locus-tag class description KFE98_00005 PF00308 Bacterial dnaA protein KFE98_00005 PF08299 Bacterial dnaA protein helix-turn-helix KFE98_00005 PF11638 DnaA N-terminal domain KFE98_00035 PF00037 4Fe-4S binding domain KFE98_00055 PF00266 Aminotransferase class-V KFE98_00060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFE98_00060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFE98_00070 PF01168 Alanine racemase, N-terminal domain KFE98_00085 PF01259 SAICAR synthetase KFE98_00090 PF02562 PhoH-like protein KFE98_00100 PF03992 Antibiotic biosynthesis monooxygenase KFE98_00135 PF06580 Histidine kinase KFE98_00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_00135 PF00672 HAMP domain KFE98_00135 PF02743 Cache domain KFE98_00140 PF00072 Response regulator receiver domain KFE98_00140 PF04397 LytTr DNA-binding domain KFE98_00160 PF04241 Protein of unknown function (DUF423) KFE98_00165 PF01293 Phosphoenolpyruvate carboxykinase KFE98_00175 PF04452 RNA methyltransferase KFE98_00185 PF02254 TrkA-N domain KFE98_00185 PF02080 TrkA-C domain KFE98_00195 PF00520 Ion transport protein KFE98_00195 PF00027 Cyclic nucleotide-binding domain KFE98_00210 PF00484 Carbonic anhydrase KFE98_00215 PF00221 Aromatic amino acid lyase KFE98_00220 PF13393 Histidyl-tRNA synthetase KFE98_00220 PF03129 Anticodon binding domain KFE98_00225 PF00005 ABC transporter KFE98_00225 PF12848 ABC transporter KFE98_00230 PF02469 Fasciclin domain KFE98_00240 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KFE98_00240 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KFE98_00260 PF01676 Metalloenzyme superfamily KFE98_00300 PF10531 SLBB domain KFE98_00300 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KFE98_00300 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KFE98_00315 PF03458 UPF0126 domain KFE98_00335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFE98_00335 PF00289 Biotin carboxylase, N-terminal domain KFE98_00335 PF02785 Biotin carboxylase C-terminal domain KFE98_00345 PF02397 Bacterial sugar transferase KFE98_00350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KFE98_00360 PF01501 Glycosyl transferase family 8 KFE98_00360 PF00535 Glycosyl transferase family 2 KFE98_00375 PF00977 Histidine biosynthesis protein KFE98_00380 PF00117 Glutamine amidotransferase class-I KFE98_00405 PF01171 PP-loop family KFE98_00430 PF00211 Adenylate and Guanylate cyclase catalytic domain KFE98_00435 PF00107 Zinc-binding dehydrogenase KFE98_00435 PF08240 Alcohol dehydrogenase GroES-like domain KFE98_00475 PF00144 Beta-lactamase KFE98_00480 PF00144 Beta-lactamase KFE98_00480 PF11954 Domain of unknown function (DUF3471) KFE98_00510 PF02581 Thiamine monophosphate synthase KFE98_00510 PF08543 Phosphomethylpyrimidine kinase KFE98_00515 PF03070 TENA/THI-4/PQQC family KFE98_00520 PF02581 Thiamine monophosphate synthase KFE98_00525 PF02110 Hydroxyethylthiazole kinase family KFE98_00540 PF01757 Acyltransferase family KFE98_00550 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KFE98_00550 PF00326 Prolyl oligopeptidase family KFE98_00555 PF00854 POT family KFE98_00570 PF01464 Transglycosylase SLT domain KFE98_00570 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFE98_00575 PF01565 FAD binding domain KFE98_00575 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KFE98_00590 PF01914 MarC family integral membrane protein KFE98_00600 PF00082 Subtilase family KFE98_00605 PF00082 Subtilase family KFE98_00615 PF13860 FlgD Ig-like domain KFE98_00615 PF05922 Peptidase inhibitor I9 KFE98_00615 PF02225 PA domain KFE98_00615 PF00082 Subtilase family KFE98_00625 PF00881 Nitroreductase family KFE98_00640 PF17863 AAA lid domain KFE98_00640 PF07726 ATPase family associated with various cellular activities (AAA) KFE98_00645 PF00639 PPIC-type PPIASE domain KFE98_00645 PF09312 SurA N-terminal domain KFE98_00660 PF05698 Bacterial trigger factor protein (TF) C-terminus KFE98_00665 PF00571 CBS domain KFE98_00665 PF00478 IMP dehydrogenase / GMP reductase domain KFE98_00680 PF00535 Glycosyl transferase family 2 KFE98_00695 PF13537 Glutamine amidotransferase domain KFE98_00695 PF00733 Asparagine synthase KFE98_00705 PF03600 Citrate transporter KFE98_00705 PF02080 TrkA-C domain KFE98_00715 PF01507 Phosphoadenosine phosphosulfate reductase family KFE98_00720 PF00009 Elongation factor Tu GTP binding domain KFE98_00740 PF00534 Glycosyl transferases group 1 KFE98_00740 PF13439 Glycosyltransferase Family 4 KFE98_00745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KFE98_00755 PF02142 MGS-like domain KFE98_00755 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KFE98_00755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFE98_00765 PF00535 Glycosyl transferase family 2 KFE98_00770 PF08889 WbqC-like protein family KFE98_00790 PF02350 UDP-N-acetylglucosamine 2-epimerase KFE98_00795 PF01467 Cytidylyltransferase-like KFE98_00805 PF16363 GDP-mannose 4,6 dehydratase KFE98_00810 PF13580 SIS domain KFE98_00820 PF08241 Methyltransferase domain KFE98_00835 PF00664 ABC transporter transmembrane region KFE98_00835 PF00005 ABC transporter KFE98_00840 PF13614 AAA domain KFE98_00840 PF13807 G-rich domain on putative tyrosine kinase KFE98_00840 PF02706 Chain length determinant protein KFE98_00885 PF02754 Cysteine-rich domain KFE98_00885 PF13183 4Fe-4S dicluster domain KFE98_00895 PF13183 4Fe-4S dicluster domain KFE98_00895 PF02754 Cysteine-rich domain KFE98_00905 PF01520 N-acetylmuramoyl-L-alanine amidase KFE98_00910 PF04453 LPS transport system D KFE98_00915 PF01042 Endoribonuclease L-PSP KFE98_00925 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFE98_00925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KFE98_00930 PF13537 Glutamine amidotransferase domain KFE98_00930 PF00733 Asparagine synthase KFE98_00945 PF13807 G-rich domain on putative tyrosine kinase KFE98_00945 PF02706 Chain length determinant protein KFE98_00945 PF13614 AAA domain KFE98_00950 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KFE98_00955 PF00953 Glycosyl transferase family 4 KFE98_00965 PF17755 UvrA DNA-binding domain KFE98_00965 PF17760 UvrA interaction domain KFE98_00965 PF00005 ABC transporter KFE98_00995 PF02810 SEC-C motif KFE98_00995 PF07517 SecA DEAD-like domain KFE98_00995 PF01043 SecA preprotein cross-linking domain KFE98_00995 PF07516 SecA Wing and Scaffold domain KFE98_01005 PF00266 Aminotransferase class-V KFE98_01050 PF07676 WD40-like Beta Propeller Repeat KFE98_01050 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KFE98_01050 PF00326 Prolyl oligopeptidase family KFE98_01060 PF01381 Helix-turn-helix KFE98_01080 PF03797 Autotransporter beta-domain KFE98_01080 PF12951 Passenger-associated-transport-repeat KFE98_01080 PF00082 Subtilase family KFE98_01115 PF00255 Glutathione peroxidase KFE98_01120 PF01047 MarR family KFE98_01150 PF00196 Bacterial regulatory proteins, luxR family KFE98_01150 PF00072 Response regulator receiver domain KFE98_01205 PF00027 Cyclic nucleotide-binding domain KFE98_01205 PF13545 Crp-like helix-turn-helix domain KFE98_01230 PF01209 ubiE/COQ5 methyltransferase family KFE98_01240 PF06580 Histidine kinase KFE98_01240 PF07694 5TMR of 5TMR-LYT KFE98_01240 PF13492 GAF domain KFE98_01240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_01245 PF04397 LytTr DNA-binding domain KFE98_01245 PF00072 Response regulator receiver domain KFE98_01280 PF02311 AraC-like ligand binding domain KFE98_01280 PF12833 Helix-turn-helix domain KFE98_01305 PF13411 MerR HTH family regulatory protein KFE98_01315 PF01638 HxlR-like helix-turn-helix KFE98_01325 PF06580 Histidine kinase KFE98_01325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_01325 PF00672 HAMP domain KFE98_01325 PF02743 Cache domain KFE98_01330 PF04397 LytTr DNA-binding domain KFE98_01330 PF00072 Response regulator receiver domain KFE98_01340 PF00171 Aldehyde dehydrogenase family KFE98_01345 PF00106 short chain dehydrogenase KFE98_01355 PF12833 Helix-turn-helix domain KFE98_01355 PF00072 Response regulator receiver domain KFE98_01365 PF02311 AraC-like ligand binding domain KFE98_01365 PF12833 Helix-turn-helix domain KFE98_01375 PF01638 HxlR-like helix-turn-helix KFE98_01390 PF01810 LysE type translocator KFE98_01395 PF00196 Bacterial regulatory proteins, luxR family KFE98_01395 PF00072 Response regulator receiver domain KFE98_01410 PF02666 Phosphatidylserine decarboxylase KFE98_01415 PF04055 Radical SAM superfamily KFE98_01415 PF01938 TRAM domain KFE98_01415 PF00919 Uncharacterized protein family UPF0004 KFE98_01455 PF00196 Bacterial regulatory proteins, luxR family KFE98_01455 PF00072 Response regulator receiver domain KFE98_01465 PF12833 Helix-turn-helix domain KFE98_01465 PF02311 AraC-like ligand binding domain KFE98_01545 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) KFE98_01550 PF00561 alpha/beta hydrolase fold KFE98_01705 PF00041 Fibronectin type III domain KFE98_01705 PF00704 Glycosyl hydrolases family 18 KFE98_01765 PF00772 DnaB-like helicase N terminal domain KFE98_01765 PF03796 DnaB-like helicase C terminal domain KFE98_01780 PF08032 RNA 2'-O ribose methyltransferase substrate binding KFE98_01780 PF00588 SpoU rRNA Methylase family KFE98_01785 PF00731 AIR carboxylase KFE98_01800 PF00485 Phosphoribulokinase / Uridine kinase family KFE98_01805 PF00923 Transaldolase/Fructose-6-phosphate aldolase KFE98_01810 PF02580 D-Tyr-tRNA(Tyr) deacylase KFE98_01830 PF00958 GMP synthase C terminal domain KFE98_01830 PF00117 Glutamine amidotransferase class-I KFE98_01830 PF03352 Methyladenine glycosylase KFE98_01830 PF13302 Acetyltransferase (GNAT) domain KFE98_01830 PF13673 Acetyltransferase (GNAT) domain KFE98_01840 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KFE98_01840 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KFE98_01845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFE98_01845 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFE98_01850 PF06574 FAD synthetase KFE98_01850 PF01687 Riboflavin kinase KFE98_01910 PF00834 Ribulose-phosphate 3 epimerase family KFE98_01915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KFE98_01915 PF00013 KH domain KFE98_01915 PF01138 3' exoribonuclease family, domain 1 KFE98_01915 PF03725 3' exoribonuclease family, domain 2 KFE98_01915 PF00575 S1 RNA binding domain KFE98_01920 PF00312 Ribosomal protein S15 KFE98_01925 PF17848 Acetyl-coA carboxylase zinc finger domain KFE98_01925 PF01039 Carboxyl transferase domain KFE98_01930 PF01791 DeoC/LacD family aldolase KFE98_01940 PF01268 Formate--tetrahydrofolate ligase KFE98_01960 PF00005 ABC transporter KFE98_01960 PF00664 ABC transporter transmembrane region KFE98_01960 PF03412 Peptidase C39 family KFE98_01970 PF01062 Bestrophin, RFP-TM, chloride channel KFE98_01985 PF00923 Transaldolase/Fructose-6-phosphate aldolase KFE98_01990 PF00793 DAHP synthetase I family KFE98_01995 PF02348 Cytidylyltransferase KFE98_02000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KFE98_02005 PF00465 Iron-containing alcohol dehydrogenase KFE98_02015 PF13090 Polyphosphate kinase C-terminal domain 2 KFE98_02015 PF17941 Polyphosphate kinase C-terminal domain 1 KFE98_02015 PF02503 Polyphosphate kinase middle domain KFE98_02015 PF13089 Polyphosphate kinase N-terminal domain KFE98_02020 PF02541 Ppx/GppA phosphatase family KFE98_02040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KFE98_02040 PF03129 Anticodon binding domain KFE98_02040 PF09180 Prolyl-tRNA synthetase, C-terminal KFE98_02065 PF00873 AcrB/AcrD/AcrF family KFE98_02080 PF00072 Response regulator receiver domain KFE98_02080 PF04397 LytTr DNA-binding domain KFE98_02085 PF07694 5TMR of 5TMR-LYT KFE98_02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_02085 PF06580 Histidine kinase KFE98_02090 PF00144 Beta-lactamase KFE98_02095 PF00144 Beta-lactamase KFE98_02110 PF01209 ubiE/COQ5 methyltransferase family KFE98_02160 PF00672 HAMP domain KFE98_02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_02160 PF18698 Histidine kinase sensor domain KFE98_02160 PF00512 His Kinase A (phospho-acceptor) domain KFE98_02165 PF00072 Response regulator receiver domain KFE98_02165 PF00486 Transcriptional regulatory protein, C terminal KFE98_02170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_02170 PF01751 Toprim domain KFE98_02170 PF00204 DNA gyrase B KFE98_02170 PF00986 DNA gyrase B subunit, carboxyl terminus KFE98_02185 PF00005 ABC transporter KFE98_02200 PF01370 NAD dependent epimerase/dehydratase family KFE98_02200 PF02911 Formyl transferase, C-terminal domain KFE98_02200 PF00551 Formyl transferase KFE98_02210 PF16363 GDP-mannose 4,6 dehydratase KFE98_02215 PF01370 NAD dependent epimerase/dehydratase family KFE98_02220 PF02590 Predicted SPOUT methyltransferase KFE98_02225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KFE98_02225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KFE98_02230 PF03631 Virulence factor BrkB KFE98_02245 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFE98_02245 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KFE98_02245 PF02142 MGS-like domain KFE98_02260 PF11700 Vacuole effluxer Atg22 like KFE98_02275 PF01208 Uroporphyrinogen decarboxylase (URO-D) KFE98_02290 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KFE98_02295 PF00288 GHMP kinases N terminal domain KFE98_02295 PF08544 GHMP kinases C terminal KFE98_02305 PF01702 Queuine tRNA-ribosyltransferase KFE98_02310 PF00535 Glycosyl transferase family 2 KFE98_02315 PF08281 Sigma-70, region 4 KFE98_02315 PF04542 Sigma-70 region 2 KFE98_02320 PF02527 rRNA small subunit methyltransferase G KFE98_02335 PF00005 ABC transporter KFE98_02335 PF00664 ABC transporter transmembrane region KFE98_02350 PF00468 Ribosomal protein L34 KFE98_02355 PF01266 FAD dependent oxidoreductase KFE98_02365 PF04029 2-phosphosulpholactate phosphatase KFE98_02375 PF02719 Polysaccharide biosynthesis protein KFE98_02385 PF03009 Glycerophosphoryl diester phosphodiesterase family KFE98_02425 PF13439 Glycosyltransferase Family 4 KFE98_02425 PF00534 Glycosyl transferases group 1 KFE98_02435 PF00733 Asparagine synthase KFE98_02435 PF13537 Glutamine amidotransferase domain KFE98_02445 PF02585 GlcNAc-PI de-N-acetylase KFE98_02455 PF01578 Cytochrome C assembly protein KFE98_02470 PF01578 Cytochrome C assembly protein KFE98_02470 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KFE98_02490 PF02545 Maf-like protein KFE98_02495 PF00512 His Kinase A (phospho-acceptor) domain KFE98_02495 PF09308 LuxQ, periplasmic KFE98_02495 PF00072 Response regulator receiver domain KFE98_02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_02510 PF01569 PAP2 superfamily KFE98_02515 PF01018 GTP1/OBG KFE98_02515 PF01926 50S ribosome-binding GTPase KFE98_02525 PF00156 Phosphoribosyl transferase domain KFE98_02530 PF00072 Response regulator receiver domain KFE98_02530 PF01584 CheW-like domain KFE98_02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_02530 PF02895 Signal transducing histidine kinase, homodimeric domain KFE98_02530 PF01627 Hpt domain KFE98_02535 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KFE98_02535 PF00326 Prolyl oligopeptidase family KFE98_02615 PF07690 Major Facilitator Superfamily KFE98_02640 PF00893 Small Multidrug Resistance protein KFE98_02670 PF00873 AcrB/AcrD/AcrF family KFE98_02680 PF13533 Biotin-lipoyl like KFE98_02705 PF16925 Tetracyclin repressor-like, C-terminal domain KFE98_02705 PF00440 Bacterial regulatory proteins, tetR family KFE98_02720 PF07237 Protein of unknown function (DUF1428) KFE98_02735 PF01638 HxlR-like helix-turn-helix KFE98_02775 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFE98_02785 PF08281 Sigma-70, region 4 KFE98_02785 PF04542 Sigma-70 region 2 KFE98_02805 PF05140 ResB-like family KFE98_02805 PF01578 Cytochrome C assembly protein KFE98_02810 PF02335 Cytochrome c552 KFE98_02815 PF03264 NapC/NirT cytochrome c family, N-terminal region KFE98_02825 PF00581 Rhodanese-like domain KFE98_02845 PF01432 Peptidase family M3 KFE98_02865 PF00873 AcrB/AcrD/AcrF family KFE98_02875 PF04397 LytTr DNA-binding domain KFE98_02875 PF00072 Response regulator receiver domain KFE98_02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_02880 PF02743 Cache domain KFE98_02880 PF00672 HAMP domain KFE98_02880 PF06580 Histidine kinase KFE98_02910 PF01641 SelR domain KFE98_02920 PF06965 Na+/H+ antiporter 1 KFE98_02930 PF00072 Response regulator receiver domain KFE98_02930 PF00486 Transcriptional regulatory protein, C terminal KFE98_03010 PF00196 Bacterial regulatory proteins, luxR family KFE98_03010 PF00072 Response regulator receiver domain KFE98_03015 PF06580 Histidine kinase KFE98_03015 PF07694 5TMR of 5TMR-LYT KFE98_03025 PF06580 Histidine kinase KFE98_03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_03025 PF07694 5TMR of 5TMR-LYT KFE98_03030 PF04397 LytTr DNA-binding domain KFE98_03030 PF00072 Response regulator receiver domain KFE98_03045 PF00149 Calcineurin-like phosphoesterase KFE98_03065 PF00072 Response regulator receiver domain KFE98_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_03065 PF00512 His Kinase A (phospho-acceptor) domain KFE98_03065 PF12833 Helix-turn-helix domain KFE98_03065 PF07494 Two component regulator propeller KFE98_03065 PF00072 Response regulator receiver domain KFE98_03065 PF07495 Y_Y_Y domain KFE98_03065 PF07495 Y_Y_Y domain KFE98_03065 PF00512 His Kinase A (phospho-acceptor) domain KFE98_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_03065 PF12833 Helix-turn-helix domain KFE98_03065 PF07494 Two component regulator propeller KFE98_03080 PF00072 Response regulator receiver domain KFE98_03120 PF00593 TonB dependent receptor KFE98_03120 PF07715 TonB-dependent Receptor Plug Domain KFE98_03135 PF02417 Chromate transporter KFE98_03140 PF10518 TAT (twin-arginine translocation) pathway signal sequence KFE98_03140 PF07732 Multicopper oxidase KFE98_03140 PF07731 Multicopper oxidase KFE98_03140 PF00394 Multicopper oxidase KFE98_03150 PF00034 Cytochrome c KFE98_03150 PF03150 Di-haem cytochrome c peroxidase KFE98_03155 PF03150 Di-haem cytochrome c peroxidase KFE98_03155 PF00034 Cytochrome c KFE98_03220 PF00072 Response regulator receiver domain KFE98_03220 PF00196 Bacterial regulatory proteins, luxR family KFE98_03225 PF07730 Histidine kinase KFE98_03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_03250 PF06580 Histidine kinase KFE98_03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_03250 PF07694 5TMR of 5TMR-LYT KFE98_03255 PF00072 Response regulator receiver domain KFE98_03255 PF04397 LytTr DNA-binding domain KFE98_03290 PF13545 Crp-like helix-turn-helix domain KFE98_03290 PF00027 Cyclic nucleotide-binding domain KFE98_03325 PF01370 NAD dependent epimerase/dehydratase family KFE98_03345 PF00578 AhpC/TSA family KFE98_03345 PF10417 C-terminal domain of 1-Cys peroxiredoxin KFE98_03355 PF04379 ApaG domain KFE98_03360 PF00171 Aldehyde dehydrogenase family KFE98_03390 PF01642 Methylmalonyl-CoA mutase KFE98_03395 PF01642 Methylmalonyl-CoA mutase KFE98_03395 PF02310 B12 binding domain KFE98_03405 PF03741 Integral membrane protein TerC family KFE98_03420 PF03883 Peroxide stress protein YaaA KFE98_03430 PF00293 NUDIX domain KFE98_03450 PF03062 MBOAT, membrane-bound O-acyltransferase family KFE98_03520 PF02780 Transketolase, C-terminal domain KFE98_03520 PF02779 Transketolase, pyrimidine binding domain KFE98_03530 PF00781 Diacylglycerol kinase catalytic domain KFE98_03545 PF00534 Glycosyl transferases group 1 KFE98_03545 PF13439 Glycosyltransferase Family 4 KFE98_03550 PF01915 Glycosyl hydrolase family 3 C-terminal domain KFE98_03550 PF00933 Glycosyl hydrolase family 3 N terminal domain KFE98_03570 PF00072 Response regulator receiver domain KFE98_03570 PF04397 LytTr DNA-binding domain KFE98_03575 PF06580 Histidine kinase KFE98_03575 PF07694 5TMR of 5TMR-LYT KFE98_03585 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFE98_03610 PF00155 Aminotransferase class I and II KFE98_03615 PF01467 Cytidylyltransferase-like KFE98_03615 PF00294 pfkB family carbohydrate kinase KFE98_03620 PF01209 ubiE/COQ5 methyltransferase family KFE98_03630 PF01047 MarR family KFE98_03635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KFE98_03635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KFE98_03635 PF00378 Enoyl-CoA hydratase/isomerase KFE98_03640 PF02803 Thiolase, C-terminal domain KFE98_03640 PF00108 Thiolase, N-terminal domain KFE98_03645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFE98_03645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFE98_03645 PF02770 Acyl-CoA dehydrogenase, middle domain KFE98_03650 PF00271 Helicase conserved C-terminal domain KFE98_03650 PF00270 DEAD/DEAH box helicase KFE98_03670 PF00285 Citrate synthase, C-terminal domain KFE98_03675 PF00113 Enolase, C-terminal TIM barrel domain KFE98_03675 PF03952 Enolase, N-terminal domain KFE98_03680 PF00117 Glutamine amidotransferase class-I KFE98_03680 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KFE98_03685 PF01196 Ribosomal protein L17 KFE98_03690 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KFE98_03690 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KFE98_03690 PF01000 RNA polymerase Rpb3/RpoA insert domain KFE98_03695 PF01479 S4 domain KFE98_03695 PF00163 Ribosomal protein S4/S9 N-terminal domain KFE98_03700 PF00411 Ribosomal protein S11 KFE98_03705 PF00416 Ribosomal protein S13/S18 KFE98_03710 PF00444 Ribosomal protein L36 KFE98_03715 PF01176 Translation initiation factor 1A / IF-1 KFE98_03720 PF00557 Metallopeptidase family M24 KFE98_03725 PF00344 SecY translocase KFE98_03730 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KFE98_03735 PF00327 Ribosomal protein L30p/L7e KFE98_03740 PF00333 Ribosomal protein S5, N-terminal domain KFE98_03740 PF03719 Ribosomal protein S5, C-terminal domain KFE98_03745 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KFE98_03750 PF00347 Ribosomal protein L6 KFE98_03755 PF00410 Ribosomal protein S8 KFE98_03760 PF00253 Ribosomal protein S14p/S29e KFE98_03765 PF00673 ribosomal L5P family C-terminus KFE98_03765 PF00281 Ribosomal protein L5 KFE98_03770 PF00467 KOW motif KFE98_03770 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KFE98_03775 PF00238 Ribosomal protein L14p/L23e KFE98_03780 PF00366 Ribosomal protein S17 KFE98_03785 PF00831 Ribosomal L29 protein KFE98_03790 PF00252 Ribosomal protein L16p/L10e KFE98_03795 PF00189 Ribosomal protein S3, C-terminal domain KFE98_03795 PF07650 KH domain KFE98_03800 PF00237 Ribosomal protein L22p/L17e KFE98_03805 PF00203 Ribosomal protein S19 KFE98_03810 PF00181 Ribosomal Proteins L2, RNA binding domain KFE98_03810 PF03947 Ribosomal Proteins L2, C-terminal domain KFE98_03815 PF00276 Ribosomal protein L23 KFE98_03820 PF00573 Ribosomal protein L4/L1 family KFE98_03825 PF00297 Ribosomal protein L3 KFE98_03830 PF00338 Ribosomal protein S10p/S20e KFE98_03835 PF03764 Elongation factor G, domain IV KFE98_03835 PF14492 Elongation Factor G, domain II KFE98_03835 PF03144 Elongation factor Tu domain 2 KFE98_03835 PF00009 Elongation factor Tu GTP binding domain KFE98_03835 PF00679 Elongation factor G C-terminus KFE98_03840 PF00177 Ribosomal protein S7p/S5e KFE98_03845 PF00164 Ribosomal protein S12/S23 KFE98_03850 PF00580 UvrD/REP helicase N-terminal domain KFE98_03850 PF13361 UvrD-like helicase C-terminal domain KFE98_03860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KFE98_03865 PF00578 AhpC/TSA family KFE98_03870 PF01025 GrpE KFE98_03875 PF01556 DnaJ C terminal domain KFE98_03875 PF00226 DnaJ domain KFE98_03875 PF00684 DnaJ central domain KFE98_03880 PF13732 Domain of unknown function (DUF4162) KFE98_03880 PF00005 ABC transporter KFE98_03890 PF02954 Bacterial regulatory protein, Fis family KFE98_03890 PF00072 Response regulator receiver domain KFE98_03890 PF00158 Sigma-54 interaction domain KFE98_03915 PF02272 DHHA1 domain KFE98_03915 PF01411 tRNA synthetases class II (A) KFE98_03915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KFE98_03920 PF04225 Opacity-associated protein A LysM-like domain KFE98_03920 PF01551 Peptidase family M23 KFE98_03930 PF01370 NAD dependent epimerase/dehydratase family KFE98_03940 PF00698 Acyl transferase domain KFE98_03970 PF01078 Magnesium chelatase, subunit ChlI KFE98_03970 PF13335 Magnesium chelatase, subunit ChlI C-terminal KFE98_03985 PF01761 3-dehydroquinate synthase KFE98_03995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KFE98_03995 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KFE98_04000 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KFE98_04005 PF02954 Bacterial regulatory protein, Fis family KFE98_04005 PF00072 Response regulator receiver domain KFE98_04005 PF00158 Sigma-54 interaction domain KFE98_04010 PF01966 HD domain KFE98_04015 PF00132 Bacterial transferase hexapeptide (six repeats) KFE98_04015 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KFE98_04020 PF07977 FabA-like domain KFE98_04020 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KFE98_04025 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KFE98_04025 PF00132 Bacterial transferase hexapeptide (six repeats) KFE98_04030 PF00005 ABC transporter KFE98_04035 PF08207 Elongation factor P (EF-P) KOW-like domain KFE98_04035 PF09285 Elongation factor P, C-terminal KFE98_04035 PF01132 Elongation factor P (EF-P) OB domain KFE98_04040 PF00132 Bacterial transferase hexapeptide (six repeats) KFE98_04040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KFE98_04065 PF01063 Amino-transferase class IV KFE98_04080 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KFE98_04080 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KFE98_04080 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KFE98_04085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFE98_04100 PF00326 Prolyl oligopeptidase family KFE98_04100 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KFE98_04105 PF00490 Delta-aminolevulinic acid dehydratase KFE98_04110 PF03641 Possible lysine decarboxylase KFE98_04115 PF01790 Prolipoprotein diacylglyceryl transferase KFE98_04155 PF08241 Methyltransferase domain KFE98_04160 PF05050 Methyltransferase FkbM domain KFE98_04195 PF02585 GlcNAc-PI de-N-acetylase KFE98_04200 PF00474 Sodium:solute symporter family KFE98_04220 PF00005 ABC transporter KFE98_04220 PF16326 ABC transporter C-terminal domain KFE98_04220 PF12848 ABC transporter KFE98_04230 PF00326 Prolyl oligopeptidase family KFE98_04235 PF03193 RsgA GTPase KFE98_04235 PF16745 RsgA N-terminal domain KFE98_04240 PF00005 ABC transporter KFE98_04250 PF02772 S-adenosylmethionine synthetase, central domain KFE98_04250 PF00438 S-adenosylmethionine synthetase, N-terminal domain KFE98_04250 PF02773 S-adenosylmethionine synthetase, C-terminal domain KFE98_04255 PF00034 Cytochrome c KFE98_04255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KFE98_04260 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KFE98_04260 PF18764 Nitrous oxide reductase propeller repeat KFE98_04260 PF18793 Nitrous oxide reductase propeller repeat 2 KFE98_04280 PF00005 ABC transporter KFE98_04290 PF02082 Transcriptional regulator KFE98_04300 PF07715 TonB-dependent Receptor Plug Domain KFE98_04300 PF00593 TonB dependent receptor KFE98_04305 PF00106 short chain dehydrogenase KFE98_04310 PF01451 Low molecular weight phosphotyrosine protein phosphatase KFE98_04315 PF00230 Major intrinsic protein KFE98_04335 PF00196 Bacterial regulatory proteins, luxR family KFE98_04335 PF00072 Response regulator receiver domain KFE98_04340 PF17810 Arginine decarboxylase helical bundle domain KFE98_04340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KFE98_04350 PF00005 ABC transporter KFE98_04350 PF02687 FtsX-like permease family KFE98_04350 PF12704 MacB-like periplasmic core domain KFE98_04355 PF12704 MacB-like periplasmic core domain KFE98_04355 PF02687 FtsX-like permease family KFE98_04355 PF00005 ABC transporter KFE98_04360 PF02687 FtsX-like permease family KFE98_04360 PF12704 MacB-like periplasmic core domain KFE98_04375 PF17932 Tetracyclin repressor-like, C-terminal domain KFE98_04375 PF00440 Bacterial regulatory proteins, tetR family KFE98_04380 PF01112 Asparaginase KFE98_04385 PF13649 Methyltransferase domain KFE98_04390 PF00535 Glycosyl transferase family 2 KFE98_04445 PF02397 Bacterial sugar transferase KFE98_04470 PF04055 Radical SAM superfamily KFE98_04470 PF13186 Iron-sulfur cluster-binding domain KFE98_04485 PF04055 Radical SAM superfamily KFE98_04485 PF02310 B12 binding domain KFE98_04505 PF02310 B12 binding domain KFE98_04505 PF13282 Domain of unknown function (DUF4070) KFE98_04505 PF04055 Radical SAM superfamily KFE98_04515 PF04055 Radical SAM superfamily KFE98_04515 PF01938 TRAM domain KFE98_04515 PF00919 Uncharacterized protein family UPF0004 KFE98_04525 PF07670 Nucleoside recognition KFE98_04535 PF01300 Telomere recombination KFE98_04540 PF02562 PhoH-like protein KFE98_04540 PF13638 PIN domain KFE98_04545 PF00989 PAS fold KFE98_04545 PF00512 His Kinase A (phospho-acceptor) domain KFE98_04545 PF18698 Histidine kinase sensor domain KFE98_04545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_04545 PF00672 HAMP domain KFE98_04555 PF03190 Protein of unknown function, DUF255 KFE98_04605 PF00814 Glycoprotease family KFE98_04620 PF02310 B12 binding domain KFE98_04620 PF02607 B12 binding domain KFE98_04620 PF02965 Vitamin B12 dependent methionine synthase, activation domain KFE98_04620 PF00809 Pterin binding enzyme KFE98_04620 PF02574 Homocysteine S-methyltransferase KFE98_04625 PF00809 Pterin binding enzyme KFE98_04625 PF02574 Homocysteine S-methyltransferase KFE98_04645 PF04238 Protein of unknown function (DUF420) KFE98_04660 PF00510 Cytochrome c oxidase subunit III KFE98_04665 PF00510 Cytochrome c oxidase subunit III KFE98_04670 PF01040 UbiA prenyltransferase family KFE98_04675 PF01040 UbiA prenyltransferase family KFE98_04685 PF00953 Glycosyl transferase family 4 KFE98_04695 PF01370 NAD dependent epimerase/dehydratase family KFE98_04700 PF16363 GDP-mannose 4,6 dehydratase KFE98_04705 PF00459 Inositol monophosphatase family KFE98_04710 PF00171 Aldehyde dehydrogenase family KFE98_04720 PF01791 DeoC/LacD family aldolase KFE98_04730 PF01597 Glycine cleavage H-protein KFE98_04745 PF07499 RuvA, C-terminal domain KFE98_04745 PF01330 RuvA N terminal domain KFE98_04750 PF01515 Phosphate acetyl/butaryl transferase KFE98_04750 PF03949 Malic enzyme, NAD binding domain KFE98_04750 PF00390 Malic enzyme, N-terminal domain KFE98_04755 PF02146 Sir2 family KFE98_04760 PF08534 Redoxin KFE98_04780 PF08331 Domain of unknown function (DUF1730) KFE98_04785 PF17864 RuvB AAA lid domain KFE98_04785 PF05491 RuvB C-terminal winged helix domain KFE98_04785 PF05496 Holliday junction DNA helicase RuvB P-loop domain KFE98_04790 PF00115 Cytochrome C and Quinol oxidase polypeptide I KFE98_04795 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KFE98_04820 PF00037 4Fe-4S binding domain KFE98_04820 PF13247 4Fe-4S dicluster domain KFE98_04840 PF04760 Translation initiation factor IF-2, N-terminal region KFE98_04840 PF00009 Elongation factor Tu GTP binding domain KFE98_04840 PF11987 Translation-initiation factor 2 KFE98_04845 PF13184 NusA-like KH domain KFE98_04845 PF08529 NusA N-terminal domain KFE98_04845 PF00575 S1 RNA binding domain KFE98_04850 PF02576 RimP N-terminal domain KFE98_04850 PF17384 RimP C-terminal SH3 domain KFE98_04880 PF02627 Carboxymuconolactone decarboxylase family KFE98_04915 PF00106 short chain dehydrogenase KFE98_04955 PF09334 tRNA synthetases class I (M) KFE98_04955 PF01588 Putative tRNA binding domain KFE98_04955 PF08264 Anticodon-binding domain of tRNA KFE98_04960 PF02016 LD-carboxypeptidase N-terminal domain KFE98_04960 PF17676 LD-carboxypeptidase C-terminal domain KFE98_04980 PF04551 GcpE protein KFE98_04985 PF13460 NAD(P)H-binding KFE98_04990 PF00912 Transglycosylase KFE98_04990 PF06832 Penicillin-Binding Protein C-terminus Family KFE98_04990 PF00905 Penicillin binding protein transpeptidase domain KFE98_05025 PF00849 RNA pseudouridylate synthase KFE98_05025 PF01479 S4 domain KFE98_05030 PF02021 Uncharacterised protein family UPF0102 KFE98_05060 PF01351 Ribonuclease HII KFE98_05065 PF07517 SecA DEAD-like domain KFE98_05065 PF01043 SecA preprotein cross-linking domain KFE98_05065 PF07516 SecA Wing and Scaffold domain KFE98_05080 PF01923 Cobalamin adenosyltransferase KFE98_05090 PF02347 Glycine cleavage system P-protein KFE98_05105 PF02559 CarD-like/TRCF domain KFE98_05105 PF00270 DEAD/DEAH box helicase KFE98_05105 PF00271 Helicase conserved C-terminal domain KFE98_05105 PF03461 TRCF domain KFE98_05105 PF17757 UvrB interaction domain KFE98_05110 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KFE98_05125 PF07504 Fungalysin/Thermolysin Propeptide Motif KFE98_05125 PF02868 Thermolysin metallopeptidase, alpha-helical domain KFE98_05125 PF01447 Thermolysin metallopeptidase, catalytic domain KFE98_05125 PF03413 Peptidase propeptide and YPEB domain KFE98_05130 PF00483 Nucleotidyl transferase KFE98_05135 PF00348 Polyprenyl synthetase KFE98_05140 PF00348 Polyprenyl synthetase KFE98_05150 PF08338 Domain of unknown function (DUF1731) KFE98_05150 PF01370 NAD dependent epimerase/dehydratase family KFE98_05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_05165 PF00672 HAMP domain KFE98_05165 PF02743 Cache domain KFE98_05165 PF06580 Histidine kinase KFE98_05170 PF04397 LytTr DNA-binding domain KFE98_05170 PF00072 Response regulator receiver domain KFE98_05175 PF04397 LytTr DNA-binding domain KFE98_05175 PF00072 Response regulator receiver domain KFE98_05180 PF14437 MafB19-like deaminase KFE98_05200 PF01765 Ribosome recycling factor KFE98_05205 PF00696 Amino acid kinase family KFE98_05210 PF00889 Elongation factor TS KFE98_05215 PF00318 Ribosomal protein S2 KFE98_05220 PF00380 Ribosomal protein S9/S16 KFE98_05225 PF00572 Ribosomal protein L13 KFE98_05245 PF00994 Probable molybdopterin binding domain KFE98_05245 PF03454 MoeA C-terminal region (domain IV) KFE98_05245 PF03453 MoeA N-terminal region (domain I and II) KFE98_05250 PF12804 MobA-like NTP transferase domain KFE98_05300 PF01139 tRNA-splicing ligase RtcB KFE98_05310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_05310 PF00512 His Kinase A (phospho-acceptor) domain KFE98_05310 PF08448 PAS fold KFE98_05310 PF13426 PAS domain KFE98_05310 PF00072 Response regulator receiver domain KFE98_05340 PF01131 DNA topoisomerase KFE98_05340 PF01751 Toprim domain KFE98_05385 PF00072 Response regulator receiver domain KFE98_05385 PF08279 HTH domain KFE98_05405 PF03062 MBOAT, membrane-bound O-acyltransferase family KFE98_05425 PF00440 Bacterial regulatory proteins, tetR family KFE98_05435 PF12823 Domain of unknown function (DUF3817) KFE98_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_05470 PF06580 Histidine kinase KFE98_05475 PF04397 LytTr DNA-binding domain KFE98_05475 PF00072 Response regulator receiver domain KFE98_05490 PF02678 Pirin KFE98_05490 PF05726 Pirin C-terminal cupin domain KFE98_05525 PF02666 Phosphatidylserine decarboxylase KFE98_05535 PF00561 alpha/beta hydrolase fold KFE98_05555 PF00005 ABC transporter KFE98_05565 PF02630 SCO1/SenC KFE98_05590 PF01925 Sulfite exporter TauE/SafE KFE98_05600 PF00753 Metallo-beta-lactamase superfamily KFE98_05615 PF01494 FAD binding domain KFE98_05620 PF00266 Aminotransferase class-V KFE98_05625 PF00202 Aminotransferase class-III KFE98_05655 PF00072 Response regulator receiver domain KFE98_05655 PF00486 Transcriptional regulatory protein, C terminal KFE98_05660 PF16736 Single Cache-like KFE98_05660 PF00989 PAS fold KFE98_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_05660 PF00512 His Kinase A (phospho-acceptor) domain KFE98_05680 PF14765 Polyketide synthase dehydratase KFE98_05680 PF02801 Beta-ketoacyl synthase, C-terminal domain KFE98_05680 PF08659 KR domain KFE98_05680 PF00109 Beta-ketoacyl synthase, N-terminal domain KFE98_05680 PF00550 Phosphopantetheine attachment site KFE98_05680 PF08240 Alcohol dehydrogenase GroES-like domain KFE98_05680 PF00698 Acyl transferase domain KFE98_05680 PF16197 Ketoacyl-synthetase C-terminal extension KFE98_05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_05690 PF13188 PAS domain KFE98_05690 PF13426 PAS domain KFE98_05715 PF00005 ABC transporter KFE98_05715 PF02687 FtsX-like permease family KFE98_05715 PF12704 MacB-like periplasmic core domain KFE98_05720 PF00005 ABC transporter KFE98_05720 PF02687 FtsX-like permease family KFE98_05720 PF12704 MacB-like periplasmic core domain KFE98_05725 PF00378 Enoyl-CoA hydratase/isomerase KFE98_05730 PF00989 PAS fold KFE98_05730 PF00512 His Kinase A (phospho-acceptor) domain KFE98_05730 PF00672 HAMP domain KFE98_05730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_05750 PF01494 FAD binding domain KFE98_05755 PF00221 Aromatic amino acid lyase KFE98_05765 PF00109 Beta-ketoacyl synthase, N-terminal domain KFE98_05765 PF02801 Beta-ketoacyl synthase, C-terminal domain KFE98_05770 PF00550 Phosphopantetheine attachment site KFE98_05785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KFE98_05785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KFE98_05790 PF07977 FabA-like domain KFE98_05810 PF00005 ABC transporter KFE98_05825 PF04542 Sigma-70 region 2 KFE98_05825 PF08281 Sigma-70, region 4 KFE98_05825 PF12680 SnoaL-like domain KFE98_05875 PF00550 Phosphopantetheine attachment site KFE98_05880 PF02801 Beta-ketoacyl synthase, C-terminal domain KFE98_05880 PF00109 Beta-ketoacyl synthase, N-terminal domain KFE98_05890 PF01522 Polysaccharide deacetylase KFE98_05905 PF07977 FabA-like domain KFE98_05925 PF01593 Flavin containing amine oxidoreductase KFE98_05930 PF14602 Hexapeptide repeat of succinyl-transferase KFE98_05930 PF00483 Nucleotidyl transferase KFE98_05930 PF00132 Bacterial transferase hexapeptide (six repeats) KFE98_05950 PF00144 Beta-lactamase KFE98_05980 PF00291 Pyridoxal-phosphate dependent enzyme KFE98_05990 PF00571 CBS domain KFE98_05990 PF01769 Divalent cation transporter KFE98_05990 PF03448 MgtE intracellular N domain KFE98_05995 PF00398 Ribosomal RNA adenine dimethylase KFE98_06015 PF02403 Seryl-tRNA synthetase N-terminal domain KFE98_06015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KFE98_06020 PF01016 Ribosomal L27 protein KFE98_06025 PF00829 Ribosomal prokaryotic L21 protein KFE98_06035 PF00892 EamA-like transporter family KFE98_06040 PF00005 ABC transporter KFE98_06050 PF00005 ABC transporter KFE98_06055 PF02405 Permease MlaE KFE98_06065 PF00483 Nucleotidyl transferase KFE98_06065 PF01050 Mannose-6-phosphate isomerase KFE98_06070 PF12146 Serine aminopeptidase, S33 KFE98_06075 PF10415 Fumarase C C-terminus KFE98_06075 PF00206 Lyase KFE98_06085 PF03960 ArsC family KFE98_06100 PF02631 RecX family KFE98_06105 PF10150 Ribonuclease E/G family KFE98_06105 PF00575 S1 RNA binding domain KFE98_06115 PF00216 Bacterial DNA-binding protein KFE98_06120 PF14815 NUDIX domain KFE98_06120 PF00730 HhH-GPD superfamily base excision DNA repair protein KFE98_06120 PF00633 Helix-hairpin-helix motif KFE98_06125 PF00436 Single-strand binding protein family KFE98_06130 PF03471 Transporter associated domain KFE98_06130 PF00571 CBS domain KFE98_06140 PF02628 Cytochrome oxidase assembly protein KFE98_06150 PF00902 Sec-independent protein translocase protein (TatC) KFE98_06160 PF00005 ABC transporter KFE98_06160 PF12399 Branched-chain amino acid ATP-binding cassette transporter KFE98_06190 PF00271 Helicase conserved C-terminal domain KFE98_06190 PF00270 DEAD/DEAH box helicase KFE98_06195 PF00487 Fatty acid desaturase KFE98_06210 PF00512 His Kinase A (phospho-acceptor) domain KFE98_06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_06215 PF00072 Response regulator receiver domain KFE98_06215 PF00196 Bacterial regulatory proteins, luxR family KFE98_06230 PF12706 Beta-lactamase superfamily domain KFE98_06250 PF03309 Type III pantothenate kinase KFE98_06275 PF00571 CBS domain KFE98_06275 PF03471 Transporter associated domain KFE98_06275 PF01595 Cyclin M transmembrane N-terminal domain KFE98_06280 PF00639 PPIC-type PPIASE domain KFE98_06280 PF09312 SurA N-terminal domain KFE98_06290 PF08264 Anticodon-binding domain of tRNA KFE98_06290 PF13603 Leucyl-tRNA synthetase, Domain 2 KFE98_06290 PF09334 tRNA synthetases class I (M) KFE98_06295 PF18075 FtsX extracellular domain KFE98_06305 PF02673 Bacitracin resistance protein BacA KFE98_06310 PF16198 tRNA pseudouridylate synthase B C-terminal domain KFE98_06310 PF01509 TruB family pseudouridylate synthase (N terminal domain) KFE98_06315 PF00989 PAS fold KFE98_06315 PF00512 His Kinase A (phospho-acceptor) domain KFE98_06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_06320 PF06969 HemN C-terminal domain KFE98_06320 PF04055 Radical SAM superfamily KFE98_06340 PF00942 Cellulose binding domain KFE98_06340 PF03442 Carbohydrate binding domain X2 KFE98_06370 PF00162 Phosphoglycerate kinase KFE98_06380 PF04468 PSP1 C-terminal conserved region KFE98_06390 PF00231 ATP synthase KFE98_06395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFE98_06395 PF00306 ATP synthase alpha/beta chain, C terminal domain KFE98_06395 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFE98_06400 PF00213 ATP synthase delta (OSCP) subunit KFE98_06405 PF00430 ATP synthase B/B' CF(0) KFE98_06410 PF00137 ATP synthase subunit C KFE98_06415 PF00119 ATP synthase A chain KFE98_06430 PF02416 mttA/Hcf106 family KFE98_06435 PF01425 Amidase KFE98_06460 PF00294 pfkB family carbohydrate kinase KFE98_06470 PF00330 Aconitase family (aconitate hydratase) KFE98_06470 PF06434 Aconitate hydratase 2 N-terminus KFE98_06470 PF11791 Aconitate B N-terminal domain KFE98_06480 PF01638 HxlR-like helix-turn-helix KFE98_06485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KFE98_06485 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KFE98_06515 PF01638 HxlR-like helix-turn-helix KFE98_06520 PF00561 alpha/beta hydrolase fold KFE98_06535 PF00561 alpha/beta hydrolase fold KFE98_06545 PF00211 Adenylate and Guanylate cyclase catalytic domain KFE98_06595 PF00083 Sugar (and other) transporter KFE98_06615 PF00295 Glycosyl hydrolases family 28 KFE98_06620 PF02686 Glu-tRNAGln amidotransferase C subunit KFE98_06625 PF01553 Acyltransferase KFE98_06625 PF00501 AMP-binding enzyme KFE98_06630 PF00579 tRNA synthetases class I (W and Y) KFE98_06645 PF04542 Sigma-70 region 2 KFE98_06645 PF08281 Sigma-70, region 4 KFE98_06655 PF03653 Uncharacterised protein family (UPF0093) KFE98_06660 PF03061 Thioesterase superfamily KFE98_06680 PF01551 Peptidase family M23 KFE98_06685 PF00289 Biotin carboxylase, N-terminal domain KFE98_06685 PF02785 Biotin carboxylase C-terminal domain KFE98_06685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFE98_06690 PF00364 Biotin-requiring enzyme KFE98_06695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KFE98_06695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KFE98_06700 PF02504 Fatty acid synthesis protein KFE98_06705 PF01783 Ribosomal L32p protein family KFE98_06720 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KFE98_06725 PF02789 Cytosol aminopeptidase family, N-terminal domain KFE98_06725 PF00883 Cytosol aminopeptidase family, catalytic domain KFE98_06730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KFE98_06735 PF04209 homogentisate 1,2-dioxygenase KFE98_06750 PF01370 NAD dependent epimerase/dehydratase family KFE98_06755 PF04389 Peptidase family M28 KFE98_06775 PF00075 RNase H KFE98_06780 PF02780 Transketolase, C-terminal domain KFE98_06780 PF02779 Transketolase, pyrimidine binding domain KFE98_06780 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KFE98_06790 PF00085 Thioredoxin KFE98_06805 PF01996 F420-0:Gamma-glutamyl ligase KFE98_06805 PF00881 Nitroreductase family KFE98_06810 PF00551 Formyl transferase KFE98_06815 PF00924 Mechanosensitive ion channel KFE98_06815 PF05552 Conserved TM helix KFE98_06860 PF18152 DAHP synthase ferredoxin-like domain KFE98_06860 PF00793 DAHP synthetase I family KFE98_06870 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KFE98_06870 PF03900 Porphobilinogen deaminase, C-terminal domain KFE98_06875 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KFE98_06875 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KFE98_06875 PF01488 Shikimate / quinate 5-dehydrogenase KFE98_06895 PF01522 Polysaccharide deacetylase KFE98_06930 PF02472 Biopolymer transport protein ExbD/TolR KFE98_06940 PF01618 MotA/TolQ/ExbB proton channel family KFE98_06955 PF00710 Asparaginase, N-terminal KFE98_06955 PF17763 Glutaminase/Asparaginase C-terminal domain KFE98_06960 PF01026 TatD related DNase KFE98_06975 PF02481 DNA recombination-mediator protein A KFE98_06975 PF17782 DprA winged helix domain KFE98_06980 PF12794 Mechanosensitive ion channel inner membrane domain 1 KFE98_06980 PF12795 Mechanosensitive ion channel porin domain KFE98_06980 PF00924 Mechanosensitive ion channel KFE98_06990 PF01062 Bestrophin, RFP-TM, chloride channel KFE98_07025 PF00171 Aldehyde dehydrogenase family KFE98_07040 PF17820 PDZ domain KFE98_07040 PF02163 Peptidase family M50 KFE98_07045 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KFE98_07045 PF13288 DXP reductoisomerase C-terminal domain KFE98_07045 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KFE98_07070 PF04794 YdjC-like protein KFE98_07075 PF08241 Methyltransferase domain KFE98_07080 PF01252 Signal peptidase (SPase) II KFE98_07085 PF01258 Prokaryotic dksA/traR C4-type zinc finger KFE98_07090 PF00133 tRNA synthetases class I (I, L, M and V) KFE98_07090 PF08264 Anticodon-binding domain of tRNA KFE98_07100 PF13932 GidA associated domain KFE98_07100 PF01134 Glucose inhibited division protein A KFE98_07105 PF02130 Uncharacterized protein family UPF0054 KFE98_07110 PF13581 Histidine kinase-like ATPase domain KFE98_07120 PF00749 tRNA synthetases class I (E and Q), catalytic domain KFE98_07125 PF02152 Dihydroneopterin aldolase KFE98_07135 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KFE98_07145 PF02502 Ribose/Galactose Isomerase KFE98_07165 PF13186 Iron-sulfur cluster-binding domain KFE98_07165 PF04055 Radical SAM superfamily KFE98_07170 PF00210 Ferritin-like domain KFE98_07175 PF17876 Cold shock domain KFE98_07175 PF08206 Ribonuclease B OB domain KFE98_07175 PF00773 RNB domain KFE98_07175 PF00575 S1 RNA binding domain KFE98_07180 PF00476 DNA polymerase family A KFE98_07180 PF01367 5'-3' exonuclease, C-terminal SAM fold KFE98_07180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KFE98_07180 PF01612 3'-5' exonuclease KFE98_07190 PF01144 Coenzyme A transferase KFE98_07200 PF01144 Coenzyme A transferase KFE98_07215 PF00384 Molybdopterin oxidoreductase KFE98_07215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KFE98_07215 PF01568 Molydopterin dinucleotide binding domain KFE98_07230 PF13247 4Fe-4S dicluster domain KFE98_07230 PF00037 4Fe-4S binding domain KFE98_07245 PF17954 Quercetinase C-terminal cupin domain KFE98_07245 PF02678 Pirin KFE98_07250 PF00881 Nitroreductase family KFE98_07260 PF07730 Histidine kinase KFE98_07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_07260 PF05384 Sensor protein DegS KFE98_07265 PF00196 Bacterial regulatory proteins, luxR family KFE98_07265 PF00072 Response regulator receiver domain KFE98_07285 PF00953 Glycosyl transferase family 4 KFE98_07295 PF00534 Glycosyl transferases group 1 KFE98_07295 PF13439 Glycosyltransferase Family 4 KFE98_07305 PF00132 Bacterial transferase hexapeptide (six repeats) KFE98_07330 PF13614 AAA domain KFE98_07330 PF02706 Chain length determinant protein KFE98_07330 PF13807 G-rich domain on putative tyrosine kinase KFE98_07335 PF02563 Polysaccharide biosynthesis/export protein KFE98_07335 PF10531 SLBB domain KFE98_07335 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KFE98_07340 PF02954 Bacterial regulatory protein, Fis family KFE98_07340 PF00072 Response regulator receiver domain KFE98_07340 PF00158 Sigma-54 interaction domain KFE98_07345 PF00072 Response regulator receiver domain KFE98_07345 PF00989 PAS fold KFE98_07345 PF01627 Hpt domain KFE98_07345 PF00512 His Kinase A (phospho-acceptor) domain KFE98_07345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_07345 PF18415 Histidine kinase receptor ArcB trans-membrane domain KFE98_07355 PF02954 Bacterial regulatory protein, Fis family KFE98_07355 PF00072 Response regulator receiver domain KFE98_07355 PF00158 Sigma-54 interaction domain KFE98_07405 PF07494 Two component regulator propeller KFE98_07405 PF12833 Helix-turn-helix domain KFE98_07405 PF00512 His Kinase A (phospho-acceptor) domain KFE98_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_07405 PF00072 Response regulator receiver domain KFE98_07405 PF07495 Y_Y_Y domain KFE98_07410 PF00072 Response regulator receiver domain KFE98_07410 PF00486 Transcriptional regulatory protein, C terminal KFE98_07450 PF00005 ABC transporter KFE98_07450 PF12848 ABC transporter KFE98_07465 PF00905 Penicillin binding protein transpeptidase domain KFE98_07465 PF00912 Transglycosylase KFE98_07480 PF01047 MarR family KFE98_07495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KFE98_07500 PF00117 Glutamine amidotransferase class-I KFE98_07525 PF02743 Cache domain KFE98_07525 PF00672 HAMP domain KFE98_07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_07525 PF06580 Histidine kinase KFE98_07570 PF00282 Pyridoxal-dependent decarboxylase conserved domain KFE98_07610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KFE98_07610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KFE98_07630 PF07075 Protein of unknown function (DUF1343) KFE98_07635 PF01757 Acyltransferase family KFE98_07640 PF01915 Glycosyl hydrolase family 3 C-terminal domain KFE98_07640 PF00933 Glycosyl hydrolase family 3 N terminal domain KFE98_07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_07660 PF07730 Histidine kinase KFE98_07665 PF00072 Response regulator receiver domain KFE98_07665 PF00196 Bacterial regulatory proteins, luxR family KFE98_07675 PF06580 Histidine kinase KFE98_07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_07680 PF00072 Response regulator receiver domain KFE98_07680 PF04397 LytTr DNA-binding domain KFE98_07700 PF13419 Haloacid dehalogenase-like hydrolase KFE98_07705 PF01008 Initiation factor 2 subunit family KFE98_07745 PF02774 Semialdehyde dehydrogenase, dimerisation domain KFE98_07745 PF01118 Semialdehyde dehydrogenase, NAD binding domain KFE98_07755 PF02272 DHHA1 domain KFE98_07755 PF17768 RecJ OB domain KFE98_07755 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KFE98_07755 PF01368 DHH family KFE98_07785 PF00171 Aldehyde dehydrogenase family KFE98_07790 PF00654 Voltage gated chloride channel KFE98_07795 PF12794 Mechanosensitive ion channel inner membrane domain 1 KFE98_07795 PF00924 Mechanosensitive ion channel KFE98_07795 PF12795 Mechanosensitive ion channel porin domain KFE98_07800 PF01807 CHC2 zinc finger KFE98_07800 PF10410 DnaB-helicase binding domain of primase KFE98_07800 PF08275 DNA primase catalytic core, N-terminal domain KFE98_07825 PF01464 Transglycosylase SLT domain KFE98_07835 PF02565 Recombination protein O C terminal KFE98_07835 PF11967 Recombination protein O N terminal KFE98_07845 PF00106 short chain dehydrogenase KFE98_07850 PF01053 Cys/Met metabolism PLP-dependent enzyme KFE98_07870 PF11954 Domain of unknown function (DUF3471) KFE98_07870 PF00144 Beta-lactamase KFE98_07875 PF01042 Endoribonuclease L-PSP KFE98_07895 PF03881 Fructosamine kinase KFE98_07900 PF02547 Queuosine biosynthesis protein KFE98_07905 PF01207 Dihydrouridine synthase (Dus) KFE98_07920 PF00326 Prolyl oligopeptidase family KFE98_07920 PF07676 WD40-like Beta Propeller Repeat KFE98_07920 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KFE98_07940 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KFE98_07940 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KFE98_07960 PF02843 Phosphoribosylglycinamide synthetase, C domain KFE98_07960 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KFE98_07960 PF02844 Phosphoribosylglycinamide synthetase, N domain KFE98_07965 PF04055 Radical SAM superfamily KFE98_07965 PF06463 Molybdenum Cofactor Synthesis C KFE98_07990 PF16859 Tetracyclin repressor-like, C-terminal domain KFE98_07990 PF00440 Bacterial regulatory proteins, tetR family KFE98_08015 PF08279 HTH domain KFE98_08015 PF13280 WYL domain KFE98_08020 PF05384 Sensor protein DegS KFE98_08020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_08020 PF07730 Histidine kinase KFE98_08025 PF00072 Response regulator receiver domain KFE98_08025 PF00196 Bacterial regulatory proteins, luxR family KFE98_08045 PF00106 short chain dehydrogenase KFE98_08050 PF00171 Aldehyde dehydrogenase family KFE98_08065 PF00881 Nitroreductase family KFE98_08070 PF00465 Iron-containing alcohol dehydrogenase KFE98_08085 PF07730 Histidine kinase KFE98_08085 PF05231 MASE1 KFE98_08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_08090 PF00196 Bacterial regulatory proteins, luxR family KFE98_08090 PF00072 Response regulator receiver domain KFE98_08125 PF01183 Glycosyl hydrolases family 25 KFE98_08125 PF01471 Putative peptidoglycan binding domain KFE98_08140 PF12833 Helix-turn-helix domain KFE98_08140 PF00072 Response regulator receiver domain KFE98_08170 PF12833 Helix-turn-helix domain KFE98_08170 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFE98_08240 PF00196 Bacterial regulatory proteins, luxR family KFE98_08240 PF00072 Response regulator receiver domain KFE98_08245 PF03109 ABC1 family KFE98_08260 PF08713 DNA alkylation repair enzyme KFE98_08270 PF07694 5TMR of 5TMR-LYT KFE98_08270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_08270 PF06580 Histidine kinase KFE98_08275 PF00072 Response regulator receiver domain KFE98_08275 PF04397 LytTr DNA-binding domain KFE98_08300 PF01066 CDP-alcohol phosphatidyltransferase KFE98_08325 PF00266 Aminotransferase class-V KFE98_08340 PF00106 short chain dehydrogenase KFE98_08350 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KFE98_08360 PF04542 Sigma-70 region 2 KFE98_08360 PF08281 Sigma-70, region 4 KFE98_08365 PF01545 Cation efflux family KFE98_08395 PF13396 Phospholipase_D-nuclease N-terminal KFE98_08395 PF13091 PLD-like domain KFE98_08415 PF00152 tRNA synthetases class II (D, K and N) KFE98_08415 PF01336 OB-fold nucleic acid binding domain KFE98_08420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFE98_08420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KFE98_08435 PF03301 Tryptophan 2,3-dioxygenase KFE98_08440 PF00082 Subtilase family KFE98_08445 PF06491 Disulphide isomerase KFE98_08450 PF02887 Pyruvate kinase, alpha/beta domain KFE98_08450 PF00224 Pyruvate kinase, barrel domain KFE98_08460 PF14622 Ribonuclease-III-like KFE98_08460 PF00035 Double-stranded RNA binding motif KFE98_08465 PF00035 Double-stranded RNA binding motif KFE98_08465 PF14622 Ribonuclease-III-like KFE98_08470 PF00109 Beta-ketoacyl synthase, N-terminal domain KFE98_08470 PF02801 Beta-ketoacyl synthase, C-terminal domain KFE98_08475 PF00550 Phosphopantetheine attachment site KFE98_08480 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KFE98_08480 PF01409 tRNA synthetases class II core domain (F) KFE98_08490 PF02151 UvrB/uvrC motif KFE98_08490 PF08459 UvrC Helix-hairpin-helix N-terminal KFE98_08490 PF01541 GIY-YIG catalytic domain KFE98_08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_08500 PF00512 His Kinase A (phospho-acceptor) domain KFE98_08500 PF08448 PAS fold KFE98_08500 PF13188 PAS domain KFE98_08500 PF00072 Response regulator receiver domain KFE98_08500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_08505 PF01209 ubiE/COQ5 methyltransferase family KFE98_08515 PF02954 Bacterial regulatory protein, Fis family KFE98_08515 PF00072 Response regulator receiver domain KFE98_08515 PF00158 Sigma-54 interaction domain KFE98_08525 PF00309 Sigma-54 factor, Activator interacting domain (AID) KFE98_08525 PF04552 Sigma-54, DNA binding domain KFE98_08525 PF04963 Sigma-54 factor, core binding domain KFE98_08530 PF00152 tRNA synthetases class II (D, K and N) KFE98_08530 PF01336 OB-fold nucleic acid binding domain KFE98_08540 PF02321 Outer membrane efflux protein KFE98_08560 PF02687 FtsX-like permease family KFE98_08560 PF00005 ABC transporter KFE98_08560 PF12704 MacB-like periplasmic core domain KFE98_08570 PF01171 PP-loop family KFE98_08585 PF00317 Ribonucleotide reductase, all-alpha domain KFE98_08585 PF02867 Ribonucleotide reductase, barrel domain KFE98_08585 PF03477 ATP cone domain KFE98_08605 PF00939 Sodium:sulfate symporter transmembrane region KFE98_08620 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KFE98_08620 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KFE98_08625 PF01467 Cytidylyltransferase-like KFE98_08630 PF00625 Guanylate kinase KFE98_08635 PF08340 Domain of unknown function (DUF1732) KFE98_08635 PF03755 YicC-like family, N-terminal region KFE98_08675 PF01433 Peptidase family M1 domain KFE98_08675 PF11838 ERAP1-like C-terminal domain KFE98_08685 PF00364 Biotin-requiring enzyme KFE98_08690 PF00486 Transcriptional regulatory protein, C terminal KFE98_08690 PF00072 Response regulator receiver domain KFE98_08695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_08695 PF00512 His Kinase A (phospho-acceptor) domain KFE98_08705 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain KFE98_08705 PF01380 SIS domain KFE98_08710 PF03099 Biotin/lipoate A/B protein ligase family KFE98_08730 PF13180 PDZ domain KFE98_08730 PF03572 Peptidase family S41 KFE98_08735 PF02547 Queuosine biosynthesis protein KFE98_08740 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KFE98_08745 PF04055 Radical SAM superfamily KFE98_08750 PF00348 Polyprenyl synthetase KFE98_08755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFE98_08755 PF02770 Acyl-CoA dehydrogenase, middle domain KFE98_08755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFE98_08790 PF00825 Ribonuclease P KFE98_08795 PF03572 Peptidase family S41 KFE98_08795 PF13180 PDZ domain KFE98_08810 PF00535 Glycosyl transferase family 2 KFE98_08815 PF16078 2-oxoglutarate dehydrogenase N-terminus KFE98_08815 PF00676 Dehydrogenase E1 component KFE98_08815 PF16870 2-oxoglutarate dehydrogenase C-terminal KFE98_08815 PF02779 Transketolase, pyrimidine binding domain KFE98_08820 PF02817 e3 binding domain KFE98_08820 PF00364 Biotin-requiring enzyme KFE98_08820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KFE98_08830 PF02743 Cache domain KFE98_08830 PF00672 HAMP domain KFE98_08830 PF06580 Histidine kinase KFE98_08830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_08835 PF00072 Response regulator receiver domain KFE98_08835 PF04397 LytTr DNA-binding domain KFE98_08860 PF00156 Phosphoribosyl transferase domain KFE98_08865 PF02142 MGS-like domain KFE98_08865 PF01808 AICARFT/IMPCHase bienzyme KFE98_08885 PF00905 Penicillin binding protein transpeptidase domain KFE98_08890 PF01098 Cell cycle protein KFE98_08895 PF01106 NifU-like domain KFE98_08935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFE98_08935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFE98_08940 PF13457 GW (Gly-Tryp) dipeptide domain KFE98_08940 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KFE98_08960 PF17391 Urocanase N-terminal domain KFE98_08960 PF17392 Urocanase C-terminal domain KFE98_08960 PF01175 Urocanase Rossmann-like domain KFE98_08985 PF03147 Ferredoxin-fold anticodon binding domain KFE98_08985 PF03483 B3/4 domain KFE98_08985 PF01588 Putative tRNA binding domain KFE98_08985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KFE98_08985 PF03484 tRNA synthetase B5 domain KFE98_08995 PF00270 DEAD/DEAH box helicase KFE98_08995 PF17191 RecG wedge domain KFE98_08995 PF00271 Helicase conserved C-terminal domain KFE98_09020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFE98_09030 PF00265 Thymidine kinase KFE98_09035 PF00842 Alanine racemase, C-terminal domain KFE98_09035 PF01168 Alanine racemase, N-terminal domain KFE98_09050 PF01551 Peptidase family M23 KFE98_09055 PF01327 Polypeptide deformylase KFE98_09065 PF00156 Phosphoribosyl transferase domain KFE98_09075 PF02769 AIR synthase related protein, C-terminal domain KFE98_09075 PF00586 AIR synthase related protein, N-terminal domain KFE98_09085 PF01521 Iron-sulphur cluster biosynthesis KFE98_09090 PF01458 Uncharacterized protein family (UPF0051) KFE98_09100 PF00005 ABC transporter KFE98_09105 PF01458 Uncharacterized protein family (UPF0051) KFE98_09110 PF00266 Aminotransferase class-V KFE98_09115 PF02657 Fe-S metabolism associated domain KFE98_09120 PF01883 Iron-sulfur cluster assembly protein KFE98_09130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_09130 PF07694 5TMR of 5TMR-LYT KFE98_09130 PF06580 Histidine kinase KFE98_09135 PF04397 LytTr DNA-binding domain KFE98_09135 PF00072 Response regulator receiver domain KFE98_09145 PF12697 Alpha/beta hydrolase family KFE98_09150 PF05195 Aminopeptidase P, N-terminal domain KFE98_09150 PF00557 Metallopeptidase family M24 KFE98_09165 PF13085 2Fe-2S iron-sulfur cluster binding domain KFE98_09170 PF00155 Aminotransferase class I and II KFE98_09175 PF00795 Carbon-nitrogen hydrolase KFE98_09185 PF13185 GAF domain KFE98_09210 PF00677 Lumazine binding domain KFE98_09220 PF00158 Sigma-54 interaction domain KFE98_09220 PF00072 Response regulator receiver domain KFE98_09220 PF02954 Bacterial regulatory protein, Fis family KFE98_09235 PF00664 ABC transporter transmembrane region KFE98_09235 PF00005 ABC transporter KFE98_09240 PF02033 Ribosome-binding factor A KFE98_09245 PF02687 FtsX-like permease family KFE98_09245 PF12704 MacB-like periplasmic core domain KFE98_09255 PF03447 Homoserine dehydrogenase, NAD binding domain KFE98_09255 PF00696 Amino acid kinase family KFE98_09255 PF00742 Homoserine dehydrogenase KFE98_09280 PF04715 Anthranilate synthase component I, N terminal region KFE98_09280 PF00425 chorismate binding enzyme KFE98_09285 PF00762 Ferrochelatase KFE98_09305 PF01066 CDP-alcohol phosphatidyltransferase KFE98_09320 PF01195 Peptidyl-tRNA hydrolase KFE98_09325 PF01386 Ribosomal L25p family KFE98_09325 PF14693 Ribosomal protein TL5, C-terminal domain KFE98_09330 PF14572 Phosphoribosyl synthetase-associated domain KFE98_09330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KFE98_09340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KFE98_09340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KFE98_09345 PF00155 Aminotransferase class I and II KFE98_09385 PF09424 Yqey-like protein KFE98_09390 PF12327 FtsZ family, C-terminal domain KFE98_09390 PF00091 Tubulin/FtsZ family, GTPase domain KFE98_09395 PF02491 SHS2 domain inserted in FTSA KFE98_09405 PF01225 Mur ligase family, catalytic domain KFE98_09405 PF02875 Mur ligase family, glutamate ligase domain KFE98_09405 PF08245 Mur ligase middle domain KFE98_09410 PF03033 Glycosyltransferase family 28 N-terminal domain KFE98_09410 PF04101 Glycosyltransferase family 28 C-terminal domain KFE98_09415 PF01098 Cell cycle protein KFE98_09420 PF02875 Mur ligase family, glutamate ligase domain KFE98_09420 PF08245 Mur ligase middle domain KFE98_09425 PF00953 Glycosyl transferase family 4 KFE98_09425 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KFE98_09430 PF01225 Mur ligase family, catalytic domain KFE98_09430 PF02875 Mur ligase family, glutamate ligase domain KFE98_09430 PF08245 Mur ligase middle domain KFE98_09435 PF03717 Penicillin-binding Protein dimerisation domain KFE98_09435 PF00905 Penicillin binding protein transpeptidase domain KFE98_09445 PF01795 MraW methylase family KFE98_09450 PF02381 MraZ protein, putative antitoxin-like KFE98_09460 PF01926 50S ribosome-binding GTPase KFE98_09480 PF02540 NAD synthase KFE98_09485 PF00578 AhpC/TSA family KFE98_09490 PF00365 Phosphofructokinase KFE98_09505 PF07715 TonB-dependent Receptor Plug Domain KFE98_09505 PF00593 TonB dependent receptor KFE98_09510 PF00679 Elongation factor G C-terminus KFE98_09510 PF00009 Elongation factor Tu GTP binding domain KFE98_09510 PF03144 Elongation factor Tu domain 2 KFE98_09510 PF06421 GTP-binding protein LepA C-terminus KFE98_09520 PF00005 ABC transporter KFE98_09525 PF02219 Methylenetetrahydrofolate reductase KFE98_09530 PF01177 Asp/Glu/Hydantoin racemase KFE98_09555 PF01255 Putative undecaprenyl diphosphate synthase KFE98_09570 PF01513 ATP-NAD kinase KFE98_09580 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KFE98_09625 PF00535 Glycosyl transferase family 2 KFE98_09630 PF01979 Amidohydrolase family KFE98_09650 PF02719 Polysaccharide biosynthesis protein KFE98_09650 PF08485 Polysaccharide biosynthesis protein C-terminal KFE98_09665 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family KFE98_09670 PF07969 Amidohydrolase family KFE98_09685 PF00293 NUDIX domain KFE98_09695 PF00579 tRNA synthetases class I (W and Y) KFE98_09725 PF02875 Mur ligase family, glutamate ligase domain KFE98_09725 PF08245 Mur ligase middle domain KFE98_09735 PF02472 Biopolymer transport protein ExbD/TolR KFE98_09740 PF01618 MotA/TolQ/ExbB proton channel family KFE98_09745 PF03600 Citrate transporter KFE98_09750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KFE98_09750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KFE98_09755 PF03702 Anhydro-N-acetylmuramic acid kinase KFE98_09760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFE98_09760 PF02770 Acyl-CoA dehydrogenase, middle domain KFE98_09760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFE98_09765 PF01926 50S ribosome-binding GTPase KFE98_09765 PF13167 GTP-binding GTPase N-terminal KFE98_09765 PF16360 GTP-binding GTPase Middle Region KFE98_09780 PF03979 Sigma-70 factor, region 1.1 KFE98_09780 PF00140 Sigma-70 factor, region 1.2 KFE98_09780 PF04542 Sigma-70 region 2 KFE98_09780 PF04539 Sigma-70 region 3 KFE98_09780 PF04545 Sigma-70, region 4 KFE98_09790 PF00132 Bacterial transferase hexapeptide (six repeats) KFE98_09805 PF01380 SIS domain KFE98_09815 PF00534 Glycosyl transferases group 1 KFE98_09815 PF08323 Starch synthase catalytic domain KFE98_09820 PF02569 Pantoate-beta-alanine ligase KFE98_09825 PF02261 Aspartate decarboxylase KFE98_09835 PF00294 pfkB family carbohydrate kinase KFE98_09835 PF01467 Cytidylyltransferase-like KFE98_09840 PF18073 Rubredoxin metal binding domain KFE98_09850 PF03129 Anticodon binding domain KFE98_09855 PF01225 Mur ligase family, catalytic domain KFE98_09855 PF02875 Mur ligase family, glutamate ligase domain KFE98_09855 PF08245 Mur ligase middle domain KFE98_09860 PF03781 Sulfatase-modifying factor enzyme 1 KFE98_09885 PF02542 YgbB family KFE98_09895 PF00676 Dehydrogenase E1 component KFE98_09900 PF00364 Biotin-requiring enzyme KFE98_09900 PF02817 e3 binding domain KFE98_09900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KFE98_09905 PF04101 Glycosyltransferase family 28 C-terminal domain KFE98_09905 PF03033 Glycosyltransferase family 28 N-terminal domain KFE98_09910 PF00106 short chain dehydrogenase KFE98_09915 PF02390 Putative methyltransferase KFE98_09920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KFE98_09925 PF01883 Iron-sulfur cluster assembly protein KFE98_09925 PF10609 NUBPL iron-transfer P-loop NTPase KFE98_09930 PF01106 NifU-like domain KFE98_09935 PF00535 Glycosyl transferase family 2 KFE98_09940 PF13580 SIS domain KFE98_09955 PF00118 TCP-1/cpn60 chaperonin family KFE98_09960 PF00166 Chaperonin 10 Kd subunit KFE98_09980 PF00158 Sigma-54 interaction domain KFE98_09980 PF02954 Bacterial regulatory protein, Fis family KFE98_09980 PF06490 Flagellar regulatory protein FleQ KFE98_09985 PF04055 Radical SAM superfamily KFE98_09985 PF00919 Uncharacterized protein family UPF0004 KFE98_09985 PF01938 TRAM domain KFE98_10010 PF03781 Sulfatase-modifying factor enzyme 1 KFE98_10045 PF16363 GDP-mannose 4,6 dehydratase KFE98_10050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KFE98_10050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KFE98_10050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KFE98_10055 PF00132 Bacterial transferase hexapeptide (six repeats) KFE98_10060 PF01370 NAD dependent epimerase/dehydratase family KFE98_10065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KFE98_10065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KFE98_10065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KFE98_10070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KFE98_10085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KFE98_10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_10105 PF00512 His Kinase A (phospho-acceptor) domain KFE98_10110 PF00072 Response regulator receiver domain KFE98_10110 PF00486 Transcriptional regulatory protein, C terminal KFE98_10115 PF05698 Bacterial trigger factor protein (TF) C-terminus KFE98_10115 PF05697 Bacterial trigger factor protein (TF) KFE98_10120 PF00574 Clp protease KFE98_10125 PF10431 C-terminal, D2-small domain, of ClpB protein KFE98_10125 PF06689 ClpX C4-type zinc finger KFE98_10125 PF07724 AAA domain (Cdc48 subfamily) KFE98_10130 PF00186 Dihydrofolate reductase KFE98_10135 PF00303 Thymidylate synthase KFE98_10145 PF00082 Subtilase family KFE98_10150 PF07670 Nucleoside recognition KFE98_10150 PF07662 Na+ dependent nucleoside transporter C-terminus KFE98_10150 PF01773 Na+ dependent nucleoside transporter N-terminus KFE98_10160 PF01012 Electron transfer flavoprotein domain KFE98_10160 PF00766 Electron transfer flavoprotein FAD-binding domain KFE98_10165 PF01012 Electron transfer flavoprotein domain KFE98_10170 PF02779 Transketolase, pyrimidine binding domain KFE98_10170 PF02780 Transketolase, C-terminal domain KFE98_10170 PF00364 Biotin-requiring enzyme KFE98_10175 PF03030 Inorganic H+ pyrophosphatase KFE98_10190 PF01712 Deoxynucleoside kinase KFE98_10205 PF01343 Peptidase family S49 KFE98_10210 PF02152 Dihydroneopterin aldolase KFE98_10210 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KFE98_10215 PF01712 Deoxynucleoside kinase KFE98_10235 PF00588 SpoU rRNA Methylase family KFE98_10235 PF08032 RNA 2'-O ribose methyltransferase substrate binding KFE98_10275 PF07568 Histidine kinase KFE98_10275 PF12282 Signal transduction histidine kinase KFE98_10275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_10280 PF04703 FaeA-like protein KFE98_10280 PF00072 Response regulator receiver domain KFE98_10295 PF07694 5TMR of 5TMR-LYT KFE98_10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_10295 PF06580 Histidine kinase KFE98_10295 PF13492 GAF domain KFE98_10325 PF07726 ATPase family associated with various cellular activities (AAA) KFE98_10325 PF17863 AAA lid domain KFE98_10365 PF01062 Bestrophin, RFP-TM, chloride channel KFE98_10390 PF12833 Helix-turn-helix domain KFE98_10390 PF02311 AraC-like ligand binding domain KFE98_10440 PF00072 Response regulator receiver domain KFE98_10445 PF12282 Signal transduction histidine kinase KFE98_10445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_10445 PF07568 Histidine kinase KFE98_10485 PF00512 His Kinase A (phospho-acceptor) domain KFE98_10485 PF00360 Phytochrome region KFE98_10485 PF01590 GAF domain KFE98_10485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_10485 PF08446 PAS fold KFE98_10550 PF00109 Beta-ketoacyl synthase, N-terminal domain KFE98_10550 PF02801 Beta-ketoacyl synthase, C-terminal domain KFE98_10575 PF02525 Flavodoxin-like fold KFE98_10605 PF00082 Subtilase family KFE98_10605 PF01483 Proprotein convertase P-domain KFE98_10660 PF05661 Protein of unknown function (DUF808) KFE98_10675 PF00009 Elongation factor Tu GTP binding domain KFE98_10675 PF14492 Elongation Factor G, domain II KFE98_10675 PF00679 Elongation factor G C-terminus KFE98_10675 PF03144 Elongation factor Tu domain 2 KFE98_10710 PF00106 short chain dehydrogenase KFE98_10715 PF00491 Arginase family KFE98_10735 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KFE98_10750 PF00404 Dockerin type I domain KFE98_10760 PF00535 Glycosyl transferase family 2 KFE98_10770 PF02075 Crossover junction endodeoxyribonuclease RuvC KFE98_10780 PF03449 Transcription elongation factor, N-terminal KFE98_10780 PF01272 Transcription elongation factor, GreA/GreB, C-term KFE98_10815 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KFE98_10815 PF05221 S-adenosyl-L-homocysteine hydrolase KFE98_10825 PF01884 PcrB family KFE98_10880 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KFE98_10895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KFE98_10895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KFE98_10900 PF04116 Fatty acid hydroxylase superfamily KFE98_10905 PF02769 AIR synthase related protein, C-terminal domain KFE98_10905 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KFE98_10905 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KFE98_10915 PF07664 Ferrous iron transport protein B C terminus KFE98_10915 PF02421 Ferrous iron transport protein B KFE98_10915 PF07670 Nucleoside recognition KFE98_10925 PF01979 Amidohydrolase family KFE98_10930 PF00501 AMP-binding enzyme KFE98_10950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KFE98_10950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KFE98_10965 PF00942 Cellulose binding domain KFE98_10965 PF03442 Carbohydrate binding domain X2 KFE98_10970 PF04055 Radical SAM superfamily KFE98_10985 PF02548 Ketopantoate hydroxymethyltransferase KFE98_10990 PF00849 RNA pseudouridylate synthase KFE98_10990 PF01479 S4 domain KFE98_11005 PF04542 Sigma-70 region 2 KFE98_11005 PF08281 Sigma-70, region 4 KFE98_11010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KFE98_11010 PF00056 lactate/malate dehydrogenase, NAD binding domain KFE98_11015 PF07549 SecD/SecF GG Motif KFE98_11015 PF02355 Protein export membrane protein KFE98_11020 PF02416 mttA/Hcf106 family KFE98_11025 PF00120 Glutamine synthetase, catalytic domain KFE98_11025 PF18318 Glutamine synthetase C-terminal domain KFE98_11025 PF12437 Glutamine synthetase type III N terminal KFE98_11030 PF01389 OmpA-like transmembrane domain KFE98_11030 PF00691 OmpA family KFE98_11035 PF02769 AIR synthase related protein, C-terminal domain KFE98_11035 PF00586 AIR synthase related protein, N-terminal domain KFE98_11040 PF03462 PCRF domain KFE98_11040 PF00472 RF-1 domain KFE98_11045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KFE98_11065 PF01235 Sodium:alanine symporter family KFE98_11075 PF00156 Phosphoribosyl transferase domain KFE98_11080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFE98_11080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFE98_11080 PF02770 Acyl-CoA dehydrogenase, middle domain KFE98_11085 PF01165 Ribosomal protein S21 KFE98_11090 PF02899 Phage integrase, N-terminal SAM-like domain KFE98_11090 PF00589 Phage integrase family KFE98_11120 PF00009 Elongation factor Tu GTP binding domain KFE98_11120 PF03144 Elongation factor Tu domain 2 KFE98_11120 PF03143 Elongation factor Tu C-terminal domain KFE98_11135 PF02357 Transcription termination factor nusG KFE98_11135 PF00467 KOW motif KFE98_11140 PF00298 Ribosomal protein L11, RNA binding domain KFE98_11140 PF03946 Ribosomal protein L11, N-terminal domain KFE98_11145 PF00687 Ribosomal protein L1p/L10e family KFE98_11150 PF00466 Ribosomal protein L10 KFE98_11155 PF00542 Ribosomal protein L7/L12 C-terminal domain KFE98_11155 PF16320 Ribosomal protein L7/L12 dimerisation domain KFE98_11160 PF04563 RNA polymerase beta subunit KFE98_11160 PF04561 RNA polymerase Rpb2, domain 2 KFE98_11160 PF04565 RNA polymerase Rpb2, domain 3 KFE98_11160 PF04560 RNA polymerase Rpb2, domain 7 KFE98_11160 PF00562 RNA polymerase Rpb2, domain 6 KFE98_11160 PF10385 RNA polymerase beta subunit external 1 domain KFE98_11165 PF04997 RNA polymerase Rpb1, domain 1 KFE98_11165 PF04998 RNA polymerase Rpb1, domain 5 KFE98_11165 PF05000 RNA polymerase Rpb1, domain 4 KFE98_11165 PF04983 RNA polymerase Rpb1, domain 3 KFE98_11165 PF00623 RNA polymerase Rpb1, domain 2 KFE98_11185 PF00291 Pyridoxal-phosphate dependent enzyme KFE98_11185 PF00571 CBS domain KFE98_11190 PF12704 MacB-like periplasmic core domain KFE98_11190 PF02687 FtsX-like permease family KFE98_11195 PF07075 Protein of unknown function (DUF1343) KFE98_11210 PF02779 Transketolase, pyrimidine binding domain KFE98_11210 PF02780 Transketolase, C-terminal domain KFE98_11250 PF14028 Lantibiotic biosynthesis dehydratase C-term KFE98_11250 PF04738 Lantibiotic dehydratase, N terminus KFE98_11255 PF00664 ABC transporter transmembrane region KFE98_11255 PF00005 ABC transporter KFE98_11255 PF03412 Peptidase C39 family KFE98_11265 PF03631 Virulence factor BrkB KFE98_11280 PF00709 Adenylosuccinate synthetase KFE98_11285 PF01475 Ferric uptake regulator family KFE98_11290 PF02824 TGS domain KFE98_11290 PF13291 ACT domain KFE98_11290 PF04607 Region found in RelA / SpoT proteins KFE98_11300 PF00012 Hsp70 protein KFE98_11310 PF12704 MacB-like periplasmic core domain KFE98_11310 PF02687 FtsX-like permease family KFE98_11315 PF00330 Aconitase family (aconitate hydratase) KFE98_11315 PF00694 Aconitase C-terminal domain KFE98_11335 PF01557 Fumarylacetoacetate (FAA) hydrolase family KFE98_11340 PF00464 Serine hydroxymethyltransferase KFE98_11355 PF00132 Bacterial transferase hexapeptide (six repeats) KFE98_11360 PF00534 Glycosyl transferases group 1 KFE98_11370 PF02719 Polysaccharide biosynthesis protein KFE98_11390 PF08666 SAF domain KFE98_11390 PF03102 NeuB family KFE98_11395 PF00117 Glutamine amidotransferase class-I KFE98_11400 PF00977 Histidine biosynthesis protein KFE98_11440 PF00535 Glycosyl transferase family 2 KFE98_11450 PF13439 Glycosyltransferase Family 4 KFE98_11450 PF00534 Glycosyl transferases group 1 KFE98_11460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KFE98_11460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KFE98_11480 PF00072 Response regulator receiver domain KFE98_11480 PF00486 Transcriptional regulatory protein, C terminal KFE98_11495 PF00425 chorismate binding enzyme KFE98_11500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFE98_11505 PF00378 Enoyl-CoA hydratase/isomerase KFE98_11510 PF01040 UbiA prenyltransferase family KFE98_11525 PF00849 RNA pseudouridylate synthase KFE98_11540 PF01820 D-ala D-ala ligase N-terminus KFE98_11540 PF07478 D-ala D-ala ligase C-terminus KFE98_11545 PF01725 Ham1 family KFE98_11555 PF13673 Acetyltransferase (GNAT) domain KFE98_11560 PF00580 UvrD/REP helicase N-terminal domain KFE98_11560 PF12705 PD-(D/E)XK nuclease superfamily KFE98_11560 PF13361 UvrD-like helicase C-terminal domain KFE98_11580 PF00271 Helicase conserved C-terminal domain KFE98_11580 PF17764 3′ DNA-binding domain (3′BD) KFE98_11580 PF18074 Primosomal protein N C-terminal domain KFE98_11580 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KFE98_11580 PF04851 Type III restriction enzyme, res subunit KFE98_11600 PF05114 Protein of unknown function (DUF692) KFE98_11625 PF03641 Possible lysine decarboxylase KFE98_11640 PF02222 ATP-grasp domain KFE98_11640 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KFE98_11655 PF13180 PDZ domain KFE98_11660 PF01596 O-methyltransferase KFE98_11665 PF01212 Beta-eliminating lyase KFE98_11690 PF01784 NIF3 (NGG1p interacting factor 3) KFE98_11695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KFE98_11700 PF01048 Phosphorylase superfamily KFE98_11705 PF02637 GatB domain KFE98_11705 PF02934 GatB/GatE catalytic domain KFE98_11710 PF00578 AhpC/TSA family KFE98_11725 PF11838 ERAP1-like C-terminal domain KFE98_11725 PF01433 Peptidase family M1 domain KFE98_11735 PF01281 Ribosomal protein L9, N-terminal domain KFE98_11735 PF03948 Ribosomal protein L9, C-terminal domain KFE98_11740 PF01084 Ribosomal protein S18 KFE98_11745 PF01250 Ribosomal protein S6 KFE98_11755 PF12169 DNA polymerase III subunits gamma and tau domain III KFE98_11770 PF10459 Peptidase S46 KFE98_11790 PF00226 DnaJ domain KFE98_11790 PF01556 DnaJ C terminal domain KFE98_11790 PF00684 DnaJ central domain KFE98_11805 PF00206 Lyase KFE98_11805 PF08328 Adenylosuccinate lyase C-terminal KFE98_11820 PF03819 MazG nucleotide pyrophosphohydrolase domain KFE98_11840 PF01926 50S ribosome-binding GTPase KFE98_11840 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KFE98_11885 PF00535 Glycosyl transferase family 2 KFE98_11890 PF00994 Probable molybdopterin binding domain KFE98_11890 PF18146 Damage-inducible protein CinA KH domain KFE98_11890 PF02464 Competence-damaged protein KFE98_11895 PF00830 Ribosomal L28 family KFE98_11905 PF00512 His Kinase A (phospho-acceptor) domain KFE98_11905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_11910 PF02926 THUMP domain KFE98_11910 PF01170 Putative RNA methylase family UPF0020 KFE98_11925 PF01809 Putative membrane protein insertion efficiency factor KFE98_11935 PF09190 DALR domain KFE98_11935 PF01406 tRNA synthetases class I (C) catalytic domain KFE98_11940 PF01227 GTP cyclohydrolase I KFE98_11960 PF13673 Acetyltransferase (GNAT) domain KFE98_11975 PF01496 V-type ATPase 116kDa subunit family KFE98_11985 PF01813 ATP synthase subunit D KFE98_11990 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFE98_11990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFE98_11995 PF16886 ATPsynthase alpha/beta subunit N-term extension KFE98_11995 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFE98_11995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFE98_12015 PF02666 Phosphatidylserine decarboxylase KFE98_12030 PF17862 AAA+ lid domain KFE98_12030 PF01434 Peptidase family M41 KFE98_12030 PF00004 ATPase family associated with various cellular activities (AAA) KFE98_12040 PF02237 Biotin protein ligase C terminal domain KFE98_12040 PF03099 Biotin/lipoate A/B protein ligase family KFE98_12040 PF08279 HTH domain KFE98_12050 PF00156 Phosphoribosyl transferase domain KFE98_12055 PF00293 NUDIX domain KFE98_12195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KFE98_12195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KFE98_12200 PF02397 Bacterial sugar transferase KFE98_12210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KFE98_12210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KFE98_12230 PF00459 Inositol monophosphatase family KFE98_12235 PF04055 Radical SAM superfamily KFE98_12235 PF01938 TRAM domain KFE98_12235 PF00919 Uncharacterized protein family UPF0004 KFE98_12245 PF00589 Phage integrase family KFE98_12245 PF02899 Phage integrase, N-terminal SAM-like domain KFE98_12255 PF01220 Dehydroquinase class II KFE98_12260 PF04321 RmlD substrate binding domain KFE98_12265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFE98_12265 PF07497 Rho termination factor, RNA-binding domain KFE98_12275 PF01225 Mur ligase family, catalytic domain KFE98_12275 PF02875 Mur ligase family, glutamate ligase domain KFE98_12275 PF08245 Mur ligase middle domain KFE98_12285 PF00258 Flavodoxin KFE98_12290 PF01245 Ribosomal protein L19 KFE98_12295 PF01746 tRNA (Guanine-1)-methyltransferase KFE98_12310 PF02515 CoA-transferase family III KFE98_12345 PF08274 PhnA Zinc-Ribbon KFE98_12345 PF03831 PhnA domain KFE98_12380 PF02492 CobW/HypB/UreG, nucleotide-binding domain KFE98_12380 PF07683 Cobalamin synthesis protein cobW C-terminal domain KFE98_12400 PF00144 Beta-lactamase KFE98_12410 PF03551 Transcriptional regulator PadR-like family KFE98_12440 PF03976 Polyphosphate kinase 2 (PPK2) KFE98_12445 PF02401 LytB protein KFE98_12450 PF04055 Radical SAM superfamily KFE98_12450 PF18693 TRAM domain KFE98_12450 PF00919 Uncharacterized protein family UPF0004 KFE98_12455 PF10079 Bacillithiol biosynthesis BshC KFE98_12465 PF00117 Glutamine amidotransferase class-I KFE98_12465 PF00958 GMP synthase C terminal domain KFE98_12465 PF02540 NAD synthase KFE98_12470 PF01476 LysM domain KFE98_12470 PF00877 NlpC/P60 family KFE98_12475 PF01218 Coproporphyrinogen III oxidase KFE98_12485 PF01580 FtsK/SpoIIIE family KFE98_12485 PF09397 Ftsk gamma domain KFE98_12485 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KFE98_12485 PF17854 FtsK alpha domain KFE98_12495 PF05746 DALR anticodon binding domain KFE98_12495 PF00750 tRNA synthetases class I (R) KFE98_12500 PF00072 Response regulator receiver domain KFE98_12500 PF01339 CheB methylesterase KFE98_12505 PF02881 SRP54-type protein, helical bundle domain KFE98_12505 PF02978 Signal peptide binding domain KFE98_12505 PF00448 SRP54-type protein, GTPase domain KFE98_12510 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KFE98_12510 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KFE98_12515 PF00691 OmpA family KFE98_12535 PF00884 Sulfatase KFE98_12545 PF01061 ABC-2 type transporter KFE98_12545 PF00005 ABC transporter KFE98_12545 PF00498 FHA domain KFE98_12550 PF01668 SmpB protein KFE98_12560 PF00072 Response regulator receiver domain KFE98_12560 PF04397 LytTr DNA-binding domain KFE98_12565 PF07694 5TMR of 5TMR-LYT KFE98_12565 PF13492 GAF domain KFE98_12565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_12565 PF06580 Histidine kinase KFE98_12580 PF01039 Carboxyl transferase domain KFE98_12600 PF10502 Signal peptidase, peptidase S26 KFE98_12605 PF05173 Dihydrodipicolinate reductase, C-terminus KFE98_12605 PF01113 Dihydrodipicolinate reductase, N-terminus KFE98_12615 PF17762 HTH domain found in ParB protein KFE98_12615 PF02195 ParB-like nuclease domain KFE98_12620 PF13614 AAA domain KFE98_12625 PF02525 Flavodoxin-like fold KFE98_12685 PF07885 Ion channel KFE98_12685 PF02254 TrkA-N domain KFE98_12695 PF13369 Transglutaminase-like superfamily KFE98_12705 PF01048 Phosphorylase superfamily KFE98_12715 PF02618 YceG-like family KFE98_12720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KFE98_12720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KFE98_12720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KFE98_12720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KFE98_12725 PF05175 Methyltransferase small domain KFE98_12730 PF01782 RimM N-terminal domain KFE98_12735 PF00886 Ribosomal protein S16 KFE98_12740 PF04134 Protein of unknown function, DUF393 KFE98_12750 PF00005 ABC transporter KFE98_12750 PF00664 ABC transporter transmembrane region KFE98_12755 PF01416 tRNA pseudouridine synthase KFE98_12780 PF01136 Peptidase family U32 KFE98_12790 PF00691 OmpA family KFE98_12790 PF05736 OprF membrane domain KFE98_12810 PF02132 RecR protein KFE98_12810 PF13662 Toprim domain KFE98_12815 PF00474 Sodium:solute symporter family KFE98_12840 PF00255 Glutathione peroxidase KFE98_12845 PF01432 Peptidase family M3 KFE98_12870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KFE98_12870 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFE98_12935 PF02634 FdhD/NarQ family KFE98_12965 PF01966 HD domain KFE98_12965 PF00013 KH domain KFE98_12965 PF12072 Domain of unknown function (DUF3552) KFE98_12970 PF01370 NAD dependent epimerase/dehydratase family KFE98_12980 PF02913 FAD linked oxidases, C-terminal domain KFE98_12980 PF01565 FAD binding domain KFE98_12995 PF05736 OprF membrane domain KFE98_12995 PF00691 OmpA family KFE98_13005 PF00486 Transcriptional regulatory protein, C terminal KFE98_13005 PF00072 Response regulator receiver domain KFE98_13020 PF00535 Glycosyl transferase family 2 KFE98_13035 PF00072 Response regulator receiver domain KFE98_13035 PF04397 LytTr DNA-binding domain KFE98_13040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_13040 PF00512 His Kinase A (phospho-acceptor) domain KFE98_13040 PF09308 LuxQ, periplasmic KFE98_13040 PF00072 Response regulator receiver domain KFE98_13050 PF01642 Methylmalonyl-CoA mutase KFE98_13050 PF02310 B12 binding domain KFE98_13055 PF07690 Major Facilitator Superfamily KFE98_13070 PF06580 Histidine kinase KFE98_13070 PF07694 5TMR of 5TMR-LYT KFE98_13070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_13085 PF00005 ABC transporter KFE98_13090 PF00005 ABC transporter KFE98_13090 PF12704 MacB-like periplasmic core domain KFE98_13090 PF02687 FtsX-like permease family KFE98_13100 PF02687 FtsX-like permease family KFE98_13100 PF00005 ABC transporter KFE98_13100 PF12704 MacB-like periplasmic core domain KFE98_13105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFE98_13125 PF00271 Helicase conserved C-terminal domain KFE98_13125 PF00270 DEAD/DEAH box helicase KFE98_13125 PF00570 HRDC domain KFE98_13125 PF16124 RecQ zinc-binding KFE98_13125 PF09382 RQC domain KFE98_13140 PF00155 Aminotransferase class I and II KFE98_13175 PF08241 Methyltransferase domain KFE98_13180 PF00072 Response regulator receiver domain KFE98_13180 PF00196 Bacterial regulatory proteins, luxR family KFE98_13260 PF01619 Proline dehydrogenase KFE98_13265 PF01433 Peptidase family M1 domain KFE98_13285 PF00282 Pyridoxal-dependent decarboxylase conserved domain KFE98_13300 PF01790 Prolipoprotein diacylglyceryl transferase KFE98_13380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KFE98_13380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KFE98_13380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KFE98_13380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KFE98_13385 PF08264 Anticodon-binding domain of tRNA KFE98_13385 PF00133 tRNA synthetases class I (I, L, M and V) KFE98_13385 PF10458 Valyl tRNA synthetase tRNA binding arm KFE98_13400 PF00440 Bacterial regulatory proteins, tetR family KFE98_13425 PF00155 Aminotransferase class I and II KFE98_13435 PF00471 Ribosomal protein L33 KFE98_13445 PF00448 SRP54-type protein, GTPase domain KFE98_13445 PF02881 SRP54-type protein, helical bundle domain KFE98_13450 PF02224 Cytidylate kinase KFE98_13470 PF01264 Chorismate synthase KFE98_13475 PF00375 Sodium:dicarboxylate symporter family KFE98_13490 PF00223 Photosystem I psaA/psaB protein KFE98_13490 PF00691 OmpA family KFE98_13500 PF02779 Transketolase, pyrimidine binding domain KFE98_13500 PF02780 Transketolase, C-terminal domain KFE98_13505 PF00092 von Willebrand factor type A domain KFE98_13510 PF00456 Transketolase, thiamine diphosphate binding domain KFE98_13510 PF02780 Transketolase, C-terminal domain KFE98_13510 PF02779 Transketolase, pyrimidine binding domain KFE98_13520 PF00072 Response regulator receiver domain KFE98_13520 PF04397 LytTr DNA-binding domain KFE98_13540 PF06071 Protein of unknown function (DUF933) KFE98_13540 PF01926 50S ribosome-binding GTPase KFE98_13545 PF00204 DNA gyrase B KFE98_13545 PF00986 DNA gyrase B subunit, carboxyl terminus KFE98_13545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_13545 PF01751 Toprim domain KFE98_13565 PF00521 DNA gyrase/topoisomerase IV, subunit A KFE98_13585 PF00155 Aminotransferase class I and II KFE98_13600 PF04127 DNA / pantothenate metabolism flavoprotein KFE98_13600 PF02441 Flavoprotein KFE98_13615 PF02463 RecF/RecN/SMC N terminal domain KFE98_13635 PF08442 ATP-grasp domain KFE98_13635 PF00549 CoA-ligase KFE98_13640 PF11973 NQRA C-terminal domain KFE98_13640 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) KFE98_13645 PF03116 NQR2, RnfD, RnfE family KFE98_13650 PF04205 FMN-binding domain KFE98_13655 PF02508 Rnf-Nqr subunit, membrane protein KFE98_13660 PF02508 Rnf-Nqr subunit, membrane protein KFE98_13665 PF00970 Oxidoreductase FAD-binding domain KFE98_13665 PF00111 2Fe-2S iron-sulfur cluster binding domain KFE98_13665 PF00175 Oxidoreductase NAD-binding domain KFE98_13670 PF02424 ApbE family KFE98_13685 PF01649 Ribosomal protein S20 KFE98_13690 PF04002 RadC-like JAB domain KFE98_13710 PF02699 Preprotein translocase subunit KFE98_13720 PF01121 Dephospho-CoA kinase KFE98_13725 PF03853 YjeF-related protein N-terminus KFE98_13725 PF01256 Carbohydrate kinase KFE98_13735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFE98_13735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KFE98_13740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFE98_13740 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KFE98_13745 PF00226 DnaJ domain KFE98_13745 PF01556 DnaJ C terminal domain KFE98_13745 PF00684 DnaJ central domain KFE98_13765 PF06968 Biotin and Thiamin Synthesis associated domain KFE98_13765 PF04055 Radical SAM superfamily KFE98_13770 PF00109 Beta-ketoacyl synthase, N-terminal domain KFE98_13770 PF02801 Beta-ketoacyl synthase, C-terminal domain KFE98_13775 PF00202 Aminotransferase class-III KFE98_13785 PF00155 Aminotransferase class I and II KFE98_13790 PF00155 Aminotransferase class I and II KFE98_13795 PF00183 Hsp90 protein KFE98_13795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_13800 PF03575 Peptidase family S51 KFE98_13830 PF00293 NUDIX domain KFE98_13835 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KFE98_13835 PF01266 FAD dependent oxidoreductase KFE98_13840 PF04336 Acyl carrier protein phosphodiesterase KFE98_13855 PF00005 ABC transporter KFE98_13875 PF01119 DNA mismatch repair protein, C-terminal domain KFE98_13875 PF08676 MutL C terminal dimerisation domain KFE98_13895 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KFE98_13895 PF01243 Pyridoxamine 5'-phosphate oxidase KFE98_13915 PF04397 LytTr DNA-binding domain KFE98_13915 PF00072 Response regulator receiver domain KFE98_13920 PF07568 Histidine kinase KFE98_13920 PF12282 Signal transduction histidine kinase KFE98_13920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_13940 PF00216 Bacterial DNA-binding protein KFE98_13950 PF02911 Formyl transferase, C-terminal domain KFE98_13950 PF00551 Formyl transferase KFE98_13955 PF00072 Response regulator receiver domain KFE98_13955 PF07494 Two component regulator propeller KFE98_13955 PF12833 Helix-turn-helix domain KFE98_13955 PF00512 His Kinase A (phospho-acceptor) domain KFE98_13955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_13955 PF07495 Y_Y_Y domain KFE98_13960 PF01554 MatE KFE98_13975 PF00691 OmpA family KFE98_13975 PF05736 OprF membrane domain KFE98_14035 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFE98_14035 PF14759 Reductase C-terminal KFE98_14055 PF00535 Glycosyl transferase family 2 KFE98_14080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KFE98_14080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KFE98_14085 PF04539 Sigma-70 region 3 KFE98_14085 PF04542 Sigma-70 region 2 KFE98_14085 PF00140 Sigma-70 factor, region 1.2 KFE98_14085 PF03979 Sigma-70 factor, region 1.1 KFE98_14085 PF04545 Sigma-70, region 4 KFE98_14090 PF13180 PDZ domain KFE98_14090 PF17820 PDZ domain KFE98_14095 PF01678 Diaminopimelate epimerase KFE98_14110 PF02768 DNA polymerase III beta subunit, C-terminal domain KFE98_14110 PF02767 DNA polymerase III beta subunit, central domain KFE98_14110 PF00712 DNA polymerase III beta subunit, N-terminal domain KFE98_14130 PF00696 Amino acid kinase family KFE98_14130 PF01842 ACT domain KFE98_14135 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KFE98_14135 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KFE98_14140 PF01209 ubiE/COQ5 methyltransferase family KFE98_14150 PF00034 Cytochrome c KFE98_14150 PF03150 Di-haem cytochrome c peroxidase KFE98_14185 PF06969 HemN C-terminal domain KFE98_14185 PF04055 Radical SAM superfamily KFE98_14200 PF13746 4Fe-4S dicluster domain KFE98_14200 PF12801 4Fe-4S binding domain KFE98_14200 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KFE98_14205 PF00034 Cytochrome c KFE98_14205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KFE98_14205 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KFE98_14220 PF03597 Cytochrome oxidase maturation protein cbb3-type KFE98_14225 PF00403 Heavy-metal-associated domain KFE98_14235 PF04116 Fatty acid hydroxylase superfamily KFE98_14245 PF01593 Flavin containing amine oxidoreductase KFE98_14260 PF03150 Di-haem cytochrome c peroxidase KFE98_14265 PF03150 Di-haem cytochrome c peroxidase KFE98_14270 PF01242 6-pyruvoyl tetrahydropterin synthase KFE98_14275 PF00293 NUDIX domain KFE98_14285 PF01593 Flavin containing amine oxidoreductase KFE98_14290 PF08281 Sigma-70, region 4 KFE98_14290 PF04542 Sigma-70 region 2 KFE98_14320 PF00942 Cellulose binding domain KFE98_14320 PF03442 Carbohydrate binding domain X2 KFE98_14325 PF07885 Ion channel KFE98_14325 PF17655 Inward rectifier potassium channel C-terminal domain KFE98_14330 PF00072 Response regulator receiver domain KFE98_14330 PF00486 Transcriptional regulatory protein, C terminal KFE98_14335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_14335 PF00512 His Kinase A (phospho-acceptor) domain KFE98_14355 PF10459 Peptidase S46 KFE98_14360 PF12706 Beta-lactamase superfamily domain KFE98_14365 PF03466 LysR substrate binding domain KFE98_14365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFE98_14375 PF00535 Glycosyl transferase family 2 KFE98_14385 PF01329 Pterin 4 alpha carbinolamine dehydratase KFE98_14435 PF03061 Thioesterase superfamily KFE98_14445 PF02096 60Kd inner membrane protein KFE98_14445 PF14849 YidC periplasmic domain KFE98_14450 PF02096 60Kd inner membrane protein KFE98_14450 PF14849 YidC periplasmic domain KFE98_14455 PF06418 CTP synthase N-terminus KFE98_14455 PF00117 Glutamine amidotransferase class-I KFE98_14460 PF04397 LytTr DNA-binding domain KFE98_14460 PF00072 Response regulator receiver domain KFE98_14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_14465 PF06580 Histidine kinase KFE98_14505 PF01464 Transglycosylase SLT domain KFE98_14505 PF10145 Phage-related minor tail protein KFE98_14505 PF01551 Peptidase family M23 KFE98_14515 PF00082 Subtilase family KFE98_14520 PF00034 Cytochrome c KFE98_14520 PF03150 Di-haem cytochrome c peroxidase KFE98_14525 PF08453 Peptidase family M9 N-terminal KFE98_14525 PF01752 Collagenase KFE98_14525 PF18496 Collagenase G catalytic helper subdomain KFE98_14560 PF12833 Helix-turn-helix domain KFE98_14560 PF00072 Response regulator receiver domain KFE98_14575 PF04264 YceI-like domain KFE98_14610 PF00583 Acetyltransferase (GNAT) family KFE98_14620 PF04371 Porphyromonas-type peptidyl-arginine deiminase KFE98_14660 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KFE98_14670 PF01638 HxlR-like helix-turn-helix KFE98_14675 PF09844 Uncharacterized conserved protein (COG2071) KFE98_14690 PF01965 DJ-1/PfpI family KFE98_14730 PF12833 Helix-turn-helix domain KFE98_14730 PF06719 AraC-type transcriptional regulator N-terminus KFE98_14745 PF13460 NAD(P)H-binding KFE98_14750 PF00106 short chain dehydrogenase KFE98_14765 PF03781 Sulfatase-modifying factor enzyme 1 KFE98_14785 PF13673 Acetyltransferase (GNAT) domain KFE98_14815 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFE98_14830 PF00144 Beta-lactamase KFE98_14865 PF01590 GAF domain KFE98_14865 PF00158 Sigma-54 interaction domain KFE98_14905 PF00664 ABC transporter transmembrane region KFE98_14905 PF00005 ABC transporter KFE98_14910 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KFE98_14910 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KFE98_14915 PF01029 NusB family KFE98_14935 PF01638 HxlR-like helix-turn-helix KFE98_14975 PF00583 Acetyltransferase (GNAT) family KFE98_14995 PF00085 Thioredoxin KFE98_15025 PF02872 5'-nucleotidase, C-terminal domain KFE98_15025 PF00149 Calcineurin-like phosphoesterase KFE98_15105 PF01202 Shikimate kinase KFE98_15110 PF00156 Phosphoribosyl transferase domain KFE98_15120 PF01938 TRAM domain KFE98_15120 PF05958 tRNA (Uracil-5-)-methyltransferase KFE98_15125 PF00202 Aminotransferase class-III KFE98_15145 PF01557 Fumarylacetoacetate (FAA) hydrolase family KFE98_15155 PF05736 OprF membrane domain KFE98_15155 PF00691 OmpA family KFE98_15160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KFE98_15160 PF00364 Biotin-requiring enzyme KFE98_15160 PF02817 e3 binding domain KFE98_15180 PF00582 Universal stress protein family KFE98_15190 PF00535 Glycosyl transferase family 2 KFE98_15195 PF01048 Phosphorylase superfamily KFE98_15260 PF00850 Histone deacetylase domain KFE98_15280 PF00578 AhpC/TSA family KFE98_15285 PF01467 Cytidylyltransferase-like KFE98_15310 PF07733 Bacterial DNA polymerase III alpha NTPase domain KFE98_15310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KFE98_15310 PF14579 Helix-hairpin-helix motif KFE98_15310 PF02811 PHP domain KFE98_15310 PF01336 OB-fold nucleic acid binding domain KFE98_15335 PF00795 Carbon-nitrogen hydrolase KFE98_15365 PF04055 Radical SAM superfamily KFE98_15390 PF11838 ERAP1-like C-terminal domain KFE98_15390 PF01433 Peptidase family M1 domain KFE98_15395 PF01979 Amidohydrolase family KFE98_15400 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KFE98_15410 PF07837 Formiminotransferase domain, N-terminal subdomain KFE98_15410 PF02971 Formiminotransferase domain KFE98_15430 PF00753 Metallo-beta-lactamase superfamily KFE98_15430 PF12706 Beta-lactamase superfamily domain KFE98_15440 PF01740 STAS domain KFE98_15445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KFE98_15445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KFE98_15450 PF00156 Phosphoribosyl transferase domain KFE98_15455 PF00575 S1 RNA binding domain KFE98_15470 PF00970 Oxidoreductase FAD-binding domain KFE98_15470 PF00175 Oxidoreductase NAD-binding domain KFE98_15470 PF00111 2Fe-2S iron-sulfur cluster binding domain KFE98_15475 PF05138 Phenylacetic acid catabolic protein KFE98_15480 PF06243 Phenylacetic acid degradation B KFE98_15485 PF05138 Phenylacetic acid catabolic protein KFE98_15490 PF01883 Iron-sulfur cluster assembly protein KFE98_15500 PF00378 Enoyl-CoA hydratase/isomerase KFE98_15505 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KFE98_15505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KFE98_15505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KFE98_15515 PF11838 ERAP1-like C-terminal domain KFE98_15515 PF01433 Peptidase family M1 domain KFE98_15520 PF00588 SpoU rRNA Methylase family KFE98_15545 PF02803 Thiolase, C-terminal domain KFE98_15545 PF00108 Thiolase, N-terminal domain KFE98_15570 PF00578 AhpC/TSA family KFE98_15615 PF04358 DsrC like protein KFE98_15620 PF18267 Rubredoxin NAD+ reductase C-terminal domain KFE98_15620 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFE98_15645 PF00106 short chain dehydrogenase KFE98_15650 PF12833 Helix-turn-helix domain KFE98_15650 PF02311 AraC-like ligand binding domain KFE98_15655 PF00106 short chain dehydrogenase KFE98_15660 PF00106 short chain dehydrogenase KFE98_15665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_15665 PF00512 His Kinase A (phospho-acceptor) domain KFE98_15665 PF00072 Response regulator receiver domain KFE98_15665 PF08448 PAS fold KFE98_15665 PF13426 PAS domain KFE98_15680 PF00581 Rhodanese-like domain KFE98_15680 PF00753 Metallo-beta-lactamase superfamily KFE98_15685 PF00581 Rhodanese-like domain KFE98_15695 PF02321 Outer membrane efflux protein KFE98_15700 PF00873 AcrB/AcrD/AcrF family KFE98_15705 PF00873 AcrB/AcrD/AcrF family KFE98_15710 PF00529 HlyD membrane-fusion protein of T1SS KFE98_15710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFE98_15715 PF13533 Biotin-lipoyl like KFE98_15735 PF00072 Response regulator receiver domain KFE98_15745 PF00924 Mechanosensitive ion channel KFE98_15755 PF08032 RNA 2'-O ribose methyltransferase substrate binding KFE98_15755 PF00588 SpoU rRNA Methylase family KFE98_15760 PF01975 Survival protein SurE KFE98_15770 PF02684 Lipid-A-disaccharide synthetase KFE98_15775 PF04122 Putative cell wall binding repeat 2 KFE98_15775 PF08486 Stage II sporulation protein KFE98_15780 PF00753 Metallo-beta-lactamase superfamily KFE98_15780 PF03772 Competence protein KFE98_15780 PF13567 Domain of unknown function (DUF4131) KFE98_15785 PF01368 DHH family KFE98_15785 PF02272 DHHA1 domain KFE98_15785 PF01743 Poly A polymerase head domain KFE98_15785 PF00571 CBS domain KFE98_15790 PF01300 Telomere recombination KFE98_15800 PF14602 Hexapeptide repeat of succinyl-transferase KFE98_15800 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KFE98_15805 PF03652 Holliday junction resolvase KFE98_15810 PF01327 Polypeptide deformylase KFE98_15825 PF00708 Acylphosphatase KFE98_15830 PF01894 Uncharacterised protein family UPF0047 KFE98_15840 PF02311 AraC-like ligand binding domain KFE98_15840 PF12833 Helix-turn-helix domain KFE98_15860 PF16177 Acetyl-coenzyme A synthetase N-terminus KFE98_15860 PF00501 AMP-binding enzyme KFE98_15860 PF13193 AMP-binding enzyme C-terminal domain KFE98_15875 PF08240 Alcohol dehydrogenase GroES-like domain KFE98_15875 PF00107 Zinc-binding dehydrogenase KFE98_15880 PF01336 OB-fold nucleic acid binding domain KFE98_15880 PF00929 Exonuclease KFE98_15880 PF07733 Bacterial DNA polymerase III alpha NTPase domain KFE98_15880 PF14579 Helix-hairpin-helix motif KFE98_15880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KFE98_15880 PF02811 PHP domain KFE98_15880 PF11490 DNA polymerase III polC-type N-terminus II KFE98_15940 PF13018 Extended Signal Peptide of Type V secretion system KFE98_15940 PF02661 Fic/DOC family KFE98_15940 PF13332 Hemagglutinin repeat KFE98_15940 PF05860 haemagglutination activity domain KFE98_15940 PF03543 Yersinia/Haemophilus virulence surface antigen KFE98_15945 PF01416 tRNA pseudouridine synthase KFE98_15955 PF00034 Cytochrome c KFE98_15955 PF03150 Di-haem cytochrome c peroxidase KFE98_16015 PF07730 Histidine kinase KFE98_16020 PF00072 Response regulator receiver domain KFE98_16020 PF00196 Bacterial regulatory proteins, luxR family KFE98_16025 PF01734 Patatin-like phospholipase KFE98_16040 PF12848 ABC transporter KFE98_16040 PF00005 ABC transporter KFE98_16145 PF16363 GDP-mannose 4,6 dehydratase KFE98_16190 PF00535 Glycosyl transferase family 2 KFE98_16200 PF00085 Thioredoxin KFE98_16290 PF01914 MarC family integral membrane protein KFE98_16320 PF00106 short chain dehydrogenase KFE98_16360 PF00436 Single-strand binding protein family KFE98_16410 PF00719 Inorganic pyrophosphatase KFE98_16415 PF01259 SAICAR synthetase KFE98_16450 PF01062 Bestrophin, RFP-TM, chloride channel KFE98_16455 PF00583 Acetyltransferase (GNAT) family KFE98_16465 PF01022 Bacterial regulatory protein, arsR family KFE98_16470 PF07853 Protein of unknown function (DUF1648) KFE98_16470 PF13630 SdpI/YhfL protein family KFE98_16485 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KFE98_16550 PF00528 Binding-protein-dependent transport system inner membrane component KFE98_16555 PF08402 TOBE domain KFE98_16555 PF00005 ABC transporter KFE98_16565 PF03459 TOBE domain KFE98_16565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFE98_16575 PF00899 ThiF family KFE98_16580 PF02391 MoaE protein KFE98_16585 PF01967 MoaC family KFE98_16585 PF00994 Probable molybdopterin binding domain KFE98_16595 PF00248 Aldo/keto reductase family KFE98_16600 PF02698 DUF218 domain KFE98_16630 PF01062 Bestrophin, RFP-TM, chloride channel KFE98_16635 PF09308 LuxQ, periplasmic KFE98_16635 PF00512 His Kinase A (phospho-acceptor) domain KFE98_16635 PF00072 Response regulator receiver domain KFE98_16635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_16650 PF00270 DEAD/DEAH box helicase KFE98_16650 PF00271 Helicase conserved C-terminal domain KFE98_16660 PF00149 Calcineurin-like phosphoesterase KFE98_16660 PF10518 TAT (twin-arginine translocation) pathway signal sequence KFE98_16665 PF07495 Y_Y_Y domain KFE98_16665 PF00072 Response regulator receiver domain KFE98_16665 PF07494 Two component regulator propeller KFE98_16665 PF12833 Helix-turn-helix domain KFE98_16665 PF00512 His Kinase A (phospho-acceptor) domain KFE98_16665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_16670 PF00072 Response regulator receiver domain KFE98_16670 PF00196 Bacterial regulatory proteins, luxR family KFE98_16675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KFE98_16695 PF08338 Domain of unknown function (DUF1731) KFE98_16695 PF01370 NAD dependent epimerase/dehydratase family KFE98_16725 PF12706 Beta-lactamase superfamily domain KFE98_16730 PF01062 Bestrophin, RFP-TM, chloride channel KFE98_16735 PF03781 Sulfatase-modifying factor enzyme 1 KFE98_16750 PF00916 Sulfate permease family KFE98_16750 PF01740 STAS domain KFE98_16755 PF09382 RQC domain KFE98_16755 PF16124 RecQ zinc-binding KFE98_16755 PF00570 HRDC domain KFE98_16755 PF00271 Helicase conserved C-terminal domain KFE98_16755 PF00270 DEAD/DEAH box helicase KFE98_16780 PF00313 'Cold-shock' DNA-binding domain KFE98_16805 PF00034 Cytochrome c KFE98_16805 PF03150 Di-haem cytochrome c peroxidase KFE98_16830 PF13089 Polyphosphate kinase N-terminal domain KFE98_16830 PF17941 Polyphosphate kinase C-terminal domain 1 KFE98_16830 PF13090 Polyphosphate kinase C-terminal domain 2 KFE98_16830 PF02503 Polyphosphate kinase middle domain KFE98_16845 PF06580 Histidine kinase KFE98_16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_16845 PF00672 HAMP domain KFE98_16845 PF02743 Cache domain KFE98_16850 PF04397 LytTr DNA-binding domain KFE98_16850 PF00072 Response regulator receiver domain KFE98_16890 PF01420 Type I restriction modification DNA specificity domain KFE98_16895 PF12161 HsdM N-terminal domain KFE98_16895 PF02384 N-6 DNA Methylase KFE98_16910 PF04851 Type III restriction enzyme, res subunit KFE98_16910 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) KFE98_16910 PF00271 Helicase conserved C-terminal domain KFE98_16910 PF08463 EcoEI R protein C-terminal KFE98_17045 PF00072 Response regulator receiver domain KFE98_17045 PF04397 LytTr DNA-binding domain KFE98_17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_17050 PF06580 Histidine kinase KFE98_17050 PF07694 5TMR of 5TMR-LYT KFE98_17065 PF00211 Adenylate and Guanylate cyclase catalytic domain KFE98_17065 PF00072 Response regulator receiver domain KFE98_17075 PF03475 3-alpha domain KFE98_17075 PF03473 MOSC domain KFE98_17120 PF00211 Adenylate and Guanylate cyclase catalytic domain KFE98_17125 PF00144 Beta-lactamase KFE98_17145 PF00144 Beta-lactamase KFE98_17165 PF12161 HsdM N-terminal domain KFE98_17165 PF02384 N-6 DNA Methylase KFE98_17170 PF00271 Helicase conserved C-terminal domain KFE98_17170 PF12137 RNA polymerase recycling family C-terminal KFE98_17170 PF18339 RapA N-terminal Tudor like domain 1 KFE98_17170 PF18337 RapA N-terminal Tudor like domain KFE98_17170 PF00176 SNF2 family N-terminal domain KFE98_17180 PF00270 DEAD/DEAH box helicase KFE98_17180 PF09369 Domain of unknown function (DUF1998) KFE98_17180 PF00271 Helicase conserved C-terminal domain KFE98_17205 PF00196 Bacterial regulatory proteins, luxR family KFE98_17205 PF00072 Response regulator receiver domain KFE98_17210 PF07730 Histidine kinase KFE98_17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_17250 PF06580 Histidine kinase KFE98_17250 PF02743 Cache domain KFE98_17250 PF00672 HAMP domain KFE98_17250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_17255 PF00072 Response regulator receiver domain KFE98_17255 PF04397 LytTr DNA-binding domain KFE98_17260 PF00072 Response regulator receiver domain KFE98_17260 PF00196 Bacterial regulatory proteins, luxR family KFE98_17270 PF00141 Peroxidase KFE98_17275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFE98_17275 PF03466 LysR substrate binding domain KFE98_17280 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family KFE98_17305 PF01546 Peptidase family M20/M25/M40 KFE98_17305 PF07687 Peptidase dimerisation domain KFE98_17330 PF01752 Collagenase KFE98_17330 PF08453 Peptidase family M9 N-terminal KFE98_17340 PF01047 MarR family KFE98_17345 PF00881 Nitroreductase family KFE98_17390 PF01370 NAD dependent epimerase/dehydratase family KFE98_17395 PF08421 Putative zinc binding domain KFE98_17395 PF08484 C-methyltransferase C-terminal domain KFE98_17400 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KFE98_17405 PF16363 GDP-mannose 4,6 dehydratase KFE98_17410 PF00483 Nucleotidyl transferase KFE98_17420 PF01979 Amidohydrolase family KFE98_17455 PF00085 Thioredoxin KFE98_17475 PF04264 YceI-like domain KFE98_17485 PF01053 Cys/Met metabolism PLP-dependent enzyme KFE98_17490 PF00561 alpha/beta hydrolase fold KFE98_17500 PF03447 Homoserine dehydrogenase, NAD binding domain KFE98_17500 PF00742 Homoserine dehydrogenase KFE98_17500 PF00696 Amino acid kinase family KFE98_17500 PF01842 ACT domain KFE98_17500 PF13840 ACT domain KFE98_17505 PF05139 Erythromycin esterase KFE98_17510 PF00144 Beta-lactamase KFE98_17510 PF11954 Domain of unknown function (DUF3471) KFE98_17535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_17535 PF00512 His Kinase A (phospho-acceptor) domain KFE98_17535 PF07689 KaiB domain KFE98_17540 PF04397 LytTr DNA-binding domain KFE98_17540 PF00072 Response regulator receiver domain KFE98_17555 PF00633 Helix-hairpin-helix motif KFE98_17555 PF04002 RadC-like JAB domain KFE98_17560 PF11066 Protein of unknown function (DUF2867) KFE98_17560 PF13460 NAD(P)H-binding KFE98_17600 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KFE98_17615 PF04397 LytTr DNA-binding domain KFE98_17615 PF00072 Response regulator receiver domain KFE98_17620 PF13581 Histidine kinase-like ATPase domain KFE98_17620 PF13426 PAS domain KFE98_17620 PF07568 Histidine kinase KFE98_17655 PF07730 Histidine kinase KFE98_17655 PF17200 Single Cache domain 2 KFE98_17660 PF00196 Bacterial regulatory proteins, luxR family KFE98_17660 PF00072 Response regulator receiver domain KFE98_17680 PF00474 Sodium:solute symporter family KFE98_17700 PF13361 UvrD-like helicase C-terminal domain KFE98_17700 PF00580 UvrD/REP helicase N-terminal domain KFE98_17720 PF00194 Eukaryotic-type carbonic anhydrase KFE98_17725 PF17092 Penicillin-binding protein OB-like domain KFE98_17725 PF00912 Transglycosylase KFE98_17725 PF00905 Penicillin binding protein transpeptidase domain KFE98_17750 PF12826 Helix-hairpin-helix motif KFE98_17750 PF04002 RadC-like JAB domain KFE98_17830 PF03989 DNA gyrase C-terminal domain, beta-propeller KFE98_17830 PF00521 DNA gyrase/topoisomerase IV, subunit A KFE98_17835 PF07724 AAA domain (Cdc48 subfamily) KFE98_17835 PF02861 Clp amino terminal domain, pathogenicity island component KFE98_17835 PF00004 ATPase family associated with various cellular activities (AAA) KFE98_17835 PF10431 C-terminal, D2-small domain, of ClpB protein KFE98_17835 PF17871 AAA lid domain KFE98_17850 PF00196 Bacterial regulatory proteins, luxR family KFE98_17850 PF00072 Response regulator receiver domain KFE98_17855 PF07730 Histidine kinase KFE98_17855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_17855 PF05384 Sensor protein DegS KFE98_17870 PF01368 DHH family KFE98_17870 PF02272 DHHA1 domain KFE98_17875 PF00334 Nucleoside diphosphate kinase KFE98_17885 PF01554 MatE KFE98_17905 PF00581 Rhodanese-like domain KFE98_17910 PF00581 Rhodanese-like domain KFE98_17910 PF00753 Metallo-beta-lactamase superfamily KFE98_17915 PF07690 Major Facilitator Superfamily KFE98_17925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KFE98_17940 PF04143 Sulphur transport KFE98_17960 PF00196 Bacterial regulatory proteins, luxR family KFE98_17960 PF00072 Response regulator receiver domain KFE98_17965 PF00196 Bacterial regulatory proteins, luxR family KFE98_17965 PF00072 Response regulator receiver domain KFE98_17970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_17970 PF07730 Histidine kinase KFE98_18020 PF13350 Tyrosine phosphatase family KFE98_18060 PF02311 AraC-like ligand binding domain KFE98_18060 PF12833 Helix-turn-helix domain KFE98_18070 PF01740 STAS domain KFE98_18070 PF00916 Sulfate permease family KFE98_18080 PF02909 Tetracyclin repressor-like, C-terminal domain KFE98_18080 PF00440 Bacterial regulatory proteins, tetR family KFE98_18120 PF12826 Helix-hairpin-helix motif KFE98_18120 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KFE98_18120 PF00533 BRCA1 C Terminus (BRCT) domain KFE98_18120 PF01653 NAD-dependent DNA ligase adenylation domain KFE98_18120 PF03120 NAD-dependent DNA ligase OB-fold domain KFE98_18125 PF00106 short chain dehydrogenase KFE98_18140 PF03971 Monomeric isocitrate dehydrogenase KFE98_18155 PF01427 D-ala-D-ala dipeptidase KFE98_18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_18160 PF17203 Single cache domain 3 KFE98_18160 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KFE98_18165 PF00583 Acetyltransferase (GNAT) family KFE98_18170 PF01625 Peptide methionine sulfoxide reductase KFE98_18175 PF00682 HMGL-like KFE98_18225 PF13419 Haloacid dehalogenase-like hydrolase KFE98_18225 PF00266 Aminotransferase class-V KFE98_18235 PF10017 Histidine-specific methyltransferase, SAM-dependent KFE98_18245 PF01048 Phosphorylase superfamily KFE98_18280 PF11799 impB/mucB/samB family C-terminal domain KFE98_18280 PF11798 IMS family HHH motif KFE98_18280 PF00817 impB/mucB/samB family KFE98_18285 PF07733 Bacterial DNA polymerase III alpha NTPase domain KFE98_18285 PF01336 OB-fold nucleic acid binding domain KFE98_18285 PF02811 PHP domain KFE98_18285 PF14579 Helix-hairpin-helix motif KFE98_18285 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KFE98_18305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_18305 PF00512 His Kinase A (phospho-acceptor) domain KFE98_18305 PF00989 PAS fold KFE98_18305 PF16736 Single Cache-like KFE98_18310 PF00072 Response regulator receiver domain KFE98_18310 PF00486 Transcriptional regulatory protein, C terminal KFE98_18325 PF00072 Response regulator receiver domain KFE98_18325 PF04397 LytTr DNA-binding domain KFE98_18330 PF07694 5TMR of 5TMR-LYT KFE98_18330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_18330 PF06580 Histidine kinase KFE98_18340 PF00196 Bacterial regulatory proteins, luxR family KFE98_18340 PF00072 Response regulator receiver domain KFE98_18360 PF00593 TonB dependent receptor KFE98_18360 PF07715 TonB-dependent Receptor Plug Domain KFE98_18375 PF03150 Di-haem cytochrome c peroxidase KFE98_18375 PF00034 Cytochrome c KFE98_18385 PF03992 Antibiotic biosynthesis monooxygenase KFE98_18390 PF00155 Aminotransferase class I and II KFE98_18410 PF00472 RF-1 domain KFE98_18415 PF01139 tRNA-splicing ligase RtcB KFE98_18435 PF00873 AcrB/AcrD/AcrF family KFE98_18445 PF00210 Ferritin-like domain KFE98_18490 PF13302 Acetyltransferase (GNAT) domain KFE98_18495 PF00271 Helicase conserved C-terminal domain KFE98_18495 PF00270 DEAD/DEAH box helicase KFE98_18550 PF01554 MatE KFE98_18565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KFE98_18580 PF12146 Serine aminopeptidase, S33 KFE98_18610 PF00271 Helicase conserved C-terminal domain KFE98_18610 PF04851 Type III restriction enzyme, res subunit KFE98_18645 PF01709 Transcriptional regulator KFE98_18675 PF04542 Sigma-70 region 2 KFE98_18675 PF04539 Sigma-70 region 3 KFE98_18675 PF04545 Sigma-70, region 4 KFE98_18690 PF00005 ABC transporter KFE98_18690 PF09383 NIL domain KFE98_18695 PF01555 DNA methylase KFE98_18695 PF18755 Restriction Enzyme Adenine Methylase Associated KFE98_18710 PF00691 OmpA family KFE98_18710 PF05736 OprF membrane domain KFE98_18715 PF00488 MutS domain V KFE98_18715 PF01624 MutS domain I KFE98_18715 PF05188 MutS domain II KFE98_18715 PF05192 MutS domain III KFE98_18715 PF05190 MutS family domain IV KFE98_18725 PF08494 DEAD/H associated KFE98_18725 PF00270 DEAD/DEAH box helicase KFE98_18725 PF00271 Helicase conserved C-terminal domain KFE98_18735 PF13492 GAF domain KFE98_18735 PF07694 5TMR of 5TMR-LYT KFE98_18735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_18735 PF06580 Histidine kinase KFE98_18740 PF04397 LytTr DNA-binding domain KFE98_18740 PF00072 Response regulator receiver domain KFE98_18765 PF00300 Histidine phosphatase superfamily (branch 1) KFE98_18770 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KFE98_18770 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KFE98_18780 PF00588 SpoU rRNA Methylase family KFE98_18785 PF01507 Phosphoadenosine phosphosulfate reductase family KFE98_18790 PF02082 Transcriptional regulator KFE98_18795 PF01180 Dihydroorotate dehydrogenase KFE98_18810 PF00925 GTP cyclohydrolase II KFE98_18810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KFE98_18820 PF00814 Glycoprotease family KFE98_18830 PF01641 SelR domain KFE98_18860 PF00999 Sodium/hydrogen exchanger family KFE98_18865 PF07687 Peptidase dimerisation domain KFE98_18865 PF01546 Peptidase family M20/M25/M40 KFE98_18870 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KFE98_18875 PF02622 Uncharacterized ACR, COG1678 KFE98_18880 PF01063 Amino-transferase class IV KFE98_18885 PF08645 Polynucleotide kinase 3 phosphatase KFE98_18895 PF00202 Aminotransferase class-III KFE98_18900 PF05552 Conserved TM helix KFE98_18900 PF00924 Mechanosensitive ion channel KFE98_18905 PF03061 Thioesterase superfamily KFE98_18910 PF02535 ZIP Zinc transporter KFE98_18940 PF00403 Heavy-metal-associated domain KFE98_18960 PF00440 Bacterial regulatory proteins, tetR family KFE98_18975 PF13492 GAF domain KFE98_18975 PF07694 5TMR of 5TMR-LYT KFE98_18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_18975 PF06580 Histidine kinase KFE98_18980 PF04397 LytTr DNA-binding domain KFE98_18980 PF00072 Response regulator receiver domain KFE98_18990 PF03144 Elongation factor Tu domain 2 KFE98_18990 PF16658 Class II release factor RF3, C-terminal domain KFE98_18990 PF00009 Elongation factor Tu GTP binding domain KFE98_19005 PF03099 Biotin/lipoate A/B protein ligase family KFE98_19005 PF12706 Beta-lactamase superfamily domain KFE98_19020 PF03062 MBOAT, membrane-bound O-acyltransferase family KFE98_19030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KFE98_19030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KFE98_19030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KFE98_19030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KFE98_19035 PF13847 Methyltransferase domain KFE98_19045 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) KFE98_19060 PF08501 Shikimate dehydrogenase substrate binding domain KFE98_19065 PF11838 ERAP1-like C-terminal domain KFE98_19065 PF01433 Peptidase family M1 domain KFE98_19070 PF00701 Dihydrodipicolinate synthetase family KFE98_19080 PF05175 Methyltransferase small domain KFE98_19080 PF17827 PrmC N-terminal domain KFE98_19085 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFE98_19100 PF07698 7TM receptor with intracellular HD hydrolase KFE98_19100 PF07697 7TM-HD extracellular KFE98_19100 PF01966 HD domain KFE98_19120 PF00226 DnaJ domain KFE98_19120 PF01556 DnaJ C terminal domain KFE98_19125 PF00226 DnaJ domain KFE98_19125 PF01556 DnaJ C terminal domain KFE98_19155 PF00437 Type II/IV secretion system protein KFE98_19165 PF07963 Prokaryotic N-terminal methylation motif KFE98_19165 PF14245 Type IV pilin PilA KFE98_19215 PF02463 RecF/RecN/SMC N terminal domain KFE98_19225 PF00885 6,7-dimethyl-8-ribityllumazine synthase KFE98_19235 PF07726 ATPase family associated with various cellular activities (AAA) KFE98_19235 PF17863 AAA lid domain KFE98_19240 PF01882 Protein of unknown function DUF58 KFE98_19255 PF13519 von Willebrand factor type A domain KFE98_19275 PF01063 Amino-transferase class IV KFE98_19280 PF10576 Iron-sulfur binding domain of endonuclease III KFE98_19280 PF00633 Helix-hairpin-helix motif KFE98_19280 PF00730 HhH-GPD superfamily base excision DNA repair protein KFE98_19290 PF04542 Sigma-70 region 2 KFE98_19290 PF08281 Sigma-70, region 4 KFE98_19295 PF17755 UvrA DNA-binding domain KFE98_19295 PF17760 UvrA interaction domain KFE98_19340 PF01979 Amidohydrolase family KFE98_19345 PF00817 impB/mucB/samB family KFE98_19345 PF11799 impB/mucB/samB family C-terminal domain KFE98_19370 PF02780 Transketolase, C-terminal domain KFE98_19370 PF02779 Transketolase, pyrimidine binding domain KFE98_19420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFE98_19420 PF03466 LysR substrate binding domain KFE98_19430 PF08029 HisG, C-terminal domain KFE98_19430 PF01634 ATP phosphoribosyltransferase KFE98_19440 PF00155 Aminotransferase class I and II KFE98_19445 PF00475 Imidazoleglycerol-phosphate dehydratase KFE98_19450 PF00117 Glutamine amidotransferase class-I KFE98_19455 PF00977 Histidine biosynthesis protein KFE98_19460 PF00977 Histidine biosynthesis protein KFE98_19465 PF01502 Phosphoribosyl-AMP cyclohydrolase KFE98_19465 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KFE98_19470 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KFE98_19480 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family KFE98_19490 PF01661 Macro domain KFE98_19505 PF01467 Cytidylyltransferase-like KFE98_19505 PF00293 NUDIX domain KFE98_19525 PF10415 Fumarase C C-terminus KFE98_19525 PF00206 Lyase KFE98_19645 PF03400 IS1 transposase KFE98_19685 PF00482 Type II secretion system (T2SS), protein F KFE98_19710 PF00245 Alkaline phosphatase KFE98_19765 PF00196 Bacterial regulatory proteins, luxR family KFE98_19765 PF00072 Response regulator receiver domain KFE98_19800 PF02660 Glycerol-3-phosphate acyltransferase KFE98_19815 PF00121 Triosephosphate isomerase KFE98_19825 PF13545 Crp-like helix-turn-helix domain KFE98_19825 PF00027 Cyclic nucleotide-binding domain KFE98_19840 PF01575 MaoC like domain KFE98_19840 PF00171 Aldehyde dehydrogenase family KFE98_19850 PF00378 Enoyl-CoA hydratase/isomerase KFE98_19855 PF01451 Low molecular weight phosphotyrosine protein phosphatase KFE98_19870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFE98_19870 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KFE98_19880 PF13302 Acetyltransferase (GNAT) domain KFE98_19930 PF00875 DNA photolyase KFE98_19930 PF03441 FAD binding domain of DNA photolyase KFE98_19935 PF07690 Major Facilitator Superfamily KFE98_19945 PF02567 Phenazine biosynthesis-like protein KFE98_19955 PF03167 Uracil DNA glycosylase superfamily KFE98_19970 PF12867 DinB superfamily KFE98_19980 PF00436 Single-strand binding protein family KFE98_19985 PF01590 GAF domain KFE98_19985 PF00360 Phytochrome region KFE98_19985 PF08446 PAS fold KFE98_19985 PF00512 His Kinase A (phospho-acceptor) domain KFE98_19985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_20000 PF07724 AAA domain (Cdc48 subfamily) KFE98_20000 PF10431 C-terminal, D2-small domain, of ClpB protein KFE98_20000 PF06689 ClpX C4-type zinc finger KFE98_20080 PF00196 Bacterial regulatory proteins, luxR family KFE98_20080 PF00072 Response regulator receiver domain KFE98_20110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFE98_20110 PF00205 Thiamine pyrophosphate enzyme, central domain KFE98_20110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFE98_20120 PF00535 Glycosyl transferase family 2 KFE98_20180 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KFE98_20185 PF00675 Insulinase (Peptidase family M16) KFE98_20185 PF05193 Peptidase M16 inactive domain KFE98_20215 PF10431 C-terminal, D2-small domain, of ClpB protein KFE98_20215 PF02861 Clp amino terminal domain, pathogenicity island component KFE98_20215 PF17871 AAA lid domain KFE98_20215 PF07724 AAA domain (Cdc48 subfamily) KFE98_20215 PF00004 ATPase family associated with various cellular activities (AAA) KFE98_20255 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KFE98_20280 PF12146 Serine aminopeptidase, S33 KFE98_20320 PF04397 LytTr DNA-binding domain KFE98_20320 PF00072 Response regulator receiver domain KFE98_20325 PF07694 5TMR of 5TMR-LYT KFE98_20325 PF06580 Histidine kinase KFE98_20330 PF04397 LytTr DNA-binding domain KFE98_20330 PF00072 Response regulator receiver domain KFE98_20360 PF00593 TonB dependent receptor KFE98_20360 PF07715 TonB-dependent Receptor Plug Domain KFE98_20405 PF00108 Thiolase, N-terminal domain KFE98_20405 PF02803 Thiolase, C-terminal domain KFE98_20410 PF00849 RNA pseudouridylate synthase KFE98_20445 PF00144 Beta-lactamase KFE98_20505 PF00672 HAMP domain KFE98_20505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_20505 PF00512 His Kinase A (phospho-acceptor) domain KFE98_20505 PF00989 PAS fold KFE98_20530 PF03167 Uracil DNA glycosylase superfamily KFE98_20535 PF00005 ABC transporter KFE98_20535 PF08402 TOBE domain KFE98_20540 PF03275 UDP-galactopyranose mutase KFE98_20625 PF00809 Pterin binding enzyme KFE98_20630 PF02457 DisA bacterial checkpoint controller nucleotide-binding KFE98_20635 PF07715 TonB-dependent Receptor Plug Domain KFE98_20635 PF00593 TonB dependent receptor KFE98_20640 PF01906 Putative heavy-metal-binding KFE98_20645 PF00595 PDZ domain KFE98_20645 PF03572 Peptidase family S41 KFE98_20660 PF00491 Arginase family KFE98_20695 PF00561 alpha/beta hydrolase fold KFE98_20700 PF03150 Di-haem cytochrome c peroxidase KFE98_20700 PF00034 Cytochrome c KFE98_20715 PF08713 DNA alkylation repair enzyme KFE98_20725 PF00082 Subtilase family KFE98_20730 PF01380 SIS domain KFE98_20735 PF00534 Glycosyl transferases group 1 KFE98_20760 PF01494 FAD binding domain KFE98_20770 PF03033 Glycosyltransferase family 28 N-terminal domain KFE98_20770 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KFE98_20790 PF07694 5TMR of 5TMR-LYT KFE98_20790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_20790 PF06580 Histidine kinase KFE98_20790 PF13492 GAF domain KFE98_20795 PF04397 LytTr DNA-binding domain KFE98_20795 PF00072 Response regulator receiver domain KFE98_20815 PF00884 Sulfatase KFE98_20830 PF12823 Domain of unknown function (DUF3817) KFE98_20835 PF05175 Methyltransferase small domain KFE98_20850 PF13472 GDSL-like Lipase/Acylhydrolase family KFE98_20855 PF00005 ABC transporter KFE98_20860 PF02687 FtsX-like permease family KFE98_20860 PF12704 MacB-like periplasmic core domain KFE98_20860 PF00005 ABC transporter KFE98_20865 PF03781 Sulfatase-modifying factor enzyme 1 KFE98_20930 PF00873 AcrB/AcrD/AcrF family KFE98_20935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFE98_20955 PF00384 Molybdopterin oxidoreductase KFE98_20955 PF01568 Molydopterin dinucleotide binding domain KFE98_20970 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFE98_20975 PF00111 2Fe-2S iron-sulfur cluster binding domain KFE98_20980 PF00258 Flavodoxin KFE98_20985 PF12146 Serine aminopeptidase, S33 KFE98_21000 PF12833 Helix-turn-helix domain KFE98_21000 PF17853 GGDEF-like domain KFE98_21005 PF00109 Beta-ketoacyl synthase, N-terminal domain KFE98_21005 PF16197 Ketoacyl-synthetase C-terminal extension KFE98_21005 PF00698 Acyl transferase domain KFE98_21005 PF08240 Alcohol dehydrogenase GroES-like domain KFE98_21005 PF00107 Zinc-binding dehydrogenase KFE98_21005 PF08659 KR domain KFE98_21005 PF00550 Phosphopantetheine attachment site KFE98_21005 PF02801 Beta-ketoacyl synthase, C-terminal domain KFE98_21005 PF14765 Polyketide synthase dehydratase KFE98_21015 PF13533 Biotin-lipoyl like KFE98_21035 PF07859 alpha/beta hydrolase fold KFE98_21045 PF12833 Helix-turn-helix domain KFE98_21050 PF00106 short chain dehydrogenase KFE98_21070 PF12833 Helix-turn-helix domain KFE98_21070 PF02311 AraC-like ligand binding domain KFE98_21085 PF00106 short chain dehydrogenase KFE98_21090 PF00106 short chain dehydrogenase KFE98_21095 PF02311 AraC-like ligand binding domain KFE98_21095 PF12833 Helix-turn-helix domain KFE98_21140 PF10396 GTP-binding protein TrmE N-terminus KFE98_21140 PF12631 MnmE helical domain KFE98_21140 PF01926 50S ribosome-binding GTPase KFE98_21145 PF00801 PKD domain KFE98_21145 PF05547 Immune inhibitor A peptidase M6 KFE98_21160 PF03372 Endonuclease/Exonuclease/phosphatase family KFE98_21170 PF00549 CoA-ligase KFE98_21170 PF02629 CoA binding domain KFE98_21180 PF03193 RsgA GTPase KFE98_21215 PF00154 recA bacterial DNA recombination protein KFE98_21220 PF01752 Collagenase KFE98_21220 PF08453 Peptidase family M9 N-terminal KFE98_21230 PF00581 Rhodanese-like domain KFE98_21260 PF00211 Adenylate and Guanylate cyclase catalytic domain KFE98_21270 PF01594 AI-2E family transporter KFE98_21285 PF01872 RibD C-terminal domain KFE98_21310 PF00561 alpha/beta hydrolase fold KFE98_21320 PF04011 LemA family KFE98_21325 PF04536 TPM domain KFE98_21335 PF00512 His Kinase A (phospho-acceptor) domain KFE98_21335 PF09308 LuxQ, periplasmic KFE98_21335 PF00072 Response regulator receiver domain KFE98_21335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_21350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KFE98_21350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KFE98_21350 PF02824 TGS domain KFE98_21350 PF03129 Anticodon binding domain KFE98_21355 PF05198 Translation initiation factor IF-3, N-terminal domain KFE98_21355 PF00707 Translation initiation factor IF-3, C-terminal domain KFE98_21360 PF01632 Ribosomal protein L35 KFE98_21365 PF00453 Ribosomal protein L20 KFE98_21480 PF01339 CheB methylesterase KFE98_21480 PF00072 Response regulator receiver domain KFE98_21495 PF01588 Putative tRNA binding domain KFE98_21500 PF05736 OprF membrane domain KFE98_21500 PF00691 OmpA family KFE98_21515 PF00753 Metallo-beta-lactamase superfamily KFE98_21530 PF00360 Phytochrome region KFE98_21530 PF08446 PAS fold KFE98_21530 PF00512 His Kinase A (phospho-acceptor) domain KFE98_21530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_21530 PF01590 GAF domain KFE98_21545 PF07495 Y_Y_Y domain KFE98_21545 PF00072 Response regulator receiver domain KFE98_21545 PF07494 Two component regulator propeller KFE98_21545 PF12833 Helix-turn-helix domain KFE98_21545 PF00512 His Kinase A (phospho-acceptor) domain KFE98_21545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_21570 PF02190 ATP-dependent protease La (LON) substrate-binding domain KFE98_21570 PF00004 ATPase family associated with various cellular activities (AAA) KFE98_21570 PF05362 Lon protease (S16) C-terminal proteolytic domain KFE98_21580 PF01197 Ribosomal protein L31 KFE98_21610 PF00271 Helicase conserved C-terminal domain KFE98_21610 PF17757 UvrB interaction domain KFE98_21610 PF12344 Ultra-violet resistance protein B KFE98_21610 PF04851 Type III restriction enzyme, res subunit KFE98_21615 PF03150 Di-haem cytochrome c peroxidase KFE98_21615 PF00034 Cytochrome c KFE98_21635 PF13419 Haloacid dehalogenase-like hydrolase KFE98_21645 PF00171 Aldehyde dehydrogenase family KFE98_21665 PF00491 Arginase family KFE98_21670 PF17284 Spermidine synthase tetramerisation domain KFE98_21675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KFE98_21675 PF01872 RibD C-terminal domain KFE98_21680 PF09308 LuxQ, periplasmic KFE98_21680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFE98_21680 PF00512 His Kinase A (phospho-acceptor) domain KFE98_21680 PF00072 Response regulator receiver domain KFE98_21690 PF09186 Domain of unknown function (DUF1949) KFE98_21690 PF01205 Uncharacterized protein family UPF0029