254_00979 PF13650 Aspartyl protease A254_00982 PF13650 Aspartyl protease A254_00983 PF03379 A254_00983 A254_00984 PF00005 ABC transporter A254_00985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_00985 PF08521 A254_00985 A254_00986 PF00072 Response regulator receiver domain A254_00986 PF00486 Transcriptional regulatory protein, C terminal A254_00987 PF01565 FAD binding domain A254_00987 PF09330 D-lactate dehydrogenase, membrane binding A254_00988 PF13437 HlyD family secretion protein A254_00988 PF13533 Biotin-lipoyl like A254_00989 PF00005 ABC transporter A254_00989 PF00664 ABC transporter transmembrane region A254_00990 PF02321 Outer membrane efflux protein A254_00992 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease A254_00993 PF00072 Response regulator receiver domain A254_00994 PF00471 Ribosomal protein L33 A254_00995 PF00004 ATPase family associated with various cellular activities (AAA) A254_00995 PF07724 AAA domain (Cdc48 subfamily) A254_00996 PF00227 Proteasome subunit A254_00997 PF00216 Bacterial DNA-binding protein A254_00998 PF09694 A254_00998 A254_00999 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A254_01000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A254_01000 PF02874 ATP synthase alpha/beta family, beta-barrel domain A254_01001 PF00231 ATP synthase A254_01002 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A254_01002 PF00306 ATP synthase alpha/beta chain, C terminal domain A254_01002 PF02874 ATP synthase alpha/beta family, beta-barrel domain A254_01003 PF00213 ATP synthase delta (OSCP) subunit A254_01004 PF10609 ParA/MinD ATPase like A254_01005 PF13180 PDZ domain A254_01005 PF13365 Trypsin-like peptidase domain A254_01006 PF12680 SnoaL-like domain A254_01008 PF00588 SpoU rRNA Methylase family A254_01008 PF08032 RNA 2'-O ribose methyltransferase substrate binding A254_01010 PF00005 ABC transporter A254_01011 PF01032 FecCD transport family A254_01012 PF13440 A254_01012 A254_01013 PF00476 DNA polymerase family A A254_01013 PF01367 5'-3' exonuclease, C-terminal SAM fold A254_01013 PF01612 3'-5' exonuclease A254_01013 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A254_01014 PF00106 short chain dehydrogenase A254_01015 PF00561 alpha/beta hydrolase fold A254_01016 PF07021 Methionine biosynthesis protein MetW A254_01017 PF10988 Protein of unknown function (DUF2807) A254_01018 PF07045 Protein of unknown function (DUF1330) A254_01019 PF02559 CarD-like/TRCF domain A254_01020 PF00037 4Fe-4S binding domain A254_01020 PF11953 Domain of unknown function (DUF3470) A254_01021 PF00271 Helicase conserved C-terminal domain A254_01022 PF01551 Peptidase family M23 A254_01023 PF01812 5-formyltetrahydrofolate cyclo-ligase family A254_01024 PF01554 MatE A254_01025 PF03797 Autotransporter beta-domain A254_01026 PF00829 Ribosomal prokaryotic L21 protein A254_01027 PF01016 Ribosomal L27 protein A254_01028 PF13302 Acetyltransferase (GNAT) domain A254_01029 PF01018 GTP1/OBG A254_01029 PF01926 50S ribosome-binding GTPase A254_01030 PF00696 Amino acid kinase family A254_01030 PF01472 PUA domain A254_01031 PF13460 NADH(P)-binding A254_01032 PF01545 Cation efflux family A254_01033 PF00376 MerR family regulatory protein A254_01033 PF09278 MerR, DNA binding A254_01034 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A254_01034 PF12729 A254_01034 A254_01035 PF00117 Glutamine amidotransferase class-I A254_01036 PF00591 Glycosyl transferase family, a/b domain A254_01036 PF02885 Glycosyl transferase family, helical bundle domain A254_01037 PF00717 Peptidase S24-like A254_01037 PF01726 LexA DNA binding domain A254_01038 PF00472 RF-1 domain A254_01038 PF03462 PCRF domain A254_01039 PF00905 Penicillin binding protein transpeptidase domain A254_01039 PF00912 Transglycosylase A254_01039 PF17092 A254_01039 A254_01041 PF01520 N-acetylmuramoyl-L-alanine amidase A254_01044 PF00575 S1 RNA binding domain A254_01044 PF10150 Ribonuclease E/G family A254_01045 PF01435 Peptidase family M48 A254_01046 PF01323 DSBA-like thioredoxin domain A254_01047 PF01380 SIS domain A254_01047 PF01418 Helix-turn-helix domain, rpiR family A254_01048 PF03313 A254_01048 A254_01048 PF03315 Serine dehydratase beta chain A254_01049 PF00593 TonB dependent receptor A254_01049 PF07715 TonB-dependent Receptor Plug Domain A254_01051 PF01474 Class-II DAHP synthetase family A254_01052 PF01406 tRNA synthetases class I (C) catalytic domain A254_01054 PF00005 ABC transporter A254_01054 PF12848 ABC transporter A254_01055 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A254_01055 PF05221 S-adenosyl-L-homocysteine hydrolase A254_01056 PF04551 GcpE protein A254_01057 PF01791 DeoC/LacD family aldolase A254_01058 PF00162 Phosphoglycerate kinase A254_01059 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A254_01059 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A254_01060 PF00456 Transketolase, thiamine diphosphate binding domain A254_01060 PF02779 Transketolase, pyrimidine binding domain A254_01060 PF02780 Transketolase, C-terminal domain A254_01062 PF12680 SnoaL-like domain A254_01063 PF05164 Cell division protein ZapA A254_01064 PF01964 ThiC family A254_01064 PF13667 ThiC-associated domain A254_01065 PF07715 TonB-dependent Receptor Plug Domain A254_01066 PF03009 Glycerophosphoryl diester phosphodiesterase family A254_01067 PF00691 OmpA family A254_01068 PF04052 TolB amino-terminal domain A254_01068 PF07676 WD40-like Beta Propeller Repeat A254_01070 PF02472 Biopolymer transport protein ExbD/TolR A254_01071 PF01618 A254_01071 A254_01072 PF13279 Thioesterase-like superfamily A254_01073 PF05491 Holliday junction DNA helicase ruvB C-terminus A254_01073 PF05496 Holliday junction DNA helicase ruvB N-terminus A254_01074 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A254_01074 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A254_01076 PF01330 RuvA N terminal domain A254_01076 PF07499 RuvA, C-terminal domain A254_01076 PF14520 Helix-hairpin-helix domain A254_01077 PF02075 Crossover junction endodeoxyribonuclease RuvC A254_01078 PF01709 Transcriptional regulator A254_01079 PF10073 A254_01079 A254_01080 PF00224 Pyruvate kinase, barrel domain A254_01080 PF02887 Pyruvate kinase, alpha/beta domain A254_01081 PF00583 Acetyltransferase (GNAT) family A254_01082 PF02390 Putative methyltransferase A254_01083 PF09912 A254_01083 A254_01084 PF02225 PA domain A254_01084 PF04389 Peptidase family M28 A254_01085 PF00890 FAD binding domain A254_01085 PF02910 Fumarate reductase flavoprotein C-term A254_01086 PF00005 ABC transporter A254_01087 PF01168 Alanine racemase, N-terminal domain A254_01088 PF01451 Low molecular weight phosphotyrosine protein phosphatase A254_01089 PF03881 Fructosamine kinase A254_01090 PF08238 Sel1 repeat A254_01091 PF08238 Sel1 repeat A254_01092 PF08238 Sel1 repeat A254_01093 PF08238 Sel1 repeat A254_01094 PF08238 Sel1 repeat A254_01095 PF08238 Sel1 repeat A254_01096 PF08238 Sel1 repeat A254_01097 PF08238 Sel1 repeat A254_01098 PF00149 Calcineurin-like phosphoesterase A254_01099 PF01569 PAP2 superfamily A254_01100 PF00593 TonB dependent receptor A254_01100 PF07715 TonB-dependent Receptor Plug Domain A254_01101 PF02265 S1/P1 Nuclease A254_01104 PF04073 Aminoacyl-tRNA editing domain A254_01105 PF01935 Domain of unknown function DUF87 A254_01107 PF00004 ATPase family associated with various cellular activities (AAA) A254_01107 PF12002 MgsA AAA+ ATPase C terminal A254_01107 PF16193 A254_01107 A254_01108 PF13561 Enoyl-(Acyl carrier protein) reductase A254_01109 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_01109 PF03466 LysR substrate binding domain A254_01110 PF01180 Dihydroorotate dehydrogenase A254_01111 PF06965 Na+/H+ antiporter 1 A254_01112 PF03063 Prismane/CO dehydrogenase family A254_01113 PF02082 Transcriptional regulator A254_01114 PF01063 Aminotransferase class IV A254_01115 PF00117 Glutamine amidotransferase class-I A254_01116 PF00425 chorismate binding enzyme A254_01116 PF04715 Anthranilate synthase component I, N terminal region A254_01118 PF00005 ABC transporter A254_01118 PF16326 A254_01118 A254_01121 PF00893 Small Multidrug Resistance protein A254_01122 PF12804 MobA-like NTP transferase domain A254_01123 PF00694 Aconitase C-terminal domain A254_01124 PF00330 Aconitase family (aconitate hydratase) A254_01125 PF00144 Beta-lactamase A254_01126 PF01370 NAD dependent epimerase/dehydratase family A254_01127 PF01638 HxlR-like helix-turn-helix A254_01128 PF07690 Major Facilitator Superfamily A254_01129 PF01066 CDP-alcohol phosphatidyltransferase A254_01131 PF04055 Radical SAM superfamily A254_01131 PF06968 Biotin and Thiamin Synthesis associated domain A254_01133 PF00106 short chain dehydrogenase A254_01136 PF02824 TGS domain A254_01136 PF04607 Region found in RelA / SpoT proteins A254_01136 PF13291 ACT domain A254_01136 PF13328 HD domain A254_01137 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A254_01138 PF13466 STAS domain A254_01139 PF01584 CheW-like domain A254_01139 PF01627 Hpt domain A254_01139 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_01139 PF02895 Signal transducing histidine kinase, homodimeric domain A254_01140 PF01739 CheR methyltransferase, SAM binding domain A254_01140 PF03705 CheR methyltransferase, all-alpha domain A254_01141 PF00072 Response regulator receiver domain A254_01141 PF01339 CheB methylesterase A254_01142 PF03975 CheD chemotactic sensory transduction A254_01143 PF00072 Response regulator receiver domain A254_01144 PF01584 CheW-like domain A254_01145 PF00919 Uncharacterized protein family UPF0004 A254_01145 PF01938 TRAM domain A254_01145 PF04055 Radical SAM superfamily A254_01146 PF02562 PhoH-like protein A254_01147 PF02130 Uncharacterized protein family UPF0054 A254_01148 PF00571 CBS domain A254_01148 PF03471 Transporter associated domain A254_01149 PF07995 Glucose / Sorbosone dehydrogenase A254_01150 PF04399 Glutaredoxin 2, C terminal domain A254_01150 PF13417 Glutathione S-transferase, N-terminal domain A254_01151 PF04985 A254_01151 A254_01152 PF08238 Sel1 repeat A254_01153 PF04966 Carbohydrate-selective porin, OprB family A254_01154 PF00248 Aldo/keto reductase family A254_01155 PF00328 Histidine phosphatase superfamily (branch 2) A254_01157 PF02595 Glycerate kinase family A254_01158 PF09851 A254_01158 A254_01158 PF14470 Bacterial PH domain A254_01159 PF01380 SIS domain A254_01159 PF13522 Glutamine amidotransferase domain A254_01160 PF01925 A254_01160 A254_01161 PF12802 MarR family A254_01162 PF12697 Alpha/beta hydrolase family A254_01163 PF07690 Major Facilitator Superfamily A254_01164 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_01164 PF03466 LysR substrate binding domain A254_01165 PF01810 A254_01165 A254_01166 PF08238 Sel1 repeat A254_01168 PF02545 Maf-like protein A254_01169 PF01488 Shikimate / quinate 5-dehydrogenase A254_01169 PF08501 Shikimate dehydrogenase substrate binding domain A254_01170 PF01121 Dephospho-CoA kinase A254_01171 PF00929 Exonuclease A254_01172 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A254_01172 PF16321 A254_01172 A254_01173 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A254_01174 PF07372 Protein of unknown function (DUF1491) A254_01175 PF13857 Ankyrin repeats (many copies) A254_01176 PF03692 A254_01176 A254_01177 PF00593 TonB dependent receptor A254_01177 PF07715 TonB-dependent Receptor Plug Domain A254_01178 PF08238 Sel1 repeat A254_01179 PF04471 Restriction endonuclease A254_01179 PF14338 A254_01179 A254_01180 PF01808 AICARFT/IMPCHase bienzyme A254_01180 PF02142 MGS-like domain A254_01181 PF08238 Sel1 repeat A254_01182 PF00892 EamA-like transporter family A254_01183 PF01037 AsnC family A254_01183 PF13412 Winged helix-turn-helix DNA-binding A254_01184 PF02754 A254_01184 A254_01185 PF02589 Uncharacterised ACR, YkgG family COG1556 A254_01185 PF11870 A254_01185 A254_01185 PF13183 4Fe-4S dicluster domain A254_01186 PF02589 Uncharacterised ACR, YkgG family COG1556 A254_01187 PF07940 Heparinase II/III-like protein A254_01188 PF00834 Ribulose-phosphate 3 epimerase family A254_01189 PF01029 NusB family A254_01189 PF01189 NOL1/NOP2/sun family A254_01190 PF01025 GrpE A254_01191 PF01628 HrcA protein C terminal domain A254_01192 PF01138 3' exoribonuclease family, domain 1 A254_01192 PF03725 3' exoribonuclease family, domain 2 A254_01193 PF01725 Ham1 family A254_01194 PF04055 Radical SAM superfamily A254_01194 PF06969 HemN C-terminal domain A254_01196 PF01863 Protein of unknown function DUF45 A254_01197 PF00175 Oxidoreductase NAD-binding domain A254_01197 PF00258 Flavodoxin A254_01197 PF00667 FAD binding domain A254_01198 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A254_01198 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A254_01199 PF01507 Phosphoadenosine phosphosulfate reductase family A254_01200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A254_01200 PF10414 Sirohaem synthase dimerisation region A254_01200 PF13241 Putative NAD(P)-binding A254_01201 PF01507 Phosphoadenosine phosphosulfate reductase family A254_01202 PF00009 Elongation factor Tu GTP binding domain A254_01203 PF01583 Adenylylsulphate kinase A254_01204 PF00155 Aminotransferase class I and II A254_01205 PF00593 TonB dependent receptor A254_01205 PF07715 TonB-dependent Receptor Plug Domain A254_01206 PF01208 Uroporphyrinogen decarboxylase (URO-D) A254_01207 PF03653 A254_01207 A254_01208 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A254_01208 PF07497 Rho termination factor, RNA-binding domain A254_01208 PF07498 Rho termination factor, N-terminal domain A254_01209 PF00107 Zinc-binding dehydrogenase A254_01209 PF08240 Alcohol dehydrogenase GroES-like domain A254_01210 PF01738 Dienelactone hydrolase family A254_01211 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A254_01212 PF01926 50S ribosome-binding GTPase A254_01212 PF10396 GTP-binding protein TrmE N-terminus A254_01212 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE A254_01213 PF00593 TonB dependent receptor A254_01213 PF07715 TonB-dependent Receptor Plug Domain A254_01214 PF00248 Aldo/keto reductase family A254_01215 PF08450 SMP-30/Gluconolaconase/LRE-like region A254_01216 PF01134 Glucose inhibited division protein A A254_01216 PF13932 GidA associated domain 3 A254_01217 PF02527 rRNA small subunit methyltransferase G A254_01218 PF13614 AAA domain A254_01219 PF02195 ParB-like nuclease domain A254_01220 PF07690 Major Facilitator Superfamily A254_01222 PF02423 Ornithine cyclodeaminase/mu-crystallin family A254_01223 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_01223 PF03466 LysR substrate binding domain A254_01224 PF01810 A254_01224 A254_01225 PF02569 Pantoate-beta-alanine ligase A254_01226 PF02548 Ketopantoate hydroxymethyltransferase A254_01227 PF08238 Sel1 repeat A254_01228 PF13354 Beta-lactamase enzyme family A254_01229 PF13271 A254_01229 A254_01230 PF03772 A254_01230 A254_01231 PF00749 tRNA synthetases class I (E and Q), catalytic domain A254_01232 PF00285 Citrate synthase A254_01233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_01234 PF10098 A254_01234 A254_01238 PF00534 Glycosyl transferases group 1 A254_01238 PF13439 Glycosyltransferase Family 4 A254_01239 PF02463 RecF/RecN/SMC N terminal domain A254_01240 PF00390 Malic enzyme, N-terminal domain A254_01240 PF03949 Malic enzyme, NAD binding domain A254_01241 PF00118 TCP-1/cpn60 chaperonin family A254_01242 PF00166 Chaperonin 10 Kd subunit A254_01243 PF01343 Peptidase family S49 A254_01244 PF01136 A254_01244 A254_01244 PF02036 SCP-2 sterol transfer family A254_01245 PF01136 A254_01245 A254_01246 PF00884 Sulfatase A254_01247 PF05159 A254_01247 A254_01248 PF00270 DEAD/DEAH box helicase A254_01248 PF00271 Helicase conserved C-terminal domain A254_01250 PF13899 Thioredoxin-like A254_01251 PF00202 Aminotransferase class-III A254_01252 PF00155 Aminotransferase class I and II A254_01254 PF08242 Methyltransferase domain A254_01254 PF13500 AAA domain A254_01255 PF00589 Phage integrase family A254_01255 PF02899 Phage integrase, N-terminal SAM-like domain A254_01256 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A254_01256 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A254_01257 PF01926 50S ribosome-binding GTPase A254_01257 PF06071 Protein of unknown function (DUF933) A254_01258 PF01195 Peptidyl-tRNA hydrolase A254_01259 PF01386 Ribosomal L25p family A254_01259 PF14693 Ribosomal protein TL5, C-terminal domain A254_01260 PF02620 A254_01260 A254_01261 PF04355 SmpA / OmlA family A254_01262 PF00488 MutS domain V A254_01262 PF01624 MutS domain I A254_01262 PF05188 MutS domain II A254_01262 PF05190 MutS family domain IV A254_01262 PF05192 MutS domain III A254_01264 PF00707 Translation initiation factor IF-3, C-terminal domain A254_01264 PF05198 Translation initiation factor IF-3, N-terminal domain A254_01265 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A254_01265 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A254_01266 PF00814 Glycoprotease family A254_01267 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A254_01267 PF03900 Porphobilinogen deaminase, C-terminal domain A254_01268 PF02602 Uroporphyrinogen-III synthase HemD A254_01270 PF01783 Ribosomal L32p protein family A254_01271 PF02504 Fatty acid synthesis protein A254_01272 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A254_01272 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A254_01274 PF02699 Preprotein translocase subunit A254_01275 PF02355 Protein export membrane protein A254_01275 PF07549 SecD/SecF GG Motif A254_01276 PF02355 Protein export membrane protein A254_01276 PF07549 SecD/SecF GG Motif A254_01277 PF00294 pfkB family carbohydrate kinase A254_01279 PF00291 Pyridoxal-phosphate dependent enzyme A254_01279 PF14821 Threonine synthase N terminus A254_01280 PF00675 Insulinase (Peptidase family M16) A254_01280 PF05193 Peptidase M16 inactive domain A254_01281 PF10672 S-adenosylmethionine-dependent methyltransferase A254_01283 PF00857 Isochorismatase family A254_01284 PF05145 A254_01284 A254_01285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A254_01286 PF02677 A254_01286 A254_01287 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A254_01288 PF05145 A254_01288 A254_01291 PF00490 Delta-aminolevulinic acid dehydratase A254_01292 PF00133 tRNA synthetases class I (I, L, M and V) A254_01292 PF08264 Anticodon-binding domain of tRNA A254_01292 PF10458 Valyl tRNA synthetase tRNA binding arm A254_01293 PF05096 Glutamine cyclotransferase A254_01294 PF10691 A254_01294 A254_01295 PF07345 Domain of unknown function (DUF1476) A254_01296 PF01722 BolA-like protein A254_01297 PF00462 Glutaredoxin A254_01298 PF14014 A254_01298 A254_01299 PF02445 Quinolinate synthetase A protein A254_01300 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A254_01300 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A254_01301 PF00445 Ribonuclease T2 family A254_01302 PF03099 Biotin/lipoate A/B protein ligase family A254_01303 PF03309 Type III pantothenate kinase A254_01304 PF07521 RNA-metabolising metallo-beta-lactamase A254_01304 PF12706 Beta-lactamase superfamily domain A254_01312 PF13419 Haloacid dehalogenase-like hydrolase A254_01313 PF03060 Nitronate monooxygenase A254_01314 PF01988 A254_01314 A254_01315 PF04966 Carbohydrate-selective porin, OprB family A254_01324 PF08808 A254_01324 A254_01325 PF00117 Glutamine amidotransferase class-I A254_01326 PF00155 Aminotransferase class I and II A254_01326 PF00392 Bacterial regulatory proteins, gntR family A254_01327 PF00701 Dihydrodipicolinate synthetase family A254_01328 PF00258 Flavodoxin A254_01329 PF09633 Protein of unknown function (DUF2023) A254_01330 PF13372 Alginate export A254_01331 PF01497 Periplasmic binding protein A254_01332 PF01032 FecCD transport family A254_01333 PF00005 ABC transporter A254_01334 PF03831 PhnA protein A254_01335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A254_01335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A254_01336 PF02424 ApbE family A254_01337 PF04246 A254_01337 A254_01338 PF00857 Isochorismatase family A254_01339 PF03459 TOBE domain A254_01340 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A254_01340 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A254_01341 PF03206 A254_01341 A254_01342 PF00682 HMGL-like A254_01343 PF00266 Aminotransferase class-V A254_01344 PF01106 NifU-like domain A254_01345 PF01521 Iron-sulphur cluster biosynthesis A254_01346 PF04891 A254_01346 A254_01347 PF13484 A254_01347 A254_01348 PF03270 Protein of unknown function, DUF269 A254_01349 PF02579 Dinitrogenase iron-molybdenum cofactor A254_01350 PF00148 Nitrogenase component 1 type Oxidoreductase A254_01351 PF00148 Nitrogenase component 1 type Oxidoreductase A254_01352 PF00148 Nitrogenase component 1 type Oxidoreductase A254_01352 PF11844 Domain of unknown function (DUF3364) A254_01353 PF00148 Nitrogenase component 1 type Oxidoreductase A254_01354 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family A254_01355 PF00593 TonB dependent receptor A254_01355 PF07715 TonB-dependent Receptor Plug Domain A254_01356 PF13289 A254_01356 A254_01357 PF06988 NifT/FixU protein A254_01358 PF04319 A254_01358 A254_01359 PF00037 4Fe-4S binding domain A254_01360 PF02579 Dinitrogenase iron-molybdenum cofactor A254_01360 PF04055 Radical SAM superfamily A254_01361 PF00158 Sigma-54 interaction domain A254_01361 PF02954 Bacterial regulatory protein, Fis family A254_01361 PF13185 GAF domain A254_01362 PF00593 TonB dependent receptor A254_01362 PF07715 TonB-dependent Receptor Plug Domain A254_01363 PF02508 A254_01363 A254_01364 PF04060 Putative Fe-S cluster A254_01364 PF14697 4Fe-4S dicluster domain A254_01365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A254_01365 PF10531 SLBB domain A254_01365 PF13183 4Fe-4S dicluster domain A254_01365 PF13375 RnfC Barrel sandwich hybrid domain A254_01366 PF03116 A254_01366 A254_01367 PF04205 FMN-binding domain A254_01368 PF02508 A254_01368 A254_01369 PF03658 RnfH family Ubiquitin A254_01370 PF00593 TonB dependent receptor A254_01370 PF07715 TonB-dependent Receptor Plug Domain A254_01371 PF00132 Bacterial transferase hexapeptide (six repeats) A254_01371 PF12464 Maltose acetyltransferase A254_01371 PF14602 Hexapeptide repeat of succinyl-transferase A254_01372 PF13419 Haloacid dehalogenase-like hydrolase A254_01373 PF13520 Amino acid permease A254_01374 PF00216 Bacterial DNA-binding protein A254_01375 PF02567 Phenazine biosynthesis-like protein A254_01376 PF00575 S1 RNA binding domain A254_01377 PF02224 Cytidylate kinase A254_01378 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A254_01379 PF09538 A254_01379 A254_01381 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_01381 PF03466 LysR substrate binding domain A254_01382 PF00920 Dehydratase family A254_01383 PF13231 A254_01383 A254_01384 PF00005 ABC transporter A254_01384 PF00664 ABC transporter transmembrane region A254_01388 PF00924 Mechanosensitive ion channel A254_01389 PF03992 Antibiotic biosynthesis monooxygenase A254_01390 PF03992 Antibiotic biosynthesis monooxygenase A254_01391 PF04332 A254_01391 A254_01393 PF01433 Peptidase family M1 A254_01393 PF11838 ERAP1-like C-terminal domain A254_01396 PF00248 Aldo/keto reductase family A254_01397 PF00107 Zinc-binding dehydrogenase A254_01397 PF08240 Alcohol dehydrogenase GroES-like domain A254_01398 PF00465 Iron-containing alcohol dehydrogenase A254_01399 PF00206 Lyase A254_01399 PF14698 Argininosuccinate lyase C-terminal A254_01401 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A254_01401 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A254_01402 PF00483 Nucleotidyl transferase A254_01403 PF01544 CorA-like Mg2+ transporter protein A254_01404 PF01471 Putative peptidoglycan binding domain A254_01404 PF03734 L,D-transpeptidase catalytic domain A254_01406 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A254_01407 PF13458 Periplasmic binding protein A254_01408 PF13525 Outer membrane lipoprotein A254_01409 PF01202 Shikimate kinase A254_01410 PF02447 A254_01410 A254_01411 PF00303 Thymidylate synthase A254_01412 PF00171 Aldehyde dehydrogenase family A254_01413 PF00175 Oxidoreductase NAD-binding domain A254_01413 PF00970 Oxidoreductase FAD-binding domain A254_01416 PF09394 Chagasin family peptidase inhibitor I42 A254_01417 PF04333 A254_01417 A254_01418 PF08241 Methyltransferase domain A254_01418 PF12840 Helix-turn-helix domain A254_01419 PF02219 Methylenetetrahydrofolate reductase A254_01420 PF02574 Homocysteine S-methyltransferase A254_01421 PF00809 Pterin binding enzyme A254_01421 PF02310 B12 binding domain A254_01421 PF02607 B12 binding domain A254_01421 PF02965 Vitamin B12 dependent methionine synthase, activation domain A254_01422 PF00149 Calcineurin-like phosphoesterase A254_01423 PF00009 Elongation factor Tu GTP binding domain A254_01423 PF00679 Elongation factor G C-terminus A254_01423 PF03144 Elongation factor Tu domain 2 A254_01423 PF06421 GTP-binding protein LepA C-terminus A254_01424 PF11730 A254_01424 A254_01425 PF06580 A254_01425 A254_01426 PF00072 Response regulator receiver domain A254_01426 PF04397 LytTr DNA-binding domain A254_01427 PF00534 Glycosyl transferases group 1 A254_01429 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_01429 PF03466 LysR substrate binding domain A254_01430 PF00578 AhpC/TSA family A254_01431 PF00132 Bacterial transferase hexapeptide (six repeats) A254_01432 PF10984 A254_01432 A254_01434 PF00155 Aminotransferase class I and II A254_01435 PF02617 ATP-dependent Clp protease adaptor protein ClpS A254_01436 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A254_01438 PF02578 Multi-copper polyphenol oxidoreductase laccase A254_01439 PF00107 Zinc-binding dehydrogenase A254_01439 PF08240 Alcohol dehydrogenase GroES-like domain A254_01440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A254_01441 PF01192 RNA polymerase Rpb6 A254_01442 PF00480 ROK family A254_01444 PF03544 Gram-negative bacterial TonB protein C-terminal A254_01445 PF01618 A254_01445 A254_01446 PF02472 Biopolymer transport protein ExbD/TolR A254_01447 PF02472 Biopolymer transport protein ExbD/TolR A254_01448 PF01165 Ribosomal protein S21 A254_01449 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A254_01449 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A254_01450 PF01594 A254_01450 A254_01451 PF00717 Peptidase S24-like A254_01452 PF01648 4'-phosphopantetheinyl transferase superfamily A254_01453 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A254_01454 PF00156 Phosphoribosyl transferase domain A254_01455 PF00085 Thioredoxin A254_01455 PF14559 Tetratricopeptide repeat A254_01455 PF14561 Tetratricopeptide repeat A254_01456 PF02190 ATP-dependent protease La (LON) domain A254_01457 PF01494 FAD binding domain A254_01458 PF01580 FtsK/SpoIIIE family A254_01458 PF09397 Ftsk gamma domain A254_01458 PF13491 A254_01458 A254_01459 PF03548 Outer membrane lipoprotein carrier protein LolA A254_01461 PF03372 Endonuclease/Exonuclease/phosphatase family A254_01462 PF00925 GTP cyclohydrolase II A254_01463 PF01638 HxlR-like helix-turn-helix A254_01464 PF08240 Alcohol dehydrogenase GroES-like domain A254_01464 PF13602 Zinc-binding dehydrogenase A254_01466 PF00593 TonB dependent receptor A254_01466 PF07715 TonB-dependent Receptor Plug Domain A254_01467 PF01264 Chorismate synthase A254_01468 PF13561 Enoyl-(Acyl carrier protein) reductase A254_01469 PF03631 A254_01469 A254_01470 PF00226 DnaJ domain A254_01470 PF01556 DnaJ C terminal domain A254_01471 PF01979 Amidohydrolase family A254_01473 PF00709 Adenylosuccinate synthetase A254_01474 PF13393 Histidyl-tRNA synthetase A254_01475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A254_01475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A254_01477 PF00710 Asparaginase A254_01478 PF00155 Aminotransferase class I and II A254_01479 PF02080 TrkA-C domain A254_01479 PF06826 A254_01479 A254_01480 PF06904 A254_01480 A254_01481 PF03641 Possible lysine decarboxylase A254_01482 PF00800 Prephenate dehydratase A254_01483 PF00633 Helix-hairpin-helix motif A254_01483 PF00730 HhH-GPD superfamily base excision DNA repair protein A254_01483 PF14815 NUDIX domain A254_01484 PF05258 A254_01484 A254_01485 PF13462 Thioredoxin A254_01486 PF00248 Aldo/keto reductase family A254_01491 PF03232 A254_01491 A254_01492 PF02600 Disulfide bond formation protein DsbB A254_01493 PF03572 Peptidase family S41 A254_01493 PF13180 PDZ domain A254_01494 PF01551 Peptidase family M23 A254_01495 PF02590 Predicted SPOUT methyltransferase A254_01496 PF02410 Oligomerisation domain A254_01497 PF01467 Cytidylyltransferase A254_01498 PF00171 Aldehyde dehydrogenase family A254_01500 PF00004 ATPase family associated with various cellular activities (AAA) A254_01500 PF01434 Peptidase family M41 A254_01501 PF01171 PP-loop family A254_01503 PF13413 Helix-turn-helix domain A254_01504 PF00578 AhpC/TSA family A254_01505 PF08241 Methyltransferase domain A254_01506 PF00696 Amino acid kinase family A254_01506 PF01842 ACT domain A254_01506 PF13840 ACT domain A254_01507 PF03060 Nitronate monooxygenase A254_01508 PF00391 PEP-utilising enzyme, mobile domain A254_01508 PF02896 PEP-utilising enzyme, TIM barrel domain A254_01508 PF05524 PEP-utilising enzyme, N-terminal A254_01508 PF13185 GAF domain A254_01509 PF00144 Beta-lactamase A254_01510 PF08450 SMP-30/Gluconolaconase/LRE-like region A254_01511 PF03167 Uracil DNA glycosylase superfamily A254_01512 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A254_01514 PF00270 DEAD/DEAH box helicase A254_01514 PF00271 Helicase conserved C-terminal domain A254_01514 PF02559 CarD-like/TRCF domain A254_01514 PF03461 TRCF domain A254_01515 PF00270 DEAD/DEAH box helicase A254_01515 PF00271 Helicase conserved C-terminal domain A254_01516 PF00579 tRNA synthetases class I (W and Y) A254_01517 PF03702 Uncharacterised protein family (UPF0075) A254_01520 PF00579 tRNA synthetases class I (W and Y) A254_01521 PF03023 A254_01521 A254_01522 PF02556 Preprotein translocase subunit SecB A254_01523 PF04280 Tim44-like domain A254_01525 PF03562 MltA specific insert domain A254_01525 PF06725 3D domain A254_01526 PF01713 Smr domain A254_01528 PF01546 Peptidase family M20/M25/M40 A254_01528 PF07687 Peptidase dimerisation domain A254_01529 PF00593 TonB dependent receptor A254_01529 PF07715 TonB-dependent Receptor Plug Domain A254_01532 PF03929 A254_01532 A254_01533 PF01926 50S ribosome-binding GTPase A254_01534 PF02096 60Kd inner membrane protein A254_01534 PF14849 YidC periplasmic domain A254_01535 PF00825 Ribonuclease P A254_01536 PF01078 Magnesium chelatase, subunit ChlI A254_01536 PF13335 A254_01536 A254_01536 PF13541 Subunit ChlI of Mg-chelatase A254_01537 PF00140 Sigma-70 factor, region 1 A254_01537 PF03979 Sigma-70 factor, region 1 A254_01537 PF04539 Sigma-70 region 3 A254_01537 PF04542 Sigma-70 region 2 A254_01537 PF04545 Sigma-70, region 4 A254_01537 PF04546 Sigma-70, non-essential region A254_01538 PF01807 CHC2 zinc finger A254_01538 PF08275 DNA primase catalytic core, N-terminal domain A254_01538 PF13662 Toprim domain A254_01540 PF09424 Yqey-like protein A254_01541 PF00117 Glutamine amidotransferase class-I A254_01541 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A254_01542 PF02142 MGS-like domain A254_01542 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A254_01542 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A254_01543 PF01272 Transcription elongation factor, GreA/GreB, C-term A254_01543 PF03449 Transcription elongation factor, N-terminal A254_01544 PF01694 Rhomboid family A254_01545 PF05494 Toluene tolerance, Ttg2 A254_01549 PF00113 Enolase, C-terminal TIM barrel domain A254_01549 PF03952 Enolase, N-terminal domain A254_01550 PF04977 Septum formation initiator A254_01551 PF00676 Dehydrogenase E1 component A254_01552 PF00364 Biotin-requiring enzyme A254_01552 PF02779 Transketolase, pyrimidine binding domain A254_01552 PF02780 Transketolase, C-terminal domain A254_01553 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase A254_01554 PF04273 Putative phosphatase (DUF442) A254_01555 PF00756 Putative esterase A254_01556 PF00075 RNase H A254_01557 PF01636 Phosphotransferase enzyme family A254_01558 PF03176 MMPL family A254_01559 PF02779 Transketolase, pyrimidine binding domain A254_01559 PF02780 Transketolase, C-terminal domain A254_01559 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A254_01560 PF00465 Iron-containing alcohol dehydrogenase A254_01561 PF05299 M61 glycyl aminopeptidase A254_01562 PF00842 Alanine racemase, C-terminal domain A254_01562 PF01168 Alanine racemase, N-terminal domain A254_01563 PF02405 A254_01563 A254_01564 PF00005 ABC transporter A254_01565 PF01588 Putative tRNA binding domain A254_01566 PF01925 A254_01566 A254_01567 PF00005 ABC transporter A254_01569 PF00210 Ferritin-like domain A254_01570 PF02463 RecF/RecN/SMC N terminal domain A254_01571 PF00204 DNA gyrase B A254_01571 PF00986 DNA gyrase B subunit, carboxyl terminus A254_01571 PF01751 Toprim domain A254_01571 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A254_01572 PF03167 Uracil DNA glycosylase superfamily A254_01573 PF03992 Antibiotic biosynthesis monooxygenase A254_01580 PF01738 Dienelactone hydrolase family A254_01581 PF13561 Enoyl-(Acyl carrier protein) reductase A254_01582 PF07690 Major Facilitator Superfamily A254_01583 PF00106 short chain dehydrogenase A254_01584 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A254_01584 PF03466 LysR substrate binding domain A254_01585 PF04261 Dyp-type peroxidase family A254_01586 PF10617 A254_01586 A254_01587 PF02322 A254_01587 A254_01588 PF01654 A254_01588 A254_01589 PF01228 Glycine radical A254_01589 PF02901 Pyruvate formate lyase A254_01590 PF04055 Radical SAM superfamily A254_01590 PF13353 4Fe-4S single cluster domain A254_01591 PF00593 TonB dependent receptor A254_01591 PF07715 TonB-dependent Receptor Plug Domain A254_01592 PF01636 Phosphotransferase enzyme family A254_01593 PF02694 A254_01593 A254_01594 PF04973 A254_01594 A254_01596 PF04338 Protein of unknown function, DUF481 A254_01597 PF00293 NUDIX domain A254_01598 PF00106 short chain dehydrogenase A254_01599 PF00156 Phosphoribosyl transferase domain A254_01599 PF13537 Glutamine amidotransferase domain A254_01600 PF04107 Glutamate-cysteine ligase family 2(GCS2) A254_01601 PF04452 RNA methyltransferase A254_01602 PF00586 AIR synthase related protein, N-terminal domain A254_01602 PF02769 AIR synthase related protein, C-terminal domain A254_01603 PF01029 NusB family A254_01604 PF00815 Histidinol dehydrogenase A254_01605 PF01634 ATP phosphoribosyltransferase A254_01606 PF01722 BolA-like protein A254_01607 PF13243 Prenyltransferase-like A254_01607 PF13249 Prenyltransferase-like A254_01608 PF00440 Bacterial regulatory proteins, tetR family A254_01609 PF00226 DnaJ domain A254_01610 PF07728 AAA domain (dynein-related subfamily) A254_01610 PF12556 A254_01610 A254_01611 PF06213 A254_01611 A254_01611 PF11775 A254_01611 A254_01612 PF00436 Single-strand binding protein family A254_01613 PF02421 Ferrous iron transport protein B A254_01613 PF07664 A254_01613 A254_01613 PF07670 Nucleoside recognition A254_01614 PF04023 FeoA domain A254_01615 PF02811 PHP domain A254_01615 PF07733 Bacterial DNA polymerase III alpha subunit A254_01615 PF14579 Helix-hairpin-helix motif A254_01616 PF03729 A254_01616 A254_01617 PF13507 CobB/CobQ-like glutamine amidotransferase domain A254_01618 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase A254_01619 PF00571 CBS domain A254_01619 PF01380 SIS domain A254_01620 PF13533 Biotin-lipoyl like A254_01621 PF00873 AcrB/AcrD/AcrF family A254_01622 PF00873 AcrB/AcrD/AcrF family A254_01623 PF02321 Outer membrane efflux protein A254_01624 PF00892 EamA-like transporter family A254_01625 PF00593 TonB dependent receptor A254_01625 PF07715 TonB-dependent Receptor Plug Domain A254_01627 PF09866 A254_01627 A254_01628 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A254_01628 PF14572 Phosphoribosyl synthetase-associated domain A254_01629 PF00459 Inositol monophosphatase family A254_01630 PF01632 Ribosomal protein L35 A254_01631 PF00453 Ribosomal protein L20 A254_01632 PF01409 tRNA synthetases class II core domain (F) A254_01632 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A254_01633 PF01588 Putative tRNA binding domain A254_01633 PF03147 Ferredoxin-fold anticodon binding domain A254_01633 PF03483 B3/4 domain A254_01633 PF03484 tRNA synthetase B5 domain A254_01634 PF00005 ABC transporter A254_01634 PF00664 ABC transporter transmembrane region A254_01635 PF13763 A254_01635 A254_01636 PF13847 Methyltransferase domain A254_01637 PF00472 RF-1 domain A254_01637 PF03462 PCRF domain A254_01638 PF03129 Anticodon binding domain A254_01638 PF13393 Histidyl-tRNA synthetase A254_01639 PF00719 Inorganic pyrophosphatase A254_01641 PF04386 Stringent starvation protein B A254_01642 PF00475 Imidazoleglycerol-phosphate dehydratase A254_01643 PF00117 Glutamine amidotransferase class-I A254_01644 PF00977 Histidine biosynthesis protein A254_01645 PF00977 Histidine biosynthesis protein A254_01646 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A254_01647 PF01230 HIT domain A254_01648 PF13520 Amino acid permease A254_01649 PF00311 Phosphoenolpyruvate carboxylase A254_01650 PF01923 Cobalamin adenosyltransferase A254_01651 PF00696 Amino acid kinase family A254_01652 PF09335 A254_01652 A254_01653 PF13505 Outer membrane protein beta-barrel domain A254_01654 PF13505 Outer membrane protein beta-barrel domain A254_01655 PF02348 Cytidylyltransferase A254_01656 PF00793 DAHP synthetase I family A254_01657 PF00563 EAL domain A254_01659 PF01966 HD domain A254_01660 PF13245 Part of AAA domain A254_01660 PF13361 UvrD-like helicase C-terminal domain A254_01661 PF00089 Trypsin A254_01661 PF03797 Autotransporter beta-domain A254_01662 PF00549 CoA-ligase A254_01662 PF08442 ATP-grasp domain A254_01663 PF01012 Electron transfer flavoprotein domain A254_01664 PF00766 Electron transfer flavoprotein FAD-binding domain A254_01664 PF01012 Electron transfer flavoprotein domain A254_01665 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A254_01667 PF00593 TonB dependent receptor A254_01667 PF07715 TonB-dependent Receptor Plug Domain A254_01669 PF00009 Elongation factor Tu GTP binding domain A254_01669 PF00679 Elongation factor G C-terminus A254_01670 PF01464 Transglycosylase SLT domain A254_01671 PF00561 alpha/beta hydrolase fold A254_01675 PF07690 Major Facilitator Superfamily A254_01676 PF01810 A254_01676 A254_01677 PF00239 Resolvase, N terminal domain A254_01677 PF02796 Helix-turn-helix domain of resolvase A254_01678 PF07690 Major Facilitator Superfamily A254_01679 PF06516 A254_01679 A254_01680 PF00875 DNA photolyase A254_01680 PF03441 FAD binding domain of DNA photolyase A254_01681 PF01232 Mannitol dehydrogenase Rossmann domain A254_01681 PF08125 Mannitol dehydrogenase C-terminal domain A254_01684 PF01963 A254_01684 A254_01685 PF02091 Glycyl-tRNA synthetase alpha subunit A254_01686 PF02092 A254_01686 A254_01686 PF05746 DALR anticodon binding domain A254_01687 PF01943 A254_01687 A254_01689 PF01266 FAD dependent oxidoreductase A254_01690 PF13609 Gram-negative porin A254_01691 PF00795 Carbon-nitrogen hydrolase A254_01692 PF01037 AsnC family A254_01692 PF13412 Winged helix-turn-helix DNA-binding A254_01693 PF01810 A254_01693 A254_01694 PF12100 A254_01694 A254_01695 PF00133 tRNA synthetases class I (I, L, M and V) A254_01695 PF08264 Anticodon-binding domain of tRNA A254_01695 PF13603 Leucyl-tRNA synthetase, Domain 2 A254_01696 PF04390 Lipopolysaccharide-assembly A254_01697 PF06144 DNA polymerase III, delta subunit A254_01698 PF04632 A254_01698 A254_01699 PF07869 A254_01699 A254_01700 PF13437 HlyD family secretion protein A254_01700 PF13533 Biotin-lipoyl like A254_01701 PF02321 Outer membrane efflux protein A254_01702 PF00781 Diacylglycerol kinase catalytic domain A254_01703 PF04002 RadC-like JAB domain A254_01704 PF02581 Thiamine monophosphate synthase/TENI A254_01705 PF00004 ATPase family associated with various cellular activities (AAA) A254_01705 PF02861 Clp amino terminal domain A254_01705 PF07724 AAA domain (Cdc48 subfamily) A254_01705 PF10431 C-terminal, D2-small domain, of ClpB protein A254_01706 PF00675 Insulinase (Peptidase family M16) A254_01706 PF05193 Peptidase M16 inactive domain A254_01707 PF00675 Insulinase (Peptidase family M16) A254_01707 PF05193 Peptidase M16 inactive domain A254_01708 PF02222 ATP-grasp domain A254_01709 PF00731 AIR carboxylase A254_01710 PF01040 UbiA prenyltransferase family A254_01711 PF00270 DEAD/DEAH box helicase A254_01711 PF00271 Helicase conserved C-terminal domain A254_01713 PF01106 NifU-like domain A254_01713 PF08712 Scaffold protein Nfu/NifU N terminal A254_01714 PF00814 Glycoprotease family A254_01715 PF13673 Acetyltransferase (GNAT) domain A254_01716 PF05443 ROS/MUCR transcriptional regulator protein A254_01717 PF01475 Ferric uptake regulator family A254_01718 PF00210 Ferritin-like domain A254_01719 PF00459 Inositol monophosphatase family A254_01720 PF00326 Prolyl oligopeptidase family A254_01720 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region A254_01721 PF01118 Semialdehyde dehydrogenase, NAD binding domain A254_01721 PF02774 Semialdehyde dehydrogenase, dimerisation domain A254_01722 PF00561 alpha/beta hydrolase fold A254_01723 PF00072 Response regulator receiver domain A254_01724 PF04542 Sigma-70 region 2 A254_01724 PF08281 Sigma-70, region 4 A254_01725 PF01551 Peptidase family M23 A254_01726 PF01521 Iron-sulphur cluster biosynthesis A254_01727 PF03372 Endonuclease/Exonuclease/phosphatase family A254_01729 PF04116 A254_01729 A254_01732 PF05013 N-formylglutamate amidohydrolase A254_01733 PF03739 A254_01733 A254_01734 PF03739 A254_01734 A254_01735 PF09912 A254_01735 A254_01736 PF00781 Diacylglycerol kinase catalytic domain A254_01738 PF02683 A254_01738 A254_01738 PF11412 Disulphide bond corrector protein DsbC A254_01738 PF13899 Thioredoxin-like A254_01739 PF01019 Gamma-glutamyltranspeptidase A254_01740 PF00072 Response regulator receiver domain A254_01740 PF00486 Transcriptional regulatory protein, C terminal A254_01742 PF05816 A254_01742 A254_01743 PF01926 50S ribosome-binding GTPase A254_01743 PF07650 KH domain A254_01744 PF00202 Aminotransferase class-III A254_01745 PF01636 Phosphotransferase enzyme family A254_01746 PF12625 A254_01746 A254_01746 PF12833 Helix-turn-helix domain A254_01747 PF13520 Amino acid permease A254_01748 PF07642 A254_01748 A254_01750 PF00035 Double-stranded RNA binding motif A254_01750 PF14622 Ribonuclease-III-like A254_01752 PF00106 short chain dehydrogenase A254_01754 PF00795 Carbon-nitrogen hydrolase A254_01755 PF04371 Porphyromonas-type peptidyl-arginine deiminase A254_01756 PF00163 Ribosomal protein S4/S9 N-terminal domain A254_01756 PF01479 S4 domain A254_01757 PF00990 GGDEF domain A254_01757 PF07494 Two component regulator propeller A254_01757 PF07495 Y_Y_Y domain A254_01758 PF04055 Radical SAM superfamily A254_01758 PF06969 HemN C-terminal domain A254_01762 PF00205 Thiamine pyrophosphate enzyme, central domain A254_01762 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A254_01762 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A254_01763 PF01649 Ribosomal protein S20 A254_01764 PF01638 HxlR-like helix-turn-helix A254_01766 PF10073 A254_01766 A254_01771 PF01402 Ribbon-helix-helix protein, copG family A254_01772 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A254_01773 PF08681 Protein of unknown function (DUF1778) A254_01774 PF13508 Acetyltransferase (GNAT) domain A254_01775 PF00171 Aldehyde dehydrogenase family A254_01776 PF07690 Major Facilitator Superfamily A254_01777 PF00593 TonB dependent receptor A254_01777 PF07715 TonB-dependent Receptor Plug Domain A254_01778 PF07690 Major Facilitator Superfamily A254_01779 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A254_01779 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A254_01781 PF01263 Aldose 1-epimerase A254_01782 PF01116 Fructose-bisphosphate aldolase class-II A254_01783 PF00294 pfkB family carbohydrate kinase A254_01784 PF00465 Iron-containing alcohol dehydrogenase A254_01785 PF00291 Pyridoxal-phosphate dependent enzyme A254_01786 PF01177 Asp/Glu/Hydantoin racemase A254_01787 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A254_01788 PF00873 AcrB/AcrD/AcrF family A254_01789 PF16576 A254_01789 A254_01790 PF00440 Bacterial regulatory proteins, tetR family A254_01791 PF02321 Outer membrane efflux protein A254_01792 PF00043 Glutathione S-transferase, C-terminal domain A254_01792 PF13409 Glutathione S-transferase, N-terminal domain A254_01793 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) A254_01793 PF04851 Type III restriction enzyme, res subunit A254_01793 PF12008 Type I restriction and modification enzyme - subunit R C terminal A254_01794 PF13166 A254_01794 A254_01795 PF01420 Type I restriction modification DNA specificity domain A254_01796 PF02384 N-6 DNA Methylase A254_01796 PF12161 HsdM N-terminal domain A254_01797 PF00589 Phage integrase family A254_01798 PF11185 A254_01798 A254_01800 PF04221 RelB antitoxin A254_01801 PF15738 A254_01801 A254_01802 PF13614 AAA domain A254_01804 PF00593 TonB dependent receptor A254_01804 PF07715 TonB-dependent Receptor Plug Domain A254_01805 PF16670 A254_01805 A254_01806 PF14072 A254_01806 A254_01808 PF02086 D12 class N6 adenine-specific DNA methyltransferase A254_01810 PF14487 A254_01810 A254_01811 PF01661 Macro domain A254_01814 PF10073 A254_01814 A254_01817 PF07927 YcfA-like protein A254_01818 PF15919 A254_01818 A254_01822 PF10073 A254_01822 A254_01823 PF10073 A254_01823 A254_01824 PF04606 A254_01824 A254_01826 PF05973 A254_01826 A254_01827 PF13744 Helix-turn-helix domain A254_01828 PF11950 A254_01828 A254_01831 PF01381 Helix-turn-helix A254_01831 PF06114 Domain of unknown function (DUF955) A254_01833 PF04221 RelB antitoxin A254_01834 PF15738 A254_01834 A254_01840 PF05954 Phage late control gene D protein (GPD) A254_01841 PF06995 A254_01841 A254_01842 PF10145 A254_01842 A254_01843 PF10109 A254_01843 A254_01844 PF04985 A254_01844 A254_01845 PF04984 Phage tail sheath protein A254_01845 PF17482 A254_01845 A254_01846 PF04965 Gene 25-like lysozyme A254_01848 PF04717 Phage-related baseplate assembly protein A254_01851 PF09684 A254_01851 A254_01852 PF04865 A254_01852 A254_01853 PF05069 A254_01853 A254_01854 PF06891 A254_01854 A254_01857 PF01510 N-acetylmuramoyl-L-alanine amidase A254_01859 PF05489 Phage Tail Protein X A254_01860 PF05926 A254_01860 A254_01861 PF05944 A254_01861 A254_01862 PF05125 A254_01862 A254_01863 PF05929 A254_01863 A254_01864 PF03237 Terminase-like family A254_01864 PF06056 Putative ATPase subunit of terminase (gpP-like) A254_01864 PF17289 A254_01864 A254_01865 PF04860 Phage portal protein A254_01867 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A254_01868 PF15738 A254_01868 A254_01869 PF04221 RelB antitoxin A254_01875 PF10073 A254_01875 A254_01884 PF03583 Secretory lipase A254_01886 PF00005 ABC transporter A254_01887 PF00005 ABC transporter A254_01888 PF00005 ABC transporter A254_01888 PF00664 ABC transporter transmembrane region A254_01889 PF00593 TonB dependent receptor A254_01889 PF07715 TonB-dependent Receptor Plug Domain A254_01890 PF12833 Helix-turn-helix domain A254_01892 PF07015 VirC1 protein A254_01893 PF13561 Enoyl-(Acyl carrier protein) reductase A254_01894 PF00593 TonB dependent receptor A254_01894 PF07715 TonB-dependent Receptor Plug Domain A254_01895 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A254_01896 PF09274 ParG A254_01897 PF02661 Fic/DOC family A254_01899 PF08965 Domain of unknown function (DUF1870) A254_01901 PF04365 Protein of unknown function (DUF497) A254_01910 PF10073 A254_01910 A254_01912 PF14488 Domain of unknown function (DUF4434) A254_01913 PF13283 A254_01913 A254_01914 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A254_01914 PF13632 Glycosyl transferase family group 2 A254_01915 PF02350 UDP-N-acetylglucosamine 2-epimerase A254_01916 PF13671 AAA domain A254_01920 PF12951 A254_01920 A254_10001 PF03884 Domain of unknown function (DUF329) A254_10004 PF02021 Uncharacterised protein family UPF0102 A254_10006 PF13586 A254_10006 A254_10008 PF04324 BFD-like [2Fe-2S] binding domain A254_10010 PF13586 A254_10010 A254_10011 PF13340 A254_10011