locus-tag class description JEQ15_00005 PF00308 Bacterial dnaA protein JEQ15_00005 PF08299 Bacterial dnaA protein helix-turn-helix JEQ15_00005 PF11638 DnaA N-terminal domain JEQ15_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JEQ15_00010 PF02767 DNA polymerase III beta subunit, central domain JEQ15_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JEQ15_00015 PF02463 RecF/RecN/SMC N terminal domain JEQ15_00020 PF01751 Toprim domain JEQ15_00020 PF18053 DNA gyrase B subunit insert domain JEQ15_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_00020 PF00204 DNA gyrase B JEQ15_00020 PF00986 DNA gyrase B subunit, carboxyl terminus JEQ15_00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain JEQ15_00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain JEQ15_00030 PF13649 Methyltransferase domain JEQ15_00035 PF13580 SIS domain JEQ15_00060 PF08340 Domain of unknown function (DUF1732) JEQ15_00060 PF03755 YicC-like family, N-terminal region JEQ15_00065 PF03725 3' exoribonuclease family, domain 2 JEQ15_00065 PF01138 3' exoribonuclease family, domain 1 JEQ15_00070 PF00156 Phosphoribosyl transferase domain JEQ15_00075 PF00440 Bacterial regulatory proteins, tetR family JEQ15_00080 PF00692 dUTPase JEQ15_00085 PF04127 DNA / pantothenate metabolism flavoprotein JEQ15_00085 PF02441 Flavoprotein JEQ15_00090 PF04002 RadC-like JAB domain JEQ15_00095 PF00830 Ribosomal L28 family JEQ15_00100 PF00471 Ribosomal protein L33 JEQ15_00105 PF00534 Glycosyl transferases group 1 JEQ15_00115 PF13439 Glycosyltransferase Family 4 JEQ15_00115 PF00534 Glycosyl transferases group 1 JEQ15_00125 PF04932 O-Antigen ligase JEQ15_00130 PF06827 Zinc finger found in FPG and IleRS JEQ15_00130 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JEQ15_00130 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JEQ15_00135 PF01467 Cytidylyltransferase-like JEQ15_00140 PF00535 Glycosyl transferase family 2 JEQ15_00145 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JEQ15_00155 PF13439 Glycosyltransferase Family 4 JEQ15_00155 PF00534 Glycosyl transferases group 1 JEQ15_00160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JEQ15_00175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JEQ15_00180 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JEQ15_00185 PF01370 NAD dependent epimerase/dehydratase family JEQ15_00190 PF00155 Aminotransferase class I and II JEQ15_00195 PF08240 Alcohol dehydrogenase GroES-like domain JEQ15_00195 PF00107 Zinc-binding dehydrogenase JEQ15_00205 PF04748 Divergent polysaccharide deacetylase JEQ15_00210 PF01551 Peptidase family M23 JEQ15_00215 PF04055 Radical SAM superfamily JEQ15_00215 PF18693 TRAM domain JEQ15_00215 PF00919 Uncharacterized protein family UPF0004 JEQ15_00225 PF00581 Rhodanese-like domain JEQ15_00230 PF02556 Preprotein translocase subunit SecB JEQ15_00235 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JEQ15_00235 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JEQ15_00240 PF06426 Serine acetyltransferase, N-terminal JEQ15_00240 PF00132 Bacterial transferase hexapeptide (six repeats) JEQ15_00245 PF00132 Bacterial transferase hexapeptide (six repeats) JEQ15_00245 PF06426 Serine acetyltransferase, N-terminal JEQ15_00250 PF00588 SpoU rRNA Methylase family JEQ15_00255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JEQ15_00255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JEQ15_00260 PF00535 Glycosyl transferase family 2 JEQ15_00275 PF00535 Glycosyl transferase family 2 JEQ15_00285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JEQ15_00295 PF00483 Nucleotidyl transferase JEQ15_00300 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_00300 PF16527 Two-component sensor protein CpxA, periplasmic domain JEQ15_00300 PF00672 HAMP domain JEQ15_00305 PF00072 Response regulator receiver domain JEQ15_00305 PF00486 Transcriptional regulatory protein, C terminal JEQ15_00310 PF07813 LTXXQ motif family protein JEQ15_00315 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) JEQ15_00330 PF00365 Phosphofructokinase JEQ15_00340 PF00121 Triosephosphate isomerase JEQ15_00345 PF07305 Protein of unknown function (DUF1454) JEQ15_00350 PF05656 Protein of unknown function (DUF805) JEQ15_00355 PF00175 Oxidoreductase NAD-binding domain JEQ15_00355 PF00970 Oxidoreductase FAD-binding domain JEQ15_00360 PF07690 Major Facilitator Superfamily JEQ15_00365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JEQ15_00365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JEQ15_00370 PF00230 Major intrinsic protein JEQ15_00375 PF06005 Cell division protein ZapB JEQ15_00380 PF13657 HipA N-terminal domain JEQ15_00380 PF07804 HipA-like C-terminal domain JEQ15_00385 PF01381 Helix-turn-helix JEQ15_00390 PF03737 Aldolase/RraA JEQ15_00395 PF01040 UbiA prenyltransferase family JEQ15_00400 PF00004 ATPase family associated with various cellular activities (AAA) JEQ15_00400 PF07724 AAA domain (Cdc48 subfamily) JEQ15_00400 PF10431 C-terminal, D2-small domain, of ClpB protein JEQ15_00405 PF00227 Proteasome subunit JEQ15_00410 PF05036 Sporulation related domain JEQ15_00415 PF00356 Bacterial regulatory proteins, lacI family JEQ15_00420 PF00270 DEAD/DEAH box helicase JEQ15_00420 PF00271 Helicase conserved C-terminal domain JEQ15_00420 PF17764 3′ DNA-binding domain (3′BD) JEQ15_00420 PF18074 Primosomal protein N C-terminal domain JEQ15_00420 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JEQ15_00425 PF01197 Ribosomal protein L31 JEQ15_00430 PF07804 HipA-like C-terminal domain JEQ15_00435 PF01340 Met Apo-repressor, MetJ JEQ15_00440 PF01053 Cys/Met metabolism PLP-dependent enzyme JEQ15_00445 PF03447 Homoserine dehydrogenase, NAD binding domain JEQ15_00445 PF00742 Homoserine dehydrogenase JEQ15_00445 PF00696 Amino acid kinase family JEQ15_00450 PF03350 Uncharacterized protein family, UPF0114 JEQ15_00460 PF00311 Phosphoenolpyruvate carboxylase JEQ15_00465 PF00535 Glycosyl transferase family 2 JEQ15_00470 PF00875 DNA photolyase JEQ15_00470 PF03441 FAD binding domain of DNA photolyase JEQ15_00475 PF08946 Osmosensory transporter coiled coil JEQ15_00475 PF00083 Sugar (and other) transporter JEQ15_00480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_00480 PF03466 LysR substrate binding domain JEQ15_00485 PF07687 Peptidase dimerisation domain JEQ15_00485 PF01546 Peptidase family M20/M25/M40 JEQ15_00500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JEQ15_00500 PF00205 Thiamine pyrophosphate enzyme, central domain JEQ15_00500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JEQ15_00505 PF01546 Peptidase family M20/M25/M40 JEQ15_00505 PF07687 Peptidase dimerisation domain JEQ15_00510 PF02774 Semialdehyde dehydrogenase, dimerisation domain JEQ15_00510 PF01118 Semialdehyde dehydrogenase, NAD binding domain JEQ15_00515 PF00696 Amino acid kinase family JEQ15_00520 PF00764 Arginosuccinate synthase JEQ15_00525 PF14698 Argininosuccinate lyase C-terminal JEQ15_00525 PF00206 Lyase JEQ15_00530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_00530 PF03466 LysR substrate binding domain JEQ15_00535 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_00535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JEQ15_00540 PF00440 Bacterial regulatory proteins, tetR family JEQ15_00545 PF07226 Protein of unknown function (DUF1422) JEQ15_00550 PF05958 tRNA (Uracil-5-)-methyltransferase JEQ15_00555 PF07715 TonB-dependent Receptor Plug Domain JEQ15_00555 PF00593 TonB dependent receptor JEQ15_00560 PF01177 Asp/Glu/Hydantoin racemase JEQ15_00595 PF01565 FAD binding domain JEQ15_00595 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JEQ15_00600 PF03099 Biotin/lipoate A/B protein ligase family JEQ15_00600 PF08279 HTH domain JEQ15_00600 PF02237 Biotin protein ligase C terminal domain JEQ15_00605 PF00485 Phosphoribulokinase / Uridine kinase family JEQ15_00630 PF03144 Elongation factor Tu domain 2 JEQ15_00630 PF00009 Elongation factor Tu GTP binding domain JEQ15_00630 PF03143 Elongation factor Tu C-terminal domain JEQ15_00635 PF04324 BFD-like [2Fe-2S] binding domain JEQ15_00640 PF00210 Ferritin-like domain JEQ15_00645 PF00338 Ribosomal protein S10p/S20e JEQ15_00650 PF00297 Ribosomal protein L3 JEQ15_00655 PF00573 Ribosomal protein L4/L1 family JEQ15_00660 PF00276 Ribosomal protein L23 JEQ15_00665 PF00181 Ribosomal Proteins L2, RNA binding domain JEQ15_00665 PF03947 Ribosomal Proteins L2, C-terminal domain JEQ15_00670 PF00203 Ribosomal protein S19 JEQ15_00675 PF00237 Ribosomal protein L22p/L17e JEQ15_00680 PF00189 Ribosomal protein S3, C-terminal domain JEQ15_00680 PF07650 KH domain JEQ15_00685 PF00252 Ribosomal protein L16p/L10e JEQ15_00690 PF00831 Ribosomal L29 protein JEQ15_00695 PF00366 Ribosomal protein S17 JEQ15_00700 PF00238 Ribosomal protein L14p/L23e JEQ15_00705 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JEQ15_00710 PF00673 ribosomal L5P family C-terminus JEQ15_00710 PF00281 Ribosomal protein L5 JEQ15_00715 PF00253 Ribosomal protein S14p/S29e JEQ15_00720 PF00410 Ribosomal protein S8 JEQ15_00725 PF00347 Ribosomal protein L6 JEQ15_00730 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JEQ15_00735 PF03719 Ribosomal protein S5, C-terminal domain JEQ15_00735 PF00333 Ribosomal protein S5, N-terminal domain JEQ15_00740 PF00327 Ribosomal protein L30p/L7e JEQ15_00745 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JEQ15_00750 PF00344 SecY translocase JEQ15_00755 PF00444 Ribosomal protein L36 JEQ15_00760 PF00416 Ribosomal protein S13/S18 JEQ15_00765 PF00411 Ribosomal protein S11 JEQ15_00770 PF00163 Ribosomal protein S4/S9 N-terminal domain JEQ15_00770 PF01479 S4 domain JEQ15_00775 PF01000 RNA polymerase Rpb3/RpoA insert domain JEQ15_00775 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JEQ15_00775 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JEQ15_00780 PF01196 Ribosomal protein L17 JEQ15_00785 PF13411 MerR HTH family regulatory protein JEQ15_00790 PF03889 Alternative ribosome-rescue factor A JEQ15_00795 PF01741 Large-conductance mechanosensitive channel, MscL JEQ15_00800 PF02080 TrkA-C domain JEQ15_00800 PF02254 TrkA-N domain JEQ15_00805 PF01029 NusB family JEQ15_00805 PF01189 16S rRNA methyltransferase RsmB/F JEQ15_00810 PF00551 Formyl transferase JEQ15_00810 PF02911 Formyl transferase, C-terminal domain JEQ15_00815 PF01327 Polypeptide deformylase JEQ15_00820 PF17782 DprA winged helix domain JEQ15_00820 PF02481 DNA recombination-mediator protein A JEQ15_00825 PF01396 Topoisomerase DNA binding C4 zinc finger JEQ15_00830 PF01300 Telomere recombination JEQ15_00835 PF08501 Shikimate dehydrogenase substrate binding domain JEQ15_00835 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JEQ15_00835 PF01488 Shikimate / quinate 5-dehydrogenase JEQ15_00840 PF07369 Protein of unknown function (DUF1488) JEQ15_00845 PF00132 Bacterial transferase hexapeptide (six repeats) JEQ15_00885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_00885 PF03466 LysR substrate binding domain JEQ15_00890 PF04219 Protein of unknown function, DUF JEQ15_00895 PF01078 Magnesium chelatase, subunit ChlI JEQ15_00895 PF13335 Magnesium chelatase, subunit ChlI C-terminal JEQ15_00900 PF08046 IlvGEDA operon leader peptide JEQ15_00905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JEQ15_00905 PF00205 Thiamine pyrophosphate enzyme, central domain JEQ15_00905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JEQ15_00915 PF01063 Amino-transferase class IV JEQ15_00920 PF00920 Dehydratase family JEQ15_00925 PF00585 C-terminal regulatory domain of Threonine dehydratase JEQ15_00925 PF00291 Pyridoxal-phosphate dependent enzyme JEQ15_00930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_00930 PF03466 LysR substrate binding domain JEQ15_00935 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JEQ15_00935 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JEQ15_00945 PF12323 Helix-turn-helix domain JEQ15_00945 PF01385 Probable transposase JEQ15_00945 PF07282 Putative transposase DNA-binding domain JEQ15_00950 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ JEQ15_00960 PF13361 UvrD-like helicase C-terminal domain JEQ15_00960 PF00580 UvrD/REP helicase N-terminal domain JEQ15_00965 PF02541 Ppx/GppA phosphatase family JEQ15_00970 PF00270 DEAD/DEAH box helicase JEQ15_00970 PF00271 Helicase conserved C-terminal domain JEQ15_00975 PF00085 Thioredoxin JEQ15_00980 PF07497 Rho termination factor, RNA-binding domain JEQ15_00980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JEQ15_00980 PF07498 Rho termination factor, N-terminal domain JEQ15_00985 PF00953 Glycosyl transferase family 4 JEQ15_00990 PF02706 Chain length determinant protein JEQ15_00995 PF02350 UDP-N-acetylglucosamine 2-epimerase JEQ15_01000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JEQ15_01000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JEQ15_01000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JEQ15_01005 PF16363 GDP-mannose 4,6 dehydratase JEQ15_01010 PF00483 Nucleotidyl transferase JEQ15_01020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JEQ15_01025 PF01943 Polysaccharide biosynthesis protein JEQ15_01030 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 JEQ15_01035 PF06899 WzyE protein, O-antigen assembly polymerase JEQ15_01040 PF03808 Glycosyl transferase WecB/TagA/CpsF family JEQ15_01070 PF07719 Tetratricopeptide repeat JEQ15_01070 PF07219 HemY protein N-terminus JEQ15_01075 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JEQ15_01080 PF02602 Uroporphyrinogen-III synthase HemD JEQ15_01085 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JEQ15_01085 PF03900 Porphobilinogen deaminase, C-terminal domain JEQ15_01090 PF01295 Adenylate cyclase, class-I JEQ15_01090 PF12633 Adenylate cyclase NT domain JEQ15_01095 PF01491 Frataxin-like domain JEQ15_01100 PF13627 Prokaryotic lipoprotein-attachment site JEQ15_01105 PF01678 Diaminopimelate epimerase JEQ15_01110 PF04340 Protein of unknown function, DUF484 JEQ15_01115 PF02899 Phage integrase, N-terminal SAM-like domain JEQ15_01115 PF00589 Phage integrase family JEQ15_01120 PF13419 Haloacid dehalogenase-like hydrolase JEQ15_01125 PF13361 UvrD-like helicase C-terminal domain JEQ15_01125 PF00580 UvrD/REP helicase N-terminal domain JEQ15_01135 PF00892 EamA-like transporter family JEQ15_01140 PF03061 Thioesterase superfamily JEQ15_01145 PF02253 Phospholipase A1 JEQ15_01150 PF00270 DEAD/DEAH box helicase JEQ15_01150 PF00271 Helicase conserved C-terminal domain JEQ15_01150 PF00570 HRDC domain JEQ15_01150 PF16124 RecQ zinc-binding JEQ15_01150 PF09382 RQC domain JEQ15_01155 PF12146 Serine aminopeptidase, S33 JEQ15_01170 PF13953 PapC C-terminal domain JEQ15_01170 PF13954 PapC N-terminal domain JEQ15_01170 PF00577 Outer membrane usher protein JEQ15_01175 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_01175 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_01180 PF00419 Fimbrial protein JEQ15_01190 PF12794 Mechanosensitive ion channel inner membrane domain 1 JEQ15_01190 PF12795 Mechanosensitive ion channel porin domain JEQ15_01190 PF00924 Mechanosensitive ion channel JEQ15_01195 PF02666 Phosphatidylserine decarboxylase JEQ15_01200 PF03193 RsgA GTPase JEQ15_01205 PF00929 Exonuclease JEQ15_01235 PF08331 Domain of unknown function (DUF1730) JEQ15_01240 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JEQ15_01245 PF01520 N-acetylmuramoyl-L-alanine amidase JEQ15_01250 PF01119 DNA mismatch repair protein, C-terminal domain JEQ15_01250 PF08676 MutL C terminal dimerisation domain JEQ15_01260 PF17209 Hfq protein JEQ15_01265 PF16360 GTP-binding GTPase Middle Region JEQ15_01265 PF13167 GTP-binding GTPase N-terminal JEQ15_01265 PF01926 50S ribosome-binding GTPase JEQ15_01270 PF12221 Bacterial membrane protein N terminal JEQ15_01270 PF01145 SPFH domain / Band 7 family JEQ15_01275 PF01145 SPFH domain / Band 7 family JEQ15_01280 PF00709 Adenylosuccinate synthetase JEQ15_01285 PF02082 Transcriptional regulator JEQ15_01290 PF17876 Cold shock domain JEQ15_01290 PF08461 Ribonuclease R winged-helix domain JEQ15_01290 PF08206 Ribonuclease B OB domain JEQ15_01290 PF00773 RNB domain JEQ15_01290 PF00575 S1 RNA binding domain JEQ15_01295 PF00588 SpoU rRNA Methylase family JEQ15_01295 PF08032 RNA 2'-O ribose methyltransferase substrate binding JEQ15_01300 PF01250 Ribosomal protein S6 JEQ15_01305 PF00436 Single-strand binding protein family JEQ15_01310 PF01084 Ribosomal protein S18 JEQ15_01315 PF01281 Ribosomal protein L9, N-terminal domain JEQ15_01315 PF03948 Ribosomal protein L9, C-terminal domain JEQ15_01320 PF08525 Opacity-associated protein A N-terminal motif JEQ15_01320 PF04225 Opacity-associated protein A LysM-like domain JEQ15_01325 PF01197 Ribosomal protein L31 JEQ15_01330 PF00444 Ribosomal protein L36 JEQ15_01335 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JEQ15_01340 PF00171 Aldehyde dehydrogenase family JEQ15_01345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JEQ15_01345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JEQ15_01350 PF00459 Inositol monophosphatase family JEQ15_01355 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JEQ15_01360 PF06526 Protein of unknown function (DUF1107) JEQ15_01365 PF00571 CBS domain JEQ15_01365 PF03471 Transporter associated domain JEQ15_01365 PF01595 Cyclin M transmembrane N-terminal domain JEQ15_01370 PF01625 Peptide methionine sulfoxide reductase JEQ15_01375 PF01103 Surface antigen JEQ15_01375 PF07244 Surface antigen variable number repeat JEQ15_01375 PF17243 POTRA domain TamA domain 1 JEQ15_01380 PF04357 TamB, inner membrane protein subunit of TAM complex JEQ15_01385 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JEQ15_01405 PF00719 Inorganic pyrophosphatase JEQ15_01410 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JEQ15_01415 PF01225 Mur ligase family, catalytic domain JEQ15_01415 PF02875 Mur ligase family, glutamate ligase domain JEQ15_01415 PF08245 Mur ligase middle domain JEQ15_01420 PF01316 Arginine repressor, DNA binding domain JEQ15_01420 PF02863 Arginine repressor, C-terminal domain JEQ15_01425 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JEQ15_01425 PF00056 lactate/malate dehydrogenase, NAD binding domain JEQ15_01430 PF13693 Winged helix-turn-helix DNA-binding JEQ15_01445 PF00348 Polyprenyl synthetase JEQ15_01450 PF00829 Ribosomal prokaryotic L21 protein JEQ15_01455 PF01016 Ribosomal L27 protein JEQ15_01460 PF01018 GTP1/OBG JEQ15_01460 PF01926 50S ribosome-binding GTPase JEQ15_01465 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JEQ15_01470 PF03449 Transcription elongation factor, N-terminal JEQ15_01470 PF01272 Transcription elongation factor, GreA/GreB, C-term JEQ15_01475 PF01985 CRS1 / YhbY (CRM) domain JEQ15_01480 PF01728 FtsJ-like methyltransferase JEQ15_01485 PF01434 Peptidase family M41 JEQ15_01485 PF00004 ATPase family associated with various cellular activities (AAA) JEQ15_01485 PF17862 AAA+ lid domain JEQ15_01485 PF06480 FtsH Extracellular JEQ15_01490 PF00809 Pterin binding enzyme JEQ15_01495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JEQ15_01495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JEQ15_01495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JEQ15_01495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JEQ15_01500 PF03840 Preprotein translocase SecG subunit JEQ15_01515 PF02576 RimP N-terminal domain JEQ15_01515 PF17384 RimP C-terminal SH3 domain JEQ15_01520 PF13184 NusA-like KH domain JEQ15_01520 PF08529 NusA N-terminal domain JEQ15_01520 PF00575 S1 RNA binding domain JEQ15_01525 PF04760 Translation initiation factor IF-2, N-terminal region JEQ15_01525 PF11987 Translation-initiation factor 2 JEQ15_01525 PF03144 Elongation factor Tu domain 2 JEQ15_01525 PF08364 Bacterial translation initiation factor IF-2 associated region JEQ15_01525 PF00009 Elongation factor Tu GTP binding domain JEQ15_01530 PF02033 Ribosome-binding factor A JEQ15_01535 PF16198 tRNA pseudouridylate synthase B C-terminal domain JEQ15_01535 PF01509 TruB family pseudouridylate synthase (N terminal domain) JEQ15_01535 PF09157 Pseudouridine synthase II TruB, C-terminal JEQ15_01540 PF00312 Ribosomal protein S15 JEQ15_01545 PF00013 KH domain JEQ15_01545 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JEQ15_01545 PF01138 3' exoribonuclease family, domain 1 JEQ15_01545 PF00575 S1 RNA binding domain JEQ15_01545 PF03725 3' exoribonuclease family, domain 2 JEQ15_01550 PF13181 Tetratricopeptide repeat JEQ15_01550 PF07719 Tetratricopeptide repeat JEQ15_01555 PF00271 Helicase conserved C-terminal domain JEQ15_01555 PF12343 Cold shock protein DEAD box A JEQ15_01555 PF00270 DEAD/DEAH box helicase JEQ15_01555 PF03880 DbpA RNA binding domain JEQ15_01560 PF13309 HTH domain JEQ15_01560 PF08348 YheO-like PAS domain JEQ15_01570 PF01042 Endoribonuclease L-PSP JEQ15_01575 PF07690 Major Facilitator Superfamily JEQ15_01600 PF00072 Response regulator receiver domain JEQ15_01600 PF04397 LytTr DNA-binding domain JEQ15_01605 PF07694 5TMR of 5TMR-LYT JEQ15_01605 PF06580 Histidine kinase JEQ15_01610 PF00529 HlyD membrane-fusion protein of T1SS JEQ15_01610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JEQ15_01625 PF00419 Fimbrial protein JEQ15_01630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_01630 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_01635 PF00577 Outer membrane usher protein JEQ15_01635 PF13954 PapC N-terminal domain JEQ15_01635 PF13953 PapC C-terminal domain JEQ15_01640 PF00419 Fimbrial protein JEQ15_01650 PF09160 FimH, mannose binding JEQ15_01655 PF01136 Peptidase family U32 JEQ15_01660 PF01136 Peptidase family U32 JEQ15_01665 PF02036 SCP-2 sterol transfer family JEQ15_01670 PF13508 Acetyltransferase (GNAT) domain JEQ15_01675 PF01541 GIY-YIG catalytic domain JEQ15_01680 PF07338 Protein of unknown function (DUF1471) JEQ15_01705 PF13597 Anaerobic ribonucleoside-triphosphate reductase JEQ15_01705 PF03477 ATP cone domain JEQ15_01710 PF01042 Endoribonuclease L-PSP JEQ15_01715 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JEQ15_01715 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JEQ15_01720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JEQ15_01720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JEQ15_01730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JEQ15_01730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JEQ15_01740 PF06877 Regulator of ribonuclease activity B JEQ15_01745 PF02678 Pirin JEQ15_01745 PF05726 Pirin C-terminal cupin domain JEQ15_01750 PF13978 Protein of unknown function (DUF4223) JEQ15_01755 PF00583 Acetyltransferase (GNAT) family JEQ15_01760 PF10458 Valyl tRNA synthetase tRNA binding arm JEQ15_01760 PF08264 Anticodon-binding domain of tRNA JEQ15_01760 PF00133 tRNA synthetases class I (I, L, M and V) JEQ15_01765 PF04364 DNA polymerase III chi subunit, HolC JEQ15_01770 PF00883 Cytosol aminopeptidase family, catalytic domain JEQ15_01770 PF02789 Cytosol aminopeptidase family, N-terminal domain JEQ15_01775 PF03739 Lipopolysaccharide export system permease LptF/LptG JEQ15_01780 PF03739 Lipopolysaccharide export system permease LptF/LptG JEQ15_01785 PF00144 Beta-lactamase JEQ15_01800 PF01797 Transposase IS200 like JEQ15_01805 PF07282 Putative transposase DNA-binding domain JEQ15_01805 PF01385 Probable transposase JEQ15_01805 PF12323 Helix-turn-helix domain JEQ15_01820 PF00472 RF-1 domain JEQ15_01830 PF00455 DeoR C terminal sensor domain JEQ15_01830 PF08220 DeoR-like helix-turn-helix domain JEQ15_01835 PF01791 DeoC/LacD family aldolase JEQ15_01840 PF00294 pfkB family carbohydrate kinase JEQ15_01845 PF13580 SIS domain JEQ15_01850 PF00367 phosphotransferase system, EIIB JEQ15_01850 PF02378 Phosphotransferase system, EIIC JEQ15_01855 PF01418 Helix-turn-helix domain, rpiR family JEQ15_01855 PF01380 SIS domain JEQ15_01870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JEQ15_01870 PF00205 Thiamine pyrophosphate enzyme, central domain JEQ15_01870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JEQ15_01875 PF01842 ACT domain JEQ15_01880 PF01545 Cation efflux family JEQ15_01895 PF00860 Permease family JEQ15_01905 PF00999 Sodium/hydrogen exchanger family JEQ15_01910 PF00892 EamA-like transporter family JEQ15_01915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_01915 PF03466 LysR substrate binding domain JEQ15_01920 PF08267 Cobalamin-independent synthase, N-terminal domain JEQ15_01920 PF01717 Cobalamin-independent synthase, Catalytic domain JEQ15_01930 PF06078 Bacterial protein of unknown function (DUF937) JEQ15_01935 PF01048 Phosphorylase superfamily JEQ15_01940 PF13350 Tyrosine phosphatase family JEQ15_01945 PF09335 SNARE associated Golgi protein JEQ15_01950 PF02646 RmuC family JEQ15_01955 PF01209 ubiE/COQ5 methyltransferase family JEQ15_01960 PF02036 SCP-2 sterol transfer family JEQ15_01965 PF03109 ABC1 family JEQ15_01970 PF02416 mttA/Hcf106 family JEQ15_01980 PF00902 Sec-independent protein translocase protein (TatC) JEQ15_01985 PF02357 Transcription termination factor nusG JEQ15_01990 PF03575 Peptidase family S51 JEQ15_01995 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JEQ15_02000 PF00175 Oxidoreductase NAD-binding domain JEQ15_02000 PF00970 Oxidoreductase FAD-binding domain JEQ15_02005 PF00108 Thiolase, N-terminal domain JEQ15_02005 PF02803 Thiolase, C-terminal domain JEQ15_02010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JEQ15_02010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JEQ15_02010 PF00378 Enoyl-CoA hydratase/isomerase JEQ15_02015 PF00557 Metallopeptidase family M24 JEQ15_02020 PF01205 Uncharacterized protein family UPF0029 JEQ15_02020 PF09186 Domain of unknown function (DUF1949) JEQ15_02025 PF02386 Cation transport protein JEQ15_02030 PF12724 Flavodoxin domain JEQ15_02060 PF01566 Natural resistance-associated macrophage protein JEQ15_02065 PF03746 LamB/YcsF family JEQ15_02070 PF02682 Carboxyltransferase domain, subdomain C and D JEQ15_02075 PF00364 Biotin-requiring enzyme JEQ15_02075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JEQ15_02075 PF02785 Biotin carboxylase C-terminal domain JEQ15_02075 PF00289 Biotin carboxylase, N-terminal domain JEQ15_02080 PF01925 Sulfite exporter TauE/SafE JEQ15_02095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_02095 PF03466 LysR substrate binding domain JEQ15_02100 PF00196 Bacterial regulatory proteins, luxR family JEQ15_02100 PF00072 Response regulator receiver domain JEQ15_02105 PF00672 HAMP domain JEQ15_02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_02105 PF07730 Histidine kinase JEQ15_02105 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JEQ15_02110 PF07690 Major Facilitator Superfamily JEQ15_02115 PF00384 Molybdopterin oxidoreductase JEQ15_02115 PF14710 Respiratory nitrate reductase alpha N-terminal JEQ15_02115 PF01568 Molydopterin dinucleotide binding domain JEQ15_02120 PF14711 Respiratory nitrate reductase beta C-terminal JEQ15_02120 PF13247 4Fe-4S dicluster domain JEQ15_02125 PF02613 Nitrate reductase delta subunit JEQ15_02130 PF02665 Nitrate reductase gamma subunit JEQ15_02135 PF01070 FMN-dependent dehydrogenase JEQ15_02140 PF00884 Sulfatase JEQ15_02140 PF08019 Phosphoethanolamine transferase EptA/EptB JEQ15_02155 PF01590 GAF domain JEQ15_02155 PF00158 Sigma-54 interaction domain JEQ15_02160 PF00037 4Fe-4S binding domain JEQ15_02160 PF12798 4Fe-4S binding domain JEQ15_02165 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JEQ15_02170 PF01455 HupF/HypC family JEQ15_02175 PF00893 Small Multidrug Resistance protein JEQ15_02180 PF02313 Fumarate reductase subunit D JEQ15_02185 PF02300 Fumarate reductase subunit C JEQ15_02190 PF13085 2Fe-2S iron-sulfur cluster binding domain JEQ15_02190 PF13183 4Fe-4S dicluster domain JEQ15_02195 PF00890 FAD binding domain JEQ15_02195 PF02910 Fumarate reductase flavoprotein C-term JEQ15_02200 PF00152 tRNA synthetases class II (D, K and N) JEQ15_02205 PF03009 Glycerophosphoryl diester phosphodiesterase family JEQ15_02210 PF07690 Major Facilitator Superfamily JEQ15_02215 PF01266 FAD dependent oxidoreductase JEQ15_02215 PF04324 BFD-like [2Fe-2S] binding domain JEQ15_02220 PF00890 FAD binding domain JEQ15_02225 PF13183 4Fe-4S dicluster domain JEQ15_02225 PF02754 Cysteine-rich domain JEQ15_02230 PF00465 Iron-containing alcohol dehydrogenase JEQ15_02235 PF02592 Putative vitamin uptake transporter JEQ15_02240 PF01206 Sulfurtransferase TusA JEQ15_02245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JEQ15_02245 PF00529 HlyD membrane-fusion protein of T1SS JEQ15_02250 PF00873 AcrB/AcrD/AcrF family JEQ15_02255 PF00403 Heavy-metal-associated domain JEQ15_02260 PF07947 YhhN family JEQ15_02270 PF06611 Protein of unknown function (DUF1145) JEQ15_02280 PF00448 SRP54-type protein, GTPase domain JEQ15_02280 PF02881 SRP54-type protein, helical bundle domain JEQ15_02285 PF00005 ABC transporter JEQ15_02290 PF18075 FtsX extracellular domain JEQ15_02290 PF02687 FtsX-like permease family JEQ15_02295 PF00140 Sigma-70 factor, region 1.2 JEQ15_02295 PF04545 Sigma-70, region 4 JEQ15_02295 PF04542 Sigma-70 region 2 JEQ15_02300 PF02595 Glycerate kinase family JEQ15_02305 PF12568 Acetyltransferase (GNAT) domain, PanZ JEQ15_02310 PF07690 Major Facilitator Superfamily JEQ15_02315 PF01047 MarR family JEQ15_02320 PF01435 Peptidase family M48 JEQ15_02325 PF00005 ABC transporter JEQ15_02325 PF17912 MalK OB fold domain JEQ15_02330 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_02335 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_02340 PF13416 Bacterial extracellular solute-binding protein JEQ15_02345 PF03009 Glycerophosphoryl diester phosphodiesterase family JEQ15_02350 PF07690 Major Facilitator Superfamily JEQ15_02375 PF02954 Bacterial regulatory protein, Fis family JEQ15_02380 PF01207 Dihydrouridine synthase (Dus) JEQ15_02390 PF00474 Sodium:solute symporter family JEQ15_02395 PF06196 Protein of unknown function (DUF997) JEQ15_02400 PF02785 Biotin carboxylase C-terminal domain JEQ15_02400 PF00289 Biotin carboxylase, N-terminal domain JEQ15_02400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JEQ15_02405 PF00364 Biotin-requiring enzyme JEQ15_02410 PF01220 Dehydroquinase class II JEQ15_02415 PF08240 Alcohol dehydrogenase GroES-like domain JEQ15_02415 PF00107 Zinc-binding dehydrogenase JEQ15_02425 PF04085 rod shape-determining protein MreC JEQ15_02430 PF04093 rod shape-determining protein MreD JEQ15_02435 PF02545 Maf-like protein JEQ15_02440 PF00575 S1 RNA binding domain JEQ15_02440 PF10150 Ribonuclease E/G family JEQ15_02445 PF13502 AsmA-like C-terminal region JEQ15_02445 PF13116 Protein of unknown function JEQ15_02450 PF00795 Carbon-nitrogen hydrolase JEQ15_02455 PF01523 Putative modulator of DNA gyrase JEQ15_02465 PF01337 Barstar (barnase inhibitor) JEQ15_02470 PF04751 Protein of unknown function (DUF615) JEQ15_02475 PF01523 Putative modulator of DNA gyrase JEQ15_02480 PF01272 Transcription elongation factor, GreA/GreB, C-term JEQ15_02480 PF14760 Rnk N-terminus JEQ15_02485 PF00381 PTS HPr component phosphorylation site JEQ15_02490 PF03668 P-loop ATPase protein family JEQ15_02495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JEQ15_02500 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JEQ15_02505 PF04552 Sigma-54, DNA binding domain JEQ15_02505 PF04963 Sigma-54 factor, core binding domain JEQ15_02505 PF00309 Sigma-54 factor, Activator interacting domain (AID) JEQ15_02510 PF00005 ABC transporter JEQ15_02510 PF12399 Branched-chain amino acid ATP-binding cassette transporter JEQ15_02515 PF03968 OstA-like protein JEQ15_02520 PF06835 Lipopolysaccharide-assembly, LptC-related JEQ15_02530 PF00571 CBS domain JEQ15_02530 PF01380 SIS domain JEQ15_02535 PF01699 Sodium/calcium exchanger protein JEQ15_02540 PF00005 ABC transporter JEQ15_02545 PF02405 Permease MlaE JEQ15_02550 PF02470 MlaD protein JEQ15_02555 PF05494 MlaC protein JEQ15_02565 PF01722 BolA-like protein JEQ15_02570 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JEQ15_02590 PF13180 PDZ domain JEQ15_02595 PF13180 PDZ domain JEQ15_02595 PF00595 PDZ domain JEQ15_02600 PF06295 Protein of unknown function (DUF1043) JEQ15_02605 PF03969 AFG1-like ATPase JEQ15_02610 PF00572 Ribosomal protein L13 JEQ15_02615 PF00380 Ribosomal protein S9/S16 JEQ15_02620 PF00043 Glutathione S-transferase, C-terminal domain JEQ15_02620 PF02798 Glutathione S-transferase, N-terminal domain JEQ15_02625 PF04386 Stringent starvation protein B JEQ15_02630 PF13411 MerR HTH family regulatory protein JEQ15_02635 PF07687 Peptidase dimerisation domain JEQ15_02635 PF01546 Peptidase family M20/M25/M40 JEQ15_02640 PF03606 C4-dicarboxylate anaerobic carrier JEQ15_02645 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_02645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JEQ15_02650 PF01645 Conserved region in glutamate synthase JEQ15_02650 PF01493 GXGXG motif JEQ15_02650 PF00310 Glutamine amidotransferases class-II JEQ15_02650 PF04898 Glutamate synthase central domain JEQ15_02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_02655 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_02655 PF18415 Histidine kinase receptor ArcB trans-membrane domain JEQ15_02655 PF01627 Hpt domain JEQ15_02655 PF00989 PAS fold JEQ15_02655 PF00072 Response regulator receiver domain JEQ15_02665 PF00912 Transglycosylase JEQ15_02670 PF12833 Helix-turn-helix domain JEQ15_02675 PF01774 UreD urease accessory protein JEQ15_02680 PF00547 Urease, gamma subunit JEQ15_02685 PF00699 Urease beta subunit JEQ15_02690 PF01979 Amidohydrolase family JEQ15_02690 PF00449 Urease alpha-subunit, N-terminal domain JEQ15_02695 PF05194 UreE urease accessory protein, C-terminal domain JEQ15_02695 PF02814 UreE urease accessory protein, N-terminal domain JEQ15_02700 PF01730 UreF JEQ15_02705 PF02492 CobW/HypB/UreG, nucleotide-binding domain JEQ15_02710 PF04972 BON domain JEQ15_02715 PF13580 SIS domain JEQ15_02720 PF02021 Uncharacterised protein family UPF0102 JEQ15_02725 PF04348 LppC putative lipoprotein JEQ15_02730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JEQ15_02740 PF02678 Pirin JEQ15_02740 PF17954 Quercetinase C-terminal cupin domain JEQ15_02745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_02745 PF03466 LysR substrate binding domain JEQ15_02750 PF07681 DoxX JEQ15_02760 PF07332 Putative Actinobacterial Holin-X, holin superfamily III JEQ15_02765 PF05957 Bacterial protein of unknown function (DUF883) JEQ15_02770 PF09335 SNARE associated Golgi protein JEQ15_02775 PF00375 Sodium:dicarboxylate symporter family JEQ15_02780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JEQ15_02780 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_02790 PF00675 Insulinase (Peptidase family M16) JEQ15_02790 PF05193 Peptidase M16 inactive domain JEQ15_02795 PF06472 ABC transporter transmembrane region 2 JEQ15_02795 PF00005 ABC transporter JEQ15_02800 PF07715 TonB-dependent Receptor Plug Domain JEQ15_02810 PF08281 Sigma-70, region 4 JEQ15_02810 PF04542 Sigma-70 region 2 JEQ15_02820 PF12323 Helix-turn-helix domain JEQ15_02820 PF01385 Probable transposase JEQ15_02820 PF07282 Putative transposase DNA-binding domain JEQ15_02825 PF01797 Transposase IS200 like JEQ15_02830 PF00005 ABC transporter JEQ15_02830 PF12848 ABC transporter JEQ15_02835 PF01464 Transglycosylase SLT domain JEQ15_02835 PF14718 Soluble lytic murein transglycosylase L domain JEQ15_02840 PF01371 Trp repressor protein JEQ15_02845 PF01931 Protein of unknown function DUF84 JEQ15_02850 PF00300 Histidine phosphatase superfamily (branch 1) JEQ15_02855 PF12833 Helix-turn-helix domain JEQ15_02855 PF06445 GyrI-like small molecule binding domain JEQ15_02860 PF05981 CreA protein JEQ15_02865 PF00072 Response regulator receiver domain JEQ15_02865 PF00486 Transcriptional regulatory protein, C terminal JEQ15_02870 PF01842 ACT domain JEQ15_02870 PF13840 ACT domain JEQ15_02870 PF00742 Homoserine dehydrogenase JEQ15_02870 PF03447 Homoserine dehydrogenase, NAD binding domain JEQ15_02870 PF00696 Amino acid kinase family JEQ15_02875 PF00288 GHMP kinases N terminal domain JEQ15_02875 PF08544 GHMP kinases C terminal JEQ15_02880 PF00291 Pyridoxal-phosphate dependent enzyme JEQ15_02880 PF14821 Threonine synthase N terminus JEQ15_02890 PF03883 Peroxide stress protein YaaA JEQ15_02895 PF00923 Transaldolase/Fructose-6-phosphate aldolase JEQ15_02905 PF00994 Probable molybdopterin binding domain JEQ15_02910 PF00012 Hsp70 protein JEQ15_02915 PF00226 DnaJ domain JEQ15_02915 PF01556 DnaJ C terminal domain JEQ15_02915 PF00684 DnaJ central domain JEQ15_02920 PF06965 Na+/H+ antiporter 1 JEQ15_02925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_02925 PF03466 LysR substrate binding domain JEQ15_02930 PF01649 Ribosomal protein S20 JEQ15_02935 PF06574 FAD synthetase JEQ15_02935 PF01687 Riboflavin kinase JEQ15_02940 PF06827 Zinc finger found in FPG and IleRS JEQ15_02940 PF00133 tRNA synthetases class I (I, L, M and V) JEQ15_02940 PF08264 Anticodon-binding domain of tRNA JEQ15_02945 PF01252 Signal peptidase (SPase) II JEQ15_02950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JEQ15_02955 PF02401 LytB protein JEQ15_02960 PF01113 Dihydrodipicolinate reductase, N-terminus JEQ15_02960 PF05173 Dihydrodipicolinate reductase, C-terminus JEQ15_02965 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JEQ15_02965 PF00117 Glutamine amidotransferase class-I JEQ15_02970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JEQ15_02970 PF02142 MGS-like domain JEQ15_02970 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JEQ15_02980 PF02369 Bacterial Ig-like domain (group 1) JEQ15_02980 PF11924 Inverse autotransporter, beta-domain JEQ15_02980 PF09134 Invasin, domain 3 JEQ15_02985 PF00248 Aldo/keto reductase family JEQ15_02990 PF00465 Iron-containing alcohol dehydrogenase JEQ15_02995 PF09335 SNARE associated Golgi protein JEQ15_03000 PF01053 Cys/Met metabolism PLP-dependent enzyme JEQ15_03005 PF01618 MotA/TolQ/ExbB proton channel family JEQ15_03010 PF02472 Biopolymer transport protein ExbD/TolR JEQ15_03020 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal JEQ15_03020 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JEQ15_03025 PF13247 4Fe-4S dicluster domain JEQ15_03030 PF03916 Polysulphide reductase, NrfD JEQ15_03035 PF00374 Nickel-dependent hydrogenase JEQ15_03040 PF01750 Hydrogenase maturation protease JEQ15_03045 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE JEQ15_03050 PF02492 CobW/HypB/UreG, nucleotide-binding domain JEQ15_03055 PF01455 HupF/HypC family JEQ15_03060 PF01924 Hydrogenase formation hypA family JEQ15_03065 PF02769 AIR synthase related protein, C-terminal domain JEQ15_03065 PF00586 AIR synthase related protein, N-terminal domain JEQ15_03070 PF04143 Sulphur transport JEQ15_03075 PF01206 Sulfurtransferase TusA JEQ15_03080 PF04381 Putative exonuclease, RdgC JEQ15_03085 PF13609 Gram-negative porin JEQ15_03090 PF02872 5'-nucleotidase, C-terminal domain JEQ15_03090 PF00149 Calcineurin-like phosphoesterase JEQ15_03095 PF00445 Ribonuclease T2 family JEQ15_03100 PF02872 5'-nucleotidase, C-terminal domain JEQ15_03100 PF17936 Bacterial Ig domain JEQ15_03100 PF00149 Calcineurin-like phosphoesterase JEQ15_03110 PF13476 AAA domain JEQ15_03115 PF12320 Type 5 capsule protein repressor C-terminal domain JEQ15_03115 PF00149 Calcineurin-like phosphoesterase JEQ15_03120 PF00072 Response regulator receiver domain JEQ15_03120 PF00486 Transcriptional regulatory protein, C terminal JEQ15_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_03125 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_03125 PF00989 PAS fold JEQ15_03125 PF11808 Phosphate regulon sensor protein PhoR JEQ15_03130 PF05525 Branched-chain amino acid transport protein JEQ15_03170 PF01292 Prokaryotic cytochrome b561 JEQ15_03175 PF13247 4Fe-4S dicluster domain JEQ15_03185 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 JEQ15_03185 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain JEQ15_03190 PF12800 4Fe-4S binding domain JEQ15_03190 PF13247 4Fe-4S dicluster domain JEQ15_03200 PF10417 C-terminal domain of 1-Cys peroxiredoxin JEQ15_03200 PF00578 AhpC/TSA family JEQ15_03205 PF04336 Acyl carrier protein phosphodiesterase JEQ15_03210 PF02547 Queuosine biosynthesis protein JEQ15_03215 PF01702 Queuine tRNA-ribosyltransferase JEQ15_03220 PF02699 Preprotein translocase subunit JEQ15_03225 PF02355 Protein export membrane protein JEQ15_03225 PF13721 SecD export protein N-terminal TM region JEQ15_03225 PF07549 SecD/SecF GG Motif JEQ15_03230 PF07549 SecD/SecF GG Motif JEQ15_03230 PF02355 Protein export membrane protein JEQ15_03235 PF03477 ATP cone domain JEQ15_03240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JEQ15_03240 PF01872 RibD C-terminal domain JEQ15_03245 PF00885 6,7-dimethyl-8-ribityllumazine synthase JEQ15_03250 PF01029 NusB family JEQ15_03255 PF02769 AIR synthase related protein, C-terminal domain JEQ15_03255 PF00586 AIR synthase related protein, N-terminal domain JEQ15_03260 PF03831 PhnA domain JEQ15_03260 PF08274 PhnA Zinc-Ribbon JEQ15_03270 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JEQ15_03275 PF00356 Bacterial regulatory proteins, lacI family JEQ15_03280 PF00294 pfkB family carbohydrate kinase JEQ15_03285 PF13407 Periplasmic binding protein domain JEQ15_03290 PF02653 Branched-chain amino acid transport system / permease component JEQ15_03295 PF00005 ABC transporter JEQ15_03300 PF05025 RbsD / FucU transport protein family JEQ15_03305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JEQ15_03305 PF02779 Transketolase, pyrimidine binding domain JEQ15_03305 PF02780 Transketolase, C-terminal domain JEQ15_03310 PF00348 Polyprenyl synthetase JEQ15_03315 PF02609 Exonuclease VII small subunit JEQ15_03320 PF02568 Thiamine biosynthesis protein (ThiI) JEQ15_03320 PF02926 THUMP domain JEQ15_03330 PF01965 DJ-1/PfpI family JEQ15_03335 PF08546 Ketopantoate reductase PanE/ApbA C terminal JEQ15_03335 PF02558 Ketopantoate reductase PanE/ApbA JEQ15_03340 PF04461 Protein of unknown function (DUF520) JEQ15_03345 PF07690 Major Facilitator Superfamily JEQ15_03350 PF01040 UbiA prenyltransferase family JEQ15_03355 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JEQ15_03360 PF00510 Cytochrome c oxidase subunit III JEQ15_03365 PF00115 Cytochrome C and Quinol oxidase polypeptide I JEQ15_03370 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JEQ15_03370 PF06481 COX Aromatic Rich Motif JEQ15_03375 PF03502 Nucleoside-specific channel-forming protein, Tsx JEQ15_03380 PF00270 DEAD/DEAH box helicase JEQ15_03380 PF00271 Helicase conserved C-terminal domain JEQ15_03380 PF03880 DbpA RNA binding domain JEQ15_03385 PF07690 Major Facilitator Superfamily JEQ15_03390 PF03923 Uncharacterized lipoprotein JEQ15_03390 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JEQ15_03395 PF01722 BolA-like protein JEQ15_03400 PF05698 Bacterial trigger factor protein (TF) C-terminus JEQ15_03400 PF05697 Bacterial trigger factor protein (TF) JEQ15_03400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JEQ15_03405 PF00574 Clp protease JEQ15_03410 PF07724 AAA domain (Cdc48 subfamily) JEQ15_03410 PF10431 C-terminal, D2-small domain, of ClpB protein JEQ15_03410 PF06689 ClpX C4-type zinc finger JEQ15_03415 PF00004 ATPase family associated with various cellular activities (AAA) JEQ15_03415 PF05362 Lon protease (S16) C-terminal proteolytic domain JEQ15_03415 PF02190 ATP-dependent protease La (LON) substrate-binding domain JEQ15_03420 PF00216 Bacterial DNA-binding protein JEQ15_03425 PF13145 PPIC-type PPIASE domain JEQ15_03430 PF10531 SLBB domain JEQ15_03440 PF06508 Queuosine biosynthesis protein QueC JEQ15_03445 PF01037 Lrp/AsnC ligand binding domain JEQ15_03445 PF13404 AsnC-type helix-turn-helix domain JEQ15_03450 PF00664 ABC transporter transmembrane region JEQ15_03450 PF00005 ABC transporter JEQ15_03455 PF00664 ABC transporter transmembrane region JEQ15_03455 PF00005 ABC transporter JEQ15_03460 PF00543 Nitrogen regulatory protein P-II JEQ15_03465 PF00909 Ammonium Transporter Family JEQ15_03480 PF05321 Haemolysin expression modulating protein JEQ15_03490 PF00873 AcrB/AcrD/AcrF family JEQ15_03495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JEQ15_03495 PF00529 HlyD membrane-fusion protein of T1SS JEQ15_03500 PF08361 MAATS-type transcriptional repressor, C-terminal region JEQ15_03500 PF00440 Bacterial regulatory proteins, tetR family JEQ15_03505 PF02635 DsrE/DsrF-like family JEQ15_03510 PF12795 Mechanosensitive ion channel porin domain JEQ15_03510 PF00924 Mechanosensitive ion channel JEQ15_03510 PF12794 Mechanosensitive ion channel inner membrane domain 1 JEQ15_03525 PF00156 Phosphoribosyl transferase domain JEQ15_03530 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JEQ15_03530 PF12170 DNA polymerase III tau subunit V interacting with alpha JEQ15_03530 PF12169 DNA polymerase III subunits gamma and tau domain III JEQ15_03535 PF02575 YbaB/EbfC DNA-binding family JEQ15_03540 PF02132 RecR protein JEQ15_03540 PF13662 Toprim domain JEQ15_03545 PF13722 5TM C-terminal transporter carbon starvation CstA JEQ15_03545 PF02554 Carbon starvation protein CstA JEQ15_03550 PF04328 Selenoprotein, putative JEQ15_03555 PF02492 CobW/HypB/UreG, nucleotide-binding domain JEQ15_03555 PF07683 Cobalamin synthesis protein cobW C-terminal domain JEQ15_03560 PF03313 Serine dehydratase alpha chain JEQ15_03565 PF03606 C4-dicarboxylate anaerobic carrier JEQ15_03570 PF01546 Peptidase family M20/M25/M40 JEQ15_03570 PF07687 Peptidase dimerisation domain JEQ15_03580 PF01554 MatE JEQ15_03585 PF01118 Semialdehyde dehydrogenase, NAD binding domain JEQ15_03585 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain JEQ15_03590 PF09370 Phosphoenolpyruvate hydrolase-like JEQ15_03625 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) JEQ15_03630 PF00394 Multicopper oxidase JEQ15_03630 PF07731 Multicopper oxidase JEQ15_03630 PF07732 Multicopper oxidase JEQ15_03630 PF10518 TAT (twin-arginine translocation) pathway signal sequence JEQ15_03635 PF00156 Phosphoribosyl transferase domain JEQ15_03640 PF00484 Carbonic anhydrase JEQ15_03645 PF00005 ABC transporter JEQ15_03650 PF01061 ABC-2 type transporter JEQ15_03655 PF07690 Major Facilitator Superfamily JEQ15_03660 PF10735 Protein of unknown function (DUF2526) JEQ15_03675 PF07282 Putative transposase DNA-binding domain JEQ15_03675 PF12323 Helix-turn-helix domain JEQ15_03675 PF01385 Probable transposase JEQ15_03685 PF04261 Dyp-type peroxidase family JEQ15_03700 PF13473 Cupredoxin-like domain JEQ15_03705 PF10634 Fe2+ transport protein JEQ15_03710 PF01527 Transposase JEQ15_03735 PF03738 Glutathionylspermidine synthase preATP-grasp JEQ15_03735 PF05257 CHAP domain JEQ15_03740 PF03466 LysR substrate binding domain JEQ15_03740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_03745 PF02447 GntP family permease JEQ15_03750 PF00291 Pyridoxal-phosphate dependent enzyme JEQ15_03755 PF00005 ABC transporter JEQ15_03755 PF08402 TOBE domain JEQ15_03760 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_03770 PF07690 Major Facilitator Superfamily JEQ15_03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_03775 PF07730 Histidine kinase JEQ15_03775 PF05231 MASE1 JEQ15_03780 PF00196 Bacterial regulatory proteins, luxR family JEQ15_03780 PF00072 Response regulator receiver domain JEQ15_03785 PF02261 Aspartate decarboxylase JEQ15_03790 PF02569 Pantoate-beta-alanine ligase JEQ15_03795 PF02548 Ketopantoate hydroxymethyltransferase JEQ15_03800 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JEQ15_03805 PF01743 Poly A polymerase head domain JEQ15_03805 PF12626 Polymerase A arginine-rich C-terminus JEQ15_03805 PF12627 Probable RNA and SrmB- binding site of polymerase A JEQ15_03815 PF01258 Prokaryotic dksA/traR C4-type zinc finger JEQ15_03820 PF03749 Sugar fermentation stimulation protein RE domain JEQ15_03820 PF17746 SfsA N-terminal OB domain JEQ15_03825 PF00270 DEAD/DEAH box helicase JEQ15_03825 PF08482 ATP-dependent helicase C-terminal JEQ15_03825 PF04408 Helicase associated domain (HA2) JEQ15_03825 PF00271 Helicase conserved C-terminal domain JEQ15_03830 PF00905 Penicillin binding protein transpeptidase domain JEQ15_03830 PF00912 Transglycosylase JEQ15_03830 PF14814 Bifunctional transglycosylase second domain JEQ15_03830 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal JEQ15_03835 PF00202 Aminotransferase class-III JEQ15_03840 PF01521 Iron-sulphur cluster biosynthesis JEQ15_03845 PF01497 Periplasmic binding protein JEQ15_03850 PF01048 Phosphorylase superfamily JEQ15_03855 PF01966 HD domain JEQ15_03855 PF13286 Phosphohydrolase-associated domain JEQ15_03860 PF01938 TRAM domain JEQ15_03860 PF05958 tRNA (Uracil-5-)-methyltransferase JEQ15_03865 PF13291 ACT domain JEQ15_03865 PF04607 Region found in RelA / SpoT proteins JEQ15_03865 PF02824 TGS domain JEQ15_03870 PF03819 MazG nucleotide pyrophosphohydrolase domain JEQ15_03875 PF06418 CTP synthase N-terminus JEQ15_03875 PF00117 Glutamine amidotransferase class-I JEQ15_03880 PF00113 Enolase, C-terminal TIM barrel domain JEQ15_03880 PF03952 Enolase, N-terminal domain JEQ15_03885 PF00939 Sodium:sulfate symporter transmembrane region JEQ15_03890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JEQ15_03890 PF00205 Thiamine pyrophosphate enzyme, central domain JEQ15_03890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JEQ15_03895 PF01476 LysM domain JEQ15_03895 PF01464 Transglycosylase SLT domain JEQ15_03900 PF16123 Hydroxyacylglutathione hydrolase C-terminus JEQ15_03900 PF00753 Metallo-beta-lactamase superfamily JEQ15_03905 PF08241 Methyltransferase domain JEQ15_03910 PF00075 RNase H JEQ15_03915 PF00929 Exonuclease JEQ15_03925 PF01032 FecCD transport family JEQ15_03930 PF00005 ABC transporter JEQ15_03940 PF06276 Ferric iron reductase FhuF-like transporter JEQ15_03940 PF04183 IucA / IucC family JEQ15_03945 PF07715 TonB-dependent Receptor Plug Domain JEQ15_03945 PF00593 TonB dependent receptor JEQ15_03950 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JEQ15_03955 PF00291 Pyridoxal-phosphate dependent enzyme JEQ15_03960 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain JEQ15_03965 PF07690 Major Facilitator Superfamily JEQ15_03980 PF02779 Transketolase, pyrimidine binding domain JEQ15_03980 PF02780 Transketolase, C-terminal domain JEQ15_03980 PF00456 Transketolase, thiamine diphosphate binding domain JEQ15_03985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JEQ15_03985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JEQ15_03990 PF00162 Phosphoglycerate kinase JEQ15_03995 PF01116 Fructose-bisphosphate aldolase class-II JEQ15_04000 PF05154 TM2 domain JEQ15_04005 PF00854 POT family JEQ15_04010 PF01613 Flavin reductase like domain JEQ15_04020 PF01047 MarR family JEQ15_04025 PF02028 BCCT, betaine/carnitine/choline family transporter JEQ15_04040 PF00753 Metallo-beta-lactamase superfamily JEQ15_04040 PF12706 Beta-lactamase superfamily domain JEQ15_04045 PF00419 Fimbrial protein JEQ15_04050 PF13953 PapC C-terminal domain JEQ15_04050 PF13954 PapC N-terminal domain JEQ15_04050 PF00577 Outer membrane usher protein JEQ15_04055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_04055 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_04060 PF00419 Fimbrial protein JEQ15_04065 PF00419 Fimbrial protein JEQ15_04085 PF00589 Phage integrase family JEQ15_04090 PF00419 Fimbrial protein JEQ15_04100 PF00577 Outer membrane usher protein JEQ15_04100 PF13954 PapC N-terminal domain JEQ15_04100 PF13953 PapC C-terminal domain JEQ15_04105 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_04105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_04110 PF00419 Fimbrial protein JEQ15_04120 PF00419 Fimbrial protein JEQ15_04135 PF03806 AbgT putative transporter family JEQ15_04140 PF09350 Domain of unknown function (DUF1992) JEQ15_04145 PF02627 Carboxymuconolactone decarboxylase family JEQ15_04150 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JEQ15_04155 PF02321 Outer membrane efflux protein JEQ15_04160 PF00529 HlyD membrane-fusion protein of T1SS JEQ15_04165 PF00664 ABC transporter transmembrane region JEQ15_04165 PF00005 ABC transporter JEQ15_04170 PF00413 Matrixin JEQ15_04170 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JEQ15_04170 PF08548 Peptidase M10 serralysin C terminal JEQ15_04175 PF08548 Peptidase M10 serralysin C terminal JEQ15_04175 PF00413 Matrixin JEQ15_04175 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JEQ15_04180 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JEQ15_04180 PF08548 Peptidase M10 serralysin C terminal JEQ15_04180 PF00413 Matrixin JEQ15_04185 PF00413 Matrixin JEQ15_04185 PF08548 Peptidase M10 serralysin C terminal JEQ15_04185 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JEQ15_04195 PF07687 Peptidase dimerisation domain JEQ15_04195 PF01546 Peptidase family M20/M25/M40 JEQ15_04205 PF13419 Haloacid dehalogenase-like hydrolase JEQ15_04210 PF03633 Glycosyl hydrolase family 65, C-terminal domain JEQ15_04210 PF03632 Glycosyl hydrolase family 65 central catalytic domain JEQ15_04210 PF03636 Glycosyl hydrolase family 65, N-terminal domain JEQ15_04215 PF00367 phosphotransferase system, EIIB JEQ15_04215 PF02378 Phosphotransferase system, EIIC JEQ15_04220 PF00356 Bacterial regulatory proteins, lacI family JEQ15_04230 PF12833 Helix-turn-helix domain JEQ15_04235 PF12833 Helix-turn-helix domain JEQ15_04260 PF03412 Peptidase C39 family JEQ15_04260 PF00664 ABC transporter transmembrane region JEQ15_04260 PF00005 ABC transporter JEQ15_04270 PF16925 Tetracyclin repressor-like, C-terminal domain JEQ15_04270 PF00440 Bacterial regulatory proteins, tetR family JEQ15_04275 PF13520 Amino acid permease JEQ15_04280 PF01276 Orn/Lys/Arg decarboxylase, major domain JEQ15_04280 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JEQ15_04280 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JEQ15_04285 PF10940 Protein of unknown function (DUF2618) JEQ15_04340 PF00665 Integrase core domain JEQ15_04340 PF13333 Integrase core domain JEQ15_04340 PF13276 HTH-like domain JEQ15_04350 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JEQ15_04350 PF01464 Transglycosylase SLT domain JEQ15_04355 PF04362 Bacterial Fe(2+) trafficking JEQ15_04360 PF14815 NUDIX domain JEQ15_04360 PF00730 HhH-GPD superfamily base excision DNA repair protein JEQ15_04360 PF10576 Iron-sulfur binding domain of endonuclease III JEQ15_04360 PF00633 Helix-hairpin-helix motif JEQ15_04365 PF02390 Putative methyltransferase JEQ15_04370 PF04320 Protein with unknown function (DUF469) JEQ15_04375 PF04960 Glutaminase JEQ15_04380 PF11101 Protein of unknown function (DUF2884) JEQ15_04385 PF01497 Periplasmic binding protein JEQ15_04390 PF04055 Radical SAM superfamily JEQ15_04390 PF06969 HemN C-terminal domain JEQ15_04395 PF01725 Ham1 family JEQ15_04400 PF02325 YGGT family JEQ15_04405 PF14748 Pyrroline-5-carboxylate reductase dimerisation JEQ15_04405 PF03807 NADP oxidoreductase coenzyme F420-dependent JEQ15_04410 PF01168 Alanine racemase, N-terminal domain JEQ15_04415 PF00437 Type II/IV secretion system protein JEQ15_04420 PF03652 Holliday junction resolvase JEQ15_04425 PF02622 Uncharacterized ACR, COG1678 JEQ15_04430 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JEQ15_04430 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JEQ15_04435 PF04452 RNA methyltransferase JEQ15_04455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_04455 PF03466 LysR substrate binding domain JEQ15_04460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_04460 PF03466 LysR substrate binding domain JEQ15_04465 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JEQ15_04465 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JEQ15_04470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JEQ15_04470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JEQ15_04470 PF09317 Domain of unknown function (DUF1974) JEQ15_04475 PF13580 SIS domain JEQ15_04480 PF13230 Glutamine amidotransferases class-II JEQ15_04485 PF03734 L,D-transpeptidase catalytic domain JEQ15_04490 PF11973 NQRA C-terminal domain JEQ15_04490 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JEQ15_04495 PF03116 NQR2, RnfD, RnfE family JEQ15_04500 PF04205 FMN-binding domain JEQ15_04505 PF02508 Rnf-Nqr subunit, membrane protein JEQ15_04510 PF02508 Rnf-Nqr subunit, membrane protein JEQ15_04515 PF00970 Oxidoreductase FAD-binding domain JEQ15_04515 PF00111 2Fe-2S iron-sulfur cluster binding domain JEQ15_04515 PF00175 Oxidoreductase NAD-binding domain JEQ15_04520 PF02424 ApbE family JEQ15_04525 PF04400 (Na+)-NQR maturation NqrM JEQ15_04530 PF05532 CsbD-like JEQ15_04535 PF03009 Glycerophosphoryl diester phosphodiesterase family JEQ15_04540 PF00817 impB/mucB/samB family JEQ15_04540 PF11799 impB/mucB/samB family C-terminal domain JEQ15_04540 PF11798 IMS family HHH motif JEQ15_04545 PF00593 TonB dependent receptor JEQ15_04545 PF07715 TonB-dependent Receptor Plug Domain JEQ15_04550 PF01546 Peptidase family M20/M25/M40 JEQ15_04550 PF07687 Peptidase dimerisation domain JEQ15_04555 PF00156 Phosphoribosyl transferase domain JEQ15_04560 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JEQ15_04565 PF07417 Sigma factor-binding transcriptional regulator Crl JEQ15_04570 PF00696 Amino acid kinase family JEQ15_04570 PF01472 PUA domain JEQ15_04575 PF00171 Aldehyde dehydrogenase family JEQ15_04580 PF01202 Shikimate kinase JEQ15_04585 PF01553 Acyltransferase JEQ15_04585 PF00501 AMP-binding enzyme JEQ15_04585 PF13193 AMP-binding enzyme C-terminal domain JEQ15_04590 PF07690 Major Facilitator Superfamily JEQ15_04595 PF02464 Competence-damaged protein JEQ15_04600 PF00154 recA bacterial DNA recombination protein JEQ15_04605 PF02272 DHHA1 domain JEQ15_04605 PF01411 tRNA synthetases class II (A) JEQ15_04605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JEQ15_04610 PF02599 Global regulator protein family JEQ15_04640 PF04262 Glutamate-cysteine ligase JEQ15_04645 PF02664 S-Ribosylhomocysteinase (LuxS) JEQ15_04650 PF01595 Cyclin M transmembrane N-terminal domain JEQ15_04650 PF00571 CBS domain JEQ15_04650 PF03471 Transporter associated domain JEQ15_04655 PF01578 Cytochrome C assembly protein JEQ15_04660 PF00448 SRP54-type protein, GTPase domain JEQ15_04660 PF02881 SRP54-type protein, helical bundle domain JEQ15_04660 PF02978 Signal peptide binding domain JEQ15_04665 PF00886 Ribosomal protein S16 JEQ15_04670 PF05239 PRC-barrel domain JEQ15_04670 PF01782 RimM N-terminal domain JEQ15_04675 PF01746 tRNA (Guanine-1)-methyltransferase JEQ15_04680 PF01245 Ribosomal protein L19 JEQ15_04685 PF00793 DAHP synthetase I family JEQ15_04690 PF02153 Prephenate dehydrogenase JEQ15_04690 PF01817 Chorismate mutase type II JEQ15_04705 PF03605 Anaerobic c4-dicarboxylate membrane transporter JEQ15_04710 PF01817 Chorismate mutase type II JEQ15_04710 PF00800 Prephenate dehydratase JEQ15_04715 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JEQ15_04720 PF13525 Outer membrane lipoprotein JEQ15_04725 PF00849 RNA pseudouridylate synthase JEQ15_04725 PF01479 S4 domain JEQ15_04730 PF02578 Multi-copper polyphenol oxidoreductase laccase JEQ15_04735 PF07724 AAA domain (Cdc48 subfamily) JEQ15_04735 PF17871 AAA lid domain JEQ15_04735 PF02861 Clp amino terminal domain, pathogenicity island component JEQ15_04735 PF10431 C-terminal, D2-small domain, of ClpB protein JEQ15_04735 PF00004 ATPase family associated with various cellular activities (AAA) JEQ15_04765 PF10043 Predicted periplasmic lipoprotein (DUF2279) JEQ15_04770 PF13091 PLD-like domain JEQ15_04775 PF00583 Acetyltransferase (GNAT) family JEQ15_04775 PF13380 CoA binding domain JEQ15_04775 PF13607 Succinyl-CoA ligase like flavodoxin domain JEQ15_04780 PF03942 DTW domain JEQ15_04790 PF08032 RNA 2'-O ribose methyltransferase substrate binding JEQ15_04790 PF00588 SpoU rRNA Methylase family JEQ15_04795 PF07690 Major Facilitator Superfamily JEQ15_04800 PF00529 HlyD membrane-fusion protein of T1SS JEQ15_04800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JEQ15_04805 PF07729 FCD domain JEQ15_04805 PF00392 Bacterial regulatory proteins, gntR family JEQ15_04815 PF00857 Isochorismatase family JEQ15_04820 PF01047 MarR family JEQ15_04825 PF07690 Major Facilitator Superfamily JEQ15_04830 PF07715 TonB-dependent Receptor Plug Domain JEQ15_04830 PF00593 TonB dependent receptor JEQ15_04835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JEQ15_04840 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_04845 PF00005 ABC transporter JEQ15_04845 PF00571 CBS domain JEQ15_04850 PF00268 Ribonucleotide reductase, small chain JEQ15_04855 PF02867 Ribonucleotide reductase, barrel domain JEQ15_04855 PF00317 Ribonucleotide reductase, all-alpha domain JEQ15_04855 PF08343 Ribonucleotide reductase N-terminal JEQ15_04860 PF07972 NrdI Flavodoxin like JEQ15_04870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JEQ15_04870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JEQ15_04875 PF00313 'Cold-shock' DNA-binding domain JEQ15_04885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JEQ15_04890 PF04055 Radical SAM superfamily JEQ15_04890 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JEQ15_04900 PF04359 Protein of unknown function (DUF493) JEQ15_04905 PF07943 Penicillin-binding protein 5, C-terminal domain JEQ15_04905 PF00768 D-alanyl-D-alanine carboxypeptidase JEQ15_04910 PF05036 Sporulation related domain JEQ15_04910 PF03330 Lytic transglycolase JEQ15_04915 PF01098 Cell cycle protein JEQ15_04920 PF00905 Penicillin binding protein transpeptidase domain JEQ15_04920 PF03717 Penicillin-binding Protein dimerisation domain JEQ15_04925 PF02590 Predicted SPOUT methyltransferase JEQ15_04940 PF01467 Cytidylyltransferase-like JEQ15_04945 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JEQ15_04945 PF06144 DNA polymerase III, delta subunit JEQ15_04950 PF04390 Lipopolysaccharide-assembly JEQ15_04955 PF08264 Anticodon-binding domain of tRNA JEQ15_04955 PF00133 tRNA synthetases class I (I, L, M and V) JEQ15_04955 PF13603 Leucyl-tRNA synthetase, Domain 2 JEQ15_04960 PF00005 ABC transporter JEQ15_04965 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_04970 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_04975 PF00497 Bacterial extracellular solute-binding proteins, family 3 JEQ15_04995 PF00578 AhpC/TSA family JEQ15_05005 PF00795 Carbon-nitrogen hydrolase JEQ15_05010 PF00571 CBS domain JEQ15_05010 PF03471 Transporter associated domain JEQ15_05015 PF02130 Uncharacterized protein family UPF0054 JEQ15_05020 PF02562 PhoH-like protein JEQ15_05025 PF00919 Uncharacterized protein family UPF0004 JEQ15_05025 PF04055 Radical SAM superfamily JEQ15_05025 PF01938 TRAM domain JEQ15_05030 PF01494 FAD binding domain JEQ15_05035 PF00756 Putative esterase JEQ15_05040 PF08240 Alcohol dehydrogenase GroES-like domain JEQ15_05040 PF00107 Zinc-binding dehydrogenase JEQ15_05045 PF02583 Metal-sensitive transcriptional repressor JEQ15_05085 PF01047 MarR family JEQ15_05085 PF00480 ROK family JEQ15_05090 PF01979 Amidohydrolase family JEQ15_05095 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JEQ15_05100 PF02378 Phosphotransferase system, EIIC JEQ15_05100 PF00367 phosphotransferase system, EIIB JEQ15_05100 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JEQ15_05105 PF00589 Phage integrase family JEQ15_05105 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain JEQ15_05140 PF03837 RecT family JEQ15_05145 PF12684 PDDEXK-like domain of unknown function (DUF3799) JEQ15_05145 PF06630 Enterobacterial exodeoxyribonuclease VIII JEQ15_05200 PF01381 Helix-turn-helix JEQ15_05200 PF00717 Peptidase S24-like JEQ15_05225 PF00772 DnaB-like helicase N terminal domain JEQ15_05225 PF03796 DnaB-like helicase C terminal domain JEQ15_05250 PF07102 Protein of unknown function (DUF1364) JEQ15_05265 PF07274 Protein of unknown function (DUF1440) JEQ15_05280 PF00959 Phage lysozyme JEQ15_05340 PF02369 Bacterial Ig-like domain (group 1) JEQ15_05340 PF02368 Bacterial Ig-like domain (group 2) JEQ15_05340 PF07979 Intimin C-type lectin domain JEQ15_05340 PF01476 LysM domain JEQ15_05340 PF11924 Inverse autotransporter, beta-domain JEQ15_05515 PF13953 PapC C-terminal domain JEQ15_05515 PF13954 PapC N-terminal domain JEQ15_05515 PF00577 Outer membrane usher protein JEQ15_05520 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_05520 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_05525 PF16970 Type-1 fimbrial protein, A JEQ15_05530 PF06440 DNA polymerase III, theta subunit JEQ15_05535 PF00749 tRNA synthetases class I (E and Q), catalytic domain JEQ15_05535 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JEQ15_05540 PF03573 outer membrane porin, OprD family JEQ15_05550 PF01475 Ferric uptake regulator family JEQ15_05555 PF00258 Flavodoxin JEQ15_05560 PF01402 Ribbon-helix-helix protein, copG family JEQ15_05565 PF12697 Alpha/beta hydrolase family JEQ15_05570 PF03925 SeqA protein C-terminal domain JEQ15_05570 PF17206 SeqA protein N-terminal domain JEQ15_05575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JEQ15_05575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JEQ15_05575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JEQ15_05575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JEQ15_05580 PF07308 Protein of unknown function (DUF1456) JEQ15_05585 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH JEQ15_05600 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system JEQ15_05610 PF10725 Protein of unknown function (DUF2517) JEQ15_05615 PF01784 NIF3 (NGG1p interacting factor 3) JEQ15_05625 PF05762 VWA domain containing CoxE-like protein JEQ15_05635 PF07728 AAA domain (dynein-related subfamily) JEQ15_05645 PF07690 Major Facilitator Superfamily JEQ15_05655 PF00285 Citrate synthase, C-terminal domain JEQ15_05660 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JEQ15_05665 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JEQ15_05670 PF02910 Fumarate reductase flavoprotein C-term JEQ15_05670 PF00890 FAD binding domain JEQ15_05675 PF13085 2Fe-2S iron-sulfur cluster binding domain JEQ15_05680 PF16078 2-oxoglutarate dehydrogenase N-terminus JEQ15_05680 PF16870 2-oxoglutarate dehydrogenase C-terminal JEQ15_05680 PF02779 Transketolase, pyrimidine binding domain JEQ15_05680 PF00676 Dehydrogenase E1 component JEQ15_05685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JEQ15_05685 PF00364 Biotin-requiring enzyme JEQ15_05685 PF02817 e3 binding domain JEQ15_05690 PF00549 CoA-ligase JEQ15_05690 PF08442 ATP-grasp domain JEQ15_05695 PF00549 CoA-ligase JEQ15_05695 PF02629 CoA binding domain JEQ15_05700 PF01654 Cytochrome bd terminal oxidase subunit I JEQ15_05705 PF02322 Cytochrome bd terminal oxidase subunit II JEQ15_05710 PF08173 Membrane bound YbgT-like protein JEQ15_05715 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) JEQ15_05720 PF03466 LysR substrate binding domain JEQ15_05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_05725 PF07690 Major Facilitator Superfamily JEQ15_05735 PF03061 Thioesterase superfamily JEQ15_05740 PF01618 MotA/TolQ/ExbB proton channel family JEQ15_05745 PF02472 Biopolymer transport protein ExbD/TolR JEQ15_05750 PF06519 TolA C-terminal JEQ15_05755 PF07676 WD40-like Beta Propeller Repeat JEQ15_05755 PF04052 TolB amino-terminal domain JEQ15_05760 PF00691 OmpA family JEQ15_05765 PF13174 Tetratricopeptide repeat JEQ15_05765 PF16331 TolA binding protein trimerisation JEQ15_05785 PF04973 Nicotinamide mononucleotide transporter JEQ15_05790 PF00793 DAHP synthetase I family JEQ15_05795 PF00300 Histidine phosphatase superfamily (branch 1) JEQ15_05800 PF00005 ABC transporter JEQ15_05805 PF08479 POTRA domain, ShlB-type JEQ15_05805 PF17287 POTRA domain JEQ15_05805 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JEQ15_05810 PF05860 haemagglutination activity domain JEQ15_05810 PF14436 Bacterial EndoU nuclease JEQ15_05810 PF05594 Haemagluttinin repeat JEQ15_05810 PF13332 Hemagglutinin repeat JEQ15_05810 PF04829 Pre-toxin domain with VENN motif JEQ15_05835 PF03459 TOBE domain JEQ15_05835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_05840 PF10766 Multidrug efflux pump-associated protein AcrZ JEQ15_05850 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_05855 PF00005 ABC transporter JEQ15_05855 PF03459 TOBE domain JEQ15_05865 PF10282 Lactonase, 7-bladed beta-propeller JEQ15_05870 PF00202 Aminotransferase class-III JEQ15_05875 PF06968 Biotin and Thiamin Synthesis associated domain JEQ15_05875 PF04055 Radical SAM superfamily JEQ15_05880 PF00155 Aminotransferase class I and II JEQ15_05885 PF08241 Methyltransferase domain JEQ15_05895 PF00271 Helicase conserved C-terminal domain JEQ15_05895 PF12344 Ultra-violet resistance protein B JEQ15_05895 PF17757 UvrB interaction domain JEQ15_05895 PF04851 Type III restriction enzyme, res subunit JEQ15_05895 PF02151 UvrB/uvrC motif JEQ15_05905 PF01933 Uncharacterised protein family UPF0052 JEQ15_05910 PF04055 Radical SAM superfamily JEQ15_05910 PF06463 Molybdenum Cofactor Synthesis C JEQ15_05915 PF01967 MoaC family JEQ15_05920 PF02597 ThiS family JEQ15_05925 PF02391 MoaE protein JEQ15_05930 PF01027 Inhibitor of apoptosis-promoting Bax1 JEQ15_05945 PF00005 ABC transporter JEQ15_05950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JEQ15_05955 PF09209 Tetracyclin repressor-like, C-terminal domain JEQ15_05955 PF00440 Bacterial regulatory proteins, tetR family JEQ15_05960 PF00270 DEAD/DEAH box helicase JEQ15_05960 PF00271 Helicase conserved C-terminal domain JEQ15_05965 PF01207 Dihydrouridine synthase (Dus) JEQ15_05970 PF04226 Transglycosylase associated protein JEQ15_05975 PF00581 Rhodanese-like domain JEQ15_05985 PF03606 C4-dicarboxylate anaerobic carrier JEQ15_05990 PF01053 Cys/Met metabolism PLP-dependent enzyme JEQ15_05995 PF00206 Lyase JEQ15_05995 PF10397 Adenylosuccinate lyase C-terminus JEQ15_06000 PF03972 MmgE/PrpD family JEQ15_06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_06005 PF03466 LysR substrate binding domain JEQ15_06010 PF06733 DEAD_2 JEQ15_06010 PF13307 Helicase C-terminal domain JEQ15_06015 PF00210 Ferritin-like domain JEQ15_06020 PF00892 EamA-like transporter family JEQ15_06025 PF03641 Possible lysine decarboxylase JEQ15_06035 PF07969 Amidohydrolase family JEQ15_06040 PF00899 ThiF family JEQ15_06045 PF00994 Probable molybdopterin binding domain JEQ15_06045 PF03454 MoeA C-terminal region (domain IV) JEQ15_06045 PF03453 MoeA N-terminal region (domain I and II) JEQ15_06050 PF06779 Uncharacterised MFS-type transporter YbfB JEQ15_06055 PF01227 GTP cyclohydrolase I JEQ15_06060 PF04235 Protein of unknown function (DUF418) JEQ15_06065 PF02698 DUF218 domain JEQ15_06070 PF00390 Malic enzyme, N-terminal domain JEQ15_06070 PF03949 Malic enzyme, NAD binding domain JEQ15_06075 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JEQ15_06075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JEQ15_06080 PF04172 LrgB-like family JEQ15_06085 PF03788 LrgA family JEQ15_06090 PF09334 tRNA synthetases class I (M) JEQ15_06090 PF01588 Putative tRNA binding domain JEQ15_06095 PF10609 NUBPL iron-transfer P-loop NTPase JEQ15_06100 PF00485 Phosphoribulokinase / Uridine kinase family JEQ15_06105 PF00692 dUTPase JEQ15_06110 PF05170 AsmA family JEQ15_06115 PF03606 C4-dicarboxylate anaerobic carrier JEQ15_06120 PF00571 CBS domain JEQ15_06120 PF03471 Transporter associated domain JEQ15_06120 PF03741 Integral membrane protein TerC family JEQ15_06125 PF01797 Transposase IS200 like JEQ15_06130 PF01385 Probable transposase JEQ15_06130 PF12323 Helix-turn-helix domain JEQ15_06130 PF07282 Putative transposase DNA-binding domain JEQ15_06135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JEQ15_06135 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JEQ15_06140 PF04073 Aminoacyl-tRNA editing domain JEQ15_06145 PF00465 Iron-containing alcohol dehydrogenase JEQ15_06150 PF01502 Phosphoribosyl-AMP cyclohydrolase JEQ15_06150 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JEQ15_06155 PF00977 Histidine biosynthesis protein JEQ15_06160 PF00977 Histidine biosynthesis protein JEQ15_06165 PF00117 Glutamine amidotransferase class-I JEQ15_06170 PF00475 Imidazoleglycerol-phosphate dehydratase JEQ15_06175 PF00155 Aminotransferase class I and II JEQ15_06180 PF00815 Histidinol dehydrogenase JEQ15_06185 PF01634 ATP phosphoribosyltransferase JEQ15_06185 PF08029 HisG, C-terminal domain JEQ15_06190 PF01370 NAD dependent epimerase/dehydratase family JEQ15_06195 PF13417 Glutathione S-transferase, N-terminal domain JEQ15_06195 PF00043 Glutathione S-transferase, C-terminal domain JEQ15_06200 PF07943 Penicillin-binding protein 5, C-terminal domain JEQ15_06200 PF00768 D-alanyl-D-alanine carboxypeptidase JEQ15_06205 PF01268 Formate--tetrahydrofolate ligase JEQ15_06210 PF03313 Serine dehydratase alpha chain JEQ15_06210 PF03315 Serine dehydratase beta chain JEQ15_06220 PF01569 PAP2 superfamily JEQ15_06225 PF01894 Uncharacterised protein family UPF0047 JEQ15_06230 PF00462 Glutaredoxin JEQ15_06235 PF07214 Protein of unknown function (DUF1418) JEQ15_06240 PF10722 Putative bacterial sensory transduction regulator JEQ15_06245 PF05958 tRNA (Uracil-5-)-methyltransferase JEQ15_06250 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_06255 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_06260 PF00497 Bacterial extracellular solute-binding proteins, family 3 JEQ15_06265 PF00005 ABC transporter JEQ15_06270 PF11066 Protein of unknown function (DUF2867) JEQ15_06270 PF13460 NAD(P)H-binding JEQ15_06275 PF03956 Lysine exporter LysO JEQ15_06280 PF11398 Protein of unknown function (DUF2813) JEQ15_06285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JEQ15_06290 PF00005 ABC transporter JEQ15_06290 PF02687 FtsX-like permease family JEQ15_06290 PF12704 MacB-like periplasmic core domain JEQ15_06295 PF00313 'Cold-shock' DNA-binding domain JEQ15_06300 PF02617 ATP-dependent Clp protease adaptor protein ClpS JEQ15_06305 PF00004 ATPase family associated with various cellular activities (AAA) JEQ15_06305 PF07724 AAA domain (Cdc48 subfamily) JEQ15_06305 PF17871 AAA lid domain JEQ15_06305 PF10431 C-terminal, D2-small domain, of ClpB protein JEQ15_06305 PF02861 Clp amino terminal domain, pathogenicity island component JEQ15_06310 PF01176 Translation initiation factor 1A / IF-1 JEQ15_06315 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JEQ15_06320 PF00005 ABC transporter JEQ15_06320 PF00664 ABC transporter transmembrane region JEQ15_06325 PF00664 ABC transporter transmembrane region JEQ15_06325 PF00005 ABC transporter JEQ15_06330 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_06335 PF01037 Lrp/AsnC ligand binding domain JEQ15_06340 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JEQ15_06340 PF09397 Ftsk gamma domain JEQ15_06340 PF17854 FtsK alpha domain JEQ15_06340 PF01580 FtsK/SpoIIIE family JEQ15_06345 PF03548 Outer membrane lipoprotein carrier protein LolA JEQ15_06350 PF00004 ATPase family associated with various cellular activities (AAA) JEQ15_06350 PF16193 AAA C-terminal domain JEQ15_06350 PF12002 MgsA AAA+ ATPase C terminal JEQ15_06355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JEQ15_06355 PF02403 Seryl-tRNA synthetase N-terminal domain JEQ15_06365 PF02615 Malate/L-lactate dehydrogenase JEQ15_06375 PF04055 Radical SAM superfamily JEQ15_06380 PF01228 Glycine radical JEQ15_06380 PF02901 Pyruvate formate lyase-like JEQ15_06385 PF01226 Formate/nitrite transporter JEQ15_06390 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JEQ15_06390 PF18381 YcaO cyclodehydratase C-terminal domain JEQ15_06395 PF17763 Glutaminase/Asparaginase C-terminal domain JEQ15_06395 PF00710 Asparaginase, N-terminal JEQ15_06405 PF07690 Major Facilitator Superfamily JEQ15_06410 PF00266 Aminotransferase class-V JEQ15_06415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JEQ15_06420 PF02224 Cytidylate kinase JEQ15_06425 PF00575 S1 RNA binding domain JEQ15_06430 PF00216 Bacterial DNA-binding protein JEQ15_06440 PF03772 Competence protein JEQ15_06440 PF00753 Metallo-beta-lactamase superfamily JEQ15_06445 PF00005 ABC transporter JEQ15_06445 PF00664 ABC transporter transmembrane region JEQ15_06450 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JEQ15_06455 PF00313 'Cold-shock' DNA-binding domain JEQ15_06460 PF03966 Trm112p-like protein JEQ15_06465 PF02348 Cytidylyltransferase JEQ15_06470 PF02698 DUF218 domain JEQ15_06475 PF13847 Methyltransferase domain JEQ15_06480 PF17192 MukF middle domain JEQ15_06480 PF03882 MukF winged-helix domain JEQ15_06480 PF17193 MukF C-terminal domain JEQ15_06485 PF04288 MukE-like family JEQ15_06490 PF04310 MukB N-terminal JEQ15_06490 PF16330 MukB hinge domain JEQ15_06495 PF00302 Chloramphenicol acetyltransferase JEQ15_06500 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JEQ15_06505 PF03734 L,D-transpeptidase catalytic domain JEQ15_06505 PF01471 Putative peptidoglycan binding domain JEQ15_06510 PF05951 Bacterial protein of unknown function (DUF882) JEQ15_06515 PF00753 Metallo-beta-lactamase superfamily JEQ15_06520 PF05638 Type VI secretion system effector, Hcp JEQ15_06525 PF05947 Type VI secretion system, TssF JEQ15_06535 PF06761 Intracellular multiplication and human macrophage-killing JEQ15_06535 PF14331 ImcF-related N-terminal domain JEQ15_06535 PF06744 Type VI secretion protein IcmF C-terminal JEQ15_06555 PF07724 AAA domain (Cdc48 subfamily) JEQ15_06555 PF17871 AAA lid domain JEQ15_06555 PF10431 C-terminal, D2-small domain, of ClpB protein JEQ15_06555 PF00004 ATPase family associated with various cellular activities (AAA) JEQ15_06565 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JEQ15_06595 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JEQ15_06605 PF05638 Type VI secretion system effector, Hcp JEQ15_06610 PF04717 Type VI secretion system, phage-baseplate injector JEQ15_06685 PF05593 RHS Repeat JEQ15_06685 PF03527 RHS protein JEQ15_06730 PF03527 RHS protein JEQ15_06730 PF05593 RHS Repeat JEQ15_06750 PF00155 Aminotransferase class I and II JEQ15_06755 PF00267 Gram-negative porin JEQ15_06760 PF00152 tRNA synthetases class II (D, K and N) JEQ15_06760 PF01336 OB-fold nucleic acid binding domain JEQ15_06770 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JEQ15_06770 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JEQ15_06775 PF11940 Domain of unknown function (DUF3458) Ig-like fold JEQ15_06775 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JEQ15_06775 PF01433 Peptidase family M1 domain JEQ15_06785 PF01180 Dihydroorotate dehydrogenase JEQ15_06790 PF07126 Cell-division protein ZapC JEQ15_06795 PF03476 MOSC N-terminal beta barrel domain JEQ15_06795 PF03473 MOSC domain JEQ15_06795 PF00111 2Fe-2S iron-sulfur cluster binding domain JEQ15_06800 PF10672 S-adenosylmethionine-dependent methyltransferase JEQ15_06800 PF02926 THUMP domain JEQ15_06800 PF01170 Putative RNA methylase family UPF0020 JEQ15_06805 PF00005 ABC transporter JEQ15_06805 PF16326 ABC transporter C-terminal domain JEQ15_06805 PF12848 ABC transporter JEQ15_06810 PF04403 Paraquat-inducible protein A JEQ15_06815 PF02470 MlaD protein JEQ15_06820 PF03886 ABC-type transport auxiliary lipoprotein component JEQ15_06830 PF04957 Ribosome modulation factor JEQ15_06835 PF07977 FabA-like domain JEQ15_06840 PF13654 AAA domain JEQ15_06840 PF05362 Lon protease (S16) C-terminal proteolytic domain JEQ15_06845 PF06303 MatP N-terminal domain JEQ15_06845 PF17414 MatP C-terminal ribbon-helix-helix domain JEQ15_06850 PF00691 OmpA family JEQ15_06850 PF01389 OmpA-like transmembrane domain JEQ15_06855 PF03846 Cell division inhibitor SulA JEQ15_06860 PF04994 TfoX C-terminal domain JEQ15_06860 PF04993 TfoX N-terminal domain JEQ15_06865 PF12805 FUSC-like inner membrane protein yccS JEQ15_06870 PF12462 DNA helicase IV / RNA helicase N terminal JEQ15_06870 PF00580 UvrD/REP helicase N-terminal domain JEQ15_06870 PF13361 UvrD-like helicase C-terminal domain JEQ15_06875 PF02142 MGS-like domain JEQ15_06880 PF13380 CoA binding domain JEQ15_06885 PF08755 Hemimethylated DNA-binding protein YccV like JEQ15_06890 PF00708 Acylphosphatase JEQ15_06895 PF04358 DsrC like protein JEQ15_06905 PF00583 Acetyltransferase (GNAT) family JEQ15_06915 PF09313 Domain of unknown function (DUF1971) JEQ15_06920 PF00226 DnaJ domain JEQ15_06920 PF01556 DnaJ C terminal domain JEQ15_06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_06930 PF03466 LysR substrate binding domain JEQ15_06935 PF00248 Aldo/keto reductase family JEQ15_06940 PF03577 Peptidase family C69 JEQ15_06945 PF06445 GyrI-like small molecule binding domain JEQ15_06945 PF12833 Helix-turn-helix domain JEQ15_06960 PF00313 'Cold-shock' DNA-binding domain JEQ15_06965 PF03279 Bacterial lipid A biosynthesis acyltransferase JEQ15_06990 PF13847 Methyltransferase domain JEQ15_07040 PF00884 Sulfatase JEQ15_07040 PF11893 Domain of unknown function (DUF3413) JEQ15_07045 PF07208 Protein of unknown function (DUF1414) JEQ15_07050 PF04245 37-kD nucleoid-associated bacterial protein JEQ15_07055 PF01386 Ribosomal L25p family JEQ15_07060 PF00271 Helicase conserved C-terminal domain JEQ15_07060 PF04851 Type III restriction enzyme, res subunit JEQ15_07065 PF00849 RNA pseudouridylate synthase JEQ15_07065 PF01479 S4 domain JEQ15_07070 PF07690 Major Facilitator Superfamily JEQ15_07080 PF00877 NlpC/P60 family JEQ15_07085 PF01569 PAP2 superfamily JEQ15_07100 PF08207 Elongation factor P (EF-P) KOW-like domain JEQ15_07100 PF09285 Elongation factor P, C-terminal JEQ15_07100 PF01132 Elongation factor P (EF-P) OB domain JEQ15_07105 PF03222 Tryptophan/tyrosine permease family JEQ15_07110 PF00293 NUDIX domain JEQ15_07115 PF01261 Xylose isomerase-like TIM barrel JEQ15_07120 PF03601 Conserved hypothetical protein 698 JEQ15_07125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_07125 PF03466 LysR substrate binding domain JEQ15_07130 PF00324 Amino acid permease JEQ15_07135 PF00593 TonB dependent receptor JEQ15_07135 PF07715 TonB-dependent Receptor Plug Domain JEQ15_07140 PF13520 Amino acid permease JEQ15_07145 PF00082 Subtilase family JEQ15_07145 PF03797 Autotransporter beta-domain JEQ15_07145 PF12951 Passenger-associated-transport-repeat JEQ15_07150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JEQ15_07150 PF00205 Thiamine pyrophosphate enzyme, central domain JEQ15_07150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JEQ15_07155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_07155 PF03466 LysR substrate binding domain JEQ15_07160 PF01565 FAD binding domain JEQ15_07160 PF09330 D-lactate dehydrogenase, membrane binding JEQ15_07165 PF00929 Exonuclease JEQ15_07165 PF08411 Exonuclease C-terminal JEQ15_07170 PF01306 LacY proton/sugar symporter JEQ15_07175 PF04363 Protein of unknown function (DUF496) JEQ15_07180 PF10150 Ribonuclease E/G family JEQ15_07180 PF00575 S1 RNA binding domain JEQ15_07180 PF12111 Polyribonucleotide phosphorylase C terminal JEQ15_07185 PF01479 S4 domain JEQ15_07185 PF00849 RNA pseudouridylate synthase JEQ15_07195 PF02545 Maf-like protein JEQ15_07200 PF02620 Large ribosomal RNA subunit accumulation protein YceD JEQ15_07205 PF01783 Ribosomal L32p protein family JEQ15_07210 PF02504 Fatty acid synthesis protein JEQ15_07215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JEQ15_07215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JEQ15_07220 PF00698 Acyl transferase domain JEQ15_07230 PF00550 Phosphopantetheine attachment site JEQ15_07235 PF02801 Beta-ketoacyl synthase, C-terminal domain JEQ15_07235 PF00109 Beta-ketoacyl synthase, N-terminal domain JEQ15_07240 PF01063 Amino-transferase class IV JEQ15_07245 PF02618 YceG-like family JEQ15_07250 PF02223 Thymidylate kinase JEQ15_07255 PF09115 DNA polymerase III, delta subunit, C terminal JEQ15_07260 PF01026 TatD related DNase JEQ15_07265 PF01230 HIT domain JEQ15_07270 PF07233 Protein of unknown function (DUF1425) JEQ15_07275 PF13036 Peptidoglycan-synthase activator LpoB JEQ15_07285 PF00933 Glycosyl hydrolase family 3 N terminal domain JEQ15_07290 PF05728 Uncharacterised protein family (UPF0227) JEQ15_07295 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_07300 PF05433 Glycine zipper 2TM domain JEQ15_07305 PF00270 DEAD/DEAH box helicase JEQ15_07305 PF02559 CarD-like/TRCF domain JEQ15_07305 PF00271 Helicase conserved C-terminal domain JEQ15_07305 PF03461 TRCF domain JEQ15_07305 PF17757 UvrB interaction domain JEQ15_07310 PF02687 FtsX-like permease family JEQ15_07310 PF12704 MacB-like periplasmic core domain JEQ15_07315 PF00005 ABC transporter JEQ15_07320 PF02687 FtsX-like permease family JEQ15_07320 PF12704 MacB-like periplasmic core domain JEQ15_07325 PF02146 Sir2 family JEQ15_07330 PF07687 Peptidase dimerisation domain JEQ15_07330 PF01546 Peptidase family M20/M25/M40 JEQ15_07335 PF08007 Cupin superfamily protein JEQ15_07340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_07340 PF08918 PhoQ Sensor JEQ15_07345 PF00072 Response regulator receiver domain JEQ15_07345 PF00486 Transcriptional regulatory protein, C terminal JEQ15_07350 PF08328 Adenylosuccinate lyase C-terminal JEQ15_07350 PF00206 Lyase JEQ15_07355 PF04356 Protein of unknown function (DUF489) JEQ15_07365 PF00293 NUDIX domain JEQ15_07370 PF00849 RNA pseudouridylate synthase JEQ15_07375 PF00180 Isocitrate/isopropylmalate dehydrogenase JEQ15_07400 PF00180 Isocitrate/isopropylmalate dehydrogenase JEQ15_07405 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain JEQ15_07405 PF00589 Phage integrase family JEQ15_07410 PF07825 Excisionase-like protein JEQ15_07425 PF06530 Phage antitermination protein Q JEQ15_07440 PF13693 Winged helix-turn-helix DNA-binding JEQ15_07450 PF01555 DNA methylase JEQ15_07470 PF00959 Phage lysozyme JEQ15_07520 PF00574 Clp protease JEQ15_07635 PF00180 Isocitrate/isopropylmalate dehydrogenase JEQ15_07665 PF00180 Isocitrate/isopropylmalate dehydrogenase JEQ15_07680 PF00313 'Cold-shock' DNA-binding domain JEQ15_07685 PF00011 Hsp20/alpha crystallin family JEQ15_07695 PF01638 HxlR-like helix-turn-helix JEQ15_07700 PF05368 NmrA-like family JEQ15_07710 PF00485 Phosphoribulokinase / Uridine kinase family JEQ15_07720 PF02195 ParB-like nuclease domain JEQ15_07725 PF01507 Phosphoadenosine phosphosulfate reductase family JEQ15_07725 PF11922 Domain of unknown function (DUF3440) JEQ15_07730 PF08242 Methyltransferase domain JEQ15_07745 PF08349 Protein of unknown function (DUF1722) JEQ15_07755 PF04325 Protein of unknown function (DUF465) JEQ15_07785 PF00557 Metallopeptidase family M24 JEQ15_07790 PF06530 Phage antitermination protein Q JEQ15_07795 PF00561 alpha/beta hydrolase fold JEQ15_07800 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JEQ15_07805 PF02811 PHP domain JEQ15_07820 PF00582 Universal stress protein family JEQ15_07825 PF00210 Ferritin-like domain JEQ15_07830 PF04234 CopC domain JEQ15_07835 PF05425 Copper resistance protein D JEQ15_07840 PF10709 Protein of unknown function (DUF2511) JEQ15_07850 PF02470 MlaD protein JEQ15_07855 PF04403 Paraquat-inducible protein A JEQ15_07860 PF13185 GAF domain JEQ15_07865 PF04352 ProQ/FINO family JEQ15_07865 PF17516 ProQ C-terminal domain JEQ15_07870 PF00595 PDZ domain JEQ15_07870 PF11818 C-terminal domain of tail specific protease (DUF3340) JEQ15_07870 PF17804 Tail specific protease N-terminal domain JEQ15_07870 PF03572 Peptidase family S41 JEQ15_07880 PF01435 Peptidase family M48 JEQ15_07890 PF00375 Sodium:dicarboxylate symporter family JEQ15_07895 PF04307 LexA-binding, inner membrane-associated putative hydrolase JEQ15_07900 PF13419 Haloacid dehalogenase-like hydrolase JEQ15_07905 PF14002 YniB-like protein JEQ15_07910 PF03881 Fructosamine kinase JEQ15_07915 PF00950 ABC 3 transport family JEQ15_07920 PF00950 ABC 3 transport family JEQ15_07925 PF00005 ABC transporter JEQ15_07930 PF01297 Zinc-uptake complex component A periplasmic JEQ15_07935 PF01464 Transglycosylase SLT domain JEQ15_07940 PF01914 MarC family integral membrane protein JEQ15_07950 PF01588 Putative tRNA binding domain JEQ15_07960 PF09160 FimH, mannose binding JEQ15_07965 PF03129 Anticodon binding domain JEQ15_07965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JEQ15_07965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JEQ15_07965 PF02824 TGS domain JEQ15_07970 PF00707 Translation initiation factor IF-3, C-terminal domain JEQ15_07970 PF05198 Translation initiation factor IF-3, N-terminal domain JEQ15_07975 PF01632 Ribosomal protein L35 JEQ15_07980 PF00453 Ribosomal protein L20 JEQ15_07990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JEQ15_07990 PF01409 tRNA synthetases class II core domain (F) JEQ15_07995 PF03483 B3/4 domain JEQ15_07995 PF03484 tRNA synthetase B5 domain JEQ15_07995 PF03147 Ferredoxin-fold anticodon binding domain JEQ15_07995 PF01588 Putative tRNA binding domain JEQ15_07995 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JEQ15_08000 PF00216 Bacterial DNA-binding protein JEQ15_08005 PF01032 FecCD transport family JEQ15_08010 PF00005 ABC transporter JEQ15_08015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JEQ15_08020 PF00535 Glycosyl transferase family 2 JEQ15_08025 PF01370 NAD dependent epimerase/dehydratase family JEQ15_08025 PF02911 Formyl transferase, C-terminal domain JEQ15_08025 PF00551 Formyl transferase JEQ15_08030 PF01522 Polysaccharide deacetylase JEQ15_08035 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JEQ15_08040 PF00892 EamA-like transporter family JEQ15_08045 PF00892 EamA-like transporter family JEQ15_08050 PF00877 NlpC/P60 family JEQ15_08055 PF10437 Bacterial lipoate protein ligase C-terminus JEQ15_08055 PF03099 Biotin/lipoate A/B protein ligase family JEQ15_08060 PF12833 Helix-turn-helix domain JEQ15_08065 PF01266 FAD dependent oxidoreductase JEQ15_08070 PF00392 Bacterial regulatory proteins, gntR family JEQ15_08070 PF07729 FCD domain JEQ15_08085 PF09335 SNARE associated Golgi protein JEQ15_08090 PF00205 Thiamine pyrophosphate enzyme, central domain JEQ15_08090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JEQ15_08090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JEQ15_08095 PF03306 Alpha-acetolactate decarboxylase JEQ15_08110 PF13954 PapC N-terminal domain JEQ15_08110 PF00577 Outer membrane usher protein JEQ15_08115 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_08115 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_08145 PF03527 RHS protein JEQ15_08160 PF06071 Protein of unknown function (DUF933) JEQ15_08160 PF01926 50S ribosome-binding GTPase JEQ15_08165 PF01195 Peptidyl-tRNA hydrolase JEQ15_08170 PF10762 Protein of unknown function (DUF2583) JEQ15_08175 PF14572 Phosphoribosyl synthetase-associated domain JEQ15_08175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JEQ15_08180 PF00288 GHMP kinases N terminal domain JEQ15_08180 PF08544 GHMP kinases C terminal JEQ15_08185 PF03550 Outer membrane lipoprotein LolB JEQ15_08190 PF01488 Shikimate / quinate 5-dehydrogenase JEQ15_08190 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JEQ15_08190 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JEQ15_08195 PF03462 PCRF domain JEQ15_08195 PF00472 RF-1 domain JEQ15_08200 PF17827 PrmC N-terminal domain JEQ15_08200 PF13847 Methyltransferase domain JEQ15_08205 PF13369 Transglutaminase-like superfamily JEQ15_08210 PF00793 DAHP synthetase I family JEQ15_08215 PF16199 Radical_SAM C-terminal domain JEQ15_08215 PF04055 Radical SAM superfamily JEQ15_08230 PF01740 STAS domain JEQ15_08230 PF00916 Sulfate permease family JEQ15_08240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JEQ15_08255 PF02613 Nitrate reductase delta subunit JEQ15_08265 PF07690 Major Facilitator Superfamily JEQ15_08270 PF13302 Acetyltransferase (GNAT) domain JEQ15_08275 PF03023 Lipid II flippase MurJ JEQ15_08285 PF05746 DALR anticodon binding domain JEQ15_08285 PF03485 Arginyl tRNA synthetase N terminal domain JEQ15_08285 PF00750 tRNA synthetases class I (R) JEQ15_08290 PF06185 YecM protein JEQ15_08295 PF03932 CutC family JEQ15_08305 PF00005 ABC transporter JEQ15_08305 PF16326 ABC transporter C-terminal domain JEQ15_08305 PF12848 ABC transporter JEQ15_08310 PF08003 Protein of unknown function (DUF1698) JEQ15_08315 PF13649 Methyltransferase domain JEQ15_08320 PF01124 MAPEG family JEQ15_08325 PF01336 OB-fold nucleic acid binding domain JEQ15_08325 PF00152 tRNA synthetases class II (D, K and N) JEQ15_08325 PF02938 GAD domain JEQ15_08330 PF00293 NUDIX domain JEQ15_08335 PF01709 Transcriptional regulator JEQ15_08340 PF02075 Crossover junction endodeoxyribonuclease RuvC JEQ15_08345 PF07499 RuvA, C-terminal domain JEQ15_08345 PF01330 RuvA N terminal domain JEQ15_08350 PF17864 RuvB AAA lid domain JEQ15_08350 PF05496 Holliday junction DNA helicase RuvB P-loop domain JEQ15_08350 PF05491 RuvB C-terminal winged helix domain JEQ15_08355 PF05638 Type VI secretion system effector, Hcp JEQ15_08370 PF05593 RHS Repeat JEQ15_08370 PF03527 RHS protein JEQ15_08395 PF00545 ribonuclease JEQ15_08405 PF13333 Integrase core domain JEQ15_08405 PF13276 HTH-like domain JEQ15_08405 PF00665 Integrase core domain JEQ15_08425 PF00950 ABC 3 transport family JEQ15_08430 PF00005 ABC transporter JEQ15_08435 PF01297 Zinc-uptake complex component A periplasmic JEQ15_08440 PF01476 LysM domain JEQ15_08440 PF01551 Peptidase family M23 JEQ15_08440 PF08525 Opacity-associated protein A N-terminal motif JEQ15_08445 PF03279 Bacterial lipid A biosynthesis acyltransferase JEQ15_08450 PF00224 Pyruvate kinase, barrel domain JEQ15_08450 PF02887 Pyruvate kinase, alpha/beta domain JEQ15_08455 PF01418 Helix-turn-helix domain, rpiR family JEQ15_08455 PF01380 SIS domain JEQ15_08460 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JEQ15_08460 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JEQ15_08465 PF00893 Small Multidrug Resistance protein JEQ15_08470 PF00893 Small Multidrug Resistance protein JEQ15_08475 PF11066 Protein of unknown function (DUF2867) JEQ15_08475 PF13460 NAD(P)H-binding JEQ15_08480 PF01042 Endoribonuclease L-PSP JEQ15_08485 PF13307 Helicase C-terminal domain JEQ15_08485 PF04851 Type III restriction enzyme, res subunit JEQ15_08490 PF00814 Glycoprotease family JEQ15_08495 PF03843 Outer membrane lipoprotein Slp family JEQ15_08500 PF13193 AMP-binding enzyme C-terminal domain JEQ15_08500 PF00501 AMP-binding enzyme JEQ15_08505 PF00570 HRDC domain JEQ15_08505 PF01612 3'-5' exonuclease JEQ15_08510 PF03776 Septum formation topological specificity factor MinE JEQ15_08515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JEQ15_08520 PF05209 Septum formation inhibitor MinC, N-terminal domain JEQ15_08520 PF03775 Septum formation inhibitor MinC, C-terminal domain JEQ15_08525 PF05166 YcgL domain JEQ15_08530 PF13406 Transglycosylase SLT domain JEQ15_08535 PF01557 Fumarylacetoacetate (FAA) hydrolase family JEQ15_08540 PF03692 Putative zinc- or iron-chelating domain JEQ15_08545 PF03649 Uncharacterised protein family (UPF0014) JEQ15_08550 PF00005 ABC transporter JEQ15_08560 PF12833 Helix-turn-helix domain JEQ15_08560 PF06445 GyrI-like small molecule binding domain JEQ15_08565 PF00440 Bacterial regulatory proteins, tetR family JEQ15_08570 PF00672 HAMP domain JEQ15_08570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JEQ15_08570 PF02203 Tar ligand binding domain homologue JEQ15_08575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JEQ15_08575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JEQ15_08580 PF11739 Dicarboxylate transport JEQ15_08585 PF13617 YnbE-like lipoprotein JEQ15_08590 PF07027 Protein of unknown function (DUF1318) JEQ15_08600 PF13953 PapC C-terminal domain JEQ15_08600 PF00577 Outer membrane usher protein JEQ15_08600 PF13954 PapC N-terminal domain JEQ15_08615 PF02525 Flavodoxin-like fold JEQ15_08625 PF02525 Flavodoxin-like fold JEQ15_08630 PF11898 Domain of unknown function (DUF3418) JEQ15_08630 PF00271 Helicase conserved C-terminal domain JEQ15_08630 PF00270 DEAD/DEAH box helicase JEQ15_08630 PF04408 Helicase associated domain (HA2) JEQ15_08630 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JEQ15_08645 PF13954 PapC N-terminal domain JEQ15_08645 PF00577 Outer membrane usher protein JEQ15_08645 PF13953 PapC C-terminal domain JEQ15_08650 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_08650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_08660 PF13520 Amino acid permease JEQ15_08665 PF07338 Protein of unknown function (DUF1471) JEQ15_08670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JEQ15_08670 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JEQ15_08670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JEQ15_08675 PF02233 NAD(P) transhydrogenase beta subunit JEQ15_08680 PF00582 Universal stress protein family JEQ15_08685 PF00325 Bacterial regulatory proteins, crp family JEQ15_08685 PF00027 Cyclic nucleotide-binding domain JEQ15_08690 PF00384 Molybdopterin oxidoreductase JEQ15_08690 PF01568 Molydopterin dinucleotide binding domain JEQ15_08690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JEQ15_08695 PF13247 4Fe-4S dicluster domain JEQ15_08695 PF12800 4Fe-4S binding domain JEQ15_08710 PF00550 Phosphopantetheine attachment site JEQ15_08710 PF14765 Polyketide synthase dehydratase JEQ15_08710 PF08659 KR domain JEQ15_08710 PF00698 Acyl transferase domain JEQ15_08710 PF00109 Beta-ketoacyl synthase, N-terminal domain JEQ15_08710 PF16197 Ketoacyl-synthetase C-terminal extension JEQ15_08710 PF08240 Alcohol dehydrogenase GroES-like domain JEQ15_08710 PF02801 Beta-ketoacyl synthase, C-terminal domain JEQ15_08715 PF00282 Pyridoxal-dependent decarboxylase conserved domain JEQ15_08720 PF03551 Transcriptional regulator PadR-like family JEQ15_08735 PF10417 C-terminal domain of 1-Cys peroxiredoxin JEQ15_08735 PF00578 AhpC/TSA family JEQ15_08740 PF13192 Thioredoxin domain JEQ15_08740 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_08750 PF04606 Ogr/Delta-like zinc finger JEQ15_08785 PF01048 Phosphorylase superfamily JEQ15_08785 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JEQ15_08790 PF00589 Phage integrase family JEQ15_08790 PF02899 Phage integrase, N-terminal SAM-like domain JEQ15_08795 PF01112 Asparaginase JEQ15_08800 PF13533 Biotin-lipoyl like JEQ15_08805 PF00005 ABC transporter JEQ15_08815 PF00072 Response regulator receiver domain JEQ15_08815 PF00486 Transcriptional regulatory protein, C terminal JEQ15_08820 PF13493 Domain of unknown function (DUF4118) JEQ15_08820 PF13492 GAF domain JEQ15_08820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_08820 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_08820 PF02702 Osmosensitive K+ channel His kinase sensor domain JEQ15_08825 PF02669 K+-transporting ATPase, c chain JEQ15_08835 PF03814 Potassium-transporting ATPase A subunit JEQ15_08840 PF12796 Ankyrin repeats (3 copies) JEQ15_08845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JEQ15_08850 PF02613 Nitrate reductase delta subunit JEQ15_08855 PF04976 DMSO reductase anchor subunit (DmsC) JEQ15_08860 PF13247 4Fe-4S dicluster domain JEQ15_08860 PF12800 4Fe-4S binding domain JEQ15_08865 PF01568 Molydopterin dinucleotide binding domain JEQ15_08865 PF00384 Molybdopterin oxidoreductase JEQ15_08865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JEQ15_08870 PF00455 DeoR C terminal sensor domain JEQ15_08870 PF08220 DeoR-like helix-turn-helix domain JEQ15_08875 PF03401 Tripartite tricarboxylate transporter family receptor JEQ15_08885 PF01970 Tripartite tricarboxylate transporter TctA family JEQ15_08890 PF02733 Dak1 domain JEQ15_08895 PF02734 DAK2 domain JEQ15_08900 PF00701 Dihydrodipicolinate synthetase family JEQ15_08905 PF00291 Pyridoxal-phosphate dependent enzyme JEQ15_08910 PF01042 Endoribonuclease L-PSP JEQ15_08920 PF01810 LysE type translocator JEQ15_08930 PF00730 HhH-GPD superfamily base excision DNA repair protein JEQ15_08935 PF02805 Metal binding domain of Ada JEQ15_08935 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JEQ15_08935 PF12833 Helix-turn-helix domain JEQ15_08935 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JEQ15_08940 PF04266 ASCH domain JEQ15_08945 PF00005 ABC transporter JEQ15_08945 PF12848 ABC transporter JEQ15_08950 PF07478 D-ala D-ala ligase C-terminus JEQ15_08950 PF01820 D-ala D-ala ligase N-terminus JEQ15_08955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JEQ15_08970 PF03180 NLPA lipoprotein JEQ15_08975 PF01053 Cys/Met metabolism PLP-dependent enzyme JEQ15_08990 PF07690 Major Facilitator Superfamily JEQ15_08995 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JEQ15_09000 PF03466 LysR substrate binding domain JEQ15_09000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_09005 PF07690 Major Facilitator Superfamily JEQ15_09010 PF17934 Tetracyclin repressor-like, C-terminal domain JEQ15_09010 PF00440 Bacterial regulatory proteins, tetR family JEQ15_09020 PF00005 ABC transporter JEQ15_09020 PF12848 ABC transporter JEQ15_09025 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JEQ15_09030 PF01979 Amidohydrolase family JEQ15_09035 PF03466 LysR substrate binding domain JEQ15_09035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_09040 PF07690 Major Facilitator Superfamily JEQ15_09055 PF00529 HlyD membrane-fusion protein of T1SS JEQ15_09055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JEQ15_09060 PF04632 Fusaric acid resistance protein family JEQ15_09065 PF02321 Outer membrane efflux protein JEQ15_09075 PF00012 Hsp70 protein JEQ15_09080 PF01212 Beta-eliminating lyase JEQ15_09090 PF01810 LysE type translocator JEQ15_09095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JEQ15_09095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JEQ15_09105 PF03553 Na+/H+ antiporter family JEQ15_09110 PF00155 Aminotransferase class I and II JEQ15_09115 PF12833 Helix-turn-helix domain JEQ15_09120 PF09905 DNA-binding protein VF530 JEQ15_09145 PF05638 Type VI secretion system effector, Hcp JEQ15_09165 PF05433 Glycine zipper 2TM domain JEQ15_09170 PF00106 short chain dehydrogenase JEQ15_09175 PF06932 Protein of unknown function (DUF1283) JEQ15_09190 PF00480 ROK family JEQ15_09195 PF03466 LysR substrate binding domain JEQ15_09195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_09200 PF07690 Major Facilitator Superfamily JEQ15_09205 PF05472 DNA replication terminus site-binding protein (Ter protein) JEQ15_09210 PF10415 Fumarase C C-terminus JEQ15_09210 PF00206 Lyase JEQ15_09215 PF06097 Bacterial protein of unknown function (DUF945) JEQ15_09225 PF00962 Adenosine/AMP deaminase JEQ15_09230 PF13593 SBF-like CPA transporter family (DUF4137) JEQ15_09235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JEQ15_09235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JEQ15_09240 PF10754 Protein of unknown function (DUF2569) JEQ15_09245 PF02508 Rnf-Nqr subunit, membrane protein JEQ15_09250 PF04060 Putative Fe-S cluster JEQ15_09255 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JEQ15_09255 PF13237 4Fe-4S dicluster domain JEQ15_09255 PF13375 RnfC Barrel sandwich hybrid domain JEQ15_09255 PF10531 SLBB domain JEQ15_09260 PF03116 NQR2, RnfD, RnfE family JEQ15_09265 PF04205 FMN-binding domain JEQ15_09270 PF02508 Rnf-Nqr subunit, membrane protein JEQ15_09275 PF00633 Helix-hairpin-helix motif JEQ15_09275 PF00730 HhH-GPD superfamily base excision DNA repair protein JEQ15_09275 PF10576 Iron-sulfur binding domain of endonuclease III JEQ15_09280 PF08206 Ribonuclease B OB domain JEQ15_09280 PF00773 RNB domain JEQ15_09280 PF00575 S1 RNA binding domain JEQ15_09285 PF01253 Translation initiation factor SUI1 JEQ15_09290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JEQ15_09295 PF18073 Rubredoxin metal binding domain JEQ15_09300 PF06305 Lipopolysaccharide assembly protein A domain JEQ15_09305 PF01569 PAP2 superfamily JEQ15_09310 PF00925 GTP cyclohydrolase II JEQ15_09315 PF03180 NLPA lipoprotein JEQ15_09325 PF00694 Aconitase C-terminal domain JEQ15_09325 PF00330 Aconitase family (aconitate hydratase) JEQ15_09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_09335 PF03466 LysR substrate binding domain JEQ15_09365 PF00080 Copper/zinc superoxide dismutase (SODC) JEQ15_09370 PF01751 Toprim domain JEQ15_09370 PF08272 Topoisomerase I zinc-ribbon-like JEQ15_09370 PF01396 Topoisomerase DNA binding C4 zinc finger JEQ15_09370 PF01131 DNA topoisomerase JEQ15_09375 PF10692 Protein of unknown function (DUF2498) JEQ15_09380 PF01343 Peptidase family S49 JEQ15_09380 PF08496 Peptidase family S49 N-terminal JEQ15_09385 PF00106 short chain dehydrogenase JEQ15_09390 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JEQ15_09400 PF01479 S4 domain JEQ15_09400 PF00849 RNA pseudouridylate synthase JEQ15_09405 PF01300 Telomere recombination JEQ15_09410 PF02811 PHP domain JEQ15_09415 PF04715 Anthranilate synthase component I, N terminal region JEQ15_09415 PF00425 chorismate binding enzyme JEQ15_09420 PF00117 Glutamine amidotransferase class-I JEQ15_09425 PF02885 Glycosyl transferase family, helical bundle domain JEQ15_09425 PF00591 Glycosyl transferase family, a/b domain JEQ15_09430 PF00218 Indole-3-glycerol phosphate synthase JEQ15_09430 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JEQ15_09435 PF00291 Pyridoxal-phosphate dependent enzyme JEQ15_09440 PF00290 Tryptophan synthase alpha chain JEQ15_09450 PF03922 OmpW family JEQ15_09460 PF01740 STAS domain JEQ15_09460 PF00916 Sulfate permease family JEQ15_09465 PF04279 Intracellular septation protein A JEQ15_09470 PF03061 Thioesterase superfamily JEQ15_09475 PF03544 Gram-negative bacterial TonB protein C-terminal JEQ15_09485 PF13396 Phospholipase_D-nuclease N-terminal JEQ15_09485 PF13091 PLD-like domain JEQ15_09490 PF04269 Protein of unknown function, DUF440 JEQ15_09495 PF13505 Outer membrane protein beta-barrel domain JEQ15_09500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JEQ15_09510 PF01810 LysE type translocator JEQ15_09515 PF01171 PP-loop family JEQ15_09520 PF01544 CorA-like Mg2+ transporter protein JEQ15_09535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JEQ15_09540 PF08534 Redoxin JEQ15_09545 PF18024 Helix-turn-helix domain JEQ15_09545 PF00158 Sigma-54 interaction domain JEQ15_09555 PF05128 Domain of unknown function (DUF697) JEQ15_09560 PF04317 YcjX-like family, DUF463 JEQ15_09570 PF04024 PspC domain JEQ15_09575 PF06667 Phage shock protein B JEQ15_09580 PF04012 PspA/IM30 family JEQ15_09585 PF00158 Sigma-54 interaction domain JEQ15_09585 PF02954 Bacterial regulatory protein, Fis family JEQ15_09590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JEQ15_09595 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_09600 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_09600 PF12911 N-terminal TM domain of oligopeptide transport permease C JEQ15_09605 PF00005 ABC transporter JEQ15_09605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JEQ15_09610 PF00005 ABC transporter JEQ15_09620 PF00043 Glutathione S-transferase, C-terminal domain JEQ15_09620 PF02798 Glutathione S-transferase, N-terminal domain JEQ15_09625 PF08543 Phosphomethylpyrimidine kinase JEQ15_09630 PF01479 S4 domain JEQ15_09630 PF00579 tRNA synthetases class I (W and Y) JEQ15_09635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JEQ15_09635 PF01243 Pyridoxamine 5'-phosphate oxidase JEQ15_09640 PF03702 Anhydro-N-acetylmuramic acid kinase JEQ15_09645 PF05433 Glycine zipper 2TM domain JEQ15_09650 PF01047 MarR family JEQ15_09655 PF06945 Protein of unknown function (DUF1289) JEQ15_09660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JEQ15_09665 PF00929 Exonuclease JEQ15_09670 PF00462 Glutaredoxin JEQ15_09680 PF01925 Sulfite exporter TauE/SafE JEQ15_09685 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JEQ15_09685 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JEQ15_09695 PF00356 Bacterial regulatory proteins, lacI family JEQ15_09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_09700 PF03466 LysR substrate binding domain JEQ15_09705 PF07690 Major Facilitator Superfamily JEQ15_09715 PF00677 Lumazine binding domain JEQ15_09720 PF01554 MatE JEQ15_09735 PF00224 Pyruvate kinase, barrel domain JEQ15_09735 PF02887 Pyruvate kinase, alpha/beta domain JEQ15_09740 PF13520 Amino acid permease JEQ15_09745 PF00282 Pyridoxal-dependent decarboxylase conserved domain JEQ15_09755 PF04728 Lipoprotein leucine-zipper JEQ15_09760 PF17969 L,D-transpeptidase C-terminal domain JEQ15_09760 PF01476 LysM domain JEQ15_09760 PF03734 L,D-transpeptidase catalytic domain JEQ15_09765 PF02657 Fe-S metabolism associated domain JEQ15_09770 PF00266 Aminotransferase class-V JEQ15_09775 PF01458 Uncharacterized protein family (UPF0051) JEQ15_09780 PF00005 ABC transporter JEQ15_09785 PF01458 Uncharacterized protein family (UPF0051) JEQ15_09790 PF01521 Iron-sulphur cluster biosynthesis JEQ15_09800 PF03061 Thioesterase superfamily JEQ15_09805 PF01565 FAD binding domain JEQ15_09805 PF02913 FAD linked oxidases, C-terminal domain JEQ15_09805 PF13183 4Fe-4S dicluster domain JEQ15_09810 PF01594 AI-2E family transporter JEQ15_09815 PF00391 PEP-utilising enzyme, mobile domain JEQ15_09815 PF02896 PEP-utilising enzyme, TIM barrel domain JEQ15_09815 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JEQ15_09820 PF03618 Kinase/pyrophosphorylase JEQ15_09825 PF00793 DAHP synthetase I family JEQ15_09830 PF10636 Hemin uptake protein hemP JEQ15_09835 PF00593 TonB dependent receptor JEQ15_09835 PF07715 TonB-dependent Receptor Plug Domain JEQ15_09840 PF00593 TonB dependent receptor JEQ15_09840 PF07715 TonB-dependent Receptor Plug Domain JEQ15_09845 PF05171 Haemin-degrading HemS.ChuX domain JEQ15_09850 PF01497 Periplasmic binding protein JEQ15_09855 PF01032 FecCD transport family JEQ15_09860 PF00005 ABC transporter JEQ15_09865 PF01037 Lrp/AsnC ligand binding domain JEQ15_09870 PF01810 LysE type translocator JEQ15_09875 PF00155 Aminotransferase class I and II JEQ15_09875 PF00392 Bacterial regulatory proteins, gntR family JEQ15_09880 PF01654 Cytochrome bd terminal oxidase subunit I JEQ15_09885 PF02322 Cytochrome bd terminal oxidase subunit II JEQ15_09900 PF05656 Protein of unknown function (DUF805) JEQ15_09905 PF02562 PhoH-like protein JEQ15_09915 PF04231 Endonuclease I JEQ15_09925 PF12821 Threonine/Serine exporter, ThrE JEQ15_09930 PF06738 Putative threonine/serine exporter JEQ15_09945 PF00582 Universal stress protein family JEQ15_09955 PF00582 Universal stress protein family JEQ15_09960 PF01256 Carbohydrate kinase JEQ15_09965 PF10769 Protein of unknown function (DUF2594) JEQ15_09975 PF00490 Delta-aminolevulinic acid dehydratase JEQ15_09985 PF07969 Amidohydrolase family JEQ15_09990 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JEQ15_09995 PF00732 GMC oxidoreductase JEQ15_09995 PF05199 GMC oxidoreductase JEQ15_10000 PF00171 Aldehyde dehydrogenase family JEQ15_10005 PF00440 Bacterial regulatory proteins, tetR family JEQ15_10005 PF13977 BetI-type transcriptional repressor, C-terminal JEQ15_10010 PF02028 BCCT, betaine/carnitine/choline family transporter JEQ15_10015 PF00155 Aminotransferase class I and II JEQ15_10025 PF00419 Fimbrial protein JEQ15_10030 PF13953 PapC C-terminal domain JEQ15_10030 PF13954 PapC N-terminal domain JEQ15_10030 PF00577 Outer membrane usher protein JEQ15_10035 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_10035 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_10040 PF00419 Fimbrial protein JEQ15_10045 PF00419 Fimbrial protein JEQ15_10050 PF01381 Helix-turn-helix JEQ15_10055 PF00005 ABC transporter JEQ15_10055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JEQ15_10060 PF00005 ABC transporter JEQ15_10060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JEQ15_10065 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_10065 PF12911 N-terminal TM domain of oligopeptide transport permease C JEQ15_10070 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_10075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JEQ15_10080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JEQ15_10085 PF10414 Sirohaem synthase dimerisation region JEQ15_10085 PF14824 Sirohaem biosynthesis protein central JEQ15_10085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JEQ15_10090 PF13806 Rieske-like [2Fe-2S] domain JEQ15_10095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JEQ15_10095 PF18267 Rubredoxin NAD+ reductase C-terminal domain JEQ15_10095 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_10095 PF04324 BFD-like [2Fe-2S] binding domain JEQ15_10095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JEQ15_10100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JEQ15_10105 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_10110 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_10110 PF12911 N-terminal TM domain of oligopeptide transport permease C JEQ15_10115 PF00005 ABC transporter JEQ15_10115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JEQ15_10120 PF00005 ABC transporter JEQ15_10120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JEQ15_10125 PF01914 MarC family integral membrane protein JEQ15_10130 PF00171 Aldehyde dehydrogenase family JEQ15_10130 PF00465 Iron-containing alcohol dehydrogenase JEQ15_10135 PF00265 Thymidine kinase JEQ15_10140 PF00816 H-NS histone family JEQ15_10145 PF01370 NAD dependent epimerase/dehydratase family JEQ15_10150 PF00483 Nucleotidyl transferase JEQ15_10155 PF00072 Response regulator receiver domain JEQ15_10160 PF02810 SEC-C motif JEQ15_10165 PF01842 ACT domain JEQ15_10165 PF00551 Formyl transferase JEQ15_10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_10175 PF03466 LysR substrate binding domain JEQ15_10180 PF03372 Endonuclease/Exonuclease/phosphatase family JEQ15_10185 PF01131 DNA topoisomerase JEQ15_10185 PF01751 Toprim domain JEQ15_10190 PF00586 AIR synthase related protein, N-terminal domain JEQ15_10190 PF02769 AIR synthase related protein, C-terminal domain JEQ15_10195 PF00881 Nitroreductase family JEQ15_10200 PF01343 Peptidase family S49 JEQ15_10205 PF00710 Asparaginase, N-terminal JEQ15_10205 PF17763 Glutaminase/Asparaginase C-terminal domain JEQ15_10210 PF00857 Isochorismatase family JEQ15_10215 PF07023 Protein of unknown function (DUF1315) JEQ15_10220 PF01641 SelR domain JEQ15_10225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JEQ15_10225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JEQ15_10230 PF01263 Aldose 1-epimerase JEQ15_10235 PF06629 MltA-interacting protein MipA JEQ15_10240 PF00708 Acylphosphatase JEQ15_10240 PF17788 HypF Kae1-like domain JEQ15_10240 PF01300 Telomere recombination JEQ15_10240 PF07503 HypF finger JEQ15_10245 PF00842 Alanine racemase, C-terminal domain JEQ15_10245 PF01168 Alanine racemase, N-terminal domain JEQ15_10250 PF01266 FAD dependent oxidoreductase JEQ15_10255 PF07840 FadR C-terminal domain JEQ15_10255 PF00392 Bacterial regulatory proteins, gntR family JEQ15_10260 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JEQ15_10265 PF02600 Disulfide bond formation protein DsbB JEQ15_10275 PF00893 Small Multidrug Resistance protein JEQ15_10280 PF07690 Major Facilitator Superfamily JEQ15_10295 PF03824 High-affinity nickel-transport protein JEQ15_10300 PF06226 Protein of unknown function (DUF1007) JEQ15_10330 PF01066 CDP-alcohol phosphatidyltransferase JEQ15_10335 PF01541 GIY-YIG catalytic domain JEQ15_10335 PF02151 UvrB/uvrC motif JEQ15_10335 PF08459 UvrC Helix-hairpin-helix N-terminal JEQ15_10340 PF00196 Bacterial regulatory proteins, luxR family JEQ15_10340 PF00072 Response regulator receiver domain JEQ15_10345 PF00881 Nitroreductase family JEQ15_10350 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JEQ15_10355 PF02126 Phosphotriesterase family JEQ15_10370 PF00294 pfkB family carbohydrate kinase JEQ15_10410 PF01381 Helix-turn-helix JEQ15_10410 PF00717 Peptidase S24-like JEQ15_10415 PF00005 ABC transporter JEQ15_10420 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_10430 PF04198 Putative sugar-binding domain JEQ15_10435 PF03091 CutA1 divalent ion tolerance protein JEQ15_10450 PF10127 RNA repair pathway DNA polymerase beta family JEQ15_10590 PF05866 Endodeoxyribonuclease RusA JEQ15_10605 PF17948 DnaT DNA-binding domain JEQ15_10650 PF00589 Phage integrase family JEQ15_10650 PF13356 Arm DNA-binding domain JEQ15_10650 PF14659 Phage integrase, N-terminal SAM-like domain JEQ15_10655 PF00958 GMP synthase C terminal domain JEQ15_10655 PF02540 NAD synthase JEQ15_10655 PF00117 Glutamine amidotransferase class-I JEQ15_10660 PF00571 CBS domain JEQ15_10660 PF00478 IMP dehydrogenase / GMP reductase domain JEQ15_10665 PF02601 Exonuclease VII, large subunit JEQ15_10665 PF13742 OB-fold nucleic acid binding domain JEQ15_10670 PF07715 TonB-dependent Receptor Plug Domain JEQ15_10670 PF00593 TonB dependent receptor JEQ15_10675 PF00326 Prolyl oligopeptidase family JEQ15_10675 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JEQ15_10690 PF03949 Malic enzyme, NAD binding domain JEQ15_10690 PF01515 Phosphate acetyl/butaryl transferase JEQ15_10690 PF00390 Malic enzyme, N-terminal domain JEQ15_10695 PF00196 Bacterial regulatory proteins, luxR family JEQ15_10695 PF00072 Response regulator receiver domain JEQ15_10705 PF03960 ArsC family JEQ15_10710 PF07687 Peptidase dimerisation domain JEQ15_10710 PF01546 Peptidase family M20/M25/M40 JEQ15_10715 PF02557 D-alanyl-D-alanine carboxypeptidase JEQ15_10725 PF04304 Protein of unknown function (DUF454) JEQ15_10730 PF13980 Uncharacterised protein family (UPF0370) JEQ15_10735 PF13718 GNAT acetyltransferase 2 JEQ15_10735 PF17176 tRNA-binding domain JEQ15_10735 PF05127 Helicase JEQ15_10735 PF08351 Domain of unknown function (DUF1726) JEQ15_10740 PF04284 Protein of unknown function (DUF441) JEQ15_10745 PF04228 Putative neutral zinc metallopeptidase JEQ15_10750 PF01259 SAICAR synthetase JEQ15_10755 PF06804 NlpB/DapX lipoprotein JEQ15_10760 PF00701 Dihydrodipicolinate synthetase family JEQ15_10765 PF01842 ACT domain JEQ15_10770 PF00578 AhpC/TSA family JEQ15_10775 PF01594 AI-2E family transporter JEQ15_10780 PF07720 Tetratricopeptide repeat JEQ15_10780 PF01435 Peptidase family M48 JEQ15_10785 PF03960 ArsC family JEQ15_10790 PF03825 Nucleoside H+ symporter JEQ15_10795 PF00308 Bacterial dnaA protein JEQ15_10800 PF00924 Mechanosensitive ion channel JEQ15_10805 PF00860 Permease family JEQ15_10815 PF00586 AIR synthase related protein, N-terminal domain JEQ15_10815 PF02769 AIR synthase related protein, C-terminal domain JEQ15_10820 PF00551 Formyl transferase JEQ15_10825 PF13302 Acetyltransferase (GNAT) domain JEQ15_10830 PF02503 Polyphosphate kinase middle domain JEQ15_10830 PF13089 Polyphosphate kinase N-terminal domain JEQ15_10830 PF13090 Polyphosphate kinase C-terminal domain 2 JEQ15_10830 PF17941 Polyphosphate kinase C-terminal domain 1 JEQ15_10835 PF02541 Ppx/GppA phosphatase family JEQ15_10840 PF01769 Divalent cation transporter JEQ15_10840 PF03448 MgtE intracellular N domain JEQ15_10840 PF00571 CBS domain JEQ15_10850 PF07690 Major Facilitator Superfamily JEQ15_10860 PF00854 POT family JEQ15_10865 PF13533 Biotin-lipoyl like JEQ15_10870 PF00873 AcrB/AcrD/AcrF family JEQ15_10875 PF00873 AcrB/AcrD/AcrF family JEQ15_10880 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_10880 PF00672 HAMP domain JEQ15_10885 PF00072 Response regulator receiver domain JEQ15_10885 PF00486 Transcriptional regulatory protein, C terminal JEQ15_10890 PF16325 Peptidase family U32 C-terminal domain JEQ15_10890 PF01136 Peptidase family U32 JEQ15_10895 PF00781 Diacylglycerol kinase catalytic domain JEQ15_10900 PF01791 DeoC/LacD family aldolase JEQ15_10905 PF08543 Phosphomethylpyrimidine kinase JEQ15_10915 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP JEQ15_10920 PF00324 Amino acid permease JEQ15_10930 PF12833 Helix-turn-helix domain JEQ15_10940 PF05525 Branched-chain amino acid transport protein JEQ15_10945 PF01510 N-acetylmuramoyl-L-alanine amidase JEQ15_10950 PF01235 Sodium:alanine symporter family JEQ15_10955 PF06440 DNA polymerase III, theta subunit JEQ15_10960 PF13995 YebF-like protein JEQ15_10965 PF03701 Uncharacterised protein family (UPF0181) JEQ15_10970 PF04715 Anthranilate synthase component I, N terminal region JEQ15_10970 PF00425 chorismate binding enzyme JEQ15_10975 PF00293 NUDIX domain JEQ15_10980 PF03315 Serine dehydratase beta chain JEQ15_10980 PF03313 Serine dehydratase alpha chain JEQ15_10985 PF02659 Putative manganese efflux pump JEQ15_10990 PF13847 Methyltransferase domain JEQ15_10995 PF06146 Phosphate-starvation-inducible E JEQ15_11000 PF00582 Universal stress protein family JEQ15_11010 PF00582 Universal stress protein family JEQ15_11015 PF00324 Amino acid permease JEQ15_11025 PF00474 Sodium:solute symporter family JEQ15_11030 PF00171 Aldehyde dehydrogenase family JEQ15_11030 PF01619 Proline dehydrogenase JEQ15_11030 PF14850 DNA-binding domain of Proline dehydrogenase JEQ15_11030 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JEQ15_11035 PF02899 Phage integrase, N-terminal SAM-like domain JEQ15_11040 PF04542 Sigma-70 region 2 JEQ15_11040 PF04539 Sigma-70 region 3 JEQ15_11040 PF04545 Sigma-70, region 4 JEQ15_11045 PF00700 Bacterial flagellin C-terminal helical region JEQ15_11045 PF00669 Bacterial flagellin N-terminal helical region JEQ15_11050 PF00700 Bacterial flagellin C-terminal helical region JEQ15_11050 PF00669 Bacterial flagellin N-terminal helical region JEQ15_11055 PF02465 Flagellar hook-associated protein 2 N-terminus JEQ15_11055 PF07195 Flagellar hook-associated protein 2 C-terminus JEQ15_11055 PF07196 Flagellin hook IN motif JEQ15_11060 PF02561 Flagellar protein FliS JEQ15_11065 PF05400 Flagellar protein FliT JEQ15_11090 PF02049 Flagellar hook-basal body complex protein FliE JEQ15_11095 PF01514 Secretory protein of YscJ/FliF family JEQ15_11095 PF08345 Flagellar M-ring protein C-terminal JEQ15_11100 PF01706 FliG C-terminal domain JEQ15_11100 PF14841 FliG middle domain JEQ15_11100 PF14842 FliG N-terminal domain JEQ15_11105 PF02108 Flagellar assembly protein FliH JEQ15_11110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JEQ15_11110 PF18269 T3SS EscN ATPase C-terminal domain JEQ15_11115 PF02050 Flagellar FliJ protein JEQ15_11120 PF02120 Flagellar hook-length control protein FliK JEQ15_11125 PF03748 Flagellar basal body-associated protein FliL JEQ15_11130 PF02154 Flagellar motor switch protein FliM JEQ15_11130 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JEQ15_11135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JEQ15_11135 PF16973 Flagellar motor switch protein FliN N-terminal JEQ15_11140 PF04347 Flagellar biosynthesis protein, FliO JEQ15_11145 PF00813 FliP family JEQ15_11150 PF01313 Bacterial export proteins, family 3 JEQ15_11155 PF01311 Bacterial export proteins, family 1 JEQ15_11160 PF00669 Bacterial flagellin N-terminal helical region JEQ15_11165 PF00460 Flagella basal body rod protein JEQ15_11165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JEQ15_11170 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JEQ15_11170 PF10135 Rod binding protein JEQ15_11175 PF02119 Flagellar P-ring protein JEQ15_11180 PF02107 Flagellar L-ring protein JEQ15_11185 PF00460 Flagella basal body rod protein JEQ15_11185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JEQ15_11190 PF00460 Flagella basal body rod protein JEQ15_11190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JEQ15_11195 PF07559 Flagellar basal body protein FlaE JEQ15_11195 PF00460 Flagella basal body rod protein JEQ15_11195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JEQ15_11200 PF13861 FlgD Tudor-like domain JEQ15_11200 PF13860 FlgD Ig-like domain JEQ15_11200 PF03963 Flagellar hook capping protein - N-terminal region JEQ15_11205 PF00460 Flagella basal body rod protein JEQ15_11205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JEQ15_11210 PF00460 Flagella basal body rod protein JEQ15_11215 PF13144 Chaperone for flagella basal body P-ring formation JEQ15_11215 PF17656 FlgA N-terminal domain JEQ15_11220 PF04316 Anti-sigma-28 factor, FlgM JEQ15_11225 PF05130 FlgN protein JEQ15_11230 PF13332 Hemagglutinin repeat JEQ15_11230 PF04829 Pre-toxin domain with VENN motif JEQ15_11230 PF13018 Extended Signal Peptide of Type V secretion system JEQ15_11230 PF05860 haemagglutination activity domain JEQ15_11235 PF00771 FHIPEP family JEQ15_11240 PF01312 FlhB HrpN YscU SpaS Family JEQ15_11245 PF04344 Chemotaxis phosphatase, CheZ JEQ15_11250 PF00072 Response regulator receiver domain JEQ15_11255 PF01339 CheB methylesterase JEQ15_11255 PF00072 Response regulator receiver domain JEQ15_11260 PF01739 CheR methyltransferase, SAM binding domain JEQ15_11260 PF03705 CheR methyltransferase, all-alpha domain JEQ15_11265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JEQ15_11265 PF00672 HAMP domain JEQ15_11265 PF02203 Tar ligand binding domain homologue JEQ15_11270 PF00672 HAMP domain JEQ15_11270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JEQ15_11270 PF02203 Tar ligand binding domain homologue JEQ15_11275 PF01584 CheW-like domain JEQ15_11280 PF01584 CheW-like domain JEQ15_11280 PF09078 CheY binding JEQ15_11280 PF02895 Signal transducing histidine kinase, homodimeric domain JEQ15_11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_11280 PF01627 Hpt domain JEQ15_11285 PF00691 OmpA family JEQ15_11285 PF13677 Membrane MotB of proton-channel complex MotA/MotB JEQ15_11290 PF01618 MotA/TolQ/ExbB proton channel family JEQ15_11295 PF05280 Flagellar transcriptional activator (FlhC) JEQ15_11300 PF05247 Flagellar transcriptional activator (FlhD) JEQ15_11305 PF02308 MgtC family JEQ15_11310 PF10781 Dextransucrase DSRB JEQ15_11315 PF00313 'Cold-shock' DNA-binding domain JEQ15_11320 PF10777 Inner membrane protein YlaC JEQ15_11345 PF01979 Amidohydrolase family JEQ15_11350 PF13991 BssS protein family JEQ15_11360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JEQ15_11360 PF00384 Molybdopterin oxidoreductase JEQ15_11360 PF01568 Molydopterin dinucleotide binding domain JEQ15_11365 PF03916 Polysulphide reductase, NrfD JEQ15_11370 PF13247 4Fe-4S dicluster domain JEQ15_11375 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_11375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_11380 PF00072 Response regulator receiver domain JEQ15_11380 PF00196 Bacterial regulatory proteins, luxR family JEQ15_11385 PF03279 Bacterial lipid A biosynthesis acyltransferase JEQ15_11390 PF07690 Major Facilitator Superfamily JEQ15_11395 PF00854 POT family JEQ15_11400 PF02567 Phenazine biosynthesis-like protein JEQ15_11405 PF03061 Thioesterase superfamily JEQ15_11415 PF13018 Extended Signal Peptide of Type V secretion system JEQ15_11415 PF05662 Coiled stalk of trimeric autotransporter adhesin JEQ15_11415 PF05658 Head domain of trimeric autotransporter adhesin JEQ15_11415 PF03895 YadA-like membrane anchor domain JEQ15_11415 PF13018 Extended Signal Peptide of Type V secretion system JEQ15_11415 PF05658 Head domain of trimeric autotransporter adhesin JEQ15_11415 PF05662 Coiled stalk of trimeric autotransporter adhesin JEQ15_11415 PF03895 YadA-like membrane anchor domain JEQ15_11420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JEQ15_11430 PF00072 Response regulator receiver domain JEQ15_11430 PF00486 Transcriptional regulatory protein, C terminal JEQ15_11435 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_11435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_11445 PF03591 AzlC protein JEQ15_11455 PF01063 Amino-transferase class IV JEQ15_11460 PF03729 Short repeat of unknown function (DUF308) JEQ15_11470 PF00924 Mechanosensitive ion channel JEQ15_11475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JEQ15_11475 PF00384 Molybdopterin oxidoreductase JEQ15_11475 PF01568 Molydopterin dinucleotide binding domain JEQ15_11480 PF12800 4Fe-4S binding domain JEQ15_11480 PF13247 4Fe-4S dicluster domain JEQ15_11485 PF04976 DMSO reductase anchor subunit (DmsC) JEQ15_11495 PF10753 Toxin GhoT_OrtT JEQ15_11590 PF00579 tRNA synthetases class I (W and Y) JEQ15_11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_11615 PF01627 Hpt domain JEQ15_11615 PF16359 RcsD-ABL domain JEQ15_11620 PF00196 Bacterial regulatory proteins, luxR family JEQ15_11620 PF00072 Response regulator receiver domain JEQ15_11625 PF00072 Response regulator receiver domain JEQ15_11625 PF09456 RcsC Alpha-Beta-Loop (ABL) JEQ15_11625 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_11630 PF00521 DNA gyrase/topoisomerase IV, subunit A JEQ15_11630 PF03989 DNA gyrase C-terminal domain, beta-propeller JEQ15_11640 PF02867 Ribonucleotide reductase, barrel domain JEQ15_11640 PF00317 Ribonucleotide reductase, all-alpha domain JEQ15_11640 PF03477 ATP cone domain JEQ15_11645 PF00268 Ribonucleotide reductase, small chain JEQ15_11650 PF00111 2Fe-2S iron-sulfur cluster binding domain JEQ15_11655 PF06004 Bacterial protein of unknown function (DUF903) JEQ15_11660 PF03222 Tryptophan/tyrosine permease family JEQ15_11665 PF07437 YfaZ precursor JEQ15_11670 PF00199 Catalase JEQ15_11670 PF06628 Catalase-related immune-responsive JEQ15_11675 PF00501 AMP-binding enzyme JEQ15_11675 PF13193 AMP-binding enzyme C-terminal domain JEQ15_11680 PF13378 Enolase C-terminal domain-like JEQ15_11685 PF00378 Enoyl-CoA hydratase/isomerase JEQ15_11690 PF12697 Alpha/beta hydrolase family JEQ15_11695 PF16582 Middle domain of thiamine pyrophosphate JEQ15_11695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JEQ15_11700 PF00425 chorismate binding enzyme JEQ15_11715 PF00361 Proton-conducting membrane transporter JEQ15_11720 PF00361 Proton-conducting membrane transporter JEQ15_11725 PF00361 Proton-conducting membrane transporter JEQ15_11725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JEQ15_11730 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JEQ15_11735 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JEQ15_11740 PF12838 4Fe-4S dicluster domain JEQ15_11745 PF00146 NADH dehydrogenase JEQ15_11750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JEQ15_11750 PF00384 Molybdopterin oxidoreductase JEQ15_11750 PF01568 Molydopterin dinucleotide binding domain JEQ15_11750 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JEQ15_11755 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JEQ15_11755 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JEQ15_11755 PF10531 SLBB domain JEQ15_11765 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JEQ15_11765 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JEQ15_11770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JEQ15_11775 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JEQ15_11780 PF03466 LysR substrate binding domain JEQ15_11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_11785 PF00155 Aminotransferase class I and II JEQ15_11795 PF03600 Citrate transporter JEQ15_11795 PF02080 TrkA-C domain JEQ15_11800 PF13419 Haloacid dehalogenase-like hydrolase JEQ15_11805 PF03887 YfbU domain JEQ15_11810 PF04217 Protein of unknown function, DUF412 JEQ15_11815 PF00871 Acetokinase family JEQ15_11820 PF01515 Phosphate acetyl/butaryl transferase JEQ15_11820 PF07085 DRTGG domain JEQ15_11825 PF01848 Hok/gef family JEQ15_11830 PF01848 Hok/gef family JEQ15_11835 PF01848 Hok/gef family JEQ15_11840 PF01011 PQQ enzyme repeat JEQ15_11845 PF00842 Alanine racemase, C-terminal domain JEQ15_11845 PF01168 Alanine racemase, N-terminal domain JEQ15_11850 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) JEQ15_11855 PF01867 CRISPR associated protein Cas1 JEQ15_11865 PF09704 CRISPR-associated protein (Cas_Cas5) JEQ15_11885 PF00270 DEAD/DEAH box helicase JEQ15_11885 PF00271 Helicase conserved C-terminal domain JEQ15_11885 PF18019 HD domain JEQ15_11890 PF03611 PTS system sugar-specific permease component JEQ15_11900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JEQ15_11905 PF00356 Bacterial regulatory proteins, lacI family JEQ15_11905 PF13407 Periplasmic binding protein domain JEQ15_11910 PF00293 NUDIX domain JEQ15_11915 PF00043 Glutathione S-transferase, C-terminal domain JEQ15_11915 PF02798 Glutathione S-transferase, N-terminal domain JEQ15_11920 PF08338 Domain of unknown function (DUF1731) JEQ15_11920 PF01370 NAD dependent epimerase/dehydratase family JEQ15_11925 PF02441 Flavoprotein JEQ15_11930 PF00156 Phosphoribosyl transferase domain JEQ15_11935 PF02674 Colicin V production protein JEQ15_11940 PF05036 Sporulation related domain JEQ15_11945 PF02875 Mur ligase family, glutamate ligase domain JEQ15_11945 PF08245 Mur ligase middle domain JEQ15_11950 PF01039 Carboxyl transferase domain JEQ15_11950 PF17848 Acetyl-coA carboxylase zinc finger domain JEQ15_11955 PF09335 SNARE associated Golgi protein JEQ15_11960 PF01416 tRNA pseudouridine synthase JEQ15_11965 PF01118 Semialdehyde dehydrogenase, NAD binding domain JEQ15_11965 PF02774 Semialdehyde dehydrogenase, dimerisation domain JEQ15_11970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JEQ15_11970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JEQ15_11970 PF11890 Domain of unknown function (DUF3410) JEQ15_11975 PF12833 Helix-turn-helix domain JEQ15_11980 PF00892 EamA-like transporter family JEQ15_11985 PF00109 Beta-ketoacyl synthase, N-terminal domain JEQ15_11985 PF02801 Beta-ketoacyl synthase, C-terminal domain JEQ15_11990 PF01266 FAD dependent oxidoreductase JEQ15_11990 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JEQ15_11995 PF00583 Acetyltransferase (GNAT) family JEQ15_12005 PF08891 YfcL protein JEQ15_12010 PF04315 Elongation factor P hydroxylase JEQ15_12015 PF01925 Sulfite exporter TauE/SafE JEQ15_12020 PF01264 Chorismate synthase JEQ15_12025 PF05175 Methyltransferase small domain JEQ15_12030 PF00210 Ferritin-like domain JEQ15_12035 PF01713 Smr domain JEQ15_12040 PF00300 Histidine phosphatase superfamily (branch 1) JEQ15_12045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JEQ15_12045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JEQ15_12045 PF00378 Enoyl-CoA hydratase/isomerase JEQ15_12050 PF02803 Thiolase, C-terminal domain JEQ15_12050 PF00108 Thiolase, N-terminal domain JEQ15_12055 PF04175 Protein of unknown function (DUF406) JEQ15_12060 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JEQ15_12065 PF04333 MlaA lipoprotein JEQ15_12085 PF01568 Molydopterin dinucleotide binding domain JEQ15_12085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JEQ15_12085 PF00384 Molybdopterin oxidoreductase JEQ15_12090 PF13247 4Fe-4S dicluster domain JEQ15_12090 PF12800 4Fe-4S binding domain JEQ15_12095 PF01292 Prokaryotic cytochrome b561 JEQ15_12100 PF01381 Helix-turn-helix JEQ15_12145 PF00749 tRNA synthetases class I (E and Q), catalytic domain JEQ15_12170 PF12843 Putative quorum-sensing-regulated virulence factor JEQ15_12175 PF01773 Na+ dependent nucleoside transporter N-terminus JEQ15_12175 PF07670 Nucleoside recognition JEQ15_12175 PF07662 Na+ dependent nucleoside transporter C-terminus JEQ15_12180 PF00533 BRCA1 C Terminus (BRCT) domain JEQ15_12180 PF01653 NAD-dependent DNA ligase adenylation domain JEQ15_12180 PF03120 NAD-dependent DNA ligase OB-fold domain JEQ15_12180 PF12826 Helix-hairpin-helix motif JEQ15_12180 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JEQ15_12185 PF04354 ZipA, C-terminal FtsZ-binding domain JEQ15_12195 PF00291 Pyridoxal-phosphate dependent enzyme JEQ15_12200 PF00381 PTS HPr component phosphorylation site JEQ15_12205 PF05524 PEP-utilising enzyme, N-terminal JEQ15_12205 PF00391 PEP-utilising enzyme, mobile domain JEQ15_12205 PF02896 PEP-utilising enzyme, TIM barrel domain JEQ15_12210 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JEQ15_12215 PF00291 Pyridoxal-phosphate dependent enzyme JEQ15_12225 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_12230 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_12240 PF04261 Dyp-type peroxidase family JEQ15_12245 PF06572 Protein of unknown function (DUF1131) JEQ15_12250 PF00583 Acetyltransferase (GNAT) family JEQ15_12255 PF01218 Coproporphyrinogen III oxidase JEQ15_12265 PF01926 50S ribosome-binding GTPase JEQ15_12265 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JEQ15_12270 PF13360 PQQ-like domain JEQ15_12275 PF09976 Tetratricopeptide repeat-like domain JEQ15_12280 PF03129 Anticodon binding domain JEQ15_12280 PF13393 Histidyl-tRNA synthetase JEQ15_12285 PF04551 GcpE protein JEQ15_12290 PF13464 Domain of unknown function (DUF4115) JEQ15_12300 PF04055 Radical SAM superfamily JEQ15_12305 PF00334 Nucleoside diphosphate kinase JEQ15_12310 PF00912 Transglycosylase JEQ15_12310 PF00905 Penicillin binding protein transpeptidase domain JEQ15_12310 PF06832 Penicillin-Binding Protein C-terminus Family JEQ15_12315 PF07678 A-macroglobulin TED domain JEQ15_12315 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JEQ15_12315 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JEQ15_12315 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JEQ15_12315 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JEQ15_12315 PF01835 MG2 domain JEQ15_12315 PF07703 Alpha-2-macroglobulin bait region domain JEQ15_12315 PF00207 Alpha-2-macroglobulin family JEQ15_12315 PF17962 Bacterial macroglobulin domain 6 JEQ15_12320 PF07179 SseB protein N-terminal domain JEQ15_12320 PF14581 SseB protein C-terminal domain JEQ15_12325 PF12404 Peptidase JEQ15_12325 PF00883 Cytosol aminopeptidase family, catalytic domain JEQ15_12330 PF04384 Iron-sulphur cluster assembly JEQ15_12335 PF00111 2Fe-2S iron-sulfur cluster binding domain JEQ15_12340 PF00012 Hsp70 protein JEQ15_12345 PF00226 DnaJ domain JEQ15_12345 PF07743 HSCB C-terminal oligomerisation domain JEQ15_12350 PF01521 Iron-sulphur cluster biosynthesis JEQ15_12355 PF01592 NifU-like N terminal domain JEQ15_12360 PF00266 Aminotransferase class-V JEQ15_12365 PF02082 Transcriptional regulator JEQ15_12370 PF00588 SpoU rRNA Methylase family JEQ15_12375 PF00459 Inositol monophosphatase family JEQ15_12390 PF12832 MFS_1 like family JEQ15_12395 PF00464 Serine hydroxymethyltransferase JEQ15_12400 PF00970 Oxidoreductase FAD-binding domain JEQ15_12400 PF00042 Globin JEQ15_12400 PF00175 Oxidoreductase NAD-binding domain JEQ15_12410 PF00543 Nitrogen regulatory protein P-II JEQ15_12415 PF00795 Carbon-nitrogen hydrolase JEQ15_12415 PF02540 NAD synthase JEQ15_12420 PF00158 Sigma-54 interaction domain JEQ15_12420 PF00072 Response regulator receiver domain JEQ15_12425 PF13942 YfhG lipoprotein JEQ15_12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_12430 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_12435 PF02769 AIR synthase related protein, C-terminal domain JEQ15_12435 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JEQ15_12435 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JEQ15_12440 PF00497 Bacterial extracellular solute-binding proteins, family 3 JEQ15_12440 PF01464 Transglycosylase SLT domain JEQ15_12445 PF00419 Fimbrial protein JEQ15_12450 PF00577 Outer membrane usher protein JEQ15_12450 PF13954 PapC N-terminal domain JEQ15_12450 PF13953 PapC C-terminal domain JEQ15_12455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_12455 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_12460 PF00419 Fimbrial protein JEQ15_12465 PF00419 Fimbrial protein JEQ15_12470 PF14437 MafB19-like deaminase JEQ15_12475 PF12838 4Fe-4S dicluster domain JEQ15_12480 PF01648 4'-phosphopantetheinyl transferase superfamily JEQ15_12485 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JEQ15_12490 PF02565 Recombination protein O C terminal JEQ15_12490 PF11967 Recombination protein O N terminal JEQ15_12495 PF01926 50S ribosome-binding GTPase JEQ15_12495 PF07650 KH domain JEQ15_12500 PF00035 Double-stranded RNA binding motif JEQ15_12500 PF14622 Ribonuclease-III-like JEQ15_12505 PF10502 Signal peptidase, peptidase S26 JEQ15_12510 PF00679 Elongation factor G C-terminus JEQ15_12510 PF00009 Elongation factor Tu GTP binding domain JEQ15_12510 PF03144 Elongation factor Tu domain 2 JEQ15_12510 PF06421 GTP-binding protein LepA C-terminus JEQ15_12520 PF03888 MucB/RseB N-terminal domain JEQ15_12520 PF17188 MucB/RseB C-terminal domain JEQ15_12525 PF03873 Anti sigma-E protein RseA, C-terminal domain JEQ15_12525 PF03872 Anti sigma-E protein RseA, N-terminal domain JEQ15_12530 PF08281 Sigma-70, region 4 JEQ15_12530 PF04542 Sigma-70 region 2 JEQ15_12535 PF05175 Methyltransferase small domain JEQ15_12540 PF00270 DEAD/DEAH box helicase JEQ15_12540 PF00271 Helicase conserved C-terminal domain JEQ15_12545 PF01228 Glycine radical JEQ15_12550 PF03167 Uracil DNA glycosylase superfamily JEQ15_12555 PF01025 GrpE JEQ15_12560 PF01513 ATP-NAD kinase JEQ15_12565 PF02463 RecF/RecN/SMC N terminal domain JEQ15_12570 PF04355 SmpA / OmlA family JEQ15_12575 PF03658 RnfH family Ubiquitin JEQ15_12580 PF03364 Polyketide cyclase / dehydrase and lipid transport JEQ15_12585 PF01668 SmpB protein JEQ15_12605 PF17854 FtsK alpha domain JEQ15_12605 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JEQ15_12605 PF01580 FtsK/SpoIIIE family JEQ15_12605 PF09397 Ftsk gamma domain JEQ15_12680 PF06039 Malate:quinone oxidoreductase (Mqo) JEQ15_12695 PF02525 Flavodoxin-like fold JEQ15_12700 PF02652 L-lactate permease JEQ15_12705 PF02754 Cysteine-rich domain JEQ15_12710 PF13183 4Fe-4S dicluster domain JEQ15_12710 PF02589 LUD domain JEQ15_12710 PF11870 Domain of unknown function (DUF3390) JEQ15_12715 PF02589 LUD domain JEQ15_12730 PF03692 Putative zinc- or iron-chelating domain JEQ15_12735 PF06940 Domain of unknown function (DUF1287) JEQ15_12740 PF07690 Major Facilitator Superfamily JEQ15_12745 PF00756 Putative esterase JEQ15_12750 PF07715 TonB-dependent Receptor Plug Domain JEQ15_12750 PF00593 TonB dependent receptor JEQ15_12755 PF00474 Sodium:solute symporter family JEQ15_12760 PF00356 Bacterial regulatory proteins, lacI family JEQ15_12765 PF01263 Aldose 1-epimerase JEQ15_12770 PF10509 Galactokinase galactose-binding signature JEQ15_12770 PF00288 GHMP kinases N terminal domain JEQ15_12770 PF08544 GHMP kinases C terminal JEQ15_12775 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JEQ15_12775 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JEQ15_12780 PF16363 GDP-mannose 4,6 dehydratase JEQ15_12785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JEQ15_12785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JEQ15_12790 PF01545 Cation efflux family JEQ15_12790 PF16916 Dimerisation domain of Zinc Transporter JEQ15_12795 PF00582 Universal stress protein family JEQ15_12800 PF03974 Ecotin JEQ15_12805 PF04325 Protein of unknown function (DUF465) JEQ15_12810 PF10678 Protein of unknown function (DUF2492) JEQ15_12820 PF11756 Nitrous oxide-stimulated promoter JEQ15_12825 PF13302 Acetyltransferase (GNAT) domain JEQ15_12835 PF12833 Helix-turn-helix domain JEQ15_12855 PF03358 NADPH-dependent FMN reductase JEQ15_12875 PF00152 tRNA synthetases class II (D, K and N) JEQ15_12875 PF01336 OB-fold nucleic acid binding domain JEQ15_12885 PF01368 DHH family JEQ15_12885 PF02272 DHHA1 domain JEQ15_12885 PF17768 RecJ OB domain JEQ15_12890 PF10411 Disulfide bond isomerase protein N-terminus JEQ15_12890 PF13098 Thioredoxin-like domain JEQ15_12895 PF02899 Phage integrase, N-terminal SAM-like domain JEQ15_12895 PF00589 Phage integrase family JEQ15_12900 PF00258 Flavodoxin JEQ15_12905 PF07254 Membrane-bound toxin component of toxin-antitoxin system JEQ15_12910 PF03937 Flavinator of succinate dehydrogenase JEQ15_12915 PF01571 Aminomethyltransferase folate-binding domain JEQ15_12925 PF02347 Glycine cleavage system P-protein JEQ15_12930 PF01597 Glycine cleavage H-protein JEQ15_12935 PF08669 Glycine cleavage T-protein C-terminal barrel domain JEQ15_12935 PF01571 Aminomethyltransferase folate-binding domain JEQ15_12940 PF01494 FAD binding domain JEQ15_12945 PF01494 FAD binding domain JEQ15_12950 PF00557 Metallopeptidase family M24 JEQ15_12950 PF05195 Aminopeptidase P, N-terminal domain JEQ15_12955 PF03695 Uncharacterised protein family (UPF0149) JEQ15_12960 PF05164 Cell division protein ZapA JEQ15_12970 PF01812 5-formyltetrahydrofolate cyclo-ligase family JEQ15_12975 PF03412 Peptidase C39 family JEQ15_12975 PF00664 ABC transporter transmembrane region JEQ15_12975 PF00005 ABC transporter JEQ15_12985 PF03412 Peptidase C39 family JEQ15_12985 PF00664 ABC transporter transmembrane region JEQ15_12985 PF00005 ABC transporter JEQ15_12990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JEQ15_12990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JEQ15_12990 PF01842 ACT domain JEQ15_12995 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JEQ15_13000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_13000 PF03466 LysR substrate binding domain JEQ15_13015 PF04402 Protein of unknown function (DUF541) JEQ15_13020 PF01810 LysE type translocator JEQ15_13025 PF05552 Conserved TM helix JEQ15_13025 PF00924 Mechanosensitive ion channel JEQ15_13030 PF06062 Uncharacterised protein family (UPF0231) JEQ15_13035 PF00330 Aconitase family (aconitate hydratase) JEQ15_13035 PF06434 Aconitate hydratase 2 N-terminus JEQ15_13035 PF11791 Aconitate B N-terminal domain JEQ15_13055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JEQ15_13055 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_13060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JEQ15_13060 PF00364 Biotin-requiring enzyme JEQ15_13060 PF02817 e3 binding domain JEQ15_13065 PF00456 Transketolase, thiamine diphosphate binding domain JEQ15_13065 PF17831 Pyruvate dehydrogenase E1 component middle domain JEQ15_13070 PF00392 Bacterial regulatory proteins, gntR family JEQ15_13070 PF07729 FCD domain JEQ15_13075 PF01510 N-acetylmuramoyl-L-alanine amidase JEQ15_13080 PF07963 Prokaryotic N-terminal methylation motif JEQ15_13085 PF00437 Type II/IV secretion system protein JEQ15_13085 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JEQ15_13090 PF00482 Type II secretion system (T2SS), protein F JEQ15_13095 PF01121 Dephospho-CoA kinase JEQ15_13100 PF07072 Cell division protein JEQ15_13105 PF03884 DNA gyrase inhibitor YacG JEQ15_13110 PF00293 NUDIX domain JEQ15_13115 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JEQ15_13115 PF17287 POTRA domain JEQ15_13115 PF08479 POTRA domain, ShlB-type JEQ15_13120 PF13332 Hemagglutinin repeat JEQ15_13120 PF05860 haemagglutination activity domain JEQ15_13125 PF00403 Heavy-metal-associated domain JEQ15_13130 PF00376 MerR family regulatory protein JEQ15_13130 PF09278 MerR, DNA binding JEQ15_13135 PF02810 SEC-C motif JEQ15_13135 PF07517 SecA DEAD-like domain JEQ15_13135 PF07516 SecA Wing and Scaffold domain JEQ15_13135 PF01043 SecA preprotein cross-linking domain JEQ15_13140 PF06558 Secretion monitor precursor protein (SecM) JEQ15_13150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JEQ15_13155 PF12327 FtsZ family, C-terminal domain JEQ15_13155 PF00091 Tubulin/FtsZ family, GTPase domain JEQ15_13160 PF02491 SHS2 domain inserted in FTSA JEQ15_13165 PF08478 POTRA domain, FtsQ-type JEQ15_13165 PF03799 Cell division protein FtsQ JEQ15_13175 PF01225 Mur ligase family, catalytic domain JEQ15_13175 PF02875 Mur ligase family, glutamate ligase domain JEQ15_13175 PF08245 Mur ligase middle domain JEQ15_13180 PF03033 Glycosyltransferase family 28 N-terminal domain JEQ15_13180 PF04101 Glycosyltransferase family 28 C-terminal domain JEQ15_13185 PF01098 Cell cycle protein JEQ15_13190 PF08245 Mur ligase middle domain JEQ15_13190 PF02875 Mur ligase family, glutamate ligase domain JEQ15_13195 PF00953 Glycosyl transferase family 4 JEQ15_13195 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JEQ15_13200 PF08245 Mur ligase middle domain JEQ15_13200 PF02875 Mur ligase family, glutamate ligase domain JEQ15_13200 PF01225 Mur ligase family, catalytic domain JEQ15_13205 PF02875 Mur ligase family, glutamate ligase domain JEQ15_13205 PF08245 Mur ligase middle domain JEQ15_13205 PF01225 Mur ligase family, catalytic domain JEQ15_13210 PF03717 Penicillin-binding Protein dimerisation domain JEQ15_13210 PF00905 Penicillin binding protein transpeptidase domain JEQ15_13215 PF04999 Cell division protein FtsL JEQ15_13220 PF01795 MraW methylase family JEQ15_13225 PF02381 MraZ protein, putative antitoxin-like JEQ15_13230 PF00356 Bacterial regulatory proteins, lacI family JEQ15_13230 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JEQ15_13235 PF00501 AMP-binding enzyme JEQ15_13240 PF03466 LysR substrate binding domain JEQ15_13240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_13245 PF08502 LeuA allosteric (dimerisation) domain JEQ15_13245 PF00682 HMGL-like JEQ15_13250 PF00180 Isocitrate/isopropylmalate dehydrogenase JEQ15_13255 PF00330 Aconitase family (aconitate hydratase) JEQ15_13260 PF00694 Aconitase C-terminal domain JEQ15_13265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JEQ15_13265 PF12793 Sugar transport-related sRNA regulator N-term JEQ15_13270 PF02976 DNA mismatch repair enzyme MutH JEQ15_13280 PF05973 Phage derived protein Gp49-like (DUF891) JEQ15_13285 PF00106 short chain dehydrogenase JEQ15_13290 PF00491 Arginase family JEQ15_13295 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JEQ15_13295 PF17944 Arginine decarboxylase C-terminal helical extension JEQ15_13295 PF17810 Arginine decarboxylase helical bundle domain JEQ15_13300 PF02773 S-adenosylmethionine synthetase, C-terminal domain JEQ15_13300 PF02772 S-adenosylmethionine synthetase, central domain JEQ15_13300 PF00438 S-adenosylmethionine synthetase, N-terminal domain JEQ15_13305 PF11658 Cellulose biosynthesis protein BcsG JEQ15_13315 PF06564 Cellulose biosynthesis protein BcsQ JEQ15_13320 PF00535 Glycosyl transferase family 2 JEQ15_13320 PF07238 PilZ domain JEQ15_13325 PF03170 Bacterial cellulose synthase subunit JEQ15_13330 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JEQ15_13340 PF04143 Sulphur transport JEQ15_13350 PF10263 SprT-like family JEQ15_13350 PF17283 SprT-like zinc ribbon domain JEQ15_13355 PF00571 CBS domain JEQ15_13355 PF01769 Divalent cation transporter JEQ15_13355 PF03448 MgtE intracellular N domain JEQ15_13365 PF00970 Oxidoreductase FAD-binding domain JEQ15_13365 PF00111 2Fe-2S iron-sulfur cluster binding domain JEQ15_13365 PF00175 Oxidoreductase NAD-binding domain JEQ15_13370 PF03063 Prismane/CO dehydrogenase family JEQ15_13375 PF00171 Aldehyde dehydrogenase family JEQ15_13380 PF01235 Sodium:alanine symporter family JEQ15_13385 PF00654 Voltage gated chloride channel JEQ15_13390 PF09313 Domain of unknown function (DUF1971) JEQ15_13390 PF03848 Tellurite resistance protein TehB JEQ15_13395 PF07885 Ion channel JEQ15_13395 PF02254 TrkA-N domain JEQ15_13400 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JEQ15_13405 PF04264 YceI-like domain JEQ15_13410 PF01292 Prokaryotic cytochrome b561 JEQ15_13420 PF05658 Head domain of trimeric autotransporter adhesin JEQ15_13420 PF03895 YadA-like membrane anchor domain JEQ15_13420 PF13018 Extended Signal Peptide of Type V secretion system JEQ15_13420 PF05662 Coiled stalk of trimeric autotransporter adhesin JEQ15_13430 PF00884 Sulfatase JEQ15_13445 PF09093 Lyase, catalytic JEQ15_13445 PF02278 Polysaccharide lyase family 8, super-sandwich domain JEQ15_13445 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain JEQ15_13445 PF09092 Lyase, N terminal JEQ15_13450 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain JEQ15_13450 PF02278 Polysaccharide lyase family 8, super-sandwich domain JEQ15_13450 PF09093 Lyase, catalytic JEQ15_13450 PF09092 Lyase, N terminal JEQ15_13455 PF07470 Glycosyl Hydrolase Family 88 JEQ15_13465 PF04962 KduI/IolB family JEQ15_13470 PF01979 Amidohydrolase family JEQ15_13475 PF03610 PTS system fructose IIA component JEQ15_13475 PF03830 PTS system sorbose subfamily IIB component JEQ15_13480 PF03613 PTS system mannose/fructose/sorbose family IID component JEQ15_13485 PF03609 PTS system sorbose-specific iic component JEQ15_13490 PF03830 PTS system sorbose subfamily IIB component JEQ15_13495 PF01380 SIS domain JEQ15_13500 PF08013 Tagatose 6 phosphate kinase JEQ15_13505 PF00455 DeoR C terminal sensor domain JEQ15_13505 PF08220 DeoR-like helix-turn-helix domain JEQ15_13510 PF04055 Radical SAM superfamily JEQ15_13510 PF13186 Iron-sulfur cluster-binding domain JEQ15_13515 PF00884 Sulfatase JEQ15_13525 PF01116 Fructose-bisphosphate aldolase class-II JEQ15_13530 PF00294 pfkB family carbohydrate kinase JEQ15_13535 PF01081 KDPG and KHG aldolase JEQ15_13545 PF01266 FAD dependent oxidoreductase JEQ15_13550 PF02567 Phenazine biosynthesis-like protein JEQ15_13555 PF02040 Arsenical pump membrane protein JEQ15_13560 PF01022 Bacterial regulatory protein, arsR family JEQ15_13565 PF04229 GrpB protein JEQ15_13585 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JEQ15_13585 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JEQ15_13595 PF00294 pfkB family carbohydrate kinase JEQ15_13600 PF09190 DALR domain JEQ15_13600 PF01406 tRNA synthetases class I (C) catalytic domain JEQ15_13605 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JEQ15_13610 PF00149 Calcineurin-like phosphoesterase JEQ15_13615 PF00731 AIR carboxylase JEQ15_13620 PF02222 ATP-grasp domain JEQ15_13620 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JEQ15_13630 PF00924 Mechanosensitive ion channel JEQ15_13640 PF00005 ABC transporter JEQ15_13645 PF13472 GDSL-like Lipase/Acylhydrolase family JEQ15_13650 PF00106 short chain dehydrogenase JEQ15_13655 PF00085 Thioredoxin JEQ15_13660 PF16200 C-terminal region of band_7 JEQ15_13660 PF01145 SPFH domain / Band 7 family JEQ15_13670 PF13411 MerR HTH family regulatory protein JEQ15_13675 PF00403 Heavy-metal-associated domain JEQ15_13690 PF01963 TraB family JEQ15_13695 PF04073 Aminoacyl-tRNA editing domain JEQ15_13700 PF02872 5'-nucleotidase, C-terminal domain JEQ15_13700 PF00149 Calcineurin-like phosphoesterase JEQ15_13705 PF00999 Sodium/hydrogen exchanger family JEQ15_13705 PF02254 TrkA-N domain JEQ15_13710 PF00294 pfkB family carbohydrate kinase JEQ15_13715 PF02706 Chain length determinant protein JEQ15_13720 PF00762 Ferrochelatase JEQ15_13725 PF05191 Adenylate kinase, active site lid JEQ15_13730 PF00183 Hsp90 protein JEQ15_13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_13735 PF02222 ATP-grasp domain JEQ15_13740 PF00892 EamA-like transporter family JEQ15_13745 PF00294 pfkB family carbohydrate kinase JEQ15_13750 PF08244 Glycosyl hydrolases family 32 C terminal JEQ15_13750 PF00251 Glycosyl hydrolases family 32 N-terminal domain JEQ15_13755 PF00356 Bacterial regulatory proteins, lacI family JEQ15_13755 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JEQ15_13760 PF00196 Bacterial regulatory proteins, luxR family JEQ15_13760 PF00072 Response regulator receiver domain JEQ15_13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_13785 PF03466 LysR substrate binding domain JEQ15_13795 PF00696 Amino acid kinase family JEQ15_13800 PF11392 Protein of unknown function (DUF2877) JEQ15_13805 PF06545 Protein of unknown function (DUF1116) JEQ15_13810 PF02629 CoA binding domain JEQ15_13810 PF00549 CoA-ligase JEQ15_13815 PF00857 Isochorismatase family JEQ15_13820 PF02678 Pirin JEQ15_13820 PF05726 Pirin C-terminal cupin domain JEQ15_13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_13825 PF03466 LysR substrate binding domain JEQ15_13830 PF00939 Sodium:sulfate symporter transmembrane region JEQ15_13860 PF13953 PapC C-terminal domain JEQ15_13860 PF13954 PapC N-terminal domain JEQ15_13860 PF00577 Outer membrane usher protein JEQ15_13865 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_13865 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_13870 PF00419 Fimbrial protein JEQ15_13890 PF00419 Fimbrial protein JEQ15_13900 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_13900 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_13905 PF13953 PapC C-terminal domain JEQ15_13905 PF13954 PapC N-terminal domain JEQ15_13905 PF00577 Outer membrane usher protein JEQ15_13915 PF00419 Fimbrial protein JEQ15_13920 PF01381 Helix-turn-helix JEQ15_13925 PF02811 PHP domain JEQ15_13930 PF00367 phosphotransferase system, EIIB JEQ15_13930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JEQ15_13930 PF02378 Phosphotransferase system, EIIC JEQ15_13935 PF03123 CAT RNA binding domain JEQ15_13935 PF00874 PRD domain JEQ15_13940 PF13673 Acetyltransferase (GNAT) domain JEQ15_13945 PF02661 Fic/DOC family JEQ15_13975 PF01624 MutS domain I JEQ15_13975 PF05188 MutS domain II JEQ15_13975 PF05192 MutS domain III JEQ15_13975 PF05190 MutS family domain IV JEQ15_13975 PF00488 MutS domain V JEQ15_13980 PF00140 Sigma-70 factor, region 1.2 JEQ15_13980 PF04542 Sigma-70 region 2 JEQ15_13980 PF04539 Sigma-70 region 3 JEQ15_13980 PF04545 Sigma-70, region 4 JEQ15_13985 PF01476 LysM domain JEQ15_13985 PF01551 Peptidase family M23 JEQ15_13995 PF01975 Survival protein SurE JEQ15_14000 PF01142 tRNA pseudouridine synthase D (TruD) JEQ15_14005 PF02542 YgbB family JEQ15_14010 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JEQ15_14015 PF04977 Septum formation initiator JEQ15_14025 PF00009 Elongation factor Tu GTP binding domain JEQ15_14030 PF01507 Phosphoadenosine phosphosulfate reductase family JEQ15_14035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JEQ15_14035 PF10414 Sirohaem synthase dimerisation region JEQ15_14035 PF14824 Sirohaem biosynthesis protein central JEQ15_14040 PF01507 Phosphoadenosine phosphosulfate reductase family JEQ15_14045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JEQ15_14045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JEQ15_14050 PF00175 Oxidoreductase NAD-binding domain JEQ15_14050 PF00258 Flavodoxin JEQ15_14050 PF00667 FAD binding domain JEQ15_14055 PF01242 6-pyruvoyl tetrahydropterin synthase JEQ15_14060 PF04055 Radical SAM superfamily JEQ15_14065 PF00324 Amino acid permease JEQ15_14070 PF01053 Cys/Met metabolism PLP-dependent enzyme JEQ15_14085 PF03372 Endonuclease/Exonuclease/phosphatase family JEQ15_14120 PF09383 NIL domain JEQ15_14120 PF00005 ABC transporter JEQ15_14125 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_14130 PF03180 NLPA lipoprotein JEQ15_14140 PF01980 tRNA-methyltransferase O JEQ15_14140 PF18389 TrmO C-terminal domain JEQ15_14145 PF03129 Anticodon binding domain JEQ15_14145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JEQ15_14145 PF04073 Aminoacyl-tRNA editing domain JEQ15_14150 PF04170 NlpE N-terminal domain JEQ15_14150 PF17185 NlpE C-terminal OB domain JEQ15_14155 PF07073 Modulator of Rho-dependent transcription termination (ROF) JEQ15_14160 PF01171 PP-loop family JEQ15_14160 PF09179 TilS substrate binding domain JEQ15_14160 PF11734 TilS substrate C-terminal domain JEQ15_14170 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JEQ15_14175 PF07733 Bacterial DNA polymerase III alpha NTPase domain JEQ15_14175 PF02811 PHP domain JEQ15_14175 PF01336 OB-fold nucleic acid binding domain JEQ15_14175 PF14579 Helix-hairpin-helix motif JEQ15_14175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JEQ15_14180 PF01351 Ribonuclease HII JEQ15_14185 PF02684 Lipid-A-disaccharide synthetase JEQ15_14190 PF00132 Bacterial transferase hexapeptide (six repeats) JEQ15_14190 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JEQ15_14195 PF07977 FabA-like domain JEQ15_14200 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JEQ15_14200 PF00132 Bacterial transferase hexapeptide (six repeats) JEQ15_14205 PF03938 Outer membrane protein (OmpH-like) JEQ15_14210 PF07244 Surface antigen variable number repeat JEQ15_14210 PF01103 Surface antigen JEQ15_14215 PF17820 PDZ domain JEQ15_14215 PF02163 Peptidase family M50 JEQ15_14225 PF01255 Putative undecaprenyl diphosphate synthase JEQ15_14230 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JEQ15_14230 PF13288 DXP reductoisomerase C-terminal domain JEQ15_14230 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JEQ15_14235 PF01765 Ribosome recycling factor JEQ15_14240 PF00696 Amino acid kinase family JEQ15_14245 PF00889 Elongation factor TS JEQ15_14250 PF00318 Ribosomal protein S2 JEQ15_14255 PF00557 Metallopeptidase family M24 JEQ15_14260 PF01842 ACT domain JEQ15_14260 PF08335 GlnD PII-uridylyltransferase JEQ15_14260 PF01966 HD domain JEQ15_14265 PF14602 Hexapeptide repeat of succinyl-transferase JEQ15_14265 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JEQ15_14270 PF11944 Protein of unknown function (DUF3461) JEQ15_14275 PF00258 Flavodoxin JEQ15_14290 PF00367 phosphotransferase system, EIIB JEQ15_14290 PF02378 Phosphotransferase system, EIIC JEQ15_14295 PF04287 tRNA pseudouridine synthase C JEQ15_14295 PF00849 RNA pseudouridylate synthase JEQ15_14300 PF04287 tRNA pseudouridine synthase C JEQ15_14305 PF07348 Syd protein (SUKH-2) JEQ15_14310 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JEQ15_14310 PF14489 QueF-like protein JEQ15_14315 PF11892 Domain of unknown function (DUF3412) JEQ15_14315 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JEQ15_14315 PF03641 Possible lysine decarboxylase JEQ15_14320 PF01367 5'-3' exonuclease, C-terminal SAM fold JEQ15_14320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JEQ15_14325 PF18125 RlmM ferredoxin-like domain JEQ15_14325 PF01728 FtsJ-like methyltransferase JEQ15_14330 PF04241 Protein of unknown function (DUF423) JEQ15_14335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_14335 PF03466 LysR substrate binding domain JEQ15_14340 PF00266 Aminotransferase class-V JEQ15_14345 PF02657 Fe-S metabolism associated domain JEQ15_14350 PF00899 ThiF family JEQ15_14355 PF06725 3D domain JEQ15_14355 PF03562 MltA specific insert domain JEQ15_14375 PF01520 N-acetylmuramoyl-L-alanine amidase JEQ15_14375 PF11741 AMIN domain JEQ15_14380 PF00696 Amino acid kinase family JEQ15_14380 PF00583 Acetyltransferase (GNAT) family JEQ15_14385 PF13538 UvrD-like helicase C-terminal domain JEQ15_14390 PF12705 PD-(D/E)XK nuclease superfamily JEQ15_14390 PF00580 UvrD/REP helicase N-terminal domain JEQ15_14390 PF13361 UvrD-like helicase C-terminal domain JEQ15_14395 PF00675 Insulinase (Peptidase family M16) JEQ15_14395 PF05193 Peptidase M16 inactive domain JEQ15_14395 PF16187 Middle or third domain of peptidase_M16 JEQ15_14400 PF17946 RecC C-terminal domain JEQ15_14430 PF00303 Thymidylate synthase JEQ15_14435 PF01790 Prolipoprotein diacylglyceryl transferase JEQ15_14440 PF02896 PEP-utilising enzyme, TIM barrel domain JEQ15_14440 PF05524 PEP-utilising enzyme, N-terminal JEQ15_14440 PF01590 GAF domain JEQ15_14440 PF00391 PEP-utilising enzyme, mobile domain JEQ15_14445 PF00293 NUDIX domain JEQ15_14455 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_14460 PF00005 ABC transporter JEQ15_14465 PF12728 Helix-turn-helix domain JEQ15_14475 PF03104 DNA polymerase family B, exonuclease domain JEQ15_14475 PF00136 DNA polymerase family B JEQ15_14480 PF00271 Helicase conserved C-terminal domain JEQ15_14480 PF12137 RNA polymerase recycling family C-terminal JEQ15_14480 PF00176 SNF2 family N-terminal domain JEQ15_14480 PF18339 RapA N-terminal Tudor like domain 1 JEQ15_14480 PF18337 RapA N-terminal Tudor like domain JEQ15_14485 PF00849 RNA pseudouridylate synthase JEQ15_14490 PF00226 DnaJ domain JEQ15_14490 PF05099 Tellurite resistance protein TerB JEQ15_14495 PF03968 OstA-like protein JEQ15_14495 PF04453 LPS transport system D JEQ15_14500 PF09312 SurA N-terminal domain JEQ15_14505 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JEQ15_14510 PF00398 Ribosomal RNA adenine dimethylase JEQ15_14515 PF04379 ApaG domain JEQ15_14520 PF00149 Calcineurin-like phosphoesterase JEQ15_14525 PF00186 Dihydrofolate reductase JEQ15_14535 PF00082 Subtilase family JEQ15_14535 PF03797 Autotransporter beta-domain JEQ15_14535 PF12951 Passenger-associated-transport-repeat JEQ15_14540 PF07731 Multicopper oxidase JEQ15_14540 PF07732 Multicopper oxidase JEQ15_14545 PF01553 Acyltransferase JEQ15_14550 PF00521 DNA gyrase/topoisomerase IV, subunit A JEQ15_14550 PF03989 DNA gyrase C-terminal domain, beta-propeller JEQ15_14555 PF00204 DNA gyrase B JEQ15_14555 PF01751 Toprim domain JEQ15_14555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_14555 PF00986 DNA gyrase B subunit, carboxyl terminus JEQ15_14560 PF05728 Uncharacterised protein family (UPF0227) JEQ15_14565 PF00149 Calcineurin-like phosphoesterase JEQ15_14570 PF00293 NUDIX domain JEQ15_14575 PF02321 Outer membrane efflux protein JEQ15_14580 PF06693 Protein of unknown function (DUF1190) JEQ15_14585 PF03738 Glutathionylspermidine synthase preATP-grasp JEQ15_14590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JEQ15_14595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JEQ15_14600 PF04380 Membrane fusogenic activity JEQ15_14615 PF00294 pfkB family carbohydrate kinase JEQ15_14615 PF01467 Cytidylyltransferase-like JEQ15_14620 PF08335 GlnD PII-uridylyltransferase JEQ15_14620 PF03710 Glutamate-ammonia ligase adenylyltransferase JEQ15_14625 PF01928 CYTH domain JEQ15_14630 PF08239 Bacterial SH3 domain JEQ15_14635 PF01743 Poly A polymerase head domain JEQ15_14635 PF01966 HD domain JEQ15_14635 PF12627 Probable RNA and SrmB- binding site of polymerase A JEQ15_14640 PF02152 Dihydroneopterin aldolase JEQ15_14645 PF02660 Glycerol-3-phosphate acyltransferase JEQ15_14665 PF01474 Class-II DAHP synthetase family JEQ15_14670 PF00814 Glycoprotease family JEQ15_14675 PF01165 Ribosomal protein S21 JEQ15_14680 PF08275 DNA primase catalytic core, N-terminal domain JEQ15_14680 PF10410 DnaB-helicase binding domain of primase JEQ15_14680 PF08278 DNA primase DnaG DnaB-binding JEQ15_14680 PF01807 CHC2 zinc finger JEQ15_14685 PF04542 Sigma-70 region 2 JEQ15_14685 PF04539 Sigma-70 region 3 JEQ15_14685 PF04545 Sigma-70, region 4 JEQ15_14685 PF00140 Sigma-70 factor, region 1.2 JEQ15_14685 PF03979 Sigma-70 factor, region 1.1 JEQ15_14685 PF04546 Sigma-70, non-essential region JEQ15_14710 PF06508 Queuosine biosynthesis protein QueC JEQ15_14730 PF01062 Bestrophin, RFP-TM, chloride channel JEQ15_14740 PF02322 Cytochrome bd terminal oxidase subunit II JEQ15_14745 PF01654 Cytochrome bd terminal oxidase subunit I JEQ15_14750 PF00384 Molybdopterin oxidoreductase JEQ15_14755 PF03466 LysR substrate binding domain JEQ15_14755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_14760 PF00672 HAMP domain JEQ15_14760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JEQ15_14760 PF02203 Tar ligand binding domain homologue JEQ15_14765 PF00672 HAMP domain JEQ15_14765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JEQ15_14765 PF02203 Tar ligand binding domain homologue JEQ15_14775 PF02342 TerD domain JEQ15_14780 PF02342 TerD domain JEQ15_14785 PF03741 Integral membrane protein TerC family JEQ15_14790 PF05099 Tellurite resistance protein TerB JEQ15_14795 PF02342 TerD domain JEQ15_14800 PF02342 TerD domain JEQ15_14815 PF11202 Phosphoribosyl transferase (PRTase) JEQ15_14815 PF15608 PELOTA RNA binding domain JEQ15_14850 PF02909 Tetracyclin repressor-like, C-terminal domain JEQ15_14850 PF00440 Bacterial regulatory proteins, tetR family JEQ15_14855 PF07690 Major Facilitator Superfamily JEQ15_14870 PF02733 Dak1 domain JEQ15_14875 PF02734 DAK2 domain JEQ15_14880 PF00381 PTS HPr component phosphorylation site JEQ15_14880 PF03610 PTS system fructose IIA component JEQ15_14880 PF05524 PEP-utilising enzyme, N-terminal JEQ15_14880 PF00391 PEP-utilising enzyme, mobile domain JEQ15_14885 PF02954 Bacterial regulatory protein, Fis family JEQ15_14885 PF00072 Response regulator receiver domain JEQ15_14885 PF14532 Sigma-54 interaction domain JEQ15_14890 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_14890 PF02743 Cache domain JEQ15_14900 PF07690 Major Facilitator Superfamily JEQ15_14905 PF00224 Pyruvate kinase, barrel domain JEQ15_14905 PF02887 Pyruvate kinase, alpha/beta domain JEQ15_14910 PF01258 Prokaryotic dksA/traR C4-type zinc finger JEQ15_14915 PF00282 Pyridoxal-dependent decarboxylase conserved domain JEQ15_14920 PF03600 Citrate transporter JEQ15_14925 PF01048 Phosphorylase superfamily JEQ15_14930 PF01676 Metalloenzyme superfamily JEQ15_14935 PF02885 Glycosyl transferase family, helical bundle domain JEQ15_14935 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JEQ15_14935 PF00591 Glycosyl transferase family, a/b domain JEQ15_14940 PF01791 DeoC/LacD family aldolase JEQ15_14945 PF07662 Na+ dependent nucleoside transporter C-terminus JEQ15_14945 PF01773 Na+ dependent nucleoside transporter N-terminus JEQ15_14945 PF07670 Nucleoside recognition JEQ15_14950 PF01026 TatD related DNase JEQ15_14955 PF01734 Patatin-like phospholipase JEQ15_14965 PF00009 Elongation factor Tu GTP binding domain JEQ15_14965 PF03144 Elongation factor Tu domain 2 JEQ15_14965 PF16658 Class II release factor RF3, C-terminal domain JEQ15_14970 PF01381 Helix-turn-helix JEQ15_14970 PF00717 Peptidase S24-like JEQ15_15010 PF00403 Heavy-metal-associated domain JEQ15_15010 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_15010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JEQ15_15015 PF03203 MerC mercury resistance protein JEQ15_15020 PF00403 Heavy-metal-associated domain JEQ15_15025 PF02411 MerT mercuric transport protein JEQ15_15030 PF09278 MerR, DNA binding JEQ15_15030 PF00376 MerR family regulatory protein JEQ15_15040 PF06122 Conjugative relaxosome accessory transposon protein JEQ15_15065 PF04002 RadC-like JAB domain JEQ15_15070 PF00092 von Willebrand factor type A domain JEQ15_15090 PF07728 AAA domain (dynein-related subfamily) JEQ15_15090 PF08406 CbbQ/NirQ/NorQ C-terminal JEQ15_15110 PF00436 Single-strand binding protein family JEQ15_15135 PF06986 Type-1V conjugative transfer system mating pair stabilisation JEQ15_15140 PF06834 TraU protein JEQ15_15150 PF10502 Signal peptidase, peptidase S26 JEQ15_15165 PF13098 Thioredoxin-like domain JEQ15_15165 PF10411 Disulfide bond isomerase protein N-terminus JEQ15_15210 PF05973 Phage derived protein Gp49-like (DUF891) JEQ15_15245 PF00271 Helicase conserved C-terminal domain JEQ15_15245 PF00176 SNF2 family N-terminal domain JEQ15_15275 PF14480 DNA polymerase III polC-type N-terminus I JEQ15_15275 PF11490 DNA polymerase III polC-type N-terminus II JEQ15_15275 PF07733 Bacterial DNA polymerase III alpha NTPase domain JEQ15_15275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JEQ15_15275 PF14579 Helix-hairpin-helix motif JEQ15_15275 PF02811 PHP domain JEQ15_15275 PF00929 Exonuclease JEQ15_15310 PF11799 impB/mucB/samB family C-terminal domain JEQ15_15310 PF00817 impB/mucB/samB family JEQ15_15310 PF13438 Domain of unknown function (DUF4113) JEQ15_15350 PF00529 HlyD membrane-fusion protein of T1SS JEQ15_15350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JEQ15_15355 PF00873 AcrB/AcrD/AcrF family JEQ15_15360 PF02321 Outer membrane efflux protein JEQ15_15400 PF00009 Elongation factor Tu GTP binding domain JEQ15_15400 PF03144 Elongation factor Tu domain 2 JEQ15_15400 PF16658 Class II release factor RF3, C-terminal domain JEQ15_15415 PF00583 Acetyltransferase (GNAT) family JEQ15_15425 PF08468 Methyltransferase small domain N-terminal JEQ15_15425 PF05175 Methyltransferase small domain JEQ15_15440 PF02690 Na+/Pi-cotransporter JEQ15_15445 PF00245 Alkaline phosphatase JEQ15_15450 PF01385 Probable transposase JEQ15_15450 PF07282 Putative transposase DNA-binding domain JEQ15_15450 PF12323 Helix-turn-helix domain JEQ15_15455 PF01797 Transposase IS200 like JEQ15_15460 PF11806 Domain of unknown function (DUF3327) JEQ15_15460 PF00756 Putative esterase JEQ15_15470 PF13521 AAA domain JEQ15_15470 PF01381 Helix-turn-helix JEQ15_15475 PF18073 Rubredoxin metal binding domain JEQ15_15480 PF18429 Domain of unknown function (DUF5609) JEQ15_15485 PF10144 Bacterial virulence factor haemolysin JEQ15_15490 PF11230 Protein of unknown function (DUF3029) JEQ15_15495 PF04055 Radical SAM superfamily JEQ15_15505 PF00005 ABC transporter JEQ15_15510 PF00005 ABC transporter JEQ15_15515 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_15515 PF12911 N-terminal TM domain of oligopeptide transport permease C JEQ15_15520 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_15525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JEQ15_15530 PF00535 Glycosyl transferase family 2 JEQ15_15535 PF01750 Hydrogenase maturation protease JEQ15_15540 PF07450 Formate hydrogenlyase maturation protein HycH JEQ15_15545 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JEQ15_15550 PF12838 4Fe-4S dicluster domain JEQ15_15555 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JEQ15_15555 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JEQ15_15555 PF00374 Nickel-dependent hydrogenase JEQ15_15560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JEQ15_15560 PF00361 Proton-conducting membrane transporter JEQ15_15565 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JEQ15_15570 PF00361 Proton-conducting membrane transporter JEQ15_15570 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JEQ15_15575 PF00146 NADH dehydrogenase JEQ15_15580 PF00361 Proton-conducting membrane transporter JEQ15_15585 PF12798 4Fe-4S binding domain JEQ15_15585 PF00037 4Fe-4S binding domain JEQ15_15590 PF02502 Ribose/Galactose Isomerase JEQ15_15595 PF01132 Elongation factor P (EF-P) OB domain JEQ15_15595 PF08207 Elongation factor P (EF-P) KOW-like domain JEQ15_15595 PF09285 Elongation factor P, C-terminal JEQ15_15600 PF04055 Radical SAM superfamily JEQ15_15615 PF00577 Outer membrane usher protein JEQ15_15615 PF13954 PapC N-terminal domain JEQ15_15615 PF13953 PapC C-terminal domain JEQ15_15620 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_15620 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_15625 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_15625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_15640 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_15640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_15650 PF13460 NAD(P)H-binding JEQ15_15655 PF13698 Domain of unknown function (DUF4156) JEQ15_15665 PF00118 TCP-1/cpn60 chaperonin family JEQ15_15670 PF00166 Chaperonin 10 Kd subunit JEQ15_15675 PF04186 FxsA cytoplasmic membrane protein JEQ15_15680 PF00206 Lyase JEQ15_15680 PF10415 Fumarase C C-terminus JEQ15_15685 PF03605 Anaerobic c4-dicarboxylate membrane transporter JEQ15_15705 PF04536 TPM domain JEQ15_15710 PF04011 LemA family JEQ15_15725 PF17864 RuvB AAA lid domain JEQ15_15725 PF05491 RuvB C-terminal winged helix domain JEQ15_15725 PF05496 Holliday junction DNA helicase RuvB P-loop domain JEQ15_15730 PF02311 AraC-like ligand binding domain JEQ15_15730 PF12833 Helix-turn-helix domain JEQ15_15740 PF01494 FAD binding domain JEQ15_15745 PF00766 Electron transfer flavoprotein FAD-binding domain JEQ15_15745 PF01012 Electron transfer flavoprotein domain JEQ15_15750 PF01012 Electron transfer flavoprotein domain JEQ15_15755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JEQ15_15755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JEQ15_15755 PF02770 Acyl-CoA dehydrogenase, middle domain JEQ15_15765 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JEQ15_15770 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JEQ15_15775 PF01869 BadF/BadG/BcrA/BcrD ATPase family JEQ15_15780 PF02515 CoA-transferase family III JEQ15_15785 PF13193 AMP-binding enzyme C-terminal domain JEQ15_15785 PF00501 AMP-binding enzyme JEQ15_15790 PF00083 Sugar (and other) transporter JEQ15_15800 PF01494 FAD binding domain JEQ15_15805 PF00766 Electron transfer flavoprotein FAD-binding domain JEQ15_15805 PF01012 Electron transfer flavoprotein domain JEQ15_15810 PF01012 Electron transfer flavoprotein domain JEQ15_15815 PF02028 BCCT, betaine/carnitine/choline family transporter JEQ15_15820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JEQ15_15820 PF02770 Acyl-CoA dehydrogenase, middle domain JEQ15_15820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JEQ15_15825 PF02515 CoA-transferase family III JEQ15_15830 PF00501 AMP-binding enzyme JEQ15_15830 PF13193 AMP-binding enzyme C-terminal domain JEQ15_15835 PF00378 Enoyl-CoA hydratase/isomerase JEQ15_15840 PF00132 Bacterial transferase hexapeptide (six repeats) JEQ15_15845 PF07180 CaiF/GrlA transcriptional regulator JEQ15_15850 PF00923 Transaldolase/Fructose-6-phosphate aldolase JEQ15_15855 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JEQ15_15855 PF18416 N-acetylglucosamine binding protein domain 2 JEQ15_15860 PF02631 RecX family JEQ15_15880 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JEQ15_15885 PF03062 MBOAT, membrane-bound O-acyltransferase family JEQ15_15905 PF02447 GntP family permease JEQ15_15910 PF01202 Shikimate kinase JEQ15_15915 PF00356 Bacterial regulatory proteins, lacI family JEQ15_15915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JEQ15_15920 PF01497 Periplasmic binding protein JEQ15_15925 PF01032 FecCD transport family JEQ15_15930 PF00005 ABC transporter JEQ15_15935 PF13649 Methyltransferase domain JEQ15_15940 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JEQ15_15940 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JEQ15_15965 PF07720 Tetratricopeptide repeat JEQ15_15970 PF01312 FlhB HrpN YscU SpaS Family JEQ15_15975 PF01311 Bacterial export proteins, family 1 JEQ15_15980 PF01313 Bacterial export proteins, family 3 JEQ15_15985 PF00813 FliP family JEQ15_16005 PF02874 ATP synthase alpha/beta family, beta-barrel domain JEQ15_16005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JEQ15_16005 PF18269 T3SS EscN ATPase C-terminal domain JEQ15_16015 PF00771 FHIPEP family JEQ15_16020 PF07201 HrpJ-like domain JEQ15_16025 PF00263 Bacterial type II and III secretion system protein JEQ15_16025 PF03958 Bacterial type II/III secretion system short domain JEQ15_16030 PF12833 Helix-turn-helix domain JEQ15_16040 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF JEQ15_16050 PF01514 Secretory protein of YscJ/FliF family JEQ15_16070 PF09278 MerR, DNA binding JEQ15_16070 PF00376 MerR family regulatory protein JEQ15_16085 PF00873 AcrB/AcrD/AcrF family JEQ15_16095 PF00893 Small Multidrug Resistance protein JEQ15_16100 PF00893 Small Multidrug Resistance protein JEQ15_16110 PF06130 Phosphate propanoyltransferase JEQ15_16115 PF00936 BMC domain JEQ15_16120 PF13187 4Fe-4S dicluster domain JEQ15_16120 PF04055 Radical SAM superfamily JEQ15_16125 PF01228 Glycine radical JEQ15_16125 PF02901 Pyruvate formate lyase-like JEQ15_16130 PF00465 Iron-containing alcohol dehydrogenase JEQ15_16135 PF03319 Ethanolamine utilisation protein EutN/carboxysome JEQ15_16140 PF00465 Iron-containing alcohol dehydrogenase JEQ15_16140 PF00171 Aldehyde dehydrogenase family JEQ15_16145 PF00936 BMC domain JEQ15_16150 PF00936 BMC domain JEQ15_16155 PF00936 BMC domain JEQ15_16175 PF01053 Cys/Met metabolism PLP-dependent enzyme JEQ15_16180 PF00892 EamA-like transporter family JEQ15_16185 PF00419 Fimbrial protein JEQ15_16190 PF02753 Pili assembly chaperone PapD, C-terminal domain JEQ15_16190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JEQ15_16195 PF13953 PapC C-terminal domain JEQ15_16195 PF00577 Outer membrane usher protein JEQ15_16195 PF13954 PapC N-terminal domain JEQ15_16200 PF00419 Fimbrial protein JEQ15_16205 PF00419 Fimbrial protein JEQ15_16205 PF09222 Fimbrial adhesin F17-AG, lectin domain JEQ15_16210 PF01381 Helix-turn-helix JEQ15_16215 PF13416 Bacterial extracellular solute-binding protein JEQ15_16220 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_16225 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_16230 PF00005 ABC transporter JEQ15_16230 PF08402 TOBE domain JEQ15_16245 PF01207 Dihydrouridine synthase (Dus) JEQ15_16250 PF08240 Alcohol dehydrogenase GroES-like domain JEQ15_16250 PF00107 Zinc-binding dehydrogenase JEQ15_16255 PF00772 DnaB-like helicase N terminal domain JEQ15_16255 PF03796 DnaB-like helicase C terminal domain JEQ15_16260 PF01168 Alanine racemase, N-terminal domain JEQ15_16260 PF00842 Alanine racemase, C-terminal domain JEQ15_16265 PF00155 Aminotransferase class I and II JEQ15_16270 PF03313 Serine dehydratase alpha chain JEQ15_16280 PF00005 ABC transporter JEQ15_16280 PF17755 UvrA DNA-binding domain JEQ15_16280 PF17760 UvrA interaction domain JEQ15_16285 PF00436 Single-strand binding protein family JEQ15_16290 PF01475 Ferric uptake regulator family JEQ15_16295 PF00717 Peptidase S24-like JEQ15_16295 PF01726 LexA DNA binding domain JEQ15_16300 PF01219 Prokaryotic diacylglycerol kinase JEQ15_16305 PF01553 Acyltransferase JEQ15_16310 PF01040 UbiA prenyltransferase family JEQ15_16315 PF04345 Chorismate lyase JEQ15_16320 PF00342 Phosphoglucose isomerase JEQ15_16325 PF00696 Amino acid kinase family JEQ15_16325 PF01842 ACT domain JEQ15_16340 PF02574 Homocysteine S-methyltransferase JEQ15_16340 PF02310 B12 binding domain JEQ15_16340 PF02607 B12 binding domain JEQ15_16340 PF02965 Vitamin B12 dependent methionine synthase, activation domain JEQ15_16340 PF00809 Pterin binding enzyme JEQ15_16345 PF09339 IclR helix-turn-helix domain JEQ15_16345 PF01614 Bacterial transcriptional regulator JEQ15_16350 PF00920 Dehydratase family JEQ15_16355 PF01081 KDPG and KHG aldolase JEQ15_16360 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JEQ15_16365 PF00463 Isocitrate lyase family JEQ15_16370 PF01274 Malate synthase JEQ15_16375 PF04204 Homoserine O-succinyltransferase JEQ15_16380 PF00465 Iron-containing alcohol dehydrogenase JEQ15_16385 PF00293 NUDIX domain JEQ15_16415 PF01808 AICARFT/IMPCHase bienzyme JEQ15_16415 PF02142 MGS-like domain JEQ15_16420 PF02844 Phosphoribosylglycinamide synthetase, N domain JEQ15_16420 PF02843 Phosphoribosylglycinamide synthetase, C domain JEQ15_16420 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JEQ15_16425 PF07356 Protein of unknown function (DUF1481) JEQ15_16430 PF00216 Bacterial DNA-binding protein JEQ15_16435 PF04222 Protein of unknown function (DUF416) JEQ15_16440 PF04493 Endonuclease V JEQ15_16445 PF01208 Uroporphyrinogen decarboxylase (URO-D) JEQ15_16450 PF00293 NUDIX domain JEQ15_16450 PF09297 NADH pyrophosphatase zinc ribbon domain JEQ15_16460 PF13667 ThiC-associated domain JEQ15_16460 PF01964 Radical SAM ThiC family JEQ15_16465 PF02581 Thiamine monophosphate synthase JEQ15_16470 PF00899 ThiF family JEQ15_16475 PF02597 ThiS family JEQ15_16480 PF05690 Thiazole biosynthesis protein ThiG JEQ15_16485 PF04055 Radical SAM superfamily JEQ15_16485 PF06968 Biotin and Thiamin Synthesis associated domain JEQ15_16490 PF04754 Putative transposase, YhgA-like JEQ15_16495 PF00623 RNA polymerase Rpb1, domain 2 JEQ15_16495 PF04983 RNA polymerase Rpb1, domain 3 JEQ15_16495 PF05000 RNA polymerase Rpb1, domain 4 JEQ15_16495 PF04998 RNA polymerase Rpb1, domain 5 JEQ15_16495 PF04997 RNA polymerase Rpb1, domain 1 JEQ15_16500 PF04563 RNA polymerase beta subunit JEQ15_16500 PF04560 RNA polymerase Rpb2, domain 7 JEQ15_16500 PF00562 RNA polymerase Rpb2, domain 6 JEQ15_16500 PF10385 RNA polymerase beta subunit external 1 domain JEQ15_16500 PF04561 RNA polymerase Rpb2, domain 2 JEQ15_16500 PF04565 RNA polymerase Rpb2, domain 3 JEQ15_16505 PF00542 Ribosomal protein L7/L12 C-terminal domain JEQ15_16505 PF16320 Ribosomal protein L7/L12 dimerisation domain JEQ15_16510 PF00466 Ribosomal protein L10 JEQ15_16515 PF00687 Ribosomal protein L1p/L10e family JEQ15_16520 PF00298 Ribosomal protein L11, RNA binding domain JEQ15_16520 PF03946 Ribosomal protein L11, N-terminal domain JEQ15_16525 PF02357 Transcription termination factor nusG JEQ15_16525 PF00467 KOW motif JEQ15_16530 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JEQ15_16535 PF03143 Elongation factor Tu C-terminal domain JEQ15_16535 PF03144 Elongation factor Tu domain 2 JEQ15_16535 PF00009 Elongation factor Tu GTP binding domain JEQ15_16540 PF00679 Elongation factor G C-terminus JEQ15_16540 PF14492 Elongation Factor G, domain II JEQ15_16540 PF03764 Elongation factor G, domain IV JEQ15_16540 PF00009 Elongation factor Tu GTP binding domain JEQ15_16540 PF03144 Elongation factor Tu domain 2 JEQ15_16545 PF00177 Ribosomal protein S7p/S5e JEQ15_16550 PF00164 Ribosomal protein S12/S23 JEQ15_16555 PF04077 DsrH like protein JEQ15_16560 PF02635 DsrE/DsrF-like family JEQ15_16565 PF02635 DsrE/DsrF-like family JEQ15_16570 PF13309 HTH domain JEQ15_16570 PF08348 YheO-like PAS domain JEQ15_16580 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JEQ15_16580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JEQ15_16585 PF04102 SlyX JEQ15_16590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JEQ15_16595 PF09526 Probable metal-binding protein (DUF2387) JEQ15_16600 PF02254 TrkA-N domain JEQ15_16600 PF00999 Sodium/hydrogen exchanger family JEQ15_16605 PF02525 Flavodoxin-like fold JEQ15_16610 PF00005 ABC transporter JEQ15_16610 PF12848 ABC transporter JEQ15_16615 PF02203 Tar ligand binding domain homologue JEQ15_16615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JEQ15_16615 PF00672 HAMP domain JEQ15_16620 PF00672 HAMP domain JEQ15_16620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JEQ15_16620 PF02203 Tar ligand binding domain homologue JEQ15_16625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JEQ15_16625 PF08447 PAS fold JEQ15_16630 PF01380 SIS domain JEQ15_16630 PF01418 Helix-turn-helix domain, rpiR family JEQ15_16640 PF00561 alpha/beta hydrolase fold JEQ15_16645 PF06794 Uncharacterised protein family (UPF0270) JEQ15_16650 PF00485 Phosphoribulokinase / Uridine kinase family JEQ15_16655 PF02566 OsmC-like protein JEQ15_16660 PF00027 Cyclic nucleotide-binding domain JEQ15_16660 PF13545 Crp-like helix-turn-helix domain JEQ15_16665 PF00202 Aminotransferase class-III JEQ15_16670 PF00117 Glutamine amidotransferase class-I JEQ15_16675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JEQ15_16680 PF01926 50S ribosome-binding GTPase JEQ15_16685 PF01327 Polypeptide deformylase JEQ15_16690 PF01367 5'-3' exonuclease, C-terminal SAM fold JEQ15_16690 PF00476 DNA polymerase family A JEQ15_16690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JEQ15_16690 PF01612 3'-5' exonuclease JEQ15_16700 PF01323 DSBA-like thioredoxin domain JEQ15_16705 PF01636 Phosphotransferase enzyme family JEQ15_16710 PF06288 Protein of unknown function (DUF1040) JEQ15_16715 PF12804 MobA-like NTP transferase domain JEQ15_16720 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JEQ15_16730 PF01266 FAD dependent oxidoreductase JEQ15_16735 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_16735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JEQ15_16740 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JEQ15_16750 PF03631 Virulence factor BrkB JEQ15_16755 PF01361 Tautomerase enzyme JEQ15_16760 PF00675 Insulinase (Peptidase family M16) JEQ15_16760 PF05193 Peptidase M16 inactive domain JEQ15_16765 PF00672 HAMP domain JEQ15_16765 PF00563 EAL domain JEQ15_16765 PF17154 Gammaproteobacterial periplasmic sensor domain JEQ15_16765 PF00990 Diguanylate cyclase, GGDEF domain JEQ15_16770 PF04829 Pre-toxin domain with VENN motif JEQ15_16770 PF05594 Haemagluttinin repeat JEQ15_16770 PF13332 Hemagglutinin repeat JEQ15_16770 PF05860 haemagglutination activity domain JEQ15_16770 PF15526 Novel toxin 21 JEQ15_16775 PF00005 ABC transporter JEQ15_16775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JEQ15_16780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JEQ15_16780 PF00005 ABC transporter JEQ15_16785 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_16785 PF12911 N-terminal TM domain of oligopeptide transport permease C JEQ15_16790 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_16795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JEQ15_16800 PF08479 POTRA domain, ShlB-type JEQ15_16800 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JEQ15_16800 PF17287 POTRA domain JEQ15_16815 PF07119 Protein of unknown function (DUF1375) JEQ15_16820 PF02080 TrkA-C domain JEQ15_16820 PF06826 Predicted Permease Membrane Region JEQ15_16825 PF00155 Aminotransferase class I and II JEQ15_16830 PF03352 Methyladenine glycosylase JEQ15_16835 PF02091 Glycyl-tRNA synthetase alpha subunit JEQ15_16840 PF05746 DALR anticodon binding domain JEQ15_16840 PF02092 Glycyl-tRNA synthetase beta subunit JEQ15_16865 PF12566 Protein of unknown function (DUF3748) JEQ15_16865 PF07676 WD40-like Beta Propeller Repeat JEQ15_16870 PF03458 UPF0126 domain JEQ15_16875 PF00625 Guanylate kinase JEQ15_16880 PF01192 RNA polymerase Rpb6 JEQ15_16885 PF13291 ACT domain JEQ15_16885 PF04607 Region found in RelA / SpoT proteins JEQ15_16885 PF02824 TGS domain JEQ15_16890 PF12105 SpoU, rRNA methylase, C-terminal JEQ15_16890 PF00588 SpoU rRNA Methylase family JEQ15_16895 PF00271 Helicase conserved C-terminal domain JEQ15_16895 PF00270 DEAD/DEAH box helicase JEQ15_16895 PF17191 RecG wedge domain JEQ15_16900 PF03616 Sodium/glutamate symporter JEQ15_16905 PF00860 Permease family JEQ15_16915 PF05170 AsmA family JEQ15_16925 PF00849 RNA pseudouridylate synthase JEQ15_16925 PF01479 S4 domain JEQ15_16930 PF09500 Putative thioesterase (yiiD_Cterm) JEQ15_16930 PF00583 Acetyltransferase (GNAT) family JEQ15_16935 PF02580 D-Tyr-tRNA(Tyr) deacylase JEQ15_16940 PF13419 Haloacid dehalogenase-like hydrolase JEQ15_16960 PF03144 Elongation factor Tu domain 2 JEQ15_16960 PF00009 Elongation factor Tu GTP binding domain JEQ15_16960 PF00679 Elongation factor G C-terminus JEQ15_16965 PF00120 Glutamine synthetase, catalytic domain JEQ15_16965 PF03951 Glutamine synthetase, beta-Grasp domain JEQ15_16970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_16970 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_16975 PF02954 Bacterial regulatory protein, Fis family JEQ15_16975 PF00072 Response regulator receiver domain JEQ15_16975 PF00158 Sigma-54 interaction domain JEQ15_16980 PF04055 Radical SAM superfamily JEQ15_16980 PF06969 HemN C-terminal domain JEQ15_16985 PF05643 Putative bacterial lipoprotein (DUF799) JEQ15_16995 PF03783 Curli production assembly/transport component CsgG JEQ15_17000 PF00575 S1 RNA binding domain JEQ15_17000 PF09371 Tex-like protein N-terminal domain JEQ15_17000 PF16921 Tex protein YqgF-like domain JEQ15_17000 PF17674 HHH domain JEQ15_17005 PF01272 Transcription elongation factor, GreA/GreB, C-term JEQ15_17005 PF03449 Transcription elongation factor, N-terminal JEQ15_17010 PF00486 Transcriptional regulatory protein, C terminal JEQ15_17010 PF00072 Response regulator receiver domain JEQ15_17015 PF00512 His Kinase A (phospho-acceptor) domain JEQ15_17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JEQ15_17015 PF00672 HAMP domain JEQ15_17020 PF12849 PBP superfamily domain JEQ15_17025 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_17030 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_17035 PF00005 ABC transporter JEQ15_17040 PF01895 PhoU domain JEQ15_17045 PF00497 Bacterial extracellular solute-binding proteins, family 3 JEQ15_17050 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_17055 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_17080 PF00005 ABC transporter JEQ15_17095 PF00109 Beta-ketoacyl synthase, N-terminal domain JEQ15_17095 PF02801 Beta-ketoacyl synthase, C-terminal domain JEQ15_17100 PF01571 Aminomethyltransferase folate-binding domain JEQ15_17100 PF08669 Glycine cleavage T-protein C-terminal barrel domain JEQ15_17105 PF00550 Phosphopantetheine attachment site JEQ15_17110 PF07977 FabA-like domain JEQ15_17120 PF01648 4'-phosphopantetheinyl transferase superfamily JEQ15_17125 PF04829 Pre-toxin domain with VENN motif JEQ15_17125 PF05860 haemagglutination activity domain JEQ15_17125 PF13332 Hemagglutinin repeat JEQ15_17125 PF05594 Haemagluttinin repeat JEQ15_17125 PF14436 Bacterial EndoU nuclease JEQ15_17130 PF00860 Permease family JEQ15_17135 PF13302 Acetyltransferase (GNAT) domain JEQ15_17145 PF04220 Der GTPase activator (YihI) JEQ15_17155 PF04023 FeoA domain JEQ15_17160 PF07664 Ferrous iron transport protein B C terminus JEQ15_17160 PF07670 Nucleoside recognition JEQ15_17160 PF02421 Ferrous iron transport protein B JEQ15_17160 PF17910 FeoB cytosolic helical domain JEQ15_17165 PF09012 FeoC like transcriptional regulator JEQ15_17175 PF00561 alpha/beta hydrolase fold JEQ15_17180 PF00156 Phosphoribosyl transferase domain JEQ15_17185 PF01106 NifU-like domain JEQ15_17185 PF01521 Iron-sulphur cluster biosynthesis JEQ15_17190 PF00581 Rhodanese-like domain JEQ15_17195 PF01694 Rhomboid family JEQ15_17195 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JEQ15_17200 PF00455 DeoR C terminal sensor domain JEQ15_17200 PF08220 DeoR-like helix-turn-helix domain JEQ15_17205 PF01266 FAD dependent oxidoreductase JEQ15_17205 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JEQ15_17210 PF04343 Protein of unknown function, DUF488 JEQ15_17215 PF02219 Methylenetetrahydrofolate reductase JEQ15_17225 PF00356 Bacterial regulatory proteins, lacI family JEQ15_17230 PF01970 Tripartite tricarboxylate transporter TctA family JEQ15_17240 PF03401 Tripartite tricarboxylate transporter family receptor JEQ15_17250 PF00701 Dihydrodipicolinate synthetase family JEQ15_17260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JEQ15_17260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JEQ15_17270 PF00005 ABC transporter JEQ15_17275 PF00005 ABC transporter JEQ15_17280 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_17280 PF12911 N-terminal TM domain of oligopeptide transport permease C JEQ15_17285 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_17290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JEQ15_17295 PF08241 Methyltransferase domain JEQ15_17295 PF12697 Alpha/beta hydrolase family JEQ15_17305 PF13505 Outer membrane protein beta-barrel domain JEQ15_17310 PF04794 YdjC-like protein JEQ15_17315 PF02056 Family 4 glycosyl hydrolase JEQ15_17315 PF11975 Family 4 glycosyl hydrolase C-terminal domain JEQ15_17320 PF07883 Cupin domain JEQ15_17320 PF12833 Helix-turn-helix domain JEQ15_17325 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JEQ15_17330 PF02378 Phosphotransferase system, EIIC JEQ15_17335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JEQ15_17340 PF01497 Periplasmic binding protein JEQ15_17345 PF01032 FecCD transport family JEQ15_17350 PF01032 FecCD transport family JEQ15_17355 PF00005 ABC transporter JEQ15_17365 PF07690 Major Facilitator Superfamily JEQ15_17375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JEQ15_17375 PF01568 Molydopterin dinucleotide binding domain JEQ15_17375 PF00384 Molybdopterin oxidoreductase JEQ15_17380 PF13247 4Fe-4S dicluster domain JEQ15_17380 PF12800 4Fe-4S binding domain JEQ15_17385 PF04976 DMSO reductase anchor subunit (DmsC) JEQ15_17390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JEQ15_17390 PF00356 Bacterial regulatory proteins, lacI family JEQ15_17400 PF03825 Nucleoside H+ symporter JEQ15_17405 PF02308 MgtC family JEQ15_17410 PF01757 Acyltransferase family JEQ15_17420 PF00701 Dihydrodipicolinate synthetase family JEQ15_17425 PF01380 SIS domain JEQ15_17425 PF01418 Helix-turn-helix domain, rpiR family JEQ15_17430 PF04074 YhcH/YjgK/YiaL JEQ15_17435 PF00474 Sodium:solute symporter family JEQ15_17440 PF00480 ROK family JEQ15_17445 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JEQ15_17450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JEQ15_17450 PF00384 Molybdopterin oxidoreductase JEQ15_17450 PF01568 Molydopterin dinucleotide binding domain JEQ15_17455 PF00209 Sodium:neurotransmitter symporter family JEQ15_17460 PF10397 Adenylosuccinate lyase C-terminus JEQ15_17460 PF00206 Lyase JEQ15_17465 PF00367 phosphotransferase system, EIIB JEQ15_17465 PF02378 Phosphotransferase system, EIIC JEQ15_17470 PF01418 Helix-turn-helix domain, rpiR family JEQ15_17470 PF01380 SIS domain JEQ15_17475 PF00313 'Cold-shock' DNA-binding domain JEQ15_17480 PF00849 RNA pseudouridylate synthase JEQ15_17485 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JEQ15_17490 PF01844 HNH endonuclease JEQ15_17495 PF12323 Helix-turn-helix domain JEQ15_17495 PF01385 Probable transposase JEQ15_17495 PF07282 Putative transposase DNA-binding domain JEQ15_17500 PF01797 Transposase IS200 like JEQ15_17505 PF05638 Type VI secretion system effector, Hcp JEQ15_17510 PF04717 Type VI secretion system, phage-baseplate injector JEQ15_17550 PF15976 CS1-pili formation C-terminal JEQ15_17550 PF16967 E-set like domain JEQ15_17555 PF18649 EcpB C-terminal domain JEQ15_17560 PF16449 Fimbrillin MatB JEQ15_17595 PF06755 CbtA_toxin of type IV toxin-antitoxin system JEQ15_17600 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JEQ15_17605 PF06174 Protein of unknown function (DUF987) JEQ15_17610 PF04002 RadC-like JAB domain JEQ15_17615 PF03230 Antirestriction protein JEQ15_17620 PF06067 Domain of unknown function (DUF932) JEQ15_17625 PF06006 Bacterial protein of unknown function (DUF905) JEQ15_17630 PF16168 Adhesin of bacterial autotransporter system, probable stalk JEQ15_17630 PF03797 Autotransporter beta-domain JEQ15_17630 PF13018 Extended Signal Peptide of Type V secretion system JEQ15_17690 PF13817 IS66 C-terminal element JEQ15_17690 PF13007 Transposase C of IS166 homeodomain JEQ15_17690 PF13005 zinc-finger binding domain of transposase IS66 JEQ15_17690 PF03050 Transposase IS66 family JEQ15_17695 PF05717 IS66 Orf2 like protein JEQ15_17705 PF05598 Transposase domain (DUF772) JEQ15_17705 PF01609 Transposase DDE domain JEQ15_17715 PF00302 Chloramphenicol acetyltransferase JEQ15_17730 PF13610 DDE domain JEQ15_17750 PF13610 DDE domain JEQ15_17755 PF02796 Helix-turn-helix domain of resolvase JEQ15_17755 PF00239 Resolvase, N terminal domain JEQ15_17760 PF13700 Domain of unknown function (DUF4158) JEQ15_17760 PF01526 Tn3 transposase DDE domain JEQ15_17770 PF13610 DDE domain JEQ15_17785 PF07690 Major Facilitator Superfamily JEQ15_17790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_17790 PF03466 LysR substrate binding domain JEQ15_17805 PF00809 Pterin binding enzyme JEQ15_17815 PF02332 Methane/Phenol/Toluene Hydroxylase JEQ15_17830 PF13610 DDE domain JEQ15_17840 PF01636 Phosphotransferase enzyme family JEQ15_17845 PF02522 Aminoglycoside 3-N-acetyltransferase JEQ15_17850 PF13610 DDE domain JEQ15_17855 PF01636 Phosphotransferase enzyme family JEQ15_17860 PF13610 DDE domain JEQ15_17875 PF00809 Pterin binding enzyme JEQ15_17880 PF01636 Phosphotransferase enzyme family JEQ15_17885 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase JEQ15_17900 PF02522 Aminoglycoside 3-N-acetyltransferase JEQ15_17950 PF00809 Pterin binding enzyme JEQ15_17955 PF00893 Small Multidrug Resistance protein JEQ15_17965 PF00132 Bacterial transferase hexapeptide (six repeats) JEQ15_17970 PF00905 Penicillin binding protein transpeptidase domain JEQ15_17980 PF13610 DDE domain JEQ15_17995 PF13737 Transposase DDE domain JEQ15_18015 PF13610 DDE domain JEQ15_18020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JEQ15_18040 PF13610 DDE domain JEQ15_18050 PF00809 Pterin binding enzyme JEQ15_18055 PF00893 Small Multidrug Resistance protein JEQ15_18060 PF13427 Domain of unknown function (DUF4111) JEQ15_18060 PF01909 Nucleotidyltransferase domain JEQ15_18065 PF00186 Dihydrofolate reductase JEQ15_18070 PF13495 Phage integrase, N-terminal SAM-like domain JEQ15_18070 PF00589 Phage integrase family JEQ15_18075 PF00563 EAL domain JEQ15_18075 PF11809 Domain of unknown function (DUF3330) JEQ15_18085 PF13610 DDE domain JEQ15_18095 PF00563 EAL domain JEQ15_18095 PF00990 Diguanylate cyclase, GGDEF domain JEQ15_18095 PF03707 Bacterial signalling protein N terminal repeat JEQ15_18095 PF13188 PAS domain JEQ15_18100 PF05052 MerE protein JEQ15_18105 PF13411 MerR HTH family regulatory protein JEQ15_18110 PF00403 Heavy-metal-associated domain JEQ15_18110 PF07992 Pyridine nucleotide-disulphide oxidoreductase JEQ15_18110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JEQ15_18115 PF03203 MerC mercury resistance protein JEQ15_18120 PF00403 Heavy-metal-associated domain JEQ15_18125 PF02411 MerT mercuric transport protein JEQ15_18130 PF09278 MerR, DNA binding JEQ15_18130 PF00376 MerR family regulatory protein JEQ15_18160 PF00589 Phage integrase family JEQ15_18160 PF14659 Phage integrase, N-terminal SAM-like domain JEQ15_18160 PF13356 Arm DNA-binding domain JEQ15_18170 PF01432 Peptidase family M3 JEQ15_18175 PF04445 Putative SAM-dependent methyltransferase JEQ15_18185 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JEQ15_18185 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JEQ15_18190 PF00582 Universal stress protein family JEQ15_18195 PF10625 Universal stress protein B (UspB) JEQ15_18200 PF01384 Phosphate transporter family JEQ15_18210 PF02678 Pirin JEQ15_18210 PF17954 Quercetinase C-terminal cupin domain JEQ15_18215 PF01293 Phosphoenolpyruvate carboxykinase JEQ15_18220 PF01430 Hsp33 protein JEQ15_18225 PF01479 S4 domain JEQ15_18230 PF07095 Intracellular growth attenuator protein IgaA JEQ15_18235 PF00293 NUDIX domain JEQ15_18240 PF03180 NLPA lipoprotein JEQ15_18245 PF00905 Penicillin binding protein transpeptidase domain JEQ15_18245 PF17092 Penicillin-binding protein OB-like domain JEQ15_18245 PF00912 Transglycosylase JEQ15_18265 PF00263 Bacterial type II and III secretion system protein JEQ15_18265 PF03958 Bacterial type II/III secretion system short domain JEQ15_18270 PF01202 Shikimate kinase JEQ15_18275 PF01761 3-dehydroquinate synthase JEQ15_18280 PF05036 Sporulation related domain JEQ15_18285 PF02086 D12 class N6 adenine-specific DNA methyltransferase JEQ15_18290 PF00834 Ribulose-phosphate 3 epimerase family JEQ15_18295 PF13419 Haloacid dehalogenase-like hydrolase JEQ15_18300 PF00579 tRNA synthetases class I (W and Y) JEQ15_18305 PF07282 Putative transposase DNA-binding domain JEQ15_18305 PF01385 Probable transposase JEQ15_18305 PF12323 Helix-turn-helix domain JEQ15_18310 PF01797 Transposase IS200 like JEQ15_18315 PF03475 3-alpha domain JEQ15_18315 PF03473 MOSC domain JEQ15_18320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JEQ15_18320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JEQ15_18325 PF16177 Acetyl-coenzyme A synthetase N-terminus JEQ15_18325 PF13193 AMP-binding enzyme C-terminal domain JEQ15_18325 PF00501 AMP-binding enzyme JEQ15_18330 PF04341 Protein of unknown function, DUF485 JEQ15_18335 PF00474 Sodium:solute symporter family JEQ15_18340 PF00884 Sulfatase JEQ15_18345 PF01385 Probable transposase JEQ15_18345 PF12323 Helix-turn-helix domain JEQ15_18345 PF07282 Putative transposase DNA-binding domain JEQ15_18350 PF01797 Transposase IS200 like JEQ15_18355 PF02589 LUD domain JEQ15_18360 PF02589 LUD domain JEQ15_18360 PF13183 4Fe-4S dicluster domain JEQ15_18360 PF11870 Domain of unknown function (DUF3390) JEQ15_18365 PF02754 Cysteine-rich domain JEQ15_18390 PF07729 FCD domain JEQ15_18390 PF00392 Bacterial regulatory proteins, gntR family JEQ15_18395 PF07690 Major Facilitator Superfamily JEQ15_18400 PF00294 pfkB family carbohydrate kinase JEQ15_18405 PF07728 AAA domain (dynein-related subfamily) JEQ15_18405 PF17868 AAA lid domain JEQ15_18405 PF12592 Protein of unknown function (DUF3763) JEQ15_18410 PF05762 VWA domain containing CoxE-like protein JEQ15_18415 PF03590 Aspartate-ammonia ligase JEQ15_18420 PF01037 Lrp/AsnC ligand binding domain JEQ15_18425 PF00258 Flavodoxin JEQ15_18430 PF01134 Glucose inhibited division protein A JEQ15_18430 PF13932 GidA associated domain JEQ15_18435 PF02527 rRNA small subunit methyltransferase G JEQ15_18440 PF03899 ATP synthase I chain JEQ15_18445 PF00119 ATP synthase A chain JEQ15_18450 PF00137 ATP synthase subunit C JEQ15_18455 PF00430 ATP synthase B/B' CF(0) JEQ15_18460 PF00213 ATP synthase delta (OSCP) subunit JEQ15_18465 PF02874 ATP synthase alpha/beta family, beta-barrel domain JEQ15_18465 PF00306 ATP synthase alpha/beta chain, C terminal domain JEQ15_18465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JEQ15_18470 PF00231 ATP synthase JEQ15_18475 PF02874 ATP synthase alpha/beta family, beta-barrel domain JEQ15_18475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JEQ15_18480 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JEQ15_18480 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JEQ15_18485 PF12804 MobA-like NTP transferase domain JEQ15_18485 PF00132 Bacterial transferase hexapeptide (six repeats) JEQ15_18490 PF01380 SIS domain JEQ15_18495 PF08722 TnsA endonuclease N terminal JEQ15_18495 PF08721 TnsA endonuclease C terminal JEQ15_18500 PF00665 Integrase core domain JEQ15_18505 PF11426 Tn7 transposition regulator TnsC JEQ15_18505 PF13401 AAA domain JEQ15_18510 PF15978 Tn7-like transposition protein D JEQ15_18510 PF06527 TniQ JEQ15_18515 PF18623 TnsE C-terminal domain JEQ15_18540 PF01909 Nucleotidyltransferase domain JEQ15_18540 PF13427 Domain of unknown function (DUF4111) JEQ15_18545 PF00583 Acetyltransferase (GNAT) family JEQ15_18550 PF00186 Dihydrofolate reductase JEQ15_18555 PF13495 Phage integrase, N-terminal SAM-like domain JEQ15_18555 PF00589 Phage integrase family JEQ15_18560 PF13495 Phage integrase, N-terminal SAM-like domain JEQ15_18560 PF00589 Phage integrase family JEQ15_18570 PF00005 ABC transporter JEQ15_18570 PF08402 TOBE domain JEQ15_18575 PF00528 Binding-protein-dependent transport system inner membrane component JEQ15_18585 PF01266 FAD dependent oxidoreductase JEQ15_18610 PF03606 C4-dicarboxylate anaerobic carrier JEQ15_18615 PF02909 Tetracyclin repressor-like, C-terminal domain JEQ15_18615 PF00440 Bacterial regulatory proteins, tetR family JEQ15_18620 PF13533 Biotin-lipoyl like JEQ15_18640 PF00577 Outer membrane usher protein JEQ15_18640 PF13954 PapC N-terminal domain JEQ15_18640 PF13953 PapC C-terminal domain JEQ15_18645 PF00577 Outer membrane usher protein JEQ15_18645 PF13954 PapC N-terminal domain JEQ15_18645 PF13953 PapC C-terminal domain JEQ15_18670 PF04076 Bacterial OB fold (BOF) protein JEQ15_18680 PF00480 ROK family JEQ15_18690 PF03552 Cellulose synthase JEQ15_18690 PF07238 PilZ domain JEQ15_18690 PF00535 Glycosyl transferase family 2 JEQ15_18695 PF03170 Bacterial cellulose synthase subunit JEQ15_18700 PF13181 Tetratricopeptide repeat JEQ15_18700 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JEQ15_18710 PF08448 PAS fold JEQ15_18710 PF00990 Diguanylate cyclase, GGDEF domain JEQ15_18715 PF00483 Nucleotidyl transferase JEQ15_18720 PF01270 Glycosyl hydrolases family 8 JEQ15_18725 PF00884 Sulfatase JEQ15_18730 PF09107 Elongation factor SelB, winged helix JEQ15_18730 PF00009 Elongation factor Tu GTP binding domain JEQ15_18730 PF03144 Elongation factor Tu domain 2 JEQ15_18730 PF09106 Elongation factor SelB, winged helix JEQ15_18735 PF12390 Selenocysteine synthase N terminal JEQ15_18735 PF03841 L-seryl-tRNA selenium transferase JEQ15_18740 PF04216 Protein involved in formate dehydrogenase formation JEQ15_18745 PF01292 Prokaryotic cytochrome b561 JEQ15_18750 PF09163 Formate dehydrogenase N, transmembrane JEQ15_18750 PF13247 4Fe-4S dicluster domain JEQ15_18760 PF02634 FdhD/NarQ family JEQ15_18780 PF00795 Carbon-nitrogen hydrolase JEQ15_18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JEQ15_18785 PF03466 LysR substrate binding domain JEQ15_18805 PF03544 Gram-negative bacterial TonB protein C-terminal JEQ15_18820 PF06496 Protein of unknown function (DUF1097) JEQ15_18825 PF13657 HipA N-terminal domain JEQ15_18825 PF07804 HipA-like C-terminal domain JEQ15_18840 PF13610 DDE domain JEQ15_18850 PF00580 UvrD/REP helicase N-terminal domain JEQ15_18850 PF13361 UvrD-like helicase C-terminal domain JEQ15_18880 PF06122 Conjugative relaxosome accessory transposon protein JEQ15_18935 PF02899 Phage integrase, N-terminal SAM-like domain JEQ15_18935 PF00589 Phage integrase family JEQ15_18940 PF01926 50S ribosome-binding GTPase JEQ15_18940 PF12631 MnmE helical domain JEQ15_18940 PF10396 GTP-binding protein TrmE N-terminus JEQ15_18945 PF02096 60Kd inner membrane protein JEQ15_18945 PF14849 YidC periplasmic domain JEQ15_18950 PF01809 Putative membrane protein insertion efficiency factor JEQ15_18955 PF00825 Ribonuclease P JEQ15_18960 PF00468 Ribosomal protein L34 JEQ15_18980 PF13614 AAA domain JEQ15_19010 PF13599 Pentapeptide repeats (9 copies)