locus-tag class description IPM44_00060 PF00011 Hsp20/alpha crystallin family IPM44_00065 PF00156 Phosphoribosyl transferase domain IPM44_00075 PF00551 Formyl transferase IPM44_00120 PF01741 Large-conductance mechanosensitive channel, MscL IPM44_00130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IPM44_00130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IPM44_00135 PF03819 MazG nucleotide pyrophosphohydrolase domain IPM44_00150 PF10458 Valyl tRNA synthetase tRNA binding arm IPM44_00150 PF00133 tRNA synthetases class I (I, L, M and V) IPM44_00150 PF08264 Anticodon-binding domain of tRNA IPM44_00155 PF00293 NUDIX domain IPM44_00160 PF00814 Glycoprotease family IPM44_00185 PF02388 FemAB family IPM44_00190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IPM44_00190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IPM44_00190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IPM44_00190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IPM44_00215 PF00166 Chaperonin 10 Kd subunit IPM44_00220 PF00118 TCP-1/cpn60 chaperonin family IPM44_00255 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain IPM44_00255 PF01380 SIS domain IPM44_00315 PF03009 Glycerophosphoryl diester phosphodiesterase family IPM44_00340 PF12002 MgsA AAA+ ATPase C terminal IPM44_00340 PF16193 AAA C-terminal domain IPM44_00340 PF00004 ATPase family associated with various cellular activities (AAA) IPM44_00350 PF03816 Cell envelope-related transcriptional attenuator domain IPM44_00355 PF00625 Guanylate kinase IPM44_00375 PF02875 Mur ligase family, glutamate ligase domain IPM44_00375 PF08245 Mur ligase middle domain IPM44_00375 PF01225 Mur ligase family, catalytic domain IPM44_00380 PF00491 Arginase family IPM44_00405 PF01807 CHC2 zinc finger IPM44_00405 PF10410 DnaB-helicase binding domain of primase IPM44_00405 PF08278 DNA primase DnaG DnaB-binding IPM44_00405 PF13662 Toprim domain IPM44_00405 PF08275 DNA primase catalytic core, N-terminal domain IPM44_00410 PF04542 Sigma-70 region 2 IPM44_00410 PF00140 Sigma-70 factor, region 1.2 IPM44_00410 PF03979 Sigma-70 factor, region 1.1 IPM44_00410 PF04539 Sigma-70 region 3 IPM44_00410 PF04545 Sigma-70, region 4 IPM44_00420 PF01367 5'-3' exonuclease, C-terminal SAM fold IPM44_00420 PF01612 3'-5' exonuclease IPM44_00420 PF00476 DNA polymerase family A IPM44_00420 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IPM44_00430 PF06827 Zinc finger found in FPG and IleRS IPM44_00430 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IPM44_00430 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IPM44_00440 PF01649 Ribosomal protein S20 IPM44_00445 PF01368 DHH family IPM44_00445 PF02272 DHHA1 domain IPM44_00450 PF01509 TruB family pseudouridylate synthase (N terminal domain) IPM44_00450 PF16198 tRNA pseudouridylate synthase B C-terminal domain IPM44_00455 PF00312 Ribosomal protein S15 IPM44_00460 PF00575 S1 RNA binding domain IPM44_00460 PF03725 3' exoribonuclease family, domain 2 IPM44_00460 PF00013 KH domain IPM44_00460 PF01138 3' exoribonuclease family, domain 1 IPM44_00460 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IPM44_00465 PF03167 Uracil DNA glycosylase superfamily IPM44_00470 PF17770 Ribonuclease J C-terminal domain IPM44_00470 PF00753 Metallo-beta-lactamase superfamily IPM44_00470 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IPM44_00475 PF00535 Glycosyl transferase family 2 IPM44_00480 PF00005 ABC transporter IPM44_00480 PF00664 ABC transporter transmembrane region IPM44_00485 PF01580 FtsK/SpoIIIE family IPM44_00485 PF09397 Ftsk gamma domain IPM44_00485 PF17854 FtsK alpha domain IPM44_00485 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IPM44_00490 PF00082 Subtilase family IPM44_00490 PF05922 Peptidase inhibitor I9 IPM44_00495 PF04461 Protein of unknown function (DUF520) IPM44_00500 PF00154 recA bacterial DNA recombination protein IPM44_00505 PF02631 RecX family IPM44_00515 PF01250 Ribosomal protein S6 IPM44_00520 PF00436 Single-strand binding protein family IPM44_00525 PF01084 Ribosomal protein S18 IPM44_00530 PF01132 Elongation factor P (EF-P) OB domain IPM44_00530 PF08207 Elongation factor P (EF-P) KOW-like domain IPM44_00530 PF09285 Elongation factor P, C-terminal IPM44_00535 PF01926 50S ribosome-binding GTPase IPM44_00535 PF06071 Protein of unknown function (DUF933) IPM44_00555 PF11104 Type IV pilus assembly protein PilM; IPM44_00575 PF00437 Type II/IV secretion system protein IPM44_00575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IPM44_00580 PF00437 Type II/IV secretion system protein IPM44_00585 PF00482 Type II secretion system (T2SS), protein F IPM44_00595 PF06750 Bacterial Peptidase A24 N-terminal domain IPM44_00595 PF01478 Type IV leader peptidase family IPM44_00620 PF02899 Phage integrase, N-terminal SAM-like domain IPM44_00620 PF00589 Phage integrase family IPM44_00635 PF00675 Insulinase (Peptidase family M16) IPM44_00635 PF05193 Peptidase M16 inactive domain IPM44_00640 PF00334 Nucleoside diphosphate kinase IPM44_00715 PF00953 Glycosyl transferase family 4 IPM44_00725 PF14693 Ribosomal protein TL5, C-terminal domain IPM44_00725 PF01386 Ribosomal L25p family IPM44_00730 PF03477 ATP cone domain IPM44_00740 PF00005 ABC transporter IPM44_00745 PF02687 FtsX-like permease family IPM44_00745 PF00005 ABC transporter IPM44_00745 PF12704 MacB-like periplasmic core domain IPM44_00755 PF02824 TGS domain IPM44_00755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IPM44_00755 PF03129 Anticodon binding domain IPM44_00755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPM44_00765 PF08353 Domain of unknown function (DUF1727) IPM44_00765 PF08245 Mur ligase middle domain IPM44_00770 PF07685 CobB/CobQ-like glutamine amidotransferase domain IPM44_00780 PF01594 AI-2E family transporter IPM44_00790 PF00830 Ribosomal L28 family IPM44_00795 PF02163 Peptidase family M50 IPM44_00815 PF02673 Bacitracin resistance protein BacA IPM44_00820 PF00300 Histidine phosphatase superfamily (branch 1) IPM44_00820 PF13456 Reverse transcriptase-like IPM44_00830 PF02397 Bacterial sugar transferase IPM44_00835 PF13439 Glycosyltransferase Family 4 IPM44_00835 PF00534 Glycosyl transferases group 1 IPM44_00845 PF00453 Ribosomal protein L20 IPM44_00850 PF01632 Ribosomal protein L35 IPM44_00855 PF00707 Translation initiation factor IF-3, C-terminal domain IPM44_00855 PF05198 Translation initiation factor IF-3, N-terminal domain IPM44_00880 PF01078 Magnesium chelatase, subunit ChlI IPM44_00880 PF13335 Magnesium chelatase, subunit ChlI C-terminal IPM44_00890 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase IPM44_00890 PF00534 Glycosyl transferases group 1 IPM44_00895 PF00534 Glycosyl transferases group 1 IPM44_00895 PF13439 Glycosyltransferase Family 4 IPM44_00900 PF00534 Glycosyl transferases group 1 IPM44_00900 PF13439 Glycosyltransferase Family 4 IPM44_00915 PF00082 Subtilase family IPM44_00925 PF00005 ABC transporter IPM44_00930 PF00005 ABC transporter IPM44_00930 PF02687 FtsX-like permease family IPM44_00930 PF12704 MacB-like periplasmic core domain IPM44_00935 PF00274 Fructose-bisphosphate aldolase class-I IPM44_00940 PF01668 SmpB protein IPM44_00945 PF00750 tRNA synthetases class I (R) IPM44_00945 PF05746 DALR anticodon binding domain IPM44_00945 PF03485 Arginyl tRNA synthetase N terminal domain IPM44_00950 PF00580 UvrD/REP helicase N-terminal domain IPM44_00950 PF13361 UvrD-like helicase C-terminal domain IPM44_00965 PF00579 tRNA synthetases class I (W and Y) IPM44_00975 PF01409 tRNA synthetases class II core domain (F) IPM44_00975 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IPM44_00980 PF01588 Putative tRNA binding domain IPM44_00980 PF03147 Ferredoxin-fold anticodon binding domain IPM44_00980 PF03484 tRNA synthetase B5 domain IPM44_00980 PF03483 B3/4 domain IPM44_00980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IPM44_01010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM44_01010 PF00986 DNA gyrase B subunit, carboxyl terminus IPM44_01010 PF00204 DNA gyrase B IPM44_01010 PF01751 Toprim domain IPM44_01015 PF03989 DNA gyrase C-terminal domain, beta-propeller IPM44_01015 PF00521 DNA gyrase/topoisomerase IV, subunit A IPM44_01025 PF02681 Divergent PAP2 family IPM44_01065 PF00111 2Fe-2S iron-sulfur cluster binding domain IPM44_01065 PF00355 Rieske [2Fe-2S] domain IPM44_01070 PF01738 Dienelactone hydrolase family IPM44_01075 PF01255 Putative undecaprenyl diphosphate synthase IPM44_01080 PF02011 Glycosyl hydrolase family 48 IPM44_01080 PF00041 Fibronectin type III domain IPM44_01080 PF00553 Cellulose binding domain IPM44_01100 PF03423 Carbohydrate binding domain (family 25) IPM44_01100 PF00041 Fibronectin type III domain IPM44_01100 PF03065 Glycosyl hydrolase family 57 IPM44_01125 PF00480 ROK family IPM44_01135 PF00575 S1 RNA binding domain IPM44_01145 PF00009 Elongation factor Tu GTP binding domain IPM44_01145 PF11987 Translation-initiation factor 2 IPM44_01145 PF04760 Translation initiation factor IF-2, N-terminal region IPM44_01150 PF02033 Ribosome-binding factor A IPM44_01155 PF08279 HTH domain IPM44_01155 PF00072 Response regulator receiver domain IPM44_01160 PF00551 Formyl transferase IPM44_01160 PF02911 Formyl transferase, C-terminal domain IPM44_01165 PF01327 Polypeptide deformylase IPM44_01170 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IPM44_01170 PF04851 Type III restriction enzyme, res subunit IPM44_01170 PF18074 Primosomal protein N C-terminal domain IPM44_01170 PF17764 3′ DNA-binding domain (3′BD) IPM44_01170 PF00271 Helicase conserved C-terminal domain IPM44_01175 PF07549 SecD/SecF GG Motif IPM44_01175 PF02355 Protein export membrane protein IPM44_01180 PF02355 Protein export membrane protein IPM44_01180 PF07549 SecD/SecF GG Motif IPM44_01200 PF10141 Single-strand DNA-specific exonuclease, C terminal domain IPM44_01200 PF01368 DHH family IPM44_01200 PF17768 RecJ OB domain IPM44_01200 PF02272 DHHA1 domain IPM44_01205 PF02824 TGS domain IPM44_01205 PF13291 ACT domain IPM44_01205 PF04607 Region found in RelA / SpoT proteins IPM44_01210 PF01165 Ribosomal protein S21 IPM44_01215 PF09424 Yqey-like protein IPM44_01220 PF02130 Uncharacterized protein family UPF0054 IPM44_01225 PF01219 Prokaryotic diacylglycerol kinase IPM44_01235 PF00557 Metallopeptidase family M24 IPM44_01240 PF02491 SHS2 domain inserted in FTSA IPM44_01245 PF00091 Tubulin/FtsZ family, GTPase domain IPM44_01245 PF12327 FtsZ family, C-terminal domain IPM44_01250 PF03477 ATP cone domain IPM44_01260 PF00133 tRNA synthetases class I (I, L, M and V) IPM44_01260 PF08264 Anticodon-binding domain of tRNA IPM44_01265 PF01098 Cell cycle protein IPM44_01270 PF00565 Staphylococcal nuclease homologue IPM44_01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM44_01280 PF00990 Diguanylate cyclase, GGDEF domain IPM44_01295 PF00829 Ribosomal prokaryotic L21 protein IPM44_01300 PF13614 AAA domain IPM44_01305 PF17762 HTH domain found in ParB protein IPM44_01305 PF02195 ParB-like nuclease domain IPM44_01310 PF10502 Signal peptidase, peptidase S26 IPM44_01325 PF13180 PDZ domain IPM44_01340 PF05175 Methyltransferase small domain IPM44_01340 PF17827 PrmC N-terminal domain IPM44_01345 PF00472 RF-1 domain IPM44_01345 PF03462 PCRF domain IPM44_01350 PF01197 Ribosomal protein L31 IPM44_01365 PF06737 Transglycosylase-like domain IPM44_01365 PF01476 LysM domain IPM44_01370 PF00318 Ribosomal protein S2 IPM44_01375 PF00889 Elongation factor TS IPM44_01380 PF01765 Ribosome recycling factor IPM44_01405 PF02163 Peptidase family M50 IPM44_01405 PF13180 PDZ domain IPM44_01410 PF02517 CPBP intramembrane metalloprotease IPM44_01430 PF00905 Penicillin binding protein transpeptidase domain IPM44_01430 PF03717 Penicillin-binding Protein dimerisation domain IPM44_01435 PF03449 Transcription elongation factor, N-terminal IPM44_01435 PF01272 Transcription elongation factor, GreA/GreB, C-term IPM44_01440 PF01921 tRNA synthetases class I (K) IPM44_01445 PF02403 Seryl-tRNA synthetase N-terminal domain IPM44_01445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPM44_01455 PF02810 SEC-C motif IPM44_01455 PF07516 SecA Wing and Scaffold domain IPM44_01455 PF01043 SecA preprotein cross-linking domain IPM44_01455 PF07517 SecA DEAD-like domain IPM44_01490 PF03462 PCRF domain IPM44_01490 PF00472 RF-1 domain IPM44_01495 PF00005 ABC transporter IPM44_01495 PF00664 ABC transporter transmembrane region IPM44_01500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IPM44_01505 PF00005 ABC transporter IPM44_01510 PF02687 FtsX-like permease family IPM44_01510 PF18075 FtsX extracellular domain IPM44_01535 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase IPM44_01550 PF01471 Putative peptidoglycan binding domain IPM44_01550 PF17820 PDZ domain IPM44_01550 PF03572 Peptidase family S41 IPM44_01555 PF00117 Glutamine amidotransferase class-I IPM44_01555 PF06418 CTP synthase N-terminus IPM44_01560 PF00072 Response regulator receiver domain IPM44_01560 PF00486 Transcriptional regulatory protein, C terminal IPM44_01565 PF01016 Ribosomal L27 protein IPM44_01580 PF02601 Exonuclease VII, large subunit IPM44_01580 PF13742 OB-fold nucleic acid binding domain IPM44_01630 PF13439 Glycosyltransferase Family 4 IPM44_01630 PF00534 Glycosyl transferases group 1 IPM44_01635 PF03808 Glycosyl transferase WecB/TagA/CpsF family IPM44_01655 PF12697 Alpha/beta hydrolase family IPM44_01665 PF03641 Possible lysine decarboxylase IPM44_01675 PF01040 UbiA prenyltransferase family IPM44_01680 PF00348 Polyprenyl synthetase IPM44_01690 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IPM44_01695 PF02357 Transcription termination factor nusG IPM44_01695 PF00467 KOW motif IPM44_01700 PF03946 Ribosomal protein L11, N-terminal domain IPM44_01700 PF00298 Ribosomal protein L11, RNA binding domain IPM44_01705 PF00687 Ribosomal protein L1p/L10e family IPM44_01710 PF00294 pfkB family carbohydrate kinase IPM44_01710 PF01467 Cytidylyltransferase-like IPM44_01720 PF00186 Dihydrofolate reductase IPM44_01725 PF00303 Thymidylate synthase IPM44_01740 PF00466 Ribosomal protein L10 IPM44_01745 PF16320 Ribosomal protein L7/L12 dimerisation domain IPM44_01745 PF00542 Ribosomal protein L7/L12 C-terminal domain IPM44_01755 PF12169 DNA polymerase III subunits gamma and tau domain III IPM44_01760 PF00772 DnaB-like helicase N terminal domain IPM44_01760 PF03796 DnaB-like helicase C terminal domain IPM44_01790 PF13662 Toprim domain IPM44_01790 PF02132 RecR protein IPM44_01800 PF01406 tRNA synthetases class I (C) catalytic domain IPM44_01800 PF09190 DALR domain IPM44_01850 PF05257 CHAP domain IPM44_01880 PF00176 SNF2 family N-terminal domain IPM44_01880 PF00271 Helicase conserved C-terminal domain IPM44_01900 PF16326 ABC transporter C-terminal domain IPM44_01900 PF00005 ABC transporter IPM44_01900 PF12848 ABC transporter IPM44_01940 PF18415 Histidine kinase receptor ArcB trans-membrane domain IPM44_01940 PF01627 Hpt domain IPM44_01940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM44_01940 PF00989 PAS fold IPM44_01940 PF00072 Response regulator receiver domain IPM44_01940 PF00512 His Kinase A (phospho-acceptor) domain IPM44_01955 PF00781 Diacylglycerol kinase catalytic domain IPM44_01965 PF18415 Histidine kinase receptor ArcB trans-membrane domain IPM44_01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM44_01965 PF00072 Response regulator receiver domain IPM44_01965 PF00989 PAS fold IPM44_01965 PF01627 Hpt domain IPM44_01965 PF00512 His Kinase A (phospho-acceptor) domain IPM44_01995 PF07885 Ion channel IPM44_01995 PF02254 TrkA-N domain IPM44_02010 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IPM44_02010 PF01580 FtsK/SpoIIIE family IPM44_02010 PF09397 Ftsk gamma domain IPM44_02010 PF17854 FtsK alpha domain IPM44_02020 PF01541 GIY-YIG catalytic domain IPM44_02025 PF00581 Rhodanese-like domain IPM44_02035 PF00561 alpha/beta hydrolase fold IPM44_02040 PF00005 ABC transporter IPM44_02045 PF00005 ABC transporter IPM44_02045 PF12704 MacB-like periplasmic core domain IPM44_02045 PF02687 FtsX-like permease family IPM44_02050 PF00270 DEAD/DEAH box helicase IPM44_02050 PF00271 Helicase conserved C-terminal domain IPM44_02060 PF09335 SNARE associated Golgi protein IPM44_02070 PF00300 Histidine phosphatase superfamily (branch 1) IPM44_02080 PF00578 AhpC/TSA family IPM44_02085 PF00749 tRNA synthetases class I (E and Q), catalytic domain IPM44_02105 PF00535 Glycosyl transferase family 2 IPM44_02115 PF01341 Glycosyl hydrolases family 6 IPM44_02115 PF00553 Cellulose binding domain IPM44_02125 PF17479 Protein of unknown function (DUF3048) C-terminal domain IPM44_02125 PF11258 Protein of unknown function (DUF3048) N-terminal domain IPM44_02130 PF00268 Ribonucleotide reductase, small chain IPM44_02135 PF03477 ATP cone domain IPM44_02135 PF02867 Ribonucleotide reductase, barrel domain IPM44_02135 PF00317 Ribonucleotide reductase, all-alpha domain IPM44_02200 PF17773 UPF0176 acylphosphatase like domain IPM44_02200 PF12368 Rhodanase C-terminal IPM44_02200 PF00581 Rhodanese-like domain IPM44_02210 PF00664 ABC transporter transmembrane region IPM44_02210 PF00005 ABC transporter IPM44_02220 PF01702 Queuine tRNA-ribosyltransferase IPM44_02225 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain IPM44_02225 PF00293 NUDIX domain IPM44_02225 PF09297 NADH pyrophosphatase zinc ribbon domain IPM44_02230 PF02492 CobW/HypB/UreG, nucleotide-binding domain IPM44_02230 PF07683 Cobalamin synthesis protein cobW C-terminal domain IPM44_02235 PF13426 PAS domain IPM44_02235 PF00512 His Kinase A (phospho-acceptor) domain IPM44_02235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM44_02235 PF00672 HAMP domain IPM44_02240 PF00486 Transcriptional regulatory protein, C terminal IPM44_02240 PF00072 Response regulator receiver domain IPM44_02245 PF00152 tRNA synthetases class II (D, K and N) IPM44_02245 PF01336 OB-fold nucleic acid binding domain IPM44_02250 PF02616 Segregation and condensation protein ScpA IPM44_02255 PF04079 Segregation and condensation complex subunit ScpB IPM44_02260 PF01479 S4 domain IPM44_02260 PF00849 RNA pseudouridylate synthase IPM44_02265 PF07943 Penicillin-binding protein 5, C-terminal domain IPM44_02265 PF00768 D-alanyl-D-alanine carboxypeptidase IPM44_02270 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IPM44_02270 PF01926 50S ribosome-binding GTPase IPM44_02275 PF01195 Peptidyl-tRNA hydrolase IPM44_02280 PF17782 DprA winged helix domain IPM44_02280 PF02481 DNA recombination-mediator protein A IPM44_02285 PF01751 Toprim domain IPM44_02285 PF01396 Topoisomerase DNA binding C4 zinc finger IPM44_02285 PF01131 DNA topoisomerase IPM44_02290 PF04545 Sigma-70, region 4 IPM44_02290 PF00140 Sigma-70 factor, region 1.2 IPM44_02290 PF04542 Sigma-70 region 2 IPM44_02290 PF04539 Sigma-70 region 3 IPM44_02305 PF04101 Glycosyltransferase family 28 C-terminal domain IPM44_02305 PF03033 Glycosyltransferase family 28 N-terminal domain IPM44_02310 PF01098 Cell cycle protein IPM44_02315 PF00953 Glycosyl transferase family 4 IPM44_02320 PF00905 Penicillin binding protein transpeptidase domain IPM44_02320 PF03793 PASTA domain IPM44_02320 PF03717 Penicillin-binding Protein dimerisation domain IPM44_02330 PF01795 MraW methylase family IPM44_02335 PF02381 MraZ protein, putative antitoxin-like IPM44_02345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPM44_02345 PF03129 Anticodon binding domain IPM44_02355 PF00072 Response regulator receiver domain IPM44_02355 PF00486 Transcriptional regulatory protein, C terminal IPM44_02370 PF00578 AhpC/TSA family IPM44_02375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IPM44_02375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IPM44_02385 PF07883 Cupin domain IPM44_02415 PF02583 Metal-sensitive transcriptional repressor IPM44_02435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM44_02435 PF00512 His Kinase A (phospho-acceptor) domain IPM44_02435 PF01627 Hpt domain IPM44_02435 PF00072 Response regulator receiver domain IPM44_02435 PF00672 HAMP domain IPM44_02435 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IPM44_02470 PF09115 DNA polymerase III, delta subunit, C terminal IPM44_02475 PF00849 RNA pseudouridylate synthase IPM44_02475 PF01479 S4 domain IPM44_02485 PF00380 Ribosomal protein S9/S16 IPM44_02490 PF00572 Ribosomal protein L13 IPM44_02495 PF01196 Ribosomal protein L17 IPM44_02500 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IPM44_02500 PF01000 RNA polymerase Rpb3/RpoA insert domain IPM44_02500 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IPM44_02505 PF01479 S4 domain IPM44_02505 PF00163 Ribosomal protein S4/S9 N-terminal domain IPM44_02510 PF00411 Ribosomal protein S11 IPM44_02515 PF00416 Ribosomal protein S13/S18 IPM44_02520 PF00444 Ribosomal protein L36 IPM44_02525 PF01176 Translation initiation factor 1A / IF-1 IPM44_02530 PF00344 SecY translocase IPM44_02535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IPM44_02540 PF03719 Ribosomal protein S5, C-terminal domain IPM44_02540 PF00333 Ribosomal protein S5, N-terminal domain IPM44_02545 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IPM44_02550 PF00347 Ribosomal protein L6 IPM44_02555 PF00410 Ribosomal protein S8 IPM44_02560 PF00253 Ribosomal protein S14p/S29e IPM44_02565 PF00281 Ribosomal protein L5 IPM44_02565 PF00673 ribosomal L5P family C-terminus IPM44_02570 PF00467 KOW motif IPM44_02570 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IPM44_02575 PF00238 Ribosomal protein L14p/L23e IPM44_02580 PF00366 Ribosomal protein S17 IPM44_02585 PF00831 Ribosomal L29 protein IPM44_02590 PF00252 Ribosomal protein L16p/L10e IPM44_02595 PF07650 KH domain IPM44_02595 PF00189 Ribosomal protein S3, C-terminal domain IPM44_02600 PF00237 Ribosomal protein L22p/L17e IPM44_02605 PF00203 Ribosomal protein S19 IPM44_02610 PF03947 Ribosomal Proteins L2, C-terminal domain IPM44_02610 PF00181 Ribosomal Proteins L2, RNA binding domain IPM44_02615 PF00276 Ribosomal protein L23 IPM44_02620 PF00573 Ribosomal protein L4/L1 family IPM44_02625 PF00297 Ribosomal protein L3 IPM44_02635 PF00338 Ribosomal protein S10p/S20e IPM44_02640 PF03143 Elongation factor Tu C-terminal domain IPM44_02640 PF00009 Elongation factor Tu GTP binding domain IPM44_02640 PF03144 Elongation factor Tu domain 2 IPM44_02650 PF00679 Elongation factor G C-terminus IPM44_02650 PF14492 Elongation Factor G, domain II IPM44_02650 PF03764 Elongation factor G, domain IV IPM44_02650 PF00009 Elongation factor Tu GTP binding domain IPM44_02650 PF03144 Elongation factor Tu domain 2 IPM44_02655 PF12848 ABC transporter IPM44_02655 PF16326 ABC transporter C-terminal domain IPM44_02655 PF00005 ABC transporter IPM44_02680 PF00177 Ribosomal protein S7p/S5e IPM44_02685 PF00164 Ribosomal protein S12/S23 IPM44_02690 PF04998 RNA polymerase Rpb1, domain 5 IPM44_02690 PF04983 RNA polymerase Rpb1, domain 3 IPM44_02690 PF00623 RNA polymerase Rpb1, domain 2 IPM44_02690 PF04997 RNA polymerase Rpb1, domain 1 IPM44_02690 PF05000 RNA polymerase Rpb1, domain 4 IPM44_02695 PF04565 RNA polymerase Rpb2, domain 3 IPM44_02695 PF04563 RNA polymerase beta subunit IPM44_02695 PF10385 RNA polymerase beta subunit external 1 domain IPM44_02695 PF04561 RNA polymerase Rpb2, domain 2 IPM44_02695 PF00562 RNA polymerase Rpb2, domain 6 IPM44_02695 PF04560 RNA polymerase Rpb2, domain 7 IPM44_02705 PF00574 Clp protease IPM44_02710 PF05697 Bacterial trigger factor protein (TF) IPM44_02710 PF05698 Bacterial trigger factor protein (TF) C-terminus IPM44_02710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IPM44_02720 PF17676 LD-carboxypeptidase C-terminal domain IPM44_02720 PF02016 LD-carboxypeptidase N-terminal domain IPM44_02740 PF00270 DEAD/DEAH box helicase IPM44_02740 PF00271 Helicase conserved C-terminal domain IPM44_02740 PF17191 RecG wedge domain IPM44_02745 PF01479 S4 domain IPM44_02745 PF00579 tRNA synthetases class I (W and Y) IPM44_02750 PF00912 Transglycosylase IPM44_02750 PF00905 Penicillin binding protein transpeptidase domain IPM44_02760 PF18073 Rubredoxin metal binding domain IPM44_02765 PF10431 C-terminal, D2-small domain, of ClpB protein IPM44_02765 PF00004 ATPase family associated with various cellular activities (AAA) IPM44_02765 PF02861 Clp amino terminal domain, pathogenicity island component IPM44_02765 PF17871 AAA lid domain IPM44_02765 PF07724 AAA domain (Cdc48 subfamily) IPM44_02770 PF00575 S1 RNA binding domain IPM44_02770 PF08529 NusA N-terminal domain IPM44_02770 PF13184 NusA-like KH domain IPM44_02775 PF02021 Uncharacterised protein family UPF0102 IPM44_02780 PF01351 Ribonuclease HII IPM44_02800 PF01245 Ribosomal protein L19 IPM44_02810 PF00625 Guanylate kinase IPM44_02815 PF07733 Bacterial DNA polymerase III alpha NTPase domain IPM44_02815 PF14579 Helix-hairpin-helix motif IPM44_02815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IPM44_02815 PF02811 PHP domain IPM44_02840 PF00924 Mechanosensitive ion channel IPM44_02845 PF02637 GatB domain IPM44_02845 PF02934 GatB/GatE catalytic domain IPM44_02855 PF01425 Amidase IPM44_02860 PF02686 Glu-tRNAGln amidotransferase C subunit IPM44_02870 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IPM44_02870 PF03120 NAD-dependent DNA ligase OB-fold domain IPM44_02870 PF01653 NAD-dependent DNA ligase adenylation domain IPM44_02870 PF00533 BRCA1 C Terminus (BRCT) domain IPM44_02870 PF12826 Helix-hairpin-helix motif IPM44_02880 PF01435 Peptidase family M48 IPM44_02885 PF04011 LemA family IPM44_02905 PF00403 Heavy-metal-associated domain IPM44_02910 PF02673 Bacitracin resistance protein BacA IPM44_02920 PF06965 Na+/H+ antiporter 1 IPM44_02920 PF13462 Thioredoxin IPM44_02985 PF02913 FAD linked oxidases, C-terminal domain IPM44_02985 PF01565 FAD binding domain IPM44_03015 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV IPM44_03025 PF01541 GIY-YIG catalytic domain IPM44_03025 PF08459 UvrC Helix-hairpin-helix N-terminal IPM44_03025 PF02151 UvrB/uvrC motif IPM44_03045 PF00005 ABC transporter IPM44_03045 PF17755 UvrA DNA-binding domain IPM44_03045 PF17760 UvrA interaction domain IPM44_03070 PF17757 UvrB interaction domain IPM44_03070 PF12344 Ultra-violet resistance protein B IPM44_03070 PF04851 Type III restriction enzyme, res subunit IPM44_03070 PF00271 Helicase conserved C-terminal domain IPM44_03070 PF02151 UvrB/uvrC motif IPM44_03095 PF01471 Putative peptidoglycan binding domain IPM44_03095 PF07486 Cell Wall Hydrolase IPM44_03100 PF00462 Glutaredoxin IPM44_03105 PF13192 Thioredoxin domain IPM44_03105 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM44_03115 PF00294 pfkB family carbohydrate kinase IPM44_03115 PF01467 Cytidylyltransferase-like IPM44_03125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IPM44_03125 PF02780 Transketolase, C-terminal domain IPM44_03125 PF02779 Transketolase, pyrimidine binding domain IPM44_03130 PF02780 Transketolase, C-terminal domain IPM44_03130 PF02779 Transketolase, pyrimidine binding domain IPM44_03130 PF00456 Transketolase, thiamine diphosphate binding domain IPM44_03140 PF02502 Ribose/Galactose Isomerase IPM44_03145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPM44_03145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IPM44_03160 PF13462 Thioredoxin IPM44_03160 PF06965 Na+/H+ antiporter 1 IPM44_03175 PF00471 Ribosomal protein L33 IPM44_03180 PF03372 Endonuclease/Exonuclease/phosphatase family IPM44_03210 PF03129 Anticodon binding domain IPM44_03210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPM44_03215 PF01207 Dihydrouridine synthase (Dus) IPM44_03250 PF13183 4Fe-4S dicluster domain IPM44_03250 PF01565 FAD binding domain IPM44_03250 PF02913 FAD linked oxidases, C-terminal domain IPM44_03255 PF02913 FAD linked oxidases, C-terminal domain IPM44_03255 PF01565 FAD binding domain IPM44_03270 PF08471 Class II vitamin B12-dependent ribonucleotide reductase IPM44_03270 PF02867 Ribonucleotide reductase, barrel domain IPM44_03295 PF02547 Queuosine biosynthesis protein IPM44_03300 PF01746 tRNA (Guanine-1)-methyltransferase IPM44_03310 PF00886 Ribosomal protein S16 IPM44_03315 PF06470 SMC proteins Flexible Hinge Domain IPM44_03315 PF02463 RecF/RecN/SMC N terminal domain IPM44_03315 PF02463 RecF/RecN/SMC N terminal domain IPM44_03315 PF06470 SMC proteins Flexible Hinge Domain IPM44_03335 PF14622 Ribonuclease-III-like IPM44_03335 PF00035 Double-stranded RNA binding motif IPM44_03340 PF01029 NusB family IPM44_03345 PF01783 Ribosomal L32p protein family IPM44_03390 PF09334 tRNA synthetases class I (M) IPM44_03390 PF08264 Anticodon-binding domain of tRNA IPM44_03390 PF00133 tRNA synthetases class I (I, L, M and V) IPM44_03390 PF13603 Leucyl-tRNA synthetase, Domain 2 IPM44_03405 PF02875 Mur ligase family, glutamate ligase domain IPM44_03405 PF08245 Mur ligase middle domain IPM44_03405 PF01225 Mur ligase family, catalytic domain IPM44_03410 PF07478 D-ala D-ala ligase C-terminus IPM44_03410 PF01820 D-ala D-ala ligase N-terminus IPM44_03455 PF09269 Domain of unknown function (DUF1967) IPM44_03455 PF01926 50S ribosome-binding GTPase IPM44_03455 PF01018 GTP1/OBG IPM44_03465 PF01476 LysM domain IPM44_03465 PF05257 CHAP domain IPM44_03470 PF02618 YceG-like family IPM44_03475 PF03652 Holliday junction resolvase IPM44_03485 PF02491 SHS2 domain inserted in FTSA IPM44_03490 PF01066 CDP-alcohol phosphatidyltransferase IPM44_03500 PF01411 tRNA synthetases class II (A) IPM44_03500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IPM44_03540 PF00266 Aminotransferase class-V IPM44_03545 PF01026 TatD related DNase IPM44_03555 PF08264 Anticodon-binding domain of tRNA IPM44_03555 PF01588 Putative tRNA binding domain IPM44_03555 PF09334 tRNA synthetases class I (M) IPM44_03570 PF00398 Ribosomal RNA adenine dimethylase IPM44_03575 PF06737 Transglycosylase-like domain IPM44_03585 PF03144 Elongation factor Tu domain 2 IPM44_03585 PF00009 Elongation factor Tu GTP binding domain IPM44_03585 PF00679 Elongation factor G C-terminus IPM44_03585 PF14492 Elongation Factor G, domain II IPM44_03590 PF13361 UvrD-like helicase C-terminal domain IPM44_03590 PF00580 UvrD/REP helicase N-terminal domain IPM44_03600 PF00719 Inorganic pyrophosphatase IPM44_03605 PF00121 Triosephosphate isomerase IPM44_03615 PF00224 Pyruvate kinase, barrel domain IPM44_03615 PF02887 Pyruvate kinase, alpha/beta domain IPM44_03615 PF00391 PEP-utilising enzyme, mobile domain IPM44_03625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM44_03625 PF00512 His Kinase A (phospho-acceptor) domain IPM44_03630 PF00486 Transcriptional regulatory protein, C terminal IPM44_03630 PF00072 Response regulator receiver domain IPM44_03640 PF00005 ABC transporter IPM44_03640 PF02687 FtsX-like permease family IPM44_03640 PF12704 MacB-like periplasmic core domain IPM44_03645 PF00005 ABC transporter IPM44_03670 PF05257 CHAP domain IPM44_03715 PF13635 Domain of unknown function (DUF4143) IPM44_03715 PF13173 AAA domain IPM44_03740 PF00005 ABC transporter IPM44_03740 PF02687 FtsX-like permease family IPM44_03740 PF12704 MacB-like periplasmic core domain IPM44_03780 PF00232 Glycosyl hydrolase family 1 IPM44_03790 PF00113 Enolase, C-terminal TIM barrel domain IPM44_03790 PF03952 Enolase, N-terminal domain IPM44_03800 PF00162 Phosphoglycerate kinase IPM44_03810 PF00072 Response regulator receiver domain IPM44_03815 PF00989 PAS fold IPM44_03815 PF00512 His Kinase A (phospho-acceptor) domain IPM44_03815 PF18698 Histidine kinase sensor domain IPM44_03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM44_03815 PF00672 HAMP domain IPM44_03825 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IPM44_03825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IPM44_03840 PF00005 ABC transporter IPM44_03840 PF12848 ABC transporter IPM44_03845 PF01272 Transcription elongation factor, GreA/GreB, C-term IPM44_03845 PF03449 Transcription elongation factor, N-terminal IPM44_03865 PF13393 Histidyl-tRNA synthetase IPM44_03865 PF03129 Anticodon binding domain IPM44_03940 PF03448 MgtE intracellular N domain IPM44_03940 PF01769 Divalent cation transporter IPM44_03940 PF00571 CBS domain IPM44_03945 PF13277 YmdB-like protein IPM44_03950 PF01966 HD domain IPM44_03950 PF00013 KH domain IPM44_03950 PF12072 Domain of unknown function (DUF3552) IPM44_03955 PF00293 NUDIX domain IPM44_03960 PF00814 Glycoprotease family IPM44_03965 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IPM44_03975 PF00437 Type II/IV secretion system protein IPM44_03975 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IPM44_03980 PF00482 Type II secretion system (T2SS), protein F IPM44_03985 PF07963 Prokaryotic N-terminal methylation motif IPM44_03985 PF08334 Type II secretion system (T2SS), protein G IPM44_04015 PF05496 Holliday junction DNA helicase RuvB P-loop domain IPM44_04015 PF05491 RuvB C-terminal winged helix domain IPM44_04015 PF17864 RuvB AAA lid domain IPM44_04020 PF07499 RuvA, C-terminal domain IPM44_04020 PF01330 RuvA N terminal domain IPM44_04025 PF02467 Transcription factor WhiB IPM44_04030 PF02075 Crossover junction endodeoxyribonuclease RuvC IPM44_04040 PF00156 Phosphoribosyl transferase domain IPM44_04050 PF01709 Transcriptional regulator IPM44_04075 PF18030 RimK PreATP-grasp domain IPM44_04075 PF08443 RimK-like ATP-grasp domain IPM44_04080 PF18030 RimK PreATP-grasp domain IPM44_04080 PF08443 RimK-like ATP-grasp domain IPM44_04100 PF00684 DnaJ central domain IPM44_04100 PF01556 DnaJ C terminal domain IPM44_04100 PF00226 DnaJ domain IPM44_04115 PF00012 Hsp70 protein IPM44_04120 PF01025 GrpE IPM44_04125 PF01628 HrcA protein C terminal domain IPM44_04140 PF05257 CHAP domain IPM44_04140 PF01476 LysM domain IPM44_04155 PF03144 Elongation factor Tu domain 2 IPM44_04155 PF06421 GTP-binding protein LepA C-terminus IPM44_04155 PF00679 Elongation factor G C-terminus IPM44_04155 PF00009 Elongation factor Tu GTP binding domain IPM44_04160 PF03023 Lipid II flippase MurJ IPM44_04165 PF00004 ATPase family associated with various cellular activities (AAA) IPM44_04165 PF17862 AAA+ lid domain IPM44_04165 PF01434 Peptidase family M41 IPM44_04170 PF01171 PP-loop family IPM44_04170 PF09179 TilS substrate binding domain IPM44_04220 PF00005 ABC transporter IPM44_04245 PF00717 Peptidase S24-like IPM44_04245 PF01726 LexA DNA binding domain IPM44_04260 PF03949 Malic enzyme, NAD binding domain IPM44_04260 PF00390 Malic enzyme, N-terminal domain IPM44_04285 PF00535 Glycosyl transferase family 2 IPM44_04295 PF16363 GDP-mannose 4,6 dehydratase IPM44_04310 PF00535 Glycosyl transferase family 2 IPM44_04315 PF00535 Glycosyl transferase family 2 IPM44_04320 PF01531 Glycosyl transferase family 11 IPM44_04340 PF00005 ABC transporter IPM44_04340 PF14524 Wzt C-terminal domain IPM44_04350 PF01370 NAD dependent epimerase/dehydratase family IPM44_04385 PF00005 ABC transporter IPM44_04385 PF13732 Domain of unknown function (DUF4162) IPM44_04395 PF07690 Major Facilitator Superfamily IPM44_04405 PF00534 Glycosyl transferases group 1 IPM44_04420 PF13520 Amino acid permease IPM44_04430 PF05970 PIF1-like helicase IPM44_04430 PF14493 Helix-turn-helix domain IPM44_04480 PF13183 4Fe-4S dicluster domain IPM44_04480 PF01565 FAD binding domain IPM44_04480 PF02913 FAD linked oxidases, C-terminal domain IPM44_04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM44_04495 PF00512 His Kinase A (phospho-acceptor) domain IPM44_04495 PF07689 KaiB domain IPM44_04505 PF00970 Oxidoreductase FAD-binding domain IPM44_04505 PF00042 Globin IPM44_04505 PF00175 Oxidoreductase NAD-binding domain IPM44_04510 PF03167 Uracil DNA glycosylase superfamily IPM44_04545 PF04294 VanW like protein IPM44_04550 PF14804 Jag N-terminus IPM44_04550 PF01424 R3H domain IPM44_04555 PF02096 60Kd inner membrane protein IPM44_04560 PF01809 Putative membrane protein insertion efficiency factor IPM44_04565 PF00825 Ribonuclease P IPM44_04570 PF00468 Ribosomal protein L34 IPM44_04575 PF11638 DnaA N-terminal domain IPM44_04575 PF08299 Bacterial dnaA protein helix-turn-helix IPM44_04575 PF00308 Bacterial dnaA protein IPM44_04580 PF00712 DNA polymerase III beta subunit, N-terminal domain IPM44_04580 PF02767 DNA polymerase III beta subunit, central domain IPM44_04580 PF02768 DNA polymerase III beta subunit, C-terminal domain IPM44_04585 PF02463 RecF/RecN/SMC N terminal domain