locus-tag class description ZMO0001 PF00593 TonB dependent receptor ZMO0001 PF07715 TonB-dependent Receptor Plug Domain ZMO0002 PF00155 Aminotransferase class I and II ZMO0004 PF00009 Elongation factor Tu GTP binding domain ZMO0005 PF01507 Phosphoadenosine phosphosulfate reductase family ZMO0006 PF10414 Sirohaem synthase dimerisation region ZMO0006 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ZMO0007 PF01507 Phosphoadenosine phosphosulfate reductase family ZMO0008 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ZMO0008 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ZMO0009 PF00667 FAD binding domain ZMO0009 PF00258 Flavodoxin ZMO0009 PF00175 Oxidoreductase NAD-binding domain ZMO0012 PF04055 Radical SAM superfamily ZMO0012 PF06969 HemN C-terminal domain ZMO0013 PF01725 Ham1 family ZMO0014 PF01138 3' exoribonuclease family, domain 1 ZMO0014 PF03725 3' exoribonuclease family, domain 2 ZMO0015 PF01628 HrcA protein C terminal domain ZMO0016 PF01025 GrpE ZMO0017 PF01029 NusB family ZMO0017 PF01189 16S rRNA methyltransferase RsmB/F ZMO0018 PF00834 Ribulose-phosphate 3 epimerase family ZMO0021 PF11870 Domain of unknown function (DUF3390) ZMO0021 PF02589 LUD domain ZMO0021 PF13183 4Fe-4S dicluster domain ZMO0022 PF02754 Cysteine-rich domain ZMO0027 PF01808 AICARFT/IMPCHase bienzyme ZMO0027 PF02142 MGS-like domain ZMO0028 PF04471 Restriction endonuclease ZMO0028 PF14338 Mrr N-terminal domain ZMO0030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ZMO0033 PF03692 Putative zinc- or iron-chelating domain ZMO0037 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ZMO0038 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ZMO0038 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ZMO0039 PF00929 Exonuclease ZMO0040 PF01121 Dephospho-CoA kinase ZMO0041 PF01488 Shikimate / quinate 5-dehydrogenase ZMO0041 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ZMO0041 PF08501 Shikimate dehydrogenase substrate binding domain ZMO0043 PF02545 Maf-like protein ZMO0047 PF01810 LysE type translocator ZMO0050 PF03466 LysR substrate binding domain ZMO0050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO0052 PF07690 Major Facilitator Superfamily ZMO0053 PF00561 alpha/beta hydrolase fold ZMO0054 PF01047 MarR family ZMO0055 PF01925 Sulfite exporter TauE/SafE ZMO0056 PF01380 SIS domain ZMO0059 PF02595 Glycerate kinase family ZMO0070 PF13417 Glutathione S-transferase, N-terminal domain ZMO0070 PF04399 Glutaredoxin 2, C terminal domain ZMO0072 PF07995 Glucose / Sorbosone dehydrogenase ZMO0073 PF00571 CBS domain ZMO0073 PF03471 Transporter associated domain ZMO0074 PF02130 Uncharacterized protein family UPF0054 ZMO0075 PF02562 PhoH-like protein ZMO0077 PF00919 Uncharacterized protein family UPF0004 ZMO0077 PF01938 TRAM domain ZMO0077 PF04055 Radical SAM superfamily ZMO0078 PF01584 CheW-like domain ZMO0080 PF03975 CheD chemotactic sensory transduction ZMO0081 PF00072 Response regulator receiver domain ZMO0081 PF01339 CheB methylesterase ZMO0082 PF01739 CheR methyltransferase, SAM binding domain ZMO0082 PF03705 CheR methyltransferase, all-alpha domain ZMO0083 PF01627 Hpt domain ZMO0083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO0083 PF02895 Signal transducing histidine kinase, homodimeric domain ZMO0083 PF01584 CheW-like domain ZMO0085 PF02203 Tar ligand binding domain homologue ZMO0085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ZMO0085 PF00672 HAMP domain ZMO0086 PF04607 Region found in RelA / SpoT proteins ZMO0086 PF02824 TGS domain ZMO0086 PF13291 ACT domain ZMO0090 PF00106 short chain dehydrogenase ZMO0094 PF06968 Biotin and Thiamin Synthesis associated domain ZMO0094 PF04055 Radical SAM superfamily ZMO0096 PF01066 CDP-alcohol phosphatidyltransferase ZMO0103 PF00144 Beta-lactamase ZMO0103 PF11954 Domain of unknown function (DUF3471) ZMO0105 PF00330 Aconitase family (aconitate hydratase) ZMO0106 PF00694 Aconitase C-terminal domain ZMO0108 PF00893 Small Multidrug Resistance protein ZMO0113 PF00425 chorismate binding enzyme ZMO0113 PF04715 Anthranilate synthase component I, N terminal region ZMO0114 PF00117 Glutamine amidotransferase class-I ZMO0114 PF02885 Glycosyl transferase family, helical bundle domain ZMO0114 PF00591 Glycosyl transferase family, a/b domain ZMO0115 PF01063 Amino-transferase class IV ZMO0116 PF02082 Transcriptional regulator ZMO0117 PF03063 Prismane/CO dehydrogenase family ZMO0119 PF06965 Na+/H+ antiporter 1 ZMO0121 PF00004 ATPase family associated with various cellular activities (AAA) ZMO0121 PF12002 MgsA AAA+ ATPase C terminal ZMO0121 PF16193 AAA C-terminal domain ZMO0125 PF04073 Aminoacyl-tRNA editing domain ZMO0130 PF01569 PAP2 superfamily ZMO0140 PF01451 Low molecular weight phosphotyrosine protein phosphatase ZMO0142 PF01168 Alanine racemase, N-terminal domain ZMO0143 PF00005 ABC transporter ZMO0144 PF02910 Fumarate reductase flavoprotein C-term ZMO0144 PF00890 FAD binding domain ZMO0149 PF02390 Putative methyltransferase ZMO0152 PF02887 Pyruvate kinase, alpha/beta domain ZMO0152 PF00224 Pyruvate kinase, barrel domain ZMO0153 PF01709 Transcriptional regulator ZMO0154 PF02075 Crossover junction endodeoxyribonuclease RuvC ZMO0155 PF07499 RuvA, C-terminal domain ZMO0155 PF01330 RuvA N terminal domain ZMO0157 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ZMO0157 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ZMO0158 PF17864 RuvB AAA lid domain ZMO0158 PF05496 Holliday junction DNA helicase RuvB P-loop domain ZMO0158 PF05491 RuvB C-terminal winged helix domain ZMO0160 PF03061 Thioesterase superfamily ZMO0161 PF01618 MotA/TolQ/ExbB proton channel family ZMO0162 PF02472 Biopolymer transport protein ExbD/TolR ZMO0165 PF07676 WD40-like Beta Propeller Repeat ZMO0165 PF04052 TolB amino-terminal domain ZMO0166 PF00691 OmpA family ZMO0170 PF03009 Glycerophosphoryl diester phosphodiesterase family ZMO0172 PF01964 Radical SAM ThiC family ZMO0172 PF13667 ThiC-associated domain ZMO0176 PF00456 Transketolase, thiamine diphosphate binding domain ZMO0176 PF02780 Transketolase, C-terminal domain ZMO0176 PF02779 Transketolase, pyrimidine binding domain ZMO0177 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ZMO0177 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ZMO0178 PF00162 Phosphoglycerate kinase ZMO0179 PF01791 DeoC/LacD family aldolase ZMO0180 PF04551 GcpE protein ZMO0182 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ZMO0182 PF05221 S-adenosyl-L-homocysteine hydrolase ZMO0183 PF12848 ABC transporter ZMO0183 PF00005 ABC transporter ZMO0186 PF01406 tRNA synthetases class I (C) catalytic domain ZMO0187 PF01474 Class-II DAHP synthetase family ZMO0188 PF07715 TonB-dependent Receptor Plug Domain ZMO0188 PF00593 TonB dependent receptor ZMO0188 PF07660 Secretin and TonB N terminus short domain ZMO0189 PF03313 Serine dehydratase alpha chain ZMO0189 PF03315 Serine dehydratase beta chain ZMO0193 PF10150 Ribonuclease E/G family ZMO0193 PF00575 S1 RNA binding domain ZMO0193 PF12111 Polyribonucleotide phosphorylase C terminal ZMO0195 PF01520 N-acetylmuramoyl-L-alanine amidase ZMO0197 PF17092 Penicillin-binding protein OB-like domain ZMO0197 PF00905 Penicillin binding protein transpeptidase domain ZMO0197 PF00912 Transglycosylase ZMO0198 PF03462 PCRF domain ZMO0198 PF00472 RF-1 domain ZMO0199 PF01726 LexA DNA binding domain ZMO0199 PF00717 Peptidase S24-like ZMO0200 PF02885 Glycosyl transferase family, helical bundle domain ZMO0200 PF00591 Glycosyl transferase family, a/b domain ZMO0201 PF00117 Glutamine amidotransferase class-I ZMO0202 PF02203 Tar ligand binding domain homologue ZMO0202 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ZMO0202 PF00672 HAMP domain ZMO0203 PF13411 MerR HTH family regulatory protein ZMO0206 PF00696 Amino acid kinase family ZMO0206 PF01472 PUA domain ZMO0207 PF01018 GTP1/OBG ZMO0207 PF01926 50S ribosome-binding GTPase ZMO0209 PF01016 Ribosomal L27 protein ZMO0211 PF00829 Ribosomal prokaryotic L21 protein ZMO0213 PF00082 Subtilase family ZMO0213 PF12951 Passenger-associated-transport-repeat ZMO0213 PF03797 Autotransporter beta-domain ZMO0214 PF01554 MatE ZMO0216 PF04225 Opacity-associated protein A LysM-like domain ZMO0216 PF01551 Peptidase family M23 ZMO0219 PF08148 DSHCT (NUC185) domain ZMO0219 PF00270 DEAD/DEAH box helicase ZMO0219 PF00271 Helicase conserved C-terminal domain ZMO0220 PF11953 Domain of unknown function (DUF3470) ZMO0220 PF00037 4Fe-4S binding domain ZMO0221 PF02559 CarD-like/TRCF domain ZMO0224 PF07021 Methionine biosynthesis protein MetW ZMO0224 PF00561 alpha/beta hydrolase fold ZMO0225 PF00561 alpha/beta hydrolase fold ZMO0226 PF00106 short chain dehydrogenase ZMO0227 PF01367 5'-3' exonuclease, C-terminal SAM fold ZMO0227 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ZMO0227 PF00476 DNA polymerase family A ZMO0227 PF01612 3'-5' exonuclease ZMO0229 PF01032 FecCD transport family ZMO0230 PF00005 ABC transporter ZMO0232 PF08032 RNA 2'-O ribose methyltransferase substrate binding ZMO0232 PF00588 SpoU rRNA Methylase family ZMO0234 PF13180 PDZ domain ZMO0236 PF10609 NUBPL iron-transfer P-loop NTPase ZMO0238 PF00213 ATP synthase delta (OSCP) subunit ZMO0239 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ZMO0239 PF00306 ATP synthase alpha/beta chain, C terminal domain ZMO0239 PF02874 ATP synthase alpha/beta family, beta-barrel domain ZMO0240 PF00231 ATP synthase ZMO0241 PF02874 ATP synthase alpha/beta family, beta-barrel domain ZMO0241 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ZMO0242 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ZMO0244 PF00216 Bacterial DNA-binding protein ZMO0246 PF00227 Proteasome subunit ZMO0247 PF00004 ATPase family associated with various cellular activities (AAA) ZMO0247 PF07724 AAA domain (Cdc48 subfamily) ZMO0249 PF00471 Ribosomal protein L33 ZMO0250 PF00072 Response regulator receiver domain ZMO0254 PF00005 ABC transporter ZMO0254 PF00664 ABC transporter transmembrane region ZMO0254 PF03412 Peptidase C39 family ZMO0255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ZMO0255 PF00529 HlyD membrane-fusion protein of T1SS ZMO0256 PF09330 D-lactate dehydrogenase, membrane binding ZMO0256 PF01565 FAD binding domain ZMO0257 PF00486 Transcriptional regulatory protein, C terminal ZMO0257 PF00072 Response regulator receiver domain ZMO0258 PF08918 PhoQ Sensor ZMO0258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO0260 PF00005 ABC transporter ZMO0262 PF03379 CcmB protein ZMO0271 PF00795 Carbon-nitrogen hydrolase ZMO0273 PF02772 S-adenosylmethionine synthetase, central domain ZMO0273 PF02773 S-adenosylmethionine synthetase, C-terminal domain ZMO0273 PF00438 S-adenosylmethionine synthetase, N-terminal domain ZMO0274 PF00309 Sigma-54 factor, Activator interacting domain (AID) ZMO0274 PF04552 Sigma-54, DNA binding domain ZMO0274 PF04963 Sigma-54 factor, core binding domain ZMO0275 PF00005 ABC transporter ZMO0279 PF00313 'Cold-shock' DNA-binding domain ZMO0282 PF00529 HlyD membrane-fusion protein of T1SS ZMO0282 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ZMO0283 PF00873 AcrB/AcrD/AcrF family ZMO0285 PF02321 Outer membrane efflux protein ZMO0286 PF04402 Protein of unknown function (DUF541) ZMO0287 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ZMO0290 PF04286 Protein of unknown function (DUF445) ZMO0291 PF01790 Prolipoprotein diacylglyceryl transferase ZMO0293 PF00083 Sugar (and other) transporter ZMO0294 PF00830 Ribosomal L28 family ZMO0296 PF14437 MafB19-like deaminase ZMO0297 PF03471 Transporter associated domain ZMO0297 PF03741 Integral membrane protein TerC family ZMO0299 PF02844 Phosphoribosylglycinamide synthetase, N domain ZMO0299 PF02843 Phosphoribosylglycinamide synthetase, C domain ZMO0299 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ZMO0300 PF13742 OB-fold nucleic acid binding domain ZMO0300 PF02601 Exonuclease VII, large subunit ZMO0303 PF00762 Ferrochelatase ZMO0307 PF05159 Capsule polysaccharide biosynthesis protein ZMO0314 PF13091 PLD-like domain ZMO0314 PF13396 Phospholipase_D-nuclease N-terminal ZMO0321 PF00186 Dihydrofolate reductase ZMO0322 PF06574 FAD synthetase ZMO0322 PF01687 Riboflavin kinase ZMO0323 PF00133 tRNA synthetases class I (I, L, M and V) ZMO0323 PF08264 Anticodon-binding domain of tRNA ZMO0324 PF01252 Signal peptidase (SPase) II ZMO0326 PF14489 QueF-like protein ZMO0327 PF01053 Cys/Met metabolism PLP-dependent enzyme ZMO0328 PF08207 Elongation factor P (EF-P) KOW-like domain ZMO0328 PF01132 Elongation factor P (EF-P) OB domain ZMO0328 PF09285 Elongation factor P, C-terminal ZMO0329 PF00459 Inositol monophosphatase family ZMO0331 PF05951 Bacterial protein of unknown function (DUF882) ZMO0332 PF02581 Thiamine monophosphate synthase ZMO0335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ZMO0339 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ZMO0339 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ZMO0339 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ZMO0339 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ZMO0344 PF01523 Putative modulator of DNA gyrase ZMO0346 PF00909 Ammonium Transporter Family ZMO0347 PF17209 Hfq protein ZMO0348 PF16360 GTP-binding GTPase Middle Region ZMO0348 PF13167 GTP-binding GTPase N-terminal ZMO0348 PF01926 50S ribosome-binding GTPase ZMO0349 PF02622 Uncharacterized ACR, COG1678 ZMO0351 PF13195 Protein of unknown function (DUF4011) ZMO0351 PF13087 AAA domain ZMO0351 PF13086 AAA domain ZMO0351 PF13087 AAA domain ZMO0351 PF13195 Protein of unknown function (DUF4011) ZMO0351 PF13086 AAA domain ZMO0353 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ZMO0354 PF08676 MutL C terminal dimerisation domain ZMO0354 PF01119 DNA mismatch repair protein, C-terminal domain ZMO0356 PF04085 rod shape-determining protein MreC ZMO0359 PF03717 Penicillin-binding Protein dimerisation domain ZMO0359 PF00905 Penicillin binding protein transpeptidase domain ZMO0360 PF01098 Cell cycle protein ZMO0362 PF04851 Type III restriction enzyme, res subunit ZMO0362 PF17757 UvrB interaction domain ZMO0362 PF00271 Helicase conserved C-terminal domain ZMO0362 PF12344 Ultra-violet resistance protein B ZMO0362 PF02151 UvrB/uvrC motif ZMO0363 PF01702 Queuine tRNA-ribosyltransferase ZMO0364 PF01653 NAD-dependent DNA ligase adenylation domain ZMO0364 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ZMO0364 PF12826 Helix-hairpin-helix motif ZMO0364 PF03120 NAD-dependent DNA ligase OB-fold domain ZMO0364 PF00533 BRCA1 C Terminus (BRCT) domain ZMO0366 PF00083 Sugar (and other) transporter ZMO0367 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ZMO0367 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ZMO0368 PF00920 Dehydratase family ZMO0369 PF02685 Glucokinase ZMO0371 PF01177 Asp/Glu/Hydantoin racemase ZMO0372 PF01037 Lrp/AsnC ligand binding domain ZMO0374 PF02435 Levansucrase/Invertase ZMO0375 PF02435 Levansucrase/Invertase ZMO0376 PF00004 ATPase family associated with various cellular activities (AAA) ZMO0376 PF05362 Lon protease (S16) C-terminal proteolytic domain ZMO0376 PF02190 ATP-dependent protease La (LON) substrate-binding domain ZMO0401 PF08448 PAS fold ZMO0401 PF08447 PAS fold ZMO0401 PF00563 EAL domain ZMO0401 PF00990 Diguanylate cyclase, GGDEF domain ZMO0402 PF01728 FtsJ-like methyltransferase ZMO0403 PF02541 Ppx/GppA phosphatase family ZMO0405 PF00004 ATPase family associated with various cellular activities (AAA) ZMO0405 PF07724 AAA domain (Cdc48 subfamily) ZMO0405 PF17871 AAA lid domain ZMO0405 PF02861 Clp amino terminal domain, pathogenicity island component ZMO0405 PF10431 C-terminal, D2-small domain, of ClpB protein ZMO0406 PF01061 ABC-2 type transporter ZMO0408 PF00202 Aminotransferase class-III ZMO0409 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ZMO0409 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ZMO0410 PF01430 Hsp33 protein ZMO0411 PF01751 Toprim domain ZMO0411 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO0411 PF00986 DNA gyrase B subunit, carboxyl terminus ZMO0411 PF00204 DNA gyrase B ZMO0412 PF01914 MarC family integral membrane protein ZMO0413 PF02325 YGGT family ZMO0416 PF00005 ABC transporter ZMO0419 PF01553 Acyltransferase ZMO0420 PF02153 Prephenate dehydrogenase ZMO0421 PF00155 Aminotransferase class I and II ZMO0422 PF02082 Transcriptional regulator ZMO0423 PF01458 Uncharacterized protein family (UPF0051) ZMO0425 PF00005 ABC transporter ZMO0426 PF01458 Uncharacterized protein family (UPF0051) ZMO0427 PF00266 Aminotransferase class-V ZMO0428 PF01883 Iron-sulfur cluster assembly protein ZMO0429 PF01521 Iron-sulphur cluster biosynthesis ZMO0431 PF14602 Hexapeptide repeat of succinyl-transferase ZMO0431 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ZMO0431 PF00132 Bacterial transferase hexapeptide (six repeats) ZMO0433 PF00625 Guanylate kinase ZMO0439 PF01479 S4 domain ZMO0439 PF00849 RNA pseudouridylate synthase ZMO0442 PF13419 Haloacid dehalogenase-like hydrolase ZMO0443 PF00268 Ribonucleotide reductase, small chain ZMO0446 PF03062 MBOAT, membrane-bound O-acyltransferase family ZMO0453 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ZMO0453 PF01926 50S ribosome-binding GTPase ZMO0454 PF01268 Formate--tetrahydrofolate ligase ZMO0456 PF00111 2Fe-2S iron-sulfur cluster binding domain ZMO0456 PF00175 Oxidoreductase NAD-binding domain ZMO0457 PF01037 Lrp/AsnC ligand binding domain ZMO0458 PF00005 ABC transporter ZMO0459 PF12704 MacB-like periplasmic core domain ZMO0459 PF02687 FtsX-like permease family ZMO0460 PF03129 Anticodon binding domain ZMO0460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ZMO0462 PF06418 CTP synthase N-terminus ZMO0462 PF00117 Glutamine amidotransferase class-I ZMO0465 PF00121 Triosephosphate isomerase ZMO0468 PF04715 Anthranilate synthase component I, N terminal region ZMO0468 PF00425 chorismate binding enzyme ZMO0471 PF03466 LysR substrate binding domain ZMO0471 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO0473 PF00885 6,7-dimethyl-8-ribityllumazine synthase ZMO0474 PF00925 GTP cyclohydrolase II ZMO0474 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ZMO0475 PF00677 Lumazine binding domain ZMO0476 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ZMO0476 PF01872 RibD C-terminal domain ZMO0478 PF00486 Transcriptional regulatory protein, C terminal ZMO0478 PF00072 Response regulator receiver domain ZMO0480 PF16736 Single Cache-like ZMO0480 PF00512 His Kinase A (phospho-acceptor) domain ZMO0480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO0480 PF00989 PAS fold ZMO0482 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ZMO0483 PF00742 Homoserine dehydrogenase ZMO0483 PF03447 Homoserine dehydrogenase, NAD binding domain ZMO0483 PF01842 ACT domain ZMO0484 PF02308 MgtC family ZMO0485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ZMO0485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ZMO0485 PF02770 Acyl-CoA dehydrogenase, middle domain ZMO0487 PF03328 HpcH/HpaI aldolase/citrate lyase family ZMO0490 PF00326 Prolyl oligopeptidase family ZMO0490 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ZMO0491 PF00557 Metallopeptidase family M24 ZMO0491 PF01321 Creatinase/Prolidase N-terminal domain ZMO0492 PF00543 Nitrogen regulatory protein P-II ZMO0493 PF03951 Glutamine synthetase, beta-Grasp domain ZMO0493 PF00120 Glutamine synthetase, catalytic domain ZMO0494 PF07690 Major Facilitator Superfamily ZMO0496 PF07244 Surface antigen variable number repeat ZMO0496 PF01103 Surface antigen ZMO0496 PF17243 POTRA domain TamA domain 1 ZMO0497 PF13419 Haloacid dehalogenase-like hydrolase ZMO0498 PF00132 Bacterial transferase hexapeptide (six repeats) ZMO0498 PF12804 MobA-like NTP transferase domain ZMO0499 PF00912 Transglycosylase ZMO0499 PF00905 Penicillin binding protein transpeptidase domain ZMO0503 PF00535 Glycosyl transferase family 2 ZMO0505 PF00849 RNA pseudouridylate synthase ZMO0506 PF00472 RF-1 domain ZMO0507 PF13185 GAF domain ZMO0510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ZMO0510 PF02817 e3 binding domain ZMO0510 PF00364 Biotin-requiring enzyme ZMO0511 PF03061 Thioesterase superfamily ZMO0512 PF07992 Pyridine nucleotide-disulphide oxidoreductase ZMO0512 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ZMO0513 PF01569 PAP2 superfamily ZMO0514 PF00177 Ribosomal protein S7p/S5e ZMO0515 PF00679 Elongation factor G C-terminus ZMO0515 PF03764 Elongation factor G, domain IV ZMO0515 PF00009 Elongation factor Tu GTP binding domain ZMO0515 PF03144 Elongation factor Tu domain 2 ZMO0515 PF14492 Elongation Factor G, domain II ZMO0516 PF00009 Elongation factor Tu GTP binding domain ZMO0516 PF03144 Elongation factor Tu domain 2 ZMO0516 PF03143 Elongation factor Tu C-terminal domain ZMO0517 PF00297 Ribosomal protein L3 ZMO0518 PF00573 Ribosomal protein L4/L1 family ZMO0519 PF00276 Ribosomal protein L23 ZMO0520 PF03947 Ribosomal Proteins L2, C-terminal domain ZMO0520 PF00181 Ribosomal Proteins L2, RNA binding domain ZMO0521 PF00237 Ribosomal protein L22p/L17e ZMO0522 PF00189 Ribosomal protein S3, C-terminal domain ZMO0522 PF07650 KH domain ZMO0523 PF00252 Ribosomal protein L16p/L10e ZMO0524 PF00831 Ribosomal L29 protein ZMO0525 PF00366 Ribosomal protein S17 ZMO0526 PF00238 Ribosomal protein L14p/L23e ZMO0527 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ZMO0527 PF00467 KOW motif ZMO0528 PF00281 Ribosomal protein L5 ZMO0528 PF00673 ribosomal L5P family C-terminus ZMO0529 PF00253 Ribosomal protein S14p/S29e ZMO0530 PF00410 Ribosomal protein S8 ZMO0531 PF00347 Ribosomal protein L6 ZMO0532 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ZMO0533 PF03719 Ribosomal protein S5, C-terminal domain ZMO0533 PF00333 Ribosomal protein S5, N-terminal domain ZMO0534 PF00327 Ribosomal protein L30p/L7e ZMO0536 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ZMO0537 PF00344 SecY translocase ZMO0538 PF05191 Adenylate kinase, active site lid ZMO0539 PF00416 Ribosomal protein S13/S18 ZMO0540 PF00411 Ribosomal protein S11 ZMO0541 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ZMO0541 PF01000 RNA polymerase Rpb3/RpoA insert domain ZMO0541 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ZMO0542 PF01196 Ribosomal protein L17 ZMO0543 PF00694 Aconitase C-terminal domain ZMO0543 PF00330 Aconitase family (aconitate hydratase) ZMO0544 PF00180 Isocitrate/isopropylmalate dehydrogenase ZMO0545 PF00218 Indole-3-glycerol phosphate synthase ZMO0546 PF01740 STAS domain ZMO0546 PF00916 Sulfate permease family ZMO0547 PF00654 Voltage gated chloride channel ZMO0548 PF12282 Signal transduction histidine kinase ZMO0548 PF07568 Histidine kinase ZMO0548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO0549 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ZMO0549 PF00575 S1 RNA binding domain ZMO0549 PF01138 3' exoribonuclease family, domain 1 ZMO0549 PF03725 3' exoribonuclease family, domain 2 ZMO0549 PF00013 KH domain ZMO0550 PF00312 Ribosomal protein S15 ZMO0551 PF01509 TruB family pseudouridylate synthase (N terminal domain) ZMO0551 PF16198 tRNA pseudouridylate synthase B C-terminal domain ZMO0552 PF00265 Thymidine kinase ZMO0553 PF02033 Ribosome-binding factor A ZMO0554 PF00009 Elongation factor Tu GTP binding domain ZMO0554 PF08364 Bacterial translation initiation factor IF-2 associated region ZMO0554 PF04760 Translation initiation factor IF-2, N-terminal region ZMO0554 PF11987 Translation-initiation factor 2 ZMO0556 PF08529 NusA N-terminal domain ZMO0556 PF13184 NusA-like KH domain ZMO0556 PF00575 S1 RNA binding domain ZMO0557 PF17384 RimP C-terminal SH3 domain ZMO0557 PF02576 RimP N-terminal domain ZMO0558 PF07995 Glucose / Sorbosone dehydrogenase ZMO0560 PF00155 Aminotransferase class I and II ZMO0561 PF07715 TonB-dependent Receptor Plug Domain ZMO0561 PF00593 TonB dependent receptor ZMO0562 PF00155 Aminotransferase class I and II ZMO0563 PF02153 Prephenate dehydrogenase ZMO0563 PF01817 Chorismate mutase type II ZMO0564 PF00348 Polyprenyl synthetase ZMO0565 PF00270 DEAD/DEAH box helicase ZMO0565 PF00271 Helicase conserved C-terminal domain ZMO0565 PF04408 Helicase associated domain (HA2) ZMO0565 PF08482 ATP-dependent helicase C-terminal ZMO0566 PF07690 Major Facilitator Superfamily ZMO0567 PF02629 CoA binding domain ZMO0567 PF00549 CoA-ligase ZMO0571 PF00528 Binding-protein-dependent transport system inner membrane component ZMO0572 PF00005 ABC transporter ZMO0573 PF13417 Glutathione S-transferase, N-terminal domain ZMO0573 PF04399 Glutaredoxin 2, C terminal domain ZMO0574 PF13361 UvrD-like helicase C-terminal domain ZMO0574 PF00580 UvrD/REP helicase N-terminal domain ZMO0576 PF01479 S4 domain ZMO0576 PF00849 RNA pseudouridylate synthase ZMO0578 PF00375 Sodium:dicarboxylate symporter family ZMO0581 PF07690 Major Facilitator Superfamily ZMO0582 PF02875 Mur ligase family, glutamate ligase domain ZMO0582 PF08245 Mur ligase middle domain ZMO0583 PF01039 Carboxyl transferase domain ZMO0583 PF17848 Acetyl-coA carboxylase zinc finger domain ZMO0584 PF00290 Tryptophan synthase alpha chain ZMO0585 PF00291 Pyridoxal-phosphate dependent enzyme ZMO0586 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ZMO0587 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ZMO0589 PF18073 Rubredoxin metal binding domain ZMO0589 PF06745 KaiC ZMO0590 PF02674 Colicin V production protein ZMO0593 PF01761 3-dehydroquinate synthase ZMO0594 PF01202 Shikimate kinase ZMO0598 PF00589 Phage integrase family ZMO0598 PF02899 Phage integrase, N-terminal SAM-like domain ZMO0599 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ZMO0601 PF13188 PAS domain ZMO0601 PF08448 PAS fold ZMO0601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO0601 PF00072 Response regulator receiver domain ZMO0601 PF00512 His Kinase A (phospho-acceptor) domain ZMO0602 PF00691 OmpA family ZMO0602 PF13677 Membrane MotB of proton-channel complex MotA/MotB ZMO0603 PF01618 MotA/TolQ/ExbB proton channel family ZMO0607 PF02119 Flagellar P-ring protein ZMO0608 PF02107 Flagellar L-ring protein ZMO0609 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ZMO0609 PF00460 Flagella basal body rod protein ZMO0610 PF00460 Flagella basal body rod protein ZMO0610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ZMO0611 PF07196 Flagellin hook IN motif ZMO0611 PF07559 Flagellar basal body protein FlaE ZMO0611 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ZMO0611 PF00460 Flagella basal body rod protein ZMO0612 PF03963 Flagellar hook capping protein - N-terminal region ZMO0612 PF13860 FlgD Ig-like domain ZMO0612 PF13861 FlgD Tudor-like domain ZMO0613 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ZMO0613 PF00460 Flagella basal body rod protein ZMO0616 PF01618 MotA/TolQ/ExbB proton channel family ZMO0624 PF00771 FHIPEP family ZMO0625 PF10609 NUBPL iron-transfer P-loop NTPase ZMO0626 PF04545 Sigma-70, region 4 ZMO0626 PF04539 Sigma-70 region 3 ZMO0626 PF04542 Sigma-70 region 2 ZMO0629 PF00669 Bacterial flagellin N-terminal helical region ZMO0629 PF00700 Bacterial flagellin C-terminal helical region ZMO0629 PF00669 Bacterial flagellin N-terminal helical region ZMO0629 PF00700 Bacterial flagellin C-terminal helical region ZMO0631 PF02954 Bacterial regulatory protein, Fis family ZMO0631 PF00072 Response regulator receiver domain ZMO0631 PF00158 Sigma-54 interaction domain ZMO0632 PF02049 Flagellar hook-basal body complex protein FliE ZMO0634 PF08345 Flagellar M-ring protein C-terminal ZMO0634 PF01514 Secretory protein of YscJ/FliF family ZMO0635 PF14841 FliG middle domain ZMO0635 PF01706 FliG C-terminal domain ZMO0635 PF14842 FliG N-terminal domain ZMO0637 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ZMO0637 PF18269 T3SS EscN ATPase C-terminal domain ZMO0643 PF02154 Flagellar motor switch protein FliM ZMO0643 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ZMO0644 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ZMO0647 PF00813 FliP family ZMO0648 PF01313 Bacterial export proteins, family 3 ZMO0649 PF01311 Bacterial export proteins, family 1 ZMO0650 PF01312 FlhB HrpN YscU SpaS Family ZMO0651 PF02465 Flagellar hook-associated protein 2 N-terminus ZMO0651 PF07195 Flagellar hook-associated protein 2 C-terminus ZMO0653 PF01594 AI-2E family transporter ZMO0654 PF01522 Polysaccharide deacetylase ZMO0656 PF00156 Phosphoribosyl transferase domain ZMO0657 PF04958 Arginine N-succinyltransferase beta subunit ZMO0658 PF01546 Peptidase family M20/M25/M40 ZMO0658 PF07687 Peptidase dimerisation domain ZMO0660 PF00012 Hsp70 protein ZMO0661 PF00684 DnaJ central domain ZMO0661 PF00226 DnaJ domain ZMO0661 PF01556 DnaJ C terminal domain ZMO0662 PF00206 Lyase ZMO0662 PF10397 Adenylosuccinate lyase C-terminus ZMO0663 PF04002 RadC-like JAB domain ZMO0667 PF00119 ATP synthase A chain ZMO0669 PF00430 ATP synthase B/B' CF(0) ZMO0671 PF00430 ATP synthase B/B' CF(0) ZMO0672 PF12826 Helix-hairpin-helix motif ZMO0672 PF02151 UvrB/uvrC motif ZMO0672 PF08459 UvrC Helix-hairpin-helix N-terminal ZMO0672 PF01541 GIY-YIG catalytic domain ZMO0673 PF11967 Recombination protein O N terminal ZMO0673 PF02565 Recombination protein O C terminal ZMO0675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO0675 PF03466 LysR substrate binding domain ZMO0676 PF01053 Cys/Met metabolism PLP-dependent enzyme ZMO0677 PF00180 Isocitrate/isopropylmalate dehydrogenase ZMO0680 PF01867 CRISPR associated protein Cas1 ZMO0681 PF18019 HD domain ZMO0682 PF09611 CRISPR-associated protein (Cas_Csy1) ZMO0683 PF09614 CRISPR-associated protein (Cas_Csy2) ZMO0684 PF09615 CRISPR-associated protein (Cas_Csy3) ZMO0687 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ZMO0687 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ZMO0687 PF00205 Thiamine pyrophosphate enzyme, central domain ZMO0688 PF03547 Membrane transport protein ZMO0689 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ZMO0689 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ZMO0691 PF01134 Glucose inhibited division protein A ZMO0692 PF00521 DNA gyrase/topoisomerase IV, subunit A ZMO0692 PF03989 DNA gyrase C-terminal domain, beta-propeller ZMO0693 PF02566 OsmC-like protein ZMO0697 PF00893 Small Multidrug Resistance protein ZMO0703 PF00326 Prolyl oligopeptidase family ZMO0704 PF00501 AMP-binding enzyme ZMO0706 PF10576 Iron-sulfur binding domain of endonuclease III ZMO0706 PF00730 HhH-GPD superfamily base excision DNA repair protein ZMO0706 PF00633 Helix-hairpin-helix motif ZMO0707 PF05173 Dihydrodipicolinate reductase, C-terminus ZMO0707 PF01113 Dihydrodipicolinate reductase, N-terminus ZMO0708 PF00551 Formyl transferase ZMO0709 PF00586 AIR synthase related protein, N-terminal domain ZMO0709 PF02769 AIR synthase related protein, C-terminal domain ZMO0712 PF13090 Polyphosphate kinase C-terminal domain 2 ZMO0712 PF17941 Polyphosphate kinase C-terminal domain 1 ZMO0712 PF13089 Polyphosphate kinase N-terminal domain ZMO0712 PF02503 Polyphosphate kinase middle domain ZMO0713 PF02541 Ppx/GppA phosphatase family ZMO0714 PF00570 HRDC domain ZMO0714 PF01612 3'-5' exonuclease ZMO0715 PF01336 OB-fold nucleic acid binding domain ZMO0715 PF02938 GAD domain ZMO0715 PF00152 tRNA synthetases class II (D, K and N) ZMO0716 PF03976 Polyphosphate kinase 2 (PPK2) ZMO0718 PF01272 Transcription elongation factor, GreA/GreB, C-term ZMO0718 PF03449 Transcription elongation factor, N-terminal ZMO0719 PF01464 Transglycosylase SLT domain ZMO0720 PF00701 Dihydrodipicolinate synthetase family ZMO0721 PF01668 SmpB protein ZMO0722 PF05649 Peptidase family M13 ZMO0722 PF01431 Peptidase family M13 ZMO0724 PF00467 KOW motif ZMO0724 PF02357 Transcription termination factor nusG ZMO0725 PF00298 Ribosomal protein L11, RNA binding domain ZMO0725 PF03946 Ribosomal protein L11, N-terminal domain ZMO0726 PF00687 Ribosomal protein L1p/L10e family ZMO0727 PF00466 Ribosomal protein L10 ZMO0728 PF16320 Ribosomal protein L7/L12 dimerisation domain ZMO0728 PF00542 Ribosomal protein L7/L12 C-terminal domain ZMO0731 PF04561 RNA polymerase Rpb2, domain 2 ZMO0731 PF04563 RNA polymerase beta subunit ZMO0731 PF04565 RNA polymerase Rpb2, domain 3 ZMO0731 PF10385 RNA polymerase beta subunit external 1 domain ZMO0731 PF04560 RNA polymerase Rpb2, domain 7 ZMO0731 PF00562 RNA polymerase Rpb2, domain 6 ZMO0732 PF04997 RNA polymerase Rpb1, domain 1 ZMO0732 PF05000 RNA polymerase Rpb1, domain 4 ZMO0732 PF04983 RNA polymerase Rpb1, domain 3 ZMO0732 PF04998 RNA polymerase Rpb1, domain 5 ZMO0732 PF00623 RNA polymerase Rpb1, domain 2 ZMO0733 PF13673 Acetyltransferase (GNAT) domain ZMO0734 PF00459 Inositol monophosphatase family ZMO0735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ZMO0735 PF00289 Biotin carboxylase, N-terminal domain ZMO0735 PF02785 Biotin carboxylase C-terminal domain ZMO0736 PF00364 Biotin-requiring enzyme ZMO0737 PF01220 Dehydroquinase class II ZMO0738 PF05690 Thiazole biosynthesis protein ThiG ZMO0739 PF03992 Antibiotic biosynthesis monooxygenase ZMO0743 PF00009 Elongation factor Tu GTP binding domain ZMO0743 PF16658 Class II release factor RF3, C-terminal domain ZMO0743 PF03144 Elongation factor Tu domain 2 ZMO0748 PF00291 Pyridoxal-phosphate dependent enzyme ZMO0749 PF04545 Sigma-70, region 4 ZMO0749 PF04542 Sigma-70 region 2 ZMO0749 PF00140 Sigma-70 factor, region 1.2 ZMO0750 PF00849 RNA pseudouridylate synthase ZMO0752 PF10090 Histidine phosphotransferase C-terminal domain ZMO0753 PF00462 Glutaredoxin ZMO0759 PF00753 Metallo-beta-lactamase superfamily ZMO0759 PF16123 Hydroxyacylglutathione hydrolase C-terminus ZMO0760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ZMO0765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ZMO0765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ZMO0765 PF02824 TGS domain ZMO0765 PF03129 Anticodon binding domain ZMO0766 PF08335 GlnD PII-uridylyltransferase ZMO0766 PF01966 HD domain ZMO0770 PF00571 CBS domain ZMO0770 PF01769 Divalent cation transporter ZMO0770 PF03448 MgtE intracellular N domain ZMO0773 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ZMO0774 PF03466 LysR substrate binding domain ZMO0774 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO0776 PF01795 MraW methylase family ZMO0777 PF00753 Metallo-beta-lactamase superfamily ZMO0778 PF00873 AcrB/AcrD/AcrF family ZMO0780 PF02321 Outer membrane efflux protein ZMO0781 PF03466 LysR substrate binding domain ZMO0781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO0782 PF02637 GatB domain ZMO0782 PF02934 GatB/GatE catalytic domain ZMO0783 PF01425 Amidase ZMO0784 PF02686 Glu-tRNAGln amidotransferase C subunit ZMO0785 PF03652 Holliday junction resolvase ZMO0786 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase ZMO0787 PF00732 GMC oxidoreductase ZMO0787 PF05199 GMC oxidoreductase ZMO0788 PF00034 Cytochrome c ZMO0788 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ZMO0791 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ZMO0791 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ZMO0792 PF01979 Amidohydrolase family ZMO0794 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ZMO0794 PF00326 Prolyl oligopeptidase family ZMO0797 PF00106 short chain dehydrogenase ZMO0798 PF02321 Outer membrane efflux protein ZMO0800 PF00005 ABC transporter ZMO0804 PF01118 Semialdehyde dehydrogenase, NAD binding domain ZMO0806 PF00883 Cytosol aminopeptidase family, catalytic domain ZMO0806 PF02789 Cytosol aminopeptidase family, N-terminal domain ZMO0807 PF18693 TRAM domain ZMO0807 PF04055 Radical SAM superfamily ZMO0807 PF00919 Uncharacterized protein family UPF0004 ZMO0809 PF02594 Uncharacterised ACR, YggU family COG1872 ZMO0810 PF01416 tRNA pseudouridine synthase ZMO0811 PF00551 Formyl transferase ZMO0811 PF02911 Formyl transferase, C-terminal domain ZMO0812 PF02132 RecR protein ZMO0812 PF13662 Toprim domain ZMO0813 PF01327 Polypeptide deformylase ZMO0814 PF02646 RmuC family ZMO0818 PF01242 6-pyruvoyl tetrahydropterin synthase ZMO0819 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ZMO0819 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ZMO0819 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ZMO0820 PF02769 AIR synthase related protein, C-terminal domain ZMO0820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ZMO0820 PF00586 AIR synthase related protein, N-terminal domain ZMO0821 PF00291 Pyridoxal-phosphate dependent enzyme ZMO0823 PF01795 MraW methylase family ZMO0825 PF00905 Penicillin binding protein transpeptidase domain ZMO0825 PF03717 Penicillin-binding Protein dimerisation domain ZMO0826 PF01225 Mur ligase family, catalytic domain ZMO0826 PF08245 Mur ligase middle domain ZMO0826 PF02875 Mur ligase family, glutamate ligase domain ZMO0827 PF08245 Mur ligase middle domain ZMO0827 PF01225 Mur ligase family, catalytic domain ZMO0827 PF02875 Mur ligase family, glutamate ligase domain ZMO0828 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ZMO0828 PF00953 Glycosyl transferase family 4 ZMO0829 PF08245 Mur ligase middle domain ZMO0830 PF01098 Cell cycle protein ZMO0831 PF04101 Glycosyltransferase family 28 C-terminal domain ZMO0831 PF03033 Glycosyltransferase family 28 N-terminal domain ZMO0832 PF08245 Mur ligase middle domain ZMO0832 PF02875 Mur ligase family, glutamate ligase domain ZMO0832 PF01225 Mur ligase family, catalytic domain ZMO0833 PF01565 FAD binding domain ZMO0833 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ZMO0834 PF07478 D-ala D-ala ligase C-terminus ZMO0834 PF01820 D-ala D-ala ligase N-terminus ZMO0835 PF03799 Cell division protein FtsQ ZMO0835 PF08478 POTRA domain, FtsQ-type ZMO0836 PF02491 SHS2 domain inserted in FTSA ZMO0837 PF00091 Tubulin/FtsZ family, GTPase domain ZMO0837 PF12327 FtsZ family, C-terminal domain ZMO0841 PF00654 Voltage gated chloride channel ZMO0842 PF13286 Phosphohydrolase-associated domain ZMO0842 PF01966 HD domain ZMO0843 PF00133 tRNA synthetases class I (I, L, M and V) ZMO0843 PF00750 tRNA synthetases class I (R) ZMO0843 PF05746 DALR anticodon binding domain ZMO0843 PF03485 Arginyl tRNA synthetase N terminal domain ZMO0845 PF02272 DHHA1 domain ZMO0845 PF01411 tRNA synthetases class II (A) ZMO0845 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ZMO0846 PF02254 TrkA-N domain ZMO0846 PF00999 Sodium/hydrogen exchanger family ZMO0847 PF04966 Carbohydrate-selective porin, OprB family ZMO0850 PF02954 Bacterial regulatory protein, Fis family ZMO0850 PF00158 Sigma-54 interaction domain ZMO0850 PF00072 Response regulator receiver domain ZMO0851 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ZMO0851 PF01243 Pyridoxamine 5'-phosphate oxidase ZMO0852 PF02547 Queuosine biosynthesis protein ZMO0853 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ZMO0854 PF01467 Cytidylyltransferase-like ZMO0855 PF00348 Polyprenyl synthetase ZMO0856 PF02609 Exonuclease VII small subunit ZMO0859 PF00266 Aminotransferase class-V ZMO0860 PF00111 2Fe-2S iron-sulfur cluster binding domain ZMO0861 PF12169 DNA polymerase III subunits gamma and tau domain III ZMO0861 PF12170 DNA polymerase III tau subunit V interacting with alpha ZMO0861 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ZMO0862 PF02575 YbaB/EbfC DNA-binding family ZMO0863 PF00692 dUTPase ZMO0864 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ZMO0865 PF00772 DnaB-like helicase N terminal domain ZMO0865 PF03796 DnaB-like helicase C terminal domain ZMO0866 PF01545 Cation efflux family ZMO0867 PF01370 NAD dependent epimerase/dehydratase family ZMO0871 PF01593 Flavin containing amine oxidoreductase ZMO0872 PF13243 Squalene-hopene cyclase C-terminal domain ZMO0872 PF13249 Squalene-hopene cyclase N-terminal domain ZMO0874 PF04055 Radical SAM superfamily ZMO0875 PF02401 LytB protein ZMO0878 PF01339 CheB methylesterase ZMO0878 PF00072 Response regulator receiver domain ZMO0880 PF01627 Hpt domain ZMO0880 PF01584 CheW-like domain ZMO0880 PF02895 Signal transducing histidine kinase, homodimeric domain ZMO0880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO0882 PF00672 HAMP domain ZMO0882 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ZMO0882 PF02203 Tar ligand binding domain homologue ZMO0883 PF00380 Ribosomal protein S9/S16 ZMO0884 PF00572 Ribosomal protein L13 ZMO0888 PF02796 Helix-turn-helix domain of resolvase ZMO0888 PF00239 Resolvase, N terminal domain ZMO0889 PF01263 Aldose 1-epimerase ZMO0890 PF01921 tRNA synthetases class I (K) ZMO0892 PF13307 Helicase C-terminal domain ZMO0892 PF04851 Type III restriction enzyme, res subunit ZMO0892 PF00929 Exonuclease ZMO0893 PF00144 Beta-lactamase ZMO0899 PF02540 NAD synthase ZMO0899 PF00795 Carbon-nitrogen hydrolase ZMO0900 PF00749 tRNA synthetases class I (E and Q), catalytic domain ZMO0902 PF00593 TonB dependent receptor ZMO0903 PF00682 HMGL-like ZMO0903 PF08502 LeuA allosteric (dimerisation) domain ZMO0905 PF04349 Periplasmic glucan biosynthesis protein, MdoG ZMO0907 PF13632 Glycosyl transferase family group 2 ZMO0910 PF00005 ABC transporter ZMO0911 PF02563 Polysaccharide biosynthesis/export protein ZMO0913 PF01063 Amino-transferase class IV ZMO0914 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ZMO0914 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ZMO0915 PF00403 Heavy-metal-associated domain ZMO0918 PF06628 Catalase-related immune-responsive ZMO0918 PF00199 Catalase ZMO0919 PF00990 Diguanylate cyclase, GGDEF domain ZMO0919 PF00072 Response regulator receiver domain ZMO0923 PF01960 ArgJ family ZMO0924 PF01043 SecA preprotein cross-linking domain ZMO0924 PF07517 SecA DEAD-like domain ZMO0924 PF07516 SecA Wing and Scaffold domain ZMO0924 PF02810 SEC-C motif ZMO0925 PF00313 'Cold-shock' DNA-binding domain ZMO0927 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ZMO0928 PF03576 Peptidase family S58 ZMO0936 PF00892 EamA-like transporter family ZMO0937 PF00155 Aminotransferase class I and II ZMO0938 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase ZMO0939 PF01979 Amidohydrolase family ZMO0940 PF12802 MarR family ZMO0941 PF01370 NAD dependent epimerase/dehydratase family ZMO0942 PF00251 Glycosyl hydrolases family 32 N-terminal domain ZMO0942 PF08244 Glycosyl hydrolases family 32 C terminal ZMO0946 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ZMO0946 PF05698 Bacterial trigger factor protein (TF) C-terminus ZMO0946 PF05697 Bacterial trigger factor protein (TF) ZMO0948 PF00574 Clp protease ZMO0949 PF10431 C-terminal, D2-small domain, of ClpB protein ZMO0949 PF07724 AAA domain (Cdc48 subfamily) ZMO0949 PF06689 ClpX C4-type zinc finger ZMO0951 PF01218 Coproporphyrinogen III oxidase ZMO0952 PF00588 SpoU rRNA Methylase family ZMO0956 PF00355 Rieske [2Fe-2S] domain ZMO0956 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ZMO0957 PF00033 Cytochrome b/b6/petB ZMO0957 PF00032 Cytochrome b(C-terminal)/b6/petD ZMO0958 PF02167 Cytochrome C1 family ZMO0959 PF00912 Transglycosylase ZMO0962 PF01979 Amidohydrolase family ZMO0963 PF00440 Bacterial regulatory proteins, tetR family ZMO0964 PF02321 Outer membrane efflux protein ZMO0965 PF00529 HlyD membrane-fusion protein of T1SS ZMO0965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ZMO0966 PF07690 Major Facilitator Superfamily ZMO0967 PF01773 Na+ dependent nucleoside transporter N-terminus ZMO0967 PF07670 Nucleoside recognition ZMO0967 PF07662 Na+ dependent nucleoside transporter C-terminus ZMO0969 PF00860 Permease family ZMO0971 PF00962 Adenosine/AMP deaminase ZMO0974 PF04794 YdjC-like protein ZMO0976 PF00248 Aldo/keto reductase family ZMO0979 PF00593 TonB dependent receptor ZMO0979 PF07715 TonB-dependent Receptor Plug Domain ZMO0980 PF02767 DNA polymerase III beta subunit, central domain ZMO0980 PF00712 DNA polymerase III beta subunit, N-terminal domain ZMO0980 PF02768 DNA polymerase III beta subunit, C-terminal domain ZMO0981 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ZMO0981 PF00005 ABC transporter ZMO0985 PF01975 Survival protein SurE ZMO0986 PF02403 Seryl-tRNA synthetase N-terminal domain ZMO0986 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ZMO0987 PF01258 Prokaryotic dksA/traR C4-type zinc finger ZMO0989 PF00011 Hsp20/alpha crystallin family ZMO0996 PF00924 Mechanosensitive ion channel ZMO0997 PF01081 KDPG and KHG aldolase ZMO0998 PF01625 Peptide methionine sulfoxide reductase ZMO0999 PF01300 Telomere recombination ZMO0999 PF03481 Putative GTP-binding controlling metal-binding ZMO1000 PF01717 Cobalamin-independent synthase, Catalytic domain ZMO1000 PF08267 Cobalamin-independent synthase, N-terminal domain ZMO1001 PF00854 POT family ZMO1002 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ZMO1002 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ZMO1002 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ZMO1002 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ZMO1003 PF02581 Thiamine monophosphate synthase ZMO1003 PF08543 Phosphomethylpyrimidine kinase ZMO1004 PF01351 Ribonuclease HII ZMO1005 PF01555 DNA methylase ZMO1005 PF18755 Restriction Enzyme Adenine Methylase Associated ZMO1006 PF00809 Pterin binding enzyme ZMO1007 PF01062 Bestrophin, RFP-TM, chloride channel ZMO1008 PF01565 FAD binding domain ZMO1008 PF02913 FAD linked oxidases, C-terminal domain ZMO1010 PF13811 Domain of unknown function (DUF4186) ZMO1011 PF03884 DNA gyrase inhibitor YacG ZMO1013 PF02545 Maf-like protein ZMO1014 PF01176 Translation initiation factor 1A / IF-1 ZMO1017 PF00005 ABC transporter ZMO1018 PF02405 Permease MlaE ZMO1019 PF01916 Deoxyhypusine synthase ZMO1020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ZMO1020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ZMO1021 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ZMO1022 PF00266 Aminotransferase class-V ZMO1023 PF06508 Queuosine biosynthesis protein QueC ZMO1029 PF00005 ABC transporter ZMO1032 PF04055 Radical SAM superfamily ZMO1036 PF00764 Arginosuccinate synthase ZMO1039 PF00317 Ribonucleotide reductase, all-alpha domain ZMO1039 PF03477 ATP cone domain ZMO1039 PF02867 Ribonucleotide reductase, barrel domain ZMO1041 PF00293 NUDIX domain ZMO1042 PF04536 TPM domain ZMO1044 PF01741 Large-conductance mechanosensitive channel, MscL ZMO1047 PF12849 PBP superfamily domain ZMO1048 PF00528 Binding-protein-dependent transport system inner membrane component ZMO1049 PF00528 Binding-protein-dependent transport system inner membrane component ZMO1050 PF00005 ABC transporter ZMO1052 PF01259 SAICAR synthetase ZMO1054 PF03989 DNA gyrase C-terminal domain, beta-propeller ZMO1054 PF00521 DNA gyrase/topoisomerase IV, subunit A ZMO1055 PF08448 PAS fold ZMO1055 PF00563 EAL domain ZMO1055 PF00990 Diguanylate cyclase, GGDEF domain ZMO1055 PF08447 PAS fold ZMO1056 PF01743 Poly A polymerase head domain ZMO1056 PF12627 Probable RNA and SrmB- binding site of polymerase A ZMO1056 PF12626 Polymerase A arginine-rich C-terminus ZMO1060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ZMO1060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ZMO1061 PF00158 Sigma-54 interaction domain ZMO1061 PF02954 Bacterial regulatory protein, Fis family ZMO1063 PF04012 PspA/IM30 family ZMO1067 PF02657 Fe-S metabolism associated domain ZMO1069 PF00684 DnaJ central domain ZMO1069 PF00226 DnaJ domain ZMO1069 PF01556 DnaJ C terminal domain ZMO1070 PF00448 SRP54-type protein, GTPase domain ZMO1070 PF02881 SRP54-type protein, helical bundle domain ZMO1071 PF00919 Uncharacterized protein family UPF0004 ZMO1071 PF04055 Radical SAM superfamily ZMO1072 PF01678 Diaminopimelate epimerase ZMO1075 PF02978 Signal peptide binding domain ZMO1075 PF00448 SRP54-type protein, GTPase domain ZMO1075 PF02881 SRP54-type protein, helical bundle domain ZMO1076 PF00886 Ribosomal protein S16 ZMO1077 PF01782 RimM N-terminal domain ZMO1077 PF05239 PRC-barrel domain ZMO1078 PF01746 tRNA (Guanine-1)-methyltransferase ZMO1079 PF01245 Ribosomal protein L19 ZMO1083 PF00535 Glycosyl transferase family 2 ZMO1083 PF07238 PilZ domain ZMO1083 PF03552 Cellulose synthase ZMO1084 PF03170 Bacterial cellulose synthase subunit ZMO1085 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ZMO1086 PF01270 Glycosyl hydrolases family 8 ZMO1087 PF13406 Transglycosylase SLT domain ZMO1088 PF03330 Lytic transglycolase ZMO1088 PF05036 Sporulation related domain ZMO1089 PF07943 Penicillin-binding protein 5, C-terminal domain ZMO1089 PF00768 D-alanyl-D-alanine carboxypeptidase ZMO1090 PF02223 Thymidylate kinase ZMO1091 PF12169 DNA polymerase III subunits gamma and tau domain III ZMO1092 PF09334 tRNA synthetases class I (M) ZMO1092 PF08264 Anticodon-binding domain of tRNA ZMO1093 PF01026 TatD related DNase ZMO1095 PF03819 MazG nucleotide pyrophosphohydrolase domain ZMO1096 PF17876 Cold shock domain ZMO1096 PF00575 S1 RNA binding domain ZMO1096 PF08461 Ribonuclease R winged-helix domain ZMO1096 PF00773 RNB domain ZMO1096 PF08206 Ribonuclease B OB domain ZMO1097 PF00085 Thioredoxin ZMO1098 PF00580 UvrD/REP helicase N-terminal domain ZMO1098 PF12705 PD-(D/E)XK nuclease superfamily ZMO1098 PF13361 UvrD-like helicase C-terminal domain ZMO1099 PF12705 PD-(D/E)XK nuclease superfamily ZMO1100 PF12804 MobA-like NTP transferase domain ZMO1101 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ZMO1102 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO1102 PF00512 His Kinase A (phospho-acceptor) domain ZMO1105 PF00989 PAS fold ZMO1105 PF00512 His Kinase A (phospho-acceptor) domain ZMO1105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO1105 PF13188 PAS domain ZMO1107 PF01037 Lrp/AsnC ligand binding domain ZMO1111 PF07690 Major Facilitator Superfamily ZMO1112 PF04279 Intracellular septation protein A ZMO1113 PF07992 Pyridine nucleotide-disulphide oxidoreductase ZMO1114 PF03167 Uracil DNA glycosylase superfamily ZMO1115 PF02673 Bacitracin resistance protein BacA ZMO1116 PF07992 Pyridine nucleotide-disulphide oxidoreductase ZMO1116 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ZMO1117 PF01645 Conserved region in glutamate synthase ZMO1117 PF00310 Glutamine amidotransferases class-II ZMO1117 PF01493 GXGXG motif ZMO1117 PF04898 Glutamate synthase central domain ZMO1118 PF00043 Glutathione S-transferase, C-terminal domain ZMO1118 PF13417 Glutathione S-transferase, N-terminal domain ZMO1121 PF13411 MerR HTH family regulatory protein ZMO1122 PF00216 Bacterial DNA-binding protein ZMO1124 PF00072 Response regulator receiver domain ZMO1124 PF00158 Sigma-54 interaction domain ZMO1124 PF02954 Bacterial regulatory protein, Fis family ZMO1125 PF00512 His Kinase A (phospho-acceptor) domain ZMO1125 PF00672 HAMP domain ZMO1125 PF00989 PAS fold ZMO1125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO1126 PF00158 Sigma-54 interaction domain ZMO1126 PF02954 Bacterial regulatory protein, Fis family ZMO1126 PF00072 Response regulator receiver domain ZMO1127 PF01207 Dihydrouridine synthase (Dus) ZMO1128 PF02542 YgbB family ZMO1128 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ZMO1130 PF00994 Probable molybdopterin binding domain ZMO1130 PF02464 Competence-damaged protein ZMO1130 PF18146 Damage-inducible protein CinA KH domain ZMO1131 PF03364 Polyketide cyclase / dehydrase and lipid transport ZMO1132 PF04055 Radical SAM superfamily ZMO1132 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ZMO1133 PF00484 Carbonic anhydrase ZMO1135 PF01523 Putative modulator of DNA gyrase ZMO1136 PF14376 Haem-binding domain ZMO1136 PF03150 Di-haem cytochrome c peroxidase ZMO1136 PF00034 Cytochrome c ZMO1139 PF00205 Thiamine pyrophosphate enzyme, central domain ZMO1139 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ZMO1139 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ZMO1140 PF10369 Small subunit of acetolactate synthase ZMO1141 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ZMO1141 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ZMO1142 PF07992 Pyridine nucleotide-disulphide oxidoreductase ZMO1145 PF01197 Ribosomal protein L31 ZMO1146 PF07977 FabA-like domain ZMO1148 PF01103 Surface antigen ZMO1148 PF07244 Surface antigen variable number repeat ZMO1149 PF02163 Peptidase family M50 ZMO1149 PF17820 PDZ domain ZMO1150 PF13288 DXP reductoisomerase C-terminal domain ZMO1150 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ZMO1150 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ZMO1152 PF01255 Putative undecaprenyl diphosphate synthase ZMO1153 PF01765 Ribosome recycling factor ZMO1154 PF00696 Amino acid kinase family ZMO1155 PF00889 Elongation factor TS ZMO1156 PF00318 Ribosomal protein S2 ZMO1158 PF01177 Asp/Glu/Hydantoin racemase ZMO1159 PF01066 CDP-alcohol phosphatidyltransferase ZMO1160 PF02666 Phosphatidylserine decarboxylase ZMO1162 PF11808 Phosphate regulon sensor protein PhoR ZMO1162 PF00989 PAS fold ZMO1162 PF00512 His Kinase A (phospho-acceptor) domain ZMO1162 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO1163 PF01895 PhoU domain ZMO1164 PF00072 Response regulator receiver domain ZMO1164 PF00486 Transcriptional regulatory protein, C terminal ZMO1166 PF00154 recA bacterial DNA recombination protein ZMO1167 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ZMO1167 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ZMO1169 PF01869 BadF/BadG/BcrA/BcrD ATPase family ZMO1171 PF00933 Glycosyl hydrolase family 3 N terminal domain ZMO1172 PF04996 Succinylarginine dihydrolase ZMO1176 PF00672 HAMP domain ZMO1176 PF00512 His Kinase A (phospho-acceptor) domain ZMO1176 PF16527 Two-component sensor protein CpxA, periplasmic domain ZMO1176 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO1177 PF00072 Response regulator receiver domain ZMO1177 PF00486 Transcriptional regulatory protein, C terminal ZMO1178 PF01502 Phosphoribosyl-AMP cyclohydrolase ZMO1179 PF05958 tRNA (Uracil-5-)-methyltransferase ZMO1180 PF01256 Carbohydrate kinase ZMO1180 PF03853 YjeF-related protein N-terminus ZMO1182 PF08544 GHMP kinases C terminal ZMO1182 PF00288 GHMP kinases N terminal domain ZMO1187 PF06827 Zinc finger found in FPG and IleRS ZMO1187 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ZMO1187 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ZMO1188 PF01209 ubiE/COQ5 methyltransferase family ZMO1189 PF03109 ABC1 family ZMO1190 PF04127 DNA / pantothenate metabolism flavoprotein ZMO1190 PF02441 Flavoprotein ZMO1191 PF00692 dUTPase ZMO1192 PF00899 ThiF family ZMO1193 PF13368 Topoisomerase C-terminal repeat ZMO1193 PF01396 Topoisomerase DNA binding C4 zinc finger ZMO1193 PF01751 Toprim domain ZMO1193 PF01131 DNA topoisomerase ZMO1194 PF02481 DNA recombination-mediator protein A ZMO1194 PF17782 DprA winged helix domain ZMO1195 PF02660 Glycerol-3-phosphate acyltransferase ZMO1196 PF07690 Major Facilitator Superfamily ZMO1197 PF01177 Asp/Glu/Hydantoin racemase ZMO1198 PF00155 Aminotransferase class I and II ZMO1200 PF02502 Ribose/Galactose Isomerase ZMO1201 PF00464 Serine hydroxymethyltransferase ZMO1202 PF03477 ATP cone domain ZMO1203 PF00588 SpoU rRNA Methylase family ZMO1206 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO1206 PF03466 LysR substrate binding domain ZMO1207 PF00795 Carbon-nitrogen hydrolase ZMO1209 PF02705 K+ potassium transporter ZMO1211 PF07992 Pyridine nucleotide-disulphide oxidoreductase ZMO1211 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ZMO1212 PF00342 Phosphoglucose isomerase ZMO1214 PF00271 Helicase conserved C-terminal domain ZMO1214 PF00270 DEAD/DEAH box helicase ZMO1216 PF12282 Signal transduction histidine kinase ZMO1216 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO1216 PF07568 Histidine kinase ZMO1218 PF00902 Sec-independent protein translocase protein (TatC) ZMO1219 PF02416 mttA/Hcf106 family ZMO1220 PF02416 mttA/Hcf106 family ZMO1223 PF00698 Acyl transferase domain ZMO1225 PF01250 Ribosomal protein S6 ZMO1226 PF01084 Ribosomal protein S18 ZMO1227 PF03948 Ribosomal protein L9, C-terminal domain ZMO1227 PF01281 Ribosomal protein L9, N-terminal domain ZMO1228 PF13378 Enolase C-terminal domain-like ZMO1228 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ZMO1229 PF01227 GTP cyclohydrolase I ZMO1231 PF02272 DHHA1 domain ZMO1231 PF17768 RecJ OB domain ZMO1231 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ZMO1231 PF01368 DHH family ZMO1233 PF00483 Nucleotidyl transferase ZMO1233 PF01050 Mannose-6-phosphate isomerase ZMO1234 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ZMO1234 PF02779 Transketolase, pyrimidine binding domain ZMO1234 PF02780 Transketolase, C-terminal domain ZMO1236 PF08240 Alcohol dehydrogenase GroES-like domain ZMO1236 PF00107 Zinc-binding dehydrogenase ZMO1237 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ZMO1237 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ZMO1240 PF00300 Histidine phosphatase superfamily (branch 1) ZMO1242 PF00246 Zinc carboxypeptidase ZMO1242 PF18027 Cytosolic carboxypeptidase N-terminal domain ZMO1243 PF13590 Domain of unknown function (DUF4136) ZMO1246 PF00444 Ribosomal protein L36 ZMO1253 PF03918 Cytochrome C biogenesis protein ZMO1254 PF08534 Redoxin ZMO1255 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ZMO1255 PF01578 Cytochrome C assembly protein ZMO1256 PF03100 CcmE ZMO1258 PF01578 Cytochrome C assembly protein ZMO1260 PF07715 TonB-dependent Receptor Plug Domain ZMO1260 PF00593 TonB dependent receptor ZMO1261 PF09084 NMT1/THI5 like ZMO1262 PF00528 Binding-protein-dependent transport system inner membrane component ZMO1263 PF00005 ABC transporter ZMO1264 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ZMO1264 PF13378 Enolase C-terminal domain-like ZMO1267 PF02540 NAD synthase ZMO1267 PF00958 GMP synthase C terminal domain ZMO1267 PF00117 Glutamine amidotransferase class-I ZMO1270 PF00155 Aminotransferase class I and II ZMO1271 PF10414 Sirohaem synthase dimerisation region ZMO1271 PF14824 Sirohaem biosynthesis protein central ZMO1271 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ZMO1272 PF00171 Aldehyde dehydrogenase family ZMO1275 PF13291 ACT domain ZMO1275 PF00291 Pyridoxal-phosphate dependent enzyme ZMO1277 PF02618 YceG-like family ZMO1278 PF00109 Beta-ketoacyl synthase, N-terminal domain ZMO1278 PF02801 Beta-ketoacyl synthase, C-terminal domain ZMO1279 PF00550 Phosphopantetheine attachment site ZMO1283 PF00356 Bacterial regulatory proteins, lacI family ZMO1284 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ZMO1284 PF00034 Cytochrome c ZMO1285 PF00732 GMC oxidoreductase ZMO1285 PF05199 GMC oxidoreductase ZMO1287 PF00534 Glycosyl transferases group 1 ZMO1287 PF13439 Glycosyltransferase Family 4 ZMO1288 PF07690 Major Facilitator Superfamily ZMO1289 PF04226 Transglycosylase associated protein ZMO1294 PF13580 SIS domain ZMO1298 PF07715 TonB-dependent Receptor Plug Domain ZMO1298 PF00593 TonB dependent receptor ZMO1302 PF03099 Biotin/lipoate A/B protein ligase family ZMO1303 PF03807 NADP oxidoreductase coenzyme F420-dependent ZMO1303 PF14748 Pyrroline-5-carboxylate reductase dimerisation ZMO1306 PF01728 FtsJ-like methyltransferase ZMO1306 PF01479 S4 domain ZMO1307 PF05683 Fumarase C-terminus ZMO1307 PF05681 Fumarate hydratase (Fumerase) ZMO1309 PF00883 Cytosol aminopeptidase family, catalytic domain ZMO1309 PF02789 Cytosol aminopeptidase family, N-terminal domain ZMO1311 PF04453 LPS transport system D ZMO1312 PF00639 PPIC-type PPIASE domain ZMO1312 PF09312 SurA N-terminal domain ZMO1313 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ZMO1314 PF00398 Ribosomal RNA adenine dimethylase ZMO1316 PF01943 Polysaccharide biosynthesis protein ZMO1320 PF01189 16S rRNA methyltransferase RsmB/F ZMO1320 PF01029 NusB family ZMO1321 PF00478 IMP dehydrogenase / GMP reductase domain ZMO1321 PF00571 CBS domain ZMO1322 PF00486 Transcriptional regulatory protein, C terminal ZMO1322 PF00072 Response regulator receiver domain ZMO1323 PF13756 Stimulus-sensing domain ZMO1323 PF13755 Sensor N-terminal transmembrane domain ZMO1323 PF00512 His Kinase A (phospho-acceptor) domain ZMO1323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO1323 PF00672 HAMP domain ZMO1324 PF07475 HPr Serine kinase C-terminal domain ZMO1324 PF02603 HPr Serine kinase N terminus ZMO1325 PF03668 P-loop ATPase protein family ZMO1326 PF03610 PTS system fructose IIA component ZMO1326 PF03830 PTS system sorbose subfamily IIB component ZMO1327 PF00381 PTS HPr component phosphorylation site ZMO1328 PF00588 SpoU rRNA Methylase family ZMO1328 PF08032 RNA 2'-O ribose methyltransferase substrate binding ZMO1329 PF01513 ATP-NAD kinase ZMO1331 PF00924 Mechanosensitive ion channel ZMO1334 PF04264 YceI-like domain ZMO1335 PF03358 NADPH-dependent FMN reductase ZMO1336 PF03466 LysR substrate binding domain ZMO1336 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO1337 PF02678 Pirin ZMO1337 PF17954 Quercetinase C-terminal cupin domain ZMO1338 PF01810 LysE type translocator ZMO1341 PF04228 Putative neutral zinc metallopeptidase ZMO1344 PF00248 Aldo/keto reductase family ZMO1345 PF11940 Domain of unknown function (DUF3458) Ig-like fold ZMO1345 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ZMO1345 PF01433 Peptidase family M1 domain ZMO1347 PF01212 Beta-eliminating lyase ZMO1348 PF00557 Metallopeptidase family M24 ZMO1350 PF02464 Competence-damaged protein ZMO1350 PF00994 Probable molybdopterin binding domain ZMO1350 PF18146 Damage-inducible protein CinA KH domain ZMO1351 PF01738 Dienelactone hydrolase family ZMO1352 PF01027 Inhibitor of apoptosis-promoting Bax1 ZMO1353 PF03928 Haem-degrading ZMO1354 PF00691 OmpA family ZMO1355 PF12848 ABC transporter ZMO1355 PF00005 ABC transporter ZMO1356 PF00308 Bacterial dnaA protein ZMO1356 PF08299 Bacterial dnaA protein helix-turn-helix ZMO1356 PF11638 DnaA N-terminal domain ZMO1358 PF01649 Ribosomal protein S20 ZMO1360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ZMO1360 PF00205 Thiamine pyrophosphate enzyme, central domain ZMO1360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ZMO1364 PF04055 Radical SAM superfamily ZMO1365 PF00990 Diguanylate cyclase, GGDEF domain ZMO1366 PF01479 S4 domain ZMO1366 PF00163 Ribosomal protein S4/S9 N-terminal domain ZMO1369 PF04371 Porphyromonas-type peptidyl-arginine deiminase ZMO1370 PF00795 Carbon-nitrogen hydrolase ZMO1372 PF00106 short chain dehydrogenase ZMO1374 PF08338 Domain of unknown function (DUF1731) ZMO1374 PF01370 NAD dependent epimerase/dehydratase family ZMO1375 PF00035 Double-stranded RNA binding motif ZMO1375 PF14622 Ribonuclease-III-like ZMO1382 PF00202 Aminotransferase class-III ZMO1384 PF01926 50S ribosome-binding GTPase ZMO1384 PF07650 KH domain ZMO1387 PF00072 Response regulator receiver domain ZMO1387 PF00486 Transcriptional regulatory protein, C terminal ZMO1401 PF03372 Endonuclease/Exonuclease/phosphatase family ZMO1402 PF01521 Iron-sulphur cluster biosynthesis ZMO1403 PF01476 LysM domain ZMO1403 PF08525 Opacity-associated protein A N-terminal motif ZMO1403 PF01551 Peptidase family M23 ZMO1404 PF08281 Sigma-70, region 4 ZMO1404 PF04542 Sigma-70 region 2 ZMO1405 PF00072 Response regulator receiver domain ZMO1406 PF00561 alpha/beta hydrolase fold ZMO1407 PF02774 Semialdehyde dehydrogenase, dimerisation domain ZMO1407 PF01118 Semialdehyde dehydrogenase, NAD binding domain ZMO1408 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ZMO1408 PF00326 Prolyl oligopeptidase family ZMO1410 PF00210 Ferritin-like domain ZMO1411 PF01475 Ferric uptake regulator family ZMO1412 PF05443 ROS/MUCR transcriptional regulator protein ZMO1414 PF00814 Glycoprotease family ZMO1417 PF00271 Helicase conserved C-terminal domain ZMO1417 PF00270 DEAD/DEAH box helicase ZMO1419 PF01040 UbiA prenyltransferase family ZMO1420 PF00731 AIR carboxylase ZMO1421 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ZMO1421 PF02222 ATP-grasp domain ZMO1422 PF05193 Peptidase M16 inactive domain ZMO1422 PF00675 Insulinase (Peptidase family M16) ZMO1423 PF05193 Peptidase M16 inactive domain ZMO1423 PF00675 Insulinase (Peptidase family M16) ZMO1424 PF17871 AAA lid domain ZMO1424 PF07724 AAA domain (Cdc48 subfamily) ZMO1424 PF00004 ATPase family associated with various cellular activities (AAA) ZMO1424 PF10431 C-terminal, D2-small domain, of ClpB protein ZMO1424 PF02861 Clp amino terminal domain, pathogenicity island component ZMO1425 PF02581 Thiamine monophosphate synthase ZMO1426 PF04002 RadC-like JAB domain ZMO1428 PF00781 Diacylglycerol kinase catalytic domain ZMO1430 PF13533 Biotin-lipoyl like ZMO1435 PF13603 Leucyl-tRNA synthetase, Domain 2 ZMO1435 PF08264 Anticodon-binding domain of tRNA ZMO1435 PF00133 tRNA synthetases class I (I, L, M and V) ZMO1436 PF12100 Domain of unknown function (DUF3576) ZMO1438 PF01037 Lrp/AsnC ligand binding domain ZMO1438 PF13404 AsnC-type helix-turn-helix domain ZMO1439 PF00795 Carbon-nitrogen hydrolase ZMO1441 PF01266 FAD dependent oxidoreductase ZMO1443 PF01943 Polysaccharide biosynthesis protein ZMO1444 PF05746 DALR anticodon binding domain ZMO1444 PF02092 Glycyl-tRNA synthetase beta subunit ZMO1446 PF02091 Glycyl-tRNA synthetase alpha subunit ZMO1449 PF01232 Mannitol dehydrogenase Rossmann domain ZMO1449 PF08125 Mannitol dehydrogenase C-terminal domain ZMO1450 PF00875 DNA photolyase ZMO1450 PF03441 FAD binding domain of DNA photolyase ZMO1452 PF07690 Major Facilitator Superfamily ZMO1455 PF00239 Resolvase, N terminal domain ZMO1455 PF02796 Helix-turn-helix domain of resolvase ZMO1467 PF01061 ABC-2 type transporter ZMO1475 PF07715 TonB-dependent Receptor Plug Domain ZMO1475 PF00593 TonB dependent receptor ZMO1478 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ZMO1479 PF01012 Electron transfer flavoprotein domain ZMO1479 PF00766 Electron transfer flavoprotein FAD-binding domain ZMO1480 PF01012 Electron transfer flavoprotein domain ZMO1481 PF00549 CoA-ligase ZMO1481 PF08442 ATP-grasp domain ZMO1484 PF00580 UvrD/REP helicase N-terminal domain ZMO1484 PF13361 UvrD-like helicase C-terminal domain ZMO1485 PF01966 HD domain ZMO1487 PF05231 MASE1 ZMO1487 PF00563 EAL domain ZMO1488 PF00793 DAHP synthetase I family ZMO1489 PF02348 Cytidylyltransferase ZMO1494 PF00696 Amino acid kinase family ZMO1495 PF01923 Cobalamin adenosyltransferase ZMO1496 PF00311 Phosphoenolpyruvate carboxylase ZMO1497 PF13520 Amino acid permease ZMO1498 PF01230 HIT domain ZMO1499 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ZMO1500 PF00977 Histidine biosynthesis protein ZMO1501 PF00977 Histidine biosynthesis protein ZMO1502 PF00117 Glutamine amidotransferase class-I ZMO1503 PF00475 Imidazoleglycerol-phosphate dehydratase ZMO1507 PF00719 Inorganic pyrophosphatase ZMO1508 PF13393 Histidyl-tRNA synthetase ZMO1509 PF03462 PCRF domain ZMO1509 PF00472 RF-1 domain ZMO1510 PF05175 Methyltransferase small domain ZMO1510 PF17827 PrmC N-terminal domain ZMO1512 PF00664 ABC transporter transmembrane region ZMO1512 PF00005 ABC transporter ZMO1513 PF01588 Putative tRNA binding domain ZMO1513 PF03484 tRNA synthetase B5 domain ZMO1513 PF03483 B3/4 domain ZMO1513 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ZMO1513 PF03147 Ferredoxin-fold anticodon binding domain ZMO1514 PF01409 tRNA synthetases class II core domain (F) ZMO1514 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ZMO1515 PF00453 Ribosomal protein L20 ZMO1516 PF01632 Ribosomal protein L35 ZMO1518 PF00459 Inositol monophosphatase family ZMO1519 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ZMO1519 PF14572 Phosphoribosyl synthetase-associated domain ZMO1522 PF07715 TonB-dependent Receptor Plug Domain ZMO1522 PF00593 TonB dependent receptor ZMO1525 PF02321 Outer membrane efflux protein ZMO1527 PF00873 AcrB/AcrD/AcrF family ZMO1528 PF00873 AcrB/AcrD/AcrF family ZMO1529 PF13533 Biotin-lipoyl like ZMO1530 PF01380 SIS domain ZMO1530 PF00571 CBS domain ZMO1531 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ZMO1538 PF02811 PHP domain ZMO1538 PF14579 Helix-hairpin-helix motif ZMO1538 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ZMO1538 PF07733 Bacterial DNA polymerase III alpha NTPase domain ZMO1541 PF02421 Ferrous iron transport protein B ZMO1541 PF07664 Ferrous iron transport protein B C terminus ZMO1541 PF07670 Nucleoside recognition ZMO1542 PF00436 Single-strand binding protein family ZMO1543 PF11775 Cobalamin biosynthesis protein CobT VWA domain ZMO1543 PF06213 Cobalamin biosynthesis protein CobT ZMO1544 PF12556 Cobaltochelatase CobS subunit N terminal ZMO1544 PF08406 CbbQ/NirQ/NorQ C-terminal ZMO1544 PF07728 AAA domain (dynein-related subfamily) ZMO1545 PF00226 DnaJ domain ZMO1548 PF13243 Squalene-hopene cyclase C-terminal domain ZMO1548 PF13249 Squalene-hopene cyclase N-terminal domain ZMO1550 PF01634 ATP phosphoribosyltransferase ZMO1551 PF00815 Histidinol dehydrogenase ZMO1552 PF01029 NusB family ZMO1553 PF00586 AIR synthase related protein, N-terminal domain ZMO1553 PF02769 AIR synthase related protein, C-terminal domain ZMO1554 PF04452 RNA methyltransferase ZMO1556 PF04107 Glutamate-cysteine ligase family 2(GCS2) ZMO1557 PF13537 Glutamine amidotransferase domain ZMO1557 PF00156 Phosphoribosyl transferase domain ZMO1561 PF00106 short chain dehydrogenase ZMO1562 PF00293 NUDIX domain ZMO1566 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ZMO1569 PF04055 Radical SAM superfamily ZMO1570 PF01228 Glycine radical ZMO1570 PF02901 Pyruvate formate lyase-like ZMO1571 PF01654 Cytochrome bd terminal oxidase subunit I ZMO1572 PF02322 Cytochrome bd terminal oxidase subunit II ZMO1574 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO1574 PF03466 LysR substrate binding domain ZMO1576 PF00106 short chain dehydrogenase ZMO1577 PF07690 Major Facilitator Superfamily ZMO1579 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ZMO1583 PF00986 DNA gyrase B subunit, carboxyl terminus ZMO1583 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO1583 PF01751 Toprim domain ZMO1583 PF00204 DNA gyrase B ZMO1584 PF02463 RecF/RecN/SMC N terminal domain ZMO1586 PF00210 Ferritin-like domain ZMO1588 PF17755 UvrA DNA-binding domain ZMO1588 PF17760 UvrA interaction domain ZMO1590 PF00005 ABC transporter ZMO1591 PF02405 Permease MlaE ZMO1592 PF00842 Alanine racemase, C-terminal domain ZMO1592 PF01168 Alanine racemase, N-terminal domain ZMO1596 PF00465 Iron-containing alcohol dehydrogenase ZMO1598 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ZMO1598 PF02780 Transketolase, C-terminal domain ZMO1598 PF02779 Transketolase, pyrimidine binding domain ZMO1600 PF01636 Phosphotransferase enzyme family ZMO1601 PF00075 RNase H ZMO1603 PF00753 Metallo-beta-lactamase superfamily ZMO1603 PF04273 Putative phosphatase (DUF442) ZMO1605 PF00364 Biotin-requiring enzyme ZMO1605 PF02779 Transketolase, pyrimidine binding domain ZMO1605 PF02780 Transketolase, C-terminal domain ZMO1606 PF00676 Dehydrogenase E1 component ZMO1608 PF00113 Enolase, C-terminal TIM barrel domain ZMO1608 PF03952 Enolase, N-terminal domain ZMO1615 PF01272 Transcription elongation factor, GreA/GreB, C-term ZMO1615 PF03449 Transcription elongation factor, N-terminal ZMO1618 PF00117 Glutamine amidotransferase class-I ZMO1618 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ZMO1622 PF01807 CHC2 zinc finger ZMO1622 PF10410 DnaB-helicase binding domain of primase ZMO1622 PF08275 DNA primase catalytic core, N-terminal domain ZMO1622 PF08278 DNA primase DnaG DnaB-binding ZMO1623 PF04545 Sigma-70, region 4 ZMO1623 PF04539 Sigma-70 region 3 ZMO1623 PF04542 Sigma-70 region 2 ZMO1623 PF03979 Sigma-70 factor, region 1.1 ZMO1623 PF04546 Sigma-70, non-essential region ZMO1623 PF00140 Sigma-70 factor, region 1.2 ZMO1624 PF13335 Magnesium chelatase, subunit ChlI C-terminal ZMO1624 PF01078 Magnesium chelatase, subunit ChlI ZMO1625 PF00825 Ribonuclease P ZMO1626 PF14849 YidC periplasmic domain ZMO1626 PF02096 60Kd inner membrane protein ZMO1627 PF01926 50S ribosome-binding GTPase ZMO1631 PF00593 TonB dependent receptor ZMO1631 PF07715 TonB-dependent Receptor Plug Domain ZMO1632 PF01546 Peptidase family M20/M25/M40 ZMO1632 PF07687 Peptidase dimerisation domain ZMO1638 PF02556 Preprotein translocase subunit SecB ZMO1639 PF03023 Lipid II flippase MurJ ZMO1640 PF00579 tRNA synthetases class I (W and Y) ZMO1642 PF03702 Anhydro-N-acetylmuramic acid kinase ZMO1643 PF00579 tRNA synthetases class I (W and Y) ZMO1644 PF17191 RecG wedge domain ZMO1644 PF00271 Helicase conserved C-terminal domain ZMO1644 PF00270 DEAD/DEAH box helicase ZMO1646 PF03461 TRCF domain ZMO1646 PF00271 Helicase conserved C-terminal domain ZMO1646 PF00270 DEAD/DEAH box helicase ZMO1646 PF02559 CarD-like/TRCF domain ZMO1646 PF17757 UvrB interaction domain ZMO1647 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ZMO1648 PF03167 Uracil DNA glycosylase superfamily ZMO1649 PF08450 SMP-30/Gluconolactonase/LRE-like region ZMO1650 PF00144 Beta-lactamase ZMO1651 PF05524 PEP-utilising enzyme, N-terminal ZMO1651 PF02896 PEP-utilising enzyme, TIM barrel domain ZMO1651 PF00391 PEP-utilising enzyme, mobile domain ZMO1652 PF03060 Nitronate monooxygenase ZMO1653 PF00696 Amino acid kinase family ZMO1653 PF13840 ACT domain ZMO1653 PF01842 ACT domain ZMO1654 PF08241 Methyltransferase domain ZMO1658 PF01171 PP-loop family ZMO1659 PF17862 AAA+ lid domain ZMO1659 PF00004 ATPase family associated with various cellular activities (AAA) ZMO1659 PF01434 Peptidase family M41 ZMO1661 PF00171 Aldehyde dehydrogenase family ZMO1662 PF01467 Cytidylyltransferase-like ZMO1664 PF02590 Predicted SPOUT methyltransferase ZMO1667 PF13180 PDZ domain ZMO1667 PF03572 Peptidase family S41 ZMO1673 PF00248 Aldo/keto reductase family ZMO1677 PF14815 NUDIX domain ZMO1677 PF00730 HhH-GPD superfamily base excision DNA repair protein ZMO1678 PF01842 ACT domain ZMO1678 PF00800 Prephenate dehydratase ZMO1681 PF02080 TrkA-C domain ZMO1681 PF06826 Predicted Permease Membrane Region ZMO1682 PF00155 Aminotransferase class I and II ZMO1683 PF17763 Glutaminase/Asparaginase C-terminal domain ZMO1683 PF00710 Asparaginase, N-terminal ZMO1685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ZMO1685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ZMO1685 PF01842 ACT domain ZMO1686 PF13393 Histidyl-tRNA synthetase ZMO1687 PF00709 Adenylosuccinate synthetase ZMO1689 PF01979 Amidohydrolase family ZMO1690 PF00684 DnaJ central domain ZMO1690 PF01556 DnaJ C terminal domain ZMO1690 PF00226 DnaJ domain ZMO1691 PF03631 Virulence factor BrkB ZMO1693 PF01264 Chorismate synthase ZMO1697 PF01638 HxlR-like helix-turn-helix ZMO1698 PF00925 GTP cyclohydrolase II ZMO1699 PF03372 Endonuclease/Exonuclease/phosphatase family ZMO1701 PF03548 Outer membrane lipoprotein carrier protein LolA ZMO1702 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ZMO1702 PF01580 FtsK/SpoIIIE family ZMO1702 PF17854 FtsK alpha domain ZMO1702 PF09397 Ftsk gamma domain ZMO1703 PF01494 FAD binding domain ZMO1704 PF05362 Lon protease (S16) C-terminal proteolytic domain ZMO1704 PF00004 ATPase family associated with various cellular activities (AAA) ZMO1704 PF02190 ATP-dependent protease La (LON) substrate-binding domain ZMO1707 PF00156 Phosphoribosyl transferase domain ZMO1708 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ZMO1709 PF01648 4'-phosphopantetheinyl transferase superfamily ZMO1710 PF10502 Signal peptidase, peptidase S26 ZMO1711 PF01594 AI-2E family transporter ZMO1712 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ZMO1712 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ZMO1713 PF01165 Ribosomal protein S21 ZMO1715 PF02472 Biopolymer transport protein ExbD/TolR ZMO1716 PF01618 MotA/TolQ/ExbB proton channel family ZMO1719 PF00480 ROK family ZMO1720 PF01192 RNA polymerase Rpb6 ZMO1722 PF00107 Zinc-binding dehydrogenase ZMO1722 PF08240 Alcohol dehydrogenase GroES-like domain ZMO1724 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ZMO1725 PF02617 ATP-dependent Clp protease adaptor protein ClpS ZMO1727 PF00155 Aminotransferase class I and II ZMO1730 PF00132 Bacterial transferase hexapeptide (six repeats) ZMO1732 PF00578 AhpC/TSA family ZMO1733 PF03466 LysR substrate binding domain ZMO1733 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO1738 PF00072 Response regulator receiver domain ZMO1738 PF04397 LytTr DNA-binding domain ZMO1739 PF06580 Histidine kinase ZMO1739 PF07694 5TMR of 5TMR-LYT ZMO1739 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO1741 PF06421 GTP-binding protein LepA C-terminus ZMO1741 PF03144 Elongation factor Tu domain 2 ZMO1741 PF00009 Elongation factor Tu GTP binding domain ZMO1741 PF00679 Elongation factor G C-terminus ZMO1745 PF02607 B12 binding domain ZMO1745 PF02574 Homocysteine S-methyltransferase ZMO1745 PF00809 Pterin binding enzyme ZMO1745 PF02965 Vitamin B12 dependent methionine synthase, activation domain ZMO1745 PF02310 B12 binding domain ZMO1746 PF02574 Homocysteine S-methyltransferase ZMO1746 PF00809 Pterin binding enzyme ZMO1746 PF02310 B12 binding domain ZMO1746 PF02607 B12 binding domain ZMO1746 PF02965 Vitamin B12 dependent methionine synthase, activation domain ZMO1747 PF02219 Methylenetetrahydrofolate reductase ZMO1748 PF01022 Bacterial regulatory protein, arsR family ZMO1749 PF04333 MlaA lipoprotein ZMO1753 PF00970 Oxidoreductase FAD-binding domain ZMO1753 PF00175 Oxidoreductase NAD-binding domain ZMO1754 PF00171 Aldehyde dehydrogenase family ZMO1755 PF00303 Thymidylate synthase ZMO1756 PF02447 GntP family permease ZMO1758 PF13525 Outer membrane lipoprotein ZMO1761 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ZMO1762 PF02021 Uncharacterised protein family UPF0102 ZMO1764 PF03734 L,D-transpeptidase catalytic domain ZMO1764 PF01471 Putative peptidoglycan binding domain ZMO1766 PF01544 CorA-like Mg2+ transporter protein ZMO1767 PF00483 Nucleotidyl transferase ZMO1768 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ZMO1768 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ZMO1770 PF14698 Argininosuccinate lyase C-terminal ZMO1770 PF00206 Lyase ZMO1771 PF00465 Iron-containing alcohol dehydrogenase ZMO1772 PF08240 Alcohol dehydrogenase GroES-like domain ZMO1772 PF00107 Zinc-binding dehydrogenase ZMO1773 PF00248 Aldo/keto reductase family ZMO1776 PF01433 Peptidase family M1 domain ZMO1781 PF00924 Mechanosensitive ion channel ZMO1790 PF00664 ABC transporter transmembrane region ZMO1790 PF00005 ABC transporter ZMO1792 PF00920 Dehydratase family ZMO1793 PF03466 LysR substrate binding domain ZMO1793 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO1796 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ZMO1797 PF02224 Cytidylate kinase ZMO1798 PF00575 S1 RNA binding domain ZMO1800 PF02567 Phenazine biosynthesis-like protein ZMO1801 PF00216 Bacterial DNA-binding protein ZMO1804 PF13520 Amino acid permease ZMO1805 PF13419 Haloacid dehalogenase-like hydrolase ZMO1806 PF12464 Maltose acetyltransferase ZMO1806 PF14602 Hexapeptide repeat of succinyl-transferase ZMO1808 PF03658 RnfH family Ubiquitin ZMO1809 PF02508 Rnf-Nqr subunit, membrane protein ZMO1810 PF04205 FMN-binding domain ZMO1811 PF03116 NQR2, RnfD, RnfE family ZMO1812 PF13237 4Fe-4S dicluster domain ZMO1812 PF13375 RnfC Barrel sandwich hybrid domain ZMO1812 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ZMO1812 PF10531 SLBB domain ZMO1813 PF04060 Putative Fe-S cluster ZMO1814 PF02508 Rnf-Nqr subunit, membrane protein ZMO1816 PF00158 Sigma-54 interaction domain ZMO1816 PF02954 Bacterial regulatory protein, Fis family ZMO1816 PF01590 GAF domain ZMO1817 PF02579 Dinitrogenase iron-molybdenum cofactor ZMO1817 PF04055 Radical SAM superfamily ZMO1818 PF12838 4Fe-4S dicluster domain ZMO1819 PF04319 NifZ domain ZMO1820 PF06988 NifT/FixU protein ZMO1822 PF00593 TonB dependent receptor ZMO1822 PF07715 TonB-dependent Receptor Plug Domain ZMO1823 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ZMO1824 PF00148 Nitrogenase component 1 type Oxidoreductase ZMO1825 PF11844 Domain of unknown function (DUF3364) ZMO1825 PF00148 Nitrogenase component 1 type Oxidoreductase ZMO1826 PF00148 Nitrogenase component 1 type Oxidoreductase ZMO1827 PF00148 Nitrogenase component 1 type Oxidoreductase ZMO1828 PF02579 Dinitrogenase iron-molybdenum cofactor ZMO1829 PF03270 Protein of unknown function, DUF269 ZMO1831 PF04891 NifQ ZMO1832 PF01521 Iron-sulphur cluster biosynthesis ZMO1834 PF00266 Aminotransferase class-V ZMO1835 PF00682 HMGL-like ZMO1836 PF03206 Nitrogen fixation protein NifW ZMO1837 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ZMO1837 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ZMO1838 PF03459 TOBE domain ZMO1844 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ZMO1844 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ZMO1845 PF03831 PhnA domain ZMO1845 PF08274 PhnA Zinc-Ribbon ZMO1846 PF00005 ABC transporter ZMO1851 PF00258 Flavodoxin ZMO1853 PF00701 Dihydrodipicolinate synthetase family ZMO1854 PF00155 Aminotransferase class I and II ZMO1854 PF00392 Bacterial regulatory proteins, gntR family ZMO1855 PF00117 Glutamine amidotransferase class-I ZMO1856 PF07690 Major Facilitator Superfamily ZMO1857 PF03466 LysR substrate binding domain ZMO1857 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO1861 PF03060 Nitronate monooxygenase ZMO1862 PF13419 Haloacid dehalogenase-like hydrolase ZMO1863 PF13419 Haloacid dehalogenase-like hydrolase ZMO1866 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ZMO1866 PF12706 Beta-lactamase superfamily domain ZMO1866 PF17770 Ribonuclease J C-terminal domain ZMO1867 PF03309 Type III pantothenate kinase ZMO1868 PF03309 Type III pantothenate kinase ZMO1868 PF02237 Biotin protein ligase C terminal domain ZMO1868 PF03099 Biotin/lipoate A/B protein ligase family ZMO1870 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ZMO1870 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ZMO1873 PF00462 Glutaredoxin ZMO1878 PF08264 Anticodon-binding domain of tRNA ZMO1878 PF10458 Valyl tRNA synthetase tRNA binding arm ZMO1878 PF00133 tRNA synthetases class I (I, L, M and V) ZMO1879 PF00490 Delta-aminolevulinic acid dehydratase ZMO1882 PF05145 Transition state regulatory protein AbrB ZMO1883 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ZMO1884 PF02677 Epoxyqueuosine reductase QueH ZMO1885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ZMO1886 PF05145 Transition state regulatory protein AbrB ZMO1887 PF00857 Isochorismatase family ZMO1890 PF00675 Insulinase (Peptidase family M16) ZMO1890 PF05193 Peptidase M16 inactive domain ZMO1891 PF00291 Pyridoxal-phosphate dependent enzyme ZMO1891 PF14821 Threonine synthase N terminus ZMO1895 PF00294 pfkB family carbohydrate kinase ZMO1896 PF07549 SecD/SecF GG Motif ZMO1896 PF02355 Protein export membrane protein ZMO1897 PF02355 Protein export membrane protein ZMO1897 PF07549 SecD/SecF GG Motif ZMO1898 PF02699 Preprotein translocase subunit ZMO1899 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ZMO1899 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ZMO1900 PF02504 Fatty acid synthesis protein ZMO1903 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ZMO1903 PF03900 Porphobilinogen deaminase, C-terminal domain ZMO1904 PF00814 Glycoprotease family ZMO1905 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ZMO1905 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ZMO1906 PF05198 Translation initiation factor IF-3, N-terminal domain ZMO1906 PF00707 Translation initiation factor IF-3, C-terminal domain ZMO1907 PF01624 MutS domain I ZMO1907 PF05188 MutS domain II ZMO1907 PF05192 MutS domain III ZMO1907 PF05190 MutS family domain IV ZMO1907 PF00488 MutS domain V ZMO1910 PF01386 Ribosomal L25p family ZMO1910 PF14693 Ribosomal protein TL5, C-terminal domain ZMO1911 PF01195 Peptidyl-tRNA hydrolase ZMO1912 PF01926 50S ribosome-binding GTPase ZMO1912 PF06071 Protein of unknown function (DUF933) ZMO1913 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ZMO1913 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ZMO1914 PF00589 Phage integrase family ZMO1914 PF02899 Phage integrase, N-terminal SAM-like domain ZMO1915 PF13649 Methyltransferase domain ZMO1917 PF00155 Aminotransferase class I and II ZMO1918 PF00202 Aminotransferase class-III ZMO1921 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ZMO1921 PF00270 DEAD/DEAH box helicase ZMO1921 PF17764 3′ DNA-binding domain (3′BD) ZMO1921 PF18074 Primosomal protein N C-terminal domain ZMO1922 PF05159 Capsule polysaccharide biosynthesis protein ZMO1923 PF00884 Sulfatase ZMO1927 PF01343 Peptidase family S49 ZMO1928 PF00166 Chaperonin 10 Kd subunit ZMO1929 PF00118 TCP-1/cpn60 chaperonin family ZMO1931 PF17761 DUF1016 N-terminal domain ZMO1931 PF06250 YhcG PDDEXK nuclease domain ZMO1944 PF00155 Aminotransferase class I and II ZMO1944 PF00392 Bacterial regulatory proteins, gntR family ZMO1945 PF02567 Phenazine biosynthesis-like protein ZMO1947 PF01042 Endoribonuclease L-PSP ZMO1948 PF04073 Aminoacyl-tRNA editing domain ZMO1949 PF02525 Flavodoxin-like fold ZMO1951 PF03737 Aldolase/RraA ZMO1952 PF02548 Ketopantoate hydroxymethyltransferase ZMO1954 PF02569 Pantoate-beta-alanine ligase ZMO1955 PF00390 Malic enzyme, N-terminal domain ZMO1955 PF03949 Malic enzyme, NAD binding domain ZMO1956 PF02463 RecF/RecN/SMC N terminal domain ZMO1957 PF00534 Glycosyl transferases group 1 ZMO1957 PF13439 Glycosyltransferase Family 4 ZMO1962 PF00989 PAS fold ZMO1962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZMO1962 PF00512 His Kinase A (phospho-acceptor) domain ZMO1962 PF16736 Single Cache-like ZMO1963 PF00285 Citrate synthase, C-terminal domain ZMO1964 PF00749 tRNA synthetases class I (E and Q), catalytic domain ZMO1965 PF03772 Competence protein ZMO1965 PF00753 Metallo-beta-lactamase superfamily ZMO1970 PF02548 Ketopantoate hydroxymethyltransferase ZMO1974 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZMO1974 PF03466 LysR substrate binding domain ZMO1975 PF02423 Ornithine cyclodeaminase/mu-crystallin family ZMO1977 PF07690 Major Facilitator Superfamily ZMO1978 PF17762 HTH domain found in ParB protein ZMO1978 PF02195 ParB-like nuclease domain ZMO1979 PF13614 AAA domain ZMO1980 PF02527 rRNA small subunit methyltransferase G ZMO1981 PF01134 Glucose inhibited division protein A ZMO1981 PF13932 GidA associated domain ZMO1983 PF08450 SMP-30/Gluconolactonase/LRE-like region ZMO1984 PF00248 Aldo/keto reductase family ZMO1986 PF00593 TonB dependent receptor ZMO1986 PF07715 TonB-dependent Receptor Plug Domain ZMO1988 PF10396 GTP-binding protein TrmE N-terminus ZMO1988 PF12631 MnmE helical domain ZMO1988 PF01926 50S ribosome-binding GTPase ZMO1989 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ZMO1989 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ZMO1992 PF01738 Dienelactone hydrolase family ZMO1993 PF08240 Alcohol dehydrogenase GroES-like domain ZMO1993 PF00107 Zinc-binding dehydrogenase ZMO1996 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ZMO1996 PF07497 Rho termination factor, RNA-binding domain ZMO1996 PF07498 Rho termination factor, N-terminal domain ZMO1998 PF01208 Uroporphyrinogen decarboxylase (URO-D) ZMO2002 PF00164 Ribosomal protein S12/S23 ZMO2003 PF00338 Ribosomal protein S10p/S20e ZMO2004 PF00203 Ribosomal protein S19 ZMO2005 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter ZMO2006 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ZMO2008 PF00528 Binding-protein-dependent transport system inner membrane component ZMO2023 PF06725 3D domain ZMO2023 PF03562 MltA specific insert domain ZMO2025 PF02472 Biopolymer transport protein ExbD/TolR ZMO2028 PF13237 4Fe-4S dicluster domain ZMO2031 PF01783 Ribosomal L32p protein family ZMO2032 PF04002 RadC-like JAB domain