locus-tag class description IPH67_00005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IPH67_00025 PF04085 rod shape-determining protein MreC IPH67_00065 PF01425 Amidase IPH67_00135 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IPH67_00135 PF01565 FAD binding domain IPH67_00140 PF17773 UPF0176 acylphosphatase like domain IPH67_00140 PF12368 Rhodanase C-terminal IPH67_00140 PF00581 Rhodanese-like domain IPH67_00155 PF01588 Putative tRNA binding domain IPH67_00155 PF09334 tRNA synthetases class I (M) IPH67_00155 PF08264 Anticodon-binding domain of tRNA IPH67_00170 PF00950 ABC 3 transport family IPH67_00175 PF00950 ABC 3 transport family IPH67_00180 PF00005 ABC transporter IPH67_00185 PF01297 Zinc-uptake complex component A periplasmic IPH67_00250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IPH67_00250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPH67_00250 PF02824 TGS domain IPH67_00250 PF03129 Anticodon binding domain IPH67_00255 PF10576 Iron-sulfur binding domain of endonuclease III IPH67_00255 PF00730 HhH-GPD superfamily base excision DNA repair protein IPH67_00255 PF00633 Helix-hairpin-helix motif IPH67_00265 PF04026 SpoVG IPH67_00275 PF01795 MraW methylase family IPH67_00280 PF08245 Mur ligase middle domain IPH67_00280 PF02875 Mur ligase family, glutamate ligase domain IPH67_00280 PF01225 Mur ligase family, catalytic domain IPH67_00285 PF08245 Mur ligase middle domain IPH67_00285 PF02875 Mur ligase family, glutamate ligase domain IPH67_00285 PF01225 Mur ligase family, catalytic domain IPH67_00290 PF08245 Mur ligase middle domain IPH67_00290 PF01225 Mur ligase family, catalytic domain IPH67_00290 PF02875 Mur ligase family, glutamate ligase domain IPH67_00295 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IPH67_00295 PF17854 FtsK alpha domain IPH67_00295 PF09397 Ftsk gamma domain IPH67_00295 PF01580 FtsK/SpoIIIE family IPH67_00320 PF00550 Phosphopantetheine attachment site IPH67_00325 PF00698 Acyl transferase domain IPH67_00330 PF00749 tRNA synthetases class I (E and Q), catalytic domain IPH67_00335 PF00749 tRNA synthetases class I (E and Q), catalytic domain IPH67_00345 PF02504 Fatty acid synthesis protein IPH67_00350 PF02504 Fatty acid synthesis protein IPH67_00355 PF01783 Ribosomal L32p protein family IPH67_00390 PF01245 Ribosomal protein L19 IPH67_00395 PF09936 SAM-dependent RNA methyltransferase IPH67_00395 PF01746 tRNA (Guanine-1)-methyltransferase IPH67_00405 PF00886 Ribosomal protein S16 IPH67_00410 PF00448 SRP54-type protein, GTPase domain IPH67_00410 PF02978 Signal peptide binding domain IPH67_00410 PF02881 SRP54-type protein, helical bundle domain IPH67_00435 PF13167 GTP-binding GTPase N-terminal IPH67_00435 PF01926 50S ribosome-binding GTPase IPH67_00435 PF16360 GTP-binding GTPase Middle Region IPH67_00440 PF00580 UvrD/REP helicase N-terminal domain IPH67_00440 PF13361 UvrD-like helicase C-terminal domain IPH67_00450 PF00579 tRNA synthetases class I (W and Y) IPH67_00490 PF03725 3' exoribonuclease family, domain 2 IPH67_00490 PF01138 3' exoribonuclease family, domain 1 IPH67_00495 PF00575 S1 RNA binding domain IPH67_00495 PF00013 KH domain IPH67_00495 PF03725 3' exoribonuclease family, domain 2 IPH67_00495 PF01138 3' exoribonuclease family, domain 1 IPH67_00495 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IPH67_00500 PF00312 Ribosomal protein S15 IPH67_00510 PF00623 RNA polymerase Rpb1, domain 2 IPH67_00510 PF04983 RNA polymerase Rpb1, domain 3 IPH67_00510 PF04998 RNA polymerase Rpb1, domain 5 IPH67_00510 PF04997 RNA polymerase Rpb1, domain 1 IPH67_00510 PF05000 RNA polymerase Rpb1, domain 4 IPH67_00515 PF00562 RNA polymerase Rpb2, domain 6 IPH67_00515 PF04560 RNA polymerase Rpb2, domain 7 IPH67_00515 PF04563 RNA polymerase beta subunit IPH67_00515 PF10385 RNA polymerase beta subunit external 1 domain IPH67_00515 PF04565 RNA polymerase Rpb2, domain 3 IPH67_00515 PF04561 RNA polymerase Rpb2, domain 2 IPH67_00520 PF00542 Ribosomal protein L7/L12 C-terminal domain IPH67_00520 PF16320 Ribosomal protein L7/L12 dimerisation domain IPH67_00525 PF00466 Ribosomal protein L10 IPH67_00530 PF00687 Ribosomal protein L1p/L10e family IPH67_00535 PF00298 Ribosomal protein L11, RNA binding domain IPH67_00535 PF03946 Ribosomal protein L11, N-terminal domain IPH67_00540 PF00467 KOW motif IPH67_00540 PF02357 Transcription termination factor nusG IPH67_00555 PF00471 Ribosomal protein L33 IPH67_00580 PF01713 Smr domain IPH67_00580 PF00488 MutS domain V IPH67_00590 PF05190 MutS family domain IV IPH67_00590 PF00488 MutS domain V IPH67_00590 PF05188 MutS domain II IPH67_00590 PF05192 MutS domain III IPH67_00590 PF01624 MutS domain I IPH67_00605 PF00231 ATP synthase IPH67_00610 PF00231 ATP synthase IPH67_00615 PF00905 Penicillin binding protein transpeptidase domain IPH67_00615 PF00912 Transglycosylase IPH67_00655 PF03462 PCRF domain IPH67_00655 PF00472 RF-1 domain IPH67_00670 PF00437 Type II/IV secretion system protein IPH67_00670 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IPH67_00685 PF00483 Nucleotidyl transferase IPH67_00685 PF00132 Bacterial transferase hexapeptide (six repeats) IPH67_00695 PF09312 SurA N-terminal domain IPH67_00715 PF03484 tRNA synthetase B5 domain IPH67_00715 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IPH67_00715 PF01588 Putative tRNA binding domain IPH67_00715 PF03147 Ferredoxin-fold anticodon binding domain IPH67_00715 PF03483 B3/4 domain IPH67_00720 PF01588 Putative tRNA binding domain IPH67_00720 PF03147 Ferredoxin-fold anticodon binding domain IPH67_00720 PF03484 tRNA synthetase B5 domain IPH67_00720 PF03483 B3/4 domain IPH67_00720 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IPH67_00725 PF01252 Signal peptidase (SPase) II IPH67_00730 PF00156 Phosphoribosyl transferase domain IPH67_00735 PF00266 Aminotransferase class-V IPH67_00760 PF02405 Permease MlaE IPH67_00765 PF09383 NIL domain IPH67_00765 PF00005 ABC transporter IPH67_00785 PF01432 Peptidase family M3 IPH67_00815 PF01027 Inhibitor of apoptosis-promoting Bax1 IPH67_00830 PF00664 ABC transporter transmembrane region IPH67_00830 PF00005 ABC transporter IPH67_00845 PF00313 'Cold-shock' DNA-binding domain IPH67_00850 PF00271 Helicase conserved C-terminal domain IPH67_00850 PF00270 DEAD/DEAH box helicase IPH67_00860 PF02021 Uncharacterised protein family UPF0102 IPH67_00885 PF00905 Penicillin binding protein transpeptidase domain IPH67_00885 PF03717 Penicillin-binding Protein dimerisation domain IPH67_00925 PF01702 Queuine tRNA-ribosyltransferase IPH67_00930 PF08032 RNA 2'-O ribose methyltransferase substrate binding IPH67_00930 PF00588 SpoU rRNA Methylase family IPH67_00945 PF00588 SpoU rRNA Methylase family IPH67_00945 PF08032 RNA 2'-O ribose methyltransferase substrate binding IPH67_00960 PF00464 Serine hydroxymethyltransferase IPH67_00985 PF00929 Exonuclease IPH67_00995 PF00271 Helicase conserved C-terminal domain IPH67_00995 PF17764 3′ DNA-binding domain (3′BD) IPH67_00995 PF18074 Primosomal protein N C-terminal domain IPH67_00995 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IPH67_00995 PF04851 Type III restriction enzyme, res subunit IPH67_01005 PF18074 Primosomal protein N C-terminal domain IPH67_01005 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IPH67_01005 PF04851 Type III restriction enzyme, res subunit IPH67_01005 PF00271 Helicase conserved C-terminal domain IPH67_01005 PF17764 3′ DNA-binding domain (3′BD) IPH67_01015 PF04199 Putative cyclase IPH67_01020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IPH67_01020 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IPH67_01025 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IPH67_01025 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IPH67_01040 PF02861 Clp amino terminal domain, pathogenicity island component IPH67_01040 PF17871 AAA lid domain IPH67_01040 PF00004 ATPase family associated with various cellular activities (AAA) IPH67_01040 PF10431 C-terminal, D2-small domain, of ClpB protein IPH67_01040 PF07724 AAA domain (Cdc48 subfamily) IPH67_01055 PF08459 UvrC Helix-hairpin-helix N-terminal IPH67_01055 PF01541 GIY-YIG catalytic domain IPH67_01060 PF13932 GidA associated domain IPH67_01060 PF01134 Glucose inhibited division protein A IPH67_01070 PF01029 NusB family IPH67_01075 PF01132 Elongation factor P (EF-P) OB domain IPH67_01075 PF08207 Elongation factor P (EF-P) KOW-like domain IPH67_01075 PF09285 Elongation factor P, C-terminal IPH67_01110 PF13393 Histidyl-tRNA synthetase IPH67_01110 PF03129 Anticodon binding domain IPH67_01120 PF00575 S1 RNA binding domain IPH67_01125 PF00334 Nucleoside diphosphate kinase IPH67_01165 PF01068 ATP dependent DNA ligase domain IPH67_01165 PF13298 DNA polymerase Ligase (LigD) IPH67_01165 PF04679 ATP dependent DNA ligase C terminal region IPH67_01190 PF01406 tRNA synthetases class I (C) catalytic domain IPH67_01190 PF09190 DALR domain IPH67_01205 PF07244 Surface antigen variable number repeat IPH67_01205 PF01103 Surface antigen IPH67_01260 PF00953 Glycosyl transferase family 4 IPH67_01260 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IPH67_01300 PF08275 DNA primase catalytic core, N-terminal domain IPH67_01300 PF01807 CHC2 zinc finger IPH67_01300 PF10410 DnaB-helicase binding domain of primase IPH67_01305 PF04545 Sigma-70, region 4 IPH67_01305 PF04539 Sigma-70 region 3 IPH67_01305 PF00140 Sigma-70 factor, region 1.2 IPH67_01305 PF04546 Sigma-70, non-essential region IPH67_01305 PF03979 Sigma-70 factor, region 1.1 IPH67_01305 PF04542 Sigma-70 region 2 IPH67_01310 PF03471 Transporter associated domain IPH67_01310 PF01595 Cyclin M transmembrane N-terminal domain IPH67_01310 PF00571 CBS domain IPH67_01325 PF02810 SEC-C motif IPH67_01325 PF07516 SecA Wing and Scaffold domain IPH67_01325 PF01043 SecA preprotein cross-linking domain IPH67_01325 PF07517 SecA DEAD-like domain IPH67_01335 PF11987 Translation-initiation factor 2 IPH67_01335 PF00009 Elongation factor Tu GTP binding domain IPH67_01335 PF04760 Translation initiation factor IF-2, N-terminal region IPH67_01340 PF13184 NusA-like KH domain IPH67_01340 PF08529 NusA N-terminal domain IPH67_01345 PF03167 Uracil DNA glycosylase superfamily IPH67_01360 PF00675 Insulinase (Peptidase family M16) IPH67_01360 PF05193 Peptidase M16 inactive domain IPH67_01365 PF00675 Insulinase (Peptidase family M16) IPH67_01365 PF05193 Peptidase M16 inactive domain IPH67_01405 PF00814 Glycoprotease family IPH67_01420 PF01668 SmpB protein IPH67_01455 PF01790 Prolipoprotein diacylglyceryl transferase IPH67_01470 PF13411 MerR HTH family regulatory protein IPH67_01490 PF08676 MutL C terminal dimerisation domain IPH67_01490 PF01119 DNA mismatch repair protein, C-terminal domain IPH67_01510 PF13635 Domain of unknown function (DUF4143) IPH67_01510 PF13173 AAA domain IPH67_01560 PF01261 Xylose isomerase-like TIM barrel IPH67_01570 PF01336 OB-fold nucleic acid binding domain IPH67_01570 PF02938 GAD domain IPH67_01570 PF00152 tRNA synthetases class II (D, K and N) IPH67_01645 PF01636 Phosphotransferase enzyme family IPH67_01660 PF13808 DDE_Tnp_1-associated IPH67_01660 PF01609 Transposase DDE domain IPH67_01675 PF13173 AAA domain IPH67_01675 PF13635 Domain of unknown function (DUF4143) IPH67_01690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IPH67_01690 PF00476 DNA polymerase family A IPH67_01690 PF01612 3'-5' exonuclease IPH67_01690 PF01367 5'-3' exonuclease, C-terminal SAM fold IPH67_01695 PF01016 Ribosomal L27 protein IPH67_01700 PF07549 SecD/SecF GG Motif IPH67_01700 PF02355 Protein export membrane protein IPH67_01705 PF07497 Rho termination factor, RNA-binding domain IPH67_01705 PF07498 Rho termination factor, N-terminal domain IPH67_01705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IPH67_01710 PF02594 Uncharacterised ACR, YggU family COG1872 IPH67_01740 PF00005 ABC transporter IPH67_01765 PF01195 Peptidyl-tRNA hydrolase IPH67_01775 PF00689 Cation transporting ATPase, C-terminus IPH67_01775 PF00690 Cation transporter/ATPase, N-terminus IPH67_01785 PF00588 SpoU rRNA Methylase family IPH67_01790 PF17827 PrmC N-terminal domain IPH67_01790 PF05175 Methyltransferase small domain IPH67_01795 PF00448 SRP54-type protein, GTPase domain IPH67_01795 PF02881 SRP54-type protein, helical bundle domain IPH67_01800 PF00232 Glycosyl hydrolase family 1 IPH67_01820 PF16326 ABC transporter C-terminal domain IPH67_01820 PF00005 ABC transporter IPH67_01820 PF12848 ABC transporter IPH67_01845 PF00535 Glycosyl transferase family 2 IPH67_01850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IPH67_01850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IPH67_01850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IPH67_01875 PF00482 Type II secretion system (T2SS), protein F IPH67_01880 PF07963 Prokaryotic N-terminal methylation motif IPH67_01880 PF14245 Type IV pilin PilA IPH67_01925 PF05188 MutS domain II IPH67_01925 PF05192 MutS domain III IPH67_01925 PF05190 MutS family domain IV IPH67_01925 PF00488 MutS domain V IPH67_01925 PF01624 MutS domain I IPH67_01935 PF00005 ABC transporter IPH67_01940 PF00528 Binding-protein-dependent transport system inner membrane component IPH67_01945 PF00497 Bacterial extracellular solute-binding proteins, family 3 IPH67_01955 PF01084 Ribosomal protein S18 IPH67_01960 PF00679 Elongation factor G C-terminus IPH67_01960 PF00009 Elongation factor Tu GTP binding domain IPH67_01960 PF03144 Elongation factor Tu domain 2 IPH67_01960 PF14492 Elongation Factor G, domain II IPH67_01965 PF01416 tRNA pseudouridine synthase IPH67_01985 PF00133 tRNA synthetases class I (I, L, M and V) IPH67_01985 PF08264 Anticodon-binding domain of tRNA IPH67_01990 PF02130 Uncharacterized protein family UPF0054 IPH67_02025 PF01330 RuvA N terminal domain IPH67_02025 PF07499 RuvA, C-terminal domain IPH67_02040 PF10396 GTP-binding protein TrmE N-terminus IPH67_02040 PF12631 MnmE helical domain IPH67_02040 PF01926 50S ribosome-binding GTPase IPH67_02045 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase IPH67_02045 PF04101 Glycosyltransferase family 28 C-terminal domain IPH67_02055 PF10150 Ribonuclease E/G family IPH67_02055 PF00575 S1 RNA binding domain IPH67_02100 PF08241 Methyltransferase domain IPH67_02125 PF00118 TCP-1/cpn60 chaperonin family IPH67_02130 PF00166 Chaperonin 10 Kd subunit IPH67_02155 PF03448 MgtE intracellular N domain IPH67_02155 PF00571 CBS domain IPH67_02155 PF01769 Divalent cation transporter IPH67_02160 PF00849 RNA pseudouridylate synthase IPH67_02160 PF01479 S4 domain IPH67_02180 PF01797 Transposase IS200 like IPH67_02200 PF00892 EamA-like transporter family IPH67_02215 PF01592 NifU-like N terminal domain IPH67_02220 PF00331 Glycosyl hydrolase family 10 IPH67_02220 PF00756 Putative esterase IPH67_02255 PF00293 NUDIX domain IPH67_02260 PF03023 Lipid II flippase MurJ IPH67_02265 PF00005 ABC transporter IPH67_02270 PF05362 Lon protease (S16) C-terminal proteolytic domain IPH67_02270 PF02190 ATP-dependent protease La (LON) substrate-binding domain IPH67_02270 PF00004 ATPase family associated with various cellular activities (AAA) IPH67_02290 PF13193 AMP-binding enzyme C-terminal domain IPH67_02290 PF00501 AMP-binding enzyme IPH67_02300 PF02223 Thymidylate kinase IPH67_02345 PF00085 Thioredoxin IPH67_02375 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IPH67_02375 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IPH67_02380 PF01255 Putative undecaprenyl diphosphate synthase IPH67_02395 PF03441 FAD binding domain of DNA photolyase IPH67_02395 PF00875 DNA photolyase IPH67_02445 PF02874 ATP synthase alpha/beta family, beta-barrel domain IPH67_02445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IPH67_02465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IPH67_02465 PF01411 tRNA synthetases class II (A) IPH67_02465 PF02272 DHHA1 domain IPH67_02485 PF02491 SHS2 domain inserted in FTSA IPH67_02490 PF00091 Tubulin/FtsZ family, GTPase domain IPH67_02490 PF12327 FtsZ family, C-terminal domain IPH67_02510 PF01177 Asp/Glu/Hydantoin racemase IPH67_02540 PF02934 GatB/GatE catalytic domain IPH67_02540 PF02637 GatB domain IPH67_02570 PF07726 ATPase family associated with various cellular activities (AAA) IPH67_02570 PF17863 AAA lid domain IPH67_02605 PF00113 Enolase, C-terminal TIM barrel domain IPH67_02605 PF03952 Enolase, N-terminal domain IPH67_02610 PF01648 4'-phosphopantetheinyl transferase superfamily IPH67_02620 PF13335 Magnesium chelatase, subunit ChlI C-terminal IPH67_02620 PF01078 Magnesium chelatase, subunit ChlI IPH67_02660 PF00149 Calcineurin-like phosphoesterase IPH67_02665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IPH67_02665 PF02874 ATP synthase alpha/beta family, beta-barrel domain IPH67_02665 PF00306 ATP synthase alpha/beta chain, C terminal domain IPH67_02670 PF00213 ATP synthase delta (OSCP) subunit IPH67_02685 PF00137 ATP synthase subunit C IPH67_02705 PF14490 Helix-hairpin-helix containing domain IPH67_02705 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain IPH67_02705 PF13538 UvrD-like helicase C-terminal domain IPH67_02725 PF00133 tRNA synthetases class I (I, L, M and V) IPH67_02725 PF13603 Leucyl-tRNA synthetase, Domain 2 IPH67_02725 PF09334 tRNA synthetases class I (M) IPH67_02725 PF08264 Anticodon-binding domain of tRNA IPH67_02770 PF03652 Holliday junction resolvase IPH67_02775 PF01235 Sodium:alanine symporter family IPH67_02785 PF01225 Mur ligase family, catalytic domain IPH67_02785 PF02875 Mur ligase family, glutamate ligase domain IPH67_02785 PF08245 Mur ligase middle domain IPH67_02845 PF03030 Inorganic H+ pyrophosphatase IPH67_02880 PF03553 Na+/H+ antiporter family IPH67_02885 PF00572 Ribosomal protein L13 IPH67_02895 PF17820 PDZ domain IPH67_02895 PF02163 Peptidase family M50 IPH67_02900 PF00164 Ribosomal protein S12/S23 IPH67_02905 PF00177 Ribosomal protein S7p/S5e IPH67_02910 PF00679 Elongation factor G C-terminus IPH67_02910 PF03764 Elongation factor G, domain IV IPH67_02910 PF14492 Elongation Factor G, domain II IPH67_02910 PF03144 Elongation factor Tu domain 2 IPH67_02910 PF00009 Elongation factor Tu GTP binding domain IPH67_02915 PF03143 Elongation factor Tu C-terminal domain IPH67_02915 PF00009 Elongation factor Tu GTP binding domain IPH67_02915 PF03144 Elongation factor Tu domain 2 IPH67_02920 PF00338 Ribosomal protein S10p/S20e IPH67_02925 PF00297 Ribosomal protein L3 IPH67_02930 PF00297 Ribosomal protein L3 IPH67_02935 PF00573 Ribosomal protein L4/L1 family IPH67_02940 PF00276 Ribosomal protein L23 IPH67_02945 PF00181 Ribosomal Proteins L2, RNA binding domain IPH67_02945 PF03947 Ribosomal Proteins L2, C-terminal domain IPH67_02950 PF00203 Ribosomal protein S19 IPH67_02955 PF00237 Ribosomal protein L22p/L17e IPH67_02960 PF00189 Ribosomal protein S3, C-terminal domain IPH67_02960 PF07650 KH domain IPH67_02965 PF00252 Ribosomal protein L16p/L10e IPH67_02970 PF00831 Ribosomal L29 protein IPH67_02975 PF00366 Ribosomal protein S17 IPH67_02980 PF00238 Ribosomal protein L14p/L23e IPH67_02985 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IPH67_02985 PF00467 KOW motif IPH67_02990 PF00673 ribosomal L5P family C-terminus IPH67_02990 PF00281 Ribosomal protein L5 IPH67_02995 PF00253 Ribosomal protein S14p/S29e IPH67_03000 PF00410 Ribosomal protein S8 IPH67_03005 PF00347 Ribosomal protein L6 IPH67_03010 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IPH67_03015 PF03719 Ribosomal protein S5, C-terminal domain IPH67_03015 PF00333 Ribosomal protein S5, N-terminal domain IPH67_03020 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IPH67_03025 PF00344 SecY translocase IPH67_03030 PF00557 Metallopeptidase family M24 IPH67_03035 PF01176 Translation initiation factor 1A / IF-1 IPH67_03040 PF00444 Ribosomal protein L36 IPH67_03045 PF00416 Ribosomal protein S13/S18 IPH67_03050 PF00411 Ribosomal protein S11 IPH67_03055 PF01479 S4 domain IPH67_03055 PF00163 Ribosomal protein S4/S9 N-terminal domain IPH67_03060 PF01000 RNA polymerase Rpb3/RpoA insert domain IPH67_03060 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IPH67_03060 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IPH67_03065 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IPH67_03065 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IPH67_03065 PF01000 RNA polymerase Rpb3/RpoA insert domain IPH67_03070 PF01196 Ribosomal protein L17 IPH67_03085 PF00005 ABC transporter IPH67_03095 PF01458 Uncharacterized protein family (UPF0051) IPH67_03145 PF00684 DnaJ central domain IPH67_03145 PF01556 DnaJ C terminal domain IPH67_03145 PF00226 DnaJ domain IPH67_03160 PF07478 D-ala D-ala ligase C-terminus IPH67_03160 PF01820 D-ala D-ala ligase N-terminus IPH67_03170 PF17782 DprA winged helix domain IPH67_03170 PF02481 DNA recombination-mediator protein A IPH67_03195 PF05195 Aminopeptidase P, N-terminal domain IPH67_03195 PF00557 Metallopeptidase family M24 IPH67_03205 PF00633 Helix-hairpin-helix motif IPH67_03205 PF02132 RecR protein IPH67_03205 PF13662 Toprim domain IPH67_03210 PF02096 60Kd inner membrane protein IPH67_03255 PF17862 AAA+ lid domain IPH67_03255 PF01434 Peptidase family M41 IPH67_03255 PF00004 ATPase family associated with various cellular activities (AAA) IPH67_03260 PF01197 Ribosomal protein L31 IPH67_03265 PF00472 RF-1 domain IPH67_03265 PF03462 PCRF domain IPH67_03270 PF02403 Seryl-tRNA synthetase N-terminal domain IPH67_03270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPH67_03275 PF01882 Protein of unknown function DUF58 IPH67_03285 PF06969 HemN C-terminal domain IPH67_03285 PF04055 Radical SAM superfamily IPH67_03305 PF02355 Protein export membrane protein IPH67_03305 PF07549 SecD/SecF GG Motif IPH67_03315 PF01066 CDP-alcohol phosphatidyltransferase IPH67_03320 PF02660 Glycerol-3-phosphate acyltransferase IPH67_03360 PF01380 SIS domain IPH67_03365 PF00380 Ribosomal protein S9/S16 IPH67_03380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IPH67_03390 PF01751 Toprim domain IPH67_03390 PF00986 DNA gyrase B subunit, carboxyl terminus IPH67_03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPH67_03390 PF00204 DNA gyrase B IPH67_03395 PF01751 Toprim domain IPH67_03395 PF00204 DNA gyrase B IPH67_03395 PF00986 DNA gyrase B subunit, carboxyl terminus IPH67_03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPH67_03410 PF11734 TilS substrate C-terminal domain IPH67_03410 PF01171 PP-loop family IPH67_03480 PF00437 Type II/IV secretion system protein IPH67_03495 PF00216 Bacterial DNA-binding protein IPH67_03510 PF00664 ABC transporter transmembrane region IPH67_03510 PF00005 ABC transporter IPH67_03520 PF10502 Signal peptidase, peptidase S26 IPH67_03525 PF01476 LysM domain IPH67_03525 PF01551 Peptidase family M23 IPH67_03595 PF13368 Topoisomerase C-terminal repeat IPH67_03595 PF01396 Topoisomerase DNA binding C4 zinc finger IPH67_03595 PF01131 DNA topoisomerase IPH67_03595 PF01751 Toprim domain IPH67_03630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IPH67_03630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IPH67_03630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IPH67_03630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IPH67_03635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IPH67_03635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IPH67_03635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IPH67_03635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IPH67_03655 PF05525 Branched-chain amino acid transport protein IPH67_03665 PF00210 Ferritin-like domain IPH67_03685 PF13456 Reverse transcriptase-like IPH67_03690 PF08486 Stage II sporulation protein IPH67_03715 PF00216 Bacterial DNA-binding protein IPH67_03725 PF01068 ATP dependent DNA ligase domain IPH67_03725 PF04675 DNA ligase N terminus IPH67_03725 PF04679 ATP dependent DNA ligase C terminal region IPH67_03750 PF02224 Cytidylate kinase IPH67_03755 PF01368 DHH family IPH67_03755 PF02272 DHHA1 domain IPH67_03755 PF17768 RecJ OB domain IPH67_03755 PF10141 Single-strand DNA-specific exonuclease, C terminal domain IPH67_03760 PF01336 OB-fold nucleic acid binding domain IPH67_03760 PF00152 tRNA synthetases class II (D, K and N) IPH67_03765 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IPH67_03765 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IPH67_03775 PF01471 Putative peptidoglycan binding domain IPH67_03775 PF03572 Peptidase family S41 IPH67_03775 PF17820 PDZ domain IPH67_03780 PF03572 Peptidase family S41 IPH67_03780 PF13180 PDZ domain IPH67_03860 PF06421 GTP-binding protein LepA C-terminus IPH67_03860 PF00679 Elongation factor G C-terminus IPH67_03860 PF03144 Elongation factor Tu domain 2 IPH67_03860 PF00009 Elongation factor Tu GTP binding domain IPH67_03880 PF03755 YicC-like family, N-terminal region IPH67_03880 PF08340 Domain of unknown function (DUF1732) IPH67_03920 PF07733 Bacterial DNA polymerase III alpha NTPase domain IPH67_03920 PF02811 PHP domain IPH67_03920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IPH67_03920 PF14579 Helix-hairpin-helix motif IPH67_03925 PF02811 PHP domain IPH67_03925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IPH67_03925 PF14579 Helix-hairpin-helix motif IPH67_03925 PF01336 OB-fold nucleic acid binding domain IPH67_03925 PF07733 Bacterial DNA polymerase III alpha NTPase domain IPH67_03980 PF01409 tRNA synthetases class II core domain (F) IPH67_03980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IPH67_03985 PF00483 Nucleotidyl transferase IPH67_03995 PF00905 Penicillin binding protein transpeptidase domain IPH67_03995 PF03717 Penicillin-binding Protein dimerisation domain IPH67_04005 PF01809 Putative membrane protein insertion efficiency factor IPH67_04015 PF00468 Ribosomal protein L34 IPH67_04120 PF00154 recA bacterial DNA recombination protein IPH67_04125 PF00707 Translation initiation factor IF-3, C-terminal domain IPH67_04125 PF05198 Translation initiation factor IF-3, N-terminal domain IPH67_04130 PF01632 Ribosomal protein L35 IPH67_04135 PF00453 Ribosomal protein L20 IPH67_04150 PF12072 Domain of unknown function (DUF3552) IPH67_04150 PF00013 KH domain IPH67_04150 PF01966 HD domain IPH67_04155 PF13277 YmdB-like protein IPH67_04185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPH67_04185 PF09180 Prolyl-tRNA synthetase, C-terminal IPH67_04185 PF03129 Anticodon binding domain IPH67_04200 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase IPH67_04200 PF00535 Glycosyl transferase family 2 IPH67_04210 PF13358 DDE superfamily endonuclease IPH67_04330 PF02463 RecF/RecN/SMC N terminal domain IPH67_04345 PF02075 Crossover junction endodeoxyribonuclease RuvC IPH67_04350 PF00772 DnaB-like helicase N terminal domain IPH67_04350 PF03796 DnaB-like helicase C terminal domain IPH67_04355 PF00772 DnaB-like helicase N terminal domain IPH67_04355 PF03796 DnaB-like helicase C terminal domain IPH67_04355 PF14528 LAGLIDADG-like domain IPH67_04360 PF00772 DnaB-like helicase N terminal domain IPH67_04360 PF03796 DnaB-like helicase C terminal domain IPH67_04365 PF01281 Ribosomal protein L9, N-terminal domain IPH67_04365 PF03948 Ribosomal protein L9, C-terminal domain IPH67_04405 PF06827 Zinc finger found in FPG and IleRS IPH67_04405 PF08264 Anticodon-binding domain of tRNA IPH67_04405 PF00133 tRNA synthetases class I (I, L, M and V) IPH67_04410 PF00133 tRNA synthetases class I (I, L, M and V) IPH67_04410 PF06827 Zinc finger found in FPG and IleRS IPH67_04410 PF08264 Anticodon-binding domain of tRNA IPH67_04420 PF02875 Mur ligase family, glutamate ligase domain IPH67_04420 PF08245 Mur ligase middle domain IPH67_04425 PF01098 Cell cycle protein IPH67_04440 PF02511 Thymidylate synthase complementing protein IPH67_04460 PF01649 Ribosomal protein S20 IPH67_04465 PF00830 Ribosomal L28 family IPH67_04470 PF06480 FtsH Extracellular IPH67_04470 PF00004 ATPase family associated with various cellular activities (AAA) IPH67_04470 PF01434 Peptidase family M41 IPH67_04470 PF17862 AAA+ lid domain IPH67_04490 PF01618 MotA/TolQ/ExbB proton channel family IPH67_04515 PF01966 HD domain IPH67_04515 PF12627 Probable RNA and SrmB- binding site of polymerase A IPH67_04515 PF01743 Poly A polymerase head domain IPH67_04530 PF00521 DNA gyrase/topoisomerase IV, subunit A IPH67_04530 PF03989 DNA gyrase C-terminal domain, beta-propeller IPH67_04550 PF00534 Glycosyl transferases group 1 IPH67_04555 PF16363 GDP-mannose 4,6 dehydratase IPH67_04565 PF00534 Glycosyl transferases group 1 IPH67_04585 PF18073 Rubredoxin metal binding domain IPH67_04590 PF00849 RNA pseudouridylate synthase IPH67_04590 PF01479 S4 domain IPH67_04625 PF08245 Mur ligase middle domain IPH67_04625 PF02875 Mur ligase family, glutamate ligase domain IPH67_04625 PF01225 Mur ligase family, catalytic domain IPH67_04650 PF00883 Cytosol aminopeptidase family, catalytic domain IPH67_04650 PF02789 Cytosol aminopeptidase family, N-terminal domain IPH67_04665 PF01434 Peptidase family M41 IPH67_04665 PF06480 FtsH Extracellular IPH67_04665 PF17862 AAA+ lid domain IPH67_04665 PF00004 ATPase family associated with various cellular activities (AAA) IPH67_04690 PF02687 FtsX-like permease family IPH67_04705 PF11638 DnaA N-terminal domain IPH67_04705 PF08299 Bacterial dnaA protein helix-turn-helix IPH67_04705 PF00308 Bacterial dnaA protein IPH67_04710 PF01520 N-acetylmuramoyl-L-alanine amidase IPH67_04765 PF01797 Transposase IS200 like IPH67_04795 PF01479 S4 domain IPH67_04795 PF01728 FtsJ-like methyltransferase IPH67_04810 PF13180 PDZ domain IPH67_04815 PF03129 Anticodon binding domain IPH67_04815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPH67_04820 PF02386 Cation transport protein IPH67_04825 PF02254 TrkA-N domain IPH67_04825 PF02080 TrkA-C domain IPH67_04835 PF00398 Ribosomal RNA adenine dimethylase IPH67_04855 PF00889 Elongation factor TS IPH67_04860 PF01765 Ribosome recycling factor IPH67_04880 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPH67_04920 PF00829 Ribosomal prokaryotic L21 protein IPH67_04925 PF05188 MutS domain II IPH67_04925 PF05192 MutS domain III IPH67_04925 PF05190 MutS family domain IV IPH67_04925 PF00488 MutS domain V IPH67_04925 PF01624 MutS domain I IPH67_04935 PF17760 UvrA interaction domain IPH67_04935 PF00005 ABC transporter IPH67_04935 PF17755 UvrA DNA-binding domain IPH67_04960 PF01098 Cell cycle protein IPH67_04965 PF05496 Holliday junction DNA helicase RuvB P-loop domain IPH67_04965 PF17864 RuvB AAA lid domain IPH67_04965 PF05491 RuvB C-terminal winged helix domain IPH67_04975 PF02562 PhoH-like protein IPH67_04975 PF13638 PIN domain IPH67_05010 PF01926 50S ribosome-binding GTPase IPH67_05010 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IPH67_05015 PF12170 DNA polymerase III tau subunit V interacting with alpha IPH67_05015 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IPH67_05015 PF12169 DNA polymerase III subunits gamma and tau domain III IPH67_05035 PF00318 Ribosomal protein S2 IPH67_05045 PF03219 TLC ATP/ADP transporter IPH67_05050 PF02190 ATP-dependent protease La (LON) substrate-binding domain IPH67_05050 PF00004 ATPase family associated with various cellular activities (AAA) IPH67_05050 PF05362 Lon protease (S16) C-terminal proteolytic domain IPH67_05070 PF01025 GrpE IPH67_05110 PF00436 Single-strand binding protein family IPH67_05140 PF01066 CDP-alcohol phosphatidyltransferase IPH67_05150 PF05746 DALR anticodon binding domain IPH67_05150 PF03485 Arginyl tRNA synthetase N terminal domain IPH67_05150 PF00750 tRNA synthetases class I (R) IPH67_05155 PF03485 Arginyl tRNA synthetase N terminal domain IPH67_05155 PF05746 DALR anticodon binding domain IPH67_05155 PF00750 tRNA synthetases class I (R) IPH67_05165 PF00005 ABC transporter IPH67_05235 PF02545 Maf-like protein IPH67_05255 PF00749 tRNA synthetases class I (E and Q), catalytic domain IPH67_05270 PF08402 TOBE domain IPH67_05270 PF00005 ABC transporter IPH67_05275 PF00528 Binding-protein-dependent transport system inner membrane component IPH67_05280 PF00528 Binding-protein-dependent transport system inner membrane component IPH67_05285 PF13416 Bacterial extracellular solute-binding protein IPH67_05385 PF01165 Ribosomal protein S21 IPH67_05400 PF01478 Type IV leader peptidase family IPH67_05400 PF06750 Bacterial Peptidase A24 N-terminal domain IPH67_05415 PF14245 Type IV pilin PilA IPH67_05415 PF07963 Prokaryotic N-terminal methylation motif IPH67_05445 PF04101 Glycosyltransferase family 28 C-terminal domain IPH67_05445 PF03033 Glycosyltransferase family 28 N-terminal domain IPH67_05470 PF07075 Protein of unknown function (DUF1343) IPH67_05495 PF00342 Phosphoglucose isomerase IPH67_05555 PF00119 ATP synthase A chain IPH67_05560 PF00137 ATP synthase subunit C IPH67_05565 PF00571 CBS domain IPH67_05565 PF00291 Pyridoxal-phosphate dependent enzyme IPH67_05580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IPH67_05595 PF04085 rod shape-determining protein MreC IPH67_05630 PF01425 Amidase IPH67_05635 PF01425 Amidase IPH67_05640 PF01425 Amidase IPH67_05645 PF02686 Glu-tRNAGln amidotransferase C subunit IPH67_05675 PF02527 rRNA small subunit methyltransferase G