locus-tag class description KFF05_00005 PF00308 Bacterial dnaA protein KFF05_00005 PF08299 Bacterial dnaA protein helix-turn-helix KFF05_00005 PF11638 DnaA N-terminal domain KFF05_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KFF05_00010 PF02767 DNA polymerase III beta subunit, central domain KFF05_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KFF05_00015 PF02463 RecF/RecN/SMC N terminal domain KFF05_00020 PF00204 DNA gyrase B KFF05_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KFF05_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_00020 PF01751 Toprim domain KFF05_00030 PF00912 Transglycosylase KFF05_00030 PF00905 Penicillin binding protein transpeptidase domain KFF05_00035 PF00294 pfkB family carbohydrate kinase KFF05_00035 PF01467 Cytidylyltransferase-like KFF05_00040 PF13580 SIS domain KFF05_00045 PF01370 NAD dependent epimerase/dehydratase family KFF05_00060 PF02277 Phosphoribosyltransferase KFF05_00065 PF02654 Cobalamin-5-phosphate synthase KFF05_00075 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KFF05_00080 PF02492 CobW/HypB/UreG, nucleotide-binding domain KFF05_00080 PF07683 Cobalamin synthesis protein cobW C-terminal domain KFF05_00085 PF02514 CobN/Magnesium Chelatase KFF05_00090 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP KFF05_00100 PF07685 CobB/CobQ-like glutamine amidotransferase domain KFF05_00110 PF00106 short chain dehydrogenase KFF05_00115 PF01329 Pterin 4 alpha carbinolamine dehydratase KFF05_00125 PF05552 Conserved TM helix KFF05_00125 PF00924 Mechanosensitive ion channel KFF05_00130 PF02954 Bacterial regulatory protein, Fis family KFF05_00130 PF00072 Response regulator receiver domain KFF05_00130 PF00158 Sigma-54 interaction domain KFF05_00150 PF02325 YGGT family KFF05_00155 PF02594 Uncharacterised ACR, YggU family COG1872 KFF05_00160 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KFF05_00160 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KFF05_00165 PF00313 'Cold-shock' DNA-binding domain KFF05_00175 PF01810 LysE type translocator KFF05_00180 PF00679 Elongation factor G C-terminus KFF05_00180 PF00009 Elongation factor Tu GTP binding domain KFF05_00180 PF03144 Elongation factor Tu domain 2 KFF05_00180 PF06421 GTP-binding protein LepA C-terminus KFF05_00200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KFF05_00200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KFF05_00205 PF08534 Redoxin KFF05_00215 PF01717 Cobalamin-independent synthase, Catalytic domain KFF05_00215 PF08267 Cobalamin-independent synthase, N-terminal domain KFF05_00220 PF00107 Zinc-binding dehydrogenase KFF05_00220 PF16884 N-terminal domain of oxidoreductase KFF05_00230 PF10017 Histidine-specific methyltransferase, SAM-dependent KFF05_00235 PF03781 Sulfatase-modifying factor enzyme 1 KFF05_00275 PF03737 Aldolase/RraA KFF05_00280 PF00291 Pyridoxal-phosphate dependent enzyme KFF05_00285 PF00883 Cytosol aminopeptidase family, catalytic domain KFF05_00285 PF02789 Cytosol aminopeptidase family, N-terminal domain KFF05_00305 PF01612 3'-5' exonuclease KFF05_00305 PF00570 HRDC domain KFF05_00310 PF01380 SIS domain KFF05_00310 PF00571 CBS domain KFF05_00325 PF00005 ABC transporter KFF05_00330 PF00309 Sigma-54 factor, Activator interacting domain (AID) KFF05_00330 PF04963 Sigma-54 factor, core binding domain KFF05_00330 PF04552 Sigma-54, DNA binding domain KFF05_00335 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KFF05_00335 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KFF05_00340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KFF05_00355 PF00011 Hsp20/alpha crystallin family KFF05_00365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KFF05_00370 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_00375 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_00375 PF12911 N-terminal TM domain of oligopeptide transport permease C KFF05_00380 PF00005 ABC transporter KFF05_00380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KFF05_00385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KFF05_00385 PF00005 ABC transporter KFF05_00395 PF00989 PAS fold KFF05_00395 PF00512 His Kinase A (phospho-acceptor) domain KFF05_00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_00400 PF00296 Luciferase-like monooxygenase KFF05_00410 PF02899 Phage integrase, N-terminal SAM-like domain KFF05_00410 PF00589 Phage integrase family KFF05_00510 PF00717 Peptidase S24-like KFF05_00515 PF00817 impB/mucB/samB family KFF05_00515 PF13438 Domain of unknown function (DUF4113) KFF05_00515 PF11799 impB/mucB/samB family C-terminal domain KFF05_00520 PF18821 Large polyvalent protein-associated domain 7 KFF05_00520 PF03432 Relaxase/Mobilisation nuclease domain KFF05_00550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KFF05_00555 PF02224 Cytidylate kinase KFF05_00560 PF00575 S1 RNA binding domain KFF05_00565 PF01343 Peptidase family S49 KFF05_00570 PF00216 Bacterial DNA-binding protein KFF05_00580 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KFF05_00585 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KFF05_00590 PF00291 Pyridoxal-phosphate dependent enzyme KFF05_00595 PF00290 Tryptophan synthase alpha chain KFF05_00600 PF01039 Carboxyl transferase domain KFF05_00605 PF08245 Mur ligase middle domain KFF05_00605 PF02875 Mur ligase family, glutamate ligase domain KFF05_00615 PF01545 Cation efflux family KFF05_00625 PF16123 Hydroxyacylglutathione hydrolase C-terminus KFF05_00625 PF00753 Metallo-beta-lactamase superfamily KFF05_00630 PF00085 Thioredoxin KFF05_00635 PF12705 PD-(D/E)XK nuclease superfamily KFF05_00635 PF00580 UvrD/REP helicase N-terminal domain KFF05_00635 PF13361 UvrD-like helicase C-terminal domain KFF05_00645 PF12804 MobA-like NTP transferase domain KFF05_00650 PF01636 Phosphotransferase enzyme family KFF05_00655 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KFF05_00660 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_00670 PF08755 Hemimethylated DNA-binding protein YccV like KFF05_00675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_00675 PF00512 His Kinase A (phospho-acceptor) domain KFF05_00680 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KFF05_00680 PF05221 S-adenosyl-L-homocysteine hydrolase KFF05_00685 PF13419 Haloacid dehalogenase-like hydrolase KFF05_00690 PF12697 Alpha/beta hydrolase family KFF05_00700 PF05524 PEP-utilising enzyme, N-terminal KFF05_00700 PF00391 PEP-utilising enzyme, mobile domain KFF05_00700 PF02896 PEP-utilising enzyme, TIM barrel domain KFF05_00705 PF00381 PTS HPr component phosphorylation site KFF05_00710 PF03610 PTS system fructose IIA component KFF05_00710 PF03830 PTS system sorbose subfamily IIB component KFF05_00715 PF03668 P-loop ATPase protein family KFF05_00720 PF07475 HPr Serine kinase C-terminal domain KFF05_00720 PF02603 HPr Serine kinase N terminus KFF05_00735 PF00672 HAMP domain KFF05_00735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_00735 PF00512 His Kinase A (phospho-acceptor) domain KFF05_00735 PF13755 Sensor N-terminal transmembrane domain KFF05_00735 PF13756 Stimulus-sensing domain KFF05_00740 PF00486 Transcriptional regulatory protein, C terminal KFF05_00740 PF00072 Response regulator receiver domain KFF05_00760 PF01293 Phosphoenolpyruvate carboxykinase KFF05_00780 PF07722 Peptidase C26 KFF05_00795 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KFF05_00795 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_00800 PF01493 GXGXG motif KFF05_00800 PF01645 Conserved region in glutamate synthase KFF05_00800 PF00310 Glutamine amidotransferases class-II KFF05_00800 PF04898 Glutamate synthase central domain KFF05_00805 PF02673 Bacitracin resistance protein BacA KFF05_00810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_00815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KFF05_00815 PF00005 ABC transporter KFF05_00820 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_00820 PF12911 N-terminal TM domain of oligopeptide transport permease C KFF05_00825 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_00830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KFF05_00835 PF00459 Inositol monophosphatase family KFF05_00840 PF00034 Cytochrome c KFF05_00845 PF01842 ACT domain KFF05_00845 PF00800 Prephenate dehydratase KFF05_00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_00860 PF00512 His Kinase A (phospho-acceptor) domain KFF05_00860 PF01627 Hpt domain KFF05_00860 PF00072 Response regulator receiver domain KFF05_00860 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFF05_00865 PF00293 NUDIX domain KFF05_00865 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KFF05_00865 PF09297 NADH pyrophosphatase zinc ribbon domain KFF05_00875 PF12170 DNA polymerase III tau subunit V interacting with alpha KFF05_00875 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KFF05_00875 PF12169 DNA polymerase III subunits gamma and tau domain III KFF05_00885 PF02575 YbaB/EbfC DNA-binding family KFF05_00890 PF02132 RecR protein KFF05_00890 PF13662 Toprim domain KFF05_00895 PF02646 RmuC family KFF05_00905 PF07662 Na+ dependent nucleoside transporter C-terminus KFF05_00905 PF01773 Na+ dependent nucleoside transporter N-terminus KFF05_00910 PF01327 Polypeptide deformylase KFF05_00915 PF02911 Formyl transferase, C-terminal domain KFF05_00915 PF00551 Formyl transferase KFF05_00920 PF01323 DSBA-like thioredoxin domain KFF05_00925 PF01541 GIY-YIG catalytic domain KFF05_00940 PF00313 'Cold-shock' DNA-binding domain KFF05_00945 PF00296 Luciferase-like monooxygenase KFF05_00950 PF02322 Cytochrome bd terminal oxidase subunit II KFF05_00955 PF01654 Cytochrome bd terminal oxidase subunit I KFF05_00970 PF01416 tRNA pseudouridine synthase KFF05_00980 PF01546 Peptidase family M20/M25/M40 KFF05_00980 PF07687 Peptidase dimerisation domain KFF05_00985 PF00132 Bacterial transferase hexapeptide (six repeats) KFF05_00985 PF14602 Hexapeptide repeat of succinyl-transferase KFF05_00985 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KFF05_01000 PF01425 Amidase KFF05_01005 PF00696 Amino acid kinase family KFF05_01010 PF01926 50S ribosome-binding GTPase KFF05_01015 PF02096 60Kd inner membrane protein KFF05_01015 PF14849 YidC periplasmic domain KFF05_01020 PF01809 Putative membrane protein insertion efficiency factor KFF05_01025 PF00825 Ribonuclease P KFF05_01030 PF00468 Ribosomal protein L34 KFF05_01045 PF00672 HAMP domain KFF05_01045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_01045 PF00512 His Kinase A (phospho-acceptor) domain KFF05_01045 PF00989 PAS fold KFF05_01050 PF13649 Methyltransferase domain KFF05_01060 PF02548 Ketopantoate hydroxymethyltransferase KFF05_01065 PF02569 Pantoate-beta-alanine ligase KFF05_01080 PF01266 FAD dependent oxidoreductase KFF05_01095 PF00753 Metallo-beta-lactamase superfamily KFF05_01105 PF00156 Phosphoribosyl transferase domain KFF05_01120 PF13640 2OG-Fe(II) oxygenase superfamily KFF05_01120 PF18331 PKHD-type hydroxylase C-terminal domain KFF05_01130 PF00893 Small Multidrug Resistance protein KFF05_01140 PF02515 CoA-transferase family III KFF05_01145 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_01145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KFF05_01155 PF01380 SIS domain KFF05_01160 PF14602 Hexapeptide repeat of succinyl-transferase KFF05_01160 PF12804 MobA-like NTP transferase domain KFF05_01160 PF00132 Bacterial transferase hexapeptide (six repeats) KFF05_01165 PF13419 Haloacid dehalogenase-like hydrolase KFF05_01195 PF03466 LysR substrate binding domain KFF05_01195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_01200 PF00529 HlyD membrane-fusion protein of T1SS KFF05_01200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF05_01205 PF01047 MarR family KFF05_01210 PF07690 Major Facilitator Superfamily KFF05_01215 PF00171 Aldehyde dehydrogenase family KFF05_01220 PF00875 DNA photolyase KFF05_01220 PF03441 FAD binding domain of DNA photolyase KFF05_01235 PF00580 UvrD/REP helicase N-terminal domain KFF05_01235 PF13361 UvrD-like helicase C-terminal domain KFF05_01250 PF00072 Response regulator receiver domain KFF05_01250 PF00486 Transcriptional regulatory protein, C terminal KFF05_01255 PF01895 PhoU domain KFF05_01260 PF00005 ABC transporter KFF05_01265 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_01270 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_01275 PF12849 PBP superfamily domain KFF05_01280 PF01384 Phosphate transporter family KFF05_01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_01285 PF00512 His Kinase A (phospho-acceptor) domain KFF05_01285 PF00989 PAS fold KFF05_01285 PF16736 Single Cache-like KFF05_01290 PF00990 Diguanylate cyclase, GGDEF domain KFF05_01300 PF00535 Glycosyl transferase family 2 KFF05_01310 PF13439 Glycosyltransferase Family 4 KFF05_01310 PF00534 Glycosyl transferases group 1 KFF05_01320 PF00166 Chaperonin 10 Kd subunit KFF05_01325 PF00118 TCP-1/cpn60 chaperonin family KFF05_01335 PF12697 Alpha/beta hydrolase family KFF05_01345 PF03861 ANTAR domain KFF05_01345 PF08376 Nitrate and nitrite sensing KFF05_01350 PF00440 Bacterial regulatory proteins, tetR family KFF05_01350 PF08361 MAATS-type transcriptional repressor, C-terminal region KFF05_01360 PF00106 short chain dehydrogenase KFF05_01365 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_01365 PF00107 Zinc-binding dehydrogenase KFF05_01370 PF01638 HxlR-like helix-turn-helix KFF05_01375 PF08376 Nitrate and nitrite sensing KFF05_01375 PF03861 ANTAR domain KFF05_01385 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_01390 PF00005 ABC transporter KFF05_01395 PF02560 Cyanate lyase C-terminal domain KFF05_01405 PF07683 Cobalamin synthesis protein cobW C-terminal domain KFF05_01405 PF02492 CobW/HypB/UreG, nucleotide-binding domain KFF05_01425 PF00989 PAS fold KFF05_01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_01425 PF00512 His Kinase A (phospho-acceptor) domain KFF05_01430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KFF05_01430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KFF05_01440 PF13307 Helicase C-terminal domain KFF05_01440 PF00929 Exonuclease KFF05_01440 PF04851 Type III restriction enzyme, res subunit KFF05_01445 PF02965 Vitamin B12 dependent methionine synthase, activation domain KFF05_01445 PF00809 Pterin binding enzyme KFF05_01445 PF02574 Homocysteine S-methyltransferase KFF05_01445 PF02310 B12 binding domain KFF05_01445 PF02607 B12 binding domain KFF05_01450 PF02219 Methylenetetrahydrofolate reductase KFF05_01455 PF13847 Methyltransferase domain KFF05_01470 PF12848 ABC transporter KFF05_01470 PF00005 ABC transporter KFF05_01475 PF00929 Exonuclease KFF05_01520 PF01842 ACT domain KFF05_01520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_01520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_01525 PF00330 Aconitase family (aconitate hydratase) KFF05_01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_01530 PF03466 LysR substrate binding domain KFF05_01535 PF03313 Serine dehydratase alpha chain KFF05_01535 PF03315 Serine dehydratase beta chain KFF05_01540 PF03466 LysR substrate binding domain KFF05_01540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_01545 PF03328 HpcH/HpaI aldolase/citrate lyase family KFF05_01550 PF02515 CoA-transferase family III KFF05_01565 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KFF05_01575 PF02515 CoA-transferase family III KFF05_01580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KFF05_01580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KFF05_01585 PF07729 FCD domain KFF05_01585 PF00392 Bacterial regulatory proteins, gntR family KFF05_01605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_01605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_01610 PF02615 Malate/L-lactate dehydrogenase KFF05_01615 PF00027 Cyclic nucleotide-binding domain KFF05_01615 PF13545 Crp-like helix-turn-helix domain KFF05_01620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KFF05_01630 PF02630 SCO1/SenC KFF05_01635 PF00005 ABC transporter KFF05_01645 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_01655 PF00578 AhpC/TSA family KFF05_01660 PF07702 UTRA domain KFF05_01660 PF00392 Bacterial regulatory proteins, gntR family KFF05_01675 PF02910 Fumarate reductase flavoprotein C-term KFF05_01675 PF00890 FAD binding domain KFF05_01685 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KFF05_01685 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KFF05_01685 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KFF05_01690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_01695 PF04955 HupE / UreJ protein KFF05_01700 PF01402 Ribbon-helix-helix protein, copG family KFF05_01700 PF08753 NikR C terminal nickel binding domain KFF05_01725 PF00005 ABC transporter KFF05_01730 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_01740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_01740 PF03466 LysR substrate binding domain KFF05_01750 PF04545 Sigma-70, region 4 KFF05_01750 PF00140 Sigma-70 factor, region 1.2 KFF05_01750 PF04542 Sigma-70 region 2 KFF05_01750 PF03979 Sigma-70 factor, region 1.1 KFF05_01750 PF04546 Sigma-70, non-essential region KFF05_01750 PF04539 Sigma-70 region 3 KFF05_01755 PF10410 DnaB-helicase binding domain of primase KFF05_01755 PF01807 CHC2 zinc finger KFF05_01755 PF13662 Toprim domain KFF05_01755 PF08275 DNA primase catalytic core, N-terminal domain KFF05_01755 PF08278 DNA primase DnaG DnaB-binding KFF05_01765 PF00117 Glutamine amidotransferase class-I KFF05_01765 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KFF05_01770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFF05_01770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KFF05_01770 PF02142 MGS-like domain KFF05_01775 PF01272 Transcription elongation factor, GreA/GreB, C-term KFF05_01775 PF03449 Transcription elongation factor, N-terminal KFF05_01795 PF00756 Putative esterase KFF05_01810 PF00107 Zinc-binding dehydrogenase KFF05_01810 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_01825 PF02515 CoA-transferase family III KFF05_01830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_01830 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_01830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_01835 PF01641 SelR domain KFF05_01850 PF02798 Glutathione S-transferase, N-terminal domain KFF05_01850 PF00043 Glutathione S-transferase, C-terminal domain KFF05_01855 PF01380 SIS domain KFF05_01855 PF00571 CBS domain KFF05_01860 PF02798 Glutathione S-transferase, N-terminal domain KFF05_01870 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_01895 PF00080 Copper/zinc superoxide dismutase (SODC) KFF05_01900 PF00106 short chain dehydrogenase KFF05_01905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_01905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_01910 PF00578 AhpC/TSA family KFF05_01915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_01915 PF00512 His Kinase A (phospho-acceptor) domain KFF05_01915 PF01627 Hpt domain KFF05_01915 PF00072 Response regulator receiver domain KFF05_01925 PF00563 EAL domain KFF05_01925 PF00990 Diguanylate cyclase, GGDEF domain KFF05_01925 PF03707 Bacterial signalling protein N terminal repeat KFF05_01930 PF00512 His Kinase A (phospho-acceptor) domain KFF05_01930 PF08448 PAS fold KFF05_01930 PF00072 Response regulator receiver domain KFF05_01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_01930 PF13188 PAS domain KFF05_01935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_01935 PF00672 HAMP domain KFF05_01945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_01945 PF00672 HAMP domain KFF05_01945 PF12729 Four helix bundle sensory module for signal transduction KFF05_01950 PF00072 Response regulator receiver domain KFF05_01950 PF00196 Bacterial regulatory proteins, luxR family KFF05_01965 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_01985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KFF05_01985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KFF05_01990 PF00753 Metallo-beta-lactamase superfamily KFF05_01990 PF12706 Beta-lactamase superfamily domain KFF05_01995 PF02515 CoA-transferase family III KFF05_02000 PF01758 Sodium Bile acid symporter family KFF05_02015 PF01970 Tripartite tricarboxylate transporter TctA family KFF05_02090 PF08544 GHMP kinases C terminal KFF05_02090 PF00288 GHMP kinases N terminal domain KFF05_02105 PF00313 'Cold-shock' DNA-binding domain KFF05_02115 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_02115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KFF05_02125 PF00072 Response regulator receiver domain KFF05_02125 PF00672 HAMP domain KFF05_02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_02125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KFF05_02125 PF01627 Hpt domain KFF05_02125 PF00512 His Kinase A (phospho-acceptor) domain KFF05_02135 PF03167 Uracil DNA glycosylase superfamily KFF05_02140 PF01464 Transglycosylase SLT domain KFF05_02145 PF00994 Probable molybdopterin binding domain KFF05_02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_02165 PF03466 LysR substrate binding domain KFF05_02195 PF00999 Sodium/hydrogen exchanger family KFF05_02200 PF01351 Ribonuclease HII KFF05_02205 PF01555 DNA methylase KFF05_02205 PF18755 Restriction Enzyme Adenine Methylase Associated KFF05_02210 PF01553 Acyltransferase KFF05_02220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KFF05_02230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KFF05_02230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KFF05_02235 PF01923 Cobalamin adenosyltransferase KFF05_02255 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_02255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_02255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_02260 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_02260 PF00107 Zinc-binding dehydrogenase KFF05_02265 PF02310 B12 binding domain KFF05_02265 PF01642 Methylmalonyl-CoA mutase KFF05_02270 PF00440 Bacterial regulatory proteins, tetR family KFF05_02285 PF01321 Creatinase/Prolidase N-terminal domain KFF05_02285 PF00557 Metallopeptidase family M24 KFF05_02295 PF00578 AhpC/TSA family KFF05_02295 PF10417 C-terminal domain of 1-Cys peroxiredoxin KFF05_02305 PF08534 Redoxin KFF05_02310 PF00206 Lyase KFF05_02310 PF14698 Argininosuccinate lyase C-terminal KFF05_02320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KFF05_02320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KFF05_02335 PF00005 ABC transporter KFF05_02355 PF02867 Ribonucleotide reductase, barrel domain KFF05_02355 PF00317 Ribonucleotide reductase, all-alpha domain KFF05_02355 PF03477 ATP cone domain KFF05_02375 PF02622 Uncharacterized ACR, COG1678 KFF05_02400 PF04314 Copper chaperone PCu(A)C KFF05_02405 PF02153 Prephenate dehydrogenase KFF05_02410 PF00155 Aminotransferase class I and II KFF05_02440 PF00141 Peroxidase KFF05_02460 PF02803 Thiolase, C-terminal domain KFF05_02460 PF00108 Thiolase, N-terminal domain KFF05_02465 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus KFF05_02465 PF00561 alpha/beta hydrolase fold KFF05_02470 PF05233 PHB accumulation regulatory domain KFF05_02470 PF07879 PHB/PHA accumulation regulator DNA-binding domain KFF05_02475 PF00069 Protein kinase domain KFF05_02475 PF03781 Sulfatase-modifying factor enzyme 1 KFF05_02480 PF01544 CorA-like Mg2+ transporter protein KFF05_02485 PF08331 Domain of unknown function (DUF1730) KFF05_02490 PF06508 Queuosine biosynthesis protein QueC KFF05_02500 PF02743 Cache domain KFF05_02500 PF00211 Adenylate and Guanylate cyclase catalytic domain KFF05_02500 PF00672 HAMP domain KFF05_02505 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF05_02505 PF01799 [2Fe-2S] binding domain KFF05_02510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KFF05_02520 PF01242 6-pyruvoyl tetrahydropterin synthase KFF05_02525 PF01242 6-pyruvoyl tetrahydropterin synthase KFF05_02535 PF14489 QueF-like protein KFF05_02540 PF01702 Queuine tRNA-ribosyltransferase KFF05_02545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_02545 PF16591 Helical bimodular sensor domain KFF05_02545 PF00672 HAMP domain KFF05_02555 PF02547 Queuosine biosynthesis protein KFF05_02570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KFF05_02570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KFF05_02580 PF02515 CoA-transferase family III KFF05_02585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KFF05_02590 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_02595 PF12911 N-terminal TM domain of oligopeptide transport permease C KFF05_02595 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_02600 PF00005 ABC transporter KFF05_02600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KFF05_02605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KFF05_02605 PF00005 ABC transporter KFF05_02620 PF01425 Amidase KFF05_02625 PF01425 Amidase KFF05_02640 PF00595 PDZ domain KFF05_02640 PF13180 PDZ domain KFF05_02645 PF00596 Class II Aldolase and Adducin N-terminal domain KFF05_02650 PF00733 Asparagine synthase KFF05_02650 PF13537 Glutamine amidotransferase domain KFF05_02655 PF18419 ATP-grasp-like domain KFF05_02655 PF08443 RimK-like ATP-grasp domain KFF05_02655 PF04262 Glutamate-cysteine ligase KFF05_02655 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KFF05_02670 PF10414 Sirohaem synthase dimerisation region KFF05_02670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF05_02680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KFF05_02680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KFF05_02695 PF00082 Subtilase family KFF05_02705 PF01614 Bacterial transcriptional regulator KFF05_02705 PF09339 IclR helix-turn-helix domain KFF05_02710 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_02715 PF00171 Aldehyde dehydrogenase family KFF05_02720 PF08442 ATP-grasp domain KFF05_02720 PF00549 CoA-ligase KFF05_02725 PF00549 CoA-ligase KFF05_02725 PF02629 CoA binding domain KFF05_02740 PF00999 Sodium/hydrogen exchanger family KFF05_02740 PF02254 TrkA-N domain KFF05_02745 PF05199 GMC oxidoreductase KFF05_02745 PF00732 GMC oxidoreductase KFF05_02750 PF01266 FAD dependent oxidoreductase KFF05_02765 PF00210 Ferritin-like domain KFF05_02770 PF00210 Ferritin-like domain KFF05_02775 PF03150 Di-haem cytochrome c peroxidase KFF05_02780 PF00209 Sodium:neurotransmitter symporter family KFF05_02790 PF03741 Integral membrane protein TerC family KFF05_02810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KFF05_02810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KFF05_02825 PF00392 Bacterial regulatory proteins, gntR family KFF05_02825 PF07702 UTRA domain KFF05_02830 PF13085 2Fe-2S iron-sulfur cluster binding domain KFF05_02830 PF13183 4Fe-4S dicluster domain KFF05_02850 PF05681 Fumarate hydratase (Fumerase) KFF05_02855 PF05681 Fumarate hydratase (Fumerase) KFF05_02855 PF05683 Fumarase C-terminus KFF05_02860 PF00890 FAD binding domain KFF05_02860 PF02910 Fumarate reductase flavoprotein C-term KFF05_02885 PF01515 Phosphate acetyl/butaryl transferase KFF05_02890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF05_02890 PF00205 Thiamine pyrophosphate enzyme, central domain KFF05_02890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_02895 PF00392 Bacterial regulatory proteins, gntR family KFF05_02895 PF00155 Aminotransferase class I and II KFF05_02900 PF00202 Aminotransferase class-III KFF05_02915 PF00923 Transaldolase/Fructose-6-phosphate aldolase KFF05_02920 PF02580 D-Tyr-tRNA(Tyr) deacylase KFF05_02930 PF00486 Transcriptional regulatory protein, C terminal KFF05_02930 PF00072 Response regulator receiver domain KFF05_02935 PF00512 His Kinase A (phospho-acceptor) domain KFF05_02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_02935 PF00672 HAMP domain KFF05_02960 PF01557 Fumarylacetoacetate (FAA) hydrolase family KFF05_02965 PF08007 Cupin superfamily protein KFF05_02980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KFF05_02980 PF13378 Enolase C-terminal domain-like KFF05_03005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KFF05_03005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KFF05_03010 PF01799 [2Fe-2S] binding domain KFF05_03010 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF05_03015 PF03450 CO dehydrogenase flavoprotein C-terminal domain KFF05_03015 PF00941 FAD binding domain in molybdopterin dehydrogenase KFF05_03030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF05_03040 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF05_03050 PF07729 FCD domain KFF05_03050 PF00392 Bacterial regulatory proteins, gntR family KFF05_03055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_03055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_03060 PF02310 B12 binding domain KFF05_03060 PF04055 Radical SAM superfamily KFF05_03070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_03070 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_03070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_03080 PF02515 CoA-transferase family III KFF05_03085 PF02798 Glutathione S-transferase, N-terminal domain KFF05_03085 PF14497 Glutathione S-transferase, C-terminal domain KFF05_03090 PF00892 EamA-like transporter family KFF05_03125 PF16861 Carbamoyltransferase C-terminus KFF05_03125 PF02543 Carbamoyltransferase N-terminus KFF05_03130 PF00890 FAD binding domain KFF05_03130 PF14537 Cytochrome c3 KFF05_03150 PF00881 Nitroreductase family KFF05_03160 PF00491 Arginase family KFF05_03170 PF09084 NMT1/THI5 like KFF05_03175 PF00107 Zinc-binding dehydrogenase KFF05_03175 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_03180 PF00107 Zinc-binding dehydrogenase KFF05_03180 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_03190 PF01645 Conserved region in glutamate synthase KFF05_03195 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_03200 PF03466 LysR substrate binding domain KFF05_03205 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_03210 PF00561 alpha/beta hydrolase fold KFF05_03215 PF00465 Iron-containing alcohol dehydrogenase KFF05_03220 PF01063 Amino-transferase class IV KFF05_03235 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KFF05_03235 PF00749 tRNA synthetases class I (E and Q), catalytic domain KFF05_03240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_03240 PF00512 His Kinase A (phospho-acceptor) domain KFF05_03240 PF00989 PAS fold KFF05_03245 PF04304 Protein of unknown function (DUF454) KFF05_03250 PF00005 ABC transporter KFF05_03260 PF00672 HAMP domain KFF05_03260 PF00072 Response regulator receiver domain KFF05_03260 PF01627 Hpt domain KFF05_03260 PF00512 His Kinase A (phospho-acceptor) domain KFF05_03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_03265 PF13378 Enolase C-terminal domain-like KFF05_03265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KFF05_03270 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KFF05_03270 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KFF05_03275 PF00941 FAD binding domain in molybdopterin dehydrogenase KFF05_03275 PF03450 CO dehydrogenase flavoprotein C-terminal domain KFF05_03280 PF01799 [2Fe-2S] binding domain KFF05_03280 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF05_03285 PF12804 MobA-like NTP transferase domain KFF05_03285 PF00132 Bacterial transferase hexapeptide (six repeats) KFF05_03295 PF02625 XdhC and CoxI family KFF05_03295 PF13478 XdhC Rossmann domain KFF05_03300 PF00266 Aminotransferase class-V KFF05_03315 PF00027 Cyclic nucleotide-binding domain KFF05_03315 PF13545 Crp-like helix-turn-helix domain KFF05_03320 PF03597 Cytochrome oxidase maturation protein cbb3-type KFF05_03325 PF00403 Heavy-metal-associated domain KFF05_03335 PF12801 4Fe-4S binding domain KFF05_03335 PF13746 4Fe-4S dicluster domain KFF05_03335 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KFF05_03340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KFF05_03340 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KFF05_03340 PF00034 Cytochrome c KFF05_03355 PF00115 Cytochrome C and Quinol oxidase polypeptide I KFF05_03365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_03365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_03365 PF01842 ACT domain KFF05_03375 PF00571 CBS domain KFF05_03375 PF01769 Divalent cation transporter KFF05_03375 PF03448 MgtE intracellular N domain KFF05_03380 PF00571 CBS domain KFF05_03380 PF01769 Divalent cation transporter KFF05_03380 PF03448 MgtE intracellular N domain KFF05_03385 PF05552 Conserved TM helix KFF05_03390 PF00118 TCP-1/cpn60 chaperonin family KFF05_03395 PF00166 Chaperonin 10 Kd subunit KFF05_03400 PF06233 Usg-like family KFF05_03405 PF03169 OPT oligopeptide transporter protein KFF05_03410 PF00486 Transcriptional regulatory protein, C terminal KFF05_03410 PF00072 Response regulator receiver domain KFF05_03420 PF00672 HAMP domain KFF05_03420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_03420 PF00512 His Kinase A (phospho-acceptor) domain KFF05_03430 PF01381 Helix-turn-helix KFF05_03430 PF06114 IrrE N-terminal-like domain KFF05_03430 PF09856 Predicted transcriptional regulator (DUF2083) KFF05_03435 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_03440 PF00005 ABC transporter KFF05_03445 PF12849 PBP superfamily domain KFF05_03455 PF03458 UPF0126 domain KFF05_03465 PF13417 Glutathione S-transferase, N-terminal domain KFF05_03475 PF00989 PAS fold KFF05_03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_03475 PF00512 His Kinase A (phospho-acceptor) domain KFF05_03480 PF00512 His Kinase A (phospho-acceptor) domain KFF05_03480 PF00989 PAS fold KFF05_03480 PF13188 PAS domain KFF05_03480 PF13426 PAS domain KFF05_03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_03485 PF00682 HMGL-like KFF05_03490 PF01039 Carboxyl transferase domain KFF05_03495 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_03495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_03495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_03500 PF01042 Endoribonuclease L-PSP KFF05_03515 PF00180 Isocitrate/isopropylmalate dehydrogenase KFF05_03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_03520 PF00512 His Kinase A (phospho-acceptor) domain KFF05_03540 PF00394 Multicopper oxidase KFF05_03540 PF07732 Multicopper oxidase KFF05_03545 PF00034 Cytochrome c KFF05_03555 PF07171 MlrC C-terminus KFF05_03555 PF07364 Metallopeptidase family M81 KFF05_03560 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_03570 PF17862 AAA+ lid domain KFF05_03570 PF06480 FtsH Extracellular KFF05_03570 PF01434 Peptidase family M41 KFF05_03570 PF00004 ATPase family associated with various cellular activities (AAA) KFF05_03575 PF00891 O-methyltransferase domain KFF05_03580 PF02028 BCCT, betaine/carnitine/choline family transporter KFF05_03585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_03585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF05_03600 PF02653 Branched-chain amino acid transport system / permease component KFF05_03610 PF00005 ABC transporter KFF05_03610 PF12399 Branched-chain amino acid ATP-binding cassette transporter KFF05_03620 PF01774 UreD urease accessory protein KFF05_03625 PF00547 Urease, gamma subunit KFF05_03630 PF00699 Urease beta subunit KFF05_03635 PF01979 Amidohydrolase family KFF05_03635 PF00449 Urease alpha-subunit, N-terminal domain KFF05_03640 PF05194 UreE urease accessory protein, C-terminal domain KFF05_03640 PF02814 UreE urease accessory protein, N-terminal domain KFF05_03645 PF01730 UreF KFF05_03650 PF02492 CobW/HypB/UreG, nucleotide-binding domain KFF05_03670 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF05_03680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF05_03690 PF12680 SnoaL-like domain KFF05_03690 PF04542 Sigma-70 region 2 KFF05_03690 PF08281 Sigma-70, region 4 KFF05_03700 PF07715 TonB-dependent Receptor Plug Domain KFF05_03700 PF07660 Secretin and TonB N terminus short domain KFF05_03700 PF00593 TonB dependent receptor KFF05_03705 PF00155 Aminotransferase class I and II KFF05_03710 PF01522 Polysaccharide deacetylase KFF05_03715 PF00583 Acetyltransferase (GNAT) family KFF05_03715 PF00795 Carbon-nitrogen hydrolase KFF05_03740 PF09382 RQC domain KFF05_03740 PF16124 RecQ zinc-binding KFF05_03740 PF00570 HRDC domain KFF05_03740 PF00270 DEAD/DEAH box helicase KFF05_03740 PF00271 Helicase conserved C-terminal domain KFF05_03750 PF02615 Malate/L-lactate dehydrogenase KFF05_03770 PF00873 AcrB/AcrD/AcrF family KFF05_03785 PF13192 Thioredoxin domain KFF05_03795 PF13411 MerR HTH family regulatory protein KFF05_03805 PF07732 Multicopper oxidase KFF05_03805 PF07731 Multicopper oxidase KFF05_03805 PF00394 Multicopper oxidase KFF05_03825 PF08534 Redoxin KFF05_03830 PF08534 Redoxin KFF05_03840 PF02630 SCO1/SenC KFF05_03855 PF13411 MerR HTH family regulatory protein KFF05_03860 PF00672 HAMP domain KFF05_03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_03860 PF00512 His Kinase A (phospho-acceptor) domain KFF05_03865 PF00486 Transcriptional regulatory protein, C terminal KFF05_03865 PF00072 Response regulator receiver domain KFF05_03890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF05_03890 PF00529 HlyD membrane-fusion protein of T1SS KFF05_03895 PF00873 AcrB/AcrD/AcrF family KFF05_03925 PF01555 DNA methylase KFF05_03950 PF00239 Resolvase, N terminal domain KFF05_03950 PF02796 Helix-turn-helix domain of resolvase KFF05_03965 PF00829 Ribosomal prokaryotic L21 protein KFF05_03970 PF01016 Ribosomal L27 protein KFF05_03975 PF01018 GTP1/OBG KFF05_03975 PF01926 50S ribosome-binding GTPase KFF05_03980 PF00696 Amino acid kinase family KFF05_03980 PF01472 PUA domain KFF05_03985 PF00171 Aldehyde dehydrogenase family KFF05_03990 PF01467 Cytidylyltransferase-like KFF05_04000 PF02590 Predicted SPOUT methyltransferase KFF05_04005 PF01676 Metalloenzyme superfamily KFF05_04005 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KFF05_04010 PF01551 Peptidase family M23 KFF05_04015 PF13180 PDZ domain KFF05_04015 PF03572 Peptidase family S41 KFF05_04025 PF00293 NUDIX domain KFF05_04030 PF01699 Sodium/calcium exchanger protein KFF05_04040 PF02152 Dihydroneopterin aldolase KFF05_04045 PF12826 Helix-hairpin-helix motif KFF05_04045 PF08459 UvrC Helix-hairpin-helix N-terminal KFF05_04045 PF01541 GIY-YIG catalytic domain KFF05_04045 PF02151 UvrB/uvrC motif KFF05_04050 PF01066 CDP-alcohol phosphatidyltransferase KFF05_04055 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KFF05_04060 PF00994 Probable molybdopterin binding domain KFF05_04060 PF03453 MoeA N-terminal region (domain I and II) KFF05_04060 PF03454 MoeA C-terminal region (domain IV) KFF05_04065 PF02597 ThiS family KFF05_04070 PF02391 MoaE protein KFF05_04075 PF13419 Haloacid dehalogenase-like hydrolase KFF05_04085 PF00672 HAMP domain KFF05_04085 PF00211 Adenylate and Guanylate cyclase catalytic domain KFF05_04090 PF01063 Amino-transferase class IV KFF05_04095 PF12802 MarR family KFF05_04100 PF00072 Response regulator receiver domain KFF05_04100 PF00486 Transcriptional regulatory protein, C terminal KFF05_04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_04105 PF00672 HAMP domain KFF05_04105 PF00512 His Kinase A (phospho-acceptor) domain KFF05_04110 PF00072 Response regulator receiver domain KFF05_04110 PF00196 Bacterial regulatory proteins, luxR family KFF05_04115 PF00672 HAMP domain KFF05_04115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_04115 PF00512 His Kinase A (phospho-acceptor) domain KFF05_04115 PF01627 Hpt domain KFF05_04115 PF00072 Response regulator receiver domain KFF05_04115 PF17149 Periplasmic sensor domain found in signal transduction proteins KFF05_04120 PF01588 Putative tRNA binding domain KFF05_04135 PF03807 NADP oxidoreductase coenzyme F420-dependent KFF05_04135 PF14748 Pyrroline-5-carboxylate reductase dimerisation KFF05_04150 PF01370 NAD dependent epimerase/dehydratase family KFF05_04155 PF01790 Prolipoprotein diacylglyceryl transferase KFF05_04165 PF02578 Multi-copper polyphenol oxidoreductase laccase KFF05_04175 PF14572 Phosphoribosyl synthetase-associated domain KFF05_04175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KFF05_04185 PF02659 Putative manganese efflux pump KFF05_04190 PF15887 Putative zinc-binding metallo-peptidase KFF05_04190 PF10005 zinc-ribbon domain KFF05_04200 PF01386 Ribosomal L25p family KFF05_04200 PF14693 Ribosomal protein TL5, C-terminal domain KFF05_04205 PF01195 Peptidyl-tRNA hydrolase KFF05_04210 PF06071 Protein of unknown function (DUF933) KFF05_04210 PF01926 50S ribosome-binding GTPase KFF05_04215 PF13180 PDZ domain KFF05_04220 PF01738 Dienelactone hydrolase family KFF05_04225 PF01048 Phosphorylase superfamily KFF05_04235 PF01008 Initiation factor 2 subunit family KFF05_04245 PF00043 Glutathione S-transferase, C-terminal domain KFF05_04245 PF02798 Glutathione S-transferase, N-terminal domain KFF05_04250 PF01370 NAD dependent epimerase/dehydratase family KFF05_04265 PF02167 Cytochrome C1 family KFF05_04270 PF00033 Cytochrome b/b6/petB KFF05_04270 PF00032 Cytochrome b(C-terminal)/b6/petD KFF05_04275 PF00355 Rieske [2Fe-2S] domain KFF05_04275 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KFF05_04280 PF00588 SpoU rRNA Methylase family KFF05_04285 PF01218 Coproporphyrinogen III oxidase KFF05_04300 PF00460 Flagella basal body rod protein KFF05_04300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF05_04305 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_04305 PF00107 Zinc-binding dehydrogenase KFF05_04315 PF02678 Pirin KFF05_04315 PF17954 Quercetinase C-terminal cupin domain KFF05_04320 PF13409 Glutathione S-transferase, N-terminal domain KFF05_04325 PF02525 Flavodoxin-like fold KFF05_04330 PF03466 LysR substrate binding domain KFF05_04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_04335 PF00205 Thiamine pyrophosphate enzyme, central domain KFF05_04335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_04335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF05_04340 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_04360 PF07726 ATPase family associated with various cellular activities (AAA) KFF05_04360 PF17863 AAA lid domain KFF05_04370 PF00293 NUDIX domain KFF05_04380 PF13735 tRNA nucleotidyltransferase domain 2 putative KFF05_04380 PF01743 Poly A polymerase head domain KFF05_04380 PF12627 Probable RNA and SrmB- binding site of polymerase A KFF05_04405 PF12833 Helix-turn-helix domain KFF05_04405 PF14525 AraC-binding-like domain KFF05_04435 PF02567 Phenazine biosynthesis-like protein KFF05_04440 PF08447 PAS fold KFF05_04440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_04445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_04450 PF02347 Glycine cleavage system P-protein KFF05_04455 PF01597 Glycine cleavage H-protein KFF05_04460 PF01571 Aminomethyltransferase folate-binding domain KFF05_04460 PF08669 Glycine cleavage T-protein C-terminal barrel domain KFF05_04475 PF01636 Phosphotransferase enzyme family KFF05_04480 PF00075 RNase H KFF05_04490 PF03466 LysR substrate binding domain KFF05_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_04505 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_04510 PF08402 TOBE domain KFF05_04510 PF00005 ABC transporter KFF05_04515 PF08534 Redoxin KFF05_04520 PF11412 Disulphide bond corrector protein DsbC KFF05_04520 PF02683 Cytochrome C biogenesis protein transmembrane region KFF05_04525 PF02622 Uncharacterized ACR, COG1678 KFF05_04540 PF05193 Peptidase M16 inactive domain KFF05_04540 PF00675 Insulinase (Peptidase family M16) KFF05_04545 PF14821 Threonine synthase N terminus KFF05_04545 PF00291 Pyridoxal-phosphate dependent enzyme KFF05_04550 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KFF05_04555 PF01040 UbiA prenyltransferase family KFF05_04560 PF00115 Cytochrome C and Quinol oxidase polypeptide I KFF05_04565 PF04238 Protein of unknown function (DUF420) KFF05_04570 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KFF05_04570 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KFF05_04575 PF00115 Cytochrome C and Quinol oxidase polypeptide I KFF05_04580 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KFF05_04585 PF00510 Cytochrome c oxidase subunit III KFF05_04615 PF00561 alpha/beta hydrolase fold KFF05_04615 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus KFF05_04620 PF05231 MASE1 KFF05_04620 PF00563 EAL domain KFF05_04625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_04625 PF08269 Cache domain KFF05_04630 PF07228 Stage II sporulation protein E (SpoIIE) KFF05_04630 PF00672 HAMP domain KFF05_04640 PF02405 Permease MlaE KFF05_04645 PF00005 ABC transporter KFF05_04660 PF05958 tRNA (Uracil-5-)-methyltransferase KFF05_04665 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) KFF05_04670 PF00072 Response regulator receiver domain KFF05_04670 PF08769 Sporulation initiation factor Spo0A C terminal KFF05_04680 PF04107 Glutamate-cysteine ligase family 2(GCS2) KFF05_04690 PF00892 EamA-like transporter family KFF05_04700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KFF05_04710 PF04143 Sulphur transport KFF05_04725 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding KFF05_04725 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_04725 PF10518 TAT (twin-arginine translocation) pathway signal sequence KFF05_04755 PF02872 5'-nucleotidase, C-terminal domain KFF05_04755 PF00149 Calcineurin-like phosphoesterase KFF05_04760 PF02683 Cytochrome C biogenesis protein transmembrane region KFF05_04775 PF00174 Oxidoreductase molybdopterin binding domain KFF05_04780 PF00034 Cytochrome c KFF05_04800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KFF05_04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_04810 PF00512 His Kinase A (phospho-acceptor) domain KFF05_04810 PF16736 Single Cache-like KFF05_04810 PF00989 PAS fold KFF05_04815 PF00561 alpha/beta hydrolase fold KFF05_04815 PF08386 TAP-like protein KFF05_04825 PF01634 ATP phosphoribosyltransferase KFF05_04830 PF00815 Histidinol dehydrogenase KFF05_04835 PF06793 Uncharacterised protein family (UPF0262) KFF05_04840 PF01451 Low molecular weight phosphotyrosine protein phosphatase KFF05_04865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_04865 PF03466 LysR substrate binding domain KFF05_04870 PF01176 Translation initiation factor 1A / IF-1 KFF05_04875 PF02545 Maf-like protein KFF05_04880 PF10150 Ribonuclease E/G family KFF05_04880 PF00575 S1 RNA binding domain KFF05_04885 PF03884 DNA gyrase inhibitor YacG KFF05_04900 PF05995 Cysteine dioxygenase type I KFF05_04905 PF01614 Bacterial transcriptional regulator KFF05_04905 PF09339 IclR helix-turn-helix domain KFF05_04910 PF02515 CoA-transferase family III KFF05_04920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KFF05_04920 PF00384 Molybdopterin oxidoreductase KFF05_04920 PF01568 Molydopterin dinucleotide binding domain KFF05_04930 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_04935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_04935 PF03466 LysR substrate binding domain KFF05_04945 PF12411 Choline sulfatase enzyme C terminal KFF05_04945 PF00884 Sulfatase KFF05_04950 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) KFF05_04955 PF00384 Molybdopterin oxidoreductase KFF05_04955 PF01568 Molydopterin dinucleotide binding domain KFF05_04965 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_04970 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_04975 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_04980 PF00005 ABC transporter KFF05_04995 PF00890 FAD binding domain KFF05_04995 PF14537 Cytochrome c3 KFF05_05000 PF01841 Transglutaminase-like superfamily KFF05_05000 PF08379 Bacterial transglutaminase-like N-terminal region KFF05_05005 PF14403 Circularly permuted ATP-grasp type 2 KFF05_05005 PF04168 A predicted alpha-helical domain with a conserved ER motif. KFF05_05015 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_05015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_05015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_05020 PF00682 HMGL-like KFF05_05025 PF00378 Enoyl-CoA hydratase/isomerase KFF05_05030 PF02515 CoA-transferase family III KFF05_05045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_05045 PF03466 LysR substrate binding domain KFF05_05055 PF00005 ABC transporter KFF05_05060 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_05065 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_05070 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_05070 PF00107 Zinc-binding dehydrogenase KFF05_05085 PF03401 Tripartite tricarboxylate transporter family receptor KFF05_05090 PF00392 Bacterial regulatory proteins, gntR family KFF05_05090 PF07702 UTRA domain KFF05_05095 PF13378 Enolase C-terminal domain-like KFF05_05095 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KFF05_05100 PF00753 Metallo-beta-lactamase superfamily KFF05_05105 PF08269 Cache domain KFF05_05105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_05120 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain KFF05_05120 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 KFF05_05125 PF00672 HAMP domain KFF05_05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_05125 PF00512 His Kinase A (phospho-acceptor) domain KFF05_05125 PF01627 Hpt domain KFF05_05125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KFF05_05125 PF00072 Response regulator receiver domain KFF05_05130 PF01515 Phosphate acetyl/butaryl transferase KFF05_05130 PF03949 Malic enzyme, NAD binding domain KFF05_05130 PF00390 Malic enzyme, N-terminal domain KFF05_05140 PF00892 EamA-like transporter family KFF05_05145 PF07670 Nucleoside recognition KFF05_05160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_05160 PF00205 Thiamine pyrophosphate enzyme, central domain KFF05_05160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF05_05170 PF01738 Dienelactone hydrolase family KFF05_05185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_05185 PF00672 HAMP domain KFF05_05190 PF01613 Flavin reductase like domain KFF05_05200 PF05199 GMC oxidoreductase KFF05_05200 PF00732 GMC oxidoreductase KFF05_05230 PF00549 CoA-ligase KFF05_05230 PF08442 ATP-grasp domain KFF05_05235 PF13607 Succinyl-CoA ligase like flavodoxin domain KFF05_05235 PF13380 CoA binding domain KFF05_05240 PF00378 Enoyl-CoA hydratase/isomerase KFF05_05245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_05245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_05245 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_05255 PF01212 Beta-eliminating lyase KFF05_05280 PF00849 RNA pseudouridylate synthase KFF05_05285 PF00140 Sigma-70 factor, region 1.2 KFF05_05285 PF04542 Sigma-70 region 2 KFF05_05285 PF04545 Sigma-70, region 4 KFF05_05300 PF00709 Adenylosuccinate synthetase KFF05_05305 PF13393 Histidyl-tRNA synthetase KFF05_05320 PF00072 Response regulator receiver domain KFF05_05325 PF00072 Response regulator receiver domain KFF05_05325 PF00990 Diguanylate cyclase, GGDEF domain KFF05_05330 PF00471 Ribosomal protein L33 KFF05_05335 PF13180 PDZ domain KFF05_05335 PF03572 Peptidase family S41 KFF05_05340 PF00575 S1 RNA binding domain KFF05_05340 PF17876 Cold shock domain KFF05_05340 PF08461 Ribonuclease R winged-helix domain KFF05_05340 PF08206 Ribonuclease B OB domain KFF05_05340 PF00773 RNB domain KFF05_05345 PF01396 Topoisomerase DNA binding C4 zinc finger KFF05_05345 PF13368 Topoisomerase C-terminal repeat KFF05_05345 PF01751 Toprim domain KFF05_05345 PF01131 DNA topoisomerase KFF05_05350 PF02481 DNA recombination-mediator protein A KFF05_05355 PF07690 Major Facilitator Superfamily KFF05_05360 PF13533 Biotin-lipoyl like KFF05_05370 PF02660 Glycerol-3-phosphate acyltransferase KFF05_05375 PF01979 Amidohydrolase family KFF05_05380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KFF05_05380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KFF05_05385 PF03652 Holliday junction resolvase KFF05_05400 PF02686 Glu-tRNAGln amidotransferase C subunit KFF05_05405 PF01425 Amidase KFF05_05410 PF02637 GatB domain KFF05_05410 PF02934 GatB/GatE catalytic domain KFF05_05415 PF00583 Acetyltransferase (GNAT) family KFF05_05420 PF00512 His Kinase A (phospho-acceptor) domain KFF05_05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_05435 PF13344 Haloacid dehalogenase-like hydrolase KFF05_05435 PF18407 GCN5-related N-acetyltransferase like domain KFF05_05440 PF07969 Amidohydrolase family KFF05_05450 PF02615 Malate/L-lactate dehydrogenase KFF05_05455 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_05470 PF09339 IclR helix-turn-helix domain KFF05_05470 PF01614 Bacterial transcriptional regulator KFF05_05480 PF04333 MlaA lipoprotein KFF05_05495 PF00043 Glutathione S-transferase, C-terminal domain KFF05_05495 PF02798 Glutathione S-transferase, N-terminal domain KFF05_05500 PF03129 Anticodon binding domain KFF05_05500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KFF05_05500 PF04073 Aminoacyl-tRNA editing domain KFF05_05505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_05505 PF08269 Cache domain KFF05_05515 PF01614 Bacterial transcriptional regulator KFF05_05515 PF09339 IclR helix-turn-helix domain KFF05_05520 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_05535 PF01022 Bacterial regulatory protein, arsR family KFF05_05545 PF12706 Beta-lactamase superfamily domain KFF05_05555 PF07715 TonB-dependent Receptor Plug Domain KFF05_05555 PF00593 TonB dependent receptor KFF05_05565 PF04542 Sigma-70 region 2 KFF05_05565 PF08281 Sigma-70, region 4 KFF05_05570 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF05_05580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF05_05585 PF00892 EamA-like transporter family KFF05_05595 PF02678 Pirin KFF05_05595 PF05726 Pirin C-terminal cupin domain KFF05_05605 PF13181 Tetratricopeptide repeat KFF05_05615 PF00106 short chain dehydrogenase KFF05_05630 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_05650 PF01435 Peptidase family M48 KFF05_05660 PF00155 Aminotransferase class I and II KFF05_05665 PF00575 S1 RNA binding domain KFF05_05665 PF10150 Ribonuclease E/G family KFF05_05665 PF12111 Polyribonucleotide phosphorylase C terminal KFF05_05670 PF01520 N-acetylmuramoyl-L-alanine amidase KFF05_05670 PF11741 AMIN domain KFF05_05675 PF17092 Penicillin-binding protein OB-like domain KFF05_05675 PF00912 Transglycosylase KFF05_05675 PF00905 Penicillin binding protein transpeptidase domain KFF05_05690 PF00578 AhpC/TSA family KFF05_05695 PF08335 GlnD PII-uridylyltransferase KFF05_05695 PF03710 Glutamate-ammonia ligase adenylyltransferase KFF05_05715 PF00579 tRNA synthetases class I (W and Y) KFF05_05720 PF03702 Anhydro-N-acetylmuramic acid kinase KFF05_05725 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KFF05_05730 PF00132 Bacterial transferase hexapeptide (six repeats) KFF05_05735 PF02082 Transcriptional regulator KFF05_05740 PF00266 Aminotransferase class-V KFF05_05745 PF00266 Aminotransferase class-V KFF05_05750 PF01592 NifU-like N terminal domain KFF05_05755 PF01521 Iron-sulphur cluster biosynthesis KFF05_05760 PF07743 HSCB C-terminal oligomerisation domain KFF05_05765 PF00012 Hsp70 protein KFF05_05770 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF05_05775 PF04384 Iron-sulphur cluster assembly KFF05_05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_05780 PF00512 His Kinase A (phospho-acceptor) domain KFF05_05780 PF00989 PAS fold KFF05_05780 PF13188 PAS domain KFF05_05805 PF00005 ABC transporter KFF05_05805 PF00664 ABC transporter transmembrane region KFF05_05810 PF00072 Response regulator receiver domain KFF05_05835 PF00958 GMP synthase C terminal domain KFF05_05835 PF02540 NAD synthase KFF05_05835 PF00117 Glutamine amidotransferase class-I KFF05_05870 PF13667 ThiC-associated domain KFF05_05870 PF01964 Radical SAM ThiC family KFF05_05880 PF00005 ABC transporter KFF05_05885 PF03649 Uncharacterised protein family (UPF0014) KFF05_05890 PF13378 Enolase C-terminal domain-like KFF05_05890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KFF05_05895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_05895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_05925 PF01189 16S rRNA methyltransferase RsmB/F KFF05_05925 PF01029 NusB family KFF05_05955 PF00571 CBS domain KFF05_05955 PF00478 IMP dehydrogenase / GMP reductase domain KFF05_05960 PF01728 FtsJ-like methyltransferase KFF05_05975 PF00072 Response regulator receiver domain KFF05_05975 PF08769 Sporulation initiation factor Spo0A C terminal KFF05_05980 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KFF05_05980 PF01266 FAD dependent oxidoreductase KFF05_05985 PF01546 Peptidase family M20/M25/M40 KFF05_05985 PF07687 Peptidase dimerisation domain KFF05_05990 PF01554 MatE KFF05_06010 PF04143 Sulphur transport KFF05_06020 PF00766 Electron transfer flavoprotein FAD-binding domain KFF05_06020 PF01012 Electron transfer flavoprotein domain KFF05_06025 PF01012 Electron transfer flavoprotein domain KFF05_06030 PF13426 PAS domain KFF05_06030 PF13188 PAS domain KFF05_06030 PF00989 PAS fold KFF05_06030 PF00512 His Kinase A (phospho-acceptor) domain KFF05_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_06045 PF00005 ABC transporter KFF05_06045 PF12704 MacB-like periplasmic core domain KFF05_06055 PF00248 Aldo/keto reductase family KFF05_06070 PF03466 LysR substrate binding domain KFF05_06070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_06075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_06075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_06080 PF00464 Serine hydroxymethyltransferase KFF05_06085 PF03600 Citrate transporter KFF05_06085 PF02080 TrkA-C domain KFF05_06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_06095 PF03466 LysR substrate binding domain KFF05_06115 PF00873 AcrB/AcrD/AcrF family KFF05_06120 PF01066 CDP-alcohol phosphatidyltransferase KFF05_06125 PF02666 Phosphatidylserine decarboxylase KFF05_06150 PF03641 Possible lysine decarboxylase KFF05_06155 PF00180 Isocitrate/isopropylmalate dehydrogenase KFF05_06165 PF00155 Aminotransferase class I and II KFF05_06170 PF00202 Aminotransferase class-III KFF05_06175 PF06968 Biotin and Thiamin Synthesis associated domain KFF05_06175 PF04055 Radical SAM superfamily KFF05_06180 PF00830 Ribosomal L28 family KFF05_06215 PF11775 Cobalamin biosynthesis protein CobT VWA domain KFF05_06215 PF06213 Cobalamin biosynthesis protein CobT KFF05_06220 PF08406 CbbQ/NirQ/NorQ C-terminal KFF05_06220 PF12556 Cobaltochelatase CobS subunit N terminal KFF05_06220 PF07728 AAA domain (dynein-related subfamily) KFF05_06225 PF00226 DnaJ domain KFF05_06240 PF00478 IMP dehydrogenase / GMP reductase domain KFF05_06240 PF00571 CBS domain KFF05_06245 PF03471 Transporter associated domain KFF05_06245 PF00571 CBS domain KFF05_06245 PF01595 Cyclin M transmembrane N-terminal domain KFF05_06250 PF01761 3-dehydroquinate synthase KFF05_06255 PF01202 Shikimate kinase KFF05_06270 PF00589 Phage integrase family KFF05_06270 PF02899 Phage integrase, N-terminal SAM-like domain KFF05_06280 PF01425 Amidase KFF05_06290 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF05_06305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_06305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_06320 PF03328 HpcH/HpaI aldolase/citrate lyase family KFF05_06335 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KFF05_06345 PF07516 SecA Wing and Scaffold domain KFF05_06345 PF01043 SecA preprotein cross-linking domain KFF05_06345 PF07517 SecA DEAD-like domain KFF05_06345 PF02810 SEC-C motif KFF05_06350 PF00639 PPIC-type PPIASE domain KFF05_06355 PF01960 ArgJ family KFF05_06360 PF00293 NUDIX domain KFF05_06380 PF00994 Probable molybdopterin binding domain KFF05_06380 PF18146 Damage-inducible protein CinA KH domain KFF05_06380 PF02464 Competence-damaged protein KFF05_06385 PF00881 Nitroreductase family KFF05_06410 PF00893 Small Multidrug Resistance protein KFF05_06420 PF00027 Cyclic nucleotide-binding domain KFF05_06420 PF13545 Crp-like helix-turn-helix domain KFF05_06425 PF03952 Enolase, N-terminal domain KFF05_06425 PF00113 Enolase, C-terminal TIM barrel domain KFF05_06435 PF01339 CheB methylesterase KFF05_06435 PF00072 Response regulator receiver domain KFF05_06445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_06445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_06445 PF01842 ACT domain KFF05_06450 PF08671 Anti-repressor SinI KFF05_06450 PF01381 Helix-turn-helix KFF05_06460 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_06465 PF00005 ABC transporter KFF05_06465 PF08402 TOBE domain KFF05_06470 PF00596 Class II Aldolase and Adducin N-terminal domain KFF05_06480 PF00989 PAS fold KFF05_06480 PF00512 His Kinase A (phospho-acceptor) domain KFF05_06480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_06495 PF00512 His Kinase A (phospho-acceptor) domain KFF05_06495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_06500 PF08241 Methyltransferase domain KFF05_06505 PF13649 Methyltransferase domain KFF05_06520 PF04204 Homoserine O-succinyltransferase KFF05_06530 PF13247 4Fe-4S dicluster domain KFF05_06535 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 KFF05_06535 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain KFF05_06540 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_06560 PF01926 50S ribosome-binding GTPase KFF05_06560 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KFF05_06585 PF00117 Glutamine amidotransferase class-I KFF05_06600 PF00465 Iron-containing alcohol dehydrogenase KFF05_06610 PF00155 Aminotransferase class I and II KFF05_06620 PF00672 HAMP domain KFF05_06620 PF12729 Four helix bundle sensory module for signal transduction KFF05_06620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_06635 PF00106 short chain dehydrogenase KFF05_06640 PF00156 Phosphoribosyl transferase domain KFF05_06640 PF13537 Glutamine amidotransferase domain KFF05_06650 PF18073 Rubredoxin metal binding domain KFF05_06650 PF06745 KaiC KFF05_06660 PF03328 HpcH/HpaI aldolase/citrate lyase family KFF05_06670 PF00005 ABC transporter KFF05_06675 PF02405 Permease MlaE KFF05_06680 PF00842 Alanine racemase, C-terminal domain KFF05_06680 PF01168 Alanine racemase, N-terminal domain KFF05_06685 PF00772 DnaB-like helicase N terminal domain KFF05_06685 PF03796 DnaB-like helicase C terminal domain KFF05_06695 PF03948 Ribosomal protein L9, C-terminal domain KFF05_06695 PF01281 Ribosomal protein L9, N-terminal domain KFF05_06705 PF01084 Ribosomal protein S18 KFF05_06710 PF01250 Ribosomal protein S6 KFF05_06720 PF00698 Acyl transferase domain KFF05_06730 PF00550 Phosphopantetheine attachment site KFF05_06735 PF02801 Beta-ketoacyl synthase, C-terminal domain KFF05_06735 PF00109 Beta-ketoacyl synthase, N-terminal domain KFF05_06740 PF02618 YceG-like family KFF05_06755 PF00106 short chain dehydrogenase KFF05_06760 PF08340 Domain of unknown function (DUF1732) KFF05_06760 PF03755 YicC-like family, N-terminal region KFF05_06765 PF00625 Guanylate kinase KFF05_06770 PF00398 Ribosomal RNA adenine dimethylase KFF05_06775 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KFF05_06800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_06800 PF12806 Acetyl-CoA dehydrogenase C-terminal like KFF05_06800 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_06800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_06805 PF07969 Amidohydrolase family KFF05_06820 PF01168 Alanine racemase, N-terminal domain KFF05_06820 PF14031 Putative serine dehydratase domain KFF05_06830 PF03883 Peroxide stress protein YaaA KFF05_06835 PF03960 ArsC family KFF05_06850 PF09828 Chromate resistance exported protein KFF05_06865 PF12833 Helix-turn-helix domain KFF05_06865 PF02311 AraC-like ligand binding domain KFF05_06875 PF02548 Ketopantoate hydroxymethyltransferase KFF05_06880 PF01300 Telomere recombination KFF05_06880 PF03481 Putative GTP-binding controlling metal-binding KFF05_06885 PF00459 Inositol monophosphatase family KFF05_06890 PF01875 Memo-like protein KFF05_06905 PF00596 Class II Aldolase and Adducin N-terminal domain KFF05_06910 PF00883 Cytosol aminopeptidase family, catalytic domain KFF05_06910 PF02789 Cytosol aminopeptidase family, N-terminal domain KFF05_06930 PF02515 CoA-transferase family III KFF05_06935 PF03328 HpcH/HpaI aldolase/citrate lyase family KFF05_06940 PF03741 Integral membrane protein TerC family KFF05_06945 PF00732 GMC oxidoreductase KFF05_06945 PF05199 GMC oxidoreductase KFF05_06950 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF05_06960 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF05_06965 PF09339 IclR helix-turn-helix domain KFF05_06965 PF01614 Bacterial transcriptional regulator KFF05_06975 PF12832 MFS_1 like family KFF05_06985 PF00005 ABC transporter KFF05_06985 PF12848 ABC transporter KFF05_06990 PF03466 LysR substrate binding domain KFF05_06990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_06995 PF00334 Nucleoside diphosphate kinase KFF05_07000 PF00551 Formyl transferase KFF05_07005 PF02769 AIR synthase related protein, C-terminal domain KFF05_07005 PF00586 AIR synthase related protein, N-terminal domain KFF05_07015 PF01594 AI-2E family transporter KFF05_07025 PF13439 Glycosyltransferase Family 4 KFF05_07025 PF00534 Glycosyl transferases group 1 KFF05_07035 PF00072 Response regulator receiver domain KFF05_07035 PF00486 Transcriptional regulatory protein, C terminal KFF05_07040 PF00672 HAMP domain KFF05_07040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_07050 PF13090 Polyphosphate kinase C-terminal domain 2 KFF05_07050 PF02503 Polyphosphate kinase middle domain KFF05_07050 PF13089 Polyphosphate kinase N-terminal domain KFF05_07050 PF17941 Polyphosphate kinase C-terminal domain 1 KFF05_07065 PF00570 HRDC domain KFF05_07065 PF01612 3'-5' exonuclease KFF05_07075 PF00378 Enoyl-CoA hydratase/isomerase KFF05_07090 PF01336 OB-fold nucleic acid binding domain KFF05_07090 PF00152 tRNA synthetases class II (D, K and N) KFF05_07090 PF02938 GAD domain KFF05_07110 PF00480 ROK family KFF05_07130 PF00440 Bacterial regulatory proteins, tetR family KFF05_07155 PF01965 DJ-1/PfpI family KFF05_07160 PF01965 DJ-1/PfpI family KFF05_07165 PF05853 beta-keto acid cleavage enzyme KFF05_07170 PF01022 Bacterial regulatory protein, arsR family KFF05_07175 PF00873 AcrB/AcrD/AcrF family KFF05_07180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF05_07185 PF00034 Cytochrome c KFF05_07190 PF00850 Histone deacetylase domain KFF05_07195 PF02609 Exonuclease VII small subunit KFF05_07200 PF00348 Polyprenyl synthetase KFF05_07205 PF02779 Transketolase, pyrimidine binding domain KFF05_07205 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KFF05_07205 PF02780 Transketolase, C-terminal domain KFF05_07210 PF01479 S4 domain KFF05_07210 PF01728 FtsJ-like methyltransferase KFF05_07235 PF13378 Enolase C-terminal domain-like KFF05_07240 PF03466 LysR substrate binding domain KFF05_07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_07245 PF01264 Chorismate synthase KFF05_07255 PF03631 Virulence factor BrkB KFF05_07260 PF00226 DnaJ domain KFF05_07260 PF01556 DnaJ C terminal domain KFF05_07265 PF05433 Glycine zipper 2TM domain KFF05_07265 PF16998 17 kDa outer membrane surface antigen KFF05_07270 PF01243 Pyridoxamine 5'-phosphate oxidase KFF05_07270 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KFF05_07275 PF16916 Dimerisation domain of Zinc Transporter KFF05_07275 PF01545 Cation efflux family KFF05_07290 PF02586 SOS response associated peptidase (SRAP) KFF05_07310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF05_07310 PF14824 Sirohaem biosynthesis protein central KFF05_07310 PF10414 Sirohaem synthase dimerisation region KFF05_07315 PF02628 Cytochrome oxidase assembly protein KFF05_07325 PF03572 Peptidase family S41 KFF05_07325 PF13180 PDZ domain KFF05_07330 PF00009 Elongation factor Tu GTP binding domain KFF05_07335 PF01507 Phosphoadenosine phosphosulfate reductase family KFF05_07340 PF01507 Phosphoadenosine phosphosulfate reductase family KFF05_07345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KFF05_07345 PF00384 Molybdopterin oxidoreductase KFF05_07345 PF01568 Molydopterin dinucleotide binding domain KFF05_07350 PF13247 4Fe-4S dicluster domain KFF05_07350 PF12800 4Fe-4S binding domain KFF05_07355 PF04976 DMSO reductase anchor subunit (DmsC) KFF05_07365 PF00072 Response regulator receiver domain KFF05_07380 PF00009 Elongation factor Tu GTP binding domain KFF05_07380 PF03144 Elongation factor Tu domain 2 KFF05_07380 PF16658 Class II release factor RF3, C-terminal domain KFF05_07405 PF01554 MatE KFF05_07415 PF03485 Arginyl tRNA synthetase N terminal domain KFF05_07415 PF05746 DALR anticodon binding domain KFF05_07415 PF00750 tRNA synthetases class I (R) KFF05_07430 PF00588 SpoU rRNA Methylase family KFF05_07430 PF08032 RNA 2'-O ribose methyltransferase substrate binding KFF05_07455 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KFF05_07460 PF02357 Transcription termination factor nusG KFF05_07460 PF00467 KOW motif KFF05_07465 PF00298 Ribosomal protein L11, RNA binding domain KFF05_07465 PF03946 Ribosomal protein L11, N-terminal domain KFF05_07470 PF00687 Ribosomal protein L1p/L10e family KFF05_07475 PF00466 Ribosomal protein L10 KFF05_07480 PF16320 Ribosomal protein L7/L12 dimerisation domain KFF05_07480 PF00542 Ribosomal protein L7/L12 C-terminal domain KFF05_07485 PF04561 RNA polymerase Rpb2, domain 2 KFF05_07485 PF04565 RNA polymerase Rpb2, domain 3 KFF05_07485 PF04560 RNA polymerase Rpb2, domain 7 KFF05_07485 PF10385 RNA polymerase beta subunit external 1 domain KFF05_07485 PF00562 RNA polymerase Rpb2, domain 6 KFF05_07485 PF04563 RNA polymerase beta subunit KFF05_07490 PF04983 RNA polymerase Rpb1, domain 3 KFF05_07490 PF05000 RNA polymerase Rpb1, domain 4 KFF05_07490 PF04998 RNA polymerase Rpb1, domain 5 KFF05_07490 PF04997 RNA polymerase Rpb1, domain 1 KFF05_07490 PF00623 RNA polymerase Rpb1, domain 2 KFF05_07495 PF00164 Ribosomal protein S12/S23 KFF05_07500 PF00177 Ribosomal protein S7p/S5e KFF05_07505 PF03144 Elongation factor Tu domain 2 KFF05_07505 PF00009 Elongation factor Tu GTP binding domain KFF05_07505 PF03764 Elongation factor G, domain IV KFF05_07505 PF14492 Elongation Factor G, domain II KFF05_07505 PF00679 Elongation factor G C-terminus KFF05_07510 PF00009 Elongation factor Tu GTP binding domain KFF05_07510 PF03144 Elongation factor Tu domain 2 KFF05_07510 PF03143 Elongation factor Tu C-terminal domain KFF05_07515 PF00338 Ribosomal protein S10p/S20e KFF05_07520 PF00297 Ribosomal protein L3 KFF05_07525 PF00573 Ribosomal protein L4/L1 family KFF05_07530 PF00276 Ribosomal protein L23 KFF05_07535 PF00181 Ribosomal Proteins L2, RNA binding domain KFF05_07535 PF03947 Ribosomal Proteins L2, C-terminal domain KFF05_07540 PF00203 Ribosomal protein S19 KFF05_07545 PF00237 Ribosomal protein L22p/L17e KFF05_07550 PF07650 KH domain KFF05_07550 PF00189 Ribosomal protein S3, C-terminal domain KFF05_07555 PF00252 Ribosomal protein L16p/L10e KFF05_07560 PF00831 Ribosomal L29 protein KFF05_07565 PF00366 Ribosomal protein S17 KFF05_07570 PF00238 Ribosomal protein L14p/L23e KFF05_07575 PF00467 KOW motif KFF05_07575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KFF05_07580 PF00281 Ribosomal protein L5 KFF05_07580 PF00673 ribosomal L5P family C-terminus KFF05_07585 PF00253 Ribosomal protein S14p/S29e KFF05_07590 PF00410 Ribosomal protein S8 KFF05_07595 PF00347 Ribosomal protein L6 KFF05_07600 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KFF05_07605 PF03719 Ribosomal protein S5, C-terminal domain KFF05_07605 PF00333 Ribosomal protein S5, N-terminal domain KFF05_07610 PF00327 Ribosomal protein L30p/L7e KFF05_07615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KFF05_07620 PF00344 SecY translocase KFF05_07625 PF05191 Adenylate kinase, active site lid KFF05_07630 PF00416 Ribosomal protein S13/S18 KFF05_07635 PF00411 Ribosomal protein S11 KFF05_07640 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KFF05_07640 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KFF05_07640 PF01000 RNA polymerase Rpb3/RpoA insert domain KFF05_07645 PF01196 Ribosomal protein L17 KFF05_07650 PF00595 PDZ domain KFF05_07655 PF16193 AAA C-terminal domain KFF05_07655 PF12002 MgsA AAA+ ATPase C terminal KFF05_07655 PF00004 ATPase family associated with various cellular activities (AAA) KFF05_07660 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KFF05_07665 PF01479 S4 domain KFF05_07665 PF00849 RNA pseudouridylate synthase KFF05_07670 PF00072 Response regulator receiver domain KFF05_07670 PF00486 Transcriptional regulatory protein, C terminal KFF05_07680 PF00512 His Kinase A (phospho-acceptor) domain KFF05_07680 PF00672 HAMP domain KFF05_07680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_07685 PF00691 OmpA family KFF05_07685 PF01389 OmpA-like transmembrane domain KFF05_07690 PF00691 OmpA family KFF05_07695 PF13419 Haloacid dehalogenase-like hydrolase KFF05_07710 PF00072 Response regulator receiver domain KFF05_07715 PF01039 Carboxyl transferase domain KFF05_07725 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_07730 PF02515 CoA-transferase family III KFF05_07760 PF02525 Flavodoxin-like fold KFF05_07765 PF00795 Carbon-nitrogen hydrolase KFF05_07770 PF00939 Sodium:sulfate symporter transmembrane region KFF05_07780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFF05_07780 PF18140 Propionyl-coenzyme A carboxylase BT domain KFF05_07780 PF02785 Biotin carboxylase C-terminal domain KFF05_07780 PF00364 Biotin-requiring enzyme KFF05_07780 PF00289 Biotin carboxylase, N-terminal domain KFF05_07785 PF00708 Acylphosphatase KFF05_07810 PF03099 Biotin/lipoate A/B protein ligase family KFF05_07820 PF00571 CBS domain KFF05_07820 PF01769 Divalent cation transporter KFF05_07820 PF03448 MgtE intracellular N domain KFF05_07825 PF09278 MerR, DNA binding KFF05_07825 PF00376 MerR family regulatory protein KFF05_07830 PF03447 Homoserine dehydrogenase, NAD binding domain KFF05_07830 PF01958 Domain of unknown function DUF108 KFF05_07850 PF00108 Thiolase, N-terminal domain KFF05_07850 PF02803 Thiolase, C-terminal domain KFF05_07855 PF00106 short chain dehydrogenase KFF05_07860 PF01323 DSBA-like thioredoxin domain KFF05_07870 PF00378 Enoyl-CoA hydratase/isomerase KFF05_07875 PF00072 Response regulator receiver domain KFF05_07895 PF00202 Aminotransferase class-III KFF05_07910 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_07910 PF12911 N-terminal TM domain of oligopeptide transport permease C KFF05_07915 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_07925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KFF05_07930 PF00156 Phosphoribosyl transferase domain KFF05_07935 PF13181 Tetratricopeptide repeat KFF05_07945 PF05721 Phytanoyl-CoA dioxygenase (PhyH) KFF05_07975 PF01557 Fumarylacetoacetate (FAA) hydrolase family KFF05_08005 PF00873 AcrB/AcrD/AcrF family KFF05_08010 PF13533 Biotin-lipoyl like KFF05_08035 PF13629 Pilus formation protein N terminal region KFF05_08035 PF04972 BON domain KFF05_08035 PF00263 Bacterial type II and III secretion system protein KFF05_08050 PF00437 Type II/IV secretion system protein KFF05_08070 PF12802 MarR family KFF05_08080 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_08080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_08080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_08095 PF12146 Serine aminopeptidase, S33 KFF05_08110 PF13458 Periplasmic binding protein KFF05_08115 PF02653 Branched-chain amino acid transport system / permease component KFF05_08125 PF00005 ABC transporter KFF05_08125 PF12399 Branched-chain amino acid ATP-binding cassette transporter KFF05_08130 PF00005 ABC transporter KFF05_08140 PF00920 Dehydratase family KFF05_08150 PF14403 Circularly permuted ATP-grasp type 2 KFF05_08160 PF01841 Transglutaminase-like superfamily KFF05_08160 PF08379 Bacterial transglutaminase-like N-terminal region KFF05_08165 PF00361 Proton-conducting membrane transporter KFF05_08175 PF00361 Proton-conducting membrane transporter KFF05_08180 PF00361 Proton-conducting membrane transporter KFF05_08185 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KFF05_08205 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KFF05_08210 PF01899 Na+/H+ ion antiporter subunit KFF05_08255 PF01625 Peptide methionine sulfoxide reductase KFF05_08280 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KFF05_08280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF05_08285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF05_08285 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KFF05_08290 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF05_08300 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF05_08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_08310 PF03466 LysR substrate binding domain KFF05_08315 PF00990 Diguanylate cyclase, GGDEF domain KFF05_08315 PF00072 Response regulator receiver domain KFF05_08320 PF01914 MarC family integral membrane protein KFF05_08325 PF02492 CobW/HypB/UreG, nucleotide-binding domain KFF05_08325 PF07683 Cobalamin synthesis protein cobW C-terminal domain KFF05_08330 PF01502 Phosphoribosyl-AMP cyclohydrolase KFF05_08335 PF01053 Cys/Met metabolism PLP-dependent enzyme KFF05_08340 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFF05_08345 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_08350 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_08355 PF00005 ABC transporter KFF05_08370 PF00581 Rhodanese-like domain KFF05_08375 PF00571 CBS domain KFF05_08375 PF00291 Pyridoxal-phosphate dependent enzyme KFF05_08380 PF00378 Enoyl-CoA hydratase/isomerase KFF05_08385 PF00293 NUDIX domain KFF05_08400 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KFF05_08400 PF03625 Domain of unknown function DUF302 KFF05_08405 PF00989 PAS fold KFF05_08405 PF00512 His Kinase A (phospho-acceptor) domain KFF05_08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_08410 PF03853 YjeF-related protein N-terminus KFF05_08410 PF01256 Carbohydrate kinase KFF05_08425 PF05698 Bacterial trigger factor protein (TF) C-terminus KFF05_08425 PF05697 Bacterial trigger factor protein (TF) KFF05_08425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFF05_08430 PF00574 Clp protease KFF05_08435 PF07724 AAA domain (Cdc48 subfamily) KFF05_08435 PF10431 C-terminal, D2-small domain, of ClpB protein KFF05_08435 PF06689 ClpX C4-type zinc finger KFF05_08440 PF02190 ATP-dependent protease La (LON) substrate-binding domain KFF05_08440 PF05362 Lon protease (S16) C-terminal proteolytic domain KFF05_08440 PF00004 ATPase family associated with various cellular activities (AAA) KFF05_08445 PF00216 Bacterial DNA-binding protein KFF05_08460 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KFF05_08465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KFF05_08470 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KFF05_08475 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KFF05_08485 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KFF05_08485 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KFF05_08485 PF10531 SLBB domain KFF05_08490 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KFF05_08490 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KFF05_08490 PF00384 Molybdopterin oxidoreductase KFF05_08495 PF00146 NADH dehydrogenase KFF05_08500 PF12838 4Fe-4S dicluster domain KFF05_08505 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KFF05_08510 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KFF05_08515 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KFF05_08515 PF00361 Proton-conducting membrane transporter KFF05_08520 PF00361 Proton-conducting membrane transporter KFF05_08520 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus KFF05_08525 PF00361 Proton-conducting membrane transporter KFF05_08530 PF02237 Biotin protein ligase C terminal domain KFF05_08530 PF03099 Biotin/lipoate A/B protein ligase family KFF05_08535 PF03309 Type III pantothenate kinase KFF05_08540 PF12706 Beta-lactamase superfamily domain KFF05_08540 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KFF05_08540 PF17770 Ribonuclease J C-terminal domain KFF05_08555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KFF05_08555 PF03129 Anticodon binding domain KFF05_08560 PF02687 FtsX-like permease family KFF05_08560 PF12704 MacB-like periplasmic core domain KFF05_08565 PF00005 ABC transporter KFF05_08585 PF04542 Sigma-70 region 2 KFF05_08585 PF08281 Sigma-70, region 4 KFF05_08585 PF12680 SnoaL-like domain KFF05_08590 PF02627 Carboxymuconolactone decarboxylase family KFF05_08610 PF02979 Nitrile hydratase, alpha chain KFF05_08615 PF14579 Helix-hairpin-helix motif KFF05_08615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KFF05_08615 PF07733 Bacterial DNA polymerase III alpha NTPase domain KFF05_08615 PF02811 PHP domain KFF05_08620 PF00318 Ribosomal protein S2 KFF05_08625 PF00889 Elongation factor TS KFF05_08630 PF00696 Amino acid kinase family KFF05_08635 PF01765 Ribosome recycling factor KFF05_08640 PF01255 Putative undecaprenyl diphosphate synthase KFF05_08650 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KFF05_08650 PF13288 DXP reductoisomerase C-terminal domain KFF05_08650 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KFF05_08655 PF17820 PDZ domain KFF05_08655 PF02163 Peptidase family M50 KFF05_08660 PF01103 Surface antigen KFF05_08660 PF07244 Surface antigen variable number repeat KFF05_08670 PF00132 Bacterial transferase hexapeptide (six repeats) KFF05_08670 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KFF05_08675 PF07977 FabA-like domain KFF05_08680 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KFF05_08680 PF00132 Bacterial transferase hexapeptide (six repeats) KFF05_08690 PF02684 Lipid-A-disaccharide synthetase KFF05_08695 PF00285 Citrate synthase, C-terminal domain KFF05_08700 PF00749 tRNA synthetases class I (E and Q), catalytic domain KFF05_08705 PF13567 Domain of unknown function (DUF4131) KFF05_08705 PF00753 Metallo-beta-lactamase superfamily KFF05_08705 PF03772 Competence protein KFF05_08710 PF01726 LexA DNA binding domain KFF05_08710 PF00717 Peptidase S24-like KFF05_08715 PF00994 Probable molybdopterin binding domain KFF05_08715 PF03454 MoeA C-terminal region (domain IV) KFF05_08715 PF03453 MoeA N-terminal region (domain I and II) KFF05_08720 PF01967 MoaC family KFF05_08725 PF00218 Indole-3-glycerol phosphate synthase KFF05_08730 PF00591 Glycosyl transferase family, a/b domain KFF05_08730 PF02885 Glycosyl transferase family, helical bundle domain KFF05_08735 PF00117 Glutamine amidotransferase class-I KFF05_08745 PF00425 chorismate binding enzyme KFF05_08745 PF04715 Anthranilate synthase component I, N terminal region KFF05_08750 PF13145 PPIC-type PPIASE domain KFF05_08755 PF00121 Triosephosphate isomerase KFF05_08760 PF03840 Preprotein translocase SecG subunit KFF05_08765 PF06418 CTP synthase N-terminus KFF05_08765 PF00117 Glutamine amidotransferase class-I KFF05_08770 PF00793 DAHP synthetase I family KFF05_08775 PF00113 Enolase, C-terminal TIM barrel domain KFF05_08775 PF03952 Enolase, N-terminal domain KFF05_08795 PF00676 Dehydrogenase E1 component KFF05_08800 PF02779 Transketolase, pyrimidine binding domain KFF05_08800 PF02780 Transketolase, C-terminal domain KFF05_08800 PF00364 Biotin-requiring enzyme KFF05_08805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KFF05_08805 PF00364 Biotin-requiring enzyme KFF05_08805 PF02817 e3 binding domain KFF05_08810 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_08810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KFF05_08815 PF04055 Radical SAM superfamily KFF05_08815 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KFF05_08820 PF03364 Polyketide cyclase / dehydrase and lipid transport KFF05_08825 PF02464 Competence-damaged protein KFF05_08830 PF04608 Phosphatidylglycerophosphatase A KFF05_08835 PF01551 Peptidase family M23 KFF05_08845 PF00291 Pyridoxal-phosphate dependent enzyme KFF05_08850 PF12697 Alpha/beta hydrolase family KFF05_08865 PF00701 Dihydrodipicolinate synthetase family KFF05_08870 PF01668 SmpB protein KFF05_08875 PF00174 Oxidoreductase molybdopterin binding domain KFF05_08880 PF00970 Oxidoreductase FAD-binding domain KFF05_08880 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF05_08880 PF00175 Oxidoreductase NAD-binding domain KFF05_08885 PF00043 Glutathione S-transferase, C-terminal domain KFF05_08885 PF02798 Glutathione S-transferase, N-terminal domain KFF05_08900 PF03167 Uracil DNA glycosylase superfamily KFF05_08915 PF01192 RNA polymerase Rpb6 KFF05_08920 PF13291 ACT domain KFF05_08920 PF04607 Region found in RelA / SpoT proteins KFF05_08920 PF02824 TGS domain KFF05_08925 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KFF05_08930 PF01648 4'-phosphopantetheinyl transferase superfamily KFF05_08935 PF10502 Signal peptidase, peptidase S26 KFF05_08940 PF14622 Ribonuclease-III-like KFF05_08940 PF00035 Double-stranded RNA binding motif KFF05_08945 PF01926 50S ribosome-binding GTPase KFF05_08945 PF07650 KH domain KFF05_08950 PF02565 Recombination protein O C terminal KFF05_08950 PF11967 Recombination protein O N terminal KFF05_08955 PF03989 DNA gyrase C-terminal domain, beta-propeller KFF05_08955 PF00521 DNA gyrase/topoisomerase IV, subunit A KFF05_08960 PF04376 Arginine-tRNA-protein transferase, N terminus KFF05_08960 PF04377 Arginine-tRNA-protein transferase, C terminus KFF05_08965 PF13677 Membrane MotB of proton-channel complex MotA/MotB KFF05_08965 PF00691 OmpA family KFF05_08970 PF01618 MotA/TolQ/ExbB proton channel family KFF05_08975 PF01613 Flavin reductase like domain KFF05_08985 PF13291 ACT domain KFF05_08985 PF00291 Pyridoxal-phosphate dependent enzyme KFF05_08990 PF01804 Penicillin amidase KFF05_08995 PF02515 CoA-transferase family III KFF05_09000 PF00561 alpha/beta hydrolase fold KFF05_09005 PF01584 CheW-like domain KFF05_09010 PF00490 Delta-aminolevulinic acid dehydratase KFF05_09025 PF02502 Ribose/Galactose Isomerase KFF05_09030 PF00464 Serine hydroxymethyltransferase KFF05_09035 PF03477 ATP cone domain KFF05_09040 PF01872 RibD C-terminal domain KFF05_09040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KFF05_09045 PF00677 Lumazine binding domain KFF05_09050 PF00925 GTP cyclohydrolase II KFF05_09050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KFF05_09055 PF00885 6,7-dimethyl-8-ribityllumazine synthase KFF05_09060 PF01029 NusB family KFF05_09065 PF00586 AIR synthase related protein, N-terminal domain KFF05_09065 PF02769 AIR synthase related protein, C-terminal domain KFF05_09075 PF03030 Inorganic H+ pyrophosphatase KFF05_09095 PF01783 Ribosomal L32p protein family KFF05_09100 PF02504 Fatty acid synthesis protein KFF05_09105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KFF05_09105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KFF05_09110 PF00216 Bacterial DNA-binding protein KFF05_09115 PF13411 MerR HTH family regulatory protein KFF05_09155 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KFF05_09155 PF02542 YgbB family KFF05_09160 PF01578 Cytochrome C assembly protein KFF05_09165 PF01207 Dihydrouridine synthase (Dus) KFF05_09170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_09170 PF00512 His Kinase A (phospho-acceptor) domain KFF05_09170 PF00989 PAS fold KFF05_09175 PF00158 Sigma-54 interaction domain KFF05_09175 PF00072 Response regulator receiver domain KFF05_09175 PF02954 Bacterial regulatory protein, Fis family KFF05_09180 PF00672 HAMP domain KFF05_09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_09185 PF00072 Response regulator receiver domain KFF05_09185 PF00158 Sigma-54 interaction domain KFF05_09185 PF02954 Bacterial regulatory protein, Fis family KFF05_09190 PF02254 TrkA-N domain KFF05_09190 PF02080 TrkA-C domain KFF05_09200 PF17209 Hfq protein KFF05_09205 PF13167 GTP-binding GTPase N-terminal KFF05_09205 PF16360 GTP-binding GTPase Middle Region KFF05_09205 PF01926 50S ribosome-binding GTPase KFF05_09215 PF00459 Inositol monophosphatase family KFF05_09220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KFF05_09220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KFF05_09235 PF03819 MazG nucleotide pyrophosphohydrolase domain KFF05_09245 PF00202 Aminotransferase class-III KFF05_09260 PF03466 LysR substrate binding domain KFF05_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_09270 PF03099 Biotin/lipoate A/B protein ligase family KFF05_09270 PF12706 Beta-lactamase superfamily domain KFF05_09275 PF01026 TatD related DNase KFF05_09280 PF09334 tRNA synthetases class I (M) KFF05_09285 PF09115 DNA polymerase III, delta subunit, C terminal KFF05_09290 PF02223 Thymidylate kinase KFF05_09295 PF07943 Penicillin-binding protein 5, C-terminal domain KFF05_09295 PF00768 D-alanyl-D-alanine carboxypeptidase KFF05_09300 PF03330 Lytic transglycolase KFF05_09300 PF05036 Sporulation related domain KFF05_09305 PF13406 Transglycosylase SLT domain KFF05_09310 PF02698 DUF218 domain KFF05_09325 PF00589 Phage integrase family KFF05_09340 PF18766 SWI2/SNF2 ATPase KFF05_09340 PF11867 Domain of unknown function (DUF3387) KFF05_09340 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KFF05_09345 PF03793 PASTA domain KFF05_09345 PF00069 Protein kinase domain KFF05_09365 PF12161 HsdM N-terminal domain KFF05_09365 PF02384 N-6 DNA Methylase KFF05_09390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_09390 PF08447 PAS fold KFF05_09390 PF08448 PAS fold KFF05_09395 PF01339 CheB methylesterase KFF05_09395 PF00072 Response regulator receiver domain KFF05_09400 PF00072 Response regulator receiver domain KFF05_09400 PF01584 CheW-like domain KFF05_09400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_09400 PF01627 Hpt domain KFF05_09405 PF02743 Cache domain KFF05_09405 PF00672 HAMP domain KFF05_09405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_09415 PF01739 CheR methyltransferase, SAM binding domain KFF05_09415 PF03705 CheR methyltransferase, all-alpha domain KFF05_09425 PF00072 Response regulator receiver domain KFF05_09425 PF00486 Transcriptional regulatory protein, C terminal KFF05_09430 PF00563 EAL domain KFF05_09430 PF01590 GAF domain KFF05_09430 PF00990 Diguanylate cyclase, GGDEF domain KFF05_09430 PF00360 Phytochrome region KFF05_09435 PF00072 Response regulator receiver domain KFF05_09440 PF00072 Response regulator receiver domain KFF05_09440 PF13426 PAS domain KFF05_09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_09445 PF00196 Bacterial regulatory proteins, luxR family KFF05_09445 PF00072 Response regulator receiver domain KFF05_09450 PF00072 Response regulator receiver domain KFF05_09455 PF00672 HAMP domain KFF05_09455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_09470 PF07715 TonB-dependent Receptor Plug Domain KFF05_09470 PF00593 TonB dependent receptor KFF05_09480 PF01032 FecCD transport family KFF05_09485 PF00005 ABC transporter KFF05_09510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KFF05_09510 PF13378 Enolase C-terminal domain-like KFF05_09525 PF08546 Ketopantoate reductase PanE/ApbA C terminal KFF05_09525 PF02558 Ketopantoate reductase PanE/ApbA KFF05_09530 PF07729 FCD domain KFF05_09530 PF00392 Bacterial regulatory proteins, gntR family KFF05_09535 PF01227 GTP cyclohydrolase I KFF05_09540 PF04324 BFD-like [2Fe-2S] binding domain KFF05_09540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KFF05_09540 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_09540 PF18267 Rubredoxin NAD+ reductase C-terminal domain KFF05_09560 PF03958 Bacterial type II/III secretion system short domain KFF05_09560 PF00263 Bacterial type II and III secretion system protein KFF05_09575 PF00005 ABC transporter KFF05_09580 PF12399 Branched-chain amino acid ATP-binding cassette transporter KFF05_09580 PF00005 ABC transporter KFF05_09590 PF02653 Branched-chain amino acid transport system / permease component KFF05_09600 PF01381 Helix-turn-helix KFF05_09600 PF06114 IrrE N-terminal-like domain KFF05_09600 PF09856 Predicted transcriptional regulator (DUF2083) KFF05_09605 PF00486 Transcriptional regulatory protein, C terminal KFF05_09605 PF00072 Response regulator receiver domain KFF05_09615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_09615 PF00672 HAMP domain KFF05_09615 PF00989 PAS fold KFF05_09615 PF18698 Histidine kinase sensor domain KFF05_09615 PF00512 His Kinase A (phospho-acceptor) domain KFF05_09620 PF01970 Tripartite tricarboxylate transporter TctA family KFF05_09635 PF07729 FCD domain KFF05_09635 PF00392 Bacterial regulatory proteins, gntR family KFF05_09640 PF02515 CoA-transferase family III KFF05_09645 PF00378 Enoyl-CoA hydratase/isomerase KFF05_09675 PF02559 CarD-like/TRCF domain KFF05_09675 PF00270 DEAD/DEAH box helicase KFF05_09675 PF00271 Helicase conserved C-terminal domain KFF05_09675 PF03461 TRCF domain KFF05_09675 PF17757 UvrB interaction domain KFF05_09685 PF00270 DEAD/DEAH box helicase KFF05_09685 PF17191 RecG wedge domain KFF05_09685 PF00271 Helicase conserved C-terminal domain KFF05_09695 PF00561 alpha/beta hydrolase fold KFF05_09705 PF00293 NUDIX domain KFF05_09705 PF01467 Cytidylyltransferase-like KFF05_09710 PF00529 HlyD membrane-fusion protein of T1SS KFF05_09715 PF00664 ABC transporter transmembrane region KFF05_09715 PF00005 ABC transporter KFF05_09720 PF00664 ABC transporter transmembrane region KFF05_09720 PF00005 ABC transporter KFF05_09735 PF14842 FliG N-terminal domain KFF05_09735 PF01706 FliG C-terminal domain KFF05_09735 PF14841 FliG middle domain KFF05_09745 PF01206 Sulfurtransferase TusA KFF05_09750 PF01925 Sulfite exporter TauE/SafE KFF05_09755 PF01925 Sulfite exporter TauE/SafE KFF05_09770 PF13417 Glutathione S-transferase, N-terminal domain KFF05_09775 PF00392 Bacterial regulatory proteins, gntR family KFF05_09775 PF07729 FCD domain KFF05_09780 PF00596 Class II Aldolase and Adducin N-terminal domain KFF05_09785 PF00834 Ribulose-phosphate 3 epimerase family KFF05_09790 PF00274 Fructose-bisphosphate aldolase class-I KFF05_09795 PF02780 Transketolase, C-terminal domain KFF05_09795 PF00456 Transketolase, thiamine diphosphate binding domain KFF05_09795 PF02779 Transketolase, pyrimidine binding domain KFF05_09800 PF01722 BolA-like protein KFF05_09805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF05_09805 PF00529 HlyD membrane-fusion protein of T1SS KFF05_09810 PF00873 AcrB/AcrD/AcrF family KFF05_09820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KFF05_09820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KFF05_09830 PF01726 LexA DNA binding domain KFF05_09830 PF00717 Peptidase S24-like KFF05_09835 PF11799 impB/mucB/samB family C-terminal domain KFF05_09835 PF00817 impB/mucB/samB family KFF05_09835 PF13438 Domain of unknown function (DUF4113) KFF05_09850 PF00155 Aminotransferase class I and II KFF05_09855 PF00543 Nitrogen regulatory protein P-II KFF05_09860 PF03951 Glutamine synthetase, beta-Grasp domain KFF05_09860 PF00120 Glutamine synthetase, catalytic domain KFF05_09865 PF17850 CysA C-terminal regulatory domain KFF05_09865 PF12857 TOBE-like domain KFF05_09865 PF00005 ABC transporter KFF05_09870 PF00248 Aldo/keto reductase family KFF05_09875 PF02080 TrkA-C domain KFF05_09875 PF00999 Sodium/hydrogen exchanger family KFF05_09875 PF03471 Transporter associated domain KFF05_09880 PF00999 Sodium/hydrogen exchanger family KFF05_09880 PF02254 TrkA-N domain KFF05_09890 PF12729 Four helix bundle sensory module for signal transduction KFF05_09890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_09890 PF00672 HAMP domain KFF05_09900 PF03061 Thioesterase superfamily KFF05_09905 PF00204 DNA gyrase B KFF05_09905 PF00986 DNA gyrase B subunit, carboxyl terminus KFF05_09905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_09905 PF01751 Toprim domain KFF05_09910 PF01118 Semialdehyde dehydrogenase, NAD binding domain KFF05_09915 PF00561 alpha/beta hydrolase fold KFF05_09925 PF00380 Ribosomal protein S9/S16 KFF05_09930 PF00572 Ribosomal protein L13 KFF05_09940 PF00378 Enoyl-CoA hydratase/isomerase KFF05_09950 PF01053 Cys/Met metabolism PLP-dependent enzyme KFF05_09955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KFF05_09985 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KFF05_10000 PF01368 DHH family KFF05_10000 PF02272 DHHA1 domain KFF05_10000 PF17768 RecJ OB domain KFF05_10005 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KFF05_10010 PF01842 ACT domain KFF05_10010 PF00742 Homoserine dehydrogenase KFF05_10010 PF03447 Homoserine dehydrogenase, NAD binding domain KFF05_10015 PF00155 Aminotransferase class I and II KFF05_10025 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus KFF05_10025 PF00561 alpha/beta hydrolase fold KFF05_10030 PF00155 Aminotransferase class I and II KFF05_10030 PF00392 Bacterial regulatory proteins, gntR family KFF05_10050 PF00101 Ribulose bisphosphate carboxylase, small chain KFF05_10050 PF00132 Bacterial transferase hexapeptide (six repeats) KFF05_10055 PF00857 Isochorismatase family KFF05_10055 PF00550 Phosphopantetheine attachment site KFF05_10065 PF00270 DEAD/DEAH box helicase KFF05_10065 PF00271 Helicase conserved C-terminal domain KFF05_10075 PF05690 Thiazole biosynthesis protein ThiG KFF05_10075 PF02597 ThiS family KFF05_10080 PF01220 Dehydroquinase class II KFF05_10085 PF00364 Biotin-requiring enzyme KFF05_10090 PF02785 Biotin carboxylase C-terminal domain KFF05_10090 PF00289 Biotin carboxylase, N-terminal domain KFF05_10090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFF05_10095 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KFF05_10120 PF08471 Class II vitamin B12-dependent ribonucleotide reductase KFF05_10120 PF02867 Ribonucleotide reductase, barrel domain KFF05_10125 PF00072 Response regulator receiver domain KFF05_10125 PF00486 Transcriptional regulatory protein, C terminal KFF05_10165 PF02515 CoA-transferase family III KFF05_10170 PF17871 AAA lid domain KFF05_10170 PF00004 ATPase family associated with various cellular activities (AAA) KFF05_10170 PF02861 Clp amino terminal domain, pathogenicity island component KFF05_10170 PF07724 AAA domain (Cdc48 subfamily) KFF05_10170 PF10431 C-terminal, D2-small domain, of ClpB protein KFF05_10175 PF02617 ATP-dependent Clp protease adaptor protein ClpS KFF05_10185 PF07943 Penicillin-binding protein 5, C-terminal domain KFF05_10185 PF00768 D-alanyl-D-alanine carboxypeptidase KFF05_10190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KFF05_10190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KFF05_10190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KFF05_10190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KFF05_10195 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KFF05_10195 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KFF05_10195 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KFF05_10200 PF00483 Nucleotidyl transferase KFF05_10215 PF00376 MerR family regulatory protein KFF05_10215 PF13614 AAA domain KFF05_10220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KFF05_10220 PF00384 Molybdopterin oxidoreductase KFF05_10220 PF01568 Molydopterin dinucleotide binding domain KFF05_10225 PF03537 Glycoside-hydrolase family GH114 KFF05_10230 PF00501 AMP-binding enzyme KFF05_10230 PF13193 AMP-binding enzyme C-terminal domain KFF05_10240 PF01323 DSBA-like thioredoxin domain KFF05_10250 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KFF05_10270 PF02797 Chalcone and stilbene synthases, C-terminal domain KFF05_10270 PF00195 Chalcone and stilbene synthases, N-terminal domain KFF05_10275 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family KFF05_10290 PF03737 Aldolase/RraA KFF05_10295 PF00920 Dehydratase family KFF05_10305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF05_10310 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF05_10315 PF07729 FCD domain KFF05_10315 PF00392 Bacterial regulatory proteins, gntR family KFF05_10320 PF05721 Phytanoyl-CoA dioxygenase (PhyH) KFF05_10325 PF01842 ACT domain KFF05_10325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_10325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_10345 PF03466 LysR substrate binding domain KFF05_10350 PF00795 Carbon-nitrogen hydrolase KFF05_10355 PF13458 Periplasmic binding protein KFF05_10360 PF00005 ABC transporter KFF05_10365 PF00005 ABC transporter KFF05_10365 PF12399 Branched-chain amino acid ATP-binding cassette transporter KFF05_10370 PF02653 Branched-chain amino acid transport system / permease component KFF05_10370 PF11862 Domain of unknown function (DUF3382) KFF05_10375 PF02653 Branched-chain amino acid transport system / permease component KFF05_10390 PF01467 Cytidylyltransferase-like KFF05_10395 PF03989 DNA gyrase C-terminal domain, beta-propeller KFF05_10395 PF00521 DNA gyrase/topoisomerase IV, subunit A KFF05_10400 PF00989 PAS fold KFF05_10400 PF00512 His Kinase A (phospho-acceptor) domain KFF05_10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_10405 PF00436 Single-strand binding protein family KFF05_10415 PF17755 UvrA DNA-binding domain KFF05_10415 PF17760 UvrA interaction domain KFF05_10430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF05_10440 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF05_10470 PF02515 CoA-transferase family III KFF05_10475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_10475 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_10475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_10505 PF01134 Glucose inhibited division protein A KFF05_10530 PF04430 Protein of unknown function (DUF498/DUF598) KFF05_10535 PF07549 SecD/SecF GG Motif KFF05_10535 PF02355 Protein export membrane protein KFF05_10540 PF02355 Protein export membrane protein KFF05_10545 PF02699 Preprotein translocase subunit KFF05_10560 PF01476 LysM domain KFF05_10560 PF01551 Peptidase family M23 KFF05_10570 PF01975 Survival protein SurE KFF05_10575 PF02403 Seryl-tRNA synthetase N-terminal domain KFF05_10575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KFF05_10580 PF00902 Sec-independent protein translocase protein (TatC) KFF05_10585 PF02416 mttA/Hcf106 family KFF05_10590 PF02416 mttA/Hcf106 family KFF05_10595 PF04079 Segregation and condensation complex subunit ScpB KFF05_10600 PF02616 Segregation and condensation protein ScpA KFF05_10605 PF02163 Peptidase family M50 KFF05_10610 PF00933 Glycosyl hydrolase family 3 N terminal domain KFF05_10620 PF01966 HD domain KFF05_10620 PF13286 Phosphohydrolase-associated domain KFF05_10630 PF01521 Iron-sulphur cluster biosynthesis KFF05_10645 PF13673 Acetyltransferase (GNAT) domain KFF05_10645 PF13302 Acetyltransferase (GNAT) domain KFF05_10645 PF03352 Methyladenine glycosylase KFF05_10645 PF00117 Glutamine amidotransferase class-I KFF05_10645 PF00958 GMP synthase C terminal domain KFF05_10650 PF12706 Beta-lactamase superfamily domain KFF05_10655 PF01435 Peptidase family M48 KFF05_10665 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_10690 PF00107 Zinc-binding dehydrogenase KFF05_10690 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_10695 PF01717 Cobalamin-independent synthase, Catalytic domain KFF05_10695 PF08267 Cobalamin-independent synthase, N-terminal domain KFF05_10700 PF00920 Dehydratase family KFF05_10710 PF00266 Aminotransferase class-V KFF05_10725 PF00924 Mechanosensitive ion channel KFF05_10725 PF05552 Conserved TM helix KFF05_10730 PF08264 Anticodon-binding domain of tRNA KFF05_10730 PF00133 tRNA synthetases class I (I, L, M and V) KFF05_10730 PF10458 Valyl tRNA synthetase tRNA binding arm KFF05_10740 PF02321 Outer membrane efflux protein KFF05_10765 PF00072 Response regulator receiver domain KFF05_10770 PF01740 STAS domain KFF05_10785 PF11799 impB/mucB/samB family C-terminal domain KFF05_10785 PF00817 impB/mucB/samB family KFF05_10795 PF00211 Adenylate and Guanylate cyclase catalytic domain KFF05_10800 PF13607 Succinyl-CoA ligase like flavodoxin domain KFF05_10800 PF13380 CoA binding domain KFF05_10800 PF00583 Acetyltransferase (GNAT) family KFF05_10805 PF00072 Response regulator receiver domain KFF05_10805 PF00211 Adenylate and Guanylate cyclase catalytic domain KFF05_10815 PF00529 HlyD membrane-fusion protein of T1SS KFF05_10820 PF01618 MotA/TolQ/ExbB proton channel family KFF05_10825 PF13677 Membrane MotB of proton-channel complex MotA/MotB KFF05_10825 PF00691 OmpA family KFF05_10830 PF12706 Beta-lactamase superfamily domain KFF05_10840 PF00140 Sigma-70 factor, region 1.2 KFF05_10840 PF04542 Sigma-70 region 2 KFF05_10840 PF04545 Sigma-70, region 4 KFF05_10875 PF05721 Phytanoyl-CoA dioxygenase (PhyH) KFF05_10880 PF00132 Bacterial transferase hexapeptide (six repeats) KFF05_10880 PF12804 MobA-like NTP transferase domain KFF05_10885 PF01370 NAD dependent epimerase/dehydratase family KFF05_10890 PF02401 LytB protein KFF05_10895 PF04055 Radical SAM superfamily KFF05_10895 PF06463 Molybdenum Cofactor Synthesis C KFF05_10910 PF01593 Flavin containing amine oxidoreductase KFF05_10940 PF01266 FAD dependent oxidoreductase KFF05_10945 PF02913 FAD linked oxidases, C-terminal domain KFF05_10945 PF01565 FAD binding domain KFF05_10965 PF02615 Malate/L-lactate dehydrogenase KFF05_10970 PF02615 Malate/L-lactate dehydrogenase KFF05_10975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_10975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_10990 PF07702 UTRA domain KFF05_10990 PF00392 Bacterial regulatory proteins, gntR family KFF05_10995 PF13545 Crp-like helix-turn-helix domain KFF05_10995 PF00027 Cyclic nucleotide-binding domain KFF05_11015 PF00171 Aldehyde dehydrogenase family KFF05_11020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_11020 PF00512 His Kinase A (phospho-acceptor) domain KFF05_11030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF05_11030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_11055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_11055 PF00072 Response regulator receiver domain KFF05_11065 PF00158 Sigma-54 interaction domain KFF05_11065 PF02954 Bacterial regulatory protein, Fis family KFF05_11065 PF00072 Response regulator receiver domain KFF05_11075 PF00043 Glutathione S-transferase, C-terminal domain KFF05_11075 PF13417 Glutathione S-transferase, N-terminal domain KFF05_11105 PF07690 Major Facilitator Superfamily KFF05_11110 PF00378 Enoyl-CoA hydratase/isomerase KFF05_11135 PF02615 Malate/L-lactate dehydrogenase KFF05_11140 PF03062 MBOAT, membrane-bound O-acyltransferase family KFF05_11150 PF02558 Ketopantoate reductase PanE/ApbA KFF05_11150 PF08546 Ketopantoate reductase PanE/ApbA C terminal KFF05_11155 PF00180 Isocitrate/isopropylmalate dehydrogenase KFF05_11160 PF00581 Rhodanese-like domain KFF05_11165 PF00694 Aconitase C-terminal domain KFF05_11170 PF00330 Aconitase family (aconitate hydratase) KFF05_11175 PF02515 CoA-transferase family III KFF05_11180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_11180 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_11180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_11195 PF03972 MmgE/PrpD family KFF05_11200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_11200 PF03466 LysR substrate binding domain KFF05_11205 PF03793 PASTA domain KFF05_11205 PF00069 Protein kinase domain KFF05_11215 PF01261 Xylose isomerase-like TIM barrel KFF05_11220 PF00543 Nitrogen regulatory protein P-II KFF05_11225 PF00909 Ammonium Transporter Family KFF05_11230 PF00378 Enoyl-CoA hydratase/isomerase KFF05_11235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_11235 PF01842 ACT domain KFF05_11235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_11240 PF00990 Diguanylate cyclase, GGDEF domain KFF05_11270 PF00378 Enoyl-CoA hydratase/isomerase KFF05_11275 PF04909 Amidohydrolase KFF05_11280 PF03737 Aldolase/RraA KFF05_11290 PF03328 HpcH/HpaI aldolase/citrate lyase family KFF05_11300 PF12911 N-terminal TM domain of oligopeptide transport permease C KFF05_11300 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_11305 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_11310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KFF05_11315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KFF05_11315 PF00005 ABC transporter KFF05_11320 PF00005 ABC transporter KFF05_11320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KFF05_11330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KFF05_11330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KFF05_11335 PF01070 FMN-dependent dehydrogenase KFF05_11340 PF03737 Aldolase/RraA KFF05_11345 PF03992 Antibiotic biosynthesis monooxygenase KFF05_11350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_11350 PF08269 Cache domain KFF05_11360 PF07690 Major Facilitator Superfamily KFF05_11375 PF01042 Endoribonuclease L-PSP KFF05_11380 PF13607 Succinyl-CoA ligase like flavodoxin domain KFF05_11380 PF13380 CoA binding domain KFF05_11385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_11385 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_11385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_11390 PF00583 Acetyltransferase (GNAT) family KFF05_11395 PF00202 Aminotransferase class-III KFF05_11400 PF06339 Ectoine synthase KFF05_11415 PF02633 Creatinine amidohydrolase KFF05_11420 PF00155 Aminotransferase class I and II KFF05_11430 PF00919 Uncharacterized protein family UPF0004 KFF05_11430 PF04055 Radical SAM superfamily KFF05_11430 PF18693 TRAM domain KFF05_11445 PF00753 Metallo-beta-lactamase superfamily KFF05_11455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFF05_11475 PF00027 Cyclic nucleotide-binding domain KFF05_11475 PF13545 Crp-like helix-turn-helix domain KFF05_11485 PF00850 Histone deacetylase domain KFF05_11495 PF02441 Flavoprotein KFF05_11500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_11500 PF00205 Thiamine pyrophosphate enzyme, central domain KFF05_11500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF05_11510 PF02515 CoA-transferase family III KFF05_11520 PF01022 Bacterial regulatory protein, arsR family KFF05_11525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KFF05_11530 PF03060 Nitronate monooxygenase KFF05_11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_11535 PF03466 LysR substrate binding domain KFF05_11580 PF00005 ABC transporter KFF05_11585 PF01032 FecCD transport family KFF05_11590 PF01497 Periplasmic binding protein KFF05_11600 PF01557 Fumarylacetoacetate (FAA) hydrolase family KFF05_11605 PF08361 MAATS-type transcriptional repressor, C-terminal region KFF05_11605 PF00440 Bacterial regulatory proteins, tetR family KFF05_11610 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_11615 PF12833 Helix-turn-helix domain KFF05_11630 PF14525 AraC-binding-like domain KFF05_11630 PF12833 Helix-turn-helix domain KFF05_11665 PF04303 PrpF protein KFF05_11670 PF01272 Transcription elongation factor, GreA/GreB, C-term KFF05_11670 PF03449 Transcription elongation factor, N-terminal KFF05_11690 PF00180 Isocitrate/isopropylmalate dehydrogenase KFF05_11695 PF00291 Pyridoxal-phosphate dependent enzyme KFF05_11700 PF00155 Aminotransferase class I and II KFF05_11700 PF00392 Bacterial regulatory proteins, gntR family KFF05_11705 PF08543 Phosphomethylpyrimidine kinase KFF05_11705 PF02581 Thiamine monophosphate synthase KFF05_11710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KFF05_11710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KFF05_11710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KFF05_11710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KFF05_11715 PF00809 Pterin binding enzyme KFF05_11720 PF17862 AAA+ lid domain KFF05_11720 PF01434 Peptidase family M41 KFF05_11720 PF00004 ATPase family associated with various cellular activities (AAA) KFF05_11725 PF01171 PP-loop family KFF05_11735 PF00691 OmpA family KFF05_11740 PF04052 TolB amino-terminal domain KFF05_11740 PF07676 WD40-like Beta Propeller Repeat KFF05_11750 PF02472 Biopolymer transport protein ExbD/TolR KFF05_11755 PF01618 MotA/TolQ/ExbB proton channel family KFF05_11760 PF03061 Thioesterase superfamily KFF05_11765 PF05496 Holliday junction DNA helicase RuvB P-loop domain KFF05_11765 PF05491 RuvB C-terminal winged helix domain KFF05_11765 PF17864 RuvB AAA lid domain KFF05_11770 PF01330 RuvA N terminal domain KFF05_11770 PF07499 RuvA, C-terminal domain KFF05_11775 PF02075 Crossover junction endodeoxyribonuclease RuvC KFF05_11780 PF01709 Transcriptional regulator KFF05_11785 PF13277 YmdB-like protein KFF05_11790 PF01812 5-formyltetrahydrofolate cyclo-ligase family KFF05_11805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KFF05_11805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KFF05_11815 PF02581 Thiamine monophosphate synthase KFF05_11820 PF08207 Elongation factor P (EF-P) KOW-like domain KFF05_11820 PF09285 Elongation factor P, C-terminal KFF05_11820 PF01132 Elongation factor P (EF-P) OB domain KFF05_11825 PF00459 Inositol monophosphatase family KFF05_11840 PF13677 Membrane MotB of proton-channel complex MotA/MotB KFF05_11840 PF00691 OmpA family KFF05_11845 PF07690 Major Facilitator Superfamily KFF05_11855 PF01197 Ribosomal protein L31 KFF05_11860 PF00211 Adenylate and Guanylate cyclase catalytic domain KFF05_11865 PF00011 Hsp20/alpha crystallin family KFF05_11875 PF03061 Thioesterase superfamily KFF05_11890 PF08659 KR domain KFF05_11890 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_11890 PF00550 Phosphopantetheine attachment site KFF05_11890 PF14765 Polyketide synthase dehydratase KFF05_11890 PF02801 Beta-ketoacyl synthase, C-terminal domain KFF05_11890 PF16197 Ketoacyl-synthetase C-terminal extension KFF05_11890 PF00109 Beta-ketoacyl synthase, N-terminal domain KFF05_11890 PF00698 Acyl transferase domain KFF05_11900 PF00378 Enoyl-CoA hydratase/isomerase KFF05_11910 PF02515 CoA-transferase family III KFF05_11915 PF07729 FCD domain KFF05_11915 PF00392 Bacterial regulatory proteins, gntR family KFF05_11920 PF12897 Alanine-glyoxylate amino-transferase KFF05_11925 PF00171 Aldehyde dehydrogenase family KFF05_11930 PF16177 Acetyl-coenzyme A synthetase N-terminus KFF05_11930 PF00501 AMP-binding enzyme KFF05_11930 PF13193 AMP-binding enzyme C-terminal domain KFF05_11935 PF00501 AMP-binding enzyme KFF05_11935 PF13193 AMP-binding enzyme C-terminal domain KFF05_11945 PF00365 Phosphofructokinase KFF05_11955 PF00255 Glutathione peroxidase KFF05_11960 PF01740 STAS domain KFF05_11960 PF00916 Sulfate permease family KFF05_11965 PF00270 DEAD/DEAH box helicase KFF05_11965 PF00271 Helicase conserved C-terminal domain KFF05_11980 PF02222 ATP-grasp domain KFF05_11980 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KFF05_11995 PF01327 Polypeptide deformylase KFF05_12000 PF01165 Ribosomal protein S21 KFF05_12010 PF02233 NAD(P) transhydrogenase beta subunit KFF05_12015 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KFF05_12020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KFF05_12020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KFF05_12035 PF01042 Endoribonuclease L-PSP KFF05_12045 PF01906 Putative heavy-metal-binding KFF05_12065 PF00501 AMP-binding enzyme KFF05_12080 PF00561 alpha/beta hydrolase fold KFF05_12085 PF01370 NAD dependent epimerase/dehydratase family KFF05_12110 PF00224 Pyruvate kinase, barrel domain KFF05_12110 PF02887 Pyruvate kinase, alpha/beta domain KFF05_12135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KFF05_12150 PF00924 Mechanosensitive ion channel KFF05_12150 PF12795 Mechanosensitive ion channel porin domain KFF05_12150 PF12794 Mechanosensitive ion channel inner membrane domain 1 KFF05_12160 PF01590 GAF domain KFF05_12160 PF00158 Sigma-54 interaction domain KFF05_12165 PF02272 DHHA1 domain KFF05_12165 PF01411 tRNA synthetases class II (A) KFF05_12165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KFF05_12170 PF00154 recA bacterial DNA recombination protein KFF05_12175 PF08448 PAS fold KFF05_12175 PF13188 PAS domain KFF05_12175 PF00072 Response regulator receiver domain KFF05_12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_12175 PF00512 His Kinase A (phospho-acceptor) domain KFF05_12180 PF01312 FlhB HrpN YscU SpaS Family KFF05_12190 PF01313 Bacterial export proteins, family 3 KFF05_12195 PF02049 Flagellar hook-basal body complex protein FliE KFF05_12200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF05_12205 PF00460 Flagella basal body rod protein KFF05_12225 PF00813 FliP family KFF05_12250 PF13677 Membrane MotB of proton-channel complex MotA/MotB KFF05_12250 PF00691 OmpA family KFF05_12265 PF00072 Response regulator receiver domain KFF05_12280 PF02154 Flagellar motor switch protein FliM KFF05_12280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KFF05_12290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF05_12290 PF00460 Flagella basal body rod protein KFF05_12295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF05_12295 PF00460 Flagella basal body rod protein KFF05_12305 PF02107 Flagellar L-ring protein KFF05_12310 PF14760 Rnk N-terminus KFF05_12310 PF01272 Transcription elongation factor, GreA/GreB, C-term KFF05_12315 PF01258 Prokaryotic dksA/traR C4-type zinc finger KFF05_12320 PF10768 Class II flagellar assembly regulator KFF05_12325 PF13416 Bacterial extracellular solute-binding protein KFF05_12335 PF00005 ABC transporter KFF05_12340 PF00460 Flagella basal body rod protein KFF05_12340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF05_12345 PF02119 Flagellar P-ring protein KFF05_12360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF05_12360 PF07196 Flagellin hook IN motif KFF05_12410 PF07378 Flagellar protein FlbT KFF05_12415 PF03102 NeuB family KFF05_12415 PF08666 SAF domain KFF05_12425 PF13537 Glutamine amidotransferase domain KFF05_12425 PF00733 Asparagine synthase KFF05_12430 PF02348 Cytidylyltransferase KFF05_12435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KFF05_12435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KFF05_12440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KFF05_12460 PF16363 GDP-mannose 4,6 dehydratase KFF05_12465 PF00117 Glutamine amidotransferase class-I KFF05_12470 PF00977 Histidine biosynthesis protein KFF05_12490 PF02348 Cytidylyltransferase KFF05_12500 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KFF05_12505 PF02348 Cytidylyltransferase KFF05_12525 PF13861 FlgD Tudor-like domain KFF05_12525 PF13860 FlgD Ig-like domain KFF05_12525 PF03963 Flagellar hook capping protein - N-terminal region KFF05_12530 PF07559 Flagellar basal body protein FlaE KFF05_12530 PF00460 Flagella basal body rod protein KFF05_12530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF05_12540 PF01514 Secretory protein of YscJ/FliF family KFF05_12540 PF08345 Flagellar M-ring protein C-terminal KFF05_12545 PF14842 FliG N-terminal domain KFF05_12545 PF14841 FliG middle domain KFF05_12545 PF01706 FliG C-terminal domain KFF05_12555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KFF05_12560 PF01618 MotA/TolQ/ExbB proton channel family KFF05_12565 PF02954 Bacterial regulatory protein, Fis family KFF05_12565 PF00158 Sigma-54 interaction domain KFF05_12570 PF00771 FHIPEP family KFF05_12575 PF02881 SRP54-type protein, helical bundle domain KFF05_12575 PF00448 SRP54-type protein, GTPase domain KFF05_12590 PF14489 QueF-like protein KFF05_12600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFF05_12600 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFF05_12600 PF18269 T3SS EscN ATPase C-terminal domain KFF05_12605 PF00072 Response regulator receiver domain KFF05_12605 PF00486 Transcriptional regulatory protein, C terminal KFF05_12610 PF01739 CheR methyltransferase, SAM binding domain KFF05_12610 PF03705 CheR methyltransferase, all-alpha domain KFF05_12615 PF00072 Response regulator receiver domain KFF05_12615 PF01339 CheB methylesterase KFF05_12620 PF00486 Transcriptional regulatory protein, C terminal KFF05_12620 PF00072 Response regulator receiver domain KFF05_12625 PF01584 CheW-like domain KFF05_12625 PF02895 Signal transducing histidine kinase, homodimeric domain KFF05_12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_12625 PF01627 Hpt domain KFF05_12625 PF00072 Response regulator receiver domain KFF05_12630 PF10090 Histidine phosphotransferase C-terminal domain KFF05_12635 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KFF05_12635 PF10531 SLBB domain KFF05_12635 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KFF05_12640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KFF05_12640 PF00384 Molybdopterin oxidoreductase KFF05_12640 PF01568 Molydopterin dinucleotide binding domain KFF05_12640 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KFF05_12640 PF12838 4Fe-4S dicluster domain KFF05_12650 PF01292 Prokaryotic cytochrome b561 KFF05_12660 PF13247 4Fe-4S dicluster domain KFF05_12665 PF12838 4Fe-4S dicluster domain KFF05_12665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KFF05_12665 PF00384 Molybdopterin oxidoreductase KFF05_12665 PF01568 Molydopterin dinucleotide binding domain KFF05_12665 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KFF05_12690 PF12804 MobA-like NTP transferase domain KFF05_12695 PF02634 FdhD/NarQ family KFF05_12700 PF00300 Histidine phosphatase superfamily (branch 1) KFF05_12730 PF06463 Molybdenum Cofactor Synthesis C KFF05_12730 PF04055 Radical SAM superfamily KFF05_12745 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_12750 PF07690 Major Facilitator Superfamily KFF05_12755 PF08361 MAATS-type transcriptional repressor, C-terminal region KFF05_12755 PF00440 Bacterial regulatory proteins, tetR family KFF05_12760 PF01513 ATP-NAD kinase KFF05_12770 PF01180 Dihydroorotate dehydrogenase KFF05_12800 PF01596 O-methyltransferase KFF05_12810 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KFF05_12810 PF00591 Glycosyl transferase family, a/b domain KFF05_12810 PF02885 Glycosyl transferase family, helical bundle domain KFF05_12820 PF00072 Response regulator receiver domain KFF05_12820 PF00512 His Kinase A (phospho-acceptor) domain KFF05_12820 PF01627 Hpt domain KFF05_12820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_12830 PF13230 Glutamine amidotransferases class-II KFF05_12845 PF00271 Helicase conserved C-terminal domain KFF05_12845 PF00270 DEAD/DEAH box helicase KFF05_12850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KFF05_12850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KFF05_12860 PF04542 Sigma-70 region 2 KFF05_12860 PF08281 Sigma-70, region 4 KFF05_12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_12875 PF00512 His Kinase A (phospho-acceptor) domain KFF05_12880 PF02803 Thiolase, C-terminal domain KFF05_12880 PF00108 Thiolase, N-terminal domain KFF05_12885 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KFF05_12885 PF00378 Enoyl-CoA hydratase/isomerase KFF05_12885 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KFF05_12890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_12890 PF00205 Thiamine pyrophosphate enzyme, central domain KFF05_12890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF05_12895 PF13193 AMP-binding enzyme C-terminal domain KFF05_12895 PF00501 AMP-binding enzyme KFF05_12900 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_12900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_12900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_12915 PF00313 'Cold-shock' DNA-binding domain KFF05_12935 PF00989 PAS fold KFF05_12935 PF00512 His Kinase A (phospho-acceptor) domain KFF05_12935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_12945 PF02515 CoA-transferase family III KFF05_12950 PF00211 Adenylate and Guanylate cyclase catalytic domain KFF05_12970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KFF05_12970 PF13378 Enolase C-terminal domain-like KFF05_12980 PF09997 Predicted membrane protein (DUF2238) KFF05_12985 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_12985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_12985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_12990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_12990 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_12990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_12995 PF09339 IclR helix-turn-helix domain KFF05_13010 PF00392 Bacterial regulatory proteins, gntR family KFF05_13015 PF00672 HAMP domain KFF05_13015 PF00909 Ammonium Transporter Family KFF05_13020 PF07690 Major Facilitator Superfamily KFF05_13060 PF00107 Zinc-binding dehydrogenase KFF05_13065 PF01979 Amidohydrolase family KFF05_13070 PF00733 Asparagine synthase KFF05_13070 PF13537 Glutamine amidotransferase domain KFF05_13075 PF13439 Glycosyltransferase Family 4 KFF05_13075 PF00534 Glycosyl transferases group 1 KFF05_13085 PF00535 Glycosyl transferase family 2 KFF05_13095 PF01571 Aminomethyltransferase folate-binding domain KFF05_13105 PF01425 Amidase KFF05_13110 PF00005 ABC transporter KFF05_13115 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_13120 PF09084 NMT1/THI5 like KFF05_13125 PF01614 Bacterial transcriptional regulator KFF05_13125 PF09339 IclR helix-turn-helix domain KFF05_13135 PF10996 Beta-Casp domain KFF05_13135 PF00753 Metallo-beta-lactamase superfamily KFF05_13135 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KFF05_13145 PF05050 Methyltransferase FkbM domain KFF05_13160 PF01050 Mannose-6-phosphate isomerase KFF05_13160 PF00483 Nucleotidyl transferase KFF05_13165 PF01370 NAD dependent epimerase/dehydratase family KFF05_13170 PF16363 GDP-mannose 4,6 dehydratase KFF05_13175 PF00391 PEP-utilising enzyme, mobile domain KFF05_13175 PF02896 PEP-utilising enzyme, TIM barrel domain KFF05_13175 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KFF05_13180 PF05746 DALR anticodon binding domain KFF05_13180 PF02092 Glycyl-tRNA synthetase beta subunit KFF05_13185 PF02091 Glycyl-tRNA synthetase alpha subunit KFF05_13195 PF06965 Na+/H+ antiporter 1 KFF05_13195 PF01343 Peptidase family S49 KFF05_13215 PF00348 Polyprenyl synthetase KFF05_13250 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF05_13265 PF16868 NMT1-like family KFF05_13280 PF16868 NMT1-like family KFF05_13290 PF00202 Aminotransferase class-III KFF05_13300 PF00583 Acetyltransferase (GNAT) family KFF05_13305 PF14815 NUDIX domain KFF05_13305 PF00633 Helix-hairpin-helix motif KFF05_13305 PF00730 HhH-GPD superfamily base excision DNA repair protein KFF05_13310 PF05258 Dna[CI] antecedent, DciA KFF05_13315 PF13462 Thioredoxin KFF05_13320 PF02463 RecF/RecN/SMC N terminal domain KFF05_13325 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter KFF05_13330 PF00119 ATP synthase A chain KFF05_13335 PF00137 ATP synthase subunit C KFF05_13340 PF00430 ATP synthase B/B' CF(0) KFF05_13345 PF00430 ATP synthase B/B' CF(0) KFF05_13350 PF00491 Arginase family KFF05_13355 PF01916 Deoxyhypusine synthase KFF05_13360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KFF05_13360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KFF05_13370 PF00533 BRCA1 C Terminus (BRCT) domain KFF05_13370 PF01653 NAD-dependent DNA ligase adenylation domain KFF05_13370 PF03120 NAD-dependent DNA ligase OB-fold domain KFF05_13370 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KFF05_13370 PF12826 Helix-hairpin-helix motif KFF05_13375 PF13476 AAA domain KFF05_13375 PF02463 RecF/RecN/SMC N terminal domain KFF05_13380 PF13525 Outer membrane lipoprotein KFF05_13385 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KFF05_13390 PF00091 Tubulin/FtsZ family, GTPase domain KFF05_13390 PF12327 FtsZ family, C-terminal domain KFF05_13395 PF02491 SHS2 domain inserted in FTSA KFF05_13400 PF03799 Cell division protein FtsQ KFF05_13400 PF08478 POTRA domain, FtsQ-type KFF05_13405 PF07478 D-ala D-ala ligase C-terminus KFF05_13405 PF01820 D-ala D-ala ligase N-terminus KFF05_13410 PF01565 FAD binding domain KFF05_13410 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KFF05_13415 PF02875 Mur ligase family, glutamate ligase domain KFF05_13415 PF08245 Mur ligase middle domain KFF05_13415 PF01225 Mur ligase family, catalytic domain KFF05_13420 PF04101 Glycosyltransferase family 28 C-terminal domain KFF05_13420 PF03033 Glycosyltransferase family 28 N-terminal domain KFF05_13425 PF01098 Cell cycle protein KFF05_13430 PF08245 Mur ligase middle domain KFF05_13435 PF00953 Glycosyl transferase family 4 KFF05_13440 PF02875 Mur ligase family, glutamate ligase domain KFF05_13440 PF08245 Mur ligase middle domain KFF05_13440 PF01225 Mur ligase family, catalytic domain KFF05_13445 PF02875 Mur ligase family, glutamate ligase domain KFF05_13445 PF01225 Mur ligase family, catalytic domain KFF05_13445 PF08245 Mur ligase middle domain KFF05_13450 PF03717 Penicillin-binding Protein dimerisation domain KFF05_13450 PF00905 Penicillin binding protein transpeptidase domain KFF05_13460 PF01795 MraW methylase family KFF05_13465 PF02381 MraZ protein, putative antitoxin-like KFF05_13475 PF01510 N-acetylmuramoyl-L-alanine amidase KFF05_13480 PF00226 DnaJ domain KFF05_13480 PF05099 Tellurite resistance protein TerB KFF05_13495 PF00890 FAD binding domain KFF05_13495 PF04205 FMN-binding domain KFF05_13500 PF01842 ACT domain KFF05_13500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_13500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_13505 PF05378 Hydantoinase/oxoprolinase N-terminal region KFF05_13505 PF01968 Hydantoinase/oxoprolinase KFF05_13515 PF13291 ACT domain KFF05_13515 PF00291 Pyridoxal-phosphate dependent enzyme KFF05_13530 PF00027 Cyclic nucleotide-binding domain KFF05_13530 PF13545 Crp-like helix-turn-helix domain KFF05_13535 PF02558 Ketopantoate reductase PanE/ApbA KFF05_13535 PF08546 Ketopantoate reductase PanE/ApbA C terminal KFF05_13540 PF01557 Fumarylacetoacetate (FAA) hydrolase family KFF05_13550 PF01268 Formate--tetrahydrofolate ligase KFF05_13555 PF02911 Formyl transferase, C-terminal domain KFF05_13555 PF00551 Formyl transferase KFF05_13560 PF02515 CoA-transferase family III KFF05_13565 PF00205 Thiamine pyrophosphate enzyme, central domain KFF05_13565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_13565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF05_13570 PF00392 Bacterial regulatory proteins, gntR family KFF05_13570 PF07729 FCD domain KFF05_13575 PF01970 Tripartite tricarboxylate transporter TctA family KFF05_13590 PF06299 Protein of unknown function (DUF1045) KFF05_13595 PF00005 ABC transporter KFF05_13600 PF00005 ABC transporter KFF05_13605 PF06007 Phosphonate metabolism protein PhnJ KFF05_13610 PF05861 Bacterial phosphonate metabolism protein (PhnI) KFF05_13615 PF05845 Bacterial phosphonate metabolism protein (PhnH) KFF05_13620 PF06754 Phosphonate metabolism protein PhnG KFF05_13625 PF00392 Bacterial regulatory proteins, gntR family KFF05_13625 PF07702 UTRA domain KFF05_13630 PF07969 Amidohydrolase family KFF05_13635 PF02203 Tar ligand binding domain homologue KFF05_13635 PF00672 HAMP domain KFF05_13635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF05_13640 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_13650 PF00005 ABC transporter KFF05_13655 PF00072 Response regulator receiver domain KFF05_13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_13655 PF00672 HAMP domain KFF05_13655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KFF05_13655 PF00512 His Kinase A (phospho-acceptor) domain KFF05_13655 PF01627 Hpt domain KFF05_13660 PF00072 Response regulator receiver domain KFF05_13675 PF07722 Peptidase C26 KFF05_13695 PF01098 Cell cycle protein KFF05_13700 PF03717 Penicillin-binding Protein dimerisation domain KFF05_13700 PF00905 Penicillin binding protein transpeptidase domain KFF05_13710 PF04085 rod shape-determining protein MreC KFF05_13715 PF00149 Calcineurin-like phosphoesterase KFF05_13720 PF01554 MatE KFF05_13730 PF00682 HMGL-like KFF05_13730 PF08502 LeuA allosteric (dimerisation) domain KFF05_13750 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KFF05_13750 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KFF05_13755 PF10369 Small subunit of acetolactate synthase KFF05_13760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF05_13760 PF00205 Thiamine pyrophosphate enzyme, central domain KFF05_13760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_13765 PF00072 Response regulator receiver domain KFF05_13765 PF00486 Transcriptional regulatory protein, C terminal KFF05_13780 PF13180 PDZ domain KFF05_13795 PF01145 SPFH domain / Band 7 family KFF05_13795 PF12221 Bacterial membrane protein N terminal KFF05_13800 PF10609 NUBPL iron-transfer P-loop NTPase KFF05_13810 PF00186 Dihydrofolate reductase KFF05_13820 PF00303 Thymidylate synthase KFF05_13825 PF02615 Malate/L-lactate dehydrogenase KFF05_13840 PF05683 Fumarase C-terminus KFF05_13840 PF05681 Fumarate hydratase (Fumerase) KFF05_13845 PF10415 Fumarase C C-terminus KFF05_13845 PF00206 Lyase KFF05_13870 PF18029 Glyoxalase-like domain KFF05_13900 PF00689 Cation transporting ATPase, C-terminus KFF05_13900 PF00690 Cation transporter/ATPase, N-terminus KFF05_13905 PF13660 Domain of unknown function (DUF4147) KFF05_13905 PF05161 MOFRL family KFF05_13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_13910 PF00512 His Kinase A (phospho-acceptor) domain KFF05_13910 PF13426 PAS domain KFF05_13910 PF00672 HAMP domain KFF05_13915 PF02913 FAD linked oxidases, C-terminal domain KFF05_13915 PF01565 FAD binding domain KFF05_13930 PF13183 4Fe-4S dicluster domain KFF05_13930 PF02754 Cysteine-rich domain KFF05_13935 PF01565 FAD binding domain KFF05_13940 PF02913 FAD linked oxidases, C-terminal domain KFF05_13940 PF01565 FAD binding domain KFF05_13945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KFF05_13945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KFF05_13950 PF01261 Xylose isomerase-like TIM barrel KFF05_13955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_13955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF05_13955 PF00205 Thiamine pyrophosphate enzyme, central domain KFF05_13960 PF01614 Bacterial transcriptional regulator KFF05_13960 PF09339 IclR helix-turn-helix domain KFF05_13965 PF08241 Methyltransferase domain KFF05_13970 PF00444 Ribosomal protein L36 KFF05_13985 PF02954 Bacterial regulatory protein, Fis family KFF05_13985 PF00072 Response regulator receiver domain KFF05_13985 PF00158 Sigma-54 interaction domain KFF05_13990 PF00072 Response regulator receiver domain KFF05_13990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KFF05_13990 PF01627 Hpt domain KFF05_13990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_13990 PF00512 His Kinase A (phospho-acceptor) domain KFF05_13990 PF00672 HAMP domain KFF05_13995 PF00072 Response regulator receiver domain KFF05_13995 PF00990 Diguanylate cyclase, GGDEF domain KFF05_14000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_14000 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_14000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_14015 PF00005 ABC transporter KFF05_14015 PF00664 ABC transporter transmembrane region KFF05_14015 PF03412 Peptidase C39 family KFF05_14020 PF00529 HlyD membrane-fusion protein of T1SS KFF05_14030 PF01381 Helix-turn-helix KFF05_14035 PF07687 Peptidase dimerisation domain KFF05_14035 PF01546 Peptidase family M20/M25/M40 KFF05_14040 PF01425 Amidase KFF05_14045 PF16868 NMT1-like family KFF05_14055 PF07729 FCD domain KFF05_14055 PF00392 Bacterial regulatory proteins, gntR family KFF05_14065 PF05721 Phytanoyl-CoA dioxygenase (PhyH) KFF05_14075 PF00132 Bacterial transferase hexapeptide (six repeats) KFF05_14080 PF00501 AMP-binding enzyme KFF05_14080 PF13193 AMP-binding enzyme C-terminal domain KFF05_14090 PF01381 Helix-turn-helix KFF05_14100 PF01546 Peptidase family M20/M25/M40 KFF05_14100 PF07687 Peptidase dimerisation domain KFF05_14120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF05_14125 PF00873 AcrB/AcrD/AcrF family KFF05_14165 PF01297 Zinc-uptake complex component A periplasmic KFF05_14170 PF00005 ABC transporter KFF05_14175 PF00950 ABC 3 transport family KFF05_14200 PF02348 Cytidylyltransferase KFF05_14235 PF00501 AMP-binding enzyme KFF05_14235 PF13193 AMP-binding enzyme C-terminal domain KFF05_14250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF05_14250 PF02770 Acyl-CoA dehydrogenase, middle domain KFF05_14250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF05_14275 PF07005 Sugar-binding N-terminal domain KFF05_14275 PF17042 Nucleotide-binding C-terminal domain KFF05_14280 PF00596 Class II Aldolase and Adducin N-terminal domain KFF05_14285 PF17149 Periplasmic sensor domain found in signal transduction proteins KFF05_14285 PF00672 HAMP domain KFF05_14285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_14285 PF00072 Response regulator receiver domain KFF05_14285 PF01627 Hpt domain KFF05_14285 PF00512 His Kinase A (phospho-acceptor) domain KFF05_14300 PF00378 Enoyl-CoA hydratase/isomerase KFF05_14305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_14305 PF03459 TOBE domain KFF05_14315 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_14320 PF00005 ABC transporter KFF05_14320 PF03459 TOBE domain KFF05_14335 PF07715 TonB-dependent Receptor Plug Domain KFF05_14335 PF00593 TonB dependent receptor KFF05_14345 PF08281 Sigma-70, region 4 KFF05_14345 PF04542 Sigma-70 region 2 KFF05_14345 PF12680 SnoaL-like domain KFF05_14370 PF07715 TonB-dependent Receptor Plug Domain KFF05_14370 PF00593 TonB dependent receptor KFF05_14395 PF02472 Biopolymer transport protein ExbD/TolR KFF05_14400 PF01618 MotA/TolQ/ExbB proton channel family KFF05_14410 PF00593 TonB dependent receptor KFF05_14410 PF07660 Secretin and TonB N terminus short domain KFF05_14410 PF07715 TonB-dependent Receptor Plug Domain KFF05_14425 PF04542 Sigma-70 region 2 KFF05_14425 PF04545 Sigma-70, region 4 KFF05_14435 PF00593 TonB dependent receptor KFF05_14435 PF07715 TonB-dependent Receptor Plug Domain KFF05_14465 PF07715 TonB-dependent Receptor Plug Domain KFF05_14465 PF00593 TonB dependent receptor KFF05_14490 PF03459 TOBE domain KFF05_14500 PF01812 5-formyltetrahydrofolate cyclo-ligase family KFF05_14505 PF03060 Nitronate monooxygenase KFF05_14515 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KFF05_14515 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KFF05_14520 PF03466 LysR substrate binding domain KFF05_14520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_14525 PF02082 Transcriptional regulator KFF05_14530 PF07732 Multicopper oxidase KFF05_14545 PF07732 Multicopper oxidase KFF05_14550 PF08376 Nitrate and nitrite sensing KFF05_14550 PF03861 ANTAR domain KFF05_14560 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_14560 PF04324 BFD-like [2Fe-2S] binding domain KFF05_14560 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KFF05_14560 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KFF05_14560 PF18267 Rubredoxin NAD+ reductase C-terminal domain KFF05_14580 PF18267 Rubredoxin NAD+ reductase C-terminal domain KFF05_14580 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_14580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KFF05_14580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KFF05_14580 PF04324 BFD-like [2Fe-2S] binding domain KFF05_14585 PF00355 Rieske [2Fe-2S] domain KFF05_14590 PF01568 Molydopterin dinucleotide binding domain KFF05_14590 PF00384 Molybdopterin oxidoreductase KFF05_14590 PF04324 BFD-like [2Fe-2S] binding domain KFF05_14590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KFF05_14595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF05_14595 PF14824 Sirohaem biosynthesis protein central KFF05_14595 PF10414 Sirohaem synthase dimerisation region KFF05_14610 PF01276 Orn/Lys/Arg decarboxylase, major domain KFF05_14610 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain KFF05_14610 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KFF05_14615 PF00795 Carbon-nitrogen hydrolase KFF05_14620 PF00202 Aminotransferase class-III KFF05_14640 PF00005 ABC transporter KFF05_14645 PF01032 FecCD transport family KFF05_14655 PF07715 TonB-dependent Receptor Plug Domain KFF05_14655 PF04886 PT repeat KFF05_14655 PF00593 TonB dependent receptor KFF05_14665 PF00589 Phage integrase family KFF05_14690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KFF05_14690 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_14705 PF00403 Heavy-metal-associated domain KFF05_14710 PF02411 MerT mercuric transport protein KFF05_14715 PF13411 MerR HTH family regulatory protein KFF05_14720 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KFF05_14755 PF01551 Peptidase family M23 KFF05_14755 PF08525 Opacity-associated protein A N-terminal motif KFF05_14755 PF01476 LysM domain KFF05_14760 PF12697 Alpha/beta hydrolase family KFF05_14780 PF08241 Methyltransferase domain KFF05_14785 PF17871 AAA lid domain KFF05_14785 PF02861 Clp amino terminal domain, pathogenicity island component KFF05_14785 PF10431 C-terminal, D2-small domain, of ClpB protein KFF05_14785 PF07724 AAA domain (Cdc48 subfamily) KFF05_14785 PF00004 ATPase family associated with various cellular activities (AAA) KFF05_14800 PF13847 Methyltransferase domain KFF05_14800 PF17827 PrmC N-terminal domain KFF05_14805 PF03462 PCRF domain KFF05_14805 PF00472 RF-1 domain KFF05_14810 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KFF05_14810 PF01488 Shikimate / quinate 5-dehydrogenase KFF05_14810 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KFF05_14815 PF03129 Anticodon binding domain KFF05_14815 PF13393 Histidyl-tRNA synthetase KFF05_14820 PF04551 GcpE protein KFF05_14825 PF13464 Domain of unknown function (DUF4115) KFF05_14830 PF01590 GAF domain KFF05_14830 PF05524 PEP-utilising enzyme, N-terminal KFF05_14830 PF00391 PEP-utilising enzyme, mobile domain KFF05_14830 PF02896 PEP-utilising enzyme, TIM barrel domain KFF05_14835 PF01842 ACT domain KFF05_14835 PF13840 ACT domain KFF05_14835 PF00696 Amino acid kinase family KFF05_14845 PF13188 PAS domain KFF05_14845 PF00512 His Kinase A (phospho-acceptor) domain KFF05_14845 PF00989 PAS fold KFF05_14845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_14850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KFF05_14850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KFF05_14870 PF03466 LysR substrate binding domain KFF05_14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_14875 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_14885 PF00691 OmpA family KFF05_14890 PF00795 Carbon-nitrogen hydrolase KFF05_14895 PF00462 Glutaredoxin KFF05_14900 PF00156 Phosphoribosyl transferase domain KFF05_14905 PF01209 ubiE/COQ5 methyltransferase family KFF05_14910 PF17746 SfsA N-terminal OB domain KFF05_14910 PF03749 Sugar fermentation stimulation protein RE domain KFF05_14915 PF00557 Metallopeptidase family M24 KFF05_14920 PF04002 RadC-like JAB domain KFF05_14925 PF00520 Ion transport protein KFF05_14925 PF00027 Cyclic nucleotide-binding domain KFF05_14945 PF01613 Flavin reductase like domain KFF05_14980 PF00206 Lyase KFF05_14980 PF10397 Adenylosuccinate lyase C-terminus KFF05_15000 PF01259 SAICAR synthetase KFF05_15005 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KFF05_15015 PF02386 Cation transport protein KFF05_15025 PF03972 MmgE/PrpD family KFF05_15040 PF02769 AIR synthase related protein, C-terminal domain KFF05_15040 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KFF05_15040 PF00586 AIR synthase related protein, N-terminal domain KFF05_15050 PF00462 Glutaredoxin KFF05_15055 PF10417 C-terminal domain of 1-Cys peroxiredoxin KFF05_15055 PF00578 AhpC/TSA family KFF05_15060 PF13192 Thioredoxin domain KFF05_15060 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_15070 PF00163 Ribosomal protein S4/S9 N-terminal domain KFF05_15070 PF01479 S4 domain KFF05_15075 PF08402 TOBE domain KFF05_15075 PF00005 ABC transporter KFF05_15085 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_15090 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_15095 PF02690 Na+/Pi-cotransporter KFF05_15100 PF00171 Aldehyde dehydrogenase family KFF05_15105 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase KFF05_15110 PF01266 FAD dependent oxidoreductase KFF05_15110 PF01571 Aminomethyltransferase folate-binding domain KFF05_15110 PF08669 Glycine cleavage T-protein C-terminal barrel domain KFF05_15110 PF16350 FAD dependent oxidoreductase central domain KFF05_15115 PF00266 Aminotransferase class-V KFF05_15120 PF00528 Binding-protein-dependent transport system inner membrane component KFF05_15125 PF00005 ABC transporter KFF05_15135 PF03466 LysR substrate binding domain KFF05_15135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_15150 PF03951 Glutamine synthetase, beta-Grasp domain KFF05_15150 PF00120 Glutamine synthetase, catalytic domain KFF05_15155 PF00465 Iron-containing alcohol dehydrogenase KFF05_15160 PF00171 Aldehyde dehydrogenase family KFF05_15165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_15165 PF01842 ACT domain KFF05_15165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_15170 PF00202 Aminotransferase class-III KFF05_15175 PF04945 YHS domain KFF05_15180 PF00376 MerR family regulatory protein KFF05_15180 PF09278 MerR, DNA binding KFF05_15200 PF00394 Multicopper oxidase KFF05_15200 PF07731 Multicopper oxidase KFF05_15200 PF07732 Multicopper oxidase KFF05_15205 PF05275 Copper resistance protein B precursor (CopB) KFF05_15225 PF02230 Phospholipase/Carboxylesterase KFF05_15230 PF00749 tRNA synthetases class I (E and Q), catalytic domain KFF05_15240 PF13181 Tetratricopeptide repeat KFF05_15240 PF01435 Peptidase family M48 KFF05_15255 PF00037 4Fe-4S binding domain KFF05_15255 PF11953 Domain of unknown function (DUF3470) KFF05_15270 PF01479 S4 domain KFF05_15285 PF00183 Hsp90 protein KFF05_15295 PF00330 Aconitase family (aconitate hydratase) KFF05_15295 PF00694 Aconitase C-terminal domain KFF05_15300 PF00330 Aconitase family (aconitate hydratase) KFF05_15300 PF06434 Aconitate hydratase 2 N-terminus KFF05_15300 PF11791 Aconitate B N-terminal domain KFF05_15305 PF00501 AMP-binding enzyme KFF05_15310 PF00005 ABC transporter KFF05_15310 PF12399 Branched-chain amino acid ATP-binding cassette transporter KFF05_15315 PF02653 Branched-chain amino acid transport system / permease component KFF05_15320 PF11862 Domain of unknown function (DUF3382) KFF05_15320 PF02653 Branched-chain amino acid transport system / permease component KFF05_15330 PF00005 ABC transporter KFF05_15350 PF00005 ABC transporter KFF05_15355 PF03379 CcmB protein KFF05_15360 PF01578 Cytochrome C assembly protein KFF05_15370 PF03100 CcmE KFF05_15375 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KFF05_15375 PF01578 Cytochrome C assembly protein KFF05_15380 PF08534 Redoxin KFF05_15385 PF03918 Cytochrome C biogenesis protein KFF05_15395 PF00162 Phosphoglycerate kinase KFF05_15435 PF13617 YnbE-like lipoprotein KFF05_15450 PF01425 Amidase KFF05_15460 PF00448 SRP54-type protein, GTPase domain KFF05_15460 PF02881 SRP54-type protein, helical bundle domain KFF05_15465 PF04055 Radical SAM superfamily KFF05_15465 PF00919 Uncharacterized protein family UPF0004 KFF05_15470 PF01678 Diaminopimelate epimerase KFF05_15485 PF02978 Signal peptide binding domain KFF05_15485 PF02881 SRP54-type protein, helical bundle domain KFF05_15485 PF00448 SRP54-type protein, GTPase domain KFF05_15490 PF00886 Ribosomal protein S16 KFF05_15495 PF05239 PRC-barrel domain KFF05_15495 PF01782 RimM N-terminal domain KFF05_15500 PF01746 tRNA (Guanine-1)-methyltransferase KFF05_15505 PF01245 Ribosomal protein L19 KFF05_15510 PF00330 Aconitase family (aconitate hydratase) KFF05_15515 PF00694 Aconitase C-terminal domain KFF05_15520 PF00180 Isocitrate/isopropylmalate dehydrogenase KFF05_15525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_15525 PF00512 His Kinase A (phospho-acceptor) domain KFF05_15525 PF00989 PAS fold KFF05_15525 PF13426 PAS domain KFF05_15525 PF13188 PAS domain KFF05_15530 PF01118 Semialdehyde dehydrogenase, NAD binding domain KFF05_15530 PF02774 Semialdehyde dehydrogenase, dimerisation domain KFF05_15540 PF00394 Multicopper oxidase KFF05_15540 PF07731 Multicopper oxidase KFF05_15540 PF07732 Multicopper oxidase KFF05_15545 PF00311 Phosphoenolpyruvate carboxylase KFF05_15585 PF03328 HpcH/HpaI aldolase/citrate lyase family KFF05_15590 PF01575 MaoC like domain KFF05_15605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KFF05_15615 PF00890 FAD binding domain KFF05_15615 PF02910 Fumarate reductase flavoprotein C-term KFF05_15620 PF13085 2Fe-2S iron-sulfur cluster binding domain KFF05_15630 PF04299 Putative FMN-binding domain KFF05_15645 PF03969 AFG1-like ATPase KFF05_15650 PF02445 Quinolinate synthetase A protein KFF05_15655 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KFF05_15655 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KFF05_15665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KFF05_15665 PF00056 lactate/malate dehydrogenase, NAD binding domain KFF05_15670 PF08442 ATP-grasp domain KFF05_15670 PF00549 CoA-ligase KFF05_15675 PF02629 CoA binding domain KFF05_15675 PF00549 CoA-ligase KFF05_15680 PF16078 2-oxoglutarate dehydrogenase N-terminus KFF05_15680 PF00676 Dehydrogenase E1 component KFF05_15680 PF16870 2-oxoglutarate dehydrogenase C-terminal KFF05_15680 PF02779 Transketolase, pyrimidine binding domain KFF05_15685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KFF05_15685 PF00364 Biotin-requiring enzyme KFF05_15685 PF02817 e3 binding domain KFF05_15690 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_15690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KFF05_15700 PF02899 Phage integrase, N-terminal SAM-like domain KFF05_15700 PF00589 Phage integrase family KFF05_15710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KFF05_15710 PF00270 DEAD/DEAH box helicase KFF05_15710 PF17764 3′ DNA-binding domain (3′BD) KFF05_15710 PF18074 Primosomal protein N C-terminal domain KFF05_15715 PF00213 ATP synthase delta (OSCP) subunit KFF05_15720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFF05_15720 PF00306 ATP synthase alpha/beta chain, C terminal domain KFF05_15720 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFF05_15725 PF00231 ATP synthase KFF05_15730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFF05_15730 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFF05_15735 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KFF05_15750 PF00271 Helicase conserved C-terminal domain KFF05_15750 PF04851 Type III restriction enzyme, res subunit KFF05_15750 PF02151 UvrB/uvrC motif KFF05_15750 PF12344 Ultra-violet resistance protein B KFF05_15750 PF17757 UvrB interaction domain KFF05_15755 PF00206 Lyase KFF05_15755 PF10397 Adenylosuccinate lyase C-terminus KFF05_15770 PF01053 Cys/Met metabolism PLP-dependent enzyme KFF05_15775 PF00155 Aminotransferase class I and II KFF05_15785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KFF05_15785 PF13378 Enolase C-terminal domain-like KFF05_15790 PF01037 Lrp/AsnC ligand binding domain KFF05_15795 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_15800 PF03466 LysR substrate binding domain KFF05_15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_15805 PF00009 Elongation factor Tu GTP binding domain KFF05_15805 PF03764 Elongation factor G, domain IV KFF05_15805 PF14492 Elongation Factor G, domain II KFF05_15805 PF00679 Elongation factor G C-terminus KFF05_15810 PF04379 ApaG domain KFF05_15815 PF01227 GTP cyclohydrolase I KFF05_15820 PF02386 Cation transport protein KFF05_15835 PF01430 Hsp33 protein KFF05_15845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KFF05_15845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KFF05_15850 PF00202 Aminotransferase class-III KFF05_15855 PF01061 ABC-2 type transporter KFF05_15860 PF02631 RecX family KFF05_15875 PF18030 RimK PreATP-grasp domain KFF05_15875 PF08443 RimK-like ATP-grasp domain KFF05_15885 PF00924 Mechanosensitive ion channel KFF05_15890 PF03960 ArsC family KFF05_15935 PF00005 ABC transporter KFF05_15940 PF04055 Radical SAM superfamily KFF05_15950 PF01474 Class-II DAHP synthetase family KFF05_15960 PF02540 NAD synthase KFF05_15960 PF00795 Carbon-nitrogen hydrolase KFF05_15965 PF01406 tRNA synthetases class I (C) catalytic domain KFF05_15965 PF09190 DALR domain KFF05_15970 PF02911 Formyl transferase, C-terminal domain KFF05_15970 PF01370 NAD dependent epimerase/dehydratase family KFF05_15970 PF00551 Formyl transferase KFF05_15975 PF03707 Bacterial signalling protein N terminal repeat KFF05_15975 PF00990 Diguanylate cyclase, GGDEF domain KFF05_15975 PF00563 EAL domain KFF05_15985 PF00588 SpoU rRNA Methylase family KFF05_15990 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_15990 PF00107 Zinc-binding dehydrogenase KFF05_15995 PF03232 Ubiquinone biosynthesis protein COQ7 KFF05_16000 PF02600 Disulfide bond formation protein DsbB KFF05_16005 PF09335 SNARE associated Golgi protein KFF05_16010 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_16020 PF00486 Transcriptional regulatory protein, C terminal KFF05_16020 PF00072 Response regulator receiver domain KFF05_16035 PF01037 Lrp/AsnC ligand binding domain KFF05_16050 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF05_16050 PF00175 Oxidoreductase NAD-binding domain KFF05_16055 PF00180 Isocitrate/isopropylmalate dehydrogenase KFF05_16070 PF01575 MaoC like domain KFF05_16075 PF01687 Riboflavin kinase KFF05_16075 PF06574 FAD synthetase KFF05_16080 PF00133 tRNA synthetases class I (I, L, M and V) KFF05_16080 PF08264 Anticodon-binding domain of tRNA KFF05_16085 PF01252 Signal peptidase (SPase) II KFF05_16095 PF05193 Peptidase M16 inactive domain KFF05_16095 PF00675 Insulinase (Peptidase family M16) KFF05_16100 PF05193 Peptidase M16 inactive domain KFF05_16105 PF00342 Phosphoglucose isomerase KFF05_16110 PF01119 DNA mismatch repair protein, C-terminal domain KFF05_16110 PF08676 MutL C terminal dimerisation domain KFF05_16125 PF00849 RNA pseudouridylate synthase KFF05_16125 PF01479 S4 domain KFF05_16130 PF14437 MafB19-like deaminase KFF05_16145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KFF05_16145 PF02844 Phosphoribosylglycinamide synthetase, N domain KFF05_16145 PF02843 Phosphoribosylglycinamide synthetase, C domain KFF05_16150 PF02601 Exonuclease VII, large subunit KFF05_16150 PF13742 OB-fold nucleic acid binding domain KFF05_16155 PF01551 Peptidase family M23 KFF05_16165 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KFF05_16180 PF00664 ABC transporter transmembrane region KFF05_16180 PF00005 ABC transporter KFF05_16185 PF13439 Glycosyltransferase Family 4 KFF05_16185 PF00534 Glycosyl transferases group 1 KFF05_16195 PF00781 Diacylglycerol kinase catalytic domain KFF05_16205 PF16884 N-terminal domain of oxidoreductase KFF05_16205 PF00107 Zinc-binding dehydrogenase KFF05_16210 PF01523 Putative modulator of DNA gyrase KFF05_16215 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KFF05_16215 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KFF05_16215 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KFF05_16220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF05_16225 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF05_16235 PF01053 Cys/Met metabolism PLP-dependent enzyme KFF05_16250 PF01523 Putative modulator of DNA gyrase KFF05_16255 PF01921 tRNA synthetases class I (K) KFF05_16260 PF04107 Glutamate-cysteine ligase family 2(GCS2) KFF05_16265 PF04452 RNA methyltransferase KFF05_16270 PF01040 UbiA prenyltransferase family KFF05_16290 PF01063 Amino-transferase class IV KFF05_16295 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KFF05_16300 PF01966 HD domain KFF05_16315 PF01903 CbiX KFF05_16320 PF02570 Precorrin-8X methylmutase KFF05_16325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF05_16330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF05_16335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF05_16340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF05_16345 PF02571 Precorrin-6x reductase CbiJ/CobK KFF05_16350 PF01888 CbiD KFF05_16355 PF01226 Formate/nitrite transporter KFF05_16360 PF02630 SCO1/SenC KFF05_16365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KFF05_16365 PF07685 CobB/CobQ-like glutamine amidotransferase domain KFF05_16370 PF03692 Putative zinc- or iron-chelating domain KFF05_16375 PF00701 Dihydrodipicolinate synthetase family KFF05_16385 PF02805 Metal binding domain of Ada KFF05_16385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KFF05_16385 PF12833 Helix-turn-helix domain KFF05_16385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KFF05_16395 PF01894 Uncharacterised protein family UPF0047 KFF05_16420 PF14659 Phage integrase, N-terminal SAM-like domain KFF05_16420 PF00589 Phage integrase family KFF05_16440 PF02796 Helix-turn-helix domain of resolvase KFF05_16440 PF00239 Resolvase, N terminal domain KFF05_16460 PF12706 Beta-lactamase superfamily domain KFF05_16470 PF00005 ABC transporter KFF05_16480 PF01367 5'-3' exonuclease, C-terminal SAM fold KFF05_16480 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KFF05_16480 PF00476 DNA polymerase family A KFF05_16480 PF01612 3'-5' exonuclease KFF05_16490 PF16123 Hydroxyacylglutathione hydrolase C-terminus KFF05_16490 PF00753 Metallo-beta-lactamase superfamily KFF05_16495 PF01794 Ferric reductase like transmembrane component KFF05_16500 PF00174 Oxidoreductase molybdopterin binding domain KFF05_16505 PF00043 Glutathione S-transferase, C-terminal domain KFF05_16505 PF13417 Glutathione S-transferase, N-terminal domain KFF05_16540 PF07486 Cell Wall Hydrolase KFF05_16690 PF03129 Anticodon binding domain KFF05_16690 PF02824 TGS domain KFF05_16690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KFF05_16690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KFF05_16695 PF05198 Translation initiation factor IF-3, N-terminal domain KFF05_16695 PF00707 Translation initiation factor IF-3, C-terminal domain KFF05_16715 PF01642 Methylmalonyl-CoA mutase KFF05_16715 PF02310 B12 binding domain KFF05_16740 PF00561 alpha/beta hydrolase fold KFF05_16760 PF05114 Protein of unknown function (DUF692) KFF05_16775 PF13180 PDZ domain KFF05_16775 PF17820 PDZ domain KFF05_16780 PF02515 CoA-transferase family III KFF05_16785 PF00266 Aminotransferase class-V KFF05_16790 PF13183 4Fe-4S dicluster domain KFF05_16790 PF01565 FAD binding domain KFF05_16790 PF02913 FAD linked oxidases, C-terminal domain KFF05_16795 PF07729 FCD domain KFF05_16795 PF00392 Bacterial regulatory proteins, gntR family KFF05_16800 PF00672 HAMP domain KFF05_16800 PF00211 Adenylate and Guanylate cyclase catalytic domain KFF05_16800 PF02743 Cache domain KFF05_16810 PF03483 B3/4 domain KFF05_16810 PF03484 tRNA synthetase B5 domain KFF05_16810 PF03147 Ferredoxin-fold anticodon binding domain KFF05_16810 PF01588 Putative tRNA binding domain KFF05_16810 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KFF05_16815 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KFF05_16815 PF01409 tRNA synthetases class II core domain (F) KFF05_16820 PF00453 Ribosomal protein L20 KFF05_16825 PF01632 Ribosomal protein L35 KFF05_16830 PF00512 His Kinase A (phospho-acceptor) domain KFF05_16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_16840 PF03186 CobD/Cbib protein KFF05_16845 PF00501 AMP-binding enzyme KFF05_16845 PF13193 AMP-binding enzyme C-terminal domain KFF05_16850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_16850 PF03466 LysR substrate binding domain KFF05_16855 PF00378 Enoyl-CoA hydratase/isomerase KFF05_16865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_16865 PF03466 LysR substrate binding domain KFF05_16885 PF08446 PAS fold KFF05_16885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_16885 PF01590 GAF domain KFF05_16885 PF00360 Phytochrome region KFF05_16885 PF00512 His Kinase A (phospho-acceptor) domain KFF05_16890 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_16890 PF00107 Zinc-binding dehydrogenase KFF05_16910 PF04055 Radical SAM superfamily KFF05_16920 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KFF05_16935 PF00764 Arginosuccinate synthase KFF05_16945 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF05_16950 PF03466 LysR substrate binding domain KFF05_16950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF05_16960 PF03167 Uracil DNA glycosylase superfamily KFF05_16965 PF08281 Sigma-70, region 4 KFF05_16965 PF04542 Sigma-70 region 2 KFF05_16975 PF00034 Cytochrome c KFF05_16980 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KFF05_16985 PF02146 Sir2 family KFF05_16990 PF01451 Low molecular weight phosphotyrosine protein phosphatase KFF05_16995 PF13419 Haloacid dehalogenase-like hydrolase KFF05_17010 PF13472 GDSL-like Lipase/Acylhydrolase family KFF05_17015 PF00005 ABC transporter KFF05_17025 PF01027 Inhibitor of apoptosis-promoting Bax1 KFF05_17030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_17030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_17060 PF02543 Carbamoyltransferase N-terminus KFF05_17060 PF16861 Carbamoyltransferase C-terminus KFF05_17090 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KFF05_17090 PF03900 Porphobilinogen deaminase, C-terminal domain KFF05_17095 PF00814 Glycoprotease family KFF05_17100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KFF05_17100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KFF05_17115 PF16177 Acetyl-coenzyme A synthetase N-terminus KFF05_17115 PF00501 AMP-binding enzyme KFF05_17115 PF13193 AMP-binding enzyme C-terminal domain KFF05_17130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KFF05_17130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KFF05_17135 PF01799 [2Fe-2S] binding domain KFF05_17135 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF05_17140 PF06114 IrrE N-terminal-like domain KFF05_17140 PF09856 Predicted transcriptional regulator (DUF2083) KFF05_17140 PF01381 Helix-turn-helix KFF05_17165 PF01189 16S rRNA methyltransferase RsmB/F KFF05_17165 PF01029 NusB family KFF05_17175 PF04932 O-Antigen ligase KFF05_17180 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KFF05_17205 PF00467 KOW motif KFF05_17205 PF02357 Transcription termination factor nusG KFF05_17210 PF02348 Cytidylyltransferase KFF05_17215 PF16363 GDP-mannose 4,6 dehydratase KFF05_17220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KFF05_17225 PF08666 SAF domain KFF05_17225 PF03102 NeuB family KFF05_17235 PF00483 Nucleotidyl transferase KFF05_17240 PF00977 Histidine biosynthesis protein KFF05_17245 PF00117 Glutamine amidotransferase class-I KFF05_17270 PF14306 PUA-like domain KFF05_17270 PF01747 ATP-sulfurylase KFF05_17280 PF02719 Polysaccharide biosynthesis protein KFF05_17285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KFF05_17290 PF00005 ABC transporter KFF05_17290 PF00664 ABC transporter transmembrane region KFF05_17295 PF13580 SIS domain KFF05_17315 PF00391 PEP-utilising enzyme, mobile domain KFF05_17315 PF02887 Pyruvate kinase, alpha/beta domain KFF05_17315 PF00224 Pyruvate kinase, barrel domain KFF05_17320 PF16363 GDP-mannose 4,6 dehydratase KFF05_17330 PF00535 Glycosyl transferase family 2 KFF05_17360 PF00923 Transaldolase/Fructose-6-phosphate aldolase KFF05_17365 PF16363 GDP-mannose 4,6 dehydratase KFF05_17370 PF16363 GDP-mannose 4,6 dehydratase KFF05_17405 PF00456 Transketolase, thiamine diphosphate binding domain KFF05_17410 PF02779 Transketolase, pyrimidine binding domain KFF05_17410 PF02780 Transketolase, C-terminal domain KFF05_17415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KFF05_17420 PF16861 Carbamoyltransferase C-terminus KFF05_17420 PF02543 Carbamoyltransferase N-terminus KFF05_17430 PF16861 Carbamoyltransferase C-terminus KFF05_17430 PF02543 Carbamoyltransferase N-terminus KFF05_17435 PF04055 Radical SAM superfamily KFF05_17435 PF06463 Molybdenum Cofactor Synthesis C KFF05_17445 PF02348 Cytidylyltransferase KFF05_17455 PF00583 Acetyltransferase (GNAT) family KFF05_17460 PF08666 SAF domain KFF05_17460 PF03102 NeuB family KFF05_17480 PF00155 Aminotransferase class I and II KFF05_17490 PF02348 Cytidylyltransferase KFF05_17500 PF01761 3-dehydroquinate synthase KFF05_17505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_17505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_17505 PF01842 ACT domain KFF05_17515 PF00483 Nucleotidyl transferase KFF05_17520 PF16363 GDP-mannose 4,6 dehydratase KFF05_17535 PF00535 Glycosyl transferase family 2 KFF05_17545 PF00117 Glutamine amidotransferase class-I KFF05_17550 PF00977 Histidine biosynthesis protein KFF05_17555 PF13439 Glycosyltransferase Family 4 KFF05_17555 PF00534 Glycosyl transferases group 1 KFF05_17560 PF00733 Asparagine synthase KFF05_17560 PF13537 Glutamine amidotransferase domain KFF05_17565 PF00733 Asparagine synthase KFF05_17565 PF13537 Glutamine amidotransferase domain KFF05_17575 PF00132 Bacterial transferase hexapeptide (six repeats) KFF05_17580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KFF05_17585 PF02350 UDP-N-acetylglucosamine 2-epimerase KFF05_17610 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KFF05_17610 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KFF05_17610 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KFF05_17615 PF00534 Glycosyl transferases group 1 KFF05_17615 PF13439 Glycosyltransferase Family 4 KFF05_17620 PF00953 Glycosyl transferase family 4 KFF05_17625 PF02719 Polysaccharide biosynthesis protein KFF05_17630 PF02142 MGS-like domain KFF05_17630 PF01808 AICARFT/IMPCHase bienzyme KFF05_17635 PF13580 SIS domain KFF05_17640 PF05088 Bacterial NAD-glutamate dehydrogenase KFF05_17655 PF00085 Thioredoxin KFF05_17665 PF03966 Trm112p-like protein KFF05_17690 PF00890 FAD binding domain KFF05_17690 PF02910 Fumarate reductase flavoprotein C-term KFF05_17705 PF01494 FAD binding domain KFF05_17710 PF00543 Nitrogen regulatory protein P-II KFF05_17715 PF00909 Ammonium Transporter Family KFF05_17720 PF00155 Aminotransferase class I and II KFF05_17725 PF17854 FtsK alpha domain KFF05_17725 PF01580 FtsK/SpoIIIE family KFF05_17725 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KFF05_17725 PF09397 Ftsk gamma domain KFF05_17735 PF03372 Endonuclease/Exonuclease/phosphatase family KFF05_17740 PF00512 His Kinase A (phospho-acceptor) domain KFF05_17740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF05_17750 PF00486 Transcriptional regulatory protein, C terminal KFF05_17750 PF00072 Response regulator receiver domain KFF05_17755 PF00925 GTP cyclohydrolase II KFF05_17770 PF01168 Alanine racemase, N-terminal domain KFF05_17775 PF08543 Phosphomethylpyrimidine kinase KFF05_17775 PF02581 Thiamine monophosphate synthase KFF05_17785 PF08264 Anticodon-binding domain of tRNA KFF05_17785 PF00133 tRNA synthetases class I (I, L, M and V) KFF05_17785 PF13603 Leucyl-tRNA synthetase, Domain 2 KFF05_17800 PF17762 HTH domain found in ParB protein KFF05_17800 PF02195 ParB-like nuclease domain KFF05_17805 PF13614 AAA domain KFF05_17810 PF02527 rRNA small subunit methyltransferase G KFF05_17815 PF13932 GidA associated domain KFF05_17815 PF01134 Glucose inhibited division protein A KFF05_17820 PF01926 50S ribosome-binding GTPase KFF05_17820 PF12631 MnmE helical domain KFF05_17820 PF10396 GTP-binding protein TrmE N-terminus KFF05_17835 PF03190 Protein of unknown function, DUF255 KFF05_17840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KFF05_17840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KFF05_17845 PF00107 Zinc-binding dehydrogenase KFF05_17845 PF08240 Alcohol dehydrogenase GroES-like domain KFF05_17850 PF07498 Rho termination factor, N-terminal domain KFF05_17850 PF07497 Rho termination factor, RNA-binding domain KFF05_17850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFF05_17855 PF03653 Uncharacterised protein family (UPF0093) KFF05_17860 PF00762 Ferrochelatase KFF05_17865 PF01208 Uroporphyrinogen decarboxylase (URO-D) KFF05_17870 PF03618 Kinase/pyrophosphorylase KFF05_17875 PF02545 Maf-like protein KFF05_17880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KFF05_17880 PF01488 Shikimate / quinate 5-dehydrogenase KFF05_17880 PF08501 Shikimate dehydrogenase substrate binding domain KFF05_17885 PF01121 Dephospho-CoA kinase KFF05_17890 PF00929 Exonuclease KFF05_17895 PF02556 Preprotein translocase subunit SecB KFF05_17900 PF04186 FxsA cytoplasmic membrane protein KFF05_17910 PF03562 MltA specific insert domain KFF05_17910 PF06725 3D domain KFF05_17915 PF02754 Cysteine-rich domain KFF05_17920 PF13183 4Fe-4S dicluster domain KFF05_17920 PF11870 Domain of unknown function (DUF3390) KFF05_17920 PF02589 LUD domain KFF05_17925 PF02589 LUD domain KFF05_17930 PF01713 Smr domain KFF05_17945 PF00004 ATPase family associated with various cellular activities (AAA) KFF05_17945 PF07724 AAA domain (Cdc48 subfamily) KFF05_17945 PF10431 C-terminal, D2-small domain, of ClpB protein KFF05_17950 PF00227 Proteasome subunit KFF05_17955 PF00475 Imidazoleglycerol-phosphate dehydratase KFF05_17965 PF00117 Glutamine amidotransferase class-I KFF05_17970 PF00977 Histidine biosynthesis protein KFF05_17975 PF00977 Histidine biosynthesis protein KFF05_17980 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KFF05_17985 PF01230 HIT domain KFF05_18000 PF13335 Magnesium chelatase, subunit ChlI C-terminal KFF05_18000 PF01078 Magnesium chelatase, subunit ChlI KFF05_18015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KFF05_18015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KFF05_18020 PF13369 Transglutaminase-like superfamily KFF05_18025 PF04972 BON domain KFF05_18030 PF02021 Uncharacterised protein family UPF0102 KFF05_18035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF05_18045 PF04055 Radical SAM superfamily KFF05_18050 PF01725 Ham1 family KFF05_18055 PF01138 3' exoribonuclease family, domain 1 KFF05_18055 PF03725 3' exoribonuclease family, domain 2 KFF05_18060 PF01628 HrcA protein C terminal domain KFF05_18065 PF01025 GrpE KFF05_18070 PF00012 Hsp70 protein KFF05_18075 PF00226 DnaJ domain KFF05_18075 PF01556 DnaJ C terminal domain KFF05_18075 PF00684 DnaJ central domain KFF05_18085 PF01113 Dihydrodipicolinate reductase, N-terminus KFF05_18085 PF05173 Dihydrodipicolinate reductase, C-terminus KFF05_18095 PF10576 Iron-sulfur binding domain of endonuclease III KFF05_18095 PF00730 HhH-GPD superfamily base excision DNA repair protein KFF05_18095 PF00633 Helix-hairpin-helix motif KFF05_18115 PF00294 pfkB family carbohydrate kinase KFF05_18120 PF00009 Elongation factor Tu GTP binding domain KFF05_18120 PF03144 Elongation factor Tu domain 2 KFF05_18120 PF00679 Elongation factor G C-terminus KFF05_18125 PF00484 Carbonic anhydrase KFF05_18130 PF07690 Major Facilitator Superfamily KFF05_18140 PF01740 STAS domain KFF05_18140 PF00916 Sulfate permease family KFF05_18150 PF00719 Inorganic pyrophosphatase KFF05_18155 PF01661 Macro domain KFF05_18160 PF00390 Malic enzyme, N-terminal domain KFF05_18160 PF03949 Malic enzyme, NAD binding domain KFF05_18160 PF01515 Phosphate acetyl/butaryl transferase KFF05_18165 PF05190 MutS family domain IV KFF05_18165 PF00488 MutS domain V KFF05_18165 PF01624 MutS domain I KFF05_18165 PF05188 MutS domain II KFF05_18165 PF05192 MutS domain III KFF05_18170 PF08335 GlnD PII-uridylyltransferase KFF05_18170 PF01909 Nucleotidyltransferase domain KFF05_18170 PF01966 HD domain KFF05_18175 PF03023 Lipid II flippase MurJ KFF05_18180 PF00579 tRNA synthetases class I (W and Y) KFF05_18185 PF01106 NifU-like domain KFF05_18190 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KFF05_18195 PF01522 Polysaccharide deacetylase KFF05_18200 PF00881 Nitroreductase family KFF05_18210 PF00814 Glycoprotease family KFF05_18220 PF05443 ROS/MUCR transcriptional regulator protein KFF05_18225 PF01475 Ferric uptake regulator family KFF05_18230 PF01938 TRAM domain KFF05_18230 PF04055 Radical SAM superfamily KFF05_18230 PF00919 Uncharacterized protein family UPF0004 KFF05_18235 PF02562 PhoH-like protein KFF05_18240 PF02130 Uncharacterized protein family UPF0054 KFF05_18245 PF00571 CBS domain KFF05_18245 PF03471 Transporter associated domain KFF05_18250 PF00795 Carbon-nitrogen hydrolase KFF05_18255 PF02773 S-adenosylmethionine synthetase, C-terminal domain KFF05_18255 PF00438 S-adenosylmethionine synthetase, N-terminal domain KFF05_18255 PF02772 S-adenosylmethionine synthetase, central domain KFF05_18260 PF02390 Putative methyltransferase KFF05_18265 PF02576 RimP N-terminal domain KFF05_18265 PF17384 RimP C-terminal SH3 domain KFF05_18270 PF13184 NusA-like KH domain KFF05_18270 PF08529 NusA N-terminal domain KFF05_18270 PF00575 S1 RNA binding domain KFF05_18280 PF04760 Translation initiation factor IF-2, N-terminal region KFF05_18280 PF00009 Elongation factor Tu GTP binding domain KFF05_18280 PF03144 Elongation factor Tu domain 2 KFF05_18280 PF11987 Translation-initiation factor 2 KFF05_18280 PF08364 Bacterial translation initiation factor IF-2 associated region KFF05_18285 PF02033 Ribosome-binding factor A KFF05_18290 PF09157 Pseudouridine synthase II TruB, C-terminal KFF05_18290 PF16198 tRNA pseudouridylate synthase B C-terminal domain KFF05_18290 PF01509 TruB family pseudouridylate synthase (N terminal domain) KFF05_18295 PF00312 Ribosomal protein S15 KFF05_18300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KFF05_18300 PF00013 KH domain KFF05_18300 PF00575 S1 RNA binding domain KFF05_18300 PF01138 3' exoribonuclease family, domain 1 KFF05_18300 PF03725 3' exoribonuclease family, domain 2 KFF05_18305 PF07977 FabA-like domain KFF05_18310 PF02801 Beta-ketoacyl synthase, C-terminal domain KFF05_18310 PF00109 Beta-ketoacyl synthase, N-terminal domain KFF05_18325 PF02915 Rubrerythrin KFF05_18345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF05_18345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF05_18350 PF04715 Anthranilate synthase component I, N terminal region KFF05_18350 PF00425 chorismate binding enzyme KFF05_18355 PF01063 Amino-transferase class IV KFF05_18365 PF00899 ThiF family KFF05_18370 PF00291 Pyridoxal-phosphate dependent enzyme KFF05_18375 PF02082 Transcriptional regulator KFF05_18380 PF00692 dUTPase KFF05_18385 PF04127 DNA / pantothenate metabolism flavoprotein KFF05_18385 PF02441 Flavoprotein KFF05_18395 PF03109 ABC1 family KFF05_18400 PF01209 ubiE/COQ5 methyltransferase family KFF05_18405 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KFF05_18405 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KFF05_18405 PF06827 Zinc finger found in FPG and IleRS KFF05_18415 PF00378 Enoyl-CoA hydratase/isomerase KFF05_18420 PF01649 Ribosomal protein S20