A254_00001	SM00382	ATPases associated with a variety of cellular activities
A254_00001	SM00760	Bacterial dnaA protein helix-turn-helix domain
A254_00002	SM00382	ATPases associated with a variety of cellular activities
A254_00007	SM00852	Probable molybdopterin binding domain
A254_00020	SM00867	YceI-like domain 
A254_00023	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A254_00028	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A254_00028	SM00387	Histidine kinase-like ATPases
A254_00028	SM00388	His Kinase A (phosphoacceptor) domain
A254_00029	SM00448	cheY-homologous receiver domain
A254_00029	SM00862	Transcriptional regulatory protein, C terminal
A254_00030	SM00116	Domain in cystathionine beta-synthase and other proteins.
A254_00030	SM01240	A254_00030
A254_00037	SM00650	Ribosomal RNA adenine dimethylases
A254_00060	SM00354	helix_turn _helix lactose operon repressor
A254_00062	SM00825	Beta-ketoacyl synthase
A254_00074	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A254_00075	SM00382	ATPases associated with a variety of cellular activities
A254_00077	SM00062	Bacterial periplasmic substrate-binding proteins
A254_00092	SM00855	Phosphoglycerate mutase family
A254_00094	SM00829	Enoylreductase
A254_00096	SM00861	Transketolase, pyrimidine binding domain
A254_00101	SM00028	Tetratricopeptide repeats
A254_00107	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A254_00111	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A254_00112	SM00822	A254_00112
A254_00120	SM00487	DEAD-like helicases superfamily
A254_00120	SM00490	helicase superfamily c-terminal domain
A254_00138	SM01207	A254_00138
A254_00140	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A254_00140	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A254_00140	SM00493	A254_00140
A254_00147	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A254_00147	SM01232	A254_00147
A254_00149	SM00986	Uracil DNA glycosylase superfamily
A254_00149	SM00987	UreE urease accessory protein, C-terminal domain 
A254_00151	SM00028	Tetratricopeptide repeats
A254_00157	SM00448	cheY-homologous receiver domain
A254_00157	SM00862	Transcriptional regulatory protein, C terminal
A254_00158	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A254_00158	SM00387	Histidine kinase-like ATPases
A254_00158	SM00388	His Kinase A (phosphoacceptor) domain
A254_00165	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A254_00166	SM00382	ATPases associated with a variety of cellular activities
A254_00168	SM00448	cheY-homologous receiver domain
A254_00168	SM00862	Transcriptional regulatory protein, C terminal
A254_00170	SM00387	Histidine kinase-like ATPases
A254_00170	SM00388	His Kinase A (phosphoacceptor) domain
A254_00182	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A254_00184	SM00935	Outer membrane protein (OmpH-like)
A254_00188	SM01059	Chloramphenicol acetyltransferase
A254_00195	SM01235	A254_00195
A254_00198	SM00947	Carbonic anhydrase
A254_00199	SM00729	Elongator protein 3, MiaB family, Radical SAM
A254_00206	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A254_00206	SM00387	Histidine kinase-like ATPases
A254_00206	SM00388	His Kinase A (phosphoacceptor) domain
A254_00207	SM00382	ATPases associated with a variety of cellular activities
A254_00207	SM00448	cheY-homologous receiver domain
A254_00209	SM00411	bacterial (prokaryotic) histone like domain
A254_00210	SM00422	helix_turn_helix, mercury resistance
A254_00216	SM00986	Uracil DNA glycosylase superfamily
A254_00216	SM00987	UreE urease accessory protein, C-terminal domain 
A254_00221	SM00344	helix_turn_helix ASNC type
A254_00222	SM00388	His Kinase A (phosphoacceptor) domain
A254_00224	SM00388	His Kinase A (phosphoacceptor) domain
A254_00230	SM00316	Ribosomal protein S1-like RNA-binding domain
A254_00230	SM00955	A254_00230
A254_00237	SM00936	Penicillin-binding protein 5, C-terminal domain 
A254_00241	SM00028	Tetratricopeptide repeats
A254_00251	SM00382	ATPases associated with a variety of cellular activities
A254_00251	SM00962	SRP54-type protein, GTPase domain
A254_00251	SM00963	SRP54-type protein, helical bundle domain
A254_00253	SM00729	Elongator protein 3, MiaB family, Radical SAM
A254_00254	SM00382	ATPases associated with a variety of cellular activities
A254_00254	SM00962	SRP54-type protein, GTPase domain
A254_00254	SM00963	SRP54-type protein, helical bundle domain
A254_00256	SM00271	DnaJ molecular chaperone homology domain
A254_00264	SM00382	ATPases associated with a variety of cellular activities
A254_00266	SM00905	Dihydroneopterin aldolase
A254_00269	SM00052	Putative diguanylate phosphodiesterase
A254_00269	SM00267	diguanylate cyclase
A254_00270	SM00434	DNA Topoisomerase IV
A254_00272	SM00382	ATPases associated with a variety of cellular activities
A254_00286	SM00054	EF-hand, calcium binding motif
A254_00290	SM00382	ATPases associated with a variety of cellular activities
A254_00300	SM00382	ATPases associated with a variety of cellular activities
A254_00303	SM00316	Ribosomal protein S1-like RNA-binding domain
A254_00330	SM00257	Lysin motif
A254_00333	SM00382	ATPases associated with a variety of cellular activities
A254_00334	SM00480	DNA polymerase III beta subunit
A254_00341	SM00729	Elongator protein 3, MiaB family, Radical SAM
A254_00361	SM00382	ATPases associated with a variety of cellular activities
A254_00361	SM00994	ClpX C4-type zinc finger
A254_00361	SM01086	C-terminal, D2-small domain, of ClpB protein
A254_00368	SM00640	Glycosyl hydrolases family 32
A254_00371	SM00347	helix_turn_helix multiple antibiotic resistance protein
A254_00385	SM00357	Cold shock protein domain
A254_00386	SM00957	SecA DEAD-like domain
A254_00386	SM00958	SecA preprotein cross-linking domain
A254_00391	SM00267	diguanylate cyclase
A254_00392	SM01060	A254_00392
A254_00401	SM00382	ATPases associated with a variety of cellular activities
A254_00407	SM01029	Beta-galactosidase, domain 2
A254_00408	SM00917	LeuA allosteric (dimerisation) domain
A254_00418	SM00487	DEAD-like helicases superfamily
A254_00418	SM00491	A254_00418
A254_00421	SM00857	Resolvase, N terminal domain
A254_00426	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A254_00427	SM00260	Two component signalling adaptor domain
A254_00427	SM00387	Histidine kinase-like ATPases
A254_00428	SM00448	cheY-homologous receiver domain
A254_00441	SM00382	ATPases associated with a variety of cellular activities
A254_00445	SM00382	ATPases associated with a variety of cellular activities
A254_00455	SM00382	ATPases associated with a variety of cellular activities
A254_00459	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A254_00461	SM00836	DALR anticodon binding domain
A254_00461	SM01016	Arginyl tRNA synthetase N terminal dom
A254_00462	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A254_00464	SM00028	Tetratricopeptide repeats
A254_00465	SM00864	Tubulin/FtsZ family, GTPase domain
A254_00465	SM00865	Tubulin/FtsZ family, C-terminal domain
A254_00466	SM00842	Cell division protein FtsA
A254_00483	SM00984	UDP binding domain
A254_00491	SM01152	A254_00491
A254_00492	SM00729	Elongator protein 3, MiaB family, Radical SAM
A254_00495	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A254_00498	SM00382	ATPases associated with a variety of cellular activities
A254_00513	SM00732	Likely ribonuclease with RNase H fold.
A254_00516	SM00845	GatB domain
A254_00521	SM00849	Metallo-beta-lactamase superfamily
A254_00525	SM00116	Domain in cystathionine beta-synthase and other proteins.
A254_00525	SM00924	MgtE intracellular N domain
A254_00529	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A254_00530	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A254_00532	SM00028	Tetratricopeptide repeats
A254_00534	SM00849	Metallo-beta-lactamase superfamily
A254_00536	SM00028	Tetratricopeptide repeats
A254_00537	SM00028	Tetratricopeptide repeats
A254_00541	SM00232	JAB/MPN domain
A254_00542	SM00363	S4 RNA-binding domain
A254_00556	SM00878	Biotin carboxylase C-terminal domain
A254_00559	SM00663	RNA polymerase I subunit A N-terminus
A254_00564	SM00649	Ribosomal protein L11/L12
A254_00565	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A254_00565	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A254_00570	SM01130	A254_00570
A254_00575	SM00474	3'-5' exonuclease
A254_00583	SM00478	endonuclease III
A254_00583	SM00525	A254_00583
A254_00595	SM00434	DNA Topoisomerase IV
A254_00608	SM01329	A254_00608
A254_00613	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A254_00613	SM00465	GIY-YIG type nucleases (URI domain)
A254_00623	SM00998	Adenylosuccinate lyase C-terminus
A254_00624	SM00271	DnaJ molecular chaperone homology domain
A254_00631	SM00636	A254_00631
A254_00645	SM00382	ATPases associated with a variety of cellular activities
A254_00650	SM00382	ATPases associated with a variety of cellular activities
A254_00675	SM00387	Histidine kinase-like ATPases
A254_00675	SM00388	His Kinase A (phosphoacceptor) domain
A254_00675	SM00448	cheY-homologous receiver domain
A254_00685	SM00382	ATPases associated with a variety of cellular activities
A254_00687	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A254_00695	SM00363	S4 RNA-binding domain
A254_00699	SM00382	ATPases associated with a variety of cellular activities
A254_00705	SM00881	CoA binding domain
A254_00707	SM00487	DEAD-like helicases superfamily
A254_00707	SM00490	helicase superfamily c-terminal domain
A254_00707	SM00847	Helicase associated domain (HA2)  Add an annotation
A254_00709	SM00830	Chorismate mutase type II
A254_00714	SM00316	Ribosomal protein S1-like RNA-binding domain
A254_00720	SM01387	A254_00720
A254_00721	SM00316	Ribosomal protein S1-like RNA-binding domain
A254_00721	SM00322	K homology RNA-binding domain
A254_00726	SM01329	A254_00726
A254_00730	SM00662	RNA polymerases D
A254_00743	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A254_00744	SM01374	A254_00744
A254_00748	SM00322	K homology RNA-binding domain
A254_00751	SM01382	A254_00751
A254_00751	SM01383	A254_00751
A254_00755	SM01403	A254_00755
A254_00757	SM00838	Elongation factor G C-terminus
A254_00757	SM00889	Elongation factor G, domain IV
A254_00760	SM00014	Acid phosphatase homologues
A254_00779	SM01230	A254_00779
A254_00780	SM00938	Nitrogen regulatory protein P-II
A254_00793	SM00387	Histidine kinase-like ATPases
A254_00793	SM01080	A254_00793
A254_00794	SM00257	Lysin motif
A254_00795	SM00448	cheY-homologous receiver domain
A254_00795	SM00862	Transcriptional regulatory protein, C terminal
A254_00811	SM00382	ATPases associated with a variety of cellular activities
A254_00812	SM00344	helix_turn_helix ASNC type
A254_00816	SM00564	beta-propeller repeat
A254_00833	SM00072	Guanylate kinase homologues.
A254_00846	SM00563	Phosphate acyltransferases
A254_00849	SM00382	ATPases associated with a variety of cellular activities
A254_00853	SM00387	Histidine kinase-like ATPases
A254_00853	SM00433	TopoisomeraseII
A254_00859	SM00382	ATPases associated with a variety of cellular activities
A254_00859	SM01086	C-terminal, D2-small domain, of ClpB protein
A254_00863	SM00052	Putative diguanylate phosphodiesterase
A254_00863	SM00267	diguanylate cyclase
A254_00884	SM00478	endonuclease III
A254_00892	SM00344	helix_turn_helix ASNC type
A254_00898	SM00292	breast cancer carboxy-terminal domain
A254_00898	SM00532	Ligase N family
A254_00900	SM00487	DEAD-like helicases superfamily
A254_00900	SM00490	helicase superfamily c-terminal domain
A254_00907	SM00853	MutL C terminal dimerisation domain
A254_00907	SM01340	A254_00907
A254_00922	SM00271	DnaJ molecular chaperone homology domain
A254_00927	SM00841	Elongation factor P, C-terminal
A254_00927	SM01185	A254_00927
A254_00928	SM00450	Rhodanese Homology Domain
A254_00933	SM00904	Riboflavin kinase
A254_00936	SM00773	Proposed nucleic acid binding domain
A254_00939	SM00155	Phospholipase D. Active site motifs.
A254_00946	SM00886	Stress responsive A/B Barrel Domain
A254_00951	SM01209	A254_00951
A254_00951	SM01210	A254_00951
A254_00953	SM01091	Transporter associated domain
A254_00966	SM00357	Cold shock protein domain
A254_00967	SM00474	3'-5' exonuclease
A254_00970	SM00382	ATPases associated with a variety of cellular activities
A254_00984	SM00382	ATPases associated with a variety of cellular activities
A254_00985	SM00387	Histidine kinase-like ATPases
A254_00986	SM00448	cheY-homologous receiver domain
A254_00986	SM00862	Transcriptional regulatory protein, C terminal
A254_00989	SM00382	ATPases associated with a variety of cellular activities
A254_00993	SM00448	cheY-homologous receiver domain
A254_00995	SM00382	ATPases associated with a variety of cellular activities
A254_00995	SM01086	C-terminal, D2-small domain, of ClpB protein
A254_00997	SM00411	bacterial (prokaryotic) histone like domain
A254_01000	SM00382	ATPases associated with a variety of cellular activities
A254_01005	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A254_01008	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A254_01010	SM00382	ATPases associated with a variety of cellular activities
A254_01013	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A254_01013	SM00474	3'-5' exonuclease
A254_01013	SM00475	5'-3' exonuclease
A254_01013	SM00482	DNA polymerase A domain
A254_01019	SM01058	CarD-like/TRCF domain
A254_01021	SM00490	helicase superfamily c-terminal domain
A254_01025	SM00869	Autotransporter beta-domain
A254_01030	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A254_01033	SM00422	helix_turn_helix, mercury resistance
A254_01034	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A254_01034	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A254_01038	SM00937	A254_01038
A254_01041	SM00646	A254_01041
A254_01044	SM00316	Ribosomal protein S1-like RNA-binding domain
A254_01054	SM00382	ATPases associated with a variety of cellular activities
A254_01055	SM00996	S-adenosyl-L-homocysteine hydrolase
A254_01055	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A254_01057	SM01133	A254_01057
A254_01059	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A254_01060	SM00861	Transketolase, pyrimidine binding domain
A254_01073	SM00382	ATPases associated with a variety of cellular activities
A254_01076	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A254_01086	SM00382	ATPases associated with a variety of cellular activities
A254_01088	SM00226	Low molecular weight phosphatase family
A254_01090	SM00671	Sel1-like repeats.
A254_01091	SM00671	Sel1-like repeats.
A254_01092	SM00671	Sel1-like repeats.
A254_01093	SM00671	Sel1-like repeats.
A254_01094	SM00671	Sel1-like repeats.
A254_01095	SM00671	Sel1-like repeats.
A254_01096	SM00671	Sel1-like repeats.
A254_01097	SM00671	Sel1-like repeats.
A254_01099	SM00014	Acid phosphatase homologues
A254_01107	SM00382	ATPases associated with a variety of cellular activities
A254_01118	SM00382	ATPases associated with a variety of cellular activities
A254_01131	SM00729	Elongator protein 3, MiaB family, Radical SAM
A254_01131	SM00876	Biotin and Thiamin Synthesis associated domain
A254_01136	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A254_01136	SM00954	Region found in RelA / SpoT proteins
A254_01137	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A254_01139	SM00073	Histidine Phosphotransfer domain
A254_01139	SM00260	Two component signalling adaptor domain
A254_01139	SM00387	Histidine kinase-like ATPases
A254_01139	SM01231	A254_01139
A254_01140	SM00138	Methyltransferase, chemotaxis proteins 
A254_01141	SM00448	cheY-homologous receiver domain
A254_01143	SM00448	cheY-homologous receiver domain
A254_01144	SM00260	Two component signalling adaptor domain
A254_01145	SM00729	Elongator protein 3, MiaB family, Radical SAM
A254_01148	SM01091	Transporter associated domain
A254_01152	SM00671	Sel1-like repeats.
A254_01161	SM00347	helix_turn_helix multiple antibiotic resistance protein
A254_01166	SM00671	Sel1-like repeats.
A254_01171	SM00479	A254_01171
A254_01175	SM00248	ankyrin repeats
A254_01178	SM00671	Sel1-like repeats.
A254_01180	SM00798	AICARFT/IMPCHase bienzyme
A254_01180	SM00851	MGS-like domain
A254_01181	SM00671	Sel1-like repeats.
A254_01183	SM00344	helix_turn_helix ASNC type
A254_01194	SM00729	Elongator protein 3, MiaB family, Radical SAM
A254_01208	SM00357	Cold shock protein domain
A254_01208	SM00382	ATPases associated with a variety of cellular activities
A254_01208	SM00959	Rho termination factor, N-terminal domain
A254_01209	SM00829	Enoylreductase
A254_01216	SM01228	A254_01216
A254_01219	SM00470	ParB-like nuclease domain
A254_01227	SM00671	Sel1-like repeats.
A254_01233	SM00387	Histidine kinase-like ATPases
A254_01240	SM00919	Malic enzyme, NAD binding domain
A254_01240	SM01274	A254_01240
A254_01242	SM00883	Chaperonin 10 Kd subunit
A254_01248	SM00487	DEAD-like helicases superfamily
A254_01262	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A254_01262	SM00534	ATPase domain of DNA mismatch repair MUTS family
A254_01274	SM01323	A254_01274
A254_01291	SM01004	Delta-aminolevulinic acid dehydratase
A254_01304	SM00849	Metallo-beta-lactamase superfamily
A254_01324	SM00953	A254_01324
A254_01326	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A254_01327	SM01130	A254_01327
A254_01333	SM00382	ATPases associated with a variety of cellular activities
A254_01361	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A254_01361	SM00382	ATPases associated with a variety of cellular activities
A254_01367	SM00900	A254_01367
A254_01371	SM01266	A254_01371
A254_01374	SM00411	bacterial (prokaryotic) histone like domain
A254_01376	SM00316	Ribosomal protein S1-like RNA-binding domain
A254_01384	SM00382	ATPases associated with a variety of cellular activities
A254_01397	SM00829	Enoylreductase
A254_01418	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A254_01421	SM01018	B12 binding domain
A254_01423	SM00838	Elongation factor G C-terminus
A254_01426	SM00448	cheY-homologous receiver domain
A254_01426	SM00850	LytTr DNA-binding domain
A254_01439	SM00829	Enoylreductase
A254_01441	SM01409	A254_01441
A254_01456	SM00464	Found in ATP-dependent protease La (LON)
A254_01458	SM00843	A254_01458
A254_01464	SM00829	Enoylreductase
A254_01470	SM00271	DnaJ molecular chaperone homology domain
A254_01473	SM00788	Adenylosuccinate synthetase
A254_01477	SM00870	A254_01477
A254_01483	SM00478	endonuclease III
A254_01493	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A254_01493	SM00245	tail specific protease
A254_01500	SM00382	ATPases associated with a variety of cellular activities
A254_01503	SM00530	Helix-turn-helix XRE-family like proteins 
A254_01508	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A254_01511	SM00986	Uracil DNA glycosylase superfamily
A254_01511	SM00987	UreE urease accessory protein, C-terminal domain 
A254_01514	SM00487	DEAD-like helicases superfamily
A254_01514	SM00490	helicase superfamily c-terminal domain
A254_01514	SM00982	A254_01514
A254_01514	SM01058	CarD-like/TRCF domain
A254_01515	SM00487	DEAD-like helicases superfamily
A254_01515	SM00490	helicase superfamily c-terminal domain
A254_01523	SM00978	A254_01523
A254_01525	SM00925	MltA specific insert domain
A254_01536	SM00382	ATPases associated with a variety of cellular activities
A254_01538	SM00400	zinc finger
A254_01538	SM00493	A254_01538
A254_01541	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A254_01542	SM00851	MGS-like domain
A254_01542	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A254_01549	SM01192	A254_01549
A254_01549	SM01193	A254_01549
A254_01552	SM00861	Transketolase, pyrimidine binding domain
A254_01559	SM00861	Transketolase, pyrimidine binding domain
A254_01562	SM01005	Alanine racemase, C-terminal domain
A254_01564	SM00382	ATPases associated with a variety of cellular activities
A254_01571	SM00387	Histidine kinase-like ATPases
A254_01571	SM00433	TopoisomeraseII
A254_01572	SM00986	Uracil DNA glycosylase superfamily
A254_01572	SM00987	UreE urease accessory protein, C-terminal domain 
A254_01583	SM00822	A254_01583
A254_01609	SM00271	DnaJ molecular chaperone homology domain
A254_01614	SM00899	A254_01614
A254_01615	SM00481	DNA polymerase alpha chain like domain
A254_01617	SM01211	A254_01617
A254_01619	SM00116	Domain in cystathionine beta-synthase and other proteins.
A254_01628	SM01400	A254_01628
A254_01633	SM00873	B3/4 domain
A254_01633	SM00874	tRNA synthetase B5 domain
A254_01633	SM00896	Ferredoxin-fold anticodon binding domain
A254_01634	SM00382	ATPases associated with a variety of cellular activities
A254_01637	SM00937	A254_01637
A254_01657	SM00052	Putative diguanylate phosphodiesterase
A254_01659	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A254_01661	SM00020	Trypsin-like serine protease
A254_01661	SM00869	Autotransporter beta-domain
A254_01663	SM00893	Electron transfer flavoprotein domain
A254_01664	SM00893	Electron transfer flavoprotein domain
A254_01677	SM00857	Resolvase, N terminal domain
A254_01692	SM00344	helix_turn_helix ASNC type
A254_01702	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A254_01705	SM00382	ATPases associated with a variety of cellular activities
A254_01705	SM01086	C-terminal, D2-small domain, of ClpB protein
A254_01709	SM01001	AIR carboxylase
A254_01711	SM00487	DEAD-like helicases superfamily
A254_01711	SM00490	helicase superfamily c-terminal domain
A254_01713	SM00932	Scaffold protein Nfu/NifU N terminal
A254_01721	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A254_01723	SM00448	cheY-homologous receiver domain
A254_01736	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A254_01740	SM00448	cheY-homologous receiver domain
A254_01740	SM00862	Transcriptional regulatory protein, C terminal
A254_01746	SM00342	helix_turn_helix, arabinose operon control protein
A254_01750	SM00358	Double-stranded RNA binding motif
A254_01750	SM00535	Ribonuclease III family
A254_01756	SM00363	S4 RNA-binding domain
A254_01756	SM01390	A254_01756
A254_01757	SM00267	diguanylate cyclase
A254_01758	SM00729	Elongator protein 3, MiaB family, Radical SAM
A254_01793	SM00487	DEAD-like helicases superfamily
A254_01811	SM00506	Appr-1"-p processing enzyme
A254_01831	SM00530	Helix-turn-helix XRE-family like proteins 
A254_01857	SM00644	A254_01857
A254_01886	SM00382	ATPases associated with a variety of cellular activities
A254_01887	SM00382	ATPases associated with a variety of cellular activities
A254_01888	SM00382	ATPases associated with a variety of cellular activities
A254_01890	SM00342	helix_turn_helix, arabinose operon control protein
A254_01893	SM00822	A254_01893
A254_01920	SM00869	Autotransporter beta-domain
